RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THSD7A (Homo sapiens)

Ensembl gene IDs: ENSG00000005108

Ensembl transcript IDs: ENST00000408005.2, ENST00000423059.9, ENST00000480061.1, ENST00000497575.1, ENST00000617773.1

Found 823 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGATaGAGGCAGGAGGATATGGGATGGTCTAAAGCAAGTGTAGGCATG +
Preference number: 1 (lower is better)
Translates to: LPHCLVVWNVNKDSR*RQEDMGWSKASVGM
Trigger: CATGCCTACACTTGCTTTAGACCATCCCATATCCTCCTGCCTCCATCTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CCA 90 bp TGTATGGTACTGAAAAGTACAGTCCTCCCTCACTGTCTTGTGGTGTaGAATGTGAACAAAGACTCGAGATGGAGGCAGGAGGATATGGGA +
Preference number: 1 (lower is better)
Translates to: CMVLKSTVLPHCLVV*NVNKDSRWRQEDMG
Trigger: TCCCATATCCTCCTGCCTCCATCTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTTTTCAGTACCATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CCA 90 bp TGGAATGTGAACAAAGACTCGAGATGGAGGCAGGAGGATATGGGATaGTCTAAAGCAAGTGTAGGCATGGACATTTTTACAGAAAAGGGC +
Preference number: 1 (lower is better)
Translates to: WNVNKDSRWRQEDMG*SKASVGMDIFTEKG
Trigger: GCCCTTTTCTGTAAAAATGTCCATGCCTACACTTGCTTTAGACCATCCCATATCCTCCTGCCTCCATCTCGAGTCTTTGTTCACATTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR TCA 90 bp ATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAATAGCTaGTTTCATCTTGCTGCCATCCAAACTGAACTTTACTCTCTTCAG +
Preference number: 1 (lower is better)
Translates to: MAAVMRKCVYSRCNS*FHLAAIQTELYSLQ
Trigger: CTGAAGAGAGTAAAGTTCAGTTTGGATGGCAGCAAGATGAAATCAGCTATTACACCTGCTGTACACACACTTCCTCATCACTGCAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR TCA 90 bp AATCCACACAGTTTGGATACATTTGTTGTGGCCTCTGGACATCTATaGAGTCAGAAAGCCGAAACTGGTTGTTGCCAGGAAAAGTTATAT +
Preference number: 1 (lower is better)
Translates to: NPHSLDTFVVASGHL*SQKAETGCCQEKLY
Trigger: ATATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTCTGACTTCATAGATGTCCAGAGGCCACAACAAATGTATCCAAACTGTGTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR GCA 90 bp GGTAATATATTTATAAACAGGAGATCCCAGATCATTTGGGAATTGTaGTTCTCATGTACTATTGAGACCCACGTCAGCTTTAGAACAGGC +
Preference number: 1 (lower is better)
Translates to: GNIFINRRSQIIWEL*FSCTIETHVSFRTG
Trigger: GCCTGTTCTAAAGCTGACGTGGGTCTCAATAGTACATGAGAAGCACAATTCCCAAATGATCTGGGATCTCCTGTTTATAAATATATTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR TCA 90 bp TCTGAAATGCAGGTCAATAAAATCTACCATCGACCACCAAGATGCTaGATTTATTCAGTGGATTTTCTGCTTAGCTTAGAGTTTATTTGT +
Preference number: 1 (lower is better)
Translates to: SEMQVNKIYHRPPRC*IYSVDFLLSLEFIC
Trigger: ACAAATAAACTCTAAGCTAAGCAGAAAATCCACTGAATAAATTCAGCATCTTGGTGGTCGATGGTAGATTTTATTGACCTGCATTTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CAA 90 bp ACAGGAGATCCCAGATCATTTGGGAATTGTGCTTCTCATGTACTATaGAGACCCACGTCAGCTTTAGAACAGGCTCTCCCTTCTGTATGG +
Preference number: 2 (lower is better)
Translates to: TGDPRSFGNCASHVL*RPTSALEQALPSVW
Trigger: CCATACAGAAGGGAGAGCCTGTTCTAAAGCTGACGTGGGTCTCAATAGTACATGAGAAGCACAATTCCCAAATGATCTGGGATCTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGCCTCTGGACATCTATaGAGTCAGAAAGCCGAAACT +
Preference number: 2 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCASGHL*SQKAET
Trigger: AGTTTCGGCTTTCTGACTTCATAGATGTCCAGAGGC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGAAGAGGCAGTTTCTATaGCAATACTGGTTAAGCGCC +
Preference number: 2 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEKRQFL*QYWLSA
Trigger: GGCGCTTAACCAGTATTGCCATAGAAACTGCCTCTT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTTTCTATGGCAATACTaGTTAAGCGCCTATCGTGCT +
Preference number: 2 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEFLWQY*LSAYRA
Trigger: AGCACGATAGGCGCTTAACCAGTATTGCCATAGAAA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGTTAAGCGCCTATCGTaGTGCACTAATATAGTGCAA +
Preference number: 2 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCVKRLS*CTNIVQ
Trigger: TTGCACTATATTAGTGCAGCACGATAGGCGCTTAAC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGATTTGTTGTGGCCTCTaGACATCTATGAAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEICCGL*TSMKSE
Trigger: TTCTGACTTCATAGATGTCCAGAGGCCACAACAAAT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGATCAGGCATCCTAACTaGCCAATTCCACCATTATTT +
Preference number: 2 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEIRHPN*PIPPLF
Trigger: AAATAATGGTGGAATTGGCCAGTTAGGATGCCTGAT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAGCAGGTGTAATAGCTaGTTTCATCTTGCTGCCATC +
Preference number: 2 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPSRCNS*FHLAAI
Trigger: GATGGCAGCAAGATGAAATCAGCTATTACACCTGCT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTTTGACCAGTGGATTTaGTGTAAATCAGGATGTTCA +
Preference number: 2 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEFDQWI*CKSGCS
Trigger: TGAACATCCTGATTTACACCAAATCCACTGGTCAAA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTTTGAAATAACTGCCTaGAAGACAGACATTCAATCT +
Preference number: 2 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEFEITA*KTDIQS
Trigger: AGATTGAATGTCTGTCTTGCAGGCAGTTATTTCAAA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTTTCTATGGCAATACTaGTTAAGCGCCTATCGTGCT +
Preference number: 2 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPFLWQY*LSAYRA
Trigger: AGCACGATAGGCGCTTAACCAGTATTGCCATAGAAA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGAAACTCCTAATACTGTaGCCTAAAGACATGTACATT +
Preference number: 2 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEKLLIL*PKDMYI
Trigger: AATGTACATGTCTTTAGGCCACAGTATTAGGAGTTT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGCCTCTGGACATCTATaGAGTCAGAAAGCCGAAACT +
Preference number: 2 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIASGHL*SQKAET
Trigger: AGTTTCGGCTTTCTGACTTCATAGATGTCCAGAGGC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCGACCACCAAGATGCTaGATTTATTCAGTGGATTTT +
Preference number: 2 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPRPPRC*IYSVDF
Trigger: AAAATCCACTGAATAAATTCAGCATCTTGGTGGTCG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATCAGAAAGCCGAAACTaGTTGTTGCCAGGAAAAGTT +
Preference number: 2 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKSESRN*LLPGKV
Trigger: AACTTTTCCTGGCAACAACCAGTTTCGGCTTTCTGA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCTTAAATATCTCCAGTaGCAGTATGATTTTCACTCT +
Preference number: 2 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCLKYLQ*QYDFHS
Trigger: AGAGTGAAAATCATACTGCCACTGGAGATATTTAAG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGAAGAGGCAGTTTCTATaGCAATACTGGTTAAGCGCC +
Preference number: 2 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQKRQFL*QYWLSA
Trigger: GGCGCTTAACCAGTATTGCCATAGAAACTGCCTCTT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTGCTGCCATCCAAACTaGACTTTACTCTCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNCCHPN*TLLSSG
Trigger: TCCTGAAGAGAGTAAAGTTCAGTTTGGATGGCAGCA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAAAGACTATGGATTTTaGAATAACTGCCTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPKDYGF*NNCLQD
Trigger: GTCTTGCAGGCAGTTATTTCAAAATCCATAGTCTTT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCAATTTCACAATGGCTaGAGTGATGAGGAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQQFHNG*SDEEVC
Trigger: ACACACTTCCTCATCACTGCAGCCATTGTGAAATTG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATGGATACATTTGTTGTaGCCTCTGGACATCTATGAA +
Preference number: 2 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKWIHLL*PLDIYE
Trigger: TTCATAGATGTCCAGAGGCCACAACAAATGTATCCA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGAAGCGCCTATCGTGCTaGACTAATATAGTGCAAAAA +
Preference number: 2 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQKRLSC*TNIVQK
Trigger: TTTTTGCACTATATTAGTGCAGCACGATAGGCGCTT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCAGGATACAAGAACTTaGAAATGTCTTCATGCCACT +
Preference number: 2 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQQDTRT*KCLHAT
Trigger: AGTGGCATGAAGACATTTGCAAGTTCTTGTATCCTG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGATTTGTTGTGGCCTCTaGACATCTATGAAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQICCGL*TSMKSE
Trigger: TTCTGACTTCATAGATGTCCAGAGGCCACAACAAAT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATTAATCCACACAGTTTaGATACATTTGTTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKLIHTV*IHLLWP
Trigger: AGGCCACAACAAATGTATCCAAACTGTGTGGATTAA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCTTAAATATCTCCAGTaGCAGTATGATTTTCACTCT +
Preference number: 2 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPLKYLQ*QYDFHS
Trigger: AGAGTGAAAATCATACTGCCACTGGAGATATTTAAG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCAGAAAGCCGAAACTaGTTGTTGCCAGGAAAAGTT +
Preference number: 2 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSESRN*LLPGKV
Trigger: AACTTTTCCTGGCAACAACCAGTTTCGGCTTTCTGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CAA 90 bp TTTGGTAATATATTTATAAACAGGAGATCCCAGATCATTTGGGAATaGTGCTTCTCATGTACTATTGAGACCCACGTCAGCTTTAGAACA +
Preference number: 2 (lower is better)
Translates to: FGNIFINRRSQIIWE*CFSCTIETHVSFRT
Trigger: TGTTCTAAAGCTGACGTGGGTCTCAATAGTACATGAGAAGCACAATTCCCAAATGATCTGGGATCTCCTGTTTATAAATATATTACCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTATAATTCTCACGGTTaGTGGTCTGTATATAAGTGG +
Preference number: 2 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNYNSHG*WSVYKW
Trigger: CCACTTATATACAGACCATCAACCGTGAGAATTATA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATATAATTCTCACGGTTaGTGGTCTGTATATAAGTGG +
Preference number: 2 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIYNSHG*WSVYKW
Trigger: CCACTTATATACAGACCATCAACCGTGAGAATTATA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATAAAGACTATGGATTTTaGAATAACTGCCTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNKDYGF*NNCLQD
Trigger: GTCTTGCAGGCAGTTATTTCAAAATCCATAGTCTTT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCAGGATACAAGAACTTaGAAATGTCTTCATGCCACT +
Preference number: 2 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNQDTRT*KCLHAT
Trigger: AGTGGCATGAAGACATTTGCAAGTTCTTGTATCCTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTTTGAAATAACTGCCTaGAAGACAGACATTCAATCT +
Preference number: 2 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQFEITA*KTDIQS
Trigger: AGATTGAATGTCTGTCTTGCAGGCAGTTATTTCAAA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACATCAGGCATCCTAACTaGCCAATTCCACCATTATTT +
Preference number: 2 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNIRHPN*PIPPLF
Trigger: AAATAATGGTGGAATTGGCCAGTTAGGATGCCTGAT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTTAATCCACACAGTTTaGATACATTTGTTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNLIHTV*IHLLWP
Trigger: AGGCCACAACAAATGTATCCAAACTGTGTGGATTAA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR GCA 72 bp CTCACACACCAGTTTCTGATACCTGAAATCCTGTCCTaGAGCCAGGGCCACCTGAGGGCAGGACCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: LTHQFLIPEILS*SQGHLRAGPGE
Trigger: CTCCCCAGGTCCTGCCCTCAGGTGGCCCTGGCTGCAGGACAGGATTTCAGGTATCAGAAACTGGTGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CCA 72 bp CTGAAAAGTACAGTCCTCCCTCACTGTCTTGTGGTGTaGAATGTGAACAAAGACTCGAGATGGAGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: LKSTVLPHCLVV*NVNKDSRWRQE
Trigger: CTCCTGCCTCCATCTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR TCA 72 bp TCAGCTTTAGAACAGGCTCTCCCTTCTGTATGGTACTaGAAAGTACAGTCCTCCCTCACTGTCTTGTGGTGT +
Preference number: 3 (lower is better)
Translates to: SALEQALPSVWY*KVQSSLTVLWC
Trigger: ACACCACAAGACAGTGAGGGAGGACTGTACTTTTCAGTACCATACAGAAGGGAGAGCCTGTTCTAAAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CCA 72 bp TGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGATaGAGGCAGGAGGATATGGGATGGTCTAAAGCAAGT +
Preference number: 3 (lower is better)
Translates to: CLVVWNVNKDSR*RQEDMGWSKAS
Trigger: ACTTGCTTTAGACCATCCCATATCCTCCTGCCTCCATCTCGAGTCTTTGTTCACATTCCACACCACAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGATAGCTGATTTCATCTaGCTGCCATCCAAACTGAAC +
Preference number: 3 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEIADFI*LPSKLN
Trigger: GTTCAGTTTGGATGGCAGCAAGATGAAATCAGCTAT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR TCA 72 bp ATTTACCTTGAAATGCCCAGGAACTTAACAGGGGTCTaGTTAAGCTACAATGACCACTGCCACCTACCTGAG +
Preference number: 3 (lower is better)
Translates to: IYLEMPRNLTGV*LSYNDHCHLPE
Trigger: CTCAGGTAGGTGGCAGTGGTCATTGTAGCTTAATCAGACCCCTGTTAAGTTCCTGGGCATTTCAAGGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGAAAGCCGAAACTGGTaGTTGCCAGGAAAAGTTATA +
Preference number: 3 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCESRNW*LPGKVI
Trigger: TATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CCA 72 bp AACAAAGACTCGAGATGGAGGCAGGAGGATATGGGATaGTCTAAAGCAAGTGTAGGCATGGACATTTTTACA +
Preference number: 3 (lower is better)
Translates to: NKDSRWRQEDMG*SKASVGMDIFT
Trigger: TGTAAAAATGTCCATGCCTACACTTGCTTTAGACCATCCCATATCCTCCTGCCTCCATCTCGAGTCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGGCAAAGTTGAGAAGTaGCAACATAGACCTTGTGGA +
Preference number: 3 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPGKVEK*QHRPCG
Trigger: TCCACAAGGTCTATGTTGCAACTTCTCAACTTTGCC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCCTTTATTCATTTCTTaGACCAGTGGATTTGGTGTA +
Preference number: 3 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEPLFIS*TSGFGV
Trigger: TACACCAAATCCACTGGTCAAAGAAATGAATAAAGG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR TCA 72 bp GTGATGAGGAAGTGTGTGTACAGCAGGTGTAATAGCTaGTTTCATCTTGCTGCCATCCAAACTGAACTTTAC +
Preference number: 3 (lower is better)
Translates to: VMRKCVYSRCNS*FHLAAIQTELY
Trigger: GTAAAGTTCAGTTTGGATGGCAGCAAGATGAAATCAGCTATTACACCTGCTGTACACACACTTCCTCATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR GCA 72 bp GCAGTTTCTATGGCAATACTGGTTAAGCGCCTATCGTaGTGCACTAATATAGTGCAAAAATGTGCCTTCCAT +
Preference number: 3 (lower is better)
Translates to: AVSMAILVKRLS*CTNIVQKCAFH
Trigger: ATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCGCTTAACCAGTATTGCCATAGAAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAACAGTTTGGATACATTaGTTGTGGCCTCTGGACATC +
Preference number: 3 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKTVWIH*LWPLDI
Trigger: GATGTCCAGAGGCCACAACAAATGTATCCAAACTGT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGTCTTCATGCCACTCTaGGCACAGATGTCTTCATCC +
Preference number: 3 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNVFMPL*AQMSSS
Trigger: GGATGAAGACATCTGTGCCAAGAGTGGCATGAAGAC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGGCAAAGTTGAGAAGTaGCAACATAGACCTTGTGGA +
Preference number: 3 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNGKVEK*QHRPCG
Trigger: TCCACAAGGTCTATGTTGCAACTTCTCAACTTTGCC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGAGCAGAATGGCAAAGTaGAGAAGTTGCAACATAGAC +
Preference number: 3 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQSRMAK*RSCNID
Trigger: GTCTATGTTGCAACTTCTCAACTTTGCCATTCTGCT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR GCA 72 bp GTTTCTATGGCAATACTGGTTAAGCGCCTATCGTGCTaGACTAATATAGTGCAAAAATGTGCCTTCCATATA +
Preference number: 3 (lower is better)
Translates to: VSMAILVKRLSC*TNIVQKCAFHI
Trigger: TATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCGCTTAACCAGTATTGCCATAGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGAAAGCCGAAACTGGTaGTTGCCAGGAAAAGTTATA +
Preference number: 3 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNESRNW*LPGKVI
Trigger: TATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACACAGTTTGGATACATTaGTTGTGGCCTCTGGACATC +
Preference number: 3 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNTVWIH*LWPLDI
Trigger: GATGTCCAGAGGCCACAACAAATGTATCCAAACTGT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTCCAGCATTCTTACTTaGGAGAGAGACAAGAAGTCT +
Preference number: 3 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSSILT*ERDKKS
Trigger: AGACTTCTTGTCTCTCTCCAAAGTAAGAATGCTGGA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATATGCAGGCAACCAGTTaGAAAATCAGGGAAAGTAGA +
Preference number: 3 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNMQATS*KIRESR
Trigger: TCTACTTTCCCTGATTTTCAAACTGGTTGCCTGCAT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATCAGGATACAAGAACTaGCAAATGTCTTCATGCCAC +
Preference number: 3 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFISGYKN*QMSSCH
Trigger: GTGGCATGAAGACATTTGCAAGTTCTTGTATCCTGA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCCAAAATAGCCAGATaGCTACGTTCTCCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSKIAR*LRSPLS
Trigger: GGAAAGAGGAGAACGTAGCAATCTGGCTATTTTGGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACATGCAGGCAACCAGTTaGAAAATCAGGGAAAGTAGA +
Preference number: 3 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNMQATS*KIRESR
Trigger: TCTACTTTCCCTGATTTTCAAACTGGTTGCCTGCAT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCAGGATACAAGAACTaGCAAATGTCTTCATGCCAC +
Preference number: 3 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSGYKN*QMSSCH
Trigger: GTGGCATGAAGACATTTGCAAGTTCTTGTATCCTGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACATAGCTGATTTCATCTaGCTGCCATCCAAACTGAAC +
Preference number: 3 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNIADFI*LPSKLN
Trigger: GTTCAGTTTGGATGGCAGCAAGATGAAATCAGCTAT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTGCCTGAAAATGGTATaGCTTTTTAATGGCACCTTT +
Preference number: 3 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQCLKMV*LFNGTF
Trigger: AAAGGTGCCATTAAAAAGCAATACCATTTTCAGGCA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR TCA 72 bp TTTGGTGTAAATCAGGATGTTCACACTCTGAGTGAGTaGCACTTTGATTCTAATAGGGAAGGAAATATAGGA +
Preference number: 3 (lower is better)
Translates to: FGVNQDVHTLSE*HFDSNREGNIG
Trigger: TCCTATATTTCCTTCCCTATTAGAATCAAAGTGTCACTCACTCAGAGTGTGAACATCCTGATTTACACCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAAGATTGCTTCAAATTTaGCCAGTGAGAAAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIRLLQI*PVRKAK
Trigger: TTTTGCCTTTCTCACTGGCAAAATTTGAAGCAATCT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATAGATTGCTTCAAATTTaGCCAGTGAGAAAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNRLLQI*PVRKAK
Trigger: TTTTGCCTTTCTCACTGGCAAAATTTGAAGCAATCT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTGCCTGAAAATGGTATaGCTTTTTAATGGCACCTTT +
Preference number: 3 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNCLKMV*LFNGTF
Trigger: AAAGGTGCCATTAAAAAGCAATACCATTTTCAGGCA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACATAATAACCTTCCCTTaGTCCAAAATAGCCAGATTG +
Preference number: 3 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNIITFP*SKIARL
Trigger: CAATCTGGCTATTTTGGACAAAGGGAAGGTTATTAT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGGGGGCGCCACCACATaGCGCGTCCGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEGGATT*RVRCWS
Trigger: GCTCCAGCACCGGACGCGTCATGTGGTGGCGCCCCC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCGGACGCCCAGCGCCTaGCTTGCAGCCCCATGCCGC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLERTPSA*LAAPCR
Trigger: GCGGCATGGGGCTGCAAGCCAGGCGCTGGGCGTCCG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTGGCGGGGATGCTGCTaGCGCTGCCATTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEWRGCC*RCHSSQ
Trigger: CTGCGAGGAATGGCAGCGGCAGCAGCATCCCCGCCA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGGGGCATTGAGCAGGTaGTCCAGGGCCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEGALSR*SRAPHA
Trigger: TGCATGTGGGGCCCTGGAGCACCTGCTCAATGCCCC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCGCTGCCGCAGGTCTTaGAGCATTCGGACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLERCRRS*SIRTRQ
Trigger: CTGCCTGGTCCGAATGCTCCAAGACCTGCGGCAGCG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCGGCCCCCGTTGGCTaGCAGCTGAATGATGACCCG +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESAPVG*QLNDDP
Trigger: CGGGTCATCATTCAGCTGCCAGCCAACGGGGGCCGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGGGATCTGGCAGGCCTaGGTAAGGGCTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCGIWQA*VRAGTG
Trigger: CCCTGTGCCAGCCCTTACCCAGGCCTGCCAGATCCC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGCCCAGCGCCTGGCTTaGAGCCCCATGCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKAQRLA*SPMPPA
Trigger: TGCAGGCGGCATGGGGCTGCAAGCCAGGCGCTGGGC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGGAATGAGGCAAGCCTaGTCCAGGAGAGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEGMRQA*SRRGLG
Trigger: GCCCAAGCCTCTCCTGGAGCAGGCTTGCCTCATTCC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCCACACTGGGCCTCCTaGACTTGGCATGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEPHWAS*TWHGDH
Trigger: GTGGTCTCCATGCCAAGTGCAGGAGGCCCAGTGTGG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCTGTCGGCATCAGGCTaGCTCATCACCAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELSASG*LITKQP
Trigger: GGGCTGCTTGGTGATGAGCCAGCCTGATGCCGACAG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTACACCTCTCGGGTCTaGATGCCCCCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEYTSRV*MPPPQR
Trigger: CCTCTGTGGAGGGGGCATCCAGACCCGAGAGGTGTA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTCCTGGCAGGGGATCTaGCAGGCCTGGGTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCSWQGI*QAWVRA
Trigger: AGCCCTTACCCAGGCCTGCCAGATCCCCTGCCAGGA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCTTGTCCTGCTGACTaGGCAAAGGGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESCPAD*AKGPHG
Trigger: GCCGTGTGGACCCTTTGCTCAGTCAGCAGGACAAGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCCGTTGGCTGGCAGCTaGATGATGACCCGATGCCTA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEPLAGS*MMTRCL
Trigger: TAGGCATCGGGTCATCATTCAGCTGCCAGCCAACGG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTGCTCCAGGGCTCTGTaGCCCATAGGTACTGGTTGC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLECSRAL*PIGTGC
Trigger: GCAACCAGTACCTATGGGTCACAGAGCCCTGGAGCA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGGTCCTTCCCCGTCCTaGTGGGTTACTGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCGPSPS*WVTGGL
Trigger: CAACCCTCCAGTAACCCAGCAGGACGGGGAAGGACC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTGGCGGGGATGCTGCTaGCGCTGCCATTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPWRGCC*RCHSSQ
Trigger: CTGCGAGGAATGGCAGCGGCAGCAGCATCCCCGCCA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGCCCAGCGCCTGGCTTaGAGCCCCATGCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQAQRLA*SPMPPA
Trigger: TGCAGGCGGCATGGGGCTGCAAGCCAGGCGCTGGGC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACCTCTCGGGTCTGGATaGCCCCTCCACAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKPLGSG*PLHRGP
Trigger: CGGCCCTCTGTGGAGGGGGCATCCAGACCCGAGAGG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTCCCACAGGACTTGCTaGAGCGCGACCAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCSHRTC*SATSWT
Trigger: GGTCCAACTGGTCGCGCTGCAGCAAGTCCTGTGGGA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCCACACTGGGCCTCCTaGACTTGGCATGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCPHWAS*TWHGDH
Trigger: GTGGTCTCCATGCCAAGTGCAGGAGGCCCAGTGTGG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCCTGAAATCCTGTCCTaGAGCCAGGGCCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCPEILS*SQGHLR
Trigger: CCTCAGGTGGCCCTGGCTGCAGGACAGGATTTCAGG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCTGTCGGCATCAGGCTaGCTCATCACCAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCLSASG*LITKQP
Trigger: GGGCTGCTTGGTGATGAGCCAGCCTGATGCCGACAG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCACAGGCCACAGGGATaGGGAAGATGGCATCTCTGC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEHRPQG*GRWHLC
Trigger: GCAGAGATGCCATCTTCCCCATCCCTGTGGCCTGTG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTGGGCCTCCTGCACTTaGCATGGAGACCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCWASCT*HGDHWP
Trigger: TGGCCAGTGGTCTCCATGCCAAGTGCAGGAGGCCCA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCACCTGGGCAAGGCTaGCTGCAGGATTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESPGQG*LQDSSR
Trigger: TCTGGAGGAATCCTGCAGCCAGCCTTGCCCAGGTGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCCGTTGGCTGGCAGCTaGATGATGACCCGATGCCTA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCPLAGS*MMTRCL
Trigger: TAGGCATCGGGTCATCATTCAGCTGCCAGCCAACGG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGACCAGCTGGTCAATTaGCAGTCATCCTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCDQLVN*QSSWQG
Trigger: CCCCTGCCAGGATGACTGTCAATTGACCAGCTGGTC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTGCTCCAGGGCTCTGTaGCCCATAGGTACTGGTTGC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCCSRAL*PIGTGC
Trigger: GCAACCAGTACCTATGGGTCACAGAGCCCTGGAGCA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGGTGCTGGAGCCCGCTaGCGCAGGTCTTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPGAGAR*RRSWSI
Trigger: AATGCTCCAAGACCTGCGGCAGCGGGCTCCAGCACC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAGAGGGCCGTCTGGTTaGCGCGCCTCTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPRGPSG*RASCPA
Trigger: AGCAGGACAAGAGGCGCGGCAACCAGACGGCCCTCT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTTGGCACGCTTGAGGTaGCTCACAGGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELARLR*LTGLLF
Trigger: GAAGAGAAGGCCTGTGAGGCACCTCAAGCGTGCCAA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGACAAGTAATGGCTCTTaGCTGTCGCCCAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLETSNGS*LSPRPT
Trigger: TGTGGGCCTGGGCGACAGGCAAGAGCCATTACTTGT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGGGTTACTGGAGGGTTaGGTTGGATGTACAGCCCGA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEGLLEG*VGCTAR
Trigger: TCGGGCTGTACATCCAACCCAACCCTCCAGTAACCC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCGGACGCCCAGCGCCTaGCTTGCAGCCCCATGCCGC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNRTPSA*LAAPCR
Trigger: GCGGCATGGGGCTGCAAGCCAGGCGCTGGGCGTCCG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCGCATGGACTGGATTaGCACACCTGGAACTCCGTC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESHGLD*HTWNSV
Trigger: GACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCTTACTTGTCGGGAGTaGGGCATTGAGCAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELTCRE*GIEQVL
Trigger: GAGCACCTGCTCAATGCCCCACTCCCGACAAGTAAG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACCACAGAGGGCCGTCTaGTTGCCGCGCCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKPQRAV*LPRLLS
Trigger: GGACAAGAGGCGCGGCAACCAGACGGCCCTCTGTGG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTCCTGGCAGGGGATCTaGCAGGCCTGGGTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPSWQGI*QAWVRA
Trigger: AGCCCTTACCCAGGCCTGCCAGATCCCCTGCCAGGA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCAGTACGAGTGGGGTTaGCTACACGGTGGGTTACAA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEQYEWG*LHGGLQ
Trigger: TTGTAACCCACCGTGTAGTCAACCCCACTCGTACTG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGTCCATCCCTCCACATaGGCACACCACACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPVHPST*AHHTAL
Trigger: GAGGGCTGTGTGGTGTGCTCATGTGGAGGGATGGAC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACATGCAGGCTGTACCTaGGCTCCTCGGCCTCGCATG +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKHAGCT*APRPRM
Trigger: CATGCGAGGCCGAGGAGCTCAGGTACAGCCTGCATG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCCTGGCACTCTTTGGTaGTCACACAGGACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCPGTLW*SHRTGR
Trigger: CCTTCCAGTCCTGTGTGATCACCAAAGAGTGCCAGG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCTGATGGGATCAGCTaGCCTTTGCCGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESDGIS*PLPETA
Trigger: AGCAGTTTCCGGCAAAGGTCAGCTGATCCCATCAGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCCTTACACGAGTGCCTaGAGGGGACACCATGTCATG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCPYTSA*RGHHVM
Trigger: CATGACATGGTGTCCCCTGCAGGCACTCGTGTAAGG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGTGTCCTTACACGAGTaGCTGCAGGGGACACCATGT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCVSLHE*LQGTPC
Trigger: ACATGGTGTCCCCTGCAGGCACTCGTGTAAGGACAC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCTCTCGGGTCTGGATaGCCCCTCCACAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPLGSG*PLHRGP
Trigger: CGGCCCTCTGTGGAGGGGGCATCCAGACCCGAGAGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAGGTTTTCGTTGGCCTaGACGCAGTACACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCRFSLA*TQYTSR
Trigger: CCGAGAGGTGTACTGCGTGCAGGCCAACGAAAACCT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTTGGCACGCTTGAGGTaGCTCACAGGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCLARLR*LTGLLF
Trigger: GAAGAGAAGGCCTGTGAGGCACCTCAAGCGTGCCAA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCTCACTTTTCGGGTTTaGACGCCCTCTCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELTFRV*TPSPQF
Trigger: GAACTGTGGAGAGGGCGTGCAAACCCGAAAAGTGAG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTCCACAGATAGAGGGTaGGCGCCTCCGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQSTDRG*APPPRP
Trigger: AGGGCGAGGCGGAGGCGCCCACCCTCTATCTGTGGA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCTTACTTGTCGGGAGTaGGGCATTGAGCAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCLTCRE*GIEQVL
Trigger: GAGCACCTGCTCAATGCCCCACTCCCGACAAGTAAG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCAGGGATGGGGAAGATaGCATCTCTGCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCQGWGR*HLCTAV
Trigger: GACAGCTGTGCAGAGATGCCATCTTCCCCATCCCTG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGGCCTGGGTAAGGGCTaGCACAGGGCCTGCATACTG +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKGLGKG*HRACIL
Trigger: CAGTATGCAGGCCCTGTGCCAGCCCTTACCCAGGCC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCAGGGGCATCTCTTCTaGGTCACAGAGGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEQGHLF*VTEVIL
Trigger: GAGGATTACCTCTGTGACCCAGAAGAGATGCCCCTG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCAAATAACAGTCACCTaGGCAAGGCTGGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEQITVT*ARLAAG
Trigger: TCCTGCAGCCAGCCTTGCCCAGGTGACTGTTATTTG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGTCCATCCCTCCACATaGGCACACCACACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKVHPST*AHHTAL
Trigger: GAGGGCTGTGTGGTGTGCTCATGTGGAGGGATGGAC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCTTGCTGGCAAGGAATaGGGCAAGCCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPLAGKE*GKPAPG
Trigger: TCCTGGAGCAGGCTTGCCTCATTCCTTGCCAGCAAG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGCAGGGGCTCCACTCTaGCCACTCGGAAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQAGAPL*PLGNLA
Trigger: TGCCAGGTTTCCGAGTGGTCAGAGTGGAGCCCCTGC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTATGCACACAACCTCTTaGACTTGCGTGCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCMHTTS*TCVPGP
Trigger: TGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCAT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGTTGAAGGACGATACTaGGGTGTCCTCAATGCACTG +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEVEGRY*GVLNAL
Trigger: CAGTGCATTGAGGACACCTCAGTATCGTCCTTCAAC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCACACCTGTGCCTGGTTaGCATGGTCCAGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPTPVPG*HGPVWG
Trigger: GCCCCAAACTGGACCATGTCAACCAGGCACAGGTGT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423059.9
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGCCTTCTCACTCAGCTaGCATGTACTCCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEAFSLS*HVLQSV
Trigger: AACAGACTGGAGTACATGTCAGCTGAGTGAGAAGGC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGACCAATCAGAAAGCTaGCAGTTCACAGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEDQSES*QFTGHS
Trigger: GGAATGCCCTGTGAACTGTCAGCTTTCTGATTGGTC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGGAATGAGGCAAGCCTaGTCCAGGAGAGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKGMRQA*SRRGLG
Trigger: GCCCAAGCCTCTCCTGGAGCAGGCTTGCCTCATTCC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGGGGCATTGAGCAGGTaGTCCAGGGCCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQGALSR*SRAPHA
Trigger: TGCATGTGGGGCCCTGGAGCACCTGCTCAATGCCCC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCTTCCCGCGTCTCCTTaGTTGTCTTACTTGTCGGGA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCLPASP*LSYLSG
Trigger: TCCCGACAAGTAAGACAAGCAAGGAGACGCGGGAAG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGGCCAGAATGGATCGTaGTCGTATCTGTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEGQNGS*SYLFPF
Trigger: GAAGGGAAACAGATACGAGCACGATCCATTCTGGCC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCTCTTTTGTCCTCCATaGTGGGTAATACCACCACGG +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELFCPP*WVIPPR
Trigger: CCGTGGTGGTATTACCCACCATGGAGGACAAAAGAG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATCCACAGATAGAGGGTaGGCGCCTCCGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFISTDRG*APPPRP
Trigger: AGGGCGAGGCGGAGGCGCCCACCCTCTATCTGTGGA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCATACATCGGCCCCATaGACCAGTCTTCCACAGATA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEHTSAP*TSLPQI
Trigger: TATCTGTGGAAGACTGGTCCATGGGGCCGATGTATG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCACACAGCCCTCGTTTaGATGCCTCCGGGACCACAT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPHTALV*MPPGPH
Trigger: ATGTGGTCCCGGAGGCATCCAAACGAGGGCTGTGTG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCGCTGCCGCAGGTCTTaGAGCATTCGGACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQRCRRS*SIRTRQ
Trigger: CTGCCTGGTCCGAATGCTCCAAGACCTGCGGCAGCG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTTCTCCAGCCATACGTaGCACAGGGGACAACTCCAT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCFSSHT*HRGQLH
Trigger: ATGGAGTTGTCCCCTGTGCCACGTATGGCTGGAGAA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCACAGAGGGCCGTCTaGTTGCCGCGCCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPQRAV*LPRLLS
Trigger: GGACAAGAGGCGCGGCAACCAGACGGCCCTCTGTGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATACACCTCTCGGGTCTaGATGCCCCCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKYTSRV*MPPPQR
Trigger: CCTCTGTGGAGGGGGCATCCAGACCCGAGAGGTGTA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAGAGGAGGTTTTCGTTaGCCTGCACGCAGTACACCT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCRGGFR*PARSTP
Trigger: AGGTGTACTGCGTGCAGGCCAACGAAAACCTCCTCT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCACAGTCTTTCGGGCATaGGGCATCACAGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPTVFRA*GITGHR
Trigger: CCTGTGGCCTGTGATGCCCCATGCCCGAAAGACTGT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGGCCTGGGTAAGGGCTaGCACAGGGCCTGCATACTG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQGLGKG*HRACIL
Trigger: CAGTATGCAGGCCCTGTGCCAGCCCTTACCCAGGCC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGGGATCTGGCAGGCCTaGGTAAGGGCTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIGIWQA*VRAGTG
Trigger: CCCTGTGCCAGCCCTTACCCAGGCCTGCCAGATCCC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGGGCAGGGTTTGGACTaGTCCATCAGGGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPGQGLD*SIREGH
Trigger: ATGCCCTTCCCTGATGGACCAGTCCAAACCCTGCCC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGATAACAAGGCTTCACTaGGCAGGGTTTGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEITRLH*AGFGLV
Trigger: GACCAGTCCAAACCCTGCCCAGTGAAGCCTTGTTAT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTCACCTGGGCAAGGCTaGCTGCAGGATTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPSPGQG*LQDSSR
Trigger: TCTGGAGGAATCCTGCAGCCAGCCTTGCCCAGGTGA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACCTGAGGGCAGGACCTaGGGAGACCCTTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKPEGRT*GDPYSQ
Trigger: CTGGGAATAAGGGTCTCCCCAGGTCCTGCCCTCAGG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGCCTCTGGACATCTATaGAGTCAGAAAGCCGAAACT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEASGHL*SQKAET
Trigger: AGTTTCGGCTTTCTGACTTCATAGATGTCCAGAGGC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCATGCAGGCTGTACCTaGGCTCCTCGGCCTCGCATG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNHAGCT*APRPRM
Trigger: CATGCGAGGCCGAGGAGCTCAGGTACAGCCTGCATG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCAATGGGAAACTGCCTaGTGGTTCGTGTCCTTACAC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCQWETA*WFVSLH
Trigger: GTGTAAGGACACGAACCATCAGGCAGTTTCCCATTG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTGAGGGGCAGGGGATaGTGCAGGCCTCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLRGRG*CRPPQC
Trigger: ACATTGAGGAGGCCTGCATCATCCCCTGCCCCTCAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCATCCACCACTTTGCTaGAATCATCAGCTGACCCAT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEHPPLC*NHQLTH
Trigger: ATGGGTCAGCTGATGATTTCAGCAAAGTGGTGGATG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCCAGTTTCTGATACCTaGAATCCTGTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCPVSDT*NPVLQP
Trigger: TGGCTGCAGGACAGGATTTCAGGTATCAGAAACTGG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGGTCCTTCCCCGTCCTaGTGGGTTACTGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQGPSPS*WVTGGL
Trigger: CAACCCTCCAGTAACCCAGCAGGACGGGGAAGGACC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCAGCCCTCGTTTGGATaGCTCCGGGACCACATTCAT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPQPSFG*LRDHIH
Trigger: ATGAATGTGGTCCCGGAGGCATCCAAACGAGGGCTG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCCTTACACGAGTGCCTaGAGGGGACACCATGTCATG +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPPYTSA*RGHHVM
Trigger: CATGACATGGTGTCCCCTGCAGGCACTCGTGTAAGG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTGAGGTGTCCTCAATaGACTGGCCCCAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLRCPQ*TGPRDQ
Trigger: CTGGTCCCTGGGGCCAGTGCATTGAGGACACCTCAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGCCTGTCCTCCATCTTaGTTGCGACAAGTAATGGCT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCACPPS*LRQVMA
Trigger: AGCCATTACTTGTCGCAAGCAAGATGGAGGACAGGC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCAGGGCATTCCACCATaGAGGACGTGTTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPQGIPP*RTCSSA
Trigger: GGCAGATGAACACGTCCTGCATGGTGGAATGCCCTG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACTGGGCAAGGCTGGCTaGAGGATTCCTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKLGKAG*RIPPEP
Trigger: TGGTTCTGGAGGAATCCTGCAGCCAGCCTTGCCCAG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAGCTACAATGACCACTaGCACCTACCTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPSYNDH*HLPEGG
Trigger: CCCACCCTCAGGTAGGTGGCAGTGGTCATTGTAGCT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGGGTTGACTACACGGTaGGTTACAAGACCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPGLTTR*VTRPVG
Trigger: GCCGACAGGTCTTGTAACCCACCGTGTAGTCAACCC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCCTTCCCCGTCCTGCTaGGTTACTGGAGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQPSPSC*VTGGLG
Trigger: ACCCAACCCTCCAGTAACCCAGCAGGACGGGGAAGG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGAACTCCGTCAGGTTTaGACAGCCAGAGCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPELRQV*TARASE
Trigger: TTCGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTCGCATGGACTGGATTaGCACACCTGGAACTCCGTC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPSHGLD*HTWNSV
Trigger: GACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTCCTCGGCCTCGCATaGACTGGATTGGCACACCTG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLLGLA*TGLAHL
Trigger: CAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGTGATCACACAGGACTaGAAGGTCATTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEVITQD*KVIGSF
Trigger: GAAGCTTCCAATGACCTTCCAGTCCTGTGTGATCAC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGACCACTCGGAAACCTaGCACTCTTTGGTGATCACA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCDHSET*HSLVIT
Trigger: TGTGATCACCAAAGAGTGCCAGGTTTCCGAGTGGTC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACACAGGCCACAGGGATaGGGAAGATGGCATCTCTGC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKHRPQG*GRWHLC
Trigger: GCAGAGATGCCATCTTCCCCATCCCTGTGGCCTGTG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAACAGTCTTTCGGGCATaGGGCATCACAGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKTVFRA*GITGHR
Trigger: CCTGTGGCCTGTGATGCCCCATGCCCGAAAGACTGT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATCGGCCCCCGTTGGCTaGCAGCTGAATGATGACCCG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFISAPVG*QLNDDP
Trigger: CGGGTCATCATTCAGCTGCCAGCCAACGGGGGCCGA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTACTGTAGGCACTCATaGATTCCAGCCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCYCRHS*IPACPP
Trigger: TGGAGGACAGGCTGGAATCCATGAGTGCCTACAGTA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGGAGGCAGGAGGATATaGGATGGTCTAAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCGGRRI*DGLKQV
Trigger: CACTTGCTTTAGACCATCCCATATCCTCCTGCCTCC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGAACAAAGACTCGAGATaGAGGCAGGAGGATATGGGA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLENKDSR*RQEDMG
Trigger: TCCCATATCCTCCTGCCTCCATCTCGAGTCTTTGTT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTGCTGCCATCCAAACTaGACTTTACTCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLECCHPN*TLLSSG
Trigger: TCCTGAAGAGAGTAAAGTTCAGTTTGGATGGCAGCA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCATTGTTCGCTTCAGATaGGAAGGAGGGAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPIVRFR*EGGRAR
Trigger: ACGCGCTCTCCCTCCTTCTCATCTGAAGCGAACAAT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCAAAGTACTCACAGATaGTATCCTCCGCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEQSTHR*YPPQEC
Trigger: ACATTCCTGCGGAGGATATCATCTGTGAGTACTTTG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTTGCTGGCAAGGAATaGGGCAAGCCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLAGKE*GKPAPG
Trigger: TCCTGGAGCAGGCTTGCCTCATTCCTTGCCAGCAAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCATGGCTTCCAGTAAGTaGGGGCAGTTTCCGGTTACC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPMASSK*GQFPVT
Trigger: GGTAACCGGAAACTGCCCTCACTTACTGGAAGCCAT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCACAAGGACAATACTaGGTCTCAATCAGGGGATAC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESQGQY*VSIRGY
Trigger: GTATCCCCTGATTGAGACTCAGTATTGTCCTTGTGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCTTGTCCGCATTCCTTaGTGTCTCCTTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELVRIP*CLLVLS
Trigger: TGAAAGTACAAGGAGACATCAAGGAATGCGGACAAG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTGAGGGGCAGGGGATaGTGCAGGCCTCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFILRGRG*CRPPQC
Trigger: ACATTGAGGAGGCCTGCATCATCCCCTGCCCCTCAG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGTGAGGCCACATGTTTaGGAACATTCTGACCAAGGA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCVRPHV*EHSDQG
Trigger: TCCTTGGTCAGAATGTTCTCAAACATGTGGCCTCAC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGTGAGAAGGAAGACGTaGATTTACCTTGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEVRRKT*IYLEMP
Trigger: GGGCATTTCAAGGTAAATTCACGTCTTCCTTCTCAC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACAGCCCTCGTTTGGATaGCTCCGGGACCACATTCAT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKQPSFG*LRDHIH
Trigger: ATGAATGTGGTCCCGGAGGCATCCAAACGAGGGCTG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGGTGCTGGAGCCCGCTaGCGCAGGTCTTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNGAGAR*RRSWSI
Trigger: AATGCTCCAAGACCTGCGGCAGCGGGCTCCAGCACC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAGAGGGCCGTCTGGTTaGCGCGCCTCTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNRGPSG*RASCPA
Trigger: AGCAGGACAAGAGGCGCGGCAACCAGACGGCCCTCT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGTTTCCCAGTCTCACTaGTTTCCAGTCATAACAGGC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCVSQSH*FPVITG
Trigger: GCCTGTTATGACTGGAAAGCAGTGAGACTGGGAAAC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCCTCTTGAACTTGCGTaGCTGGACCACACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPPLELA*LDHTPF
Trigger: GAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTGAGGTGTCCTCAATaGACTGGCCCCAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFILRCPQ*TGPRDQ
Trigger: CTGGTCCCTGGGGCCAGTGCATTGAGGACACCTCAG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCTTTTCTTGTCTGCATaGCGACAGAGCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPLFLSA*RQSRRP
Trigger: AGGCCTCCTGCTCTGTCGGCATGCAGACAAGAAAAG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTATGACTTTTCTTGTCTaGATGCCGACAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCMTFLV*MPTEQE
Trigger: CTCCTGCTCTGTCGGCATGCAGACAAGAAAAGTCAT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCATAGAGGGGATCTGTaGAGTCTCGGCCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNHRGDL*SLGPRW
Trigger: CCAACGGGGGCCGAGACTGCACAGATCCCCTCTATG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGGACTAATTGGCATCTaGGCCATTTGTGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCGLIGI*AICESS
Trigger: GGAAGACTCACAAATGGCGCAGATGCCAATTAGTCC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCCCACAGCCTTCCTGTaGTCCAGGGCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQPTAFL*SRAVLL
Trigger: CAACAAGACAGCCCTGGAGCACAGGAAGGCTGTGGG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCCATCTGCTGTATTCTaGATGCATCTCACTTTTCGG +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEPSAVF*MHLTFR
Trigger: CCGAAAAGTGAGATGCATGCAGAATACAGCAGATGG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCCATTTCCACAAACTaGCTTCTCACTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESISTN*LLTQLT
Trigger: TGTCAGCTGAGTGAGAAGGCAGTTTGTGGAAATGGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTGGGCAAGGCTGGCTaGAGGATTCCTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLGKAG*RIPPEP
Trigger: TGGTTCTGGAGGAATCCTGCAGCCAGCCTTGCCCAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACCTGAAATCCTGTCCTaGAGCCAGGGCCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIPEILS*SQGHLR
Trigger: CCTCAGGTGGCCCTGGCTGCAGGACAGGATTTCAGG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACCTTCCCCGTCCTGCTaGGTTACTGGAGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIPSPSC*VTGGLG
Trigger: ACCCAACCCTCCAGTAACCCAGCAGGACGGGGAAGG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAATTCTGCTGGTTATTaGGTCTCTCGGCCTGCTTAC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCNSAGY*VSRPAY
Trigger: GTAAGCAGGCCGAGAGACCCAATAACCAGCAGAATT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCTGGATTGGCACACCTaGAACTCCGTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPLDWHT*NSVRFG
Trigger: TCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCGGCCTCGCATGGACTaGATTGGCACACCTGGAACT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQRPRMD*IGTPGT
Trigger: AGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCTCGGCCTCGCATaGACTGGATTGGCACACCTG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFILLGLA*TGLAHL
Trigger: CAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAGAGGAGGTTTTCGTTaGCCTGCACGCAGTACACCT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPRGGFR*PARSTP
Trigger: AGGTGTACTGCGTGCAGGCCAACGAAAACCTCCTCT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCAAGGCAAAACACATTaGGTCCATGGACCCCATTCA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCQGKTH*VHGPHS
Trigger: TGAATGGGGTCCATGGACCCAATGTGTTTTGCCTTG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGGGCAGGGTTTGGACTaGTCCATCAGGGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQGQGLD*SIREGH
Trigger: ATGCCCTTCCCTGATGGACCAGTCCAAACCCTGCCC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATGGGCCTCCTGCACTTaGCATGGAGACCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIWASCT*HGDHWP
Trigger: TGGCCAGTGGTCTCCATGCCAAGTGCAGGAGGCCCA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCTGAGGGCAGGACCTaGGGAGACCCTTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPEGRT*GDPYSQ
Trigger: CTGGGAATAAGGGTCTCCCCAGGTCCTGCCCTCAGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CAA 72 bp CCCAGATCATTTGGGAATTGTGCTTCTCATGTACTATaGAGACCCACGTCAGCTTTAGAACAGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PRSFGNCASHVL*RPTSALEQALP
Trigger: AGGGAGAGCCTGTTCTAAAGCTGACGTGGGTCTCAATAGTACATGAGAAGCACAATTCCCAAATGATCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTATAACCTCTCTGGTCTaGTATCCAATCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCITSLV*YPIWMS
Trigger: GGACATCCAGATTGGATATCAGACCAGAGAGGTTAT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTCTTGTCCTGCTGACTaGGCAAAGGGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSCPAD*AKGPHG
Trigger: GCCGTGTGGACCCTTTGCTCAGTCAGCAGGACAAGA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGACCAGCTGGTCAATTaGCAGTCATCCTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNDQLVN*QSSWQG
Trigger: CCCCTGCCAGGATGACTGTCAATTGACCAGCTGGTC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTACAGTCTCCATTGCATaGAGAAAACTTGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCTVSIA*RKLGPA
Trigger: AGCTGGTCCAAGTTTTCTTCATGCAATGGAGACTGT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAAGTTGGACCACTCACTaGGCTTGCAGTCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFISWTTH*ACSLRG
Trigger: GCCCCTCAGACTGCAAGCTCAGTGAGTGGTCCAACT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTGCCGGAAACTGCTTTaGTTGCAAGGCAAAACACAT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCCRKLL*LQGKTH
Trigger: ATGTGTTTTGCCTTGCAATCAAAGCAGTTTCCGGCA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCATTTTGGGGACAATaGCATCCTAACCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESFWGQ*HPNLMS
Trigger: AGACATCAGGTTAGGATGTCATTGTCCCCAAAATGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAACACCTGAAACTGGTTaGCATGGTCCAGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKTPETG*HGPVWG
Trigger: GCCCCAAACTGGACCATGTCAACCAGTTTCAGGTGT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCTTCTTGCAAAGCACTaGTATTTGGACAGCGAATTC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELLAKH*YLDSEF
Trigger: GAATTCGCTGTCCAAATAGCAGTGCTTTGCAAGAAG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCATAGAGGGGATCTGTaGAGTCTCGGCCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNHRGDL*SLGPRW
Trigger: CCAACGGGGGCCGAGACTGCACAGATCCCCTCTATG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACCCACAGCCTTCCTGTaGTCCAGGGCTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIPTAFL*SRAVLL
Trigger: CAACAAGACAGCCCTGGAGCACAGGAAGGCTGTGGG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGTTCCCCACAGGTTGTaGATTATATTTGTCACAAGG +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEVPHRL*IIFVTR
Trigger: CCTTGTGACAAATATAATGCACAACCTGTGGGGAAC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCCCACAGGACTTGCTaGAGCGCGACCAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSHRTC*SATSWT
Trigger: GGTCCAACTGGTCGCGCTGCAGCAAGTCCTGTGGGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCACTCCCACAGGACTTaGTGCAGCGCGACCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNHSHRT*CSATSW
Trigger: CCAACTGGTCGCGCTGCAGCAAGTCCTGTGGGAGTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACCCATAGGTACTGGTTaGAGTCACTGTGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKPIGTG*SHCGMG
Trigger: TCCCATGCCACAGTGACTGCAACCAGTACCTATGGG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTCCATTTCCACAAACTaGCTTCTCACTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCSISTN*LLTQLT
Trigger: TGTCAGCTGAGTGAGAAGGCAGTTTGTGGAAATGGA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCAGGGCATTCCACCATaGAGGACGTGTTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQQGIPP*RTCSSA
Trigger: GGCAGATGAACACGTCCTGCATGGTGGAATGCCCTG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGAGCTACAATGACCACTaGCACCTACCTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQSYNDH*HLPEGG
Trigger: CCCACCCTCAGGTAGGTGGCAGTGGTCATTGTAGCT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGGGTTACTGGAGGGTTaGGTTGGATGTACAGCCCGA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQGLLEG*VGCTAR
Trigger: TCGGGCTGTACATCCAACCCAACCCTCCAGTAACCC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACGGCCTCGCATGGACTaGATTGGCACACCTGGAACT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIRPRMD*IGTPGT
Trigger: AGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGGAAGCTTCTCTTGCTaGCAAAAGCTTAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEGSFSC*QKLKSA
Trigger: TGCTGATTTAAGCTTTTGCCAGCAAGAGAAGCTTCC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATTCTCCAGCCATACGTaGCACAGGGGACAACTCCAT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKFSSHT*HRGQLH
Trigger: ATGGAGTTGTCCCCTGTGCCACGTATGGCTGGAGAA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGTTGGACAAGGAATGTaGCACAGCTGTGTAGTATTA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEVGQGM*HSCVVL
Trigger: TAATACTACACAGCTGTGCCACATTCCTTGTCCAAC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCTCCTTTCCGTTATCTaGCTCGCAGTTTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPLLSVI*LAVSQS
Trigger: AGACTGGGAAACTGCGAGCCAGATAACGGAAAGGAG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTTGAACTTGCGTGCCTaGACCACACTCCTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPLNLRA*TTLLSV
Trigger: AACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGGACCAGTTTGCCAGTaGTACACTGTGCAAGGATGC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKGPVCQ*YTVQGC
Trigger: GCATCCTTGCACAGTGTACCACTGGCAAACTGGTCC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTACTGTAGGCACTCATaGATTCCAGCCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPYCRHS*IPACPP
Trigger: TGGAGGACAGGCTGGAATCCATGAGTGCCTACAGTA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTCACTGGGCAGGGTTTaGACTGGTCCATCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQSLGRV*TGPSGK
Trigger: CTTCCCTGATGGACCAGTCCAAACCCTGCCCAGTGA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCATAACAAGGCTTCACTaGGCAGGGTTTGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPITRLH*AGFGLV
Trigger: GACCAGTCCAAACCCTGCCCAGTGAAGCCTTGTTAT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCACTGTCTTGTGGTGTaGAATGTGAACAAAGACTCG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCHCLVV*NVNKDS
Trigger: CGAGTCTTTGTTCACATTCCACACCACAAGACAGTG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCGACCACCAAGATGCTaGATTTATTCAGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLERPPRC*IYSVDF
Trigger: AAAATCCACTGAATAAATTCAGCATCTTGGTGGTCG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCTGGCACTCTTTGGTaGTCACACAGGACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPGTLW*SHRTGR
Trigger: CCTTCCAGTCCTGTGTGATCACCAAAGAGTGCCAGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGATGGCTTCCAGTAAGTaGGGGCAGTTTCCGGTTACC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQMASSK*GQFPVT
Trigger: GGTAACCGGAAACTGCCCTCACTTACTGGAAGCCAT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAGTTGGACCACTCACTaGGCTTGCAGTCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSWTTH*ACSLRG
Trigger: GCCCCTCAGACTGCAAGCTCAGTGAGTGGTCCAACT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGGTCTTCCATCACCTTaGAAGGGCTGGGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQGLPSP*KGWVTV
Trigger: AACAGTGACCCAGCCCTTTCAAGGTGATGGAAGACC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTACATTTATACCATCTaGCCTTTGACACCACACTGT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEYIYTI*PLTPHC
Trigger: ACAGTGTGGTGTCAAAGGTCAGATGGTATAAATGTA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCCTTCTGTATGGTACTaGAAAGTACAGTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPPSVWY*KVQSSL
Trigger: GAGGGAGGACTGTACTTTTCAGTACCATACAGAAGG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCACAAATGCCCCAGCTaGTACACCGTAAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQHKCPS*YTVNPG
Trigger: ACCTGGGTTTACGGTGTAGCAGCTGGGGCATTTGTG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGAAGCGCCTATCGTGCTaGACTAATATAGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEKRLSC*TNIVQK
Trigger: TTTTTGCACTATATTAGTGCAGCACGATAGGCGCTT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCAGGATACAAGAACTTaGAAATGTCTTCATGCCACT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEQDTRT*KCLHAT
Trigger: AGTGGCATGAAGACATTTGCAAGTTCTTGTATCCTG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACTGCCAATGGGAAACTaGCTGATGGTTCGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKLPMGN*LMVRVL
Trigger: AAGGACACGAACCATCAGGCAGTTTCCCATTGGCAG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTTTTCTTGTCTGCATaGCGACAGAGCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLFLSA*RQSRRP
Trigger: AGGCCTCCTGCTCTGTCGGCATGCAGACAAGAAAAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCCAGGGCTGTCTTGTTaGACGCTCCAAGGGACTAAT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQPGLSC*TLQGTN
Trigger: ATTAGTCCCTTGGAGCGTGCAACAAGACAGCCCTGG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATACAAGTAATGGCTCTTaGCTGTCGCCCAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNTSNGS*LSPRPT
Trigger: TGTGGGCCTGGGCGACAGGCAAGAGCCATTACTTGT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCTTTCTGGTCCTAACTaGACCACAGTCTCCATTGCA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPLSGPN*TTVSIA
Trigger: TGCAATGGAGACTGTGGTGCAGTTAGGACCAGAAAG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTATCGTAGCATGCCATTaGTTGGTAACGATATCCTTG +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCIVACH*LVTISL
Trigger: CAAGGATATCGTTACCAAGCAATGGCATGCTACGAT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTCACTTTTCGGGTTTaGACGCCCTCTCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLTFRV*TPSPQF
Trigger: GAACTGTGGAGAGGGCGTGCAAACCCGAAAAGTGAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAACTGGAGGGTTGGGTTaGATGTACAGCCCGACTGGT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFITGGLG*MYSPTG
Trigger: ACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATACTGGAGGGTTGGGTTaGATGTACAGCCCGACTGGT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNTGGLG*MYSPTG
Trigger: ACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGTCCTGCTGGGTTACTaGAGGGTTGGGTTGGATGTA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQVLLGY*RVGLDV
Trigger: TACATCCAACCCAACCCTCCAGTAACCCAGCAGGAC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCACACAGCCCTCGTTTaGATGCCTCCGGGACCACAT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNHTALV*MPPGPH
Trigger: ATGTGGTCCCGGAGGCATCCAAACGAGGGCTGTGTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAACGATGCAATCTTGCTaGCAAGGAATGAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKTMQSC*QGMRQA
Trigger: GGCTTGCCTCATTCCTTGCCAGCAAGATTGCATCGT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGAACTCCGTCAGGTTTaGACAGCCAGAGCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIELRQV*TARASE
Trigger: TTCGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATGGTTGCAGTCACTGTaGCATGGGACAACCTCATAC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKWLQSL*HGTTSY
Trigger: GTATGAGGTTGTCCCATGCCACAGTGACTGCAACCA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCAGGGGCATCTCTTCTaGGTCACAGAGGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQQGHLF*VTEVIL
Trigger: GAGGATTACCTCTGTGACCCAGAAGAGATGCCCCTG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAGCCCTTCCAAGCACTaGCCATCCATTTATATTCAT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCSPSKH*PSIYIH
Trigger: ATGAATATAAATGGATGGCCAGTGCTTGGAAGGGCT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCAGGAGGATATGGGATaGTCTAAAGCAAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPQEDMG*SKASVG
Trigger: GCCTACACTTGCTTTAGACCATCCCATATCCTCCTG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACAGTACGAGTGGGGTTaGCTACACGGTGGGTTACAA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIQYEWG*LHGGLQ
Trigger: TTGTAACCCACCGTGTAGTCAACCCCACTCGTACTG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGCCAATCGCAAACTTTaGAACAATTCTGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCANRKL*NNSAGY
Trigger: ATAACCAGCAGAATTGTTTCAAAGTTTGCGATTGGC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAATGCACACAACCTCTTaGACTTGCGTGCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIMHTTS*TCVPGP
Trigger: TGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCAT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTCTGATGGGATCAGCTaGCCTTTGCCGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSDGIS*PLPETA
Trigger: AGCAGTTTCCGGCAAAGGTCAGCTGATCCCATCAGA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGCCTTCTCACTCAGCTaGCATGTACTCCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQAFSLS*HVLQSV
Trigger: AACAGACTGGAGTACATGTCAGCTGAGTGAGAAGGC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATCACCGGTCTGGATCTaGCCTGTATTCCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFISPVWI*PVFHQS
Trigger: GCTTTGGTGGAATACAGGTCAGATCCAGACCGGTGA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTACATTTATACCATCTaGCCTTTGACACCACACTGT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCYIYTI*PLTPHC
Trigger: ACAGTGTGGTGTCAAAGGTCAGATGGTATAAATGTA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTTGTGGTGTGGAATGTaGACAAAGACTCGAGATGGA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPLWCGM*TKTRDG
Trigger: TCCATCTCGAGTCTTTGTTCACATTCCACACCACAA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGAGATTTTTGATCACTaGAAACATGACTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEEIFDH*KHDSHK
Trigger: TTTGTGGGAGTCATGTTTTCAGTGATCAAAAATCTC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGCCGAAACTGGTTGTTaGCAGGAAAAGTTATATGTT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCAETGC*QEKLYV
Trigger: AACATATAACTTTTCCTGGCAACAACCAGTTTCGGC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCGTACAACTCTTTGTaGCAATCGCAAACTTTGAAA +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESYNSL*QSQTLK
Trigger: TTTCAAAGTTTGCGATTGGCACAAAGAGTTGTACGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACTTTGTCTTTCTGGATaGACGCTATCTCCCTCACCT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKLCLSG*TLSPSP
Trigger: AGGTGAGGGAGATAGCGTGCATCCAGAAAGACAAAG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAAAATTCAGACACGATaGAATCTTGCTGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCKIQTR*NLAGKE
Trigger: TTCCTTGCCAGCAAGATTGCATCGTGTCTGAATTTT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCTTCCCGCGTCTCCTTaGTTGTCTTACTTGTCGGGA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNLPASP*LSYLSG
Trigger: TCCCGACAAGTAAGACAAGCAAGGAGACGCGGGAAG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGTGTCCTTACACGAGTaGCTGCAGGGGACACCATGT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNVSLHE*LQGTPC
Trigger: ACATGGTGTCCCCTGCAGGCACTCGTGTAAGGACAC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTGCCAATGGGAAACTaGCTGATGGTTCGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLPMGN*LMVRVL
Trigger: AAGGACACGAACCATCAGGCAGTTTCCCATTGGCAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAGGTTTTCGTTGGCCTaGACGCAGTACACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNRFSLA*TQYTSR
Trigger: CCGAGAGGTGTACTGCGTGCAGGCCAACGAAAACCT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCTCTTGAACTTGCGTaGCTGGACCACACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPLELA*LDHTPF
Trigger: GAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGGAAGATGGCATCTCTaGACAGCTGTCTGTCAACTT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKGRWHL*TAVCQL
Trigger: AAGTTGACAGACAGCTGTGCAGAGATGCCATCTTCC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCAGGGCTGTCTTGTTaGACGCTCCAAGGGACTAAT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPGLSC*TLQGTN
Trigger: ATTAGTCCCTTGGAGCGTGCAACAAGACAGCCCTGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCCATAGGTACTGGTTaGAGTCACTGTGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPIGTG*SHCGMG
Trigger: TCCCATGCCACAGTGACTGCAACCAGTACCTATGGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCAGGACGTGTTCATCTaGCAGTTCTTCTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQQDVFI*QFFSKP
Trigger: TGGCTTGGAGAAGAACTGGCAGATGAACACGTCCTG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGTCAACATGTTTCAGTaGTATCTTCACTCATTAAGC +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEVNMFQ*YLHSLS
Trigger: GCTTAATGAGTGAAGATAGCACTGAAACATGTTGAC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGATTCCTCACAGATTTaGTCAAGGACTACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEDSSQI*SRTTVF
Trigger: AAAAACAGTAGTCCTTGAGCAAATCTGTGAGGAATC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTATTTGTTGTGGCCTCTaGACATCTATGAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCICCGL*TSMKSE
Trigger: TTCTGACTTCATAGATGTCCAGAGGCCACAACAAAT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCATACATCGGCCCCATaGACCAGTCTTCCACAGATA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQHTSAP*TSLPQI
Trigger: TATCTGTGGAAGACTGGTCCATGGGGCCGATGTATG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGCTCCAGGAGAGGCTTaGGCTCAAAGTACTCACAGA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIAPGEA*AQSTHR
Trigger: TCTGTGAGTACTTTGAGCCCAAGCCTCTCCTGGAGC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGGACTGGAAGGTCATTaGAAGCTTCTCTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQGLEGH*KLLLLA
Trigger: TGCCAGCAAGAGAAGCTTCCAATGACCTTCCAGTCC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGACCACTCGGAAACCTaGCACTCTTTGGTGATCACA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQDHSET*HSLVIT
Trigger: TGTGATCACCAAAGAGTGCCAGGTTTCCGAGTGGTC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGCTCTTCACAGGGAATaGCTTCCAGTAAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIALHRE*LPVSEG
Trigger: GCCCTCACTTACTGGAAGCCATTCCCTGTGAAGAGC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGCTCTTCACAGGGAATaGCTTCCAGTAAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNALHRE*LPVSEG
Trigger: GCCCTCACTTACTGGAAGCCATTCCCTGTGAAGAGC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTTGAACTTGCGTGCCTaGACCACACTCCTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLNLRA*TTLLSV
Trigger: AACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCAGGGATGGGGAAGATaGCATCTCTGCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNQGWGR*HLCTAV
Trigger: GACAGCTGTGCAGAGATGCCATCTTCCCCATCCCTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTTTTTGGGTCCCACTTaGCCCACATTGACTCGCACA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQFLGPT*PTLTRT
Trigger: TGTGCGAGTCAATGTGGGCCAAGTGGGACCCAAAAA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCCTTCCTCCATTATATaGTTTTTCACGCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCPSSII*FFTQPF
Trigger: AAATGGCTGCGTGAAAAACCATATAATGGAGGAAGG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGCAGTCACTGTGGCATaGGACAACCTCATACACCTG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNAVTVA*DNLIHL
Trigger: CAGGTGTATGAGGTTGTCCCATGCCACAGTGACTGC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGTGACCCATAGGTACTaGTTGCAGTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQVTHRY*LQSLWH
Trigger: ATGCCACAGTGACTGCAACCAGTACCTATGGGTCAC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATCTTCCTTCATCAGCTaGTTGTCTGATGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKSSFIS*LSDGIS
Trigger: GCTGATCCCATCAGACAACCAGCTGATGAAGGAAGA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCACTGGGCAGGGTTTaGACTGGTCCATCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSLGRV*TGPSGK
Trigger: CTTCCCTGATGGACCAGTCCAAACCCTGCCCAGTGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCTCCTGCACTTGGCATaGAGACCACTGGCCATATTG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNLLHLA*RPLAIL
Trigger: CAATATGGCCAGTGGTCTCCATGCCAAGTGCAGGAG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACAAATAACAGTCACCTaGGCAAGGCTGGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIQITVT*ARLAAG
Trigger: TCCTGCAGCCAGCCTTGCCCAGGTGACTGTTATTTG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAAACAAAGACTCGAGATaGAGGCAGGAGGATATGGGA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKNKDSR*RQEDMG
Trigger: TCCCATATCCTCCTGCCTCCATCTCGAGTCTTTGTT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAGATCCCAGATCATTTaGGAATTGTGCTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCRSQII*ELCFSC
Trigger: ACATGAGAAGCACAATTCCCAAATGATCTGGGATCT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CAA 72 bp AGTGTGTGTACAGCAGGTGTAATAGCTGATTTCATCTaGCTGCCATCCAAACTGAACTTTACTCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVCTAGVIADFI*LPSKLNFTLFR
Trigger: CCTGAAGAGAGTAAAGTTCAGTTTGGATGGCAGCAAGATGAAATCAGCTATTACACCTGCTGTACACACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACATTGTTCGCTTCAGATaGGAAGGAGGGAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNIVRFR*EGGRAR
Trigger: ACGCGCTCTCCCTCCTTCTCATCTGAAGCGAACAAT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAATAACCTCTCTGGTCTaGTATCCAATCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKITSLV*YPIWMS
Trigger: GGACATCCAGATTGGATATCAGACCAGAGAGGTTAT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCAATGGGAAACTGCCTaGTGGTTCGTGTCCTTACAC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNQWETA*WFVSLH
Trigger: GTGTAAGGACACGAACCATCAGGCAGTTTCCCATTG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCACAACTCCATCTCCTTaGGACAAACAGGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPTTPSP*DKQGSF
Trigger: AAAAGAACCCTGTTTGTCTCAAGGAGATGGAGTTGT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATACACGAAGAGGGGCATaGTGTCCAGTCACTATATGG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNTRRGA*CPVTIW
Trigger: CCATATAGTGACTGGACATCATGCCCCTCTTCGTGT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACTTGTCCGCATTCCTTaGTGTCTCCTTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKLVRIP*CLLVLS
Trigger: TGAAAGTACAAGGAGACATCAAGGAATGCGGACAAG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGACCAATCAGAAAGCTaGCAGTTCACAGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNDQSES*QFTGHS
Trigger: GGAATGCCCTGTGAACTGTCAGCTTTCTGATTGGTC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCACCGGTCTGGATCTaGCCTGTATTCCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSPVWI*PVFHQS
Trigger: GCTTTGGTGGAATACAGGTCAGATCCAGACCGGTGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGATACCATCTGACCTTTaGCACCACACTGTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQIPSDL*HHTVRE
Trigger: TTCCCGAACAGTGTGGTGTCAAAGGTCAGATGGTAT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAACTTAACAGGGGTCTaGTTAAGCTACAATGACCAC +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPNLTGV*LSYNDH
Trigger: GTGGTCATTGTAGCTTAATCAGACCCCTGTTAAGTT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGTGAGAAGGAAGACGTaGATTTACCTTGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKVRRKT*IYLEMP
Trigger: GGGCATTTCAAGGTAAATTCACGTCTTCCTTCTCAC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATTGTGGTGTGGAATGTaGACAAAGACTCGAGATGGA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKLWCGM*TKTRDG
Trigger: TCCATCTCGAGTCTTTGTTCACATTCCACACCACAA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACCAGTTTCTGATACCTaGAATCCTGTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIPVSDT*NPVLQP
Trigger: TGGCTGCAGGACAGGATTTCAGGTATCAGAAACTGG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATCACACACCAGTTTCTaGTACCTGAAATCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKSHTSF*YLKSCP
Trigger: AGGACAGGATTTCAGGTATCAGAAACTGGTGTGTGA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGACAACCTCATACACCTaGAACTGGTTGACATGGTCC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQTTSYT*NWLTWS
Trigger: GGACCATGTCAACCAGTTTCAGGTGTATGAGGTTGT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCACAAATGCCCCAGCTaGTACACCGTAAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNHKCPS*YTVNPG
Trigger: ACCTGGGTTTACGGTGTAGCAGCTGGGGCATTTGTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCAATTTCACAATGGCTaGAGTGATGAGGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPQFHNG*SDEEVC
Trigger: ACACACTTCCTCATCACTGCAGCCATTGTGAAATTG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAGCAAAGCTCTTTCCTaGTATTGTTCGCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPSKALS*YCSLQM
Trigger: CATCTGAAGCGAACAATAGCAGGAAAGAGCTTTGCT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGATCCTTTACTCCTTTaGTGCGGTCCTTTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQDPLLL*CGPFPV
Trigger: AACGGGAAAAGGACCGCAGCAAAGGAGTAAAGGATC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGTTTCCCAGTCTCACTaGTTTCCAGTCATAACAGGC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQVSQSH*FPVITG
Trigger: GCCTGTTATGACTGGAAAGCAGTGAGACTGGGAAAC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGCCAGTGGTACACTGTaGAAGGATGCTCATTACAGC +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIASGTL*KDAHYS
Trigger: GCTGTAATGAGCATCCTTGCACAGTGTACCACTGGC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGCCAGTGGTACACTGTaGAAGGATGCTCATTACAGC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNASGTL*KDAHYS
Trigger: GCTGTAATGAGCATCCTTGCACAGTGTACCACTGGC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTTTCTGGTCCTAACTaGACCACAGTCTCCATTGCA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLSGPN*TTVSIA
Trigger: TGCAATGGAGACTGTGGTGCAGTTAGGACCAGAAAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCAGGACGTGTTCATCTaGCAGTTCTTCTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNQDVFI*QFFSKP
Trigger: TGGCTTGGAGAAGAACTGGCAGATGAACACGTCCTG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGTCAACATGTTTCAGTaGTATCTTCACTCATTAAGC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCVNMFQ*YLHSLS
Trigger: GCTTAATGAGTGAAGATAGCACTGAAACATGTTGAC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCTTTTGTCCTCCATaGTGGGTAATACCACCACGG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFILFCPP*WVIPPR
Trigger: CCGTGGTGGTATTACCCACCATGGAGGACAAAAGAG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGTCCTGCTGGGTTACTaGAGGGTTGGGTTGGATGTA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNVLLGY*RVGLDV
Trigger: TACATCCAACCCAACCCTCCAGTAACCCAGCAGGAC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTTAATCCACACAGTTTaGATACATTTGTTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCLIHTV*IHLLWP
Trigger: AGGCCACAACAAATGTATCCAAACTGTGTGGATTAA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGCTCCAGGAGAGGCTTaGGCTCAAAGTACTCACAGA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNAPGEA*AQSTHR
Trigger: TCTGTGAGTACTTTGAGCCCAAGCCTCTCCTGGAGC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCTGGATTGGCACACCTaGAACTCCGTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNLDWHT*NSVRFG
Trigger: TCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAAAGCTCGCGGGCTTCTaGATCCTTTACTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIKLAGF*ILYSFA
Trigger: AGCAAAGGAGTAAAGGATCCAGAAGCCCGCGAGCTT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGGACTGGAAGGTCATTaGAAGCTTCTCTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNGLEGH*KLLLLA
Trigger: TGCCAGCAAGAGAAGCTTCCAATGACCTTCCAGTCC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGTGATCACACAGGACTaGAAGGTCATTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQVITQD*KVIGSF
Trigger: GAAGCTTCCAATGACCTTCCAGTCCTGTGTGATCAC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACCGCATAGGCCAGAATaGATCGTGCTCGTATCTGTT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIPHRPE*IVLVSV
Trigger: AACAGATACGAGCACGATCCATTCTGGCCTATGCGG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCGCATAGGCCAGAATaGATCGTGCTCGTATCTGTT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPHRPE*IVLVSV
Trigger: AACAGATACGAGCACGATCCATTCTGGCCTATGCGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACAAAGCACTGCTATTTaGACAGCGAATTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKQSTAI*TANSTF
Trigger: GAAGGTGGAATTCGCTGTCCAAATAGCAGTGCTTTG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGGACCAGTTTGCCAGTaGTACACTGTGCAAGGATGC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNGPVCQ*YTVQGC
Trigger: GCATCCTTGCACAGTGTACCACTGGCAAACTGGTCC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATTTTTGGGTCCCACTTaGCCCACATTGACTCGCACA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIFLGPT*PTLTRT
Trigger: TGTGCGAGTCAATGTGGGCCAAGTGGGACCCAAAAA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGCAGTCACTGTGGCATaGGACAACCTCATACACCTG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNAVTVA*DNLIHL
Trigger: CAGGTGTATGAGGTTGTCCCATGCCACAGTGACTGC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGTGACCCATAGGTACTaGTTGCAGTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIVTHRY*LQSLWH
Trigger: ATGCCACAGTGACTGCAACCAGTACCTATGGGTCAC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGGAGGCAGGAGGATATaGGATGGTCTAAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNGGRRI*DGLKQV
Trigger: CACTTGCTTTAGACCATCCCATATCCTCCTGCCTCC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTGCTGCCATCCAAACTaGACTTTACTCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQCCHPN*TLLSSG
Trigger: TCCTGAAGAGAGTAAAGTTCAGTTTGGATGGCAGCA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGAGCAGGTGTAATAGCTaGTTTCATCTTGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQSRCNS*FHLAAI
Trigger: GATGGCAGCAAGATGAAATCAGCTATTACACCTGCT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGTTGAAGGACGATACTaGGGTGTCCTCAATGCACTG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNVEGRY*GVLNAL
Trigger: CAGTGCATTGAGGACACCTCAGTATCGTCCTTCAAC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACACACGAAGAGGGGCATaGTGTCCAGTCACTATATGG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNTRRGA*CPVTIW
Trigger: CCATATAGTGACTGGACATCATGCCCCTCTTCGTGT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGACAGTCTCCATTGCATaGAGAAAACTTGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQTVSIA*RKLGPA
Trigger: AGCTGGTCCAAGTTTTCTTCATGCAATGGAGACTGT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTCACAAGGACAATACTaGGTCTCAATCAGGGGATAC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQSQGQY*VSIRGY
Trigger: GTATCCCCTGATTGAGACTCAGTATTGTCCTTGTGA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATGTTTGAGAACATTCTaGCCAAGGAGACCAATCAGA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKCLRTF*PRRPIR
Trigger: TCTGATTGGTCTCCTTGGTCAGAATGTTCTCAAACA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGTGAGGCCACATGTTTaGGAACATTCTGACCAAGGA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNVRPHV*EHSDQG
Trigger: TCCTTGGTCAGAATGTTCTCAAACATGTGGCCTCAC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGCTGAAATCATCAGCTaGCCCATCACTTACTACACA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQAEIIS*PITYYT
Trigger: TGTGTAGTAAGTGATGGGTCAGCTGATGATTTCAGC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGACGTGAATTTACCTTaGAATGCCCAGGAACTTAAC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKDVNLP*NAQELN
Trigger: GTTAAGTTCCTGGGCATTTCAAGGTAAATTCACGTC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACACACTCTGAGTGAGTaGCACTTTGATTCTAATAGG +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKHTLSE*HFDSNR
Trigger: CCTATTAGAATCAAAGTGTCACTCACTCAGAGTGTG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCTTCTGTATGGTACTaGAAAGTACAGTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPSVWY*KVQSSL
Trigger: GAGGGAGGACTGTACTTTTCAGTACCATACAGAAGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGGAAAGATCACATTCTaGCAAGATTCCTCACAGATT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPGKITF*QDSSQI
Trigger: AATCTGTGAGGAATCTTGTCAGAATGTGATCTTTCC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAAGCGCCTATCGTGCTaGACTAATATAGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPKRLSC*TNIVQK
Trigger: TTTTTGCACTATATTAGTGCAGCACGATAGGCGCTT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCTTTGTCTTTCTGGATaGACGCTATCTCCCTCACCT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNLCLSG*TLSPSP
Trigger: AGGTGAGGGAGATAGCGTGCATCCAGAAAGACAAAG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGACACGATGCAATCTTaGTGGCAAGGAATGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNDTMQS*WQGMRQ
Trigger: TTGCCTCATTCCTTGCCAGCAAGATTGCATCGTGTC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGATCCTTTACTCCTTTaGTGCGGTCCTTTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIDPLLL*CGPFPV
Trigger: AACGGGAAAAGGACCGCAGCAAAGGAGTAAAGGATC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACAGCTTCGTACTTCTTaGAAAGCACTGCTATTTGGA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKQLRTS*KALLFG
Trigger: TCCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAATGACTTTTCTTGTCTaGATGCCGACAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIMTFLV*MPTEQE
Trigger: CTCCTGCTCTGTCGGCATGCAGACAAGAAAAGTCAT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGGACTAATTGGCATCTaGGCCATTTGTGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNGLIGI*AICESS
Trigger: GGAAGACTCACAAATGGCGCAGATGCCAATTAGTCC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGCCTGTCCTCCATCTTaGTTGCGACAAGTAATGGCT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNACPPS*LRQVMA
Trigger: AGCCATTACTTGTCGCAAGCAAGATGGAGGACAGGC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAATGTTTCCACAAGCCTaGCATTTTGATCGTAGCATG +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKMFPQA*HFDRSM
Trigger: CATGCTACGATCAAAATGGCAGGCTTGTGGAAACAT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACTGCTGTATTCTGCATaGATCTCACTTTTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKLLYSA*ISLFGF
Trigger: AAACCCGAAAAGTGAGATGCATGCAGAATACAGCAG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCCATCTGCTGTATTCTaGATGCATCTCACTTTTCGG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQPSAVF*MHLTFR
Trigger: CCGAAAAGTGAGATGCATGCAGAATACAGCAGATGG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTTCAGAAGGGCCATCTaGTGTATTCTGCATGCATCT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQFRRAI*CILHAS
Trigger: AGATGCATGCAGAATACAGCAGATGGCCCTTCTGAA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAAGCTCTTCATATACTaGCCATTTTTAAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCKLFIY*PFLRSD
Trigger: GTCAGATCTTAAAAATGGGCAGTATATGAAGAGCTT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTGGATACATTTGTTGTaGCCTCTGGACATCTATGAA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPWIHLL*PLDIYE
Trigger: TTCATAGATGTCCAGAGGCCACAACAAATGTATCCA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATAATTCTGCTGGTTATTaGGTCTCTCGGCCTGCTTAC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNNSAGY*VSRPAY
Trigger: GTAAGCAGGCCGAGAGACCCAATAACCAGCAGAATT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACACGATGCAATCTTGCTaGCAAGGAATGAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNTMQSC*QGMRQA
Trigger: GGCTTGCCTCATTCCTTGCCAGCAAGATTGCATCGT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGGAAGCTTCTCTTGCTaGCAAAAGCTTAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKGSFSC*QKLKSA
Trigger: TGCTGATTTAAGCTTTTGCCAGCAAGAGAAGCTTCC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGTTGGACAAGGAATGTaGCACAGCTGTGTAGTATTA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKVGQGM*HSCVVL
Trigger: TAATACTACACAGCTGTGCCACATTCCTTGTCCAAC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCTCCTTTCCGTTATCTaGCTCGCAGTTTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNLLSVI*LAVSQS
Trigger: AGACTGGGAAACTGCGAGCCAGATAACGGAAAGGAG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAAAAACTTGGACCAGCTaGTCAATTGACAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKKTWTS*SIDSHP
Trigger: AGGATGACTGTCAATTGACCAGCTGGTCCAAGTTTT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCCTTCCTCCATTATATaGTTTTTCACGCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPPSSII*FFTQPF
Trigger: AAATGGCTGCGTGAAAAACCATATAATGGAGGAAGG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTGGTTGCAGTCACTGTaGCATGGGACAACCTCATAC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNWLQSL*HGTTSY
Trigger: GTATGAGGTTGTCCCATGCCACAGTGACTGCAACCA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCAAGGCAAAACACATTaGGTCCATGGACCCCATTCA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNQGKTH*VHGPHS
Trigger: TGAATGGGGTCCATGGACCCAATGTGTTTTGCCTTG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTCTTCCTTCATCAGCTaGTTGTCTGATGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSSFIS*LSDGIS
Trigger: GCTGATCCCATCAGACAACCAGCTGATGAAGGAAGA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCATCAGGGAAGGGCATaGTCTTCCATCACCTTGAAA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNHQGRA*SSITLK
Trigger: TTTCAAGGTGATGGAAGACCATGCCCTTCCCTGATG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGCCTCTGGACATCTATaGAGTCAGAAAGCCGAAACT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNASGHL*SQKAET
Trigger: AGTTTCGGCTTTCTGACTTCATAGATGTCCAGAGGC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATAGCAGGTGTAATAGCTaGTTTCATCTTGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSRCNS*FHLAAI
Trigger: GATGGCAGCAAGATGAAATCAGCTATTACACCTGCT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGCCAATCGCAAACTTTaGAACAATTCTGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKANRKL*NNSAGY
Trigger: ATAACCAGCAGAATTGTTTCAAAGTTTGCGATTGGC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCAAAGTACTCACAGATaGTATCCTCCGCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNQSTHR*YPPQEC
Trigger: ACATTCCTGCGGAGGATATCATCTGTGAGTACTTTG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGCTGAAATCATCAGCTaGCCCATCACTTACTACACA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIAEIIS*PITYYT
Trigger: TGTGTAGTAAGTGATGGGTCAGCTGATGATTTCAGC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCATCCACCACTTTGCTaGAATCATCAGCTGACCCAT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNHPPLC*NHQLTH
Trigger: ATGGGTCAGCTGATGATTTCAGCAAAGTGGTGGATG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACATACCATCTGACCTTTaGCACCACACTGTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNIPSDL*HHTVRE
Trigger: TTCCCGAACAGTGTGGTGTCAAAGGTCAGATGGTAT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCATAAGAGGGTTAGCTaGATTTTTCAAGTAACCACA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPHKRVS*IFQVTT
Trigger: TGTGGTTACTTGAAAAATTCAGCTAACCCTCTTATG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTCACACACCAGTTTCTaGTACCTGAAATCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSHTSF*YLKSCP
Trigger: AGGACAGGATTTCAGGTATCAGAAACTGGTGTGTGA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCCCATTTTTAAGATCTaGCTTGGTAGAAACACAGAA +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPPIFKI*LGRNTE
Trigger: TTCTGTGTTTCTACCAAGTCAGATCTTAAAAATGGG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGGGATAAGTGTGCATTaGTCAAGGGTGCTGTTAGAA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIGISVH*SRVLLE
Trigger: TTCTAACAGCACCCTTGAGCAATGCACACTTATCCC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGCCGAAACTGGTTGTTaGCAGGAAAAGTTATATGTT +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKAETGC*QEKLYV
Trigger: AACATATAACTTTTCCTGGCAACAACCAGTTTCGGC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGTTAAGCGCCTATCGTaGTGCACTAATATAGTGCAA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQVKRLS*CTNIVQ
Trigger: TTGCACTATATTAGTGCAGCACGATAGGCGCTTAAC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTTGGGTCTCTCGGCCTaGTTACAGTTAGTATGCAGT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNLGLSA*LQLVCS
Trigger: ACTGCATACTAACTGTAAGCAGGCCGAGAGACCCAA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGACACGATGCAATCTTaGTGGCAAGGAATGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNDTMQS*WQGMRQ
Trigger: TTGCCTCATTCCTTGCCAGCAAGATTGCATCGTGTC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAAAAATTCAGACACGATaGAATCTTGCTGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKKIQTR*NLAGKE
Trigger: TTCCTTGCCAGCAAGATTGCATCGTGTCTGAATTTT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
40% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGGAAGATGGCATCTCTaGACAGCTGTCTGTCAACTT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNGRWHL*TAVCQL
Trigger: AAGTTGACAGACAGCTGTGCAGAGATGCCATCTTCC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTTCTTGCAAAGCACTaGTATTTGGACAGCGAATTC +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLLAKH*YLDSEF
Trigger: GAATTCGCTGTCCAAATAGCAGTGCTTTGCAAGAAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGATCGTAGCATGCCATTaGTTGGTAACGATATCCTTG +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQIVACH*LVTISL
Trigger: CAAGGATATCGTTACCAAGCAATGGCATGCTACGAT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTGCTGTATTCTGCATaGATCTCACTTTTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLLYSA*ISLFGF
Trigger: AAACCCGAAAAGTGAGATGCATGCAGAATACAGCAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAAATATTGTTCCACTGTaGCATTCCCAGGGCTACATC +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFINIVPL*HSQGYI
Trigger: GATGTAGCCCTGGGAATGGCACAGTGGAACAATATT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGATGTACAGCCCGACTaGTTTTCACATCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIDVQPD*FSHLLF
Trigger: AAAGAGGAGATGTGAAAACCAGTCGGGCTGTACATC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGATGTACAGCCCGACTaGTTTTCACATCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNDVQPD*FSHLLF
Trigger: AAAGAGGAGATGTGAAAACCAGTCGGGCTGTACATC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTTAATCCACACAGTTTaGATACATTTGTTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPLIHTV*IHLLWP
Trigger: AGGCCACAACAAATGTATCCAAACTGTGTGGATTAA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCATTTTTCTCCGCTCTTaGAACGTCTTTTCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPIFLRS*NVFSKS
Trigger: ACTCTTTGAAAAGACGTTCCAAGAGCGGAGAAAAAT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCAAAGCACTGCTATTTaGACAGCGAATTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNQSTAI*TANSTF
Trigger: GAAGGTGGAATTCGCTGTCCAAATAGCAGTGCTTTG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCATACACCTGTGCCTaGTTGACATGGTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSYTCA*LTWSSL
Trigger: CAAACTGGACCATGTCAACCAGGCACAGGTGTATGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423059.9
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAAACACATTGGGTCCATaGACCCCATTCAGATATCAC +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFINTLGP*TPFRYH
Trigger: GTGATATCTGAATGGGGTCCATGGACCCAATGTGTT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATAACACATTGGGTCCATaGACCCCATTCAGATATCAC +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNNTLGP*TPFRYH
Trigger: GTGATATCTGAATGGGGTCCATGGACCCAATGTGTT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCATCAGGGAAGGGCATaGTCTTCCATCACCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNHQGRA*SSITLK
Trigger: TTTCAAGGTGATGGAAGACCATGCCCTTCCCTGATG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCAGGAGGATATGGGATaGTCTAAAGCAAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNQEDMG*SKASVG
Trigger: GCCTACACTTGCTTTAGACCATCCCATATCCTCCTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
3UTR CAA 72 bp ATATTTATAAACAGGAGATCCCAGATCATTTGGGAATaGTGCTTCTCATGTACTATTGAGACCCACGTCAGC +
Preference number: 4 (lower is better)
Translates to: IFINRRSQIIWE*CFSCTIETHVS
Trigger: GCTGACGTGGGTCTCAATAGTACATGAGAAGCACAATTCCCAAATGATCTGGGATCTCCTGTTTATAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATACAACTCCATCTCCTTaGGACAAACAGGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNTTPSP*DKQGSF
Trigger: AAAAGAACCCTGTTTGTCTCAAGGAGATGGAGTTGT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCTTCTCCATCACTGTTaGTGCACACAACCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNLLHHC*CTQPLE
Trigger: TTCAAGAGGTTGTGTGCATCAACAGTGATGGAGAAG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAAAAGACTATGGATTTTaGAATAACTGCCTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKKDYGF*NNCLQD
Trigger: GTCTTGCAGGCAGTTATTTCAAAATCCATAGTCTTT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATCATTTTGGGGACAATaGCATCCTAACCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFISFWGQ*HPNLMS
Trigger: AGACATCAGGTTAGGATGTCATTGTCCCCAAAATGA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACCCATTTTTAAGATCTaGCTTGGTAGAAACACAGAA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKPIFKI*LGRNTE
Trigger: TTCTGTGTTTCTACCAAGTCAGATCTTAAAAATGGG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTTCAGTCGGTTGTTTTaGCTTCTTTGGGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQFSRLF*LLWGFF
Trigger: AAAGAAACCCCAAAGAAGGCAAAACAACCGACTGAA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGTTAAGCGCCTATCGTaGTGCACTAATATAGTGCAA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIVKRLS*CTNIVQ
Trigger: TTGCACTATATTAGTGCAGCACGATAGGCGCTTAAC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACAATTTCACAATGGCTaGAGTGATGAGGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIQFHNG*SDEEVC
Trigger: ACACACTTCCTCATCACTGCAGCCATTGTGAAATTG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAATTGGAAGCTTCTCTTaGTGGCAAAAGCTTAAATCA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKIGSFS*WQKLKS
Trigger: TGATTTAAGCTTTTGCCAGCAAGAGAAGCTTCCAAT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTACACTGTGCAAGGATaGTCATTACAGCTTCGTACT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNYTVQG*SLQLRT
Trigger: AGTACGAAGCTGTAATGAGCATCCTTGCACAGTGTA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATACACTGTGCAAGGATaGTCATTACAGCTTCGTACT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIYTVQG*SLQLRT
Trigger: AGTACGAAGCTGTAATGAGCATCCTTGCACAGTGTA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGTTCCCCACAGGTTGTaGATTATATTTGTCACAAGG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNVPHRL*IIFVTR
Trigger: CCTTGTGACAAATATAATGCACAACCTGTGGGGAAC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAATTTTGATCGTAGCATaGCATTGCTTGGTAACGATA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKILIVA*HCLVTI
Trigger: TATCGTTACCAAGCAATGGCATGCTACGATCAAAAT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAATGTTTCCACAAGCCTaGCATTTTGATCGTAGCATG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIMFPQA*HFDRSM
Trigger: CATGCTACGATCAAAATGGCAGGCTTGTGGAAACAT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTTCAGAAGGGCCATCTaGTGTATTCTGCATGCATCT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNFRRAI*CILHAS
Trigger: AGATGCATGCAGAATACAGCAGATGGCCCTTCTGAA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAACCTTTGCCGGAAACTaGTTTGATTGCAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFITFAGN*FDCKAK
Trigger: TTTTGCCTTGCAATCAAAGCAGTTTCCGGCAAAGGT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTCAGGTCAACTGACTTaGCATCACTTCGAACACAAT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSGQLT*HHFEHN
Trigger: ATTGTGTTCGAAGTGATGGCAAGTCAGTTGACCTGA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGATCAGGCATCCTAACTaGCCAATTCCACCATTATTT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQIRHPN*PIPPLF
Trigger: AAATAATGGTGGAATTGGCCAGTTAGGATGCCTGAT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATTTCTATGGCAATACTaGTTAAGCGCCTATCGTGCT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIFLWQY*LSAYRA
Trigger: AGCACGATAGGCGCTTAACCAGTATTGCCATAGAAA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTTTCTATGGCAATACTaGTTAAGCGCCTATCGTGCT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNFLWQY*LSAYRA
Trigger: AGCACGATAGGCGCTTAACCAGTATTGCCATAGAAA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAAGAGGCAGTTTCTATaGCAATACTGGTTAAGCGCC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNKRQFL*QYWLSA
Trigger: GGCGCTTAACCAGTATTGCCATAGAAACTGCCTCTT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAAACTTCACATTCAGTTaGACAAGGAATGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFINFTFS*TRNVAQ
Trigger: CTGTGCCACATTCCTTGTCCAACTGAATGTGAAGTT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATAACTTCACATTCAGTTaGACAAGGAATGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNNFTFS*TRNVAQ
Trigger: CTGTGCCACATTCCTTGTCCAACTGAATGTGAAGTT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATGTCCAGTCACTATATaGGGTCACAATACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFICPVTI*GHNTVL
Trigger: AAGGACTGTATTGTGACCCCATATAGTGACTGGACA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATAAAACTTGGACCAGCTaGTCAATTGACAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNKTWTS*SIDSHP
Trigger: AGGATGACTGTCAATTGACCAGCTGGTCCAAGTTTT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATTTGACCAGTGGATTTaGTGTAAATCAGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKFDQWI*CKSGCS
Trigger: TGAACATCCTGATTTACACCAAATCCACTGGTCAAA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCACTGTCTTGTGGTGTaGAATGTGAACAAAGACTCG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNHCLVV*NVNKDS
Trigger: CGAGTCTTTGTTCACATTCCACACCACAAGACAGTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACGACCACCAAGATGCTaGATTTATTCAGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIRPPRC*IYSVDF
Trigger: AAAATCCACTGAATAAATTCAGCATCTTGGTGGTCG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCTGGGCACAGATGCTaGTTCTCTAGTTCTTGTATA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSGHRC*FSSSCI
Trigger: TATACAAGAACTAGAGAATCAGCATCTGTGCCCAGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGACGTGAATTTACCTTaGAATGCCCAGGAACTTAAC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNDVNLP*NAQELN
Trigger: GTTAAGTTCCTGGGCATTTCAAGGTAAATTCACGTC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCACACTCTGAGTGAGTaGCACTTTGATTCTAATAGG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNHTLSE*HFDSNR
Trigger: CCTATTAGAATCAAAGTGTCACTCACTCAGAGTGTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGAGATTTTTGATCACTaGAAACATGACTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQEIFDH*KHDSHK
Trigger: TTTGTGGGAGTCATGTTTTCAGTGATCAAAAATCTC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATACTTTGAAACAATTCTaGTGGTTATTGGGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNTLKQF*WLLGLS
Trigger: CGAGAGACCCAATAACCAGCAGAATTGTTTCAAAGT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCAGCTTCGTACTTCTTaGAAAGCACTGCTATTTGGA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNQLRTS*KALLFG
Trigger: TCCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCAGGTCAACTGACTTaGCATCACTTCGAACACAAT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSGQLT*HHFEHN
Trigger: ATTGTGTTCGAAGTGATGGCAAGTCAGTTGACCTGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGATTCCTCACAGATTTaGTCAAGGACTACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQDSSQI*SRTTVF
Trigger: AAAAACAGTAGTCCTTGAGCAAATCTGTGAGGAATC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAAAGCTCTTCATATACTaGCCATTTTTAAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKKLFIY*PFLRSD
Trigger: GTCAGATCTTAAAAATGGGCAGTATATGAAGAGCTT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATACCCTTCTTCACAATaGCATGTTTTTGTCTCGCTA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIYPSSQ*HVFVSL
Trigger: TAGCGAGACAAAAACATGCCATTGTGAAGAAGGGTA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTGGATACATTTGTTGTaGCCTCTGGACATCTATGAA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNWIHLL*PLDIYE
Trigger: TTCATAGATGTCCAGAGGCCACAACAAATGTATCCA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTGTCCAGTCACTATATaGGGTCACAATACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNCPVTI*GHNTVL
Trigger: AAGGACTGTATTGTGACCCCATATAGTGACTGGACA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAGCCCTTCCAAGCACTaGCCATCCATTTATATTCAT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSPSKH*PSIYIH
Trigger: ATGAATATAAATGGATGGCCAGTGCTTGGAAGGGCT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACATAAGAGGGTTAGCTaGATTTTTCAAGTAACCACA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIHKRVS*IFQVTT
Trigger: TGTGGTTACTTGAAAAATTCAGCTAACCCTCTTATG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTATCCTAACAAACAGTaGCCTTCCAATATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNYPNKQ*PSNMFS
Trigger: AGAGAACATATTGGAAGGTCACTGTTTGTTAGGATA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTTCAGTCGGTTGTTTTaGCTTCTTTGGGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNFSRLF*LLWGFF
Trigger: AAAGAAACCCCAAAGAAGGCAAAACAACCGACTGAA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACACTTTGAAACAATTCTaGTGGTTATTGGGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNTLKQF*WLLGLS
Trigger: CGAGAGACCCAATAACCAGCAGAATTGTTTCAAAGT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATATTGGAAGCTTCTCTTaGTGGCAAAAGCTTAAATCA +
Preference number: 4 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNIGSFS*WQKLKS
Trigger: TGATTTAAGCTTTTGCCAGCAAGAGAAGCTTCCAAT...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAATTTTGATCGTAGCATaGCATTGCTTGGTAACGATA +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIILIVA*HCLVTI
Trigger: TATCGTTACCAAGCAATGGCATGCTACGATCAAAAT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTACCCTTCTTCACAATaGCATGTTTTTGTCTCGCTA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNYPSSQ*HVFVSL
Trigger: TAGCGAGACAAAAACATGCCATTGTGAAGAAGGGTA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACATTTGTTGTGGCCTCTaGACATCTATGAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNICCGL*TSMKSE
Trigger: TTCTGACTTCATAGATGTCCAGAGGCCACAACAAAT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGAAACTCCTAATACTGTaGCCTAAAGACATGTACATT +
Preference number: 4 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQKLLIL*PKDMYI
Trigger: AATGTACATGTCTTTAGGCCACAGTATTAGGAGTTT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAGATCCCAGATCATTTaGGAATTGTGCTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNRSQII*ELCFSC
Trigger: ACATGAGAAGCACAATTCCCAAATGATCTGGGATCT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR TCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAAAGACTATGGATTTTaGAATAACTGCCTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNKDYGF*NNCLQD
Trigger: GTCTTGCAGGCAGTTATTTCAAAATCCATAGTCTTT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCGTACAACTCTTTGTaGCAATCGCAAACTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSYNSL*QSQTLK
Trigger: TTTCAAAGTTTGCGATTGGCACAAAGAGTTGTACGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR GCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATTTGAAATAACTGCCTaGAAGACAGACATTCAATCT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIFEITA*KTDIQS
Trigger: AGATTGAATGTCTGTCTTGCAGGCAGTTATTTCAAA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CCA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTTAAATATCTCCAGTaGCAGTATGATTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFILKYLQ*QYDFHS
Trigger: AGAGTGAAAATCATACTGCCACTGGAGATATTTAAG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp AGGTTTGGACAGCCAGAGCCTCCGAACTGCGGGGGCGCCACCACATaGCGCGTCCGGTGCTGGAGCCCGCTGCCGCAGGTCTTGGAGCAT +
Preference number: 5 (lower is better)
Translates to: RFGQPEPPNCGGATT*RVRCWSPLPQVLEH
Trigger: ATGCTCCAAGACCTGCGGCAGCGGGCTCCAGCACCGGACGCGTCATGTGGTGGCGCCCCCGCAGTTCGGAGGCTCTGGCTGTCCAAACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 90 bp ACTGCGGGGGCGCCACCACATGACGCGTCCGGTGCTGGAGCCCGCTaGCGCAGGTCTTGGAGCATTCGGACCAGGCAGAAAATTCAGACA +
Preference number: 5 (lower is better)
Translates to: TAGAPPHDASGAGAR*RRSWSIRTRQKIQT
Trigger: TGTCTGAATTTTCTGCCTGGTCCGAATGCTCCAAGACCTGCGGCAGCGGGCTCCAGCACCGGACGCGTCATGTGGTGGCGCCCCCGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp GGCCTCGCATGGACTGGATTGGCACACCTGGAACTCCGTCAGGTTTaGACAGCCAGAGCCTCCGAACTGCGGGGGCGCCACCACATGACG +
Preference number: 5 (lower is better)
Translates to: GLAWTGLAHLELRQV*TARASELRGRHHMT
Trigger: CGTCATGTGGTGGCGCCCCCGCAGTTCGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp CCAGGGCCCCACATGCAGGCTGTACCTGAGCTCCTCGGCCTCGCATaGACTGGATTGGCACACCTGGAACTCCGTCAGGTTTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: PGPHMQAVPELLGLA*TGLAHLELRQVWTA
Trigger: GGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAGCTCAGGTACAGCCTGCATGTGGGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp CCCCCTCCACAGAGGGCCGTCTGGTTGCCGCGCCTCTTGTCCTGCTaGCTGAGCAAAGGGTCCACACGGCACTCAGTCCACTCTGTAGTT +
Preference number: 5 (lower is better)
Translates to: PPPQRAVWLPRLLSC*LSKGSTRHSVHSVV
Trigger: AACTACAGAGTGGACTGAGTGCCGTGTGGACCCTTTGCTCAGTCAGCAGGACAAGAGGCGCGGCAACCAGACGGCCCTCTGTGGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp CTGTACCTGAGCTCCTCGGCCTCGCATGGACTGGATTGGCACACCTaGAACTCCGTCAGGTTTGGACAGCCAGAGCCTCCGAACTGCGGG +
Preference number: 5 (lower is better)
Translates to: LYLSSSASHGLDWHT*NSVRFGQPEPPNCG
Trigger: CCCGCAGTTCGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAGCTCAGGTACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp ACATGCAGGCTGTACCTGAGCTCCTCGGCCTCGCATGGACTGGATTaGCACACCTGGAACTCCGTCAGGTTTGGACAGCCAGAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: TCRLYLSSSASHGLD*HTWNSVRFGQPEPP
Trigger: CGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAGCTCAGGTACAGCCTGCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp CCACCACATGACGCGTCCGGTGCTGGAGCCCGCTGCCGCAGGTCTTaGAGCATTCGGACCAGGCAGAAAATTCAGACACGATGCAATCTT +
Preference number: 5 (lower is better)
Translates to: PPHDASGAGARCRRS*SIRTRQKIQTRCNL
Trigger: AAGATTGCATCGTGTCTGAATTTTCTGCCTGGTCCGAATGCTCCAAGACCTGCGGCAGCGGGCTCCAGCACCGGACGCGTCATGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp GGAGGACCACGTAGACCATGTGCTGAGCACACAGTCTTTCGGGCATaGGGCATCACAGGCCACAGGGATGGGGAAGATGGCATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: GGPRRPCAEHTVFRA*GITGHRDGEDGISA
Trigger: TGCAGAGATGCCATCTTCCCCATCCCTGTGGCCTGTGATGCCCCATGCCCGAAAGACTGTGTGCTCAGCACATGGTCTACGTGGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp GGAGGCCTCCCCATTCCAAGTCGTAGTTGTGTTGAAGGACGATACTaGGGTGTCCTCAATGCACTGGCCCCAGGGACCAGTTTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GGLPIPSRSCVEGRY*GVLNALAPGTSLPV
Trigger: CACTGGCAAACTGGTCCCTGGGGCCAGTGCATTGAGGACACCTCAGTATCGTCCTTCAACACAACTACGACTTGGAATGGGGAGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp GCCTGGGTAAGGGCTGGCACAGGGCCTGCATACTGTAGGCACTCATaGATTCCAGCCTGTCCTCCATCTTGCTTGCGACAAGTAATGGCT +
Preference number: 5 (lower is better)
Translates to: AWVRAGTGPAYCRHS*IPACPPSCLRQVMA
Trigger: AGCCATTACTTGTCGCAAGCAAGATGGAGGACAGGCTGGAATCCATGAGTGCCTACAGTATGCAGGCCCTGTGCCAGCCCTTACCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp AGGCTTCACTGGGCAGGGTTTGGACTGGTCCATCAGGGAAGGGCATaGTCTTCCATCACCTTGAAAGGGCTGGGTCACTGTTCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: RLHWAGFGLVHQGRA*SSITLKGLGHCSSS
Trigger: CGAAGACGAACAGTGACCCAGCCCTTTCAAGGTGATGGAAGACCATGCCCTTCCCTGATGGACCAGTCCAAACCCTGCCCAGTGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp GCATGGAGACCACTGGCCATATTGCCACCGATAACAAGGCTTCACTaGGCAGGGTTTGGACTGGTCCATCAGGGAAGGGCATGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: AWRPLAILPPITRLH*AGFGLVHQGRAWSS
Trigger: GGAAGACCATGCCCTTCCCTGATGGACCAGTCCAAACCCTGCCCAGTGAAGCCTTGTTATCGGTGGCAATATGGCCAGTGGTCTCCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp GCCTGGGTAAGGGCTGGCACAGGGCCTGCATACTGTAGGCACTCATaGATTCCAGCCTGTCCTCCATCTTGCTTGCGACAAGTAATGGCA +
Preference number: 5 (lower is better)
Translates to: AWVRAGTGPAYCRHS*IPACPPSCLRQVMA
Trigger: TGCCATTACTTGTCGCAAGCAAGATGGAGGACAGGCTGGAATCCATGAGTGCCTACAGTATGCAGGCCCTGTGCCAGCCCTTACCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497575.1
CDS GCA 90 bp GCGCCATTTGTGAGTCTTCCACCTGTAGCTTTGGCACGCTTGAGGTaGCTCACAGGCCTTCTCTTCATAGAGGGGATCTGTGCAGTCTCG +
Preference number: 5 (lower is better)
Translates to: APFVSLPPVALARLR*LTGLLFIEGICAVS
Trigger: CGAGACTGCACAGATCCCCTCTATGAAGAGAAGGCCTGTGAGGCACCTCAAGCGTGCCAAAGCTACAGGTGGAAGACTCACAAATGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp CTTCTCTTCATAGAGGGGATCTGTGCAGTCTCGGCCCCCGTTGGCTaGCAGCTGAATGATGACCCGATGCCTAGACTGCTTCCTGATACT +
Preference number: 5 (lower is better)
Translates to: LLFIEGICAVSAPVG*QLNDDPMPRLLPDT
Trigger: AGTATCAGGAAGCAGTCTAGGCATCGGGTCATCATTCAGCTGCCAGCCAACGGGGGCCGAGACTGCACAGATCCCCTCTATGAAGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp ATGCTCCAGGGCTCTGTGACCCATAGGTACTGGTTGCAGTCACTGTaGCATGGGACAACCTCATACACCTGTGCCTGGTTGACATGGTCC +
Preference number: 5 (lower is better)
Translates to: MLQGSVTHRYWLQSL*HGTTSYTCAWLTWS
Trigger: GGACCATGTCAACCAGGCACAGGTGTATGAGGTTGTCCCATGCCACAGTGACTGCAACCAGTACCTATGGGTCACAGAGCCCTGGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423059.9
CDS CCA 90 bp AAGGTCACCTTGCAGATGCTCCAGGGCTCTGTGACCCATAGGTACTaGTTGCAGTCACTGTGGCATGGGACAACCTCATACACCTGTGCC +
Preference number: 5 (lower is better)
Translates to: KVTLQMLQGSVTHRY*LQSLWHGTTSYTCA
Trigger: GGCACAGGTGTATGAGGTTGTCCCATGCCACAGTGACTGCAACCAGTACCTATGGGTCACAGAGCCCTGGAGCATCTGCAAGGTGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423059.9
CDS TCA 90 bp CCCGCATATTCACAAAGGTCACCTTGCAGATGCTCCAGGGCTCTGTaGCCCATAGGTACTGGTTGCAGTCACTGTGGCATGGGACAACCT +
Preference number: 5 (lower is better)
Translates to: PAYSQRSPCRCSRAL*PIGTGCSHCGMGQP
Trigger: AGGTTGTCCCATGCCACAGTGACTGCAACCAGTACCTATGGGTCACAGAGCCCTGGAGCATCTGCAAGGTGACCTTTGTGAATATGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 90 bp CCCACTTGGCCCACATTGACTCGCACACAGATGACTTTTCTTGTCTaGATGCCGACAGAGCAGGAGGCCTCCCCATTCCAAGTCGTAGTT +
Preference number: 5 (lower is better)
Translates to: PTWPTLTRTQMTFLV*MPTEQEASPFQVVV
Trigger: AACTACGACTTGGAATGGGGAGGCCTCCTGCTCTGTCGGCATGCAGACAAGAAAAGTCATCTGTGTGCGAGTCAATGTGGGCCAAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 90 bp CTCCAGGGCTGTCTTGTTGCACGCTCCAAGGGACTAATTGGCATCTaGGCCATTTGTGAGTCTTCCACCTGTAGCTTTGGCACGCTTGAG +
Preference number: 5 (lower is better)
Translates to: LQGCLVARSKGLIGI*AICESSTCSFGTLE
Trigger: CTCAAGCGTGCCAAAGCTACAGGTGGAAGACTCACAAATGGCGCAGATGCCAATTAGTCCCTTGGAGCGTGCAACAAGACAGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp CAAATGGCTGTAGAAACCAGGTCCTTCCCCGTCCTGCTGGGTTACTaGAGGGTTGGGTTGGATGTACAGCCCGACTGGTTTTCACATCTC +
Preference number: 5 (lower is better)
Translates to: QMAVETRSFPVLLGY*RVGLDVQPDWFSHL
Trigger: GAGATGTGAAAACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGTAACCCAGCAGGACGGGGAAGGACCTGGTTTCTACAGCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp GTCTCACTGCTTTCCAGTCATAACAGGCAGGCTCTTCACAGGGAATaGCTTCCAGTAAGTGAGGGCAGTTTCCGGTTACCCCAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: VSLLSSHNRQALHRE*LPVSEGSFRLPQSL
Trigger: GAGGCTCTGGGGTAACCGGAAACTGCCCTCACTTACTGGAAGCCATTCCCTGTGAAGAGCCTGCCTGTTATGACTGGAAAGCAGTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS GCA 90 bp CCTCAATGCACTGGCCCCAGGGACCAGTTTGCCAGTGGTACACTGTaGAAGGATGCTCATTACAGCTTCGTACTTCTTGCAAAGCACTGC +
Preference number: 5 (lower is better)
Translates to: PQCTGPRDQFASGTL*KDAHYSFVLLAKHC
Trigger: GCAGTGCTTTGCAAGAAGTACGAAGCTGTAATGAGCATCCTTGCACAGTGTACCACTGGCAAACTGGTCCCTGGGGCCAGTGCATTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 90 bp GACGATACTGAGGTGTCCTCAATGCACTGGCCCCAGGGACCAGTTTaGCAGTGGTACACTGTGCAAGGATGCTCATTACAGCTTCGTACT +
Preference number: 5 (lower is better)
Translates to: DDTEVSSMHWPQGPV*QWYTVQGCSLQLRT
Trigger: AGTACGAAGCTGTAATGAGCATCCTTGCACAGTGTACCACTGGCAAACTGGTCCCTGGGGCCAGTGCATTGAGGACACCTCAGTATCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp GCATGTTTTTGTCTCGCTACAGTACGAGTGGGGTTGACTACACGGTaGGTTACAAGACCTGTCGGCATCAGGCTGGCTCATCACCAAGCA +
Preference number: 5 (lower is better)
Translates to: ACFCLATVRVGLTTR*VTRPVGIRLAHHQA
Trigger: TGCTTGGTGATGAGCCAGCCTGATGCCGACAGGTCTTGTAACCCACCGTGTAGTCAACCCCACTCGTACTGTAGCGAGACAAAAACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp ACTGAGGTGTCCTCAATGCACTGGCCCCAGGGACCAGTTTGCCAGTaGTACACTGTGCAAGGATGCTCATTACAGCTTCGTACTTCTTGC +
Preference number: 5 (lower is better)
Translates to: TEVSSMHWPQGPVCQ*YTVQGCSLQLRTSC
Trigger: GCAAGAAGTACGAAGCTGTAATGAGCATCCTTGCACAGTGTACCACTGGCAAACTGGTCCCTGGGGCCAGTGCATTGAGGACACCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp ACTGGCCATATTGCCACCGATAACAAGGCTTCACTGGGCAGGGTTTaGACTGGTCCATCAGGGAAGGGCATGGTCTTCCATCACCTTGAA +
Preference number: 5 (lower is better)
Translates to: TGHIATDNKASLGRV*TGPSGKGMVFHHLE
Trigger: TTCAAGGTGATGGAAGACCATGCCCTTCCCTGATGGACCAGTCCAAACCCTGCCCAGTGAAGCCTTGTTATCGGTGGCAATATGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCCTCCAGTGGGCTCATaGGTAATGCGCCGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEPPVGS*VMRRFL
Trigger: GAGGAAGCGGCGCATTACCAATGAGCCCACTGGAGG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCCACTCCCACAGGACTaGCTGCAGCGCGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCPLPQD*LQRDQL
Trigger: CAACTGGTCGCGCTGCAGCAAGTCCTGTGGGAGTGG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp GGCAAGCCTGCTCCAGGAGAGGCTTGGGCTCAAAGTACTCACAGATaGTATCCTCCGCAGGAATGTCTTTGTCTTTCTGGATGCACGCTA +
Preference number: 5 (lower is better)
Translates to: GKPAPGEAWAQSTHR*YPPQECLCLSGCTL
Trigger: TAGCGTGCATCCAGAAAGACAAAGACATTCCTGCGGAGGATATCATCTGTGAGTACTTTGAGCCCAAGCCTCTCCTGGAGCAGGCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp ACCAGGCAGAAAATTCAGACACGATGCAATCTTGCTGGCAAGGAATaGGGCAAGCCTGCTCCAGGAGAGGCTTGGGCTCAAAGTACTCAC +
Preference number: 5 (lower is better)
Translates to: TRQKIQTRCNLAGKE*GKPAPGEAWAQSTH
Trigger: GTGAGTACTTTGAGCCCAAGCCTCTCCTGGAGCAGGCTTGCCTCATTCCTTGCCAGCAAGATTGCATCGTGTCTGAATTTTCTGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp GGTTTGGACTGGTCCATCAGGGAAGGGCATGGTCTTCCATCACCTTaGAAGGGCTGGGTCACTGTTCGTCTTCGGATCATTTTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GLDWSIREGHGLPSP*KGWVTVRLRIIFPV
Trigger: CACAGGAAAAATGATCCGAAGACGAACAGTGACCCAGCCCTTTCAAGGTGATGGAAGACCATGCCCTTCCCTGATGGACCAGTCCAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp CTCATCACCAAGCAGCCCCCTGTTACATTTATACCATCTGACCTTTaGCACCACACTGTTCGGGAAGAGCCCTTCCAAGCACTGGCCATC +
Preference number: 5 (lower is better)
Translates to: LITKQPPVTFIPSDL*HHTVREEPFQALAI
Trigger: GATGGCCAGTGCTTGGAAGGGCTCTTCCCGAACAGTGTGGTGTCAAAGGTCAGATGGTATAAATGTAACAGGGGGCTGCTTGGTGATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 90 bp ACCACACTCCTTTCCGTTATCTGGCTCGCAGTTTCCCAGTCTCACTaGTTTCCAGTCATAACAGGCAGGCTCTTCACAGGGAATGGCTTC +
Preference number: 5 (lower is better)
Translates to: TTLLSVIWLAVSQSH*FPVITGRLFTGNGF
Trigger: GAAGCCATTCCCTGTGAAGAGCCTGCCTGTTATGACTGGAAAGCAGTGAGACTGGGAAACTGCGAGCCAGATAACGGAAAGGAGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS CCA 90 bp GTCCTGCTGGGTTACTGGAGGGTTGGGTTGGATGTACAGCCCGACTaGTTTTCACATCTCCTCTTTTGTCCTCCATGGTGGGTAATACCA +
Preference number: 5 (lower is better)
Translates to: VLLGYWRVGLDVQPD*FSHLLFCPPWWVIP
Trigger: TGGTATTACCCACCATGGAGGACAAAAGAGGAGATGTGAAAACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGTAACCCAGCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTGGGTTACTGGAGGGTaGGGTTGGATGTACAGCCCG +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEWVTGG*GWMYSP
Trigger: CGGGCTGTACATCCAACCCAACCCTCCAGTAACCCA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGGAACTCCGTCAGGTTaGGACAGCCAGAGCCTCCGA +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCGTPSG*DSQSLR
Trigger: TCGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTCC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCTCGCATGGACTGGATaGGCACACCTGGAACTCCGT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELAWTG*AHLELR
Trigger: ACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGAGAGGAGGTTTTCGTaGGCCTGCACGCAGTACACC +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEERRFS*ACTQYT
Trigger: GGTGTACTGCGTGCAGGCCAACGAAAACCTCCTCTC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCTTCCACCTGTAGCTTaGGCACGCTTGAGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELPPVA*ARLRCL
Trigger: GAGGCACCTCAAGCGTGCCAAAGCTACAGGTGGAAG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTGCTCCAGGGCTGTCTaGTTGCACGCTCCAAGGGAC +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCCSRAV*LHAPRD
Trigger: GTCCCTTGGAGCGTGCAACAAGACAGCCCTGGAGCA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp CTTCAAATTCTGGACACTCCTTTTCACTGCCAATGGGAAACTGCCTaGTGGTTCGTGTCCTTACACGAGTGCCTGCAGGGGACACCATGT +
Preference number: 5 (lower is better)
Translates to: LQILDTPFHCQWETA*WFVSLHECLQGTPC
Trigger: ACATGGTGTCCCCTGCAGGCACTCGTGTAAGGACACGAACCATCAGGCAGTTTCCCATTGGCAGTGAAAAGGAGTGTCCAGAATTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp TGCTTGCGACAAGTAATGGCATCACTGTTGATGCACACAACCTCTTaGACTTGCGTGCCTGGACCACACTCCTTTCCGTTATCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: CLRQVMASLLMHTTS*TCVPGPHSFPLSGS
Trigger: CGAGCCAGATAACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGCCATTACTTGTCGCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497575.1
CDS GCA 90 bp AAGGAGACCAATCAGAAAGCTGACAGTTCACAGGGCATTCCACCATaGAGGACGTGTTCATCTGCCAGTTCTTCTCCAAGCCAAGCGCTT +
Preference number: 5 (lower is better)
Translates to: KETNQKADSSQGIPP*RTCSSASSSPSQAL
Trigger: AAGCGCTTGGCTTGGAGAAGAACTGGCAGATGAACACGTCCTGCATGGTGGAATGCCCTGTGAACTGTCAGCTTTCTGATTGGTCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp TTCTCCATCACTGTTGATGCACACAACCTCTTGAACTTGCGTGCCTaGACCACACTCCTTTCCGTTATCTGGCTCGCAGTTTCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: FSITVDAHNLLNLRA*TTLLSVIWLAVSQS
Trigger: AGACTGGGAAACTGCGAGCCAGATAACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp AATGGCATCACTGTTGATGCACACAACCTCTTGAACTTGCGTGCCTaGACCACACTCCTTTCCGTTATCTGGCTCGCAGTTTCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: NGITVDAHNLLNLRA*TTLLSVIWLAVSQS
Trigger: AGACTGGGAAACTGCGAGCCAGATAACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497575.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTGGGTTACTGGAGGGTaGGGTTGGATGTACAGCCCG +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCWVTGG*GWMYSP
Trigger: CGGGCTGTACATCCAACCCAACCCTCCAGTAACCCA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCCACACAGCCCTCGTTaGGATGCCTCCGGGACCACA +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPPHSPR*DASGTT
Trigger: TGTGGTCCCGGAGGCATCCAAACGAGGGCTGTGTGG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTTGACATGGTCCAGTTaGGGGCAAGGCCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLELTWSS*GQGLPP
Trigger: TGGAGGAAGGCCTTGCCCCAAACTGGACCATGTCAA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGACCCATAGGTACTGGTaGCAGTCACTGTGGCATGGG +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLETHRYW*QSLWHG
Trigger: CCCATGCCACAGTGACTGCAACCAGTACCTATGGGT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp TGTCTGTCAACTTCTTCTCCATCACTGTTGATGCACACAACCTCTTaGACTTGCGTGCCTGGACCACACTCCTTTCCGTTATCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: CLSTSSPSLLMHTTS*TCVPGPHSFPLSGS
Trigger: CGAGCCAGATAACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGGAGAAGAAGTTGACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp TATTTGGACAGCGAATTCCACCTTCTTCACCCGCATAGGCCAGAATaGATCGTGCTCGTATCTGTTTCCCTTCTGTCGTTTTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: YLDSEFHLLHPHRPE*IVLVSVSLLSFSLS
Trigger: GCTCAGGGAAAACGACAGAAGGGAAACAGATACGAGCACGATCCATTCTGGCCTATGCGGGTGAAGAAGGTGGAATTCGCTGTCCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACCACACAGCCCTCGTTaGGATGCCTCCGGGACCACA +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKPHSPR*DASGTT
Trigger: TGTGGTCCCGGAGGCATCCAAACGAGGGCTGTGTGG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCCGCTGCCGCAGGTCTaGGAGCATTCGGACCAGGCA +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQPLPQV*EHSDQA
Trigger: TGCCTGGTCCGAATGCTCCAAGACCTGCGGCAGCGG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCCTCCAGTGGGCTCATaGGTAATGCGCCGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPPPVGS*VMRRFL
Trigger: GAGGAAGCGGCGCATTACCAATGAGCCCACTGGAGG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGATGCACACAACCTCTaGAACTTGCGTGCCTGGACC +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCDAHNL*NLRAWT
Trigger: GGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGAGCCTGTCCTCCATCTaGCTTGCGACAAGTAATGGC +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESLSSI*LATSNG
Trigger: GCCATTACTTGTCGCAAGCAAGATGGAGGACAGGCT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp AAGAGTGCGCTTTCTGGTCCTAACTGCACCACAGTCTCCATTGCATaGAGAAAACTTGGACCAGCTGGTCAATTGACAGTCATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: KSALSGPNCTTVSIA*RKLGPAGQLTVILA
Trigger: TGCCAGGATGACTGTCAATTGACCAGCTGGTCCAAGTTTTCTTCATGCAATGGAGACTGTGGTGCAGTTAGGACCAGAAAGCGCACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS GCA 90 bp TTGTCCTCCATGGTGGGTAATACCACCACGGGGATAAGTGTGCATTaGTCAAGGGTGCTGTTAGAAGACATGACTTCAGTGTACCCTTCT +
Preference number: 5 (lower is better)
Translates to: LSSMVGNTTTGISVH*SRVLLEDMTSVYPS
Trigger: AGAAGGGTACACTGAAGTCATGTCTTCTAACAGCACCCTTGAGCAATGCACACTTATCCCCGTGGTGGTATTACCCACCATGGAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS GCA 90 bp CTGTGCAAGGATGCTCATTACAGCTTCGTACTTCTTGCAAAGCACTaGTATTTGGACAGCGAATTCCACCTTCTTCACCCGCATAGGCCA +
Preference number: 5 (lower is better)
Translates to: LCKDAHYSFVLLAKH*YLDSEFHLLHPHRP
Trigger: TGGCCTATGCGGGTGAAGAAGGTGGAATTCGCTGTCCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTGTAATGAGCATCCTTGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGGGGATAAGTGTGCATaGCTCAAGGGTGCTGTTAGA +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEGDKCA*LKGAVR
Trigger: TCTAACAGCACCCTTGAGCAATGCACACTTATCCCC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACCGCTGCCGCAGGTCTaGGAGCATTCGGACCAGGCA +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIPLPQV*EHSDQA
Trigger: TGCCTGGTCCGAATGCTCCAAGACCTGCGGCAGCGG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGAAACCTGGCACTCTTaGGTGATCACACAGGACTGG +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCETWHS*VITQDW
Trigger: CCAGTCCTGTGTGATCACCAAAGAGTGCCAGGTTTC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCAGAGGGCCGTCTGGTaGCCGCGCCTCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNQRAVW*PRLLSC
Trigger: GCAGGACAAGAGGCGCGGCAACCAGACGGCCCTCTG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGCCCCAGGGACCAGTTaGCCAGTGGTACACTGTGCA +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKAPGTS*PVVHCA
Trigger: TGCACAGTGTACCACTGGCAAACTGGTCCCTGGGGC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGAGACCACTGGCCATATaGCCACCGATAACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLERPLAI*PPITRL
Trigger: AAGCCTTGTTATCGGTGGCAATATGGCCAGTGGTCT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGGCCAAGGATACAGGTaGTTGGGGGAGGTAAATAAG +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEGQGYR*LGEVNK
Trigger: CTTATTTACCTCCCCCAACAACCTGTATCCTTGGCC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp GCAGGAATGTCTTTGTCTTTCTGGATGCACGCTATCTCCCTCACCTaGATACCTTCTTCCCCCTTAATGCACTCAAGAGGTTTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: AGMSLSFWMHAISLT*IPSSPLMHSRGFSR
Trigger: CCTAGAGAAACCTCTTGAGTGCATTAAGGGGGAAGAAGGTATTCAGGTGAGGGAGATAGCGTGCATCCAGAAAGACAAAGACATTCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000480061.1
ENST00000617773.1
CDS CCA 90 bp TCTGACCACTCGGAAACCTGGCACTCTTTGGTGATCACACAGGACTaGAAGGTCATTGGAAGCTTCTCTTGCTGGCAAAAGCTTAAATCA +
Preference number: 5 (lower is better)
Translates to: SDHSETWHSLVITQD*KVIGSFSCWQKLKS
Trigger: TGATTTAAGCTTTTGCCAGCAAGAGAAGCTTCCAATGACCTTCCAGTCCTGTGTGATCACCAAAGAGTGCCAGGTTTCCGAGTGGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACTCGCATGGACTGGATaGGCACACCTGGAACTCCGT +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKLAWTG*AHLELR
Trigger: ACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACCCGCGTCTCCTTGCTaGTCTTACTTGTCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKPASPC*SYLSGV
Trigger: CACTCCCGACAAGTAAGACAAGCAAGGAGACGCGGG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGCAGCTTTCCCCGTCTaGTTAATGCACATAACCTCT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEAAFPV*LMHITS
Trigger: AGAGGTTATGTGCATTAACAAGACGGGGAAAGCTGC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCACAACCTCTTGAACTaGCGTGCCTGGACCACACTC +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPHNLLN*RAWTTL
Trigger: GAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGCAAAGCACTGCTATTaGGACAGCGAATTCCACCTT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEAKHCY*DSEFHL
Trigger: AAGGTGGAATTCGCTGTCCAAATAGCAGTGCTTTGC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCAAGTCGTAGTTGTGTaGAAGGACGATACTGAGGTG +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEQVVVV*KDDTEV
Trigger: CACCTCAGTATCGTCCTTCAACACAACTACGACTTG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGGACCAGCTGGTCAATaGACAGTCATCCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKGPAGQ*TVILAG
Trigger: CCCTGCCAGGATGACTGTCAATTGACCAGCTGGTCC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGCACCACAGTCTCCATaGCATGAAGAAAACTTGGAC +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEAPQSP*HEENLD
Trigger: GTCCAAGTTTTCTTCATGCAATGGAGACTGTGGTGC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGGTAGCATGCCATTGCTaGGTAACGATATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEVACHC*VTISLS
Trigger: GGACAAGGATATCGTTACCAAGCAATGGCATGCTAC...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCACAAGCCTGCCATTTaGATCGTAGCATGCCATTGC +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCHKPAI*IVACHC
Trigger: GCAATGGCATGCTACGATCAAAATGGCAGGCTTGTG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCACAGTACGAGTGGGGTaGACTACACGGTGGGTTACA +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPTVRVG*TTRWVT
Trigger: TGTAACCCACCGTGTAGTCAACCCCACTCGTACTGT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGAAAGGTTTCAGTCGGTaGTTTTGCCTTCTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEKGFSR*FCLLWG
Trigger: ACCCCAAAGAAGGCAAAACAACCGACTGAAACCTTT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGAGCTCTTTCCTGCTATaGTTCGCTTCAGATGAGAAG +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESSFLL*FASDEK
Trigger: CTTCTCATCTGAAGCGAACAATAGCAGGAAAGAGCT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATGCTCCAGGAGAGGCTaGGGCTCAAAGTACTCACAG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKCSRRG*GSKYSQ
Trigger: CTGTGAGTACTTTGAGCCCAAGCCTCTCCTGGAGCA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGGATCCTTTACTCCTTaGCTGCGGTCCTTTTCCCGT +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPGSFTP*LRSFSR
Trigger: ACGGGAAAAGGACCGCAGCAAAGGAGTAAAGGATCC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGATGCACACAACCTCTaGAACTTGCGTGCCTGGACC +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKDAHNL*NLRAWT
Trigger: GGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGCAAAGCACTGCTATTaGGACAGCGAATTCCACCTT +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCAKHCY*DSEFHL
Trigger: AAGGTGGAATTCGCTGTCCAAATAGCAGTGCTTTGC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTGCTCCAGGGCTGTCTaGTTGCACGCTCCAAGGGAC +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNCSRAV*LHAPRD
Trigger: GTCCCTTGGAGCGTGCAACAAGACAGCCCTGGAGCA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCCACTCCCACAGGACTaGCTGCAGCGCGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNPLPQD*LQRDQL
Trigger: CAACTGGTCGCGCTGCAGCAAGTCCTGTGGGAGTGG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAACCCATAGGTACTGGTaGCAGTCACTGTGGCATGGG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKTHRYW*QSLWHG
Trigger: CCCATGCCACAGTGACTGCAACCAGTACCTATGGGT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTTCACAAAGGTCACCTaGCAGATGCTCCAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPFTKVT*QMLQGS
Trigger: AGAGCCCTGGAGCATCTGCAAGGTGACCTTTGTGAA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTCTCACTTTTCGGGTTaGCACGCCCTCTCCACAGTT +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPSHFSG*HALSTV
Trigger: AACTGTGGAGAGGGCGTGCAAACCCGAAAAGTGAGA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTTCAGGTCAACTGACTaGCCATCACTTCGAACACAA +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEFRSTD*PSLRTQ
Trigger: TTGTGTTCGAAGTGATGGCAAGTCAGTTGACCTGAA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCTGGTCTTCCATCACCTaGAAAGGGCTGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPWSSIT*KGLGHC
Trigger: ACAGTGACCCAGCCCTTTCAAGGTGATGGAAGACCA...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATTCACTGGGCAGGGTTaGGACTGGTCCATCAGGGAA +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKFTGQG*DWSIRE
Trigger: TTCCCTGATGGACCAGTCCAAACCCTGCCCAGTGAA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCCAAAATAGCCAGATaGCTACGTTCTCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESKIAR*LRSPLS
Trigger: GGAAAGAGGAGAACGTAGCAATCTGGCTATTTTGGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCAAGGATACAGGTTGTaGGGGGAGGTAAATAAGTGT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEQGYRL*GEVNKC
Trigger: ACACTTATTTACCTCCCCCAACAACCTGTATCCTTG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp CGTAGCATGCCATTGCTTGGTAACGATATCCTTGTCCGCATTCCTTaGTGTCTCCTTGTACTTTCATTCCCAGCAACACTTCCACTTTTC +
Preference number: 5 (lower is better)
Translates to: RSMPLLGNDILVRIP*CLLVLSFPATLPLF
Trigger: GAAAAGTGGAAGTGTTGCTGGGAATGAAAGTACAAGGAGACATCAAGGAATGCGGACAAGGATATCGTTACCAAGCAATGGCATGCTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 90 bp GTCAGCACAGAATTCCTCATCCACCACTTTGCTGAAATCATCAGCTaGCCCATCACTTACTACACAAGAAATGTTCCTTGTTCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: VSTEFLIHHFAEIIS*PITYYTRNVPCSGP
Trigger: GGGACCAGAACAAGGAACATTTCTTGTGTAGTAAGTGATGGGTCAGCTGATGATTTCAGCAAAGTGGTGGATGAGGAATTCTGTGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 90 bp TCTAGATGTTTCCACAAGCCTGCCATTTTGATCGTAGCATGCCATTaGTTGGTAACGATATCCTTGTCCGCATTCCTTGATGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SRCFHKPAILIVACH*LVTISLSAFLDVSL
Trigger: CAAGGAGACATCAAGGAATGCGGACAAGGATATCGTTACCAAGCAATGGCATGCTACGATCAAAATGGCAGGCTTGTGGAAACATCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp CTGACCTTTGACACCACACTGTTCGGGAAGAGCCCTTCCAAGCACTaGCCATCCATTTATATTCATAGCACTGTCCATCATAACATGATT +
Preference number: 5 (lower is better)
Translates to: LTFDTTLFGKSPSKH*PSIYIHSTVHHNMI
Trigger: AATCATGTTATGATGGACAGTGCTATGAATATAAATGGATGGCCAGTGCTTGGAAGGGCTCTTCCCGAACAGTGTGGTGTCAAAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGATGCAGGCAACCAGTTaGAAAATCAGGGAAAGTAGA +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEMQATS*KIRESR
Trigger: TCTACTTTCCCTGATTTTCAAACTGGTTGCCTGCAT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGTCTTCATGCCACTCTaGGCACAGATGTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPVFMPL*AQMSSS
Trigger: GGATGAAGACATCTGTGCCAAGAGTGGCATGAAGAC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTCAGGATACAAGAACTaGCAAATGTCTTCATGCCAC +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLESGYKN*QMSSCH
Trigger: GTGGCATGAAGACATTTGCAAGTTCTTGTATCCTGA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAGACACGATGCAATCTaGCTGGCAAGGAATGAGGCA +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPRHDAI*LARNEA
Trigger: TGCCTCATTCCTTGCCAGCAAGATTGCATCGTGTCT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGGAACTCCGTCAGGTTaGGACAGCCAGAGCCTCCGA +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNGTPSG*DSQSLR
Trigger: TCGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTCC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCACAACCTCTTGAACTaGCGTGCCTGGACCACACTC +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQHNLLN*RAWTTL
Trigger: GAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTACAGCTTCGTACTTCTaGCAAAGCACTGCTATTTGG +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCTASYF*QSTAIW
Trigger: CCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTGT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGCCCCAGGGACCAGTTaGCCAGTGGTACACTGTGCA +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNAPGTS*PVVHCA
Trigger: TGCACAGTGTACCACTGGCAAACTGGTCCCTGGGGC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGTAGCTTTGGCACGCTaGAGGTGCCTCACAGGCCTT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNVALAR*RCLTGL
Trigger: AAGGCCTGTGAGGCACCTCAAGCGTGCCAAAGCTAC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGTAGCTTTGGCACGCTaGAGGTGCCTCACAGGCCTT +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIVALAR*RCLTGL
Trigger: AAGGCCTGTGAGGCACCTCAAGCGTGCCAAAGCTAC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCTTCCACCTGTAGCTTaGGCACGCTTGAGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNLPPVA*ARLRCL
Trigger: GAGGCACCTCAAGCGTGCCAAAGCTACAGGTGGAAG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGGACCAGCTGGTCAATaGACAGTCATCCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNGPAGQ*TVILAG
Trigger: CCCTGCCAGGATGACTGTCAATTGACCAGCTGGTCC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTGCTTCTCATGTACTATaGAGACCCACGTCAGCTTTA +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCASHVL*RPTSAL
Trigger: TAAAGCTGACGTGGGTCTCAATAGTACATGAGAAGC...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTGGATAACTATTTGCTaGGCTCACACACCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEWITIC*AHTPVS
Trigger: AGAAACTGGTGTGTGAGCCAAGCAAATAGTTATCCA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 90 bp CAGTCGTACAACTCTTTGTGCCAATCGCAAACTTTGAAACAATTCTaGTGGTTATTGGGTCTCTCGGCCTGCTTACAGTTAGTATGCAGT +
Preference number: 5 (lower is better)
Translates to: QSYNSLCQSQTLKQF*WLLGLSACLQLVCS
Trigger: ACTGCATACTAACTGTAAGCAGGCCGAGAGACCCAATAACCAGCAGAATTGTTTCAAAGTTTGCGATTGGCACAAAGAGTTGTACGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000480061.1
ENST00000617773.1
CDS GCA 90 bp GTTACATCTAGATGTTTCCACAAGCCTGCCATTTTGATCGTAGCATaGCATTGCTTGGTAACGATATCCTTGTCCGCATTCCTTGATGTC +
Preference number: 5 (lower is better)
Translates to: VTSRCFHKPAILIVA*HCLVTISLSAFLDV
Trigger: GACATCAAGGAATGCGGACAAGGATATCGTTACCAAGCAATGGCATGCTACGATCAAAATGGCAGGCTTGTGGAAACATCTAGATGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAGCCGAAACTGGTTGTaGCCAGGAAAAGTTATATGT +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCSRNWL*PGKVIC
Trigger: ACATATAACTTTTCCTGGCAACAACCAGTTTCGGCT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTCAGGATACAAGAACTaGCAAATGTCTTCATGCCAC +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCSGYKN*QMSSCH
Trigger: GTGGCATGAAGACATTTGCAAGTTCTTGTATCCTGA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATCCGCAGGAATGTCTTaGTCTTTCTGGATGCACGCT +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKSAGMS*SFWMHA
Trigger: AGCGTGCATCCAGAAAGACAAAGACATTCCTGCGGA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTGCTCCAGGAGAGGCTaGGGCTCAAAGTACTCACAG +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNCSRRG*GSKYSQ
Trigger: CTGTGAGTACTTTGAGCCCAAGCCTCTCCTGGAGCA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCCCGCGTCTCCTTGCTaGTCTTACTTGTCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNPASPC*SYLSGV
Trigger: CACTCCCGACAAGTAAGACAAGCAAGGAGACGCGGG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTCTTCCCGCGTCTCCTaGCTTGTCTTACTTGTCGGG +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSSRVS*LVLLVG
Trigger: CCCGACAAGTAAGACAAGCAAGGAGACGCGGGAAGA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGGGATCCTTTACTCCTTaGCTGCGGTCCTTTTCCCGT +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQGSFTP*LRSFSR
Trigger: ACGGGAAAAGGACCGCAGCAAAGGAGTAAAGGATCC...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGCCAATATTTGTTCTCTaGTCTGTTCTGCCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLEPIFVL*SVLPVS
Trigger: AGAAACAGGCAGAACAGACAAGAGAACAAATATTGG...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTGGATGTCCCAATATTaGTTCTCTTGTCTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCWMSQY*FSCLFC
Trigger: GCAGAACAGACAAGAGAACAAATATTGGGACATCCA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTGTCATGGCATGTTTTaGAGCAGGGGCTCCACTCTG +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQCHGMF*SRGSTL
Trigger: CAGAGTGGAGCCCCTGCTCAAAAACATGCCATGACA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGAGAGGAGGTTTTCGTaGGCCTGCACGCAGTACACC +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNERRFS*ACTQYT
Trigger: GGTGTACTGCGTGCAGGCCAACGAAAACCTCCTCTC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACCCACTTGGCCCACATaGACTCGCACACAGATGACT +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIPTWPT*TRTQMT
Trigger: AGTCATCTGTGTGCGAGTCAATGTGGGCCAAGTGGG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCCACTTGGCCCACATaGACTCGCACACAGATGACT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPTWPT*TRTQMT
Trigger: AGTCATCTGTGTGCGAGTCAATGTGGGCCAAGTGGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTTCACAAAGGTCACCTaGCAGATGCTCCAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQFTKVT*QMLQGS
Trigger: AGAGCCCTGGAGCATCTGCAAGGTGACCTTTGTGAA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTCAGGGCATGGTAATTaGCACACTCTAGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQSGHGN*HTLEPR
Trigger: CCTGGGCTCTAGAGTGTGCAAATTACCATGCCCTGA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTTCACTGGGCAGGGTTaGGACTGGTCCATCAGGGAA +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNFTGQG*DWSIRE
Trigger: TTCCCTGATGGACCAGTCCAAACCCTGCCCAGTGAA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGGCCAAGGATACAGGTaGTTGGGGGAGGTAAATAAG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKGQGYR*LGEVNK
Trigger: CTTATTTACCTCCCCCAACAACCTGTATCCTTGGCC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGAGATTCCTCACAGATTaGCTCAAGGACTACTGTTTT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLERFLTD*LKDYCF
Trigger: AAAACAGTAGTCCTTGAGCAAATCTGTGAGGAATCT...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp ATTTGTTGTGGCCTCTGGACATCTATGAAGTCAGAAAGCCGAAACTaGTTGTTGCCAGGAAAAGTTATATGTTACATGTCGGCATCTCCA +
Preference number: 5 (lower is better)
Translates to: ICCGLWTSMKSESRN*LLPGKVICYMSASP
Trigger: TGGAGATGCCGACATGTAACATATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTCTGACTTCATAGATGTCCAGAGGCCACAACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CCA 90 bp TCGTACAACTCTTTGTGCCAATCGCAAACTTTGAAACAATTCTGCTaGTTATTGGGTCTCTCGGCCTGCTTACAGTTAGTATGCAGTGTA +
Preference number: 5 (lower is better)
Translates to: SYNSLCQSQTLKQFC*LLGLSACLQLVCSV
Trigger: TACACTGCATACTAACTGTAAGCAGGCCGAGAGACCCAATAACCAGCAGAATTGTTTCAAAGTTTGCGATTGGCACAAAGAGTTGTACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000480061.1
ENST00000617773.1
CDS CCA 90 bp CAAGCTGACCAAGGTGAAACTTCACATTCAGTTGGACAAGGAATGTaGCACAGCTGTGTAGTATTAGGGATAGGTCCAGTGCATAATTTT +
Preference number: 5 (lower is better)
Translates to: QADQGETSHSVGQGM*HSCVVLGIGPVHNF
Trigger: AAAATTATGCACTGGACCTATCCCTAATACTACACAGCTGTGCCACATTCCTTGTCCAACTGAATGTGAAGTTTCACCTTGGTCAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAACAGTACGAGTGGGGTaGACTACACGGTGGGTTACA +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFITVRVG*TTRWVT
Trigger: TGTAACCCACCGTGTAGTCAACCCCACTCGTACTGT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAAAGGTTTCAGTCGGTaGTTTTGCCTTCTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPKGFSR*FCLLWG
Trigger: ACCCCAAAGAAGGCAAAACAACCGACTGAAACCTTT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTAATTTTTCTCCGCTCTaGGAACGTCTTTTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCNFSPL*ERLFKE
Trigger: CTCTTTGAAAAGACGTTCCAAGAGCGGAGAAAAATT...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCAATTCTGCTGGTTATaGGGTCTCTCGGCCTGCTTA +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQQFCWL*GLSACL
Trigger: TAAGCAGGCCGAGAGACCCAATAACCAGCAGAATTG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTGCCAATCGCAAACTTaGAAACAATTCTGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCCQSQT*KQFCWL
Trigger: TAACCAGCAGAATTGTTTCAAAGTTTGCGATTGGCA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGAGACACGATGCAATCTaGCTGGCAAGGAATGAGGCA +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQRHDAI*LARNEA
Trigger: TGCCTCATTCCTTGCCAGCAAGATTGCATCGTGTCT...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCTTCCCGCGTCTCCTaGCTTGTCTTACTTGTCGGG +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSSRVS*LVLLVG
Trigger: CCCGACAAGTAAGACAAGCAAGGAGACGCGGGAAGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTTTAAGTCCATTGGCTTaGAGGCTTCTTTGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCLSPLA*RLLCSC
Trigger: ACAAGAACAAAGAAGCCTCAAAGCCAATGGACTTAA...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCTTTCAGGACATTTTTaGGGTCCCACTTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLSGHF*GPTWPT
Trigger: TGTGGGCCAAGTGGGACCCAAAAAATGTCCTGAAAG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCCAGTTCCCCACAGGTaGTGCATTATATTTGTCACA +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPPVPHR*CIIFVT
Trigger: TGTGACAAATATAATGCACAACCTGTGGGGAACTGG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGATCGTAGCATGCCATaGCTTGGTAACGATATCCTT +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPDRSMP*LGNDIL
Trigger: AAGGATATCGTTACCAAGCAATGGCATGCTACGATC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTTGACATGGTCCAGTTaGGGGCAAGGCCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNLTWSS*GQGLPP
Trigger: TGGAGGAAGGCCTTGCCCCAAACTGGACCATGTCAA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTCTCACTTTTCGGGTTaGCACGCCCTCTCCACAGTT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSHFSG*HALSTV
Trigger: AACTGTGGAGAGGGCGTGCAAACCCGAAAAGTGAGA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AAGTACAGTCCTCCCTCACTGTCTTGTGGTGTGGAATGTGAACAAAGACTCGAGTGCCTGAAAATGGTATaGCTTTTTAATGGCACCTTT +
Preference number: 5 (lower is better)
Translates to: KYSPPSLSCGVECEQRLECLKMV*LFNGTF
Trigger: AAAGGTGCCATTAAAAAGCAATACCATTTTCAGGCA...CTCGAGTCTTTGTTCACATTCCACACCACAAGACAGTGAGGGAGGACTGTACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGCTTCTCATGTACTATaGAGACCCACGTCAGCTTTA +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPASHVL*RPTSAL
Trigger: TAAAGCTGACGTGGGTCTCAATAGTACATGAGAAGC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGGGGATAAGTGTGCATaGCTCAAGGGTGCTGTTAGA +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIGDKCA*LKGAVR
Trigger: TCTAACAGCACCCTTGAGCAATGCACACTTATCCCC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGTCTTCATGCCACTCTaGGCACAGATGTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIVFMPL*AQMSSS
Trigger: GGATGAAGACATCTGTGCCAAGAGTGGCATGAAGAC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAAGCTCTTTCCTGCTATaGTTCGCTTCAGATGAGAAG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKSSFLL*FASDEK
Trigger: CTTCTCATCTGAAGCGAACAATAGCAGGAAAGAGCT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACAGTCGTACAACTCTTaGTGCCAATCGCAAACTTTG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKQSYNS*CQSQTL
Trigger: CAAAGTTTGCGATTGGCACAAAGAGTTGTACGACTG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGAAACCTGGCACTCTTaGGTGATCACACAGGACTGG +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNETWHS*VITQDW
Trigger: CCAGTCCTGTGTGATCACCAAAGAGTGCCAGGTTTC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCGGCTTTGAGGCTTCTTaGTTCTTGTGGGTACTTAAT +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPGFEAS*FLWVLN
Trigger: ATTAAGTACCCACAAGAACAAAGAAGCCTCAAAGCC...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAAACTTCACATTCAGTaGGACAAGGAATGTGGCACA +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPKLHIQ*DKECGT
Trigger: TGTGCCACATTCCTTGTCCAACTGAATGTGAAGTTT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAACAGCTTCGTACTTCTaGCAAAGCACTGCTATTTGG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKTASYF*QSTAIW
Trigger: CCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTGT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCAAGTCGTAGTTGTGTaGAAGGACGATACTGAGGTG +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQQVVVV*KDDTEV
Trigger: CACCTCAGTATCGTCCTTCAACACAACTACGACTTG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAGCCTGTCCTCCATCTaGCTTGCGACAAGTAATGGC +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSLSSI*LATSNG
Trigger: GCCATTACTTGTCGCAAGCAAGATGGAGGACAGGCT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAACCAGTTCCCCACAGGTaGTGCATTATATTTGTCACA +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKPVPHR*CIIFVT
Trigger: TGTGACAAATATAATGCACAACCTGTGGGGAACTGG...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCACAAGCCTGCCATTTaGATCGTAGCATGCCATTGC +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNHKPAI*IVACHC
Trigger: GCAATGGCATGCTACGATCAAAATGGCAGGCTTGTG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTGGTCTTCCATCACCTaGAAAGGGCTGGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNWSSIT*KGLGHC
Trigger: ACAGTGACCCAGCCCTTTCAAGGTGATGGAAGACCA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTCCTCATCCACCACTTaGCTGAAATCATCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQSSSTT*LKSSAD
Trigger: GTCAGCTGATGATTTCAGCAAAGTGGTGGATGAGGA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAGCAGAATGGCAAAGTaGAGAAGTTGCAACATAGAC +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPSRMAK*RSCNID
Trigger: GTCTATGTTGCAACTTCTCAACTTTGCCATTCTGCT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATCCAAAATAGCCAGATaGCTACGTTCTCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKSKIAR*LRSPLS
Trigger: GGAAAGAGGAGAACGTAGCAATCTGGCTATTTTGGA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GTTGTCAATTTCACAATGGCTGCAGTGATGAGGAAGTGTGTGTACAGCAGGTGTCAGATCATTTGGGAATaGTGCTTCTCATGTACTATT +
Preference number: 5 (lower is better)
Translates to: VVNFTMAAVMRKCVYSRCQIIWE*CFSCTI
Trigger: AATAGTACATGAGAAGCACAATTCCCAAATGATCTG...ACACCTGCTGTACACACACTTCCTCATCACTGCAGCCATTGTGAAATTGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGAGATCCCAGATCATTaGGGAATTGTGCTTCTCATG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKEIPDH*GIVLLM
Trigger: CATGAGAAGCACAATTCCCAAATGATCTGGGATCTC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAGAAAGCCGAAACTGGTaGTTGCCAGGAAAAGTTATA +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKESRNW*LPGKVI
Trigger: TATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTC...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAATTTTTCTCCGCTCTaGGAACGTCTTTTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPNFSPL*ERLFKE
Trigger: CTCTTTGAAAAGACGTTCCAAGAGCGGAGAAAAATT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCCGCAGGAATGTCTTaGTCTTTCTGGATGCACGCT +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSAGMS*SFWMHA
Trigger: AGCGTGCATCCAGAAAGACAAAGACATTCCTGCGGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAATGGATGTCCCAATATTaGTTCTCTTGTCTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKWMSQY*FSCLFC
Trigger: GCAGAACAGACAAGAGAACAAATATTGGGACATCCA...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTGTCCTCCATCTTGCTaGCGACAAGTAATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNCPPSC*RQVMAL
Trigger: AAGAGCCATTACTTGTCGCAAGCAAGATGGAGGACA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACCTTGTCCGCATTCCTaGATGTCTCCTTGTACTTTC +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIPCPHS*MSPCTF
Trigger: GAAAGTACAAGGAGACATCAAGGAATGCGGACAAGG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGTTGGTAACGATATCCTaGTCCGCATTCCTTGATGTC +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQLVTIS*SAFLDV
Trigger: GACATCAAGGAATGCGGACAAGGATATCGTTACCAA...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTCCTCATCCACCACTTaGCTGAAATCATCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNSSSTT*LKSSAD
Trigger: GTCAGCTGATGATTTCAGCAAAGTGGTGGATGAGGA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCAGATTCCTCACAGATTaGCTCAAGGACTACTGTTTT +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPRFLTD*LKDYCF
Trigger: AAAACAGTAGTCCTTGAGCAAATCTGTGAGGAATCT...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTTCACATCTCCTCTTTaGTCCTCCATGGTGGGTAAT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNFTSPL*SSMVGN
Trigger: ATTACCCACCATGGAGGACAAAAGAGGAGATGTGAA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACAGTCGTACAACTCTTaGTGCCAATCGCAAACTTTG +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIQSYNS*CQSQTL
Trigger: CAAAGTTTGCGATTGGCACAAAGAGTTGTACGACTG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGCAGCTTTCCCCGTCTaGTTAATGCACATAACCTCT +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNAAFPV*LMHITS
Trigger: AGAGGTTATGTGCATTAACAAGACGGGGAAAGCTGC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGACAACTCCATCTCCTaGAGACAAACAGGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNDNSIS*RQTGFF
Trigger: AAAGAACCCTGTTTGTCTCAAGGAGATGGAGTTGTC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGACAACTCCATCTCCTaGAGACAAACAGGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIDNSIS*RQTGFF
Trigger: AAAGAACCCTGTTTGTCTCAAGGAGATGGAGTTGTC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTGTCCTCCATCTTGCTaGCGACAAGTAATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNCPPSC*RQVMAL
Trigger: AAGAGCCATTACTTGTCGCAAGCAAGATGGAGGACA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACCCTTGTCCGCATTCCTaGATGTCTCCTTGTACTTTC +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNPCPHS*MSPCTF
Trigger: GAAAGTACAAGGAGACATCAAGGAATGCGGACAAGG...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATGATCGTAGCATGCCATaGCTTGGTAACGATATCCTT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNDRSMP*LGNDIL
Trigger: AAGGATATCGTTACCAAGCAATGGCATGCTACGATC...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTTCAGGTCAACTGACTaGCCATCACTTCGAACACAA +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNFRSTD*PSLRTQ
Trigger: TTGTGTTCGAAGTGATGGCAAGTCAGTTGACCTGAA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCAAGGATACAGGTTGTaGGGGGAGGTAAATAAGTGT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNQGYRL*GEVNKC
Trigger: ACACTTATTTACCTCCCCCAACAACCTGTATCCTTG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AACCAAACAACAGACCTTCATTCTAGGGAACAGCAGTTCTACATCTTTTACCCCCAGATCATTTGGGAATaGTGCTTCTCATGTACTATT +
Preference number: 5 (lower is better)
Translates to: NQTTDLHSREQQFYIFYPQIIWE*CFSCTI
Trigger: AATAGTACATGAGAAGCACAATTCCCAAATGATCTG...GGGGTAAAAGATGTAGAACTGCTGTTCCCTAGAATGAAGGTCTGTTGTTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTTTCAGTCGGTTGTTTaGCCTTCTTTGGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNFQSVV*PSLGFL
Trigger: AAGAAACCCCAAAGAAGGCAAAACAACCGACTGAAA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAATAGCTGATTTCATCTaGCTGCCATCCAAACTGAAC +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIIADFI*LPSKLN
Trigger: GTTCAGTTTGGATGGCAGCAAGATGAAATCAGCTAT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAGGCTTTGAGGCTTCTTaGTTCTTGTGGGTACTTAAT +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIGFEAS*FLWVLN
Trigger: ATTAAGTACCCACAAGAACAAAGAAGCCTCAAAGCC...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAAAACTTCACATTCAGTaGGACAAGGAATGTGGCACA +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIKLHIQ*DKECGT
Trigger: TGTGCCACATTCCTTGTCCAACTGAATGTGAAGTTT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGGCAAAGTTGAGAAGTaGCAACATAGACCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNGKVEK*QHRPCG
Trigger: TCCACAAGGTCTATGTTGCAACTTCTCAACTTTGCC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp CGCCTATCGTGCTGCACTAATATAGTGCAAAAATGTGCCTTCCATATAGCAAAAATAATAACCTTCCCTTaGTCCAAAATAGCCAGATTG +
Preference number: 5 (lower is better)
Translates to: RLSCCTNIVQKCAFHIAKIITFP*SKIARL
Trigger: CAATCTGGCTATTTTGGACAAAGGGAAGGTTATTAT...TTTTGCTATATGGAAGGCACATTTTTGCACTATATTAGTGCAGCACGATAGGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTGGATAACTATTTGCTaGGCTCACACACCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNWITIC*AHTPVS
Trigger: AGAAACTGGTGTGTGAGCCAAGCAAATAGTTATCCA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTTCTTTGGGGTTTCTTaGGCTTTTTGCAAGCTAGAT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNFFGVS*AFCKLD
Trigger: ATCTAGCTTGCAAAAAGCCAAAGAAACCCCAAAGAA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTTTCAGTCGGTTGTTTaGCCTTCTTTGGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNFQSVV*PSLGFL
Trigger: AAGAAACCCCAAAGAAGGCAAAACAACCGACTGAAA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAGCCGAAACTGGTTGTaGCCAGGAAAAGTTATATGT +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSRNWL*PGKVIC
Trigger: ACATATAACTTTTCCTGGCAACAACCAGTTTCGGCT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACGAAAGCCGAAACTGGTaGTTGCCAGGAAAAGTTATA +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNESRNW*LPGKVI
Trigger: TATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTC...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTCCAGCATTCTTACTTaGGAGAGAGACAAGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNSSILT*ERDKKS
Trigger: AGACTTCTTGTCTCTCTCCAAAGTAAGAATGCTGGA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATTGCCAATCGCAAACTTaGAAACAATTCTGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNCQSQT*KQFCWL
Trigger: TAACCAGCAGAATTGTTTCAAAGTTTGCGATTGGCA...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGAGATCAGTTAGTCCTATTCTACGTGGTTTCTAGTGAAATAGTCCAGCAAAATCCAATATTTGTTCTCTaGTCTGTTCTGCCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: RDQLVLFYVVSSEIVQQNPIFVL*SVLPVS
Trigger: AGAAACAGGCAGAACAGACAAGAGAACAAATATTGG...ATTTTGCTGGACTATTTCACTAGAAACCACGTAGAATAGGACTAACTGATCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATTAAGTCCATTGGCTTaGAGGCTTCTTTGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFILSPLA*RLLCSC
Trigger: ACAAGAACAAAGAAGCCTCAAAGCCAATGGACTTAA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp TTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACTCCAGCCTTTATTCATTTCTTaGACCAGTGGATTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: FCNLCKYSNEQQGEFILQPLFIS*TSGFGV
Trigger: TACACCAAATCCACTGGTCAAAGAAATGAATAAAGG...CTGGAGTATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACTTCTTTGGGGTTTCTTaGGCTTTTTGCAAGCTAGAT +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNFFGVS*AFCKLD
Trigger: ATCTAGCTTGCAAAAAGCCAAAGAAACCCCAAAGAA...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATATGCCTGAAAATGGTATaGCTTTTTAATGGCACCTTT +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFICLKMV*LFNGTF
Trigger: AAAGGTGCCATTAAAAAGCAATACCATTTTCAGGCA...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATAATAATAACCTTCCCTTaGTCCAAAATAGCCAGATTG +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIIITFP*SKIARL
Trigger: CAATCTGGCTATTTTGGACAAAGGGAAGGTTATTAT...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp GATGTCTTTTGTAATCTTTGCAAATACTCTAATGAACAGCAGGGGGAGTTCATACCTTTATTCATTTCTTaGACCAGTGGATTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: DVFCNLCKYSNEQQGEFIPLFIS*TSGFGV
Trigger: TACACCAAATCCACTGGTCAAAGAAATGAATAAAGG...TATGAACTCCCCCTGCTGTTCATTAGAGTATTTGCAAAGATTACAAAAGACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS-3UTR CAA 90 bp AGTGTCAATAGAGAAGTTACTACTATATTCCCCTCCCAAATTTTTAGAAGGAACAGATTGCTTCAAATTTaGCCAGTGAGAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: SVNREVTTIFPSQIFRRNRLLQI*PVRKAK
Trigger: TTTTGCCTTTCTCACTGGCAAAATTTGAAGCAATCT...GTTCCTTCTAAAAATTTGGGAGGGGAATATAGTAGTAACTTCTCTATTGACACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp CAGCCAGAGCCTCCGAACTGCGGGGGCGCCACCACATaGCGCGTCCGGTGCTGGAGCCCGCTGCCGCAGGTC +
Preference number: 6 (lower is better)
Translates to: QPEPPNCGGATT*RVRCWSPLPQV
Trigger: GACCTGCGGCAGCGGGCTCCAGCACCGGACGCGTCATGTGGTGGCGCCCCCGCAGTTCGGAGGCTCTGGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp GCGCCACCACATGACGCGTCCGGTGCTGGAGCCCGCTaGCGCAGGTCTTGGAGCATTCGGACCAGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: APPHDASGAGAR*RRSWSIRTRQK
Trigger: TTTCTGCCTGGTCCGAATGCTCCAAGACCTGCGGCAGCGGGCTCCAGCACCGGACGCGTCATGTGGTGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp CGGCCTCGCATGGACTGGATTGGCACACCTGGAACTCCGTCAGGTTaGGACAGCCAGAGCCTCCGAACTGCGGGGGCGCCACCACATGAC +
Preference number: 6 (lower is better)
Translates to: RPRMDWIGTPGTPSG*DSQSLRTAGAPPHD
Trigger: GTCATGTGGTGGCGCCCCCGCAGTTCGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp GGGCCGTCTGGTTGCCGCGCCTCTTGTCCTGCTGACTaGGCAAAGGGTCCACACGGCACTCAGTCCACTCTG +
Preference number: 6 (lower is better)
Translates to: GPSGCRASCPAD*AKGPHGTQSTL
Trigger: CAGAGTGGACTGAGTGCCGTGTGGACCCTTTGCTCAGTCAGCAGGACAAGAGGCGCGGCAACCAGACGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp CAGAGGGCCGTCTGGTTGCCGCGCCTCTTGTCCTGCTaGCTGAGCAAAGGGTCCACACGGCACTCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: QRAVWLPRLLSC*LSKGSTRHSVH
Trigger: GTGGACTGAGTGCCGTGTGGACCCTTTGCTCAGTCAGCAGGACAAGAGGCGCGGCAACCAGACGGCCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp AGCTCCTCGGCCTCGCATGGACTGGATTGGCACACCTaGAACTCCGTCAGGTTTGGACAGCCAGAGCCTCCG +
Preference number: 6 (lower is better)
Translates to: SSSASHGLDWHT*NSVRFGQPEPP
Trigger: CGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp ATGGACTGGATTGGCACACCTGGAACTCCGTCAGGTTaGGACAGCCAGAGCCTCCGAACTGCGGGGGCGCCA +
Preference number: 6 (lower is better)
Translates to: MDWIGTPGTPSG*DSQSLRTAGAP
Trigger: TGGCGCCCCCGCAGTTCGGAGGCTCTGGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp CACATGCAGGCTGTACCTGAGCTCCTCGGCCTCGCATGGACTGGATaGGCACACCTGGAACTCCGTCAGGTTTGGACAGCCAGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: HMQAVPELLGLAWTG*AHLELRQVWTARAS
Trigger: GGAGGCTCTGGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAGCTCAGGTACAGCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp GCTGTACCTGAGCTCCTCGGCCTCGCATGGACTGGATaGGCACACCTGGAACTCCGTCAGGTTTGGACAGCC +
Preference number: 6 (lower is better)
Translates to: AVPELLGLAWTG*AHLELRQVWTA
Trigger: GGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAGCTCAGGTACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp ACACCACTCCCACAGGACTTGCTGCAGCGCGACCAGTaGGACCACTCACTGAGCTTGCAGTCTGAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: TPLPQDLLQRDQ*DHSLSLQSEGQ
Trigger: CTGCCCCTCAGACTGCAAGCTCAGTGAGTGGTCCAACTGGTCGCGCTGCAGCAAGTCCTGTGGGAGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp CGAACCTTCACACCACTCCCACAGGACTTGCTGCAGCGCGACCAGTaGGACCACTCACTGAGCTTGCAGTCTGAGGGGCAGGGGATGATG +
Preference number: 6 (lower is better)
Translates to: RTFTPLPQDLLQRDQ*DHSLSLQSEGQGMM
Trigger: CATCATCCCCTGCCCCTCAGACTGCAAGCTCAGTGAGTGGTCCAACTGGTCGCGCTGCAGCAAGTCCTGTGGGAGTGGTGTGAAGGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp GGCCCACAGCCTTCCTGTGCTCCAGGGCTGTCTTGTTaGACGCTCCAAGGGACTAATTGGCATCTGCGCCAT +
Preference number: 6 (lower is better)
Translates to: GPQPSCAPGLSC*TLQGTNWHLRH
Trigger: ATGGCGCAGATGCCAATTAGTCCCTTGGAGCGTGCAACAAGACAGCCCTGGAGCACAGGAAGGCTGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp CTGTACCTGAGCTCCTCGGCCTCGCATGGACTGGATTaGCACACCTGGAACTCCGTCAGGTTTGGACAGCCA +
Preference number: 6 (lower is better)
Translates to: LYLSSSASHGLD*HTWNSVRFGQP
Trigger: TGGCTGTCCAAACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAGCTCAGGTACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp CACATGCAGGCTGTACCTGAGCTCCTCGGCCTCGCATaGACTGGATTGGCACACCTGGAACTCCGTCAGGTT +
Preference number: 6 (lower is better)
Translates to: HMQAVPELLGLA*TGLAHLELRQV
Trigger: AACCTGACGGAGTTCCAGGTGTGCCAATCCAGTCCATGCGAGGCCGAGGAGCTCAGGTACAGCCTGCATGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp CGTAGACCATGTGCTGAGCACACAGTCTTTCGGGCATaGGGCATCACAGGCCACAGGGATGGGGAAGATGGC +
Preference number: 6 (lower is better)
Translates to: RRPCAEHTVFRA*GITGHRDGEDG
Trigger: GCCATCTTCCCCATCCCTGTGGCCTGTGATGCCCCATGCCCGAAAGACTGTGTGCTCAGCACATGGTCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp TCCACACTGGGCCTCCTGCACTTGGCATGGAGACCACTGGCCATATaGCCACCGATAACAAGGCTTCACTGGGCAGGGTTTGGACTGGTC +
Preference number: 6 (lower is better)
Translates to: STLGLLHLAWRPLAI*PPITRLHWAGFGLV
Trigger: GACCAGTCCAAACCCTGCCCAGTGAAGCCTTGTTATCGGTGGCAATATGGCCAGTGGTCTCCATGCCAAGTGCAGGAGGCCCAGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp CAGGCAGGCTCTTCACAGGGAATGGCTTCCAGTAAGTaGGGGCAGTTTCCGGTTACCCCAGAGCCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: QAGSSQGMASSK*GQFPVTPEPPV
Trigger: CACTGGAGGCTCTGGGGTAACCGGAAACTGCCCTCACTTACTGGAAGCCATTCCCTGTGAAGAGCCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS TCA 72 bp GGATCTGTGCAGTCTCGGCCCCCGTTGGCTGGCAGCTaGATGATGACCCGATGCCTAGACTGCTTCCTGATA +
Preference number: 6 (lower is better)
Translates to: GSVQSRPPLAGS*MMTRCLDCFLI
Trigger: TATCAGGAAGCAGTCTAGGCATCGGGTCATCATTCAGCTGCCAGCCAACGGGGGCCGAGACTGCACAGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp CTACACGGTGGGTTACAAGACCTGTCGGCATCAGGCTaGCTCATCACCAAGCAGCCCCCTGCGGAACAGAAA +
Preference number: 6 (lower is better)
Translates to: LHGGLQDLSASG*LITKQPPAEQK
Trigger: TTTCTGTTCCGCAGGGGGCTGCTTGGTGATGAGCCAGCCTGATGCCGACAGGTCTTGTAACCCACCGTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408005.2
CDS CCA 72 bp ATAGAGGGGATCTGTGCAGTCTCGGCCCCCGTTGGCTaGCAGCTGAATGATGACCCGATGCCTAGACTGCTT +
Preference number: 6 (lower is better)
Translates to: IEGICAVSAPVG*QLNDDPMPRLL
Trigger: AAGCAGTCTAGGCATCGGGTCATCATTCAGCTGCCAGCCAACGGGGGCCGAGACTGCACAGATCCCCTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CCAGGTCCTTCCCCGTCCTGCTGGGTTACTGGAGGGTaGGGTTGGATGTACAGCCCGACTGGTTTTCACATC +
Preference number: 6 (lower is better)
Translates to: PGPSPSCWVTGG*GWMYSPTGFHI
Trigger: GATGTGAAAACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGTAACCCAGCAGGACGGGGAAGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp ATGCCGACAGAGCAGGAGGCCTCCCCATTCCAAGTCGTAGTTGTGTaGAAGGACGATACTGAGGTGTCCTCAATGCACTGGCCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: MPTEQEASPFQVVVV*KDDTEVSSMHWPQG
Trigger: TCCCTGGGGCCAGTGCATTGAGGACACCTCAGTATCGTCCTTCAACACAACTACGACTTGGAATGGGGAGGCCTCCTGCTCTGTCGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp GTCACCTTGCAGATGCTCCAGGGCTCTGTGACCCATAGGTACTGGTaGCAGTCACTGTGGCATGGGACAACCTCATACACCTGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: VTLQMLQGSVTHRYW*QSLWHGTTSYTCAW
Trigger: CCAGGCACAGGTGTATGAGGTTGTCCCATGCCACAGTGACTGCAACCAGTACCTATGGGTCACAGAGCCCTGGAGCATCTGCAAGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423059.9
CDS CCA 72 bp CCTTCCCCGTCCTGCTGGGTTACTGGAGGGTTGGGTTaGATGTACAGCCCGACTGGTTTTCACATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: PSPSCWVTGGLG*MYSPTGFHISS
Trigger: AGAGGAGATGTGAAAACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGTAACCCAGCAGGACGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp CAGGTCCTTCCCCGTCCTGCTGGGTTACTGGAGGGTTaGGTTGGATGTACAGCCCGACTGGTTTTCACATCT +
Preference number: 6 (lower is better)
Translates to: QVLPRPAGLLEG*VGCTARLVFTS
Trigger: AGATGTGAAAACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGTAACCCAGCAGGACGGGGAAGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp GTAGAAACCAGGTCCTTCCCCGTCCTGCTGGGTTACTaGAGGGTTGGGTTGGATGTACAGCCCGACTGGTTT +
Preference number: 6 (lower is better)
Translates to: VETRSFPVLLGY*RVGLDVQPDWF
Trigger: AAACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGTAACCCAGCAGGACGGGGAAGGACCTGGTTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp AGGGCTGGCACAGGGCCTGCATACTGTAGGCACTCATaGATTCCAGCCTGTCCTCCATCTTGCTTGCGACAA +
Preference number: 6 (lower is better)
Translates to: RAGTGPAYCRHS*IPACPPSCLRQ
Trigger: TTGTCGCAAGCAAGATGGAGGACAGGCTGGAATCCATGAGTGCCTACAGTATGCAGGCCCTGTGCCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS CCA 72 bp TGGGCAGGGTTTGGACTGGTCCATCAGGGAAGGGCATaGTCTTCCATCACCTTGAAAGGGCTGGGTCACTGT +
Preference number: 6 (lower is better)
Translates to: WAGFGLVHQGRA*SSITLKGLGHC
Trigger: ACAGTGACCCAGCCCTTTCAAGGTGATGGAAGACCATGCCCTTCCCTGATGGACCAGTCCAAACCCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp CCACTGGCCATATTGCCACCGATAACAAGGCTTCACTaGGCAGGGTTTGGACTGGTCCATCAGGGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: PLAILPPITRLH*AGFGLVHQGRA
Trigger: TGCCCTTCCCTGATGGACCAGTCCAAACCCTGCCCAGTGAAGCCTTGTTATCGGTGGCAATATGGCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp TCCTTCCCCGTCCTGCTGGGTTACTGGAGGGTTGGGTaGGATGTACAGCCCGACTGGTTTTCACATCTCCTC +
Preference number: 6 (lower is better)
Translates to: SFPVLLGYWRVG*DVQPDWFSHLL
Trigger: GAGGAGATGTGAAAACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGTAACCCAGCAGGACGGGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp AGGCACTCATGGATTCCAGCCTGTCCTCCATCTTGCTaGCGACAAGTAATGGCTCTTGCCTGTCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: RHSWIPACPPSC*RQVMALACRPG
Trigger: GCCTGGGCGACAGGCAAGAGCCATTACTTGTCGCAAGCAAGATGGAGGACAGGCTGGAATCCATGAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp GGCCTCCTGCACTTGGCATGGAGACCACTGGCCATATaGCCACCGATAACAAGGCTTCACTGGGCAGGGTTT +
Preference number: 6 (lower is better)
Translates to: GLLHLAWRPLAI*PPITRLHWAGF
Trigger: AAACCCTGCCCAGTGAAGCCTTGTTATCGGTGGCAATATGGCCAGTGGTCTCCATGCCAAGTGCAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp TCACGCAGCCATTTAGAACGAACCTTCACACCACTCCCACAGGACTaGCTGCAGCGCGACCAGTTGGACCACTCACTGAGCTTGCAGTCT +
Preference number: 6 (lower is better)
Translates to: SRSHLERTFTPLPQD*LQRDQLDHSLSLQS
Trigger: AGACTGCAAGCTCAGTGAGTGGTCCAACTGGTCGCGCTGCAGCAAGTCCTGTGGGAGTGGTGTGAAGGTTCGTTCTAAATGGCTGCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp CTGGACACTCCTTTTCACTGCCAATGGGAAACTGCCTaGTGGTTCGTGTCCTTACACGAGTGCCTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LDTPFHCQWETA*WFVSLHECLQG
Trigger: CCCCTGCAGGCACTCGTGTAAGGACACGAACCATCAGGCAGTTTCCCATTGGCAGTGAAAAGGAGTGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp GAGGTGTCCTCAATGCACTGGCCCCAGGGACCAGTTTaGCAGTGGTACACTGTGCAAGGATGCTCATTACAG +
Preference number: 6 (lower is better)
Translates to: EVSSMHWPQGPV*QWYTVQGCSLQ
Trigger: CTGTAATGAGCATCCTTGCACAGTGTACCACTGGCAAACTGGTCCCTGGGGCCAGTGCATTGAGGACACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp TGTCTCGCTACAGTACGAGTGGGGTTGACTACACGGTaGGTTACAAGACCTGTCGGCATCAGGCTGGCTCAT +
Preference number: 6 (lower is better)
Translates to: CLATVRVGLTTR*VTRPVGIRLAH
Trigger: ATGAGCCAGCCTGATGCCGACAGGTCTTGTAACCCACCGTGTAGTCAACCCCACTCGTACTGTAGCGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp GGCTCTGTGACCCATAGGTACTGGTTGCAGTCACTGTaGCATGGGACAACCTCATACACCTGTGCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: GSVTHRYWLQSL*HGTTSYTCAWL
Trigger: CAACCAGGCACAGGTGTATGAGGTTGTCCCATGCCACAGTGACTGCAACCAGTACCTATGGGTCACAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423059.9
CDS CAA 72 bp GGGCTCCACTCTGACCACTCGGAAACCTGGCACTCTTaGGTGATCACACAGGACTGGAAGGTCATTGGAAGC +
Preference number: 6 (lower is better)
Translates to: GLHSDHSETWHS*VITQDWKVIGS
Trigger: GCTTCCAATGACCTTCCAGTCCTGTGTGATCACCAAAGAGTGCCAGGTTTCCGAGTGGTCAGAGTGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CATTTAGAACGAACCTTCACACCACTCCCACAGGACTaGCTGCAGCGCGACCAGTTGGACCACTCACTGAGC +
Preference number: 6 (lower is better)
Translates to: HLERTFTPLPQD*LQRDQLDHSLS
Trigger: GCTCAGTGAGTGGTCCAACTGGTCGCGCTGCAGCAAGTCCTGTGGGAGTGGTGTGAAGGTTCGTTCTAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CAGATGCTCCAGGGCTCTGTGACCCATAGGTACTGGTaGCAGTCACTGTGGCATGGGACAACCTCATACACC +
Preference number: 6 (lower is better)
Translates to: QMLQGSVTHRYW*QSLWHGTTSYT
Trigger: GGTGTATGAGGTTGTCCCATGCCACAGTGACTGCAACCAGTACCTATGGGTCACAGAGCCCTGGAGCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp CCCATTCCAAGTCGTAGTTGTGTTGAAGGACGATACTaGGGTGTCCTCAATGCACTGGCCCCAGGGACCAGT +
Preference number: 6 (lower is better)
Translates to: PIPSRSCVEGRY*GVLNALAPGTS
Trigger: ACTGGTCCCTGGGGCCAGTGCATTGAGGACACCTCAGTATCGTCCTTCAACACAACTACGACTTGGAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp CCATTGCATGAAGAAAACTTGGACCAGCTGGTCAATTaGCAGTCATCCTGGCAGGGGATCTGGCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PLHEENLDQLVN*QSSWQGIWQAW
Trigger: CCAGGCCTGCCAGATCCCCTGCCAGGATGACTGTCAATTGACCAGCTGGTCCAAGTTTTCTTCATGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS TCA 72 bp TCACAAAGGTCACCTTGCAGATGCTCCAGGGCTCTGTaGCCCATAGGTACTGGTTGCAGTCACTGTGGCATG +
Preference number: 6 (lower is better)
Translates to: SQRSPCRCSRAL*PIGTGCSHCGM
Trigger: CATGCCACAGTGACTGCAACCAGTACCTATGGGTCACAGAGCCCTGGAGCATCTGCAAGGTGACCTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp CCCACATTGACTCGCACACAGATGACTTTTCTTGTCTaGATGCCGACAGAGCAGGAGGCCTCCCCATTCCAA +
Preference number: 6 (lower is better)
Translates to: PTLTRTQMTFLV*MPTEQEASPFQ
Trigger: TTGGAATGGGGAGGCCTCCTGCTCTGTCGGCATGCAGACAAGAAAAGTCATCTGTGTGCGAGTCAATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp GTGAGTCTTCCACCTGTAGCTTTGGCACGCTTGAGGTaGCTCACAGGCCTTCTCTTCATAGAGGGGATCTGT +
Preference number: 6 (lower is better)
Translates to: VSLPPVALARLR*LTGLLFIEGIC
Trigger: ACAGATCCCCTCTATGAAGAGAAGGCCTGTGAGGCACCTCAAGCGTGCCAAAGCTACAGGTGGAAGACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp TGTAGGCACTCATGGATTCCAGCCTGTCCTCCATCTTaGTTGCGACAAGTAATGGCTCTTGCCTGTCGCCCA +
Preference number: 6 (lower is better)
Translates to: CRHSWIPACPPS*LRQVMALACRP
Trigger: TGGGCGACAGGCAAGAGCCATTACTTGTCGCAAGCAAGATGGAGGACAGGCTGGAATCCATGAGTGCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp TTGCAGATGCTCCAGGGCTCTGTGACCCATAGGTACTaGTTGCAGTCACTGTGGCATGGGACAACCTCATAC +
Preference number: 6 (lower is better)
Translates to: LQMLQGSVTHRY*LQSLWHGTTSY
Trigger: GTATGAGGTTGTCCCATGCCACAGTGACTGCAACCAGTACCTATGGGTCACAGAGCCCTGGAGCATCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp ATTGCCACCGATAACAAGGCTTCACTGGGCAGGGTTTaGACTGGTCCATCAGGGAAGGGCATGGTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: IATDNKASLGRV*TGPSGKGMVFH
Trigger: ATGGAAGACCATGCCCTTCCCTGATGGACCAGTCCAAACCCTGCCCAGTGAAGCCTTGTTATCGGTGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp TGGCAAGGAATGAGGCAAGCCTGCTCCAGGAGAGGCTaGGGCTCAAAGTACTCACAGATGATATCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: WQGMRQACSRRG*GSKYSQMISSA
Trigger: TGCGGAGGATATCATCTGTGAGTACTTTGAGCCCAAGCCTCTCCTGGAGCAGGCTTGCCTCATTCCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp GAGCAGGAGGCCTCCCCATTCCAAGTCGTAGTTGTGTaGAAGGACGATACTGAGGTGTCCTCAATGCACTGG +
Preference number: 6 (lower is better)
Translates to: EQEASPFQVVVV*KDDTEVSSMHW
Trigger: CCAGTGCATTGAGGACACCTCAGTATCGTCCTTCAACACAACTACGACTTGGAATGGGGAGGCCTCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CCATTTGTGAGTCTTCCACCTGTAGCTTTGGCACGCTaGAGGTGCCTCACAGGCCTTCTCTTCATAGAGGGG +
Preference number: 6 (lower is better)
Translates to: PFVSLPPVALAR*RCLTGLLFIEG
Trigger: CCCCTCTATGAAGAGAAGGCCTGTGAGGCACCTCAAGCGTGCCAAAGCTACAGGTGGAAGACTCACAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CTGGTCCATCAGGGAAGGGCATGGTCTTCCATCACCTaGAAAGGGCTGGGTCACTGTTCGTCTTCGGATCAT +
Preference number: 6 (lower is better)
Translates to: LVHQGRAWSSIT*KGLGHCSSSDH
Trigger: ATGATCCGAAGACGAACAGTGACCCAGCCCTTTCAAGGTGATGGAAGACCATGCCCTTCCCTGATGGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp TTTGAGCAGGGGCTCCACTCTGACCACTCGGAAACCTGGCACTCTTaGGTGATCACACAGGACTGGAAGGTCATTGGAAGCTTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: FEQGLHSDHSETWHS*VITQDWKVIGSFSC
Trigger: GCAAGAGAAGCTTCCAATGACCTTCCAGTCCTGTGTGATCACCAAAGAGTGCCAGGTTTCCGAGTGGTCAGAGTGGAGCCCCTGCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp CATGGACCCCATTCAGATATCACACAGTCCTCAGGGCATGGTAATTaGCACACTCTAGAGCCCAGGGGCATCTCTTCTGGGTCACAGAGG +
Preference number: 6 (lower is better)
Translates to: HGPHSDITQSSGHGN*HTLEPRGISSGSQR
Trigger: CCTCTGTGACCCAGAAGAGATGCCCCTGGGCTCTAGAGTGTGCAAATTACCATGCCCTGAGGACTGTGTGATATCTGAATGGGGTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp TTACAGTTAGTATGCAGTGTAGTCCATCCCTCCACATaGGCACACCACACAGCCCTCGTTTGGATGCCTCCG +
Preference number: 6 (lower is better)
Translates to: LQLVCSVVHPST*AHHTALVWMPP
Trigger: CGGAGGCATCCAAACGAGGGCTGTGTGGTGTGCTCATGTGGAGGGATGGACTACACTGCATACTAACTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000480061.1
ENST00000617773.1
CDS GCA 72 bp CTTTCCGTTATCTGGCTCGCAGTTTCCCAGTCTCACTaGTTTCCAGTCATAACAGGCAGGCTCTTCACAGGG +
Preference number: 6 (lower is better)
Translates to: LSVIWLAVSQSH*FPVITGRLFTG
Trigger: CCCTGTGAAGAGCCTGCCTGTTATGACTGGAAAGCAGTGAGACTGGGAAACTGCGAGCCAGATAACGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS GCA 72 bp ACTGGCCCCAGGGACCAGTTTGCCAGTGGTACACTGTaGAAGGATGCTCATTACAGCTTCGTACTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: TGPRDQFASGTL*KDAHYSFVLLA
Trigger: TGCAAGAAGTACGAAGCTGTAATGAGCATCCTTGCACAGTGTACCACTGGCAAACTGGTCCCTGGGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp GGTTACTGGAGGGTTGGGTTGGATGTACAGCCCGACTaGTTTTCACATCTCCTCTTTTGTCCTCCATGGTGG +
Preference number: 6 (lower is better)
Translates to: GYWRVGLDVQPD*FSHLLFCPPWW
Trigger: CCACCATGGAGGACAAAAGAGGAGATGTGAAAACCAGTCGGGCTGTACATCCAACCCAACCCTCCAGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp CTTTCCAGTCATAACAGGCAGGCTCTTCACAGGGAATaGCTTCCAGTAAGTGAGGGCAGTTTCCGGTTACCC +
Preference number: 6 (lower is better)
Translates to: LSSHNRQALHRE*LPVSEGSFRLP
Trigger: GGGTAACCGGAAACTGCCCTCACTTACTGGAAGCCATTCCCTGTGAAGAGCCTGCCTGTTATGACTGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS CCA 72 bp CTACACGGTGGGTTACAAGACCTGTCGGCATCAGGCTaGCTCATCACCAAGCAGCCCCCTGTTACATTTATA +
Preference number: 6 (lower is better)
Translates to: LHGGLQDLSASG*LITKQPPVTFI
Trigger: TATAAATGTAACAGGGGGCTGCTTGGTGATGAGCCAGCCTGATGCCGACAGGTCTTGTAACCCACCGTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp CAATCTTGCTGGCAAGGAATGAGGCAAGCCTGCTCCAGGAGAGGCTaGGGCTCAAAGTACTCACAGATGATATCCTCCGCAGGAATGTCT +
Preference number: 6 (lower is better)
Translates to: QSCWQGMRQACSRRG*GSKYSQMISSAGMS
Trigger: AGACATTCCTGCGGAGGATATCATCTGTGAGTACTTTGAGCCCAAGCCTCTCCTGGAGCAGGCTTGCCTCATTCCTTGCCAGCAAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp GGGTTTGGACTGGTCCATCAGGGAAGGGCATGGTCTTCCATCACCTaGAAAGGGCTGGGTCACTGTTCGTCTTCGGATCATTTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: GFGLVHQGRAWSSIT*KGLGHCSSSDHFSC
Trigger: ACAGGAAAAATGATCCGAAGACGAACAGTGACCCAGCCCTTTCAAGGTGATGGAAGACCATGCCCTTCCCTGATGGACCAGTCCAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp GGTTGGGTTGGATGTACAGCCCGACTGGTTTTCACATCTCCTCTTTaGTCCTCCATGGTGGGTAATACCACCACGGGGATAAGTGTGCAT +
Preference number: 6 (lower is better)
Translates to: GWVGCTARLVFTSPL*SSMVGNTTTGISVH
Trigger: ATGCACACTTATCCCCGTGGTGGTATTACCCACCATGGAGGACAAAAGAGGAGATGTGAAAACCAGTCGGGCTGTACATCCAACCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp CATGGGACAACCTCATACACCTGTGCCTGGTTGACATGGTCCAGTTaGGGGCAAGGCCTTCCTCCATTATATGGTTTTTCACGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: HGTTSYTCAWLTWSS*GQGLPPLYGFSRSH
Trigger: ATGGCTGCGTGAAAAACCATATAATGGAGGAAGGCCTTGCCCCAAACTGGACCATGTCAACCAGGCACAGGTGTATGAGGTTGTCCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423059.9
CDS CAA 90 bp GCGACAAGTAATGGCATCACTGTTGATGCACACAACCTCTTGAACTaGCGTGCCTGGACCACACTCCTTTCCGTTATCTGGCTCGCAGTT +
Preference number: 6 (lower is better)
Translates to: ATSNGITVDAHNLLN*RAWTTLLSVIWLAV
Trigger: AACTGCGAGCCAGATAACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGCCATTACTTGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497575.1
CDS TCA 72 bp TGGCATGTTTTTGTCTCGCTACAGTACGAGTGGGGTTaGCTACACGGTGGGTTACAAGACCTGTCGGCATCA +
Preference number: 6 (lower is better)
Translates to: WHVFVSLQYEWG*LHGGLQDLSAS
Trigger: TGATGCCGACAGGTCTTGTAACCCACCGTGTAGTCAACCCCACTCGTACTGTAGCGAGACAAAAACATGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp AAAATTCAGACACGATGCAATCTTGCTGGCAAGGAATaGGGCAAGCCTGCTCCAGGAGAGGCTTGGGCTCAA +
Preference number: 6 (lower is better)
Translates to: KIQTRCNLAGKE*GKPAPGEAWAQ
Trigger: TTGAGCCCAAGCCTCTCCTGGAGCAGGCTTGCCTCATTCCTTGCCAGCAAGATTGCATCGTGTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp TGTCTTGTTGCACGCTCCAAGGGACTAATTGGCATCTaGGCCATTTGTGAGTCTTCCACCTGTAGCTTTGGC +
Preference number: 6 (lower is better)
Translates to: CLVARSKGLIGI*AICESSTCSFG
Trigger: GCCAAAGCTACAGGTGGAAGACTCACAAATGGCGCAGATGCCAATTAGTCCCTTGGAGCGTGCAACAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp CACAGTCTCCATTGCATGAAGAAAACTTGGACCAGCTaGTCAATTGACAGTCATCCTGGCAGGGGATCTGGC +
Preference number: 6 (lower is better)
Translates to: HSLHCMKKTWTS*SIDSHPGRGSG
Trigger: GCCAGATCCCCTGCCAGGATGACTGTCAATTGACCAGCTGGTCCAAGTTTTCTTCATGCAATGGAGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS CAA 72 bp ATGGCATGTTTTTGTCTCGCTACAGTACGAGTGGGGTaGACTACACGGTGGGTTACAAGACCTGTCGGCATC +
Preference number: 6 (lower is better)
Translates to: MACFCLATVRVG*TTRWVTRPVGI
Trigger: GATGCCGACAGGTCTTGTAACCCACCGTGTAGTCAACCCCACTCGTACTGTAGCGAGACAAAAACATGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp GGATGTACAGCCCGACTGGTTTTCACATCTCCTCTTTaGTCCTCCATGGTGGGTAATACCACCACGGGGATA +
Preference number: 6 (lower is better)
Translates to: GCTARLVFTSPL*SSMVGNTTTGI
Trigger: TATCCCCGTGGTGGTATTACCCACCATGGAGGACAAAAGAGGAGATGTGAAAACCAGTCGGGCTGTACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CATTCAGATATCACACAGTCCTCAGGGCATGGTAATTaGCACACTCTAGAGCCCAGGGGCATCTCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: HSDITQSSGHGN*HTLEPRGISSG
Trigger: CCCAGAAGAGATGCCCCTGGGCTCTAGAGTGTGCAAATTACCATGCCCTGAGGACTGTGTGATATCTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp GTCAACTTCTTCTCCATCACTGTTGATGCACACAACCTCTTGAACTaGCGTGCCTGGACCACACTCCTTTCCGTTATCTGGCTCGCAGTT +
Preference number: 6 (lower is better)
Translates to: VNFFSITVDAHNLLN*RAWTTLLSVIWLAV
Trigger: AACTGCGAGCCAGATAACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGGAGAAGAAGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp CTGTCTGTCAACTTCTTCTCCATCACTGTTGATGCACACAACCTCTaGAACTTGCGTGCCTGGACCACACTCCTTTCCGTTATCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LSVNFFSITVDAHNL*NLRAWTTLLSVIWL
Trigger: GAGCCAGATAACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGGAGAAGAAGTTGACAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp AAAGCAAAGCTCTTTCCTGCTATTGTTCGCTTCAGATaGGAAGGAGGGAGAGCGCGTCTAACACCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: KAKLFPAIVRFR*EGGRARLTPGN
Trigger: GTTCCCTGGTGTTAGACGCGCTCTCCCTCCTTCTCATCTGAAGCGAACAATAGCAGGAAAGAGCTTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp GCTCCAGGAGAGGCTTGGGCTCAAAGTACTCACAGATaGTATCCTCCGCAGGAATGTCTTTGTCTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: APGEAWAQSTHR*YPPQECLCLSG
Trigger: TCCAGAAAGACAAAGACATTCCTGCGGAGGATATCATCTGTGAGTACTTTGAGCCCAAGCCTCTCCTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp AAGCAGCCCCCTGTTACATTTATACCATCTGACCTTTaGCACCACACTGTTCGGGAAGAGCCCTTCCAAGCA +
Preference number: 6 (lower is better)
Translates to: KQPPVTFIPSDL*HHTVREEPFQA
Trigger: TGCTTGGAAGGGCTCTTCCCGAACAGTGTGGTGTCAAAGGTCAGATGGTATAAATGTAACAGGGGGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp CATCACCAAGCAGCCCCCTGTTACATTTATACCATCTaGCCTTTGACACCACACTGTTCGGGAAGAGCCCTT +
Preference number: 6 (lower is better)
Translates to: HHQAAPCYIYTI*PLTPHCSGRAL
Trigger: AAGGGCTCTTCCCGAACAGTGTGGTGTCAAAGGTCAGATGGTATAAATGTAACAGGGGGCTGCTTGGTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp AATTCTGGACACTCCTTTTCACTGCCAATGGGAAACTaGCTGATGGTTCGTGTCCTTACACGAGTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: NSGHSFSLPMGN*LMVRVLTRVPA
Trigger: TGCAGGCACTCGTGTAAGGACACGAACCATCAGGCAGTTTCCCATTGGCAGTGAAAAGGAGTGTCCAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp TCTGCTGTATTCTGCATGCATCTCACTTTTCGGGTTTaGACGCCCTCTCCACAGTTCTCCCGCATATTCACA +
Preference number: 6 (lower is better)
Translates to: SAVFCMHLTFRV*TPSPQFSRIFT
Trigger: TGTGAATATGCGGGAGAACTGTGGAGAGGGCGTGCAAACCCGAAAAGTGAGATGCATGCAGAATACAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp TTCACAGGGCATTCCACCATGCAGGACGTGTTCATCTaGCAGTTCTTCTCCAAGCCAAGCGCTTCACAATAT +
Preference number: 6 (lower is better)
Translates to: FTGHSTMQDVFI*QFFSKPSASQY
Trigger: ATATTGTGAAGCGCTTGGCTTGGAGAAGAACTGGCAGATGAACACGTCCTGCATGGTGGAATGCCCTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp TCGGAAACCTGGCACTCTTTGGTGATCACACAGGACTaGAAGGTCATTGGAAGCTTCTCTTGCTGGCAAAAG +
Preference number: 6 (lower is better)
Translates to: SETWHSLVITQD*KVIGSFSCWQK
Trigger: CTTTTGCCAGCAAGAGAAGCTTCCAATGACCTTCCAGTCCTGTGTGATCACCAAAGAGTGCCAGGTTTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp AGCGAATTCCACCTTCTTCACCCGCATAGGCCAGAATaGATCGTGCTCGTATCTGTTTCCCTTCTGTCGTTT +
Preference number: 6 (lower is better)
Translates to: SEFHLLHPHRPE*IVLVSVSLLSF
Trigger: AAACGACAGAAGGGAAACAGATACGAGCACGATCCATTCTGGCCTATGCGGGTGAAGAAGGTGGAATTCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp GCCGTAGCACGCTCGGCAGGGAATTTTTCTCCGCTCTaGGAACGTCTTTTCAAAGAGTACAGAAAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: AVARSAGNFSPL*ERLFKEYRKQS
Trigger: GCTTTGCTTTCTGTACTCTTTGAAAAGACGTTCCAAGAGCGGAGAAAAATTCCCTGCCGAGCGTGCTACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp TTCTCCATCACTGTTGATGCACACAACCTCTTGAACTaGCGTGCCTGGACCACACTCCTTTCCGTTATCTGG +
Preference number: 6 (lower is better)
Translates to: FSITVDAHNLLN*RAWTTLLSVIW
Trigger: CCAGATAACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp ATCTGCTGTATTCTGCATGCATCTCACTTTTCGGGTTaGCACGCCCTCTCCACAGTTCTCCCGCATATTCAC +
Preference number: 6 (lower is better)
Translates to: ICCILHASHFSG*HALSTVLPHIH
Trigger: GTGAATATGCGGGAGAACTGTGGAGAGGGCGTGCAAACCCGAAAAGTGAGATGCATGCAGAATACAGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp AGGCACTCATGGATTCCAGCCTGTCCTCCATCTTGCTaGCGACAAGTAATGGCATCACTGTTGATGCACACA +
Preference number: 6 (lower is better)
Translates to: RHSWIPACPPSC*RQVMASLLMHT
Trigger: TGTGTGCATCAACAGTGATGCCATTACTTGTCGCAAGCAAGATGGAGGACAGGCTGGAATCCATGAGTGCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497575.1
CDS TCA 72 bp ACTTCTTCTCCATCACTGTTGATGCACACAACCTCTTaGACTTGCGTGCCTGGACCACACTCCTTTCCGTTA +
Preference number: 6 (lower is better)
Translates to: TSSPSLLMHTTS*TCVPGPHSFPL
Trigger: TAACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGGAGAAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp ACTGCTTTGATTGCAAGGCAAAACACATTGGGTCCATaGACCCCATTCAGATATCACACAGTCCTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: TALIARQNTLGP*TPFRYHTVLRA
Trigger: TGCCCTGAGGACTGTGTGATATCTGAATGGGGTCCATGGACCCAATGTGTTTTGCCTTGCAATCAAAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp GACACCACACTGTTCGGGAAGAGCCCTTCCAAGCACTaGCCATCCATTTATATTCATAGCACTGTCCATCAT +
Preference number: 6 (lower is better)
Translates to: DTTLFGKSPSKH*PSIYIHSTVHH
Trigger: ATGATGGACAGTGCTATGAATATAAATGGATGGCCAGTGCTTGGAAGGGCTCTTCCCGAACAGTGTGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp AACTTCTTCTCCATCACTGTTGATGCACACAACCTCTaGAACTTGCGTGCCTGGACCACACTCCTTTCCGTT +
Preference number: 6 (lower is better)
Translates to: NFFSITVDAHNL*NLRAWTTLLSV
Trigger: AACGGAAAGGAGTGTGGTCCAGGCACGCAAGTTCAAGAGGTTGTGTGCATCAACAGTGATGGAGAAGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp ACCTCATACACCTGTGCCTGGTTGACATGGTCCAGTTaGGGGCAAGGCCTTCCTCCATTATATGGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: TSYTCAWLTWSS*GQGLPPLYGFS
Trigger: TGAAAAACCATATAATGGAGGAAGGCCTTGCCCCAAACTGGACCATGTCAACCAGGCACAGGTGTATGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423059.9
CDS CAA 90 bp CCAGTGGTACACTGTGCAAGGATGCTCATTACAGCTTCGTACTTCTaGCAAAGCACTGCTATTTGGACAGCGAATTCCACCTTCTTCACC +
Preference number: 6 (lower is better)
Translates to: PVVHCARMLITASYF*QSTAIWTANSTFFT
Trigger: GGTGAAGAAGGTGGAATTCGCTGTCCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTGTAATGAGCATCCTTGCACAGTGTACCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp TCTTTGTCTTTCTGGATGCACGCTATCTCCCTCACCTaGATACCTTCTTCCCCCTTAATGCACTCAAGAGGT +
Preference number: 6 (lower is better)
Translates to: SLSFWMHAISLT*IPSSPLMHSRG
Trigger: ACCTCTTGAGTGCATTAAGGGGGAAGAAGGTATTCAGGTGAGGGAGATAGCGTGCATCCAGAAAGACAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000480061.1
ENST00000617773.1
CDS TCA 72 bp CTTTCTGGTCCTAACTGCACCACAGTCTCCATTGCATaGAGAAAACTTGGACCAGCTGGTCAATTGACAGTC +
Preference number: 6 (lower is better)
Translates to: LSGPNCTTVSIA*RKLGPAGQLTV
Trigger: GACTGTCAATTGACCAGCTGGTCCAAGTTTTCTTCATGCAATGGAGACTGTGGTGCAGTTAGGACCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000497575.1
ENST00000617773.1
CDS GCA 72 bp GATGCTCATTACAGCTTCGTACTTCTTGCAAAGCACTaGTATTTGGACAGCGAATTCCACCTTCTTCACCCG +
Preference number: 6 (lower is better)
Translates to: DAHYSFVLLAKH*YLDSEFHLLHP
Trigger: CGGGTGAAGAAGGTGGAATTCGCTGTCCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTGTAATGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp TCTGTTTCTCTTTTTCTTAATAAGCTCGCGGGCTTCTaGATCCTTTACTCCTTTGCTGCGGTCCTTTTCCCG +
Preference number: 6 (lower is better)
Translates to: SVSLFLNKLAGF*ILYSFAAVLFP
Trigger: CGGGAAAAGGACCGCAGCAAAGGAGTAAAGGATCCAGAAGCCCGCGAGCTTATTAAGAAAAAGAGAAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CCA 72 bp ATTACAGCTTCGTACTTCTTGCAAAGCACTGCTATTTaGACAGCGAATTCCACCTTCTTCACCCGCATAGGC +
Preference number: 6 (lower is better)
Translates to: ITASYFLQSTAI*TANSTFFTRIG
Trigger: GCCTATGCGGGTGAAGAAGGTGGAATTCGCTGTCCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CATTACAGCTTCGTACTTCTTGCAAAGCACTGCTATTaGGACAGCGAATTCCACCTTCTTCACCCGCATAGG +
Preference number: 6 (lower is better)
Translates to: HYSFVLLAKHCY*DSEFHLLHPHR
Trigger: CCTATGCGGGTGAAGAAGGTGGAATTCGCTGTCCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTGTAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CACTGTGCAAGGATGCTCATTACAGCTTCGTACTTCTaGCAAAGCACTGCTATTTGGACAGCGAATTCCACC +
Preference number: 6 (lower is better)
Translates to: HCARMLITASYF*QSTAIWTANST
Trigger: GGTGGAATTCGCTGTCCAAATAGCAGTGCTTTGCAAGAAGTACGAAGCTGTAATGAGCATCCTTGCACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CACAAGCCTGCCATTTTGATCGTAGCATGCCATTGCTaGGTAACGATATCCTTGTCCGCATTCCTTGATGTC +
Preference number: 6 (lower is better)
Translates to: HKPAILIVACHC*VTISLSAFLDV
Trigger: GACATCAAGGAATGCGGACAAGGATATCGTTACCAAGCAATGGCATGCTACGATCAAAATGGCAGGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp AGATGTTTCCACAAGCCTGCCATTTTGATCGTAGCATGCCATTGCTaGGTAACGATATCCTTGTCCGCATTCCTTGATGTCTCCTTGTAC +
Preference number: 6 (lower is better)
Translates to: RCFHKPAILIVACHC*VTISLSAFLDVSLY
Trigger: GTACAAGGAGACATCAAGGAATGCGGACAAGGATATCGTTACCAAGCAATGGCATGCTACGATCAAAATGGCAGGCTTGTGGAAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp GTAACCATGGCTGTTACATCTAGATGTTTCCACAAGCCTGCCATTTaGATCGTAGCATGCCATTGCTTGGTAACGATATCCTTGTCCGCA +
Preference number: 6 (lower is better)
Translates to: VTMAVTSRCFHKPAI*IVACHCLVTISLSA
Trigger: TGCGGACAAGGATATCGTTACCAAGCAATGGCATGCTACGATCAAAATGGCAGGCTTGTGGAAACATCTAGATGTAACAGCCATGGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp CGTCTTCGGATCATTTTTCCTGTGAGGCCACATGTTTaGGAACATTCTGACCAAGGAGACCAATCAGAAAGC +
Preference number: 6 (lower is better)
Translates to: RLRIIFPVRPHV*EHSDQGDQSES
Trigger: GCTTTCTGATTGGTCTCCTTGGTCAGAATGTTCTCAAACATGTGGCCTCACAGGAAAAATGATCCGAAGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp TTCCACAAGCCTGCCATTTTGATCGTAGCATGCCATTaGTTGGTAACGATATCCTTGTCCGCATTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: FHKPAILIVACH*LVTISLSAFLD
Trigger: ATCAAGGAATGCGGACAAGGATATCGTTACCAAGCAATGGCATGCTACGATCAAAATGGCAGGCTTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp AGATGTTTCCACAAGCCTGCCATTTTGATCGTAGCATaGCATTGCTTGGTAACGATATCCTTGTCCGCATTC +
Preference number: 6 (lower is better)
Translates to: RCFHKPAILIVA*HCLVTISLSAF
Trigger: GAATGCGGACAAGGATATCGTTACCAAGCAATGGCATGCTACGATCAAAATGGCAGGCTTGTGGAAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp TGTTGTGGCCTCTGGACATCTATGAAGTCAGAAAGCCGAAACTGGTaGTTGCCAGGAAAAGTTATATGTTACATGTCGGCATCTCCATCA +
Preference number: 6 (lower is better)
Translates to: CCGLWTSMKSESRNW*LPGKVICYMSASPS
Trigger: TGATGGAGATGCCGACATGTAACATATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTCTGACTTCATAGATGTCCAGAGGCCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS TCA 72 bp CCATTGCTTGGTAACGATATCCTTGTCCGCATTCCTTaGTGTCTCCTTGTACTTTCATTCCCAGCAACACTT +
Preference number: 6 (lower is better)
Translates to: PLLGNDILVRIP*CLLVLSFPATL
Trigger: AAGTGTTGCTGGGAATGAAAGTACAAGGAGACATCAAGGAATGCGGACAAGGATATCGTTACCAAGCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp TTCCAAGGTCCCAGTCTCCAGTCGTACAACTCTTTGTaGCAATCGCAAACTTTGAAACAATTCTGCTGGTTA +
Preference number: 6 (lower is better)
Translates to: FQGPSLQSYNSL*QSQTLKQFCWL
Trigger: TAACCAGCAGAATTGTTTCAAAGTTTGCGATTGGCACAAAGAGTTGTACGACTGGAGACTGGGACCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000480061.1
ENST00000617773.1
CDS CCA 72 bp GGCCTCTGGACATCTATGAAGTCAGAAAGCCGAAACTaGTTGTTGCCAGGAAAAGTTATATGTTACATGTCG +
Preference number: 6 (lower is better)
Translates to: GLWTSMKSESRN*LLPGKVICYMS
Trigger: CGACATGTAACATATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTCTGACTTCATAGATGTCCAGAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp GCTGTTACATCTAGATGTTTCCACAAGCCTGCCATTTaGATCGTAGCATGCCATTGCTTGGTAACGATATCC +
Preference number: 6 (lower is better)
Translates to: AVTSRCFHKPAI*IVACHCLVTIS
Trigger: GGATATCGTTACCAAGCAATGGCATGCTACGATCAAAATGGCAGGCTTGTGGAAACATCTAGATGTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp AACTCTTTGTGCCAATCGCAAACTTTGAAACAATTCTGCTGGTTATaGGGTCTCTCGGCCTGCTTACAGTTAGTATGCAGTGTAGTCCAT +
Preference number: 6 (lower is better)
Translates to: NSLCQSQTLKQFCWL*GLSACLQLVCSVVH
Trigger: ATGGACTACACTGCATACTAACTGTAAGCAGGCCGAGAGACCCAATAACCAGCAGAATTGTTTCAAAGTTTGCGATTGGCACAAAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000480061.1
ENST00000617773.1
CDS CAA 90 bp TCAGGTCAACTGACTTGCCATCACTTCGAACACAATCCAACATCCTaGTTTTTATTCCATTTCCACAAACTGCCTTCTCACTCAGCTGAC +
Preference number: 6 (lower is better)
Translates to: SGQLTCHHFEHNPTS*FLFHFHKLPSHSAD
Trigger: GTCAGCTGAGTGAGAAGGCAGTTTGTGGAAATGGAATAAAAACAAGGATGTTGGATTGTGTTCGAAGTGATGGCAAGTCAGTTGACCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS GCA 72 bp AACTCTTTGTGCCAATCGCAAACTTTGAAACAATTCTaGTGGTTATTGGGTCTCTCGGCCTGCTTACAGTTA +
Preference number: 6 (lower is better)
Translates to: NSLCQSQTLKQF*WLLGLSACLQL
Trigger: TAACTGTAAGCAGGCCGAGAGACCCAATAACCAGCAGAATTGTTTCAAAGTTTGCGATTGGCACAAAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423059.9
ENST00000480061.1
ENST00000617773.1
CDS GCA 72 bp AGCCAAGCGCTTCACAATATTTCAGGTCAACTGACTTaGCATCACTTCGAACACAATCCAACATCCTTGTTT +
Preference number: 6 (lower is better)
Translates to: SQALHNISGQLT*HHFEHNPTSLF
Trigger: AAACAAGGATGTTGGATTGTGTTCGAAGTGATGGCAAGTCAGTTGACCTGAAATATTGTGAAGCGCTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp CTCTGGACATCTATGAAGTCAGAAAGCCGAAACTGGTaGTTGCCAGGAAAAGTTATATGTTACATGTCGGCA +
Preference number: 6 (lower is better)
Translates to: LWTSMKSESRNW*LPGKVICYMSA
Trigger: TGCCGACATGTAACATATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTCTGACTTCATAGATGTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp TTGATCGTAGCATGCCATTGCTTGGTAACGATATCCTaGTCCGCATTCCTTGATGTCTCCTTGTACTTTCAT +
Preference number: 6 (lower is better)
Translates to: LIVACHCLVTIS*SAFLDVSLYFH
Trigger: ATGAAAGTACAAGGAGACATCAAGGAATGCGGACAAGGATATCGTTACCAAGCAATGGCATGCTACGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp AAGCCAAGCGCTTCACAATATTTCAGGTCAACTGACTaGCCATCACTTCGAACACAATCCAACATCCTTGTT +
Preference number: 6 (lower is better)
Translates to: KPSASQYFRSTD*PSLRTQSNILV
Trigger: AACAAGGATGTTGGATTGTGTTCGAAGTGATGGCAAGTCAGTTGACCTGAAATATTGTGAAGCGCTTGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp AGTTCAATGTCAGCACAGAATTCCTCATCCACCACTTaGCTGAAATCATCAGCTGACCCATCACTTACTACA +
Preference number: 6 (lower is better)
Translates to: SSMSAQNSSSTT*LKSSADPSLTT
Trigger: TGTAGTAAGTGATGGGTCAGCTGATGATTTCAGCAAAGTGGTGGATGAGGAATTCTGTGCTGACATTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 72 bp TGGACATCTATGAAGTCAGAAAGCCGAAACTGGTTGTaGCCAGGAAAAGTTATATGTTACATGTCGGCATCT +
Preference number: 6 (lower is better)
Translates to: WTSMKSESRNWL*PGKVICYMSAS
Trigger: AGATGCCGACATGTAACATATAACTTTTCCTGGCAACAACCAGTTTCGGCTTTCTGACTTCATAGATGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408005.2
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp TTCTTCTCCAAGCCAAGCGCTTCACAATATTTCAGGTCAACTGACTaGCCATCACTTCGAACACAATCCAACATCCTTGTTTTTATTCCA +
Preference number: 6 (lower is better)
Translates to: FFSKPSASQYFRSTD*PSLRTQSNILVFIP
Trigger: TGGAATAAAAACAAGGATGTTGGATTGTGTTCGAAGTGATGGCAAGTCAGTTGACCTGAAATATTGTGAAGCGCTTGGCTTGGAGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1
CDS CAA 90 bp TCTATAATGAGTTCAATGTCAGCACAGAATTCCTCATCCACCACTTaGCTGAAATCATCAGCTGACCCATCACTTACTACACAAGAAATG +
Preference number: 6 (lower is better)
Translates to: SIMSSMSAQNSSSTT*LKSSADPSLTTQEM
Trigger: CATTTCTTGTGTAGTAAGTGATGGGTCAGCTGATGATTTCAGCAAAGTGGTGGATGAGGAATTCTGTGCTGACATTGAACTCATTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423059.9
ENST00000617773.1