Pregenerated sensors for THSD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000136114Ensembl transcript IDs: ENST00000258613.5, ENST00000349258.8, ENST00000648254.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGGCGTGGTCGGTTCCCGCCCCTTCTGGGCAGCGCATCCTTTCCTaGCGGTCCCCAGCTCGCCAGCTGCTGGACAGGAAACAGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RAWSVPAPSGQRILS*RSPARQLLDRKQAG Trigger: TCCTGCCTGTTTCCTGTCCAGCAGCTGGCGAGCTGGGGACCGGCAGGAAAGGATGCGCTGCCCAGAAGGGGCGGGAACCGACCACGCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000349258.8 |
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| CDS CCA 90 bp | CTGCTCGCAGGTCCGCGTCCTAGAGCTGTAGGCAGGGGCCTGCCGTaGAGTCAGAGTGGACATGCTCCTCTCTCGGAACGGCCGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: LLAGPRPRAVGRGLP*SQSGHAPLSERPGL Trigger: CAGGCCCGGCCGTTCCGAGAGAGGAGCATGTCCACTCTGACTCCACGGCAGGCCCCTGCCTACAGCTCTAGGACGCGGACCTGCGAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 90 bp | GGACTCCCCGTGGGCCCGTCTCCCCCATCCGAGAAGCTCCCGCGCTaGTCGCTCAGCTCGCAGATATTCTCCTCGTCCGAGTTCTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: GLPVGPSPPSEKLPR*SLSSQIFSSSEFFR Trigger: CCGGAAGAACTCGGACGAGGAGAATATCTGCGAGCTGAGCGAGCAGCGCGGGAGCTTCTCGGATGGGGGAGACGGGCCCACGGGGAGTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 90 bp | CTTCTGGGCAGCGCATCCTTTCCTGCCGGTCCCCAGCTCGCCAGCTaGTGGACAGGAAACAGGCAGGAAACGCGCGGCCAGCCAAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLGSASFPAGPQLAS*WTGNRQETRGQPRS Trigger: GGACCTTGGCTGGCCGCGCGTTTCCTGCCTGTTTCCTGTCCAGCAGCTGGCGAGCTGGGGACCGGCAGGAAAGGATGCGCTGCCCAGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000349258.8 |
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| CDS TCA 90 bp | GGAACGGCCGGGCCTGCCTGGCTTCATGGAAACTCGCTGTCCTCCTaGAATGGGCGTTCCTGGCATGGCTCCTTTCGGACGGGCCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: GTAGPAWLHGNSLSS*NGRSWHGSFRTGPL Trigger: GAGGGGGCCCGTCCGAAAGGAGCCATGCCAGGAACGCCCATTTCAGGAGGACAGCGAGTTTCCATGAAGCCAGGCAGGCCCGGCCGTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | GGCCGGGCCTGCCTGGCTTCATGGAAACTCGCTGTCCTCCTGAAATaGGCGTTCCTGGCATGGCTCCTTTCGGACGGGCCCCCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GRACLASWKLAVLLK*AFLAWLLSDGPPLL Trigger: CAGCAGAGGGGGCCCGTCCGAAAGGAGCCATGCCAGGAACGCCCATTTCAGGAGGACAGCGAGTTTCCATGAAGCCAGGCAGGCCCGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 90 bp | TTCCTGGCATGGCTCCTTTCGGACGGGCCCCCTCTGCTGCCCACGTaGCTTGCCTGTGACTTGCGGATCAGAGTCTGGCTGGGGCTTATG | + |
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Preference number: 5 (lower is better) Translates to: FLAWLLSDGPPLLPT*LACDLRIRVWLGLM Trigger: CATAAGCCCCAGCCAGACTCTGATCCGCAAGTCACAGGCAAGGCACGTGGGCAGCAGAGGGGGCCCGTCCGAAAGGAGCCATGCCAGGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | GCTTCATGGAAACTCGCTGTCCTCCTGAAATGGGCGTTCCTGGCATaGCTCCTTTCGGACGGGCCCCCTCTGCTGCCCACGTGCCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: ASWKLAVLLKWAFLA*LLSDGPPLLPTCLA Trigger: GGCAAGGCACGTGGGCAGCAGAGGGGGCCCGTCCGAAAGGAGCCATGCCAGGAACGCCCATTTCAGGAGGACAGCGAGTTTCCATGAAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 90 bp | ACAGAGGTGGGATTATCTTCTGGGCGTTGGACTGGAAGCTCTCGCTaGCAGAGGCATCATCCTCGGGAGGTACCGGCCCGCTCCGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: TEVGLSSGRWTGSSR*QRHHPREVPARSAC Trigger: ACAGGCGGAGCGGGCCGGTACCTCCCGAGGATGATGCCTCTGGCAGCGAGAGCTTCCAGTCCAACGCCCAGAAGATAATCCCACCTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 90 bp | AGGAAACAGGTGGGCACCTCGACTCTGAGGCCTAAATCTGTCCTCTaGCTGCTCGCAGGTCCGCGTCCTAGAGCTGTAGGCAGGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RKQVGTSTLRPKSVL*LLAGPRPRAVGRGL Trigger: CAGGCCCCTGCCTACAGCTCTAGGACGCGGACCTGCGAGCAGGCAGAGGACAGATTTAGGCCTCAGAGTCGAGGTGCCCACCTGTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | GGGGGAGTGGATGGAGTTGTGTCGAGCAGGTGTGCTGCACTTGGCTaGCCGGCCGAACCTCCTCCACAGCGTGATGAGCACAGTGGCAAT | + |
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Preference number: 5 (lower is better) Translates to: GGVDGVVSSRCAALG*PAEPPPQRDEHSGN Trigger: ATTGCCACTGTGCTCATCACGCTGTGGAGGAGGTTCGGCCGGCCAGCCAAGTGCAGCACACCTGCTCGACACAACTCCATCCACTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | GGAGGGAGGCCTTTCCCCGGCACTGACCGCGGGCTGCTCCGGAAATaGGGATTTGATCCGGAACTTGTTTGCTGCAGCTTCTTCCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GGRPFPGTDRGLLRK*GFDPELVCCSFFRA Trigger: AGCCCGGAAGAAGCTGCAGCAAACAAGTTCCGGATCAAATCCCCATTTCCGGAGCAGCCCGCGGTCAGTGCCGGGGAAAGGCCTCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 90 bp | AGATCCAGCCTGGAGGGAGGCCTTTCCCCGGCACTGACCGCGGGCTaGTCCGGAAATGGGGATTTGATCCGGAACTTGTTTGCTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RSSLEGGLSPALTAG*SGNGDLIRNLFAAA Trigger: AGCTGCAGCAAACAAGTTCCGGATCAAATCCCCATTTCCGGAGCAGCCCGCGGTCAGTGCCGGGGAAAGGCCTCCCTCCAGGCTGGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 90 bp | CGTGGAGTCAGAGTGGACATGCTCCTCTCTCGGAACGGCCGGGCCTaGCTGGCTTCATGGAAACTCGCTGTCCTCCTGAAATGGGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: RGVRVDMLLSRNGRA*LASWKLAVLLKWAF Trigger: GAACGCCCATTTCAGGAGGACAGCGAGTTTCCATGAAGCCAGGCAGGCCCGGCCGTTCCGAGAGAGGAGCATGTCCACTCTGACTCCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | TTCCCAGGGTATCTGGGGGCCTCCTTGAAGACAGTGACCACTCCTTaGACGAAGGTGCATGGTGGAGGCAGCACTGTCACCTCTACCCCG | + |
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Preference number: 5 (lower is better) Translates to: FPGYLGASLKTVTTP*TKVHGGGSTVTSTP Trigger: CGGGGTAGAGGTGACAGTGCTGCCTCCACCATGCACCTTCGTCCAAGGAGTGGTCACTGTCTTCAAGGAGGCCCCCAGATACCCTGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | AGATATTCTCCTCGTCCGAGTTCTTCCGGAAGCTGGGGGAGTGGATaGAGTTGTGTCGAGCAGGTGTGCTGCACTTGGCTGGCCGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: RYSPRPSSSGSWGSG*SCVEQVCCTWLAGR Trigger: TCGGCCGGCCAGCCAAGTGCAGCACACCTGCTCGACACAACTCCATCCACTCCCCCAGCTTCCGGAAGAACTCGGACGAGGAGAATATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | TCGCAGATATTCTCCTCGTCCGAGTTCTTCCGGAAGCTGGGGGAGTaGATGGAGTTGTGTCGAGCAGGTGTGCTGCACTTGGCTGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SQIFSSSEFFRKLGE*MELCRAGVLHLAGR Trigger: CCGGCCAGCCAAGTGCAGCACACCTGCTCGACACAACTCCATCCACTCCCCCAGCTTCCGGAAGAACTCGGACGAGGAGAATATCTGCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | CGCTCAGCTCGCAGATATTCTCCTCGTCCGAGTTCTTCCGGAAGCTaGGGGAGTGGATGGAGTTGTGTCGAGCAGGTGTGCTGCACTTGG | + |
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Preference number: 5 (lower is better) Translates to: RSARRYSPRPSSSGS*GSGWSCVEQVCCTW Trigger: CCAAGTGCAGCACACCTGCTCGACACAACTCCATCCACTCCCCCAGCTTCCGGAAGAACTCGGACGAGGAGAATATCTGCGAGCTGAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | GGCCTCCTTGAAGACAGTGACCACTCCTTGGACGAAGGTGCATGGTaGAGGCAGCACTGTCACCTCTACCCCGGACTCACATGTGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: GLLEDSDHSLDEGAW*RQHCHLYPGLTCEF Trigger: GAACTCACATGTGAGTCCGGGGTAGAGGTGACAGTGCTGCCTCCACCATGCACCTTCGTCCAAGGAGTGGTCACTGTCTTCAAGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | CGTGCCTTGCCTGTGACTTGCGGATCAGAGTCTGGCTGGGGCTTATaGCACAACTGGCCTGAGTCACATTTAGATCCAGCCTGGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RALPVTCGSESGWGL*HNWPESHLDPAWRE Trigger: CTCCCTCCAGGCTGGATCTAAATGTGACTCAGGCCAGTTGTGCCATAAGCCCCAGCCAGACTCTGATCCGCAAGTCACAGGCAAGGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | CTTCCGGGCTTTCCAAATCTAAGGGAGCGCTGGGGGCCGCATCAATaGCAGTGTCTGTCAGGGGACTCTGAGACACGTGATACACTTTGG | + |
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Preference number: 5 (lower is better) Translates to: LPGFPNLRERWGPHQ*QCLSGDSETRDTLW Trigger: CCAAAGTGTATCACGTGTCTCAGAGTCCCCTGACAGACACTGCCATTGATGCGGCCCCCAGCGCTCCCTTAGATTTGGAAAGCCCGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | TGTTTGCTGCAGCTTCTTCCGGGCTTTCCAAATCTAAGGGAGCGCTaGGGGCCGCATCAATGGCAGTGTCTGTCAGGGGACTCTGAGACA | + |
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Preference number: 5 (lower is better) Translates to: CLLQLLPGFPNLRER*GPHQWQCLSGDSET Trigger: TGTCTCAGAGTCCCCTGACAGACACTGCCATTGATGCGGCCCCCAGCGCTCCCTTAGATTTGGAAAGCCCGGAAGAAGCTGCAGCAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 90 bp | TGGAAATGCTCCAGTTTTTCAGGAAACAGGTGGGCACCTCGACTCTaGGGCCTAAATCTGTCCTCTGCCTGCTCGCAGGTCCGCGTCCTA | + |
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Preference number: 5 (lower is better) Translates to: WKCSSFSGNRWAPRL*GLNLSSACSQVRVL Trigger: TAGGACGCGGACCTGCGAGCAGGCAGAGGACAGATTTAGGCCTCAGAGTCGAGGTGCCCACCTGTTTCCTGAAAAACTGGAGCATTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 90 bp | AAGCAGCTTCAGCACCACGGTGACATAGGCTTCTGGCCCCAAGGGTaGACAGCCAAACTCAACCCACTGACCTTGAGCAAGTTCTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: KQLQHHGDIGFWPQG*TAKLNPLTLSKFCP Trigger: AGGACAGAACTTGCTCAAGGTCAGTGGGTTGAGTTTGGCTGTGCACCCTTGGGGCCAGAAGCCTATGTCACCGTGGTGCTGAAGCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 90 bp | TGCATGGTGGAGGCAGCACTGTCACCTCTACCCCGGACTCACATGTaGGTTCTGGCACCATCACCAGTTTGTATCCAAATTTCTGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: CMVEAALSPLPRTHM*VLAPSPVCIQISGP Trigger: TGGCCCAGAAATTTGGATACAAACTGGTGATGGTGCCAGAACTCACATGTGAGTCCGGGGTAGAGGTGACAGTGCTGCCTCCACCATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | TGGAGGCAGCACTGTCACCTCTACCCCGGACTCACATGTGAGTTCTaGCACCATCACCAGTTTGTATCCAAATTTCTGGGCCAGGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: WRQHCHLYPGLTCEF*HHHQFVSKFLGQVN Trigger: ATTGACCTGGCCCAGAAATTTGGATACAAACTGGTGATGGTGCCAGAACTCACATGTGAGTCCGGGGTAGAGGTGACAGTGCTGCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 90 bp | GTTCCCTGGGACTGGTTGGTCAGGAGGTACTTGGTAGTTACAGTCTaGTTGGTGTTGGCCTCCAACAGCAGGACAGATACATTCCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: VPWDWLVRRYLVVTV*LVLASNSRTDTFLS Trigger: ACTGAGGAATGTATCTGTCCTGCTGTTGGAGGCCAACACCAATCAGACTGTAACTACCAAGTACCTCCTGACCAACCAGTCCCAGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 90 bp | TGGAAGGTGCCTTCTGCTGCCTTGGCACTCCTATTCAAGTCAACGTaGAAGACAGGCCATTCCACCTTCAGAAAGGCACTTTTCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: WKVPSAALALLFKST*KTGHSTFRKALFSH Trigger: GTGGGAGAAAAGTGCCTTTCTGAAGGTGGAATGGCCTGTCTTTCACGTTGACTTGAATAGGAGTGCCAAGGCAGCAGAAGGCACCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | GATTTAGGGAGAGGGTTTAATGGACCACGGGTTCCACTTGCCTCTTaGAAATGCTCCAGTTTTTCAGGAAACAGGTGGGCACCTCGACTC | + |
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Preference number: 5 (lower is better) Translates to: DLGRGFNGPRVPLAS*KCSSFSGNRWAPRL Trigger: GAGTCGAGGTGCCCACCTGTTTCCTGAAAAACTGGAGCATTTCCAAGAGGCAAGTGGAACCCGTGGTCCATTAAACCCTCTCCCTAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 90 bp | CACAGCCAAACTCAACCCACTGACCTTGAGCAAGTTCTGTCCTTTTaGTGGTTCTTATTTCCAGCGGCTGTCTTGAATTTCTTCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: HSQTQPTDLEQVLSF*WFLFPAAVLNFFLP Trigger: AGGCAAGAAGAAATTCAAGACAGCCGCTGGAAATAAGAACCAGCAAAAGGACAGAACTTGCTCAAGGTCAGTGGGTTGAGTTTGGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | AGCCAAACTCAACCCACTGACCTTGAGCAAGTTCTGTCCTTTTGCTaGTTCTTATTTCCAGCGGCTGTCTTGAATTTCTTCTTGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SQTQPTDLEQVLSFC*FLFPAAVLNFFLPQ Trigger: CTGAGGCAAGAAGAAATTCAAGACAGCCGCTGGAAATAAGAACCAGCAAAAGGACAGAACTTGCTCAAGGTCAGTGGGTTGAGTTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 90 bp | AGCAAGTTCTGTCCTTTTGCTGGTTCTTATTTCCAGCGGCTGTCTTaGATTTCTTCTTGCCTCAGGAAGACTGTTGGTGAAGATGACATC | + |
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Preference number: 5 (lower is better) Translates to: SKFCPFAGSYFQRLS*ISSCLRKTVGEDDI Trigger: GATGTCATCTTCACCAACAGTCTTCCTGAGGCAAGAAGAAATTCAAGACAGCCGCTGGAAATAAGAACCAGCAAAAGGACAGAACTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | AGGACAGATACATTCCTCAGTGTCCCATTAGCACCATCAAAATACTaGAAATCCACATACACTGTGTCGTTGCTTAGTGCTACATGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RTDTFLSVPLAPSKY*KSTYTVSLLSATWP Trigger: AGGCCATGTAGCACTAAGCAACGACACAGTGTATGTGGATTTCCAGTATTTTGATGGTGCTAATGGGACACTGAGGAATGTATCTGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 90 bp | AAATACTGGAAATCCACATACACTGTGTCGTTGCTTAGTGCTACATaGCCTGGCTCTCTCAAGAGAAGATATTCAGCTTCTCCAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: KYWKSTYTVSLLSAT*PGSLKRRYSASPRT Trigger: TGTTCTTGGAGAAGCTGAATATCTTCTCTTGAGAGAGCCAGGCCATGTAGCACTAAGCAACGACACAGTGTATGTGGATTTCCAGTATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 72 bp | GAGCGCCAAGCATCCCGCGTCCCAGACTGCACGCCCTaGCCCCGCGGCGTTCGGCTCCCACAGCCCCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: ERQASRVPDCTP*PRGVRLPQPRG Trigger: CCCGCGGGGCTGTGGGAGCCGAACGCCGCGGGGTCAGGGCGTGCAGTCTGGGACGCGGGATGCTTGGCGCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000349258.8 |
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| CDS CCA 72 bp | CACACGGGACCGGGCGTGGTCGGTTCCCGCCCCTTCTaGGCAGCGCATCCTTTCCTGCCGGTCCCCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: HTGPGVVGSRPF*AAHPFLPVPSS Trigger: CGAGCTGGGGACCGGCAGGAAAGGATGCGCTGCCCAGAAGGGGCGGGAACCGACCACGCCCGGTCCCGTGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000349258.8 |
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| CDS GCA 72 bp | GAGGTACCGGCCCGCTCCGCCTGTAGGTCAGAGGGATaGCTGTGTCCCCTGGACTCCCCGTGGGCCCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: EVPARSACRSEG*LCPLDSPWARL Trigger: GAGACGGGCCCACGGGGAGTCCAGGGGACACAGGCATCCCTCTGACCTACAGGCGGAGCGGGCCGGTACCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 72 bp | GTGGGCCCGTCTCCCCCATCCGAGAAGCTCCCGCGCTaGTCGCTCAGCTCGCAGATATTCTCCTCGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: VGPSPPSEKLPR*SLSSQIFSSSE Trigger: CTCGGACGAGGAGAATATCTGCGAGCTGAGCGAGCAGCGCGGGAGCTTCTCGGATGGGGGAGACGGGCCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 72 bp | TGTAGGCAGGGGCCTGCCGTGGAGTCAGAGTGGACATaGTCCTCTCTCGGAACGGCCGGGCCTGCCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: CRQGPAVESEWT*SSLGTAGPAWL Trigger: AAGCCAGGCAGGCCCGGCCGTTCCGAGAGAGGAGCATGTCCACTCTGACTCCACGGCAGGCCCCTGCCTACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 72 bp | AGCGCATCCTTTCCTGCCGGTCCCCAGCTCGCCAGCTaGTGGACAGGAAACAGGCAGGAAACGCGCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SASFPAGPQLAS*WTGNRQETRGQ Trigger: CTGGCCGCGCGTTTCCTGCCTGTTTCCTGTCCAGCAGCTGGCGAGCTGGGGACCGGCAGGAAAGGATGCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000349258.8 |
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| CDS CAA 72 bp | TCCTTTCGGACGGGCCCCCTCTGCTGCCCACGTGCCTaGCCTGTGACTTGCGGATCAGAGTCTGGCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: SFRTGPLCCPRA*PVTCGSESGWG Trigger: GCCCCAGCCAGACTCTGATCCGCAAGTCACAGGCAAGGCACGTGGGCAGCAGAGGGGGCCCGTCCGAAAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | GGTCCGCGTCCTAGAGCTGTAGGCAGGGGCCTGCCGTaGAGTCAGAGTGGACATGCTCCTCTCTCGGAACGG | + |
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Preference number: 6 (lower is better) Translates to: GPRPRAVGRGLP*SQSGHAPLSER Trigger: CCGTTCCGAGAGAGGAGCATGTCCACTCTGACTCCACGGCAGGCCCCTGCCTACAGCTCTAGGACGCGGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | AAACTCGCTGTCCTCCTGAAATGGGCGTTCCTGGCATaGCTCCTTTCGGACGGGCCCCCTCTGCTGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: KLAVLLKWAFLA*LLSDGPPLLPT Trigger: CGTGGGCAGCAGAGGGGGCCCGTCCGAAAGGAGCCATGCCAGGAACGCCCATTTCAGGAGGACAGCGAGTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 90 bp | AAGCTGGGGGAGTGGATGGAGTTGTGTCGAGCAGGTGTGCTGCACTaGGCTGGCCGGCCGAACCTCCTCCACAGCGTGATGAGCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: KLGEWMELCRAGVLH*AGRPNLLHSVMSTV Trigger: CACTGTGCTCATCACGCTGTGGAGGAGGTTCGGCCGGCCAGCCAAGTGCAGCACACCTGCTCGACACAACTCCATCCACTCCCCCAGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 90 bp | TTCTCCTCGTCCGAGTTCTTCCGGAAGCTGGGGGAGTGGATGGAGTaGTGTCGAGCAGGTGTGCTGCACTTGGCTGGCCGGCCGAACCTC | + |
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Preference number: 6 (lower is better) Translates to: FSSSEFFRKLGEWME*CRAGVLHLAGRPNL Trigger: GAGGTTCGGCCGGCCAGCCAAGTGCAGCACACCTGCTCGACACAACTCCATCCACTCCCCCAGCTTCCGGAAGAACTCGGACGAGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 72 bp | GGATTATCTTCTGGGCGTTGGACTGGAAGCTCTCGCTaGCAGAGGCATCATCCTCGGGAGGTACCGGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GLSSGRWTGSSR*QRHHPREVPAR Trigger: GCGGGCCGGTACCTCCCGAGGATGATGCCTCTGGCAGCGAGAGCTTCCAGTCCAACGCCCAGAAGATAATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 72 bp | GTGGGCACCTCGACTCTGAGGCCTAAATCTGTCCTCTaGCTGCTCGCAGGTCCGCGTCCTAGAGCTGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: VGTSTLRPKSVL*LLAGPRPRAVG Trigger: GCCTACAGCTCTAGGACGCGGACCTGCGAGCAGGCAGAGGACAGATTTAGGCCTCAGAGTCGAGGTGCCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | GATGGAGTTGTGTCGAGCAGGTGTGCTGCACTTGGCTaGCCGGCCGAACCTCCTCCACAGCGTGATGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: DGVVSSRCAALG*PAEPPPQRDEH Trigger: GTGCTCATCACGCTGTGGAGGAGGTTCGGCCGGCCAGCCAAGTGCAGCACACCTGCTCGACACAACTCCATC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | CTCCTCTCTCGGAACGGCCGGGCCTGCCTGGCTTCATaGAAACTCGCTGTCCTCCTGAAATGGGCGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLSRNGRACLAS*KLAVLLKWAFL Trigger: CAGGAACGCCCATTTCAGGAGGACAGCGAGTTTCCATGAAGCCAGGCAGGCCCGGCCGTTCCGAGAGAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 72 bp | GAGTGGATGGAGTTGTGTCGAGCAGGTGTGCTGCACTaGGCTGGCCGGCCGAACCTCCTCCACAGCGTGATG | + |
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Preference number: 6 (lower is better) Translates to: EWMELCRAGVLH*AGRPNLLHSVM Trigger: CATCACGCTGTGGAGGAGGTTCGGCCGGCCAGCCAAGTGCAGCACACCTGCTCGACACAACTCCATCCACTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 72 bp | GGGCCTGCCTGGCTTCATGGAAACTCGCTGTCCTCCTaGAATGGGCGTTCCTGGCATGGCTCCTTTCGGACG | + |
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Preference number: 6 (lower is better) Translates to: GPAWLHGNSLSS*NGRSWHGSFRT Trigger: CGTCCGAAAGGAGCCATGCCAGGAACGCCCATTTCAGGAGGACAGCGAGTTTCCATGAAGCCAGGCAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 72 bp | CTGGAGGGAGGCCTTTCCCCGGCACTGACCGCGGGCTaGTCCGGAAATGGGGATTTGATCCGGAACTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LEGGLSPALTAG*SGNGDLIRNLF Trigger: AAACAAGTTCCGGATCAAATCCCCATTTCCGGAGCAGCCCGCGGTCAGTGCCGGGGAAAGGCCTCCCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | CCTCGTCCGAGTTCTTCCGGAAGCTGGGGGAGTGGATaGAGTTGTGTCGAGCAGGTGTGCTGCACTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PRPSSSGSWGSG*SCVEQVCCTWL Trigger: CAGCCAAGTGCAGCACACCTGCTCGACACAACTCCATCCACTCCCCCAGCTTCCGGAAGAACTCGGACGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | TGCCTGGCTTCATGGAAACTCGCTGTCCTCCTGAAATaGGCGTTCCTGGCATGGCTCCTTTCGGACGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: CLASWKLAVLLK*AFLAWLLSDGP Trigger: GGGCCCGTCCGAAAGGAGCCATGCCAGGAACGCCCATTTCAGGAGGACAGCGAGTTTCCATGAAGCCAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 90 bp | CTTCCCAGGGTATCTGGGGGCCTCCTTGAAGACAGTGACCACTCCTaGGACGAAGGTGCATGGTGGAGGCAGCACTGTCACCTCTACCCC | + |
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Preference number: 6 (lower is better) Translates to: LPRVSGGLLEDSDHS*DEGAWWRQHCHLYP Trigger: GGGGTAGAGGTGACAGTGCTGCCTCCACCATGCACCTTCGTCCAAGGAGTGGTCACTGTCTTCAAGGAGGCCCCCAGATACCCTGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 72 bp | AGAGTGGACATGCTCCTCTCTCGGAACGGCCGGGCCTaGCTGGCTTCATGGAAACTCGCTGTCCTCCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RVDMLLSRNGRA*LASWKLAVLLK Trigger: TTTCAGGAGGACAGCGAGTTTCCATGAAGCCAGGCAGGCCCGGCCGTTCCGAGAGAGGAGCATGTCCACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | CAGCTTCTTCCGGGCTTTCCAAATCTAAGGGAGCGCTaGGGGCCGCATCAATGGCAGTGTCTGTCAGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: QLLPGFPNLRER*GPHQWQCLSGD Trigger: GTCCCCTGACAGACACTGCCATTGATGCGGCCCCCAGCGCTCCCTTAGATTTGGAAAGCCCGGAAGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | CCTTTCCCCGGCACTGACCGCGGGCTGCTCCGGAAATaGGGATTTGATCCGGAACTTGTTTGCTGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PFPGTDRGLLRK*GFDPELVCCSF Trigger: GAAGCTGCAGCAAACAAGTTCCGGATCAAATCCCCATTTCCGGAGCAGCCCGCGGTCAGTGCCGGGGAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 90 bp | GGCCTTTCCCCGGCACTGACCGCGGGCTGCTCCGGAAATGGGGATTaGATCCGGAACTTGTTTGCTGCAGCTTCTTCCGGGCTTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GLSPALTAGCSGNGD*IRNLFAAASSGLSK Trigger: TTTGGAAAGCCCGGAAGAAGCTGCAGCAAACAAGTTCCGGATCAAATCCCCATTTCCGGAGCAGCCCGCGGTCAGTGCCGGGGAAAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | GAAGACAGTGACCACTCCTTGGACGAAGGTGCATGGTaGAGGCAGCACTGTCACCTCTACCCCGGACTCACA | + |
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Preference number: 6 (lower is better) Translates to: EDSDHSLDEGAW*RQHCHLYPGLT Trigger: TGTGAGTCCGGGGTAGAGGTGACAGTGCTGCCTCCACCATGCACCTTCGTCCAAGGAGTGGTCACTGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | TATCTGGGGGCCTCCTTGAAGACAGTGACCACTCCTTaGACGAAGGTGCATGGTGGAGGCAGCACTGTCACC | + |
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Preference number: 6 (lower is better) Translates to: YLGASLKTVTTP*TKVHGGGSTVT Trigger: GGTGACAGTGCTGCCTCCACCATGCACCTTCGTCCAAGGAGTGGTCACTGTCTTCAAGGAGGCCCCCAGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 72 bp | GTATCTGGGGGCCTCCTTGAAGACAGTGACCACTCCTaGGACGAAGGTGCATGGTGGAGGCAGCACTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: VSGGLLEDSDHS*DEGAWWRQHCH Trigger: GTGACAGTGCTGCCTCCACCATGCACCTTCGTCCAAGGAGTGGTCACTGTCTTCAAGGAGGCCCCCAGATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 90 bp | GCACTGACCGCGGGCTGCTCCGGAAATGGGGATTTGATCCGGAACTaGTTTGCTGCAGCTTCTTCCGGGCTTTCCAAATCTAAGGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: ALTAGCSGNGDLIRN*FAAASSGLSKSKGA Trigger: CGCTCCCTTAGATTTGGAAAGCCCGGAAGAAGCTGCAGCAAACAAGTTCCGGATCAAATCCCCATTTCCGGAGCAGCCCGCGGTCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | CTGAACAGAGGTGGGATTATCTTCTGGGCGTTGGACTaGAAGCTCTCGCTGCCAGAGGCATCATCCTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: LNRGGIIFWALD*KLSLPEASSSG Trigger: TCCCGAGGATGATGCCTCTGGCAGCGAGAGCTTCCAGTCCAACGCCCAGAAGATAATCCCACCTCTGTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 72 bp | ATCAGAGTCTGGCTGGGGCTTATGGCACAACTGGCCTaGGTCACATTTAGATCCAGCCTGGAGGGAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: IRVWLGLMAQLA*VTFRSSLEGGL Trigger: AAGGCCTCCCTCCAGGCTGGATCTAAATGTGACTCAGGCCAGTTGTGCCATAAGCCCCAGCCAGACTCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 72 bp | TCCAGTTTTTCAGGAAACAGGTGGGCACCTCGACTCTaGGGCCTAAATCTGTCCTCTGCCTGCTCGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSFSGNRWAPRL*GLNLSSACSQV Trigger: GACCTGCGAGCAGGCAGAGGACAGATTTAGGCCTCAGAGTCGAGGTGCCCACCTGTTTCCTGAAAAACTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | TTTCCAAATCTAAGGGAGCGCTGGGGGCCGCATCAATaGCAGTGTCTGTCAGGGGACTCTGAGACACGTGAT | + |
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Preference number: 6 (lower is better) Translates to: FPNLRERWGPHQ*QCLSGDSETRD Trigger: ATCACGTGTCTCAGAGTCCCCTGACAGACACTGCCATTGATGCGGCCCCCAGCGCTCCCTTAGATTTGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 90 bp | GGCTTCTGGCCCCAAGGGTGCACAGCCAAACTCAACCCACTGACCTaGAGCAAGTTCTGTCCTTTTGCTGGTTCTTATTTCCAGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GFWPQGCTAKLNPLT*SKFCPFAGSYFQRL Trigger: CAGCCGCTGGAAATAAGAACCAGCAAAAGGACAGAACTTGCTCAAGGTCAGTGGGTTGAGTTTGGCTGTGCACCCTTGGGGCCAGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | GACACCATCCCCACATGTGGCACTACACTGGCTCCATaGCTGCCACAGTCCCCAAGTTTCTGTATTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: DTIPTCGTTLAP*LPQSPSFCISL Trigger: CAGAGAAATACAGAAACTTGGGGACTGTGGCAGCCATGGAGCCAGTGTAGTGCCACATGTGGGGATGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000258613.5 |
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| CDS CAA 72 bp | GCGGGCTGCTCCGGAAATGGGGATTTGATCCGGAACTaGTTTGCTGCAGCTTCTTCCGGGCTTTCCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: AGCSGNGDLIRN*FAAASSGLSKS Trigger: AGATTTGGAAAGCCCGGAAGAAGCTGCAGCAAACAAGTTCCGGATCAAATCCCCATTTCCGGAGCAGCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 72 bp | ATGTTGGGCTTGTCCACAGGAAACGGGCACAGTGGTTaGCTGGTAAATAGGCCCACTTGGAAGGTGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: MLGLSTGNGHSG*LVNRPTWKVPS Trigger: AGAAGGCACCTTCCAAGTGGGCCTATTTACCAGTCAACCACTGTGCCCGTTTCCTGTGGACAAGCCCAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 72 bp | TCATCTCCTTTAACTGCTGCTGGGCAAGGCGGTAGCTaGACAGAGGTGGGATTATCTTCTGGGCGTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: SSPLTAAGQGGS*TEVGLSSGRWT Trigger: AGTCCAACGCCCAGAAGATAATCCCACCTCTGTTCAGCTACCGCCTTGCCCAGCAGCAGTTAAAGGAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 72 bp | GAGGCAGCACTGTCACCTCTACCCCGGACTCACATGTaGGTTCTGGCACCATCACCAGTTTGTATCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: EAALSPLPRTHM*VLAPSPVCIQI Trigger: AATTTGGATACAAACTGGTGATGGTGCCAGAACTCACATGTGAGTCCGGGGTAGAGGTGACAGTGCTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | CACTGTCACCTCTACCCCGGACTCACATGTGAGTTCTaGCACCATCACCAGTTTGTATCCAAATTTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: HCHLYPGLTCEF*HHHQFVSKFLG Trigger: GCCCAGAAATTTGGATACAAACTGGTGATGGTGCCAGAACTCACATGTGAGTCCGGGGTAGAGGTGACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 72 bp | GACTGGTTGGTCAGGAGGTACTTGGTAGTTACAGTCTaGTTGGTGTTGGCCTCCAACAGCAGGACAGATACA | + |
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Preference number: 6 (lower is better) Translates to: DWLVRRYLVVTV*LVLASNSRTDT Trigger: TGTATCTGTCCTGCTGTTGGAGGCCAACACCAATCAGACTGTAACTACCAAGTACCTCCTGACCAACCAGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS TCA 72 bp | CCTTCTGCTGCCTTGGCACTCCTATTCAAGTCAACGTaGAAGACAGGCCATTCCACCTTCAGAAAGGCACTT | + |
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Preference number: 6 (lower is better) Translates to: PSAALALLFKST*KTGHSTFRKAL Trigger: AAGTGCCTTTCTGAAGGTGGAATGGCCTGTCTTTCACGTTGACTTGAATAGGAGTGCCAAGGCAGCAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 72 bp | TTTAATGGACCACGGGTTCCACTTGCCTCTTGGAAATaGTCCAGTTTTTCAGGAAACAGGTGGGCACCTCGA | + |
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Preference number: 6 (lower is better) Translates to: FNGPRVPLASWK*SSFSGNRWAPR Trigger: TCGAGGTGCCCACCTGTTTCCTGAAAAACTGGAGCATTTCCAAGAGGCAAGTGGAACCCGTGGTCCATTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | AGAGGGTTTAATGGACCACGGGTTCCACTTGCCTCTTaGAAATGCTCCAGTTTTTCAGGAAACAGGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RGFNGPRVPLAS*KCSSFSGNRWA Trigger: TGCCCACCTGTTTCCTGAAAAACTGGAGCATTTCCAAGAGGCAAGTGGAACCCGTGGTCCATTAAACCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 90 bp | ATTTCCAGCGGCTGTCTTGAATTTCTTCTTGCCTCAGGAAGACTGTaGGTGAAGATGACATCCACTACGATGTTGGGCTTGTCCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ISSGCLEFLLASGRL*VKMTSTTMLGLSTG Trigger: TCCTGTGGACAAGCCCAACATCGTAGTGGATGTCATCTTCACCAACAGTCTTCCTGAGGCAAGAAGAAATTCAAGACAGCCGCTGGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS GCA 72 bp | ACTCAACCCACTGACCTTGAGCAAGTTCTGTCCTTTTaGTGGTTCTTATTTCCAGCGGCTGTCTTGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: TQPTDLEQVLSF*WFLFPAAVLNF Trigger: GAAATTCAAGACAGCCGCTGGAAATAAGAACCAGCAAAAGGACAGAACTTGCTCAAGGTCAGTGGGTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | AAATCCACATACACTGTGTCGTTGCTTAGTGCTACATaGCCTGGCTCTCTCAAGAGAAGATATTCAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: KSTYTVSLLSAT*PGSLKRRYSAS Trigger: AGAAGCTGAATATCTTCTCTTGAGAGAGCCAGGCCATGTAGCACTAAGCAACGACACAGTGTATGTGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 90 bp | CCATTAGCACCATCAAAATACTGGAAATCCACATACACTGTGTCGTaGCTTAGTGCTACATGGCCTGGCTCTCTCAAGAGAAGATATTCA | + |
|
Preference number: 6 (lower is better) Translates to: PLAPSKYWKSTYTVS*LSATWPGSLKRRYS Trigger: TGAATATCTTCTCTTGAGAGAGCCAGGCCATGTAGCACTAAGCAACGACACAGTGTATGTGGATTTCCAGTATTTTGATGGTGCTAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CCA 72 bp | ACATTCCTCAGTGTCCCATTAGCACCATCAAAATACTaGAAATCCACATACACTGTGTCGTTGCTTAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TFLSVPLAPSKY*KSTYTVSLLSA Trigger: AGCACTAAGCAACGACACAGTGTATGTGGATTTCCAGTATTTTGATGGTGCTAATGGGACACTGAGGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258613.5 ENST00000349258.8 ENST00000648254.1 |
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| CDS CAA 90 bp | ATGGCTGGAAAGCTGTATTTCTCTGAATTAGCATGCACTCCTCCTTaGCAGAAAAATGGCTTCTGCTTGAAATGCCAAAGTCAAAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: MAGKLYFSELACTPP*QKNGFCLKCQSQSS Trigger: ACTGCTTTGACTTTGGCATTTCAAGCAGAAGCCATTTTTCTGCAAAGGAGGAGTGCATGCTAATTCAGAGAAATACAGCTTTCCAGCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000349258.8 ENST00000648254.1 |
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