Pregenerated sensors for THRIL (Homo sapiens)
Ensembl gene IDs: ENSG00000280634Ensembl transcript IDs: ENST00000627370.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTTTGAAGCTGCTGGGGATCACGACTGTCTCTGTGGCCCTTACCTaGCCACAGATGTACCCTGGCAACCCGCTCACAGTGCCCTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: ALKLLGITTVSVALT*PQMYPGNPLTVPCV Trigger: CACGCAGGGCACTGTGAGCGGGTTGCCAGGGTACATCTGTGGCCAGGTAAGGGCCACAGAGACAGTCGTGATCCCCAGCAGCTTCAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS GCA 90 bp | TGGCCCTTACCTGGCCACAGATGTACCCTGGCAACCCGCTCACAGTaGCCTGCGTGCAGGTTTATAGATAACCCCTGCCAGACCTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: WPLPGHRCTLATRSQ*PACRFIDNPCQTCY Trigger: GTAGCAGGTCTGGCAGGGGTTATCTATAAACCTGCACGCAGGGCACTGTGAGCGGGTTGCCAGGGTACATCTGTGGCCAGGTAAGGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS GCA 90 bp | CCTGGCCACAGATGTACCCTGGCAACCCGCTCACAGTGCCCTGCGTaGAGGTTTATAGATAACCCCTGCCAGACCTGCTACAACCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: PGHRCTLATRSQCPA*RFIDNPCQTCYNQD Trigger: GTCTTGGTTGTAGCAGGTCTGGCAGGGGTTATCTATAAACCTGCACGCAGGGCACTGTGAGCGGGTTGCCAGGGTACATCTGTGGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS TCA 90 bp | CACATGATGGGACCCAAACTCTCCTGGAGAGTTCCATTCACTTCCTaGAACGTGCACCTGTTTCAGGTGCATGTTTATTCAGTGTGCATG | + |
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Preference number: 5 (lower is better) Translates to: HMMGPKLSWRVPFTS*NVHLFQVHVYSVCM Trigger: CATGCACACTGAATAAACATGCACCTGAAACAGGTGCACGTTTCAGGAAGTGAATGGAACTCTCCAGGAGAGTTTGGGTCCCATCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS GCA 90 bp | TCCTGGGGATTTGATGCCAGGAAGTACCTGGTAAGGATTGGAGATTaGTCCAGAATCTACTGCATGTCCCAATTTGCAGTTTGCTCACTA | + |
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Preference number: 5 (lower is better) Translates to: SWGFDARKYLVRIGD*SRIYCMSQFAVCSL Trigger: TAGTGAGCAAACTGCAAATTGGGACATGCAGTAGATTCTGGAGCAATCTCCAATCCTTACCAGGTACTTCCTGGCATCAAATCCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS GCA 90 bp | TGGGACCCAAACTCTCCTGGAGAGTTCCATTCACTTCCTGAAACGTaGACCTGTTTCAGGTGCATGTTTATTCAGTGTGCATGGATATTT | + |
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Preference number: 5 (lower is better) Translates to: WDPNSPGEFHSLPET*TCFRCMFIQCAWIF Trigger: AAATATCCATGCACACTGAATAAACATGCACCTGAAACAGGTGCACGTTTCAGGAAGTGAATGGAACTCTCCAGGAGAGTTTGGGTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS TCA 90 bp | TGGATGTTGTTGAGACTTTTGAGACTTCTGTTTCTAAGGTACACATaGTGGGACCCAAACTCTCCTGGAGAGTTCCATTCACTTCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: WMLLRLLRLLFLRYT*WDPNSPGEFHSLPE Trigger: TTCAGGAAGTGAATGGAACTCTCCAGGAGAGTTTGGGTCCCATCATGTGTACCTTAGAAACAGAAGTCTCAAAAGTCTCAACAACATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS GCA 72 bp | CCTGGCCACAGATGTACCCTGGCAACCCGCTCACAGTaGCCTGCGTGCAGGTTTATAGATAACCCCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGHRCTLATRSQ*PACRFIDNPCQ Trigger: CTGGCAGGGGTTATCTATAAACCTGCACGCAGGGCACTGTGAGCGGGTTGCCAGGGTACATCTGTGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS GCA 72 bp | AGATGTACCCTGGCAACCCGCTCACAGTGCCCTGCGTaGAGGTTTATAGATAACCCCTGCCAGACCTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: RCTLATRSQCPA*RFIDNPCQTCY Trigger: GTAGCAGGTCTGGCAGGGGTTATCTATAAACCTGCACGCAGGGCACTGTGAGCGGGTTGCCAGGGTACATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS GCA 72 bp | TACCTGGTAAGGATTGGAGATTGCTCCAGAATCTACTaGATGTCCCAATTTGCAGTTTGCTCACTAGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: YLVRIGDCSRIY*MSQFAVCSLGL Trigger: TAGCCCTAGTGAGCAAACTGCAAATTGGGACATGCAGTAGATTCTGGAGCAATCTCCAATCCTTACCAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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| CDS GCA 72 bp | TGGAGATTGCTCCAGAATCTACTGCATGTCCCAATTTaGAGTTTGCTCACTAGGGCTATATACAAAAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: WRLLQNLLHVPI*SLLTRAIYKSY Trigger: ATAGCTTTTGTATATAGCCCTAGTGAGCAAACTGCAAATTGGGACATGCAGTAGATTCTGGAGCAATCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627370.1 |
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