Pregenerated sensors for THRB-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000224822

Ensembl transcript IDs: ENST00000425296.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CATGTGCAGAACGTGCAGTTTTGTTACATAGGTATGCACATGCCATaGTCGTTTGCTGCACCCATCAACCTGTCACCTACATTAGGTATT	+
Preference number: 5 (lower is better) Translates to: HVQNVQFCYIGMHMP*SFAAPINLSPTLGI Trigger: AATACCTAATGTAGGTGACAGGTTGATGGGTGCAGCAAACGACCATGGCATGTGCATACCTATGTAACAAAACTGCACGTTCTGCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425296.1
CDS CCA 90 bp	AACACTTACACCAATCACCTCCATTACTCAGCTCCTAAGCAGAGATaGAAGCCTCCTAGGTGGAATGTTGAATTTGATTTTGAATTCTCT	+
Preference number: 5 (lower is better) Translates to: NTYTNHLHYSAPKQR*KPPRWNVEFDFEFS Trigger: AGAGAATTCAAAATCAAATTCAACATTCCACCTAGGAGGCTTCCATCTCTGCTTAGGAGCTGAGTAATGGAGGTGATTGGTGTAAGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425296.1
CDS CCA 90 bp	TGCCACATTTTCTTTATCCACTCTATCATTGATGGACATTTCGGTTaGTTCCAAGTCTTTGCTATTGCGAGTAGTGCTGCAATGAACATA	+
Preference number: 5 (lower is better) Translates to: CHIFFIHSIIDGHFG*FQVFAIASSAAMNI Trigger: TATGTTCATTGCAGCACTACTCGCAATAGCAAAGACTTGGAACCAACCGAAATGTCCATCAATGATAGAGTGGATAAAGAAAATGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425296.1
CDS CCA 72 bp	AACGTGCAGTTTTGTTACATAGGTATGCACATGCCATaGTCGTTTGCTGCACCCATCAACCTGTCACCTACA	+
Preference number: 6 (lower is better) Translates to: NVQFCYIGMHMP*SFAAPINLSPT Trigger: TGTAGGTGACAGGTTGATGGGTGCAGCAAACGACCATGGCATGTGCATACCTATGTAACAAAACTGCACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425296.1
CDS TCA 72 bp	TCCCTCCCCTACAGTGCAGCAAATGTATCAGCAACCTaGAGGAAAGAATGTTCCTCCATGAACATCCAACTT	+
Preference number: 6 (lower is better) Translates to: SLPYSAANVSAT*RKECSSMNIQL Trigger: AAGTTGGATGTTCATGGAGGAACATTCTTTCCTTCAGGTTGCTGATACATTTGCTGCACTGTAGGGGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425296.1
CDS CCA 72 bp	ACCAATCACCTCCATTACTCAGCTCCTAAGCAGAGATaGAAGCCTCCTAGGTGGAATGTTGAATTTGATTTT	+
Preference number: 6 (lower is better) Translates to: TNHLHYSAPKQR*KPPRWNVEFDF Trigger: AAAATCAAATTCAACATTCCACCTAGGAGGCTTCCATCTCTGCTTAGGAGCTGAGTAATGGAGGTGATTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425296.1
CDS CAA 72 bp	GAAGGAGCTTTGAAGAATACCCCATTTGCAACATCATaGCCTCTCAACCAGTTAAACATTTTCGATTCTTTC	+
Preference number: 6 (lower is better) Translates to: EGALKNTPFATS*PLNQLNIFDSF Trigger: GAAAGAATCGAAAATGTTTAACTGGTTGAGAGGCAATGATGTTGCAAATGGGGTATTCTTCAAAGCTCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425296.1