RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THPO (Homo sapiens)

Ensembl gene IDs: ENSG00000090534

Ensembl transcript IDs: ENST00000421442.2, ENST00000445696.6, ENST00000477594.1, ENST00000645603.2, ENST00000647395.1, ENST00000648612.1, ENST00000649095.1, ENST00000650229.1

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAATGCTaGTGTCGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATT +
Preference number: 1 (lower is better)
Translates to: PRGALQGRELYTRQC*CRQCLRTLPFLRQI
Trigger: AATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCGACATCAGCATTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421442.2
3UTR CCA 90 bp AGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGGTCCTGCCCTGTGGAGGAAGCTGAG +
Preference number: 1 (lower is better)
Translates to: SPFLGAGVGSSGRWH*DPCELWSCPVEEAE
Trigger: CTCAGCTTCCTCCACAGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
3UTR CCA 90 bp TCCAGAAGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATaGCATTGGGATCCTTGTGAGCTGTGGTCCTGCCCTGTGGAGGAA +
Preference number: 1 (lower is better)
Translates to: SRSPFLGAGVGSSGR*HWDPCELWSCPVEE
Trigger: TTCCTCCACAGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
3UTR TCA 90 bp GAATCCCTGCTGCCACTTCAGAAGCCCAGAGCCAGTAGTTCTGGCTaGGGCAGTGAAGTTTGTCTCCAACAATCCAGAAGTCCTTTCCTC +
Preference number: 1 (lower is better)
Translates to: ESLLPLQKPRASSSG*GSEVCLQQSRSPFL
Trigger: GAGGAAAGGACTTCTGGATTGTTGGAGACAAACTTCACTGCCTCAGCCAGAACTACTGGCTCTGGGCTTCTGAAGTGGCAGCAGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
3UTR CCA 90 bp GAGAAAGCTTATTCATTTCTCAAGAGTAAAGATCTGTTAAGAATATaGGATCAGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGC +
Preference number: 1 (lower is better)
Translates to: EKAYSFLKSKDLLRI*DQSPTENDSKGDGG
Trigger: GCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTTGAGAAATGAATAAGCTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
3UTR-3UTR TCA 90 bp GAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTGGGATCCTTGTGAGCTGTGGTGGCAGAGGATGGTCCTaGGGCCAAACACCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: EQVLEAQEDGIGILVSCGGRGWS*GQTPGP
Trigger: TGGCCCTGGTGTTTGGCCTCAGGACCATCCTCTGCC...ACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
3UTR-3UTR TCA 90 bp TCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTGGGATCCTTGCCCTGTGGAGGAAGCTaGGGGCAGAGGATGGTCCTG +
Preference number: 2 (lower is better)
Translates to: SFPRSRCWKLRKMALGSLPCGGS*GQRMVL
Trigger: CAGGACCATCCTCTGCCCTCAGCTTCCTCCACAGGG...CAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477594.1
3UTR CAA 90 bp TACCAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTaGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGA +
Preference number: 2 (lower is better)
Translates to: YQGFGFQEKVGNLVQ*SPRGALQGRELYTR
Trigger: TCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
3UTR-3UTR GCA 90 bp CAACAATCCAGAAGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGTGTGAGCTGTGGTCCTaGCCTGTGGAGGAAGCTGAG +
Preference number: 2 (lower is better)
Translates to: QQSRSPFLGAGVGSSGRWCELWS*PVEEAE
Trigger: CTCAGCTTCCTCCACAGGGCAGGACCACAGCTCACA...CCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGGATTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
3UTR-3UTR CCA 90 bp CCAACAATCCAGAAGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGATCCTTGTGAGCTGTaGTCCTGCCCTGTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: PTIQKSFPRSRCWKLRKMDPCEL*SCPVEE
Trigger: TTCCTCCACAGGGCAGGACCACAGCTCACAAGGATC...CATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGGATTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
3UTR-3UTR GCA 90 bp CGGCGCTCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACCTCCCTCTGTTCAACTaGCAGGCCAGCCCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: RRSHLFLIQAQFCLVYRDLPLFN*QASPGL
Trigger: AAGGCCTGGGCTGGCCTGGCAGTTGAACAGAGGGAG...GTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGAGCGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
3UTR CAA 90 bp AGGTTAGTCTCTCCCTCTGTTCAACTGCCAGGCCAGCCCAGGCCTTaGCAGAGTTATCACAGAAAAAGAGCATGTAGAGAATCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: RLVSPSVQLPGQPRP*QSYHRKRACRESVS
Trigger: ACTCACTGATTCTCTACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTTGAACAGAGGGAGAGACTAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
3UTR-3UTR CCA 90 bp ACCCTTTCTCTGTTTTCTGACTCAAGGTTAGTCTCTCCCTCTGTTCAACTGCCACTTTTACCAGGGCTTTaGGTTTCAGGAGAAAGTAGG +
Preference number: 2 (lower is better)
Translates to: TLSLFSDSRLVSPSVQLPLLPGL*VSGESR
Trigger: CCTACTTTCTCCTGAAACCCAAAGCCCTGGTAAAAG...TGGCAGTTGAACAGAGGGAGAGACTAACCTTGAGTCAGAAAACAGAGAAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
3UTR-3UTR TCA 90 bp TCATTTCTCAAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGCATGTAGAGAATCAGTaGGTTGCAAATTTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: SFLKSKDLLRIWDQSPTEHVENQ*VANFCR
Trigger: TCTGCAGAAATTTGCAACTCACTGATTCTCTACATG...CTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTTGAGAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
3UTR CCA 72 bp CTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGGTCCTGCCCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: LGAGVGSSGRWH*DPCELWSCPVE
Trigger: CTCCACAGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
3UTR CCA 72 bp CCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATaGCATTGGGATCCTTGTGAGCTGTGGTCCTGCCCT +
Preference number: 3 (lower is better)
Translates to: PFLGAGVGSSGR*HWDPCELWSCP
Trigger: AGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
3UTR-3UTR CAA 90 bp AACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTAGGAAATCTTGTCCAGTaGTCTCCCAGGGGCGCCCTG +
Preference number: 3 (lower is better)
Translates to: NCQASPGLCRVITEKEHVGNLVQ*SPRGAL
Trigger: CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC...TACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
3UTR-3UTR CAA 90 bp TCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTGGAAATCTTGTCCAGTaGTCTCCCAGGGGCGCCCTG +
Preference number: 3 (lower is better)
Translates to: SHLFLIQAQFCLVYRDSIGNLVQ*SPRGAL
Trigger: CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC...AATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
3UTR-3UTR CAA 90 bp TTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGAAGGGGATGGGGGCGTaGGAAGGCCTTGAATTTGAA +
Preference number: 3 (lower is better)
Translates to: LFLIQAQFCLVYRDSISEKGMGA*EGLEFE
Trigger: TTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTT...CTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACTGGGTGGGGCCCGCCTaGCGCAGAGGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: GNLVQLSPRGALQGRELYWVGPA*RRGWTL
Trigger: GAGGGTCCACCCTCTGCGTCAGGCGGGCCCCACCCA...GTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACCTGCCCCAGGAGGGATaGGAGGCAAGTGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GNLVQLSPRGALQGRELYLPQEG*EASGSQ
Trigger: CTGGGACCCACTTGCCTCTCATCCCTCCTGGGGCAG...GTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACCTGCCCCAGGAGGGATaGGAGGCAAGTGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHLPQEG*EASGSQ
Trigger: CTGGGACCCACTTGCCTCTCATCCCTCCTGGGGCAG...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAATCCCAGTTGTCCCCGTaGTGCCATCACTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQSQLSP*CHHSLQ
Trigger: CTGGAGGGAGTGATGGCAGCACGGGGACAACTGGGA...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp AGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACTCCCAGGGGCGCCCTaGAGGGAAGGGAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: RKSCPVVSQGRPAGKGAVLPGAP*REGSCT
Trigger: TGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAG...TACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAGACAGCTGTGGTGGGTaGGGCCCGCCTGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGDSCGG*GPPDAE
Trigger: CTCTGCGTCAGGCGGGCCCCACCCACCACAGCTGTC...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp GGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACCAGTTGTCCCCGTGCTaGCATCACTCCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GNLVQLSPRGALQGRELYQLSPC*HHSLQQ
Trigger: CTGCTGGAGGGAGTGATGGCAGCACGGGGACAACTG...GTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp GGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACTGTGAGCTGTGGTCCTaGCCTGTGGAGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GNLVQLSPRGALQGRELYCELWS*PVEEAG
Trigger: CCCAGCTTCCTCCACAGGGCAGGACCACAGCTCACA...GTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421442.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAAGGCGGCTTAGGCTCTTaGACTTCTGGGCAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQGGLGS*TSGQSR
Trigger: CCTACTCTGCCCAGAAGTGCAAGAGCCTAAGCCGCC...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAAGGACTAGAGAGGTTCTaGTGGGGACAGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQGLERF*WGQLWW
Trigger: CCACCACAGCTGTCCCCAGCAGAACCTCTCTAGTCC...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACCAGGAGGAGCCGGGCTaGACAGCGTTAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHQEEPG*TALALQ
Trigger: CTGCAAGGCTAACGCTGTCCAGCCCGGCTCCTCCTG...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGCTGGGCAGAGTAGGGTaGGGCAAAGGCGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGLGRVG*GKGGPR
Trigger: CCTTGGCCCGCCTTTGCCCCACCCTACTCTGCCCAG...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGGTGTCTGGCTGGCGTaGCTCCCTGTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EKVGNLVQLSPRGALQGRGVWLA*LPVWGL
Trigger: GAGGCCCCAAACAGGGAGCCACGCCAGCCAGACACC...CCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGATCTGGCCGGGGTGTCTaGCTGGCGTGGCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: ESRKSCPVVSQGRPAGKGSGRGV*LAWLPV
Trigger: AACAGGGAGCCACGCCAGCCAGACACCCCGGCCAGA...TCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAACTAGAGAGGTTCTGCTaGGGACAGCTGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQLERFC*GQLWWV
Trigger: CACCCACCACAGCTGTCCCCAGCAGAACCTCTCTAG...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAACCTCTGGGGAGCAGATaGGTAGGAAGACATGTGGCG +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQPLGSR*VGRHVA
Trigger: CGCCACATGTCTTCCTACCCATCTGCTCCCCAGAGG...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp AGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTAGTTCCAAGGAGGCTCTaGAGGGCCCCAAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RKSCPVVSQGRPAGKGAVVPRRL*RAPRRR
Trigger: TCTCCTCCTTGGGGCCCTGCAGAGCCTCCTTGGAAC...TACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp GGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACGGCGGCTTAGGCTCTTaGACTTCTGGGCAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GNLVQLSPRGALQGRELYGGLGS*TSGQSR
Trigger: CCTACTCTGCCCAGAAGTGCAAGAGCCTAAGCCGCC...GTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACCTCCCTCTGTTCAACTaGCAGGCCAGCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHLPLFN*QASPGL
Trigger: AAGGCCTGGGCTGGCCTGGCAGTTGAACAGAGGGAG...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGCAGGAGGAGCCGGGCTaGACAGCGTTAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGQEEPG*TALALQ
Trigger: CTGCAAGGCTAACGCTGTCCAGCCCGGCTCCTCCTG...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAAAGGTATCCGGGGATTTaGTCCAGGGACCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQRYPGI*SRDLEV
Trigger: AACCTCCAGGTCCCTGGACCAAATCCCCGGATACCT...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACGGAGAATATCCAGGCTaGAGGTTGGGTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GNLVQLSPRGALQGRELYGEYPG*RLGGRE
Trigger: CTCCCTGCCACCCAACCTCCAGCCTGGATATTCTCC...GTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGGTAGGGGTGGGCGTTaGAGCAGAAGGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SRKSCPVVSQGRPAGKGAGRGGR*SRRVRK
Trigger: CTTCCTGACCCTTCTGCTCCAACGCCCACCCCTACC...AGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGGTAGGGGTGGGCGTTaGAGCAGAAGGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHGRGGR*SRRVRK
Trigger: CTTCCTGACCCTTCTGCTCCAACGCCCACCCCTACC...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTCCCCTGAATCCTTCCTaGGGCCATGGAGGCGGCTTA +
Preference number: 4 (lower is better)
Translates to: SRKSCPVVSQGRPAGKGAPLNPS*GHGGGL
Trigger: TAAGCCGCCTCCATGGCCCCAGGAAGGATTCAGGGG...AGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGACGCCTTCTCTTCCCTaGAGCCCCTGCCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGTPSLP*SPCLDQ
Trigger: CTGGTCCAGGCAGGGGCTCCAGGGAAGAGAAGGCGT...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS-3UTR TCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAACAGGAATCTTGGCTCTaGATCCCTGCTGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQQESWL*IPAATS
Trigger: TGAAGTGGCAGCAGGGATTCAGAGCCAAGATTCCTG...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCATTGGGATCCTTGTaGGCTGTGGTCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ESRKSCPVVSQGRPAGKGALGSL*AVVLPW
Trigger: CCAGGGCAGGACCACAGCTCACAAGGATCCCAATGC...TCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445696.6
CDS-3UTR GCA 90 bp GAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGACAGTTGTCCCCGTGCTaGCATCACTCCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ESRKSCPVVSQGRPAGKGQLSPC*HHSLQQ
Trigger: CTGCTGGAGGGAGTGATGGCAGCACGGGGACAACTG...TCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGATCCCAGTTGTCCCCGTaGTGCCATCACTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGSQLSP*CHHSLQ
Trigger: CTGGAGGGAGTGATGGCAGCACGGGGACAACTGGGA...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGATGTGAGCTGTGGTCCTaGCCTGTGGAGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGCELWS*PVEEAG
Trigger: CCCAGCTTCCTCCACAGGGCAGGACCACAGCTCACA...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421442.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAGGGCTCCTAGGGTCCTaGGTGAGGGTCCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGGLLGS*VRVQER
Trigger: TCTTTCCTGGACCCTCACGCAGGACCCTAGGAGCCC...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp ATGTCGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGCTCCCAGGGGCGCCCTaGAGGGAAGGGAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: MSAVSENLTLPETDSGSGLPGAP*REGSCT
Trigger: TGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAG...CCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR GCA 90 bp GAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAAGCAGGTCATACGCCTaGCTGGGCCACTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ESRKSCPVVSQGRPAGKGSRSYA*LGHFCP
Trigger: TGGGCAGAAGTGGCCCAGGCAGGCGTATGACCTGCT...TCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS-3UTR CCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACTGTGGTCCTGCCCTGTaGAGGAAGCTGGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHCGPAL*RKLGSK
Trigger: CTTGGAACCCAGCTTCCTCCACAGGGCAGGACCACA...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421442.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAATTTGGTCCAGGGACCTaGAGGTTTGGTTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQFGPGT*RFGSAD
Trigger: GTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAA...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGATCCAGGCTGGAGGTTaGGTGGCAGGGAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: EKVGNLVQLSPRGALQGRIQAGG*VAGSLC
Trigger: ACACAGGCTCCCTGCCACCCAACCTCCAGCCTGGAT...CCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACAAGAATCTATCCGGGTaGAGAAGGGCTCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GNLVQLSPRGALQGRELYKNLSG*RRAPGP
Trigger: GGGTCCTGGAGCCCTTCTCCACCCGGATAGATTCTT...GTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCGCCGGGGTGTCTGGCTaGCGTGGCTCCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FGFQEKVGNLVQLSPRGAAGVSG*RGSLFG
Trigger: CCCAAACAGGGAGCCACGCCAGCCAGACACCCCGGC...GGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAAGCCGGGGTGTCTGGCTaGCGTGGCTCCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: RVPLRMIVKGMGALEGLEAGVSG*RGSLFG
Trigger: CCCAAACAGGGAGCCACGCCAGCCAGACACCCCGGC...TTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTTCAACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCAGCCGGGGTGTCTGGCTaGCGTGGCTCCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VQLPGQPRPLQSYHRKRAAGVSG*RGSLFG
Trigger: CCCAAACAGGGAGCCACGCCAGCCAGACACCCCGGC...TGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACCTAGAGAGGTTCTGCTaGGGACAGCTGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHLERFC*GQLWWV
Trigger: CACCCACCACAGCTGTCCCCAGCAGAACCTCTCTAG...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGGCATTGGGATCCTTGTaGGCTGTGGTCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGALGSL*AVVLPC
Trigger: ACAGGGCAGGACCACAGCTCACAAGGATCCCAATGC...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421442.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGGAGCTCGTTCAGTGTaGGGACTAGAGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHGARSV*GLERFC
Trigger: GCAGAACCTCTCTAGTCCTCACACTGAACGAGCTCC...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp GGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGGTTCCAAGGAGGCTCTaGAGGGCCCCAAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GFQEKVGNLVQLSPRGALVPRRL*RAPRRR
Trigger: TCTCCTCCTTGGGGCCCTGCAGAGCCTCCTTGGAAC...CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTCCCAGGGGCGCCCTaGAGGGAAGGGAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: FGFQEKVGNLVQLSPRGALPGAP*REGSCT
Trigger: TGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAG...GGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGGGCGGCTTAGGCTCTTaGACTTCTGGGCAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGGGLGS*TSGQSR
Trigger: CCTACTCTGCCCAGAAGTGCAAGAGCCTAAGCCGCC...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCACAGGAGGAGCCGGGCTaGACAGCGTTAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VSGESRKSCPVVSQGRPAQEEPG*TALALQ
Trigger: CTGCAAGGCTAACGCTGTCCAGCCCGGCTCCTCCTG...TGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACCTCGGAGCAGGTGTTaGAAGCTCAGGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: RKSCPVVSQGRPAGKGAVPRSRC*KLRKMA
Trigger: TGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGG...TACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACCCTCGGAGCAGGTGTTaGAAGCTCAGGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHPRSRC*KLRKMA
Trigger: TGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGG...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGGTGGGCAAGGTGGGTaGAAGAGGGAAGAGCGTATA +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHGGQGG*KREERI
Trigger: TATACGCTCTTCCCTCTTCCACCCACCTTGCCCACC...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTAGGTGGGCAAGGTGGGTaGAAGAGGGAAGAGCGTATA +
Preference number: 4 (lower is better)
Translates to: RKSCPVVSQGRPAGKGAVGGQGG*KREERI
Trigger: TATACGCTCTTCCCTCTTCCACCCACCTTGCCCACC...TACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGGTGGGCAAGGTGGGTaGAAGAGGGAAGAGCGTATA +
Preference number: 4 (lower is better)
Translates to: SRKSCPVVSQGRPAGKGAGGQGG*KREERI
Trigger: TATACGCTCTTCCCTCTTCCACCCACCTTGCCCACC...AGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCGGTGTCTGGCTGGCGTaGCTCCCTGTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRGVWLA*LPVWGL
Trigger: GAGGCCCCAAACAGGGAGCCACGCCAGCCAGACACC...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTAGATCCTTGTGAGCTGTaGTCCTGCCCTGGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: RKSCPVVSQGRPAGKGAVDPCEL*SCPGFQ
Trigger: TTGGAACCCAGGGCAGGACCACAGCTCACAAGGATC...TACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445696.6
CDS-3UTR CCA 90 bp CAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGACAGCTGTGGTGGGTaGGGCCCGCCTGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGFGFQEKVGNLVQLSPRDSCGG*GPPDAE
Trigger: CTCTGCGTCAGGCGGGCCCCACCCACCACAGCTGTC...CCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CCAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGACAGCTGTGGTGGGTaGGGCCCGCCTGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGLWVSGESRKSCPVVSQDSCGG*GPPDAE
Trigger: CTCTGCGTCAGGCGGGCCCCACCCACCACAGCTGTC...CTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAATCCAGAAGTCCTGTTTaGGAGCTCGTTCAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQSRSPV*ELVQCE
Trigger: CTCACACTGAACGAGCTCCCAAACAGGACTTCTGGA...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GGTGTTGGAAGCTCAGGAAGATGGCATTGGGATCCTTGTGAGCTGTGGTCCTGCCAGGCCTCCCTTGTCTaGGTTCCAAGGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GVGSSGRWHWDPCELWSCQASLV*VPRRLC
Trigger: GCAGAGCCTCCTTGGAACCCAGACAAGGGAGGCCTG...GCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR CCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGGGTCATACGCCTGCCTaGGCCACTTCTGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGGHTPA*ATSAQS
Trigger: TGATTGGGCAGAAGTGGCCCAGGCAGGCGTATGACC...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS-3UTR TCA 90 bp AGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTCACGAAGCAGTTTACTaGGGACTCGGAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: SRKSCPVVSQGRPAGKGAHEAVY*GLGGHK
Trigger: CTTGTGACCTCCGAGTCCTCAGTAAACTGCTTCGTG...AGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp AACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTACTGCCCCAGGAGGGATaGGAGGCAAGTGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: NCQASPGLCRVITEKEHVLPQEG*EASGSQ
Trigger: CTGGGACCCACTTGCCTCTCATCCCTCCTGGGGCAG...TACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGCCAGTAGTTCTGGCTaGGGCAGTGAAGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHASSSG*GSEVCL
Trigger: GAGACAAACTTCACTGCCTCAGCCAGAACTACTGGC...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGAAGGCGGGCCAAGGGTaGAGAATCTATCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GFQEKVGNLVQLSPRGALKAGQG*RIYPGG
Trigger: TCCACCCGGATAGATTCTTCACCCTTGGCCCGCCTT...CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp CCAACAATCCAGAAGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGGCAGAGGATGGTCCTaGGGCCAAACACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PTIQKSFPRSRCWKLRKMGRGWS*GQTPGP
Trigger: TGGCCCTGGTGTTTGGCCTCAGGACCATCCTCTGCC...CATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGGATTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR TCA 90 bp CCAACAATCCAGAAGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGCCCTGTGGAGGAAGCTaGGGGCAGAGGATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PTIQKSFPRSRCWKLRKMPCGGS*GQRMVL
Trigger: CAGGACCATCCTCTGCCCTCAGCTTCCTCCACAGGG...CATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGGATTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR TCA 90 bp TTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCGAAGGCCCCCGGAAGTaGCGCCTTCTCTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: FGFQEKVGNLVQLSPRGAEGPRK*RLLFPG
Trigger: TCCAGGGAAGAGAAGGCGTCACTTCCGGGGGCCTTC...GGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS-3UTR GCA 90 bp GATCAGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGTGAGCTGTGGTCCTaGCCTGTGGAGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DQSPTENDSKGDGGVGRPCELWS*PVEEAG
Trigger: CCCAGCTTCCTCCACAGGGCAGGACCACAGCTCACA...AGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAGCTCTGAATCCCTGCTaGCACTTCAGAAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGALNPC*HFRSPE
Trigger: CTCTGGGCTTCTGAAGTGGCAGCAGGGATTCAGAGC...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TGTCGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTGGGATGAGAGGCAAGTaGGTCCCAGTTGTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: CRQCLRTLPFLRQILGVGGMRGK*VPVVPV
Trigger: CACGGGGACAACTGGGACCCACTTGCCTCTCATCCC...ACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CCA 90 bp GTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCACCCTGTGGAGGAAGCTaGGTTCCAAGGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSGESRKSCPVVSQGRPAPCGGS*VPRRLC
Trigger: GCAGAGCCTCCTTGGAACCCAGCTTCCTCCACAGGG...TGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421442.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAGATCCTTGTGAGCTGTaGTCCTGCCCTGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGDPCEL*SCPVEE
Trigger: TTCCTCCACAGGGCAGGACCACAGCTCACAAGGATC...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421442.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGTATCCGGGGATTTaGTCCAGGGACCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGRYPGI*SRDLEV
Trigger: AACCTCCAGGTCCCTGGACCAAATCCCCGGATACCT...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCACCCCTGAATCCTTCCTaGGGCCATGGAGGCGGCTTA +
Preference number: 4 (lower is better)
Translates to: VSGESRKSCPVVSQGRPAPLNPS*GHGGGL
Trigger: TAAGCCGCCTCCATGGCCCCAGGAAGGATTCAGGGG...TGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGTCTGGCCGGGGTGTCTaGCTGGCGTGGCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: QGFGFQEKVGNLVQLSPRSGRGV*LAWLPV
Trigger: AACAGGGAGCCACGCCAGCCAGACACCCCGGCCAGA...CCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACCAGTTAGGAGAAGCATaGCCACGAGGAGCAATTCAG +
Preference number: 4 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHQLGEA*PRGAIQ
Trigger: CTGAATTGCTCCTCGTGGTCATGCTTCTCCTAACTG...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp CTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAATTTGAAGCACTGCCCCAGGAGGGATaGGAGGCAAGTGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LRMIVKGMGALEGLEFEALPQEG*EASGSQ
Trigger: CTGGGACCCACTTGCCTCTCATCCCTCCTGGGGCAG...TGCTTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAGCCAGTAGTTCTGGCTaGGGCAGTGAAGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGASSSG*GSEVCL
Trigger: GAGACAAACTTCACTGCCTCAGCCAGAACTACTGGC...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp GTTCAACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCACAGTTGTCCCCGTGCTaGCATCACTCCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VQLPGQPRPLQSYHRKRAQLSPC*HHSLQQ
Trigger: CTGCTGGAGGGAGTGATGGCAGCACGGGGACAACTG...TGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TACCAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCCTCCCAGGGGCGCCCTaGAGGGAAGGGAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: YQGFGFQEKVGNLVQLSPLPGAP*REGSCT
Trigger: TGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAG...GGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTCCCTCTGTTCAACTaGCAGGCCAGCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FGFQEKVGNLVQLSPRGALPLFN*QASPGL
Trigger: AAGGCCTGGGCTGGCCTGGCAGTTGAACAGAGGGAG...GGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTACAGGAGGAGCCGGGCTaGACAGCGTTAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: NCQASPGLCRVITEKEHVQEEPG*TALALQ
Trigger: CTGCAAGGCTAACGCTGTCCAGCCCGGCTCCTCCTG...TACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTGGGATGAGAGGCAAGTaGGTCCCAGTTGTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: QLPGQPRPLQSYHRKRACGMRGK*VPVVPV
Trigger: CACGGGGACAACTGGGACCCACTTGCCTCTCATCCC...ACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAACCCTGTGGAGGAAGCTaGGTTCCAAGGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RVPLRMIVKGMGALEGLEPCGGS*VPRRLC
Trigger: GCAGAGCCTCCTTGGAACCCAGCTTCCTCCACAGGG...TTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTGTATGTGGTCCTGCCCTGTaGAGGAAGCTGGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RQCLRTLPFLRQILGVGVCGPAL*RKLGSK
Trigger: CTTGGAACCCAGCTTCCTCCACAGGGCAGGACCACA...TACACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CCA 90 bp GGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCCTCGGAGCAGGTGTTaGAAGCTCAGGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: GFQEKVGNLVQLSPRGALPRSRC*KLRKMA
Trigger: TGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGG...CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TTGGAAGCTCAGGAAGATGGCATTGGGATCCTTGTGAGCTGTGGTCCTGCCCTGCCTCGGAGCAGGTGTTaGAAGCTCAGGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: LEAQEDGIGILVSCGPALPRSRC*KLRKMA
Trigger: TGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGG...CAGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR CCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGACCTGGAGGTTTaGTTCAGCAGACCAGGAATC +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGRDLEV*FSRPGI
Trigger: GATTCCTGGTCTGCTGAACCAAACCTCCAGGTCCCT...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGAGGGACCTGGAGGTTTaGTTCAGCAGACCAGGAATC +
Preference number: 4 (lower is better)
Translates to: EKVGNLVQLSPRGALQGRRDLEV*FSRPGI
Trigger: GATTCCTGGTCTGCTGAACCAAACCTCCAGGTCCCT...CCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGATTTGGTCCAGGGACCTaGAGGTTTGGTTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGFGPGT*RFGSAD
Trigger: GTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAA...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGAGGTATCCGGGGATTTaGTCCAGGGACCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GFQEKVGNLVQLSPRGALRYPGI*SRDLEV
Trigger: AACCTCCAGGTCCCTGGACCAAATCCCCGGATACCT...CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCGGTAGGGGTGGGCGTTaGAGCAGAAGGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRGRGGR*SRRVRK
Trigger: CTTCCTGACCCTTCTGCTCCAACGCCCACCCCTACC...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAACCCCTGAATCCTTCCTaGGGCCATGGAGGCGGCTTA +
Preference number: 4 (lower is better)
Translates to: RVPLRMIVKGMGALEGLEPLNPS*GHGGGL
Trigger: TAAGCCGCCTCCATGGCCCCAGGAAGGATTCAGGGG...TTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTTCCAGAAGTCCTGTTTaGGAGCTCGTTCAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SRKSCPVVSQGRPAGKGASRSPV*ELVQCE
Trigger: CTCACACTGAACGAGCTCCCAAACAGGACTTCTGGA...AGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTAGAAGACATGTGGCGGTaGGGCACAGCCCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: NCQASPGLCRVITEKEHVEDMWR*GTAPPQ
Trigger: CTGTGGAGGGGCTGTGCCCCACCGCCACATGTCTTC...TACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
3UTR CAA 72 bp TTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTaGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FGFQEKVGNLVQ*SPRGALQGREL
Trigger: CAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGCAGTTAGGAGAAGCATaGCCACGAGGAGCAATTCAG +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGQLGEA*PRGAIQ
Trigger: CTGAATTGCTCCTCGTGGTCATGCTTCTCCTAACTG...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGCAGTTAGGAGAAGCATaGCCACGAGGAGCAATTCAG +
Preference number: 4 (lower is better)
Translates to: EKVGNLVQLSPRGALQGRQLGEA*PRGAIQ
Trigger: CTGAATTGCTCCTCGTGGTCATGCTTCTCCTAACTG...CCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GTACACGAGACAATGCTGATGTCGGCAGTGTCTGAGAACCTTACCCTTCCTGAGGCATTGGGATCCTTGTaGGCTGTGGTCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VHETMLMSAVSENLTLPEALGSL*AVVLPC
Trigger: ACAGGGCAGGACCACAGCTCACAAGGATCCCAATGC...CTCAGGAAGGGTAAGGTTCTCAGACACTGCCGACATCAGCATTGTCTCGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR TCA 90 bp TCTCCAACAATCCAGAAGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGGCATTGGGATCCTTGTaGGCTGTGGTCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SPTIQKSFPRSRCWKLRKALGSL*AVVLPC
Trigger: ACAGGGCAGGACCACAGCTCACAAGGATCCCAATGC...CTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGGATTGTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR TCA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCGCATTGGGATCCTTGTaGGCTGTGGTCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRALGSL*AVVLPC
Trigger: ACAGGGCAGGACCACAGCTCACAAGGATCCCAATGC...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421442.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp TTGGAAGCTCAGGAAGATGGCATTGGGATCCTTGTGAGCTGTGGTCCTGCCCTGGCCAGTAGTTCTGGCTaGGGCAGTGAAGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LEAQEDGIGILVSCGPALASSSG*GSEVCL
Trigger: GAGACAAACTTCACTGCCTCAGCCAGAACTACTGGC...CAGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR TCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGATACACGAGACAATGCTaGTGTCGGCAGTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGYTRQC*CRQCLR
Trigger: TCTCAGACACTGCCGACATCAGCATTGTCTCGTGTA...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGTACACGAGACAATGCTaGTGTCGGCAGTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGYTRQC*CRQCLR
Trigger: TCTCAGACACTGCCGACATCAGCATTGTCTCGTGTA...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GATCAGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTGGAGCTCGTTCAGTGTaGGGACTAGAGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: DQSPTENDSKGDGGVGRPGARSV*GLERFC
Trigger: GCAGAACCTCTCTAGTCCTCACACTGAACGAGCTCC...AGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCACCTGTCCAGAAAGCTaGCCCAGGAGGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: FGFQEKVGNLVQLSPRGATCPES*PRRDER
Trigger: CCTCTCATCCCTCCTGGGGCAGCTTTCTGGACAGGT...GGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp AGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAAACCTGTCCAGAAAGCTaGCCCAGGAGGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: RVPLRMIVKGMGALEGLETCPES*PRRDER
Trigger: CCTCTCATCCCTCCTGGGGCAGCTTTCTGGACAGGT...TTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTGTAGCTCTGAATCCCTGCTaGCACTTCAGAAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RQCLRTLPFLRQILGVGVALNPC*HFRSPE
Trigger: CTCTGGGCTTCTGAAGTGGCAGCAGGGATTCAGAGC...TACACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR GCA 90 bp TCTCCAACAATCCAGAAGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGTGTGAGCTGTGGTCCTaGCCTGTGGAGGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SPTIQKSFPRSRCWKLRKCELWS*PVEEAE
Trigger: CTCAGCTTCCTCCACAGGGCAGGACCACAGCTCACA...CTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGGATTGTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR CCA 90 bp CCAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGATGAGAGGCAAGTaGGTCCCAGTTGTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: PGLWVSGESRKSCPVVSQGMRGK*VPVVPV
Trigger: CACGGGGACAACTGGGACCCACTTGCCTCTCATCCC...CTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCTGTGGTCCTGCCCTGTaGAGGAAGCTGGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRCGPAL*RKLGSK
Trigger: CTTGGAACCCAGCTTCCTCCACAGGGCAGGACCACA...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421442.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp ATGTCGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGGATCCTTGTGAGCTGTaGTCCTGCCCTGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: MSAVSENLTLPETDSGSGDPCEL*SCPVEE
Trigger: TTCCTCCACAGGGCAGGACCACAGCTCACAAGGATC...CCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGSGRWH*DPCELW
Trigger: CCACAGCTCACAAGGATCCCAATGCCATCTTCCTGA...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTGTAGGATGTGTTATCCAGGCTGGAGGTTaGGTGGCAGGGAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRTLPFLRQILGVGVGCVIQAGG*VAGSLC
Trigger: ACACAGGCTCCCTGCCACCCAACCTCCAGCCTGGAT...AACACATCCTACACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CCA 90 bp AACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTAATCCAGGCTGGAGGTTaGGTGGCAGGGAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: NCQASPGLCRVITEKEHVIQAGG*VAGSLC
Trigger: ACACAGGCTCCCTGCCACCCAACCTCCAGCCTGGAT...TACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCGGAGAATATCCAGGCTaGAGGTTGGGTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FGFQEKVGNLVQLSPRGAGEYPG*RLGGRE
Trigger: CTCCCTGCCACCCAACCTCCAGCCTGGATATTCTCC...GGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAAGGAGAATATCCAGGCTaGAGGTTGGGTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RVPLRMIVKGMGALEGLEGEYPG*RLGGRE
Trigger: CTCCCTGCCACCCAACCTCCAGCCTGGATATTCTCC...TTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTTGTCCAGTAGGAGGATaGGTTGGGGAAGGAGAATAT +
Preference number: 4 (lower is better)
Translates to: SRKSCPVVSQGRPAGKGACPVGG*VGEGEY
Trigger: ATATTCTCCTTCCCCAACCCATCCTCCTACTGGACA...AGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTGTAGGTGGGCAAGGTGGGTaGAAGAGGGAAGAGCGTATA +
Preference number: 4 (lower is better)
Translates to: RQCLRTLPFLRQILGVGVGGQGG*KREERI
Trigger: TATACGCTCTTCCCTCTTCCACCCACCTTGCCCACC...TACACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CCA 90 bp TACCAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCCAGTCAGCTCCATTCTaGCCGGGGTGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: YQGFGFQEKVGNLVQLSPQSAPF*PGCLAG
Trigger: GCCAGCCAGACACCCCGGCCAGAATGGAGCTGACTG...GGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAATTTGAAGCACAGTCAGCTCCATTCTaGCCGGGGTGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LRMIVKGMGALEGLEFEAQSAPF*PGCLAG
Trigger: GCCAGCCAGACACCCCGGCCAGAATGGAGCTGACTG...TGCTTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTTCAACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCACCTCTGGGGAGCAGATaGGTAGGAAGACATGTGGCG +
Preference number: 4 (lower is better)
Translates to: VQLPGQPRPLQSYHRKRAPLGSR*VGRHVA
Trigger: CGCCACATGTCTTCCTACCCATCTGCTCCCCAGAGG...TGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGCCAGTAGTTCTGGCTaGGGCAGTGAAGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VSGESRKSCPVVSQGRPAASSSG*GSEVCL
Trigger: GAGACAAACTTCACTGCCTCAGCCAGAACTACTGGC...TGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp CAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGAAGGCGGGCCAAGGGTaGAGAATCTATCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QGFGFQEKVGNLVQLSPRKAGQG*RIYPGG
Trigger: TCCACCCGGATAGATTCTTCACCCTTGGCCCGCCTT...CCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp TTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGTGGGTGGGGCCCGCCTaGCGCAGAGGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: LFLIQAQFCLVYRDSISEWVGPA*RRGWTL
Trigger: GAGGGTCCACCCTCTGCGTCAGGCGGGCCCCACCCA...CTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp TCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTGGGTGGGGCCCGCCTaGCGCAGAGGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SHLFLIQAQFCLVYRDSIWVGPA*RRGWTL
Trigger: GAGGGTCCACCCTCTGCGTCAGGCGGGCCCCACCCA...AATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAACATGTAGAGAATCAGTaGGTTGCAAATTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VQLSPRGALQGRELYTRQHVENQ*VANFCR
Trigger: TCTGCAGAAATTTGCAACTCACTGATTCTCTACATG...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCGGCACTGGCTCAGTCTaGTGTGAAGGACATGGGAGT +
Preference number: 4 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRGTGSV*CEGHGS
Trigger: ACTCCCATGTCCTTCACAGCAGACTGAGCCAGTGCC...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TACCAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCTCCCAGTTGTCCCCGTaGTGCCATCACTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: YQGFGFQEKVGNLVQLSPSQLSP*CHHSLQ
Trigger: CTGGAGGGAGTGATGGCAGCACGGGGACAACTGGGA...GGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTGTAGGATGTGTTACCTGTCCAGAAAGCTaGCCCAGGAGGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRTLPFLRQILGVGVGCVTCPES*PRRDER
Trigger: CCTCTCATCCCTCCTGGGGCAGCTTTCTGGACAGGT...AACACATCCTACACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR GCA 90 bp CAACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTGCTCTGAATCCCTGCTaGCACTTCAGAAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QLPGQPRPLQSYHRKRACALNPC*HFRSPE
Trigger: CTCTGGGCTTCTGAAGTGGCAGCAGGGATTCAGAGC...ACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TACCAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCGGGCTCCTAGGGTCCTaGGTGAGGGTCCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: YQGFGFQEKVGNLVQLSPGLLGS*VRVQER
Trigger: TCTTTCCTGGACCCTCACGCAGGACCCTAGGAGCCC...GGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAATTTGAAGCAGGGATGAGAGGCAAGTaGGTCCCAGTTGTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LRMIVKGMGALEGLEFEAGMRGK*VPVVPV
Trigger: CACGGGGACAACTGGGACCCACTTGCCTCTCATCCC...TGCTTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp ATCCAGAAGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTGGATCCTTGTGAGCTGTaGTCCTGCCCTGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: IQKSFPRSRCWKLRKMALDPCEL*SCPVEE
Trigger: TTCCTCCACAGGGCAGGACCACAGCTCACAAGGATC...CAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR CCA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCGATCCTTGTGAGCTGTaGTCCTGCCCTGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRDPCEL*SCPVEE
Trigger: TTCCTCCACAGGGCAGGACCACAGCTCACAAGGATC...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421442.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CCAGAAGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTGGGTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PEVLSSEQVLEAQEDGIGSGRWH*DPCELW
Trigger: CCACAGCTCACAAGGATCCCAATGCCATCTTCCTGA...CCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR CCA 90 bp TGTCGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTAGGGACCTGGAGGTTTaGTTCAGCAGACCAGGAATC +
Preference number: 4 (lower is better)
Translates to: CRQCLRTLPFLRQILGVGRDLEV*FSRPGI
Trigger: GATTCCTGGTCTGCTGAACCAAACCTCCAGGTCCCT...ACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CCA 90 bp TGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTGTAGGATGTGGAGAATATCCAGGCTaGAGGTTGGGTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CLRTLPFLRQILGVGVGCGEYPG*RLGGRE
Trigger: CTCCCTGCCACCCAACCTCCAGCCTGGATATTCTCC...ACATCCTACACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CCA 90 bp GAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGTGTCCAGTAGGAGGATaGGTTGGGGAAGGAGAATAT +
Preference number: 4 (lower is better)
Translates to: EKVGNLVQLSPRGALQGRCPVGG*VGEGEY
Trigger: ATATTCTCCTTCCCCAACCCATCCTCCTACTGGACA...CCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCAAGAATCTATCCGGGTaGAGAAGGGCTCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRKNLSG*RRAPGP
Trigger: GGGTCCTGGAGCCCTTCTCCACCCGGATAGATTCTT...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGCTAGAGAGGTTCTGCTaGGGACAGCTGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QGFGFQEKVGNLVQLSPRLERFC*GQLWWV
Trigger: CACCCACCACAGCTGTCCCCAGCAGAACCTCTCTAG...CCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTAACCACGGAGAAGATTTaGATAGGGGGATCCATCTTT +
Preference number: 4 (lower is better)
Translates to: RKSCPVVSQGRPAGKGAVTTEKI*IGGSIF
Trigger: AAAGATGGATCCCCCTATCCAAATCTTCTCCGTGGT...TACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS-3UTR CCA 90 bp CGGCGCTCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACGAAGACATGTGGCGGTaGGGCACAGCCCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: RRSHLFLIQAQFCLVYRDEDMWR*GTAPPQ
Trigger: CTGTGGAGGGGCTGTGCCCCACCGCCACATGTCTTC...GTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGAGCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCAGGAATCTTGGCTCTaGATCCCTGCTGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRQESWL*IPAATS
Trigger: TGAAGTGGCAGCAGGGATTCAGAGCCAAGATTCCTG...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GATCAGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTACACGAGACAATGCTaGTGTCGGCAGTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DQSPTENDSKGDGGVGRPYTRQC*CRQCLR
Trigger: TCTCAGACACTGCCGACATCAGCATTGTCTCGTGTA...AGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCACTGGCTCAGTCTaGTGTGAAGGACATGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGFGFQEKVGNLVQLSPRGTGSV*CEGHGS
Trigger: ACTCCCATGTCCTTCACAGCAGACTGAGCCAGTGCC...CCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAATTTGAAGCAACCTGTCCAGAAAGCTaGCCCAGGAGGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRMIVKGMGALEGLEFEATCPES*PRRDER
Trigger: CCTCTCATCCCTCCTGGGGCAGCTTTCTGGACAGGT...TGCTTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGACTTTTACCAGGGCTTTaGGTTTCAGGAGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGLLPGL*VSGESR
Trigger: CCTACTTTCTCCTGAAACCCAAAGCCCTGGTAAAAG...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp AGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAATGGACATGGGCAACCTaGGACCTTTCCTGTACGTTG +
Preference number: 4 (lower is better)
Translates to: RVPLRMIVKGMGALEGLEWTWAT*DLSCTL
Trigger: CAACGTACAGGAAAGGTCCCAGGTTGCCCATGTCCA...TTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS-3UTR TCA 90 bp AACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTACAGGAATCTTGGCTCTaGATCCCTGCTGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: NCQASPGLCRVITEKEHVQESWL*IPAATS
Trigger: TGAAGTGGCAGCAGGGATTCAGAGCCAAGATTCCTG...TACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp GTTCAACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATACACGAGACAATGCTaGTGTCGGCAGTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: VQLPGQPRPLQSYHRKRAYTRQC*CRQCLR
Trigger: TCTCAGACACTGCCGACATCAGCATTGTCTCGTGTA...TGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp CTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAATTTGAAGCAGGAGCTCGTTCAGTGTaGGGACTAGAGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRMIVKGMGALEGLEFEAGARSV*GLERFC
Trigger: GCAGAACCTCTCTAGTCCTCACACTGAACGAGCTCC...TGCTTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp TTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGAGAGCCACCAGACACTGGTaGAGGCCCCCGGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: FLIQAQFCLVYRDSISERATRHW*RPPEVT
Trigger: CGTCACTTCCGGGGGCCTTCACCAGTGTCTGGTGGC...TCTCTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS-3UTR GCA 90 bp CAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGTCCCAGAATGTCCTGTaGCTTGGTCTCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: QGFGFQEKVGNLVQLSPRSQNVL*LGLLHL
Trigger: CAGATGGAGGAGACCAAGGCACAGGACATTCTGGGA...CCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CGGCGCTCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACGGACTAGAGAGGTTCTaGTGGGGACAGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRSHLFLIQAQFCLVYRDGLERF*WGQLWW
Trigger: CCACCACAGCTGTCCCCAGCAGAACCTCTCTAGTCC...GTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGAGCGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRSGRWH*DPCELW
Trigger: CCACAGCTCACAAGGATCCCAATGCCATCTTCCTGA...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCATGTCCAGTAGGAGGATaGGTTGGGGAAGGAGAATAT +
Preference number: 4 (lower is better)
Translates to: VSGESRKSCPVVSQGRPACPVGG*VGEGEY
Trigger: ATATTCTCCTTCCCCAACCCATCCTCCTACTGGACA...TGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGAGACTGGGCAGAGTAGGGTaGGGCAAAGGCGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: FLIQAQFCLVYRDSISERLGRVG*GKGGPR
Trigger: CCTTGGCCCGCCTTTGCCCCACCCTACTCTGCCCAG...TCTCTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAGATCTGTTAAGAATATaGGATCAGAGTCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: QEKVGNLVQLSPRGALQGDLLRI*DQSPTE
Trigger: CTCAGTGGGACTCTGATCCCATATTCTTAACAGATC...TCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
3UTR CAA 72 bp TCCAACAATCCAGAAGTCCTTTCCTCGGAGCAGGTGTaGGAAGCTCAGGAAGATGGCATTGGGATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SNNPEVLSSEQV*EAQEDGIGILV
Trigger: CACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACTTCTGGATTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477594.1
CDS-3UTR TCA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGCATGTAGAGAATCAGTaGGTTGCAAATTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGHVENQ*VANFCR
Trigger: TCTGCAGAAATTTGCAACTCACTGATTCTCTACATG...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp GCTTTTCGGCGCTCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATGTTCCAAGGAGGCTCTaGAGGGCCCCAAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: AFRRSHLFLIQAQFCLVYVPRRL*RAPRRR
Trigger: TCTCCTCCTTGGGGCCCTGCAGAGCCTCCTTGGAAC...ATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGAGCGCCGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CAACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTGCCAGCCCAGGCCTTTaGAGAGTTATCACAGAAAAA +
Preference number: 4 (lower is better)
Translates to: QLPGQPRPLQSYHRKRACASPGL*RVITEK
Trigger: TTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGC...ACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp CAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QGFGFQEKVGNLVQLSPRSGRWH*DPCELW
Trigger: CCACAGCTCACAAGGATCCCAATGCCATCTTCCTGA...CCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCATTTCTCAAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGCTGGGCAGAGTAGGGTaGGGCAAAGGCGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SFLKSKDLLRIWDQSPTELGRVG*GKGGPR
Trigger: CCTTGGCCCGCCTTTGCCCCACCCTACTCTGCCCAG...CTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTTGAGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGTCTGGCCGGGGTGTCTaGCTGGCGTGGCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LFLIQAQFCLVYRDSISESGRGV*LAWLPV
Trigger: AACAGGGAGCCACGCCAGCCAGACACCCCGGCCAGA...CTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGAGATCCCAGTTGTCCCCGTaGTGCCATCACTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FLIQAQFCLVYRDSISERSQLSP*CHHSLQ
Trigger: CTGGAGGGAGTGATGGCAGCACGGGGACAACTGGGA...TCTCTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGAGAATCCAGGCTGGAGGTTaGGTGGCAGGGAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FLIQAQFCLVYRDSISERIQAGG*VAGSLC
Trigger: ACACAGGCTCCCTGCCACCCAACCTCCAGCCTGGAT...TCTCTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTCAGTCAGCTCCATTCTaGCCGGGGTGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SHLFLIQAQFCLVYRDSIQSAPF*PGCLAG
Trigger: GCCAGCCAGACACCCCGGCCAGAATGGAGCTGACTG...AATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp AACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTACCTTTCTCTGTTTTCTaGCTCAAGGTTAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: NCQASPGLCRVITEKEHVPFSVF*LKVSLS
Trigger: GGAGAGACTAACCTTGAGTCAGAAAACAGAGAAAGG...TACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGCAGTTGTCCCCGTGCTaGCATCACTCCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFLIQAQFCLVYRDSISEQLSPC*HHSLQQ
Trigger: CTGCTGGAGGGAGTGATGGCAGCACGGGGACAACTG...CTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TCATTTCTCAAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGGGGCTCCTAGGGTCCTaGGTGAGGGTCCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SFLKSKDLLRIWDQSPTEGLLGS*VRVQER
Trigger: TCTTTCCTGGACCCTCACGCAGGACCCTAGGAGCCC...CTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTTGAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp CTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAATTTGAAGCAGCCAGCCCAGGCCTTTaGAGAGTTATCACAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LRMIVKGMGALEGLEFEAASPGL*RVITEK
Trigger: TTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGC...TGCTTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp ACAATGCTGATGTCGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTTTGGTCTCCTCCATCTaGGTTTTCCATTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: TMLMSAVSENLTLPETDSLVSSI*VFHSPK
Trigger: CTTGGGAGAATGGAAAACCCAGATGGAGGAGACCAA...AGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCGACATCAGCATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CCA 90 bp CAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGCTTTTACCAGGGCTTTaGGTTTCAGGAGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: QGFGFQEKVGNLVQLSPRLLPGL*VSGESR
Trigger: CCTACTTTCTCCTGAAACCCAAAGCCCTGGTAAAAG...CCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp TTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGAAGGCGGGCCAAGGGTaGAGAATCTATCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFLIQAQFCLVYRDSISEKAGQG*RIYPGG
Trigger: TCCACCCGGATAGATTCTTCACCCTTGGCCCGCCTT...CTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGAGAGCTCTGAATCCCTGCTaGCACTTCAGAAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLIQAQFCLVYRDSISERALNPC*HFRSPE
Trigger: CTCTGGGCTTCTGAAGTGGCAGCAGGGATTCAGAGC...TCTCTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp AAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGAATGATAGTGGGCTCCTAGGGTCCTaGGTGAGGGTCCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KSKDLLRIWDQSPTENDSGLLGS*VRVQER
Trigger: TCTTTCCTGGACCCTCACGCAGGACCCTAGGAGCCC...ACTATCATTCTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TCATTTCTCAAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGGGACTAGAGAGGTTCTaGTGGGGACAGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SFLKSKDLLRIWDQSPTEGLERF*WGQLWW
Trigger: CCACCACAGCTGTCCCCAGCAGAACCTCTCTAGTCC...CTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TACCAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCCTTTTACCAGGGCTTTaGGTTTCAGGAGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: YQGFGFQEKVGNLVQLSPLLPGL*VSGESR
Trigger: CCTACTTTCTCCTGAAACCCAAAGCCCTGGTAAAAG...GGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp TCATTTCTCAAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGGGCACTGGCTCAGTCTaGTGTGAAGGACATGGGAGT +
Preference number: 4 (lower is better)
Translates to: SFLKSKDLLRIWDQSPTEGTGSV*CEGHGS
Trigger: ACTCCCATGTCCTTCACAGCAGACTGAGCCAGTGCC...CTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTTGAGAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGCCTCGGAGCAGGTGTTaGAAGCTCAGGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: LFLIQAQFCLVYRDSISEPRSRC*KLRKMA
Trigger: TGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGG...CTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCATTTCTCAAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGAGGTATCCGGGGATTTaGTCCAGGGACCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SFLKSKDLLRIWDQSPTERYPGI*SRDLEV
Trigger: AACCTCCAGGTCCCTGGACCAAATCCCCGGATACCT...CTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTAAGAATCTATCCGGGTaGAGAAGGGCTCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: SHLFLIQAQFCLVYRDSIKNLSG*RRAPGP
Trigger: GGGTCCTGGAGCCCTTCTCCACCCGGATAGATTCTT...AATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR GCA 90 bp AAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGAATGATAGTGGCACTGGCTCAGTCTaGTGTGAAGGACATGGGAGT +
Preference number: 4 (lower is better)
Translates to: KSKDLLRIWDQSPTENDSGTGSV*CEGHGS
Trigger: ACTCCCATGTCCTTCACAGCAGACTGAGCCAGTGCC...ACTATCATTCTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTTTGGTCCAGGGACCTaGAGGTTTGGTTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SHLFLIQAQFCLVYRDSIFGPGT*RFGSAD
Trigger: GTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAA...AATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp GCTTTTCGGCGCTCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATTGTCCAGTAGGAGGATaGGTTGGGGAAGGAGAATAT +
Preference number: 4 (lower is better)
Translates to: AFRRSHLFLIQAQFCLVYCPVGG*VGEGEY
Trigger: ATATTCTCCTTCCCCAACCCATCCTCCTACTGGACA...ATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGAGCGCCGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTGGATCCATCTTTTCCTaGACATGGGCAACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SHLFLIQAQFCLVYRDSIGSIFS*TWATWD
Trigger: GTCCCAGGTTGCCCATGTCCAGGAAAAGATGGATCC...AATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS-3UTR TCA 90 bp TCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTCAGTTAGGAGAAGCATaGCCACGAGGAGCAATTCAG +
Preference number: 4 (lower is better)
Translates to: SHLFLIQAQFCLVYRDSIQLGEA*PRGAIQ
Trigger: CTGAATTGCTCCTCGTGGTCATGCTTCTCCTAACTG...AATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTTCTGAGTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LFLIQAQFCLVYRDSISESGRWH*DPCELW
Trigger: CCACAGCTCACAAGGATCCCAATGCCATCTTCCTGA...CTCAGAAATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCATTTCTCAAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGTCCAGAAGTCCTGTTTaGGAGCTCGTTCAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SFLKSKDLLRIWDQSPTESRSPV*ELVQCE
Trigger: CTCACACTGAACGAGCTCCCAAACAGGACTTCTGGA...CTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTTGAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR TCA 90 bp TCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTCCTTTCTCTGTTTTCTaGCTCAAGGTTAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SHLFLIQAQFCLVYRDSIPFSVF*LKVSLS
Trigger: GGAGAGACTAACCTTGAGTCAGAAAACAGAGAAAGG...AATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CCA 90 bp TCATTTCTCAAGAGTAAAGATCTGTTAAGAATATGGGATCAGAGTCCCACTGAGGATCTGTTAAGAATATaGGATCAGAGTCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: SFLKSKDLLRIWDQSPTEDLLRI*DQSPTE
Trigger: CTCAGTGGGACTCTGATCCCATATTCTTAACAGATC...CTCAGTGGGACTCTGATCCCATATTCTTAACAGATCTTTACTCTTGAGAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS CCA 90 bp GCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGGTAGGGGGCTaGCGAACAGCGGGGTTGTGGTTGAGGCTGGGCCACCAAAGCGGC +
Preference number: 5 (lower is better)
Translates to: ALRSGPVVTATRVGG*RTAGLWLRLGHQSG
Trigger: GCCGCTTTGGTGGCCCAGCCTCAACCACAACCCCGCTGTTCGCCAGCCCCCTACCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645603.2
CDS TCA 90 bp AGTGCTCAGGCCATCTTCCTCCCGTCCCAGACTTCGTGGCGCTGCTaGCAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: SAQAIFLPSQTSWRC*QGRGRRRWHEPESR
Trigger: GCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGCCACGAAGTCTGGGACGGGAGGAAGATGGCCTGAGCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645603.2
CDS GCA 90 bp CAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTaGGCTCTAGCCTCCGCTTCTCTATCTCCTCTCATTCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QGRGRRRWHEPESRC*ALASASLSPLIPRL
Trigger: CAGCCTGGGAATGAGAGGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645603.2
CDS GCA 90 bp AGGCTCTGCAGGGCCCCAAGGAGGAGACGGACCTGTCCAGAAAGCTaGCCCAGGAGGGATGAGAGGCAAGTGGGTCCCAGTTGTCCCCGT +
Preference number: 5 (lower is better)
Translates to: RLCRAPRRRRTCPES*PRRDERQVGPSCPR
Trigger: ACGGGGACAACTGGGACCCACTTGCCTCTCATCCCTCCTGGGGCAGCTTTCTGGACAGGTCCGTCTCCTCCTTGGGGCCCTGCAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 90 bp GGCTGGCGTGGCTCCCTGTTTGGGGCCTCTCCCCTGAATCCTTCCTaGGGCCATGGAGGCGGCTTAGGCTCTTGCACTTCTGGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: GWRGSLFGASPLNPS*GHGGGLGSCTSGQS
Trigger: ACTCTGCCCAGAAGTGCAAGAGCCTAAGCCGCCTCCATGGCCCCAGGAAGGATTCAGGGGAGAGGCCCCAAACAGGGAGCCACGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
CDS TCA 90 bp CGAACAGCGGGGTTGTGGTTGAGGCTGGGCCACCAAAGCGGCGTTTaGCAGTGCTCAGGCCATCTTCCTCCCGTCCCAGACTTCGTGGCG +
Preference number: 5 (lower is better)
Translates to: RTAGLWLRLGHQSGV*QCSGHLPPVPDFVA
Trigger: CGCCACGAAGTCTGGGACGGGAGGAAGATGGCCTGAGCACTGTCAAACGCCGCTTTGGTGGCCCAGCCTCAACCACAACCCCGCTGTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645603.2
CDS CCA 90 bp GACGGACCTGTCCAGAAAGCTGCCCCAGGAGGGATGAGAGGCAAGTaGGTCCCAGTTGTCCCCGTGCTGCCATCACTCCCTCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: DGPVQKAAPGGMRGK*VPVVPVLPSLPPAE
Trigger: TTCTGCTGGAGGGAGTGATGGCAGCACGGGGACAACTGGGACCCACTTGCCTCTCATCCCTCCTGGGGCAGCTTTCTGGACAGGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS-3UTR CAA 90 bp GTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACGAGACAACAGGTATCCGGGGATTaGGTCCAGGGACCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: VQLSPRGALQGRELYTRQQVSGD*VQGPGG
Trigger: ACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTG...TTGTCTCGTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CAA 90 bp GGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACGGAAATCTTGTCCAGTaGTCTCCCAGGGGCGCCCTG +
Preference number: 5 (lower is better)
Translates to: GNLVQLSPRGALQGRELYGNLVQ*SPRGAL
Trigger: CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC...GTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS TCA 90 bp GGCTCAGTCTGCTGTGAAGGACATGGGAGTCACGAAGCAGTTTACTaGGGACTCGGAGGTCACAAGCAGGAGGAGCCGGGCTGGACAGCG +
Preference number: 5 (lower is better)
Translates to: GSVCCEGHGSHEAVY*GLGGHKQEEPGWTA
Trigger: CGCTGTCCAGCCCGGCTCCTCCTGCTTGTGACCTCCGAGTCCTCAGTAAACTGCTTCGTGACTCCCATGTCCTTCACAGCAGACTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS-3UTR CAA 90 bp GAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCAAGTGGGTCCCAGTaGTCCCCGTGCTGCCATCAC +
Preference number: 5 (lower is better)
Translates to: ESRKSCPVVSQGRPAGKGASGSQ*SPCCHH
Trigger: GTGATGGCAGCACGGGGACAACTGGGACCCACTTGC...TCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CAA 90 bp AAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGAGCTGTACACCAGGTATCCGGGGATTaGGTCCAGGGACCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KSCPVVSQGRPAGKGAVHQVSGD*VQGPGG
Trigger: ACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTG...GTGTACAGCTCCCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS CCA 90 bp GGGTGGAAGAGGGAAGAGCGTATACTGTCCAGTAGGAGGATGGGTTaGGGAAGGAGAATATCCAGGCTGGAGGTTGGGTGGCAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: GWKREERILSSRRMG*GRRISRLEVGWQGA
Trigger: GGCTCCCTGCCACCCAACCTCCAGCCTGGATATTCTCCTTCCCCAACCCATCCTCCTACTGGACAGTATACGCTCTTCCCTCTTCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 90 bp GCACCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGGTCCTGCCCTGTGGAGGAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: APFLGAGVGSSGRWH*DPCELWSCPVEEAG
Trigger: CCCAGCTTCCTCCACAGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CAA 90 bp GAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAAGGGGAAATCTTGTCCAGTaGTCTCCCAGGGGCGCCCTG +
Preference number: 5 (lower is better)
Translates to: EKVGNLVQLSPRGALQGRGNLVQ*SPRGAL
Trigger: CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC...CCTTCCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS CCA 90 bp AGTCCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGGTCCTGCCCTGTGGAGGAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: SPFLGAGVGSSGRWH*DPCELWSCPVEEAG
Trigger: CCCAGCTTCCTCCACAGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS CCA 90 bp GGACCAGGGTCCACTCCTCCACCCACACACACCACGGAGAAGATTTaGATAGGGGGATCCATCTTTTCCTGGACATGGGCAACCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GPGSTPPPTHTTEKI*IGGSIFSWTWATWD
Trigger: GTCCCAGGTTGCCCATGTCCAGGAAAAGATGGATCCCCCTATCCAAATCTTCTCCGTGGTGTGTGTGGGTGGAGGAGTGGACCCTGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645603.2
ENST00000649095.1
CDS CCA 90 bp GCACCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGGTCCTGGGTTCCAAGGAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: APFLGAGVGSSGRWH*DPCELWSWVPRRLC
Trigger: GCAGAGCCTCCTTGGAACCCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650229.1
CDS-3UTR CAA 90 bp ATGTCGGCAGTGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGGCAAGTGGGTCCCAGTaGTCCCCGTGCTGCCATCAC +
Preference number: 5 (lower is better)
Translates to: MSAVSENLTLPETDSGSGASGSQ*SPCCHH
Trigger: GTGATGGCAGCACGGGGACAACTGGGACCCACTTGC...CCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACACTGCCGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CAA 90 bp GGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGGGAAATCTTGTCCAGTaGTCTCCCAGGGGCGCCCTG +
Preference number: 5 (lower is better)
Translates to: GFQEKVGNLVQLSPRGALGNLVQ*SPRGAL
Trigger: CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC...CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS CCA 90 bp AAGGTGGGTGGAAGAGGGAAGAGCGTATACTGTCCAGTAGGAGGATaGGTTGGGGAAGGAGAATATCCAGGCTGGAGGTTGGGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: KVGGRGKSVYCPVGG*VGEGEYPGWRLGGR
Trigger: CCTGCCACCCAACCTCCAGCCTGGATATTCTCCTTCCCCAACCCATCCTCCTACTGGACAGTATACGCTCTTCCCTCTTCCACCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 90 bp GGAAACGCACCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATaGCATTGGGATCCTTGTGAGCTGTGGTCCTGCCCTGTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GNAPFLGAGVGSSGR*HWDPCELWSCPVEE
Trigger: TTCCTCCACAGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGTGCGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
CDS CCA 90 bp GGAAACGCACCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATaGCATTGGGATCCTTGTGAGCTGTGGTCCTGGGTTCCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GNAPFLGAGVGSSGR*HWDPCELWSWVPRR
Trigger: CCTCCTTGGAACCCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGTGCGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650229.1
CDS-3UTR CAA 90 bp GGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGTCCTCGGAGCAGGTGTaGGAAGCTCAGGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: GFQEKVGNLVQLSPRGALSSEQV*EAQEDG
Trigger: GCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGA...CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CAA 90 bp TCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCCCTGCAGGGAGCAGACCAGGAATCTaGGCTCTGAATCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SGESRKSCPVVSQGRPAGSRPGI*ALNPCC
Trigger: GCAGCAGGGATTCAGAGCCAAGATTCCTGGTCTGCT...CCCTGCAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS TCA 90 bp TTGTCTCCAACAATCCAGAAGTCCTGTTTGGGAGCTCGTTCAGTGTaGGGACTAGAGAGGTTCTGCTGGGGACAGCTGTGGTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LSPTIQKSCLGARSV*GLERFCWGQLWWVG
Trigger: CCCCACCCACCACAGCTGTCCCCAGCAGAACCTCTCTAGTCCTCACACTGAACGAGCTCCCAAACAGGACTTCTGGATTGTTGGAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 90 bp ATCCTGTTCAGGTATCCGGGGATTTGGTCCAGGGACCTGGAGGTTTaGTTCAGCAGACCAGGAATCTTGGCTCTGAATCCCTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: ILFRYPGIWSRDLEV*FSRPGILALNPCCH
Trigger: GTGGCAGCAGGGATTCAGAGCCAAGATTCCTGGTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTGAACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS-3UTR CAA 90 bp CAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGCAAGTGGGTCCCAGTaGTCCCCGTGCTGCCATCAC +
Preference number: 5 (lower is better)
Translates to: QGFGFQEKVGNLVQLSPRASGSQ*SPCCHH
Trigger: GTGATGGCAGCACGGGGACAACTGGGACCCACTTGC...CCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS GCA 90 bp CTGTGTCTGATGTTCCTGAGGAAATGTCCGGGGCTCCTAGGGTCCTaGGTGAGGGTCCAGGAAAGAGTCCACGAGTTCCATTCAAGAGTT +
Preference number: 5 (lower is better)
Translates to: LCLMFLRKCPGLLGS*VRVQERVHEFHSRV
Trigger: AACTCTTGAATGGAACTCGTGGACTCTTTCCTGGACCCTCACGCAGGACCCTAGGAGCCCCGGACATTTCCTCAGGAACATCAGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS-3UTR CAA 90 bp GATCAGAGTCCCACTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTAGCAGACCAGGAATCTaGGCTCTGAATCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: DQSPTENDSKGDGGVGRPSRPGI*ALNPCC
Trigger: GCAGCAGGGATTCAGAGCCAAGATTCCTGGTCTGCT...AGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAGTGGGACTCTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CAA 90 bp TGTCTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTGTAGGATGTCAGGTATCCGGGGATTaGGTCCAGGGACCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: CLRTLPFLRQILGVGVGCQVSGD*VQGPGG
Trigger: ACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTG...ACATCCTACACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CAA 90 bp CCAGGGCTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGAAATCTTGTCCAGTaGTCTCCCAGGGGCGCCCTG +
Preference number: 5 (lower is better)
Translates to: PGLWVSGESRKSCPVVSQGNLVQ*SPRGAL
Trigger: CAGGGCGCCCCTGGGAGACAACTGGACAAGATTTCC...CTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CAA 90 bp CTGAGAACCTTACCCTTCCTGAGACAGATTCTGGGAGTGGGTGTAGGATGTGTTTCCTCGGAGCAGGTGTaGGAAGCTCAGGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: LRTLPFLRQILGVGVGCVSSEQV*EAQEDG
Trigger: GCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGA...AACACATCCTACACCCACTCCCAGAATCTGTCTCAGGAAGGGTAAGGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS-3UTR CAA 90 bp AAGGGAGCTGTACACGAGACAATGCTGATGTCGGCAGTGTCTGAGAACCTTACCAGCAGACCAGGAATCTaGGCTCTGAATCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: KGAVHETMLMSAVSENLTSRPGI*ALNPCC
Trigger: GCAGCAGGGATTCAGAGCCAAGATTCCTGGTCTGCT...GGTAAGGTTCTCAGACACTGCCGACATCAGCATTGTCTCGTGTACAGCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421442.2
CDS TCA 90 bp GAATCCCTGCTGCCACTTCAGAAGCCCAGAGCCAGTAGTTCTGGCTaGGGCAGTGAAGTTTGTCTCCAACAATCCAGAAGTCCTGTTTGG +
Preference number: 5 (lower is better)
Translates to: ESLLPLQKPRASSSG*GSEVCLQQSRSPVW
Trigger: CCAAACAGGACTTCTGGATTGTTGGAGACAAACTTCACTGCCTCAGCCAGAACTACTGGCTCTGGGCTTCTGAAGTGGCAGCAGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS-3UTR CAA 90 bp CTTTGGGTTTCAGGAGAAAGTAGGAAATCTTGTCCAGTTGTCTCCCAGGGGCGCAAGGGGATGGGGGCGTaGGAAGGCCTTGAATTTGAA +
Preference number: 5 (lower is better)
Translates to: LWVSGESRKSCPVVSQGRKGMGA*EGLEFE
Trigger: TTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTT...GCGCCCCTGGGAGACAACTGGACAAGATTTCCTACTTTCTCCTGAAACCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS CCA 90 bp GTTCCATTCAAGAGTTCGTGTATCCTGTTCAGGTATCCGGGGATTTaGTCCAGGGACCTGGAGGTTTGGTTCAGCAGACCAGGAATCTTG +
Preference number: 5 (lower is better)
Translates to: VPFKSSCILFRYPGI*SRDLEVWFSRPGIL
Trigger: CAAGATTCCTGGTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTGAACAGGATACACGAACTCTTGAATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS-3UTR CAA 90 bp CTGAGAATGATAGTAAAGGGGATGGGGGCGTTGGAAGGCCTTGAATTTGAAGCAAGCAGACCAGGAATCTaGGCTCTGAATCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LRMIVKGMGALEGLEFEASRPGI*ALNPCC
Trigger: GCAGCAGGGATTCAGAGCCAAGATTCCTGGTCTGCT...TGCTTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTTTACTATCATTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CAA 90 bp AACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTAAAGGGGATGGGGGCGTaGGAAGGCCTTGAATTTGAA +
Preference number: 5 (lower is better)
Translates to: NCQASPGLCRVITEKEHVKGMGA*EGLEFE
Trigger: TTCAAATTCAAGGCCTTCCAACGCCCCCATCCCCTT...TACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000647395.1
ENST00000649095.1
CDS-3UTR CAA 90 bp AACTGCCAGGCCAGCCCAGGCCTTTGCAGAGTTATCACAGAAAAAGAGCATGTAGACCTTTCCTGTACGTaGTCATCTTTAAAGACAAGT +
Preference number: 5 (lower is better)
Translates to: NCQASPGLCRVITEKEHVDLSCT*SSLKTS
Trigger: ACTTGTCTTTAAAGATGACAACGTACAGGAAAGGTC...TACATGCTCTTTTTCTGTGATAACTCTGCAAAGGCCTGGGCTGGCCTGGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS-3UTR CAA 90 bp TCCCATTTATTCCTTATACAGGCTCAGTTTTGTCTAGTGTATAGGGACAGCATTCACCACGGAGAAGATTaGGATAGGGGGATCCATCTT +
Preference number: 5 (lower is better)
Translates to: SHLFLIQAQFCLVYRDSIHHGED*DRGIHL
Trigger: AAGATGGATCCCCCTATCCAAATCTTCTCCGTGGTG...AATGCTGTCCCTATACACTAGACAAAACTGAGCCTGTATAAGGAATAAATGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS CCA 72 bp AGCGGGCCCGTGGTGACGGCCACACGGGTAGGGGGCTaGCGAACAGCGGGGTTGTGGTTGAGGCTGGGCCAC +
Preference number: 6 (lower is better)
Translates to: SGPVVTATRVGG*RTAGLWLRLGH
Trigger: GTGGCCCAGCCTCAACCACAACCCCGCTGTTCGCCAGCCCCCTACCCGTGTGGCCGTCACCACGGGCCCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645603.2
CDS TCA 72 bp GCCATCTTCCTCCCGTCCCAGACTTCGTGGCGCTGCTaGCAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCC +
Preference number: 6 (lower is better)
Translates to: AIFLPSQTSWRC*QGRGRRRWHEP
Trigger: GGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGCCACGAAGTCTGGGACGGGAGGAAGATGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645603.2
CDS GCA 72 bp CGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTaGTGCGCTCTAGCCTCCGCTTCTCTATCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: RGRRRWHEPESR*CALASASLSPL
Trigger: GAGAGGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645603.2
CDS TCA 72 bp GAGACGGACCTGTCCAGAAAGCTGCCCCAGGAGGGATaGGAGGCAAGTGGGTCCCAGTTGTCCCCGTGCTGC +
Preference number: 6 (lower is better)
Translates to: ETDLSRKLPQEG*EASGSQLSPCC
Trigger: GCAGCACGGGGACAACTGGGACCCACTTGCCTCTCATCCCTCCTGGGGCAGCTTTCTGGACAGGTCCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS GCA 72 bp AGGGCCCCAAGGAGGAGACGGACCTGTCCAGAAAGCTaGCCCAGGAGGGATGAGAGGCAAGTGGGTCCCAGT +
Preference number: 6 (lower is better)
Translates to: RAPRRRRTCPES*PRRDERQVGPS
Trigger: ACTGGGACCCACTTGCCTCTCATCCCTCCTGGGGCAGCTTTCTGGACAGGTCCGTCTCCTCCTTGGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS GCA 72 bp GGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTaGGCTCTAGCCTCCGCTTCTCTATCTCCTCTCATT +
Preference number: 6 (lower is better)
Translates to: GRRRWHEPESRC*ALASASLSPLI
Trigger: AATGAGAGGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTGCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645603.2
CDS CCA 72 bp CACAGCCCCTCCACAGCAGCAGGTCATACGCCTGCCTaGGCCACTTCTGCCCAATCAGAGAAGGGAGCCACC +
Preference number: 6 (lower is better)
Translates to: HSPSTAAGHTPA*ATSAQSEKGAT
Trigger: GGTGGCTCCCTTCTCTGATTGGGCAGAAGTGGCCCAGGCAGGCGTATGACCTGCTGCTGTGGAGGGGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645603.2
ENST00000649095.1
CDS TCA 72 bp GGGTTGTGGTTGAGGCTGGGCCACCAAAGCGGCGTTTaGCAGTGCTCAGGCCATCTTCCTCCCGTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: GLWLRLGHQSGV*QCSGHLPPVPD
Trigger: GTCTGGGACGGGAGGAAGATGGCCTGAGCACTGTCAAACGCCGCTTTGGTGGCCCAGCCTCAACCACAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645603.2
CDS CCA 72 bp GTCCAGAAAGCTGCCCCAGGAGGGATGAGAGGCAAGTaGGTCCCAGTTGTCCCCGTGCTGCCATCACTCCCT +
Preference number: 6 (lower is better)
Translates to: VQKAAPGGMRGK*VPVVPVLPSLP
Trigger: AGGGAGTGATGGCAGCACGGGGACAACTGGGACCCACTTGCCTCTCATCCCTCCTGGGGCAGCTTTCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 72 bp GGCTCCCTGTTTGGGGCCTCTCCCCTGAATCCTTCCTaGGGCCATGGAGGCGGCTTAGGCTCTTGCACTTCT +
Preference number: 6 (lower is better)
Translates to: GSLFGASPLNPS*GHGGGLGSCTS
Trigger: AGAAGTGCAAGAGCCTAAGCCGCCTCCATGGCCCCAGGAAGGATTCAGGGGAGAGGCCCCAAACAGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
CDS TCA 72 bp TGCTGTGAAGGACATGGGAGTCACGAAGCAGTTTACTaGGGACTCGGAGGTCACAAGCAGGAGGAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: CCEGHGSHEAVY*GLGGHKQEEPG
Trigger: GCCCGGCTCCTCCTGCTTGTGACCTCCGAGTCCTCAGTAAACTGCTTCGTGACTCCCATGTCCTTCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CAA 90 bp CCAGTAGGAGGATGGGTTGGGGAAGGAGAATATCCAGGCTGGAGGTaGGGTGGCAGGGAGCCTGTGTCTGATGTTCCTGAGGAAATGTCC +
Preference number: 6 (lower is better)
Translates to: PVGGWVGEGEYPGWR*GGREPVSDVPEEMS
Trigger: GGACATTTCCTCAGGAACATCAGACACAGGCTCCCTGCCACCCAACCTCCAGCCTGGATATTCTCCTTCCCCAACCCATCCTCCTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS TCA 72 bp TGTTGGAAGCTCAGGAAGATGGCATTGGGATCCTTGTaGGCTGTGGTCCTGCCCTGGGTTCCAAGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: CWKLRKMALGSL*AVVLPWVPRRL
Trigger: GAGCCTCCTTGGAACCCAGGGCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445696.6
CDS GCA 72 bp ATGTTCCTGAGGAAATGTCCGGGGCTCCTAGGGTCCTaGGTGAGGGTCCAGGAAAGAGTCCACGAGTTCCAT +
Preference number: 6 (lower is better)
Translates to: MFLRKCPGLLGS*VRVQERVHEFH
Trigger: ATGGAACTCGTGGACTCTTTCCTGGACCCTCACGCAGGACCCTAGGAGCCCCGGACATTTCCTCAGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 72 bp CTCGGAGCAGGTGTTGGAAGCTCAGGAAGATGGCATTaGGATCCTTGTGAGCTGTGGTCCTGGGTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: LGAGVGSSGRWH*DPCELWSWVPR
Trigger: CCTTGGAACCCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650229.1
CDS GCA 72 bp CTCCAGCAGAAGGGTCACTGCTCCCAGAATGTCCTGTaGCTTGGTCTCCTCCATCTGGGTTTTCCATTCTCC +
Preference number: 6 (lower is better)
Translates to: LQQKGHCSQNVL*LGLLHLGFPFS
Trigger: GGAGAATGGAAAACCCAGATGGAGGAGACCAAGGCACAGGACATTCTGGGAGCAGTGACCCTTCTGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 72 bp CCTTTCCTCGGAGCAGGTGTTGGAAGCTCAGGAAGATaGCATTGGGATCCTTGTGAGCTGTGGTCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: PFLGAGVGSSGR*HWDPCELWSWV
Trigger: AACCCAGGACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650229.1
CDS CAA 72 bp AGGGACCTGGAGGTTTGGTTCAGCAGACCAGGAATCTaGGCTCTGAATCCCTGCTGCCACTTCAGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: RDLEVWFSRPGI*ALNPCCHFRSP
Trigger: TGGGCTTCTGAAGTGGCAGCAGGGATTCAGAGCCAAGATTCCTGGTCTGCTGAACCAAACCTCCAGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CAA 72 bp CAGGTATCCGGGGATTTGGTCCAGGGACCTGGAGGTTaGGTTCAGCAGACCAGGAATCTTGGCTCTGAATCC +
Preference number: 6 (lower is better)
Translates to: QVSGDLVQGPGG*VQQTRNLGSES
Trigger: GGATTCAGAGCCAAGATTCCTGGTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CAA 72 bp GTCCACTCCTCCACCCACACACACCACGGAGAAGATTaGGATAGGGGGATCCATCTTTTCCTGGACATGGGC +
Preference number: 6 (lower is better)
Translates to: VHSSTHTHHGED*DRGIHLFLDMG
Trigger: GCCCATGTCCAGGAAAAGATGGATCCCCCTATCCAAATCTTCTCCGTGGTGTGTGTGGGTGGAGGAGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645603.2
ENST00000649095.1
CDS CAA 90 bp TATCCTGTTCAGGTATCCGGGGATTTGGTCCAGGGACCTGGAGGTTaGGTTCAGCAGACCAGGAATCTTGGCTCTGAATCCCTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: YPVQVSGDLVQGPGG*VQQTRNLGSESLLP
Trigger: TGGCAGCAGGGATTCAGAGCCAAGATTCCTGGTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTGAACAGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CAA 90 bp CCCTCCTACAAGCATCAGGAAACGCACCTTTCCTCGGAGCAGGTGTaGGAAGCTCAGGAAGATGGCATTGGGATCCTTGTGAGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: PSYKHQETHLSSEQV*EAQEDGIGILVSCG
Trigger: ACCACAGCTCACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGTGCGTTTCCTGATGCTTGTAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS TCA 72 bp GGCTGGACAGCGTTAGCCTTGCAGTTAGGAGAAGCATaGCCACGAGGAGCAATTCAGTCAGCTCCATTCTGG +
Preference number: 6 (lower is better)
Translates to: GWTALALQLGEA*PRGAIQSAPFW
Trigger: CCAGAATGGAGCTGACTGAATTGCTCCTCGTGGTCATGCTTCTCCTAACTGCAAGGCTAACGCTGTCCAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
CDS CCA 72 bp GGAAGAGGGAAGAGCGTATACTGTCCAGTAGGAGGATaGGTTGGGGAAGGAGAATATCCAGGCTGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: GRGKSVYCPVGG*VGEGEYPGWRL
Trigger: CAACCTCCAGCCTGGATATTCTCCTTCCCCAACCCATCCTCCTACTGGACAGTATACGCTCTTCCCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 72 bp TCCACTCCTCCACCCACACACACCACGGAGAAGATTTaGATAGGGGGATCCATCTTTTCCTGGACATGGGCA +
Preference number: 6 (lower is better)
Translates to: STPPPTHTTEKI*IGGSIFSWTWA
Trigger: TGCCCATGTCCAGGAAAAGATGGATCCCCCTATCCAAATCTTCTCCGTGGTGTGTGTGGGTGGAGGAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645603.2
ENST00000649095.1
CDS CAA 72 bp CAAGAGTTCGTGTATCCTGTTCAGGTATCCGGGGATTaGGTCCAGGGACCTGGAGGTTTGGTTCAGCAGACC +
Preference number: 6 (lower is better)
Translates to: QEFVYPVQVSGD*VQGPGGLVQQT
Trigger: GGTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTGAACAGGATACACGAACTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 72 bp AAGAGTTCGTGTATCCTGTTCAGGTATCCGGGGATTTaGTCCAGGGACCTGGAGGTTTGGTTCAGCAGACCA +
Preference number: 6 (lower is better)
Translates to: KSSCILFRYPGI*SRDLEVWFSRP
Trigger: TGGTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTGAACAGGATACACGAACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CAA 72 bp AAGCATCAGGAAACGCACCTTTCCTCGGAGCAGGTGTaGGAAGCTCAGGAAGATGGCATTGGGATCCTTGTG +
Preference number: 6 (lower is better)
Translates to: KHQETHLSSEQV*EAQEDGIGILV
Trigger: CACAAGGATCCCAATGCCATCTTCCTGAGCTTCCAACACCTGCTCCGAGGAAAGGTGCGTTTCCTGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 72 bp ACGGAGAAGATTTGGATAGGGGGATCCATCTTTTCCTaGACATGGGCAACCTGGGACCTTTCCTGTACGTTG +
Preference number: 6 (lower is better)
Translates to: TEKIWIGGSIFS*TWATWDLSCTL
Trigger: CAACGTACAGGAAAGGTCCCAGGTTGCCCATGTCCAGGAAAAGATGGATCCCCCTATCCAAATCTTCTCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649095.1
CDS CAA 90 bp AGTTCCATTCAAGAGTTCGTGTATCCTGTTCAGGTATCCGGGGATTaGGTCCAGGGACCTGGAGGTTTGGTTCAGCAGACCAGGAATCTT +
Preference number: 6 (lower is better)
Translates to: SSIQEFVYPVQVSGD*VQGPGGLVQQTRNL
Trigger: AAGATTCCTGGTCTGCTGAACCAAACCTCCAGGTCCCTGGACCAAATCCCCGGATACCTGAACAGGATACACGAACTCTTGAATGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421442.2
ENST00000445696.6
ENST00000645603.2
ENST00000647395.1
ENST00000649095.1
ENST00000650229.1
CDS CCA 72 bp GTGAGGTTGAAAGATGAGGAGGAAATCATTGTCAGCTaGTATTCCAGGAATTCCCATTCAGGACCCAGACCA +
Preference number: 6 (lower is better)
Translates to: VRLKDEEEIIVS*YSRNSHSGPRP
Trigger: TGGTCTGGGTCCTGAATGGGAATTCCTGGAATACCAGCTGACAATGATTTCCTCCTCATCTTTCAACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648612.1