Pregenerated sensors for THORLNC (Homo sapiens)
Ensembl gene IDs: ENSG00000226856Ensembl transcript IDs: ENST00000414886.5, ENST00000449075.2, ENST00000449819.1, ENST00000647942.1, ENST00000648779.1, ENST00000661786.1, ENST00000669120.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTTCGTGCGGTTCTGCGAGGCGCTCCACGATCCCGCCCCCTGGCATaGCAGCACCTACCGGCGGCGCGAACTCGGCTGCTGTGGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: FRAVLRGAPRSRPLA*QHLPAARTRLLWAA Trigger: AGCAGCCCACAGCAGCCGAGTTCGCGCCGCCGGTAGGTGCTGCCATGCCAGGGGGCGGGATCGTGGAGCGCCTCGCAGAACCGCACGAAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414886.5 ENST00000449819.1 |
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| CDS CCA 90 bp | TTTGCTTTCGTGCGGTTCTGCGAGGCGCTCCACGATCCCGCCCCCTaGCATGGCAGCACCTACCGGCGGCGCGAACTCGGCTGCTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: FAFVRFCEALHDPAP*HGSTYRRRELGCCG Trigger: CCCACAGCAGCCGAGTTCGCGCCGCCGGTAGGTGCTGCCATGCCAGGGGGCGGGATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414886.5 ENST00000449819.1 |
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| CDS GCA 90 bp | CTGAGTCCAGCCACCGGCGGCGCGAACTCGGCTGCTGTGGGCTGCTaGGCGCTCTCGCCTTTGTCAGTTTCATCAGCCGGCGTTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LSPATGGANSAAVGC*ALSPLSVSSAGVSA Trigger: AGCTGAAACGCCGGCTGATGAAACTGACAAAGGCGAGAGCGCGCAGCAGCCCACAGCAGCCGAGTTCGCGCCGCCGGTGGCTGGACTCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661786.1 |
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| CDS GCA 90 bp | TGTCTGAGTCCAGCCACCGGCGGCGCGAACTCGGCTGCTGTGGGCTaGTGCGCGCTCTCGCCTTTGTCAGTTTCATCAGCCGGCGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: CLSPATGGANSAAVG*CALSPLSVSSAGVS Trigger: TGAAACGCCGGCTGATGAAACTGACAAAGGCGAGAGCGCGCAGCAGCCCACAGCAGCCGAGTTCGCGCCGCCGGTGGCTGGACTCAGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661786.1 |
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| CDS GCA 90 bp | TTTCTGCTCCGGAGAGATGGCTTTGTTTTTGCTTTCGTGCGGTTCTaGGAGGCGCTCCACGATCCCGCCCCCTGGCATGGCAGCACCTAC | + |
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Preference number: 5 (lower is better) Translates to: FLLRRDGFVFAFVRF*EALHDPAPWHGSTY Trigger: GTAGGTGCTGCCATGCCAGGGGGCGGGATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS TCA 90 bp | GGGGAGGTGACTCACAGCGGGCAGTGGCAGTGGGAGCTGCAGTGCTaGGGATCTGGGTGGGGTATAAGGAGCGATTGTAAGGCAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: GEVTHSGQWQWELQC*GSGWGIRSDCKAET Trigger: TGTTTCTGCCTTACAATCGCTCCTTATACCCCACCCAGATCCTCAGCACTGCAGCTCCCACTGCCACTGCCCGCTGTGAGTCACCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS GCA 90 bp | GGCCACGTCTGTTCTATTTCTGCTCCGGAGAGATGGCTTTGTTTTTaGTTTCGTGCGGTTCTGCGAGGCGCTCCACGATCCCGCCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: GHVCSISAPERWLCF*FRAVLRGAPRSRPL Trigger: CAGGGGGCGGGATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACAGACGTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS CCA 90 bp | GCAAGGCAGGTGAAAATCCAGAGAGAAGCACCTTGGAACCCAAACTaGAGCGTGATGTGTCTGAGTCCAGCCACCGGCGGCGCGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: ARQVKIQREAPWNPN*SVMCLSPATGGANS Trigger: CGAGTTCGCGCCGCCGGTGGCTGGACTCAGACACATCACGCTCCAGTTTGGGTTCCAAGGTGCTTCTCTCTGGATTTTCACCTGCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661786.1 |
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| CDS GCA 90 bp | CTGTTCTATTTCTGCTCCGGAGAGATGGCTTTGTTTTTGCTTTCGTaGGGTTCTGCGAGGCGCTCCACGATCCCGCCCCCTGGCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: LFYFCSGEMALFLLS*GSARRSTIPPPGMA Trigger: TGCCATGCCAGGGGGCGGGATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS CCA 90 bp | TTGGCTTTCCCCGGCCACGTCTGTTCTATTTCTGCTCCGGAGAGATaGCTTTGTTTTTGCTTTCGTGCGGTTCTGCGAGGCGCTCCACGA | + |
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Preference number: 5 (lower is better) Translates to: LAFPGHVCSISAPER*LCFCFRAVLRGAPR Trigger: TCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACAGACGTGGCCGGGGAAAGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS GCA 90 bp | CGGCAGGAAATATTTGGCTTTCCCCGGCCACGTCTGTTCTATTTCTaGTCCGGAGAGATGGCTTTGTTTTTGCTTTCGTGCGGTTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: RQEIFGFPRPRLFYF*SGEMALFLLSCGSA Trigger: CGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACAGACGTGGCCGGGGAAAGCCAAATATTTCCTGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449075.2 |
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| CDS CCA 90 bp | CCTCCTCCTTTGAAGCCACCGCACGTGTTGTCTCTCCCATTTCTTTaGCAGCCAATTGGCCTTCCATATCTCGGACTCCATATCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: PPPLKPPHVLSLPFL*QPIGLPYLGLHIQD Trigger: ATCCTGGATATGGAGTCCGAGATATGGAAGGCCAATTGGCTGCCAAAGAAATGGGAGAGACAACACGTGCGGTGGCTTCAAAGGAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414886.5 |
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| CDS TCA 90 bp | CTGTGTATCCAGGCATGCTCCCAGAAGGTGGTGCAAATTCACTGCTaGTACAGTAAAGGAGGACGTGGCTTTCTTTTCCAGCCCTACCCT | + |
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Preference number: 5 (lower is better) Translates to: LCIQACSQKVVQIHC*YSKGGRGFLFQPYP Trigger: AGGGTAGGGCTGGAAAAGAAAGCCACGTCCTCCTTTACTGTATCAGCAGTGAATTTGCACCACCTTCTGGGAGCATGCCTGGATACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647942.1 |
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| CDS GCA 90 bp | CAGCCACAAATATTTGGCTTTCCCCGGCCACGTCTGTTCTATTTCTaGTCCGGAGAGATGGCTTTGTTTTTGCTTTCGTGCGGTTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: QPQIFGFPRPRLFYF*SGEMALFLLSCGSA Trigger: CGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACAGACGTGGCCGGGGAAAGCCAAATATTTGTGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000414886.5 ENST00000449819.1 |
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| CDS GCA 90 bp | TTATCCGGGAGAGAGACCTTTCCAATCAACCTGTGTTGTGGGGGTTaGAAAAACTCCCTCCGAGAAAGCGATTGGAGAGAGGCTTTATGG | + |
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Preference number: 5 (lower is better) Translates to: LSGRETFPINLCCGG*KNSLRESDWREALW Trigger: CCATAAAGCCTCTCTCCAATCGCTTTCTCGGAGGGAGTTTTTGCAACCCCCACAACACAGGTTGATTGGAAAGGTCTCTCTCCCGGATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS CCA 90 bp | GCAAGGCAGGTGAAAATCCAGAGAGAAGCACCTTGGAACCCAAACTaGAGCGTGATGTGTCTGAGTCCAGCCACAAATATTTGGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: ARQVKIQREAPWNPN*SVMCLSPATNIWLS Trigger: GGAAAGCCAAATATTTGTGGCTGGACTCAGACACATCACGCTCCAGTTTGGGTTCCAAGGTGCTTCTCTCTGGATTTTCACCTGCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414886.5 ENST00000449819.1 |
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| CDS CCA 90 bp | TTTCTGTCTGGCCAAGACCTGCTGTTAGGGGCCAAAGTCATTTGTTaGGTATTGCCGGACACCCAGTTGGCCCAGCGTAATCAATCATTT | + |
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Preference number: 5 (lower is better) Translates to: FLSGQDLLLGAKVIC*VLPDTQLAQRNQSF Trigger: AAATGATTGATTACGCTGGGCCAACTGGGTGTCCGGCAATACCCAACAAATGACTTTGGCCCCTAACAGCAGGTCTTGGCCAGACAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 ENST00000647942.1 ENST00000648779.1 ENST00000661786.1 ENST00000669120.1 |
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| CDS CCA 90 bp | GCAAGGCAGGTGAAAATCCAGAGAGAAGCACCTTGGAACCCAAACTaGAGCGTGATGTGTCTGAGTCCAGCCACACAGATAGTAGTTATC | + |
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Preference number: 5 (lower is better) Translates to: ARQVKIQREAPWNPN*SVMCLSPATQIVVI Trigger: GATAACTACTATCTGTGTGGCTGGACTCAGACACATCACGCTCCAGTTTGGGTTCCAAGGTGCTTCTCTCTGGATTTTCACCTGCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647942.1 |
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| CDS CCA 90 bp | ATTGTTGTTATCCGGGAGAGAGACCTTTCCAATCAACCTGTGTTGTaGGGGTTGCAAAAACTCCCTCCGAGAAAGCGATTGGAGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: IVVIRERDLSNQPVL*GLQKLPPRKRLERG Trigger: GCCTCTCTCCAATCGCTTTCTCGGAGGGAGTTTTTGCAACCCCCACAACACAGGTTGATTGGAAAGGTCTCTCTCCCGGATAACAACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS TCA 90 bp | GTTCCCAAATCCTTGCTGGCCAAAGAGCATGTGGACCAGAAGAGGTaGAATGCTCTGATCCCTTTCTTGATGCTCTGTTCTTCTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: VPKSLLAKEHVDQKR*NALIPFLMLCSSVA Trigger: AGCCACAGAAGAACAGAGCATCAAGAAAGGGATCAGAGCATTTCACCTCTTCTGGTCCACATGCTCTTTGGCCAGCAAGGATTTGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS GCA 90 bp | GATGTGTCTGAGTCCAGCCACCTAATGATGTTTGCTTCACTGCCTTaGTCGATTGTGTTCACCAGGACGGCAGGAAATATTTGGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: DVSESSHLMMFASLP*SIVFTRTAGNIWLS Trigger: GGAAAGCCAAATATTTCCTGCCGTCCTGGTGAACACAATCGAGCAAGGCAGTGAAGCAAACATCATTAGGTGGCTGGACTCAGACACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449075.2 |
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| CDS GCA 90 bp | TCAGCACACAGTCATCCTGGTTTTCCAGCCAGGAGTCTAGAGCTGTaGTGTCATTGGAGATCAGGAAAAGGCAGAGCATCAGTACTAGAT | + |
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Preference number: 5 (lower is better) Translates to: SAHSHPGFPARSLEL*CHWRSGKGRASVLD Trigger: ATCTAGTACTGATGCTCTGCCTTTTCCTGATCTCCAATGACAGCACAGCTCTAGACTCCTGGCTGGAAAACCAGGATGACTGTGTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CCA 90 bp | AGTCATCCTGGTTTTCCAGCCAGGAGTCTAGAGCTGTGCTGTCATTaGAGATCAGGAAAAGGCAGAGCATCAGTACTAGATGGGCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: SHPGFPARSLELCCH*RSGKGRASVLDGQY Trigger: ATACTGCCCATCTAGTACTGATGCTCTGCCTTTTCCTGATCTCCAATGACAGCACAGCTCTAGACTCCTGGCTGGAAAACCAGGATGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS GCA 90 bp | CATGTGGGCAAAAAGCAAACCAAAGTTCAGGAGTCCTGCAAGCCATaGAAGTTGGGTCAGACTTCATCAATCCAAACACTTCTGGGACTG | + |
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Preference number: 5 (lower is better) Translates to: HVGKKQTKVQESCKP*KLGQTSSIQTLLGL Trigger: CAGTCCCAGAAGTGTTTGGATTGATGAAGTCTGACCCAACTTGCATGGCTTGCAGGACTCCTGAACTTTGGTTTGCTTTTTGCCCACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS GCA 90 bp | GCAGGCAGACATGTGGGCAAAAAGCAAACCAAAGTTCAGGAGTCCTaGAAGCCATGCAAGTTGGGTCAGACTTCATCAATCCAAACACTT | + |
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Preference number: 5 (lower is better) Translates to: AGRHVGKKQTKVQES*KPCKLGQTSSIQTL Trigger: AAGTGTTTGGATTGATGAAGTCTGACCCAACTTGCATGGCTTGCAGGACTCCTGAACTTTGGTTTGCTTTTTGCCCACATGTCTGCCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CCA 90 bp | GTGCTGTCATTGGAGATCAGGAAAAGGCAGAGCATCAGTACTAGATaGGCAGTATGCAGGCAGACATGTGGGCAAAAAGCAAACCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: VLSLEIRKRQSISTR*AVCRQTCGQKANQS Trigger: ACTTTGGTTTGCTTTTTGCCCACATGTCTGCCTGCATACTGCCCATCTAGTACTGATGCTCTGCCTTTTCCTGATCTCCAATGACAGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CCA 90 bp | CATAGCCAGAAGCGTTGTTGTATTAACAGCACCCAGCACAGTGTATaGCATACAATCACACTGAAGAAGTGTCAGCGTCTTCCTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: HSQKRCCINSTQHSV*HTITLKKCQRLPSF Trigger: AAAGGAAGGAAGACGCTGACACTTCTTCAGTGTGATTGTATGCCATACACTGTGCTGGGTGCTGTTAATACAACAACGCTTCTGGCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414886.5 |
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| CDS CCA 90 bp | GATTCACTGAAATCCTTCCTCATCATTGGGTGGTTAATTTCAGCATaGTTCCCAAATCCTTGCTGGCCAAAGAGCATGTGGACCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: DSLKSFLIIGWLISA*FPNPCWPKSMWTRR Trigger: TCTTCTGGTCCACATGCTCTTTGGCCAGCAAGGATTTGGGAACCATGCTGAAATTAACCACCCAATGATGAGGAAGGATTTCAGTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS TCA 90 bp | CATGCAAGTTGGGTCAGACTTCATCAATCCAAACACTTCTGGGACTaGGAGCCGACTACATGCTCGCTGCTTTATTTTCATGTTCATTCT | + |
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Preference number: 5 (lower is better) Translates to: HASWVRLHQSKHFWD*EPTTCSLLYFHVHS Trigger: AGAATGAACATGAAAATAAAGCAGCGAGCATGTAGTCGGCTCTCAGTCCCAGAAGTGTTTGGATTGATGAAGTCTGACCCAACTTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS TCA 90 bp | TCAAGCTCTCAGCCAGATTTCTTCTCTGGACTCAGCCATGAAGGTTaGAAACTCCACAGAGATTTGCAGGTTGAAAGTTGGAGTTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SSSQPDFFSGLSHEG*KLHRDLQVESWSFC Trigger: ACAGAAACTCCAACTTTCAACCTGCAAATCTCTGTGGAGTTTTCAACCTTCATGGCTGAGTCCAGAGAAGAAATCTGGCTGAGAGCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS TCA 90 bp | CACTTCACCATTCATCAGGTTTGTCCTTATTCCCAGGGTCTAGTATaGTCACAACCACATCCACATTTTCCAGCAGAAGACCAGACAAAT | + |
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Preference number: 5 (lower is better) Translates to: HFTIHQVCPYSQGLV*SQPHPHFPAEDQTN Trigger: ATTTGTCTGGTCTTCTGCTGGAAAATGTGGATGTGGTTGTGATCATACTAGACCCTGGGAATAAGGACAAACCTGATGAATGGTGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647942.1 |
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| CDS TCA 90 bp | CACAACGATTCCAGACATCCATCACTGCTAAAAGGGAACCACAAATaGTCTGTGAACCACTATATATTGATTACCCATGTAGTACAAGTG | + |
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Preference number: 5 (lower is better) Translates to: HNDSRHPSLLKGNHK*SVNHYILITHVVQV Trigger: CACTTGTACTACATGGGTAATCAATATATAGTGGTTCACAGATCATTTGTGGTTCCCTTTTAGCAGTGATGGATGTCTGGAATCGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000449075.2 ENST00000647942.1 ENST00000661786.1 ENST00000669120.1 |
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| CDS CCA 72 bp | GTGCGGTTCTGCGAGGCGCTCCACGATCCCGCCCCCTaGCATGGCAGCACCTACCGGCGGCGCGAACTCGGC | + |
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Preference number: 6 (lower is better) Translates to: VRFCEALHDPAP*HGSTYRRRELG Trigger: GCCGAGTTCGCGCCGCCGGTAGGTGCTGCCATGCCAGGGGGCGGGATCGTGGAGCGCCTCGCAGAACCGCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS CCA 72 bp | GTTCTGCGAGGCGCTCCACGATCCCGCCCCCTGGCATaGCAGCACCTACCGGCGGCGCGAACTCGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VLRGAPRSRPLA*QHLPAARTRLL Trigger: CAGCAGCCGAGTTCGCGCCGCCGGTAGGTGCTGCCATGCCAGGGGGCGGGATCGTGGAGCGCCTCGCAGAAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414886.5 ENST00000449819.1 |
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| CDS GCA 72 bp | GCCACCGGCGGCGCGAACTCGGCTGCTGTGGGCTGCTaGGCGCTCTCGCCTTTGTCAGTTTCATCAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: ATGGANSAAVGC*ALSPLSVSSAG Trigger: GCCGGCTGATGAAACTGACAAAGGCGAGAGCGCGCAGCAGCCCACAGCAGCCGAGTTCGCGCCGCCGGTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661786.1 |
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| CDS GCA 72 bp | CCAGCCACCGGCGGCGCGAACTCGGCTGCTGTGGGCTaGTGCGCGCTCTCGCCTTTGTCAGTTTCATCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PATGGANSAAVG*CALSPLSVSSA Trigger: GGCTGATGAAACTGACAAAGGCGAGAGCGCGCAGCAGCCCACAGCAGCCGAGTTCGCGCCGCCGGTGGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661786.1 |
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| CDS GCA 72 bp | GTGTCTGAGTCCAGCCACCGGCGGCGCGAACTCGGCTaGTGTGGGCTGCTGCGCGCTCTCGCCTTTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: VSESSHRRRELG*CGLLRALAFVS Trigger: ACTGACAAAGGCGAGAGCGCGCAGCAGCCCACAGCAGCCGAGTTCGCGCCGCCGGTGGCTGGACTCAGACAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661786.1 |
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| CDS CAA 72 bp | AACTCGGCTGCTGTGGGCTGCTGCGCGCTCTCGCCTTaGTCAGTTTCATCAGCCGGCGTTTCAGCTGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: NSAAVGCCALSP*SVSSAGVSAAR Trigger: GCGCGCAGCTGAAACGCCGGCTGATGAAACTGACAAAGGCGAGAGCGCGCAGCAGCCCACAGCAGCCGAGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661786.1 |
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| CDS GCA 72 bp | CGGAGAGATGGCTTTGTTTTTGCTTTCGTGCGGTTCTaGGAGGCGCTCCACGATCCCGCCCCCTGGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: RRDGFVFAFVRF*EALHDPAPWHG Trigger: GCCATGCCAGGGGGCGGGATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS GCA 72 bp | TTCTGCTCCGGAGAGATGGCTTTGTTTTTGCTTTCGTaGGGTTCTGCGAGGCGCTCCACGATCCCGCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: FCSGEMALFLLS*GSARRSTIPPP Trigger: AGGGGGCGGGATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS CAA 90 bp | CGGCCACGTCTGTTCTATTTCTGCTCCGGAGAGATGGCTTTGTTTTaGCTTTCGTGCGGTTCTGCGAGGCGCTCCACGATCCCGCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: RPRLFYFCSGEMALF*LSCGSARRSTIPPP Trigger: AGGGGGCGGGATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACAGACGTGGCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS CAA 90 bp | CCTCCTTGCCGAGGAGCTGGTGGACACTTGGTGAGCGTAGGTTTCTaGTCCCTAAGCTGTGTATCCAGGCATGCTCCCAGAAGGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PPCRGAGGHLVSVGF*SLSCVSRHAPRRWC Trigger: GCACCACCTTCTGGGAGCATGCCTGGATACACAGCTTAGGGACAAGAAACCTACGCTCACCAAGTGTCCACCAGCTCCTCGGCAAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647942.1 |
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| CDS CAA 72 bp | GTCTGGCCAAGACCTGCTGTTAGGGGCCAAAGTCATTaGTTGGGTATTGCCGGACACCCAGTTGGCCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: VWPRPAVRGQSH*LGIAGHPVGPA Trigger: CGCTGGGCCAACTGGGTGTCCGGCAATACCCAACAAATGACTTTGGCCCCTAACAGCAGGTCTTGGCCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 ENST00000647942.1 ENST00000648779.1 ENST00000661786.1 ENST00000669120.1 |
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| CDS CAA 90 bp | TTTCCCCGGCCACGTCTGTTCTATTTCTGCTCCGGAGAGATGGCTTaGTTTTTGCTTTCGTGCGGTTCTGCGAGGCGCTCCACGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: FPRPRLFYFCSGEMA*FLLSCGSARRSTIP Trigger: CGGGATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACAGACGTGGCCGGGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS CCA 72 bp | GTGAAAATCCAGAGAGAAGCACCTTGGAACCCAAACTaGAGCGTGATGTGTCTGAGTCCAGCCACCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: VKIQREAPWNPN*SVMCLSPATGG Trigger: GCCGCCGGTGGCTGGACTCAGACACATCACGCTCCAGTTTGGGTTCCAAGGTGCTTCTCTCTGGATTTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661786.1 |
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| CDS CCA 72 bp | GGCCAAGACCTGCTGTTAGGGGCCAAAGTCATTTGTTaGGTATTGCCGGACACCCAGTTGGCCCAGCGTAAT | + |
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Preference number: 6 (lower is better) Translates to: GQDLLLGAKVIC*VLPDTQLAQRN Trigger: ATTACGCTGGGCCAACTGGGTGTCCGGCAATACCCAACAAATGACTTTGGCCCCTAACAGCAGGTCTTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 ENST00000647942.1 ENST00000648779.1 ENST00000661786.1 ENST00000669120.1 |
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| CDS CAA 72 bp | CGAGGAGCTGGTGGACACTTGGTGAGCGTAGGTTTCTaGTCCCTAAGCTGTGTATCCAGGCATGCTCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RGAGGHLVSVGF*SLSCVSRHAPR Trigger: TCTGGGAGCATGCCTGGATACACAGCTTAGGGACAAGAAACCTACGCTCACCAAGTGTCCACCAGCTCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647942.1 |
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| CDS CAA 72 bp | CCACGTCTGTTCTATTTCTGCTCCGGAGAGATGGCTTaGTTTTTGCTTTCGTGCGGTTCTGCGAGGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRLFYFCSGEMA*FLLSCGSARRS Trigger: GGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACAGACGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS CAA 90 bp | CCCTCCTCCTTTGAAGCCACCGCACGTGTTGTCTCTCCCATTTCTTaGGCAGCCAATTGGCCTTCCATATCTCGGACTCCATATCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSSFEATARVVSPIS*AANWPSISRTPYPG Trigger: TCCTGGATATGGAGTCCGAGATATGGAAGGCCAATTGGCTGCCAAAGAAATGGGAGAGACAACACGTGCGGTGGCTTCAAAGGAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414886.5 |
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| CDS GCA 72 bp | TGTTCTATTTCTGCTCCGGAGAGATGGCTTTGTTTTTaGTTTCGTGCGGTTCTGCGAGGCGCTCCACGATCC | + |
|
Preference number: 6 (lower is better) Translates to: CSISAPERWLCF*FRAVLRGAPRS Trigger: GGATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS CAA 72 bp | CTGTTCTATTTCTGCTCCGGAGAGATGGCTTTGTTTTaGCTTTCGTGCGGTTCTGCGAGGCGCTCCACGATC | + |
|
Preference number: 6 (lower is better) Translates to: LFYFCSGEMALF*LSCGSARRSTI Trigger: GATCGTGGAGCGCCTCGCAGAACCGCACGAAAGCAAAAACAAAGCCATCTCTCCGGAGCAGAAATAGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 |
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| CDS CAA 72 bp | GACCTGCTGTTAGGGGCCAAAGTCATTTGTTGGGTATaGCCGGACACCCAGTTGGCCCAGCGTAATCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: DLLLGAKVICWV*PDTQLAQRNQS Trigger: TGATTGATTACGCTGGGCCAACTGGGTGTCCGGCAATACCCAACAAATGACTTTGGCCCCTAACAGCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 ENST00000647942.1 ENST00000648779.1 ENST00000661786.1 ENST00000669120.1 |
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| CDS CAA 72 bp | GTTTTACTCCCTCCTTGCCGAGGAGCTGGTGGACACTaGGTGAGCGTAGGTTTCTTGTCCCTAAGCTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VLLPPCRGAGGH*VSVGFLSLSCV Trigger: TACACAGCTTAGGGACAAGAAACCTACGCTCACCAAGTGTCCACCAGCTCCTCGGCAAGGAGGGAGTAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647942.1 |
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| CDS CAA 90 bp | TGGGTATTGCCGGACACCCAGTTGGCCCAGCGTAATCAATCATTTTaGGCAAGGCAGGTGAAAATCCAGAGAGAAGCACCTTGGAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: WVLPDTQLAQRNQSF*ARQVKIQREAPWNP Trigger: TGGGTTCCAAGGTGCTTCTCTCTGGATTTTCACCTGCCTTGCCAAAAATGATTGATTACGCTGGGCCAACTGGGTGTCCGGCAATACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 ENST00000647942.1 ENST00000648779.1 ENST00000661786.1 ENST00000669120.1 |
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| CDS CAA 90 bp | TCTGGCCAAGACCTGCTGTTAGGGGCCAAAGTCATTTGTTGGGTATaGCCGGACACCCAGTTGGCCCAGCGTAATCAATCATTTTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGQDLLLGAKVICWV*PDTQLAQRNQSFLA Trigger: TGCCAAAAATGATTGATTACGCTGGGCCAACTGGGTGTCCGGCAATACCCAACAAATGACTTTGGCCCCTAACAGCAGGTCTTGGCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 ENST00000647942.1 ENST00000648779.1 ENST00000661786.1 ENST00000669120.1 |
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| CDS CCA 72 bp | ATCCGGGAGAGAGACCTTTCCAATCAACCTGTGTTGTaGGGGTTGCAAAAACTCCCTCCGAGAAAGCGATTG | + |
|
Preference number: 6 (lower is better) Translates to: IRERDLSNQPVL*GLQKLPPRKRL Trigger: CAATCGCTTTCTCGGAGGGAGTTTTTGCAACCCCCACAACACAGGTTGATTGGAAAGGTCTCTCTCCCGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS CAA 72 bp | GTTATCCGGGAGAGAGACCTTTCCAATCAACCTGTGTaGTGGGGGTTGCAAAAACTCCCTCCGAGAAAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: VIRERDLSNQPV*WGLQKLPPRKR Trigger: TCGCTTTCTCGGAGGGAGTTTTTGCAACCCCCACAACACAGGTTGATTGGAAAGGTCTCTCTCCCGGATAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS CAA 90 bp | CAGTCATCCTGGTTTTCCAGCCAGGAGTCTAGAGCTGTGCTGTCATaGGAGATCAGGAAAAGGCAGAGCATCAGTACTAGATGGGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: QSSWFSSQESRAVLS*EIRKRQSISTRWAV Trigger: TACTGCCCATCTAGTACTGATGCTCTGCCTTTTCCTGATCTCCAATGACAGCACAGCTCTAGACTCCTGGCTGGAAAACCAGGATGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CAA 90 bp | GTTATCCGGGAGAGAGACCTTTCCAATCAACCTGTGTTGTGGGGGTaGCAAAAACTCCCTCCGAGAAAGCGATTGGAGAGAGGCTTTATG | + |
|
Preference number: 6 (lower is better) Translates to: VIRERDLSNQPVLWG*QKLPPRKRLERGFM Trigger: CATAAAGCCTCTCTCCAATCGCTTTCTCGGAGGGAGTTTTTGCAACCCCCACAACACAGGTTGATTGGAAAGGTCTCTCTCCCGGATAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS TCA 72 bp | CAGGCATGCTCCCAGAAGGTGGTGCAAATTCACTGCTaGTACAGTAAAGGAGGACGTGGCTTTCTTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QACSQKVVQIHC*YSKGGRGFLFQ Trigger: CTGGAAAAGAAAGCCACGTCCTCCTTTACTGTATCAGCAGTGAATTTGCACCACCTTCTGGGAGCATGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647942.1 |
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| CDS GCA 72 bp | AGAGAGACCTTTCCAATCAACCTGTGTTGTGGGGGTTaGAAAAACTCCCTCCGAGAAAGCGATTGGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RETFPINLCCGG*KNSLRESDWRE Trigger: CTCTCTCCAATCGCTTTCTCGGAGGGAGTTTTTGCAACCCCCACAACACAGGTTGATTGGAAAGGTCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS CCA 72 bp | CCAAAGTCATTTGTTGGGTATTGCCGGACACCCAGTTaGCCCAGCGTAATCAATCATTTTTGGCAAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PKSFVGYCRTPS*PSVINHFWQGR Trigger: CCTGCCTTGCCAAAAATGATTGATTACGCTGGGCCAACTGGGTGTCCGGCAATACCCAACAAATGACTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 ENST00000647942.1 ENST00000648779.1 ENST00000661786.1 ENST00000669120.1 |
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| CDS CCA 72 bp | GTGAAAATCCAGAGAGAAGCACCTTGGAACCCAAACTaGAGCGTGATGTGTCTGAGTCCAGCCACACAGATA | + |
|
Preference number: 6 (lower is better) Translates to: VKIQREAPWNPN*SVMCLSPATQI Trigger: TATCTGTGTGGCTGGACTCAGACACATCACGCTCCAGTTTGGGTTCCAAGGTGCTTCTCTCTGGATTTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647942.1 |
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| CDS CAA 72 bp | GCCAAAGTCATTTGTTGGGTATTGCCGGACACCCAGTaGGCCCAGCGTAATCAATCATTTTTGGCAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AKVICWVLPDTQ*AQRNQSFLARQ Trigger: CTGCCTTGCCAAAAATGATTGATTACGCTGGGCCAACTGGGTGTCCGGCAATACCCAACAAATGACTTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000414886.5 ENST00000449075.2 ENST00000449819.1 ENST00000647942.1 ENST00000648779.1 ENST00000661786.1 ENST00000669120.1 |
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| CDS CAA 72 bp | GAGAGAGACCTTTCCAATCAACCTGTGTTGTGGGGGTaGCAAAAACTCCCTCCGAGAAAGCGATTGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ERDLSNQPVLWG*QKLPPRKRLER Trigger: TCTCTCCAATCGCTTTCTCGGAGGGAGTTTTTGCAACCCCCACAACACAGGTTGATTGGAAAGGTCTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS CAA 90 bp | GGCAAAAAGCAAACCAAAGTTCAGGAGTCCTGCAAGCCATGCAAGTaGGGTCAGACTTCATCAATCCAAACACTTCTGGGACTGAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GKKQTKVQESCKPCK*GQTSSIQTLLGLRA Trigger: GGCTCTCAGTCCCAGAAGTGTTTGGATTGATGAAGTCTGACCCAACTTGCATGGCTTGCAGGACTCCTGAACTTTGGTTTGCTTTTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS TCA 72 bp | ACAGCACCCAGCACAGTGTATGGCATACAATCACACTaGAGAAGTGTCAGCGTCTTCCTTCCTTTCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TAPSTVYGIQSH*RSVSVFLPFSL Trigger: GAGACTGAAAGGAAGGAAGACGCTGACACTTCTTCAGTGTGATTGTATGCCATACACTGTGCTGGGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414886.5 |
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| CDS GCA 72 bp | GAGTCCAGCCACCTAATGATGTTTGCTTCACTGCCTTaGTCGATTGTGTTCACCAGGACGGCAGGAAATATT | + |
|
Preference number: 6 (lower is better) Translates to: ESSHLMMFASLP*SIVFTRTAGNI Trigger: AATATTTCCTGCCGTCCTGGTGAACACAATCGAGCAAGGCAGTGAAGCAAACATCATTAGGTGGCTGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449075.2 |
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| CDS GCA 72 bp | GCTGGCCAAAGAGCATGTGGACCAGAAGAGGTGAAATaGTCTGATCCCTTTCTTGATGCTCTGTTCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGQRACGPEEVK*SDPFLDALFFC Trigger: ACAGAAGAACAGAGCATCAAGAAAGGGATCAGAGCATTTCACCTCTTCTGGTCCACATGCTCTTTGGCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CCA 72 bp | GGGTGGTTAATTTCAGCATGGTTCCCAAATCCTTGCTaGCCAAAGAGCATGTGGACCAGAAGAGGTGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: GWLISAWFPNPC*PKSMWTRRGEM Trigger: CATTTCACCTCTTCTGGTCCACATGCTCTTTGGCCAGCAAGGATTTGGGAACCATGCTGAAATTAACCACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CCA 72 bp | TTGGAGATCAGGAAAAGGCAGAGCATCAGTACTAGATaGGCAGTATGCAGGCAGACATGTGGGCAAAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LEIRKRQSISTR*AVCRQTCGQKA Trigger: TGCTTTTTGCCCACATGTCTGCCTGCATACTGCCCATCTAGTACTGATGCTCTGCCTTTTCCTGATCTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CCA 72 bp | GGTTTTCCAGCCAGGAGTCTAGAGCTGTGCTGTCATTaGAGATCAGGAAAAGGCAGAGCATCAGTACTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GFPARSLELCCH*RSGKGRASVLD Trigger: ATCTAGTACTGATGCTCTGCCTTTTCCTGATCTCCAATGACAGCACAGCTCTAGACTCCTGGCTGGAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CCA 72 bp | AATAGCAGGAGCAGAATATTCAGCACACAGTCATCCTaGTTTTCCAGCCAGGAGTCTAGAGCTGTGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: NSRSRIFSTQSS*FSSQESRAVLS Trigger: TGACAGCACAGCTCTAGACTCCTGGCTGGAAAACCAGGATGACTGTGTGCTGAATATTCTGCTCCTGCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CAA 90 bp | TCACCAGGACGGCAGGCTATTAAAATGTCAAGGCACATTGAATTGTaGTTATCCGGGAGAGAGACCTTTCCAATCAACCTGTGTTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPGRQAIKMSRHIEL*LSGRETFPINLCCG Trigger: CCCACAACACAGGTTGATTGGAAAGGTCTCTCTCCCGGATAACAACAATTCAATGTGCCTTGACATTTTAATAGCCTGCCGTCCTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS GCA 72 bp | ATTGGGTGGTTAATTTCAGCATGGTTCCCAAATCCTTaGTGGCCAAAGAGCATGTGGACCAGAAGAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: IGWLISAWFPNP*WPKSMWTRRGE Trigger: TTCACCTCTTCTGGTCCACATGCTCTTTGGCCAGCAAGGATTTGGGAACCATGCTGAAATTAACCACCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS GCA 72 bp | CATGTGGGCAAAAAGCAAACCAAAGTTCAGGAGTCCTaGAAGCCATGCAAGTTGGGTCAGACTTCATCAATC | + |
|
Preference number: 6 (lower is better) Translates to: HVGKKQTKVQES*KPCKLGQTSSI Trigger: GATTGATGAAGTCTGACCCAACTTGCATGGCTTGCAGGACTCCTGAACTTTGGTTTGCTTTTTGCCCACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CCA 72 bp | GTGAAAATCCAGAGAGAAGCACCTTGGAACCCAAACTaGAGCGTGATGTGTCTGAGTCCAGCCACAAATATT | + |
|
Preference number: 6 (lower is better) Translates to: VKIQREAPWNPN*SVMCLSPATNI Trigger: AATATTTGTGGCTGGACTCAGACACATCACGCTCCAGTTTGGGTTCCAAGGTGCTTCTCTCTGGATTTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414886.5 ENST00000449819.1 |
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| CDS CCA 72 bp | AAACCAAAGTTCAGGAGTCCTGCAAGCCATGCAAGTTaGGTCAGACTTCATCAATCCAAACACTTCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KPKFRSPASHAS*VRLHQSKHFWD Trigger: GTCCCAGAAGTGTTTGGATTGATGAAGTCTGACCCAACTTGCATGGCTTGCAGGACTCCTGAACTTTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CAA 72 bp | CAAACCAAAGTTCAGGAGTCCTGCAAGCCATGCAAGTaGGGTCAGACTTCATCAATCCAAACACTTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QTKVQESCKPCK*GQTSSIQTLLG Trigger: TCCCAGAAGTGTTTGGATTGATGAAGTCTGACCCAACTTGCATGGCTTGCAGGACTCCTGAACTTTGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS TCA 72 bp | TGGGTCAGACTTCATCAATCCAAACACTTCTGGGACTaGGAGCCGACTACATGCTCGCTGCTTTATTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WVRLHQSKHFWD*EPTTCSLLYFH Trigger: ATGAAAATAAAGCAGCGAGCATGTAGTCGGCTCTCAGTCCCAGAAGTGTTTGGATTGATGAAGTCTGACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CCA 72 bp | AAATCCTTCCTCATCATTGGGTGGTTAATTTCAGCATaGTTCCCAAATCCTTGCTGGCCAAAGAGCATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KSFLIIGWLISA*FPNPCWPKSMW Trigger: CCACATGCTCTTTGGCCAGCAAGGATTTGGGAACCATGCTGAAATTAACCACCCAATGATGAGGAAGGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CAA 90 bp | CTGGACTCAGCCATGAAGGTTGAAAACTCCACAGAGATTTGCAGGTaGAAAGTTGGAGTTTCTGTAGTATACAAAGGCTTCCTTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LDSAMKVENSTEICR*KVGVSVVYKGFLSG Trigger: CCCTGAAAGGAAGCCTTTGTATACTACAGAAACTCCAACTTTCAACCTGCAAATCTCTGTGGAGTTTTCAACCTTCATGGCTGAGTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CAA 90 bp | TGTTCACCAGGACGGCAGGCTATTAAAATGTCAAGGCACATTGAATaGTTGTTATCCGGGAGAGAGACCTTTCCAATCAACCTGTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSPGRQAIKMSRHIE*LLSGRETFPINLCC Trigger: ACAACACAGGTTGATTGGAAAGGTCTCTCTCCCGGATAACAACAATTCAATGTGCCTTGACATTTTAATAGCCTGCCGTCCTGGTGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS CAA 90 bp | GATTGTGTTCACCAGGACGGCAGGCTATTAAAATGTCAAGGCACATaGAATTGTTGTTATCCGGGAGAGAGACCTTTCCAATCAACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DCVHQDGRLLKCQGT*NCCYPGERPFQSTC Trigger: ACAGGTTGATTGGAAAGGTCTCTCTCCCGGATAACAACAATTCAATGTGCCTTGACATTTTAATAGCCTGCCGTCCTGGTGAACACAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS TCA 72 bp | GACTACATGCTCGCTGCTTTATTTTCATGTTCATTCTaGACAACACCACTGTGGGGTGGAAATCACCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: DYMLAALFSCSF*TTPLWGGNHHS Trigger: AGAGTGGTGATTTCCACCCCACAGTGGTGTTGTTCAGAATGAACATGAAAATAAAGCAGCGAGCATGTAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000414886.5 ENST00000648779.1 |
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| CDS CAA 72 bp | CGGCAGGCTATTAAAATGTCAAGGCACATTGAATTGTaGTTATCCGGGAGAGAGACCTTTCCAATCAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RQAIKMSRHIEL*LSGRETFPINL Trigger: CAGGTTGATTGGAAAGGTCTCTCTCCCGGATAACAACAATTCAATGTGCCTTGACATTTTAATAGCCTGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS CAA 90 bp | AAAGTGGGGATAATAACAGTACCTAATGATGTTTGCTTCACTGCCTaGCTCGATTGTGTTCACCAGGACGGCAGGAAATATTTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KVGIITVPNDVCFTA*LDCVHQDGRKYLAF Trigger: GAAAGCCAAATATTTCCTGCCGTCCTGGTGAACACAATCGAGCAAGGCAGTGAAGCAAACATCATTAGGTACTGTTATTATCCCCACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS TCA 72 bp | ATTCATCAGGTTTGTCCTTATTCCCAGGGTCTAGTATaGTCACAACCACATCCACATTTTCCAGCAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: IHQVCPYSQGLV*SQPHPHFPAED Trigger: GTCTTCTGCTGGAAAATGTGGATGTGGTTGTGATCATACTAGACCCTGGGAATAAGGACAAACCTGATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647942.1 |
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| CDS GCA 72 bp | TGTAAAGTGGGGATAATAACAGTACCTAATGATGTTTaGTTCACTGCCTTGCTCGATTGTGTTCACCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CKVGIITVPNDV*FTALLDCVHQD Trigger: GTCCTGGTGAACACAATCGAGCAAGGCAGTGAAGCAAACATCATTAGGTACTGTTATTATCCCCACTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CAA 72 bp | ATAATAACAGTACCTAATGATGTTTGCTTCACTGCCTaGCTCGATTGTGTTCACCAGGACGGCAGGAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: IITVPNDVCFTA*LDCVHQDGRKY Trigger: ATATTTCCTGCCGTCCTGGTGAACACAATCGAGCAAGGCAGTGAAGCAAACATCATTAGGTACTGTTATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS CAA 72 bp | GCCATGAAGGTTGAAAACTCCACAGAGATTTGCAGGTaGAAAGTTGGAGTTTCTGTAGTATACAAAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AMKVENSTEICR*KVGVSVVYKGF Trigger: GAAGCCTTTGTATACTACAGAAACTCCAACTTTCAACCTGCAAATCTCTGTGGAGTTTTCAACCTTCATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648779.1 |
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| CDS TCA 72 bp | TCAGGAAGGAACTGGACAGAATCTTGTTTAATGGTCTaGCAAAATGAATCACAACGATTCCAGACATCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SGRNWTESCLMV*QNESQRFQTSI Trigger: GATGGATGTCTGGAATCGTTGTGATTCATTTTGTCAGACCATTAAACAAGATTCTGTCCAGTTCCTTCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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| CDS CAA 72 bp | GTGGAAATCACCACTCTGTTTGTTCAAATGAAGATATaGAGTTTCAGCAATGTTAAGGCAGTTGTTCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VEITTLFVQMKI*SFSNVKAVVQG Trigger: GCCTTGAACAACTGCCTTAACATTGCTGAAACTCAATATCTTCATTTGAACAAACAGAGTGGTGATTTCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414886.5 ENST00000648779.1 |
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| CDS CAA 72 bp | AAAATGCCATCTTCTCAAACAGGTATTGGTGGCTTCTaGCTTTTCCATTTATGGATAACTGCAATATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KMPSSQTGIGGF*LFHLWITAIWP Trigger: AGGCCATATTGCAGTTATCCATAAATGGAAAAGCAAGAAGCCACCAATACCTGTTTGAGAAGATGGCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669120.1 |
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