RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THOP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172009

Ensembl transcript IDs: ENST00000307741.11, ENST00000395212.8, ENST00000585338.1, ENST00000585673.5, ENST00000586677.5, ENST00000586780.1, ENST00000587401.5, ENST00000587468.1, ENST00000589087.5, ENST00000590533.1, ENST00000590970.5, ENST00000591149.5, ENST00000591363.5, ENST00000592639.1

Found 545 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCGCTCAGCCACCCTGCCAGTCCCAGGCACTGTGCCAGAGCCTaGCCCATCCTGTGCCGGGGGCTAAGGCACCAGGGCGGCGGGAGC +
Preference number: 1 (lower is better)
Translates to: QPLSHPASPRHCARA*PILCRGLRHQGGGS
Trigger: GCTCCCGCCGCCCTGGTGCCTTAGCCCCCGGCACAGGATGGGGCAGGCTCTGGCACAGTGCCTGGGACTGGCAGGGTGGCTGAGCGGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR GCA 90 bp AGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCACTGTaGCAGAGCCTGCCCCATCCTGTGCCGGGGGCTAAGGCACCAGGG +
Preference number: 1 (lower is better)
Translates to: RGKTAAQPPCQSQAL*QSLPHPVPGAKAPG
Trigger: CCCTGGTGCCTTAGCCCCCGGCACAGGATGGGGCAGGCTCTGGCACAGTGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR CCA 90 bp GCCTCGGGAAGCAGGGTCACAGGTTCTGCTGACCAGCGTCCTTCGTaGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGGG +
Preference number: 1 (lower is better)
Translates to: ASGSRVTGSADQRPS*RTKTGEGRSQGTRG
Trigger: CCCCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACCTGTGACCCTGCTTCCCGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR TCA 90 bp TGGATGGTCCAGGCCATCCGCCCACGGCCCAGCAGCCCAAGGCTGTaGCCCCAGCTCTGCTGTGATGGGCCAGGCTGTGTGTGTGACAAG +
Preference number: 1 (lower is better)
Translates to: WMVQAIRPRPSSPRL*PQLCCDGPGCVCDK
Trigger: CTTGTCACACACACAGCCTGGCCCATCACAGCAGAGCTGGGGTCACAGCCTTGGGCTGCTGGGCCGTGGGCGGATGGCCTGGACCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 90 bp GATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTaGGGACAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCC +
Preference number: 1 (lower is better)
Translates to: DALRTPSLAGWATTG*GQTMTRGKTAAQPP
Trigger: GGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR CCA 90 bp ATCCGGCAACTAAGCCCAGTTGGTGACTTCCAGGGGAGTGGGGTGTaGATGGTCCAGGCCATCCGCCCACGGCCCAGCAGCCCAAGGCTG +
Preference number: 1 (lower is better)
Translates to: IRQLSPVGDFQGSGV*MVQAIRPRPSSPRL
Trigger: CAGCCTTGGGCTGCTGGGCCGTGGGCGGATGGCCTGGACCATCCACACCCCACTCCCCTGGAAGTCACCAACTGGGCTTAGTTGCCGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR GCA 90 bp GGACGCCCAGCTCCCTGGGGAACAGGGCCCTGGACCGAGACTCTGTaGTACTACCTCCACATCCCTGGGTGTCCACAGAGCAGGGGACAT +
Preference number: 1 (lower is better)
Translates to: GRPAPWGTGPWTETL*YYLHIPGCPQSRGH
Trigger: ATGTCCCCTGCTCTGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCTGTTCCCCAGGGAGCTGGGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR TCA 90 bp CCCAGCTCTGCTGTGATGGGCCAGGCTGTGTGTGTGACAAGGCTGTaGTGGCCCAGGGCCCAGCTGGGGTGCTCTTGCACAACTGGGACT +
Preference number: 1 (lower is better)
Translates to: PSSAVMGQAVCVTRL*WPRAQLGCSCTTGT
Trigger: AGTCCCAGTTGTGCAAGAGCACCCCAGCTGGGCCCTGGGCCATCACAGCCTTGTCACACACACAGCCTGGCCCATCACAGCAGAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR GCA 90 bp CCCCAAGGCCATGAGGATGAGGGCCATGGCCGAGCTTCCAGCAGCTaGCCTGGTTCACCTGGTTCACTTGTGTCCAACAGGAACCCCCAG +
Preference number: 1 (lower is better)
Translates to: PQGHEDEGHGRASSS*PGSPGSLVSNRNPQ
Trigger: CTGGGGGTTCCTGTTGGACACAAGTGAACCAGGTGAACCAGGGCAGCTGCTGGAAGCTCGGCCATGGCCCTCATCCTCATGGCCTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 90 bp CACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTaGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGCAAGACA +
Preference number: 1 (lower is better)
Translates to: HESPPDALRTPSLAG*ATTGWGQTMTRGKT
Trigger: TGTCTTGCCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR GCA 90 bp TATGGATTCCCGCCTCGCTGGCATAACCCTCCTGGCCACAGGCTGTaGCGTCCAGCTCTGCAAAGACAAGACTCACCCCTTAGCCCCCAG +
Preference number: 1 (lower is better)
Translates to: YGFPPRWHNPPGHRL*RPALQRQDSPLSPQ
Trigger: CTGGGGGCTAAGGGGTGAGTCTTGTCTTTGCAGAGCTGGACGGCACAGCCTGTGGCCAGGAGGGTTATGCCAGCGAGGCGGGAATCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 90 bp TCACTTGTGTCCAACAGGAACCCCCAGAGACTCTGCCTAGGAAGCTaGAGTGAGCCCGGCCTTCCCCTGTGGATGAGAGGGTGGGCAGCT +
Preference number: 1 (lower is better)
Translates to: SLVSNRNPQRLCLGS*SEPGLPLWMRGWAA
Trigger: AGCTGCCCACCCTCTCATCCACAGGGGAAGGCCGGGCTCACTCCAGCTTCCTAGGCAGAGTCTCTGGGGGTTCCTGTTGGACACAAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR GCA 90 bp GGTTCACCTGGTTCACTTGTGTCCAACAGGAACCCCCAGAGACTCTaGCTAGGAAGCTGGAGTGAGCCCGGCCTTCCCCTGTGGATGAGA +
Preference number: 1 (lower is better)
Translates to: GSPGSLVSNRNPQRL*LGSWSEPGLPLWMR
Trigger: TCTCATCCACAGGGGAAGGCCGGGCTCACTCCAGCTTCCTAGGCAGAGTCTCTGGGGGTTCCTGTTGGACACAAGTGAACCAGGTGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR GCA 90 bp CTCGCTGGCATAACCCTCCTGGCCACAGGCTGTGCCGTCCAGCTCTaGAAAGACAAGACTCACCCCTTAGCCCCCAGAGTTGGAAAGACA +
Preference number: 1 (lower is better)
Translates to: LAGITLLATGCAVQL*KDKTHPLAPRVGKT
Trigger: TGTCTTTCCAACTCTGGGGGCTAAGGGGTGAGTCTTGTCTTTGCAGAGCTGGACGGCACAGCCTGTGGCCAGGAGGGTTATGCCAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR TCA 90 bp GCGCACAGGGCCTGCCCTGACTTTCCAGACTCTCTGACCAGTGGAGCCTGGTCCGCCCCCACAAGGACCTaGGCCCCAATCCAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: AHRACPDFPDSLTSGAWSAPTRT*APIQGL
Trigger: CAGGCCCTGGATTGGGGCTCAGGTCCTTGTGGGGGC...GGACCAGGCTCCACTGGTCAGAGAGTCTGGAAAGTCAGGGCAGGCCCTGTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACCAGTCCCAGGCACTGTaGCAGAGCCTGCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDQSQAL*QSLPHP
Trigger: AGGATGGGGCAGGCTCTGGCACAGTGCCTGGGACTG...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR CCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGAGCGCAGGCCAGACTaGGCAGTCGCAGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRERRPD*AVAVPG
Trigger: GCCTGGCACTGCGACTGCCCAGTCTGGCCTGCGCTC...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR TCA 90 bp TCCTGGAGTGTTTGGGGAAACCCGGGTGCCCCCGGTGTGGGCATTTGGGAAGGCTGTGTGACAAGGCTGTaGTGGCCCAGGGCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: SWSVWGNPGAPGVGIWEGCVTRL*WPRAQL
Trigger: CAGCTGGGCCCTGGGCCATCACAGCCTTGTCACACA...GCCTTCCCAAATGCCCACACCGGGGGCACCCGGGTTTCCCCAAACACTCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCAGCCTGCCCCATCCTGTaGCGGGGGCTAAGGCACCAG +
Preference number: 2 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQAACPIL*RGLRHQ
Trigger: CTGGTGCCTTAGCCCCCGGCACAGGATGGGGCAGGC...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR GCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGACAGTCCCAGGCACTGTaGCAGAGCCTGCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRQSQAL*QSLPHP
Trigger: AGGATGGGGCAGGCTCTGGCACAGTGCCTGGGACTG...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR CCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCAGAGCGCAGGCCAGACTaGGCAGTCGCAGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQAERRPD*AVAVPG
Trigger: GCCTGGCACTGCGACTGCCCAGTCTGGCCTGCGCTC...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR CCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGGTCTTGCTCGGGAGGTaGGGACACAGCCGACAGCTA +
Preference number: 2 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGVLLGR*GHSRQL
Trigger: TAGCTGTCGGCTGTGTCCCCACCTCCCGAGCAAGAC...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGCGAGCTTCCAGCAGCTaGCCTGGTTCACCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGRASSS*PGSPGS
Trigger: TGAACCAGGTGAACCAGGGCAGCTGCTGGAAGCTCG...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR TCA 90 bp TGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCCACCCATAGGCCTCGGGGCACAGGGCCTGCCCTaGCTTTCCAGACTCTCTGAC +
Preference number: 2 (lower is better)
Translates to: CPNGGEDEADVWPPIGLGAQGLP*LSRLSD
Trigger: GTCAGAGAGTCTGGAAAGTCAGGGCAGGCCCTGTGC...CCCGAGGCCTATGGGTGGCCAGACATCCGCCTCGTCCTCACCTCCATTTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR CCA 90 bp GTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCAGTCACACTGACCTGGGCTaGGTGGGAATGGGACAGGAG +
Preference number: 2 (lower is better)
Translates to: VHGAEPGVRKVQSRPHGSHTDLG*VGMGQE
Trigger: CTCCTGTCCCATTCCCACCCAGCCCAGGTCAGTGTG...ACTGCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR TCA 90 bp TCCTGGAGTGTTTGGGGAAACCCGGGTGCCCCCGGTGTGGGCATTTGGGAAGGCACTTTCCAGACTCTCTaGCCAGTGGAGCCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: SWSVWGNPGAPGVGIWEGTFQTL*PVEPGP
Trigger: AGGACCAGGCTCCACTGGTCAGAGAGTCTGGAAAGT...GCCTTCCCAAATGCCCACACCGGGGGCACCCGGGTTTCCCCAAACACTCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp GCACAGCCCTCGGAGTCCTGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCGAAAGCCCTCCAGATaGCTTGAGGACGCCGTCTCT +
Preference number: 2 (lower is better)
Translates to: AQPSESCPNGGEDEADVWRKPSR*LEDAVS
Trigger: AGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCG...CCAGACATCCGCCTCGTCCTCACCTCCATTTGGACAGGACTCCGAGGGCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACACCTGGCCACAGGCTGTaGCGTCCAGCTCTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTPGHRL*RPALQR
Trigger: TCTTTGCAGAGCTGGACGGCACAGCCTGTGGCCAGG...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACATCCACCTCTGCCCAGTaGGGTCGGCTTTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTSTSAQ*GRLCLP
Trigger: TGGAAGGCAAAGCCGACCGCACTGGGCAGAGGTGGA...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR CCA 90 bp TGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCCACCCATAGGCCTCGGGATCTCTGAGCACTGTTaGAGGGTCCAGGAAGCGCCC +
Preference number: 2 (lower is better)
Translates to: CPNGGEDEADVWPPIGLGISEHC*RVQEAP
Trigger: GGGCGCTTCCTGGACCCTCCAACAGTGCTCAGAGAT...CCCGAGGCCTATGGGTGGCCAGACATCCGCCTCGTCCTCACCTCCATTTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp CTTCAGGTGCAAGCTATGGGACCCGCTCTGAGCTGTGAGTATCTGAAACGTGACGCCTGCCCCATCCTGTaGCGGGGGCTAAGGCACCAG +
Preference number: 2 (lower is better)
Translates to: LQVQAMGPALSCEYLKRDACPIL*RGLRHQ
Trigger: CTGGTGCCTTAGCCCCCGGCACAGGATGGGGCAGGC...GTCACGTTTCAGATACTCACAGCTCAGAGCGGGTCCCATAGCTTGCACCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp GTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCAGTAACCCCCAGAGACTCTaGCTAGGAAGCTGGAGTGAG +
Preference number: 2 (lower is better)
Translates to: VHGAEPGVRKVQSRPHGSNPQRL*LGSWSE
Trigger: CTCACTCCAGCTTCCTAGGCAGAGTCTCTGGGGGTT...ACTGCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp GCACAGCCCTCGGAGTCCTGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGAAGACTTTGCCATGTTaGCCACAGCCAGGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: AQPSESCPNGGEDEADVWKTLPC*PQPGEW
Trigger: CCACTCCCCTGGCTGTGGGCAACATGGCAAAGTCTT...CCAGACATCCGCCTCGTCCTCACCTCCATTTGGACAGGACTCCGAGGGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR CCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGGAGCGCAGGCCAGACTaGGCAGTCGCAGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVERRPD*AVAVPG
Trigger: GCCTGGCACTGCGACTGCCCAGTCTGGCCTGCGCTC...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR CCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTCCGTCTCTAGCCGGGTaGGCCACGACCGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSPSLAG*ATTGWG
Trigger: TCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGG...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR CCA 90 bp CTTCAGGTGCAAGCTATGGGACCCGCTCTGAGCTGTGAGTATCTGAAACGTGACCCCCAATCCAGGGCCTaGTGTGGCAACAGCCCGAGG +
Preference number: 2 (lower is better)
Translates to: LQVQAMGPALSCEYLKRDPQSRA*CGNSPR
Trigger: CCTCGGGCTGTTGCCACACCAGGCCCTGGATTGGGG...GTCACGTTTCAGATACTCACAGCTCAGAGCGGGTCCCATAGCTTGCACCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR GCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCCGAAAGCCCTCCAGATaGCTTGAGGACGCCGTCTCT +
Preference number: 2 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGRKPSR*LEDAVS
Trigger: AGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCG...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR GCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGCAGTCCCAGGCACTGTaGCAGAGCCTGCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVQSQAL*QSLPHP
Trigger: AGGATGGGGCAGGCTCTGGCACAGTGCCTGGGACTG...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR CCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGACAAAGACCAGGCCCTaGCAGCCACGAAAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVTKTRP*QPRKPS
Trigger: GGAGGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGT...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR TCA 90 bp CTTCAGGTGCAAGCTATGGGACCCGCTCTGAGCTGTGAGTATCTGAAACGTGACGCCGACAGCTATCCCTaGGGCATCTCTGAGCACTGT +
Preference number: 2 (lower is better)
Translates to: LQVQAMGPALSCEYLKRDADSYP*GISEHC
Trigger: ACAGTGCTCAGAGATGCCTCAGGGATAGCTGTCGGC...GTCACGTTTCAGATACTCACAGCTCAGAGCGGGTCCCATAGCTTGCACCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR TCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGGTGGGGACAGACAATaGCAAGAGGCAAGACAGCCG +
Preference number: 2 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSGGDRQ*QEARQP
Trigger: CGGCTGTCTTGCCTCTTGTCATTGTCTGTCCCCACC...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR CCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTTGGGCCACGACCGGGTaGGGACAGACAATGACAAGA +
Preference number: 2 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSWATTG*GQTMTR
Trigger: TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCA...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR CCA 72 bp GCCCAGTTGGTGACTTCCAGGGGAGTGGGGTGTGGATaGTCCAGGCCATCCGCCCACGGCCCAGCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: AQLVTSRGVGCG*SRPSAHGPAAQ
Trigger: TTGGGCTGCTGGGCCGTGGGCGGATGGCCTGGACCATCCACACCCCACTCCCCTGGAAGTCACCAACTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 72 bp CTAAGCCCAGTTGGTGACTTCCAGGGGAGTGGGGTGTaGATGGTCCAGGCCATCCGCCCACGGCCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: LSPVGDFQGSGV*MVQAIRPRPSS
Trigger: GCTGCTGGGCCGTGGGCGGATGGCCTGGACCATCCACACCCCACTCCCCTGGAAGTCACCAACTGGGCTTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR TCA 72 bp CAGGAACCCCCAGAGACTCTGCCTAGGAAGCTGGAGTaGGCCCGGCCTTCCCCTGTGGATGAGAGGGTGGGC +
Preference number: 3 (lower is better)
Translates to: QEPPETLPRKLE*ARPSPVDERVG
Trigger: GCCCACCCTCTCATCCACAGGGGAAGGCCGGGCTCACTCCAGCTTCCTAGGCAGAGTCTCTGGGGGTTCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 72 bp AGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTaGGGACAGACAATGACAAGAGGCAAGACAGCCGCT +
Preference number: 3 (lower is better)
Translates to: RTPSLAGWATTG*GQTMTRGKTAA
Trigger: AGCGGCTGTCTTGCCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR GCA 72 bp GCTCCCTGGGGAACAGGGCCCTGGACCGAGACTCTGTaGTACTACCTCCACATCCCTGGGTGTCCACAGAGC +
Preference number: 3 (lower is better)
Translates to: APWGTGPWTETL*YYLHIPGCPQS
Trigger: GCTCTGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCTGTTCCCCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 72 bp CCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTaGGCCACGACCGGGTGGGGACAGACAATGACAAGA +
Preference number: 3 (lower is better)
Translates to: PPDALRTPSLAG*ATTGWGQTMTR
Trigger: TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
3UTR-3UTR CAA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACAAGGGAGCCCCCAGACTaGCCATCTCCACCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTREPPD*PSPPLP
Trigger: GGGCAGAGGTGGAGATGGCAAGTCTGGGGGCTCCCT...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR CAA 90 bp GGTTCTGCTGACCAGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCGAGCATCCACTTGTCTaGCTCGGGAGGTGGGGACAC +
Preference number: 3 (lower is better)
Translates to: GSADQRPSWRTKTGEGRSEHPLV*LGRWGH
Trigger: GTGTCCCCACCTCCCGAGCAAGACAAGTGGATGCTC...GGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR GCA 72 bp CCGCCTCGCTGGCATAACCCTCCTGGCCACAGGCTGTaGCGTCCAGCTCTGCAAAGACAAGACTCACCCCTT +
Preference number: 3 (lower is better)
Translates to: PPRWHNPPGHRL*RPALQRQDSPL
Trigger: AAGGGGTGAGTCTTGTCTTTGCAGAGCTGGACGGCACAGCCTGTGGCCAGGAGGGTTATGCCAGCGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 72 bp TCCAACAGGAACCCCCAGAGACTCTGCCTAGGAAGCTaGAGTGAGCCCGGCCTTCCCCTGTGGATGAGAGGG +
Preference number: 3 (lower is better)
Translates to: SNRNPQRLCLGS*SEPGLPLWMRG
Trigger: CCCTCTCATCCACAGGGGAAGGCCGGGCTCACTCCAGCTTCCTAGGCAGAGTCTCTGGGGGTTCCTGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 72 bp CTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTaGGTGTCCACAGAGCAGGGGACATGCTGGGGGAGG +
Preference number: 3 (lower is better)
Translates to: LDRDSVLLPPHP*VSTEQGTCWGR
Trigger: CCTCCCCCAGCATGTCCCCTGCTCTGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR TCA 72 bp TGCTCGGGAGGTGGGGACACAGCCGACAGCTATCCCTaGGGCATCTCTGAGCACTGTTGGAGGGTCCAGGAA +
Preference number: 3 (lower is better)
Translates to: CSGGGDTADSYP*GISEHCWRVQE
Trigger: TTCCTGGACCCTCCAACAGTGCTCAGAGATGCCTCAGGGATAGCTGTCGGCTGTGTCCCCACCTCCCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 72 bp AGAGACGGGGAGCATCCACTTGTCTTGCTCGGGAGGTaGGGACACAGCCGACAGCTATCCCTGAGGCATCTC +
Preference number: 3 (lower is better)
Translates to: RDGEHPLVLLGR*GHSRQLSLRHL
Trigger: GAGATGCCTCAGGGATAGCTGTCGGCTGTGTCCCCACCTCCCGAGCAAGACAAGTGGATGCTCCCCGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR CCA 72 bp CACTGTGGTGTTCCCACTTATGGATTCCCGCCTCGCTaGCATAACCCTCCTGGCCACAGGCTGTGCCGTCCA +
Preference number: 3 (lower is better)
Translates to: HCGVPTYGFPPR*HNPPGHRLCRP
Trigger: TGGACGGCACAGCCTGTGGCCAGGAGGGTTATGCCAGCGAGGCGGGAATCCATAAGTGGGAACACCACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR GCA 72 bp CATGAGGATGAGGGCCATGGCCGAGCTTCCAGCAGCTaGCCTGGTTCACCTGGTTCACTTGTGTCCAACAGG +
Preference number: 3 (lower is better)
Translates to: HEDEGHGRASSS*PGSPGSLVSNR
Trigger: CCTGTTGGACACAAGTGAACCAGGTGAACCAGGGCAGCTGCTGGAAGCTCGGCCATGGCCCTCATCCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR CAA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACAGTTCACCTGGTTCACTaGTGTCCAACAGGAACCCCC +
Preference number: 3 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTVHLVH*CPTGTP
Trigger: GGGGGTTCCTGTTGGACACAAGTGAACCAGGTGAAC...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR TCA 72 bp TCACAGTCGCGGGAGAAAACATCAGAGCACTGGGACTaGAGAGACGGGGAGCATCCACTTGTCTTGCTCGGG +
Preference number: 3 (lower is better)
Translates to: SQSREKTSEHWD*RDGEHPLVLLG
Trigger: CCCGAGCAAGACAAGTGGATGCTCCCCGTCTCTTCAGTCCCAGTGCTCTGATGTTTTCTCCCGCGACTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
3UTR-3UTR CAA 90 bp CTTCAGGTGCAAGCTATGGGACCCGCTCTGAGCTGTGAGTATCTGAAACGTGACCCCCCGATCAAGACTTaGCCATGTTGCCCACAGCCA +
Preference number: 3 (lower is better)
Translates to: LQVQAMGPALSCEYLKRDPPIKT*PCCPQP
Trigger: TGGCTGTGGGCAACATGGCAAAGTCTTGATCGGGGG...GTCACGTTTCAGATACTCACAGCTCAGAGCGGGTCCCATAGCTTGCACCTGAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGCCAAGGGACTCGCCGTaGCAGGCGCCAGGGACACGC +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVPRDSP*QAPGTR
Trigger: GCGTGTCCCTGGCGCCTGGCACGGCGAGTCCCTTGG...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp GCGCACAGGGCCTGCCCTGACTTTCCAGACTCTCTGACCAGTGGAGCCTGGTCCAGCCACCTCGGCCACTaGGGCCGCCTGCCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: AHRACPDFPDSLTSGAWSSHLGH*GRLPRP
Trigger: GGGCCGAGGCAGGCGGCCTCAGTGGCCGAGGTGGCT...GGACCAGGCTCCACTGGTCAGAGAGTCTGGAAAGTCAGGGCAGGCCCTGTGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp CTGGCCACCCATAGGCCTCGGGAAGCAGGGTCACAGGTTCTGCTGACCAGCGTCCCGAGGGCTGGACCCTaGCCCGCCGTCCCACCGTCC +
Preference number: 4 (lower is better)
Translates to: LATHRPREAGSQVLLTSVPRAGP*PAVPPS
Trigger: GGACGGTGGGACGGCGGGTCAGGGTCCAGCCCTCGG...GACGCTGGTCAGCAGAACCTGTGACCCTGCTTCCCGAGGCCTATGGGTGGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCTGGCGGCTCCCATCCTaGCGCAGGCAGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWAWRLPS*RRQPGC
Trigger: GCAGCCCGGCTGCCTGCGGCAGGATGGGAGCCGCCA...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR GCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGTGGCGGCTCCCATCCTaGCGCAGGCAGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRWRLPS*RRQPGC
Trigger: GCAGCCCGGCTGCCTGCGGCAGGATGGGAGCCGCCA...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR GCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCCGGAGGCCCCTGGGCTaGTGCTGGCTGCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWARRPLG*CWLPVA
Trigger: TGCCACCGGCAGCCAGCAGCAGCCCAGGGGCCTCCG...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCGCACAGGTGATGCGCTaGGCCCGGCCCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGAQVMR*ARPSHP
Trigger: GGGGTGGGAGGGCCGGGCCCAGCGCATCACCTGTGC...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp AGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTCCACCTCGTCATGCTaGAGCAGCGAGGGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: SPPDALRTPSLAGWATTGSTSSC*SSEGAS
Trigger: CGACGCGCCCTCGCTGCTGCAGCATGACGAGGTGGA...CCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR GCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGAGGAGGAAGGCGTCCTaGTTGGGGTCACGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVRRKAS*LGSRPR
Trigger: CCTGGGCCGTGACCCCAAGCAGGACGCCTTCCTCCT...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACGCCTGCCCCATCCTGTaGCGGGGGCTAAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDACPIL*RGLRHQ
Trigger: CTGGTGCCTTAGCCCCCGGCACAGGATGGGGCAGGC...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGCTGCTGCTGGCTaGCGGTGGCAGCAGGACACA +
Preference number: 4 (lower is better)
Translates to: SPPDALRTPSLAGWATTGWAAAG*RWQQDT
Trigger: TGTGTCCTGCTGCCACCGGCAGCCAGCAGCAGCCCA...CCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGCTGGCGCCCTCCTCGTaGTGGAAGGCCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRLAPSS*WKASPR
Trigger: CCTGGGGCTGGCCTTCCACCACGAGGAGGGCGCCAG...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGGCCGCGATGGCGATCTaGCGGCTCCCATCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGAAMAI*RLPSCR
Trigger: GCGGCAGGATGGGAGCCGCCAGATCGCCATCGCGGC...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGCCACCATGGCCGCGATaGCGATCTGGCGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVPPWPR*RSGGSH
Trigger: ATGGGAGCCGCCAGATCGCCATCGCGGCCATGGTGG...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR CCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGCCGTCTCTAGCCGGGTaGGCCACGACCGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGPSLAG*ATTGWG
Trigger: TCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGG...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGCGAGGGGTTGGGACCTaGGGACGGCCAGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRRGVGT*GRPGPG
Trigger: ACCCGGACCTGGCCGTCCCCAGGTCCCAACCCCTCG...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCCCGTTCCCGCCGGCCTaGCCCGTGTCAGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWAPFPPA*PVSAAT
Trigger: TGTGGCAGCTGACACGGGCCAGGCCGGCGGGAACGG...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGCGTCGTAGCCACCTaGCGTGGCCGGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRGVVAT*RGRDPE
Trigger: CTCGGGGTCCCGGCCACGCCAGGTGGCTACGACGCC...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590970.5
CDS-3UTR GCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGACATGGCGGGTGGGTCTaGGCCTGCGGCTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRHGGWV*ACGSLP
Trigger: AGGGAGGGAGCCGCAGGCGCAGACCCACCCGCCATG...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCGCCTGCCCCATCCTGTaGCGGGGGCTAAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWAACPIL*RGLRHQ
Trigger: CTGGTGCCTTAGCCCCCGGCACAGGATGGGGCAGGC...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGCCCAGTGCAATGTTaGACCCAGGCAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SPPDALRTPSLAGWATTGCPVQC*TQAGQG
Trigger: GCCCTGCCCTGCCTGGGTGCAACATTGCACTGGGCA...CCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp TCCTGGAGTGTTTGGGGAAACCCGGGTGCCCCCGGTGTGGGCATTTGGGAAGGCGGGCTTCATGGCGGGTaGGTCTGCGCCTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SWSVWGNPGAPGVGIWEGGLHGG*VCACGS
Trigger: GGAGCCGCAGGCGCAGACCCACCCGCCATGAAGCCC...GCCTTCCCAAATGCCCACACCGGGGGCACCCGGGTTTCCCCAAACACTCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCAGCAGGCGGGACTTCTaGGCCCGCAGCGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWASRRDF*ARSVTS
Trigger: GCTGGTGACGCTGCGGGCCCAGAAGTCCCGCCTGCT...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGTTGGTTCCTGGCGTaGCCGGGACCCCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: SPPDALRTPSLAGWATTGCWFLA*PGPRGS
Trigger: AGATCCTCGGGGTCCCGGCCACGCCAGGAACCAACA...CCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR CCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGCTGTGGATGAGAGGGTaGGCAGCTGCTGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVLWMRG*AAADPQ
Trigger: CTGGGGGTCAGCAGCTGCCCACCCTCTCATCCACAG...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGATTCCCGCCTCGCTaGCATAACCCTCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVGFPPR*HNPPGH
Trigger: GTGGCCAGGAGGGTTATGCCAGCGAGGCGGGAATCC...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGCCACGTTGCCCAGGCTaGCCTTGCCCTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGPRCPG*PCPPGL
Trigger: GAGCCCAGGAGGGCAAGGCCAGCCTGGGCAACGTGG...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACGGCCCAGGGCCCAGCTaGGGTGCTCTTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDGPGPS*GALAQL
Trigger: CAGTTGTGCAAGAGCACCCCAGCTGGGCCCTGGGCC...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GCGCACAGGGCCTGCCCTGACTTTCCAGACTCTCTGACCAGTGGAGCCTGGTCCGGACGCCCAGCTCCCTaGGGAACAGGGCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: AHRACPDFPDSLTSGAWSGRPAP*GTGPWT
Trigger: GGTCCAGGGCCCTGTTCCCCAGGGAGCTGGGCGTCC...GGACCAGGCTCCACTGGTCAGAGAGTCTGGAAAGTCAGGGCAGGCCCTGTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp AGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGCCTTGCACCGGCAGTTaGAGGCCTCCTCCACTTTCC +
Preference number: 4 (lower is better)
Translates to: SPPDALRTPSLAGWATTGPCTGS*RPPPLS
Trigger: GGAAAGTGGAGGAGGCCTTCAACTGCCGGTGCAAGG...CCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp AGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGGGTCACAGGTTCTGCTaGCCAGCGTCCTTCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SPPDALRTPSLAGWATTGGHRFC*PASFVE
Trigger: CTCCACGAAGGACGCTGGTCAGCAGAACCTGTGACC...CCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGTCCGCCTCAGCCTCCTaGGTAGTTGGGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVSASAS*VVGASG
Trigger: ACCTGAAGCCCCAACTACTCAGGAGGCTGAGGCGGA...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGATGTCCCAGGCACGGATaGGGCCGTCGAAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRCPRHG*GRRRAG
Trigger: GCCTGCCCTTCGACGGCCGCATCCGTGCCTGGGACA...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGTCCACCTCGTCATGCTaGAGCAGCGAGGGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGSTSSC*SSEGAS
Trigger: CGACGCGCCCTCGCTGCTGCAGCATGACGAGGTGGA...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCCGCAGCAGCGGCTCCTaGTCCCACACCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWARSSGS*SHTQFS
Trigger: GGAGAACTGGGTGTGGGAGCAGGAGCCGCTGCTGCG...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACACTGGGCAGTCGCAGTaGCAGGCCTCAGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDTGQSQ*QASADL
Trigger: CAGGTCTGCTGAGGCCTGGCACTGCGACTGCCCAGT...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGCCTGGCCACAGGCTGTaGCGTCCAGCTCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SPPDALRTPSLAGWATTGPGHRL*RPALQR
Trigger: TCTTTGCAGAGCTGGACGGCACAGCCTGTGGCCAGG...CCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGACAGAGCAGGGGACATaGTGGGGGAGGCGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGTEQGT*WGRRPN
Trigger: GTTGGGCCGCCTCCCCCAGCATGTCCCCTGCTCTGT...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACTTGGGGAAACCCGGGTaGCCCCGGTGTGGGCATTTG +
Preference number: 4 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDLGKPG*PRCGHL
Trigger: CAAATGCCCACACCGGGGGCACCCGGGTTTCCCCAA...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGCCTCATGCCAGGCACTaGCGCCCTCCTCGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRPHARH*RPPRGG
Trigger: TCCACCACGAGGAGGGCGCCAGTGCCTGGCATGAGG...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGGGGCCTGGTCCACCTTaGCGAGGACGATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRGPGPP*RGRSGA
Trigger: TGCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCC...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGACAAAGACCAGGCCCTaGCAGCCACGAAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVTKTRP*QPRKPS
Trigger: GGAGGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGT...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCCCGGCCTTCCCCTGTaGATGAGAGGGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGPGLPL*MRGWAA
Trigger: AGCTGCCCACCCTCTCATCCACAGGGGAAGGCCGGG...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCGTCCCGCTGGAACCATaGCAGGCAGCCAACGGCGAG +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGVPLEP*QAANGE
Trigger: CTCGCCGTTGGCTGCCTGCCATGGTTCCAGCGGGAC...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCGTCTCTCTGGGGAGGTaGAGCCCATTTCTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWAVSLGR*SPFLRP
Trigger: GGGCCGGAGAAATGGGCTTCACCTCCCCAGAGAGAC...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGCCTGCCGGGACTCAATaGGCTTCTCCAGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRPAGTQ*ASPGAP
Trigger: GGGAGCTCCTGGAGAAGCTCATTGAGTCCCGGCAGG...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACCGATCTGGCGCAGGTTaGAGAGGCCTGTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDRSGAG*RGLCWP
Trigger: AGGCCAACACAGGCCTCTTCAACCTGCGCCAGATCG...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGTGGGGACAGACAATaGCAAGAGGCAAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVGGDRQ*QEARQP
Trigger: CGGCTGTCTTGCCTCTTGTCATTGTCTGTCCCCACC...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp CAGGTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCCCTAGGAAGCTGGAGTaGGCCCGGCCTTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: QVHGAEPGVRKVQSRPHGPRKLE*ARPSPV
Trigger: CACAGGGGAAGGCCGGGCTCACTCCAGCTTCCTAGG...GCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGCTGTCCAAATGGAGGTaGGGACGAGGCGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVLSKWR*GRGGCL
Trigger: CAGACATCCGCCTCGTCCTCACCTCCATTTGGACAG...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCTGCCACACTGTCCTCTaGGCCCACTGCTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWACHTVL*AHCWSP
Trigger: AGGGCTCCAGCAGTGGGCTCAGAGGACAGTGTGGCA...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGACGGGTGGGGACGCTGTaGGGCATGCTGCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRRVGTL*GMLHLP
Trigger: AGGGAGATGCAGCATGCCTCACAGCGTCCCCACCCG...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp GTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCAGTGCACGGCGCTGCCTGTaGGGTAGTGCCGCGACATCC +
Preference number: 4 (lower is better)
Translates to: VHGAEPGVRKVQSRPHGSARRCL*GSAATS
Trigger: GGATGTCGCGGCACTACCGCACAGGCAGCGCCGTGC...ACTGCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGAGGCCTGTGTTGGCCTaGCGGGACTCAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVRPVLA*RDSMSF
Trigger: GAAGCTCATTGAGTCCCGGCAGGCCAACACAGGCCT...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGCAGTCCCAGGCACTGTaGCAGAGCCTGCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRQSQAL*QSLPHP
Trigger: AGGATGGGGCAGGCTCTGGCACAGTGCCTGGGACTG...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp CAGGTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCGGGGTCTTGCCACGTTaGCCAGGCTGGCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: QVHGAEPGVRKVQSRPHGGVLPR*PGWPCP
Trigger: AGGGCAAGGCCAGCCTGGGCAACGTGGCAAGACCCC...GCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCATGCAAAGCAGGCCTaGAGGCACGTGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGHAKQA*RHVRGH
Trigger: GTGCCCACGCACGTGCCTGCAGGCCTGCTTTGCATG...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCAAGTCCCGCTCCACGTaGGTCCCGCTGAACATGGCG +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGKSRST*VPLNMA
Trigger: CGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTT...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACCCCGAGGATCTCCTaGCAGAGCCGCGCATACTCC +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWATPRIS*QSRAYS
Trigger: GGAGTATGCGCGGCTCTGCCAGGAGATCCTCGGGGT...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGTGTTGGTTCCTGGCGTaGCCGGGACCCCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRCWFLA*PGPRGS
Trigger: AGATCCTCGGGGTCCCGGCCACGCCAGGAACCAACA...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR CCA 90 bp CTGGCCACCCATAGGCCTCGGGAAGCAGGGTCACAGGTTCTGCTGACCAGCGTCAGGCATGTTGGTTCCTaGCGTGGCCGGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: LATHRPREAGSQVLLTSVRHVGS*RGRDPE
Trigger: CTCGGGGTCCCGGCCACGCCAGGAACCAACATGCCT...GACGCTGGTCAGCAGAACCTGTGACCCTGCTTCCCGAGGCCTATGGGTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp TCCTGGAGTGTTTGGGGAAACCCGGGTGCCCCCGGTGTGGGCATTTGGGAAGGCGGAAGGCGTCCTGCTTaGGGTCACGGCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SWSVWGNPGAPGVGIWEGGRRPA*GHGPGS
Trigger: GCTTCCTGGGCCGTGACCCCAAGCAGGACGCCTTCC...GCCTTCCCAAATGCCCACACCGGGGGCACCCGGGTTTCCCCAAACACTCCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGAAGGCGTCCTGCTTaGGGTCACGGCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRGRRPA*GHGPGS
Trigger: GCTTCCTGGGCCGTGACCCCAAGCAGGACGCCTTCC...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GCACAGCCCTCGGAGTCCTGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGGAGCGCAGGCCAGACTaGGCAGTCGCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AQPSESCPNGGEDEADVWERRPD*AVAVPG
Trigger: GCCTGGCACTGCGACTGCCCAGTCTGGCCTGCGCTC...CCAGACATCCGCCTCGTCCTCACCTCCATTTGGACAGGACTCCGAGGGCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGTGGGCCACGACCGGGTaGGGACAGACAATGACAAGA +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVWATTG*GQTMTR
Trigger: TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCA...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCTCTGCCTAGGAAGCTaGAGTGAGCCCGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGLCLGS*SEPGLP
Trigger: GGGAAGGCCGGGCTCACTCCAGCTTCCTAGGCAGAG...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGTTCTCCGGCCCAGCTTaGTTAGCCGCTCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGFSGPA*LAAPGT
Trigger: GGTACCTGGAGCGGCTAATCAAGCTGGGCCGGAGAA...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGCGATCTGGCGCAGGTTaGAGAGGCCTGTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGRSGAG*RGLCWP
Trigger: AGGCCAACACAGGCCTCTTCAACCTGCGCCAGATCG...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp CAGGTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCTGTGTGACAAGGCTGTaGTGGCCCAGGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QVHGAEPGVRKVQSRPHGCVTRL*WPRAQL
Trigger: CAGCTGGGCCCTGGGCCATCACAGCCTTGTCACACA...GCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGAGCACAGCCCTTGACTaGGTCCCGCTGGAACCATGG +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRSTALD*VPLEPW
Trigger: CCATGGTTCCAGCGGGACTCAGTCAAGGGCTGTGCT...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGGCAGCAGGACACACCTaGAGATGCCGGCCACATGAC +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRAAGHT*RCRPHD
Trigger: GTCATGTGGCCGGCATCTTCAGGTGTGTCCTGCTGC...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGAGAGCACGGAGATGCTaGGTCCGCCATGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRRARRC*VRHVSC
Trigger: GCAGGAGACATGGCGGACGCAGCATCTCCGTGCTCT...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACTCTTGTCGGCCTCTGTaGTGGCTGTCCGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDSCRPL*WLSGCP
Trigger: AGGACATCCGGACAGCCAGCACAGAGGCCGACAAGA...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGGTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCCCAAAGCAGGCCGCGTaGCCGTACTTTCCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: QVHGAEPGVRKVQSRPHGPKQAA*PYFPSR
Trigger: GCGGGAAGGAAAGTACGGGCACGCGGCCTGCTTTGG...GCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GCACAGCCCTCGGAGTCCTGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCGCAGCAGCGGCTCCTaGTCCCACACCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AQPSESCPNGGEDEADVWRSSGS*SHTQFS
Trigger: GGAGAACTGGGTGTGGGAGCAGGAGCCGCTGCTGCG...CCAGACATCCGCCTCGTCCTCACCTCCATTTGGACAGGACTCCGAGGGCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCAGCACGGCGCTGCCTGTaGGGTAGTGCCGCGACATCC +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQAARRCL*GSAATS
Trigger: GGATGTCGCGGCACTACCGCACAGGCAGCGCCGTGC...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GGTTCTGCTGACCAGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCGCGTCCGTCTGCGTGTaGAGGGCCTGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: GSADQRPSWRTKTGEGRSASVCV*RAWSTL
Trigger: CAAGGTGGACCAGGCCCTGCACACGCAGACGGACGC...GGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGACGACCTGCAGCCCCTTaGTCAGGAGGAAGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRRPAAP*SGGRRP
Trigger: AGGACGCCTTCCTCCTGAGCAAGGGGCTGCAGGTCG...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCGAGACACAGCAGCTCTaGAGCCCCCTCCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWAETQQL*SPLPVI
Trigger: GATCACAGGGAGGGGGCTGCAGAGCTGCTGTGTCTC...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCAAGAGTGCCCAGGTCCTaGCTAGCCCGTTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQARVPRS*LARSRR
Trigger: CCGGCGGGAACGGGCTAGGCAGGACCTGGGCACTCT...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAATGGCGAACTCCGCCTaGAGGGATGGGGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRMANSA*RDGAEP
Trigger: AGGCTCTGCCCCATCCCTGCAGGCGGAGTTCGCCAT...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGAGCCCTCCTAGCTCCTaGAGCGTGAAGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRSPPSS*SVKGRK
Trigger: CTTCCTGCCCTTCACGCTCCAGGAGCTAGGAGGGCT...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGTGGCCACGGTCTGGCTaGTCTTGGCCATGTTCATCT +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVWPRSG*SWPCSS
Trigger: AGATGAACATGGCCAAGACCAGCCAGACCGTGGCCA...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCGCGCCCTCCTCGTGGTaGAAGGCCAGCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPAPSSW*KASPRS
Trigger: GCTCCTGGGGCTGGCCTTCCACCACGAGGAGGGCGC...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAAAGTCCCGCTCCACGTaGGTCCCGCTGAACATGGCG +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRKSRST*VPLNMA
Trigger: CGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTT...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GGTTCTGCTGACCAGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCCCCAATCCAGGGCCTaGTGTGGCAACAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: GSADQRPSWRTKTGEGRSPQSRA*CGNSPR
Trigger: CCTCGGGCTGTTGCCACACCAGGCCCTGGATTGGGG...GGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACACTGACCTGGGCTaGGTGGGAATGGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGHTDLG*VGMGQE
Trigger: CTCCTGTCCCATTCCCACCCAGCCCAGGTCAGTGTG...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp TCCTGGAGTGTTTGGGGAAACCCGGGTGCCCCCGGTGTGGGCATTTGGGAAGGCGCAAAGCAGGCCCCATaGCAGTGGCCACAGCCACAC +
Preference number: 4 (lower is better)
Translates to: SWSVWGNPGAPGVGIWEGAKQAP*QWPQPH
Trigger: GTGTGGCTGTGGCCACTGCCATGGGGCCTGCTTTGC...GCCTTCCCAAATGCCCACACCGGGGGCACCCGGGTTTCCCCAAACACTCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCAACGGCCAGGTCCGGGTaGGGACGCTGTGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQATARSG*GRCEAC
Trigger: GCATGCCTCACAGCGTCCCCACCCGGACCTGGCCGT...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAGGCACAGGCTCACATaGCGTAACGGCCGCACTTCA +
Preference number: 4 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDRHRLT*RNGRTS
Trigger: TGAAGTGCGGCCGTTACGCCATGTGAGCCTGTGCCT...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp GTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCAGTGCTTGGTCTGCTCGATaGGCTCCCTGGTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VHGAEPGVRKVQSRPHGSAWSAR*APWCAP
Trigger: AGGAGCGCACCAGGGAGCTCATCGAGCAGACCAAGC...ACTGCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGCTCAGTGAGTCCTTCTaGACTTTCTCCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVLSESF*TFSWSH
Trigger: GTGGCTCCAGGAGAAAGTTCAGAAGGACTCACTGAG...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGACGGGGAAGTACTCCTTaGGCAGGTTCTGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRRGSTP*AGSGPR
Trigger: GCGTGGACCAGAACCTGCTCAAGGAGTACTTCCCCG...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCGGACACCCTCCTGCTTaGAGCGCGTGTGGAACATGT +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGGHPPA*SACGTC
Trigger: ACATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCC...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp GCGCACAGGGCCTGCCCTGACTTTCCAGACTCTCTGACCAGTGGAGCCTGGTCCAGCAGCCCAAGGCTGTaGCCCCAGCTCTGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: AHRACPDFPDSLTSGAWSSSPRL*PQLCCD
Trigger: ATCACAGCAGAGCTGGGGTCACAGCCTTGGGCTGCT...GGACCAGGCTCCACTGGTCAGAGAGTCTGGAAAGTCAGGGCAGGCCCTGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACTAAGCCCAGTTGGTaGCTTCCAGGGGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWATKPSW*LPGEWG
Trigger: ACCCCACTCCCCTGGAAGTCACCAACTGGGCTTAGT...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCAGCCGCACGTCCTCATaGCAGGCACTGGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPSRTSS*QALAPS
Trigger: GGAGGGCGCCAGTGCCTGGCATGAGGACGTGCGGCT...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCAGTCTCCACCTCGTCATaGTGCAGCAGCGAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQAVSTSS*CSSEGA
Trigger: CGCGCCCTCGCTGCTGCAGCATGACGAGGTGGAGAC...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR GCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGAGGCCTGTGTTGGCCTaGCGGGACTCAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRRPVLA*RDSMSF
Trigger: GAAGCTCATTGAGTCCCGGCAGGCCAACACAGGCCT...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCAGTCGACCTGCAGCCCCTTaGTCAGGAGGAAGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: VHGAEPGVRKVQSRPHGSRPAAP*SGGRRP
Trigger: AGGACGCCTTCCTCCTGAGCAAGGGGCTGCAGGTCG...ACTGCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GGTTCTGCTGACCAGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGTCCCAGGCACTGTaGCAGAGCCTGCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: GSADQRPSWRTKTGEGRSQSQAL*QSLPHP
Trigger: AGGATGGGGCAGGCTCTGGCACAGTGCCTGGGACTG...GGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGCGAGCTTCCAGCAGCTaGCCTGGTTCACCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRRASSS*PGSPGS
Trigger: TGAACCAGGTGAACCAGGGCAGCTGCTGGAAGCTCG...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp TGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCCACCCATAGGCCTCGGGTGCCCAGGCTGGCCTTaGCCTCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: CPNGGEDEADVWPPIGLGCPGWP*PPGLKQ
Trigger: TTGCTTGAGCCCAGGAGGGCAAGGCCAGCCTGGGCA...CCCGAGGCCTATGGGTGGCCAGACATCCGCCTCGTCCTCACCTCCATTTGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCAAGGTGGCCACGGTCTaGCTGGTCTTGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGKVATV*LVLAMF
Trigger: GAACATGGCCAAGACCAGCCAGACCGTGGCCACCTT...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAGCCGCGATGGCGATCTaGCGGCTCCCATCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHEAAMAI*RLPSCR
Trigger: GCGGCAGGATGGGAGCCGCCAGATCGCCATCGCGGC...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR CCA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACATGCGTGTGCAGGGCCTaGTCCACCTTGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTCVCRA*STLART
Trigger: CGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCA...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCAGTACCCCGAGGATCTCCTaGCAGAGCCGCGCATACTCC +
Preference number: 4 (lower is better)
Translates to: VHGAEPGVRKVQSRPHGSTPRIS*QSRAYS
Trigger: GGAGTATGCGCGGCTCTGCCAGGAGATCCTCGGGGT...ACTGCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCGAGCGCAGGCCAGACTaGGCAGTCGCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPERRPD*AVAVPG
Trigger: GCCTGGCACTGCGACTGCCCAGTCTGGCCTGCGCTC...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGTGGGCCACGACCGGGTaGGGACAGACAATGACAAGA +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRWATTG*GQTMTR
Trigger: TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCA...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCTGGGCCACGACCGGGTaGGGACAGACAATGACAAGA +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGWATTG*GQTMTR
Trigger: TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCA...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGATCTCTGAGCACTGTTaGAGGGTCCAGGAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRISEHC*RVQEAP
Trigger: GGGCGCTTCCTGGACCCTCCAACAGTGCTCAGAGAT...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGTCTTGCTCGGGAGGTaGGGACACAGCCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRVLLGR*GHSRQL
Trigger: TAGCTGTCGGCTGTGTCCCCACCTCCCGAGCAAGAC...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCGTGCTCTTGCACAACTaGGACTTCGCTGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWAVLLHN*DFAGDQ
Trigger: CTGGTCCCCAGCGAAGTCCCAGTTGTGCAAGAGCAC...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACAGAGCAGGGGACATGCTaGGGGAGGCGGCCCAACTTG +
Preference number: 4 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTEQGTC*GRRPNL
Trigger: CAAGTTGGGCCGCCTCCCCCAGCATGTCCCCTGCTC...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GCACAGCCCTCGGAGTCCTGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGGCCCCCGCTCTGTCCTaGAGTGTTTGGGGAAACCCG +
Preference number: 4 (lower is better)
Translates to: AQPSESCPNGGEDEADVWAPALS*SVWGNP
Trigger: CGGGTTTCCCCAAACACTCCAGGACAGAGCGGGGGC...CCAGACATCCGCCTCGTCCTCACCTCCATTTGGACAGGACTCCGAGGGCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGAGCCTCGGGCCTCAGTaGGTCCTTCTGAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRSLGPQ*VLLNFL
Trigger: GAGAAAGTTCAGAAGGACTCACTGAGGCCCGAGGCT...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGACTTTCCAGACTCTCTaGCCAGTGGAGCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGTFQTL*PVEPGP
Trigger: AGGACCAGGCTCCACTGGTCAGAGAGTCTGGAAAGT...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp GTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCAGTGCACAGGGCCTGCCCTaGCTTTCCAGACTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: VHGAEPGVRKVQSRPHGSAQGLP*LSRLSD
Trigger: GTCAGAGAGTCTGGAAAGTCAGGGCAGGCCCTGTGC...ACTGCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCGCAGCCCCCTCCCTGTaGTCAAAGCCCCCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPAAPSL*SKPPLC
Trigger: ACAGAGCGGGGGCTTTGATCACAGGGAGGGGGCTGC...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGATACACGCGCTTGGTCTaGTCGATGAGCTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRYTRLV*SMSSLV
Trigger: CACCAGGGAGCTCATCGAGCAGACCAAGCGCGTGTA...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGCCTCAAACTCCTGGGTaGCAACCTGGTCATACACGC +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGPQTPG*QPGHTR
Trigger: GCGTGTATGACCAGGTTGGCACCCAGGAGTTTGAGG...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GCACAGCCCTCGGAGTCCTGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCCGTGCGTGACCACCTaGACGGGGAAGTACTCCTTG +
Preference number: 4 (lower is better)
Translates to: AQPSESCPNGGEDEADVWPCVTT*TGKYSL
Trigger: CAAGGAGTACTTCCCCGTGCAGGTGGTCACGCACGG...CCAGACATCCGCCTCGTCCTCACCTCCATTTGGACAGGACTCCGAGGGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAGGGTCTGCGTCCGTCTaGGTGTGCAGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHEGSASV*VCRAWS
Trigger: GGACCAGGCCCTGCACACGCAGACGGACGCAGACCC...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAACTCCTCGGCGGGGTCTaGGTCCGTCTGCGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHELLGGV*VRLRVQ
Trigger: CTGCACACGCAGACGGACGCAGACCCCGCCGAGGAG...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCTTCAGGACACCCTCCTaGTTGAAGCGCGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWAFRTPS*LKRVWN
Trigger: GTTCCACACGCGCTTCAAGCAGGAGGGTGTCCTGAA...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAGCCTGCCCCATCCTGTaGCGGGGGCTAAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHEACPIL*RGLRHQ
Trigger: CTGGTGCCTTAGCCCCCGGCACAGGATGGGGCAGGC...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCAACCCCCAGAGACTCTaGCTAGGAAGCTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGNPQRL*LGSWSE
Trigger: CTCACTCCAGCTTCCTAGGCAGAGTCTCTGGGGGTT...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCAAGACTTTGCCATGTTaGCCACAGCCAGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGKTLPC*PQPGEW
Trigger: CCACTCCCCTGGCTGTGGGCAACATGGCAAAGTCTT...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GGTTCTGCTGACCAGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCTTGCCCAGGCTGCAGTaGAGTGGTGGGATCACGGCT +
Preference number: 4 (lower is better)
Translates to: GSADQRPSWRTKTGEGRSLPRLQ*SGGITA
Trigger: AGCCGTGATCCCACCACTGCACTGCAGCCTGGGCAA...GGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCAGTTGCCATCTCCACCTCTaGCCAGTGCGGTCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VHGAEPGVRKVQSRPHGSCHLHL*PVRSAL
Trigger: CAAAGCCGACCGCACTGGGCAGAGGTGGAGATGGCA...ACTGCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCCATGCTGCATCTCCCTaGTCGTGTGTGTGTGGAACC +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWAHAASP*SCVCGT
Trigger: GGTTCCACACACACACGAGCAGGGAGATGCAGCATG...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp CAGGTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCTCCTGGGTGCCAACCTaGTCATACACGCGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: QVHGAEPGVRKVQSRPHGSWVPT*SYTRLV
Trigger: GACCAAGCGCGTGTATGACCAGGTTGGCACCCAGGA...GCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGGAGGGGGAAACATGCTaGGGGAAGTCAAGGATATTC +
Preference number: 4 (lower is better)
Translates to: SPPDALRTPSLAGWATTGEGETC*GKSRIF
Trigger: GAATATCCTTGACTTCCCCCAGCATGTTTCCCCCTC...CCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGATTGGCGAGGACGATCTaGCGCAGGTTGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRLARTI*RRLKRP
Trigger: AGGCCTCTTCAACCTGCGCCAGATCGTCCTCGCCAA...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCATCCAGGGCCTGGTGTaGCAACAGCCCGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPIQGLV*QQPEGW
Trigger: CCAGCCCTCGGGCTGTTGCCACACCAGGCCCTGGAT...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGACCTGGCTGGCAGAACTaGTTCCCAGCCCTTTACTCC +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRPGWQN*FPALYS
Trigger: GGAGTAAAGGGCTGGGAACCAGTTCTGCCAGCCAGG...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGACTGACCAGTGGAGCCTaGTCCTTGATGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRLTSGA*SLMARA
Trigger: AGCTCTGGCCATCAAGGACCAGGCTCCACTGGTCAG...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GGTTCTGCTGACCAGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCTACCTCCACATCCCTaGGTGTCCACAGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSADQRPSWRTKTGEGRSLPPHP*VSTEQG
Trigger: CCCCTGCTCTGTGGACACCCAGGGATGTGGAGGTAG...GGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCAGCTGCTGGCTGCCGGTaGCAGCAGGACACACCTGAA +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQAAAGCR*QQDTPE
Trigger: TTCAGGTGTGTCCTGCTGCCACCGGCAGCCAGCAGC...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp TGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCCACCCATAGGCCTCGGGTCTGAACTGTGTAGGTaGCCTCCACATCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: CPNGGEDEADVWPPIGLGSELCR*PPHRPA
Trigger: CGCTGGCCGATGTGGAGGTCACCTACACAGTTCAGA...CCCGAGGCCTATGGGTGGCCAGACATCCGCCTCGTCCTCACCTCCATTTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAAGAAGAGCCGTCTCCTaGCAAGGGACGTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRRRAVS*QGTFPR
Trigger: TCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCT...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCGTGGAGCCTGGTCCTTaGTGGCCAGAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPVEPGP*WPELSR
Trigger: CCTGCTCAGCTCTGGCCATCAAGGACCAGGCTCCAC...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCAGTGCGCTCCTCTATCTaGTGGGCACTCAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQAVRSSI*WALRSH
Trigger: GTGGGACCTGAGTGCCCAGCAGATAGAGGAGCGCAC...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCGCGTCCGTCTGCGTGTaGAGGGCCTGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGASVCV*RAWSTL
Trigger: CAAGGTGGACCAGGCCCTGCACACGCAGACGGACGC...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGATTCAGGACACCCTCCTaGTTGAAGCGCGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRFRTPS*LKRVWN
Trigger: GTTCCACACGCGCTTCAAGCAGGAGGGTGTCCTGAA...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGGAGGAAGGCGTCCTaGTTGGGGTCACGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGRRKAS*LGSRPR
Trigger: CCTGGGCCGTGACCCCAAGCAGGACGCCTTCCTCCT...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GGTTCTGCTGACCAGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCAGTTGGGGCTTCAGGTaGAAGCTATGGGACCCGCTC +
Preference number: 4 (lower is better)
Translates to: GSADQRPSWRTKTGEGRSSWGFR*KLWDPL
Trigger: GAGCGGGTCCCATAGCTTGCACCTGAAGCCCCAACT...GGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCTGTGCTGGCTACGAGTaGTGTGCAAACAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWACAGYE*CANSVA
Trigger: TGCCACACTGTTTGCACAGCACTCGTAGCCAGCACA...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCATGCAAACAGGGCGAGTaGACAGGTGATGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQACKQGE*TGDALG
Trigger: GCCCAGCGCATCACCTGTGCACTCGCCCTGTTTGCA...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGATGTCAGCTGCCACAGTaGAAACAGGGCGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRCQLPQ*KQGECT
Trigger: TGTGCACTCGCCCTGTTTGCACTGTGGCAGCTGACA...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp TGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCCACCCATAGGCCTCGGGCTGGTCTCAGGCACGTaGCATTTCTTCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CPNGGEDEADVWPPIGLGLVSGT*HFFRRG
Trigger: CCCCCTCCTGAAGAAATGCCACGTGCCTGAGACCAG...CCCGAGGCCTATGGGTGGCCAGACATCCGCCTCGTCCTCACCTCCATTTGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAATGCGTGTGCAGGGCCTaGTCCACCTTGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHECVCRA*STLART
Trigger: CGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCA...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACAAGGTTGCAGGCATGTTaGTTCCTGGCGTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTRLQAC*FLAWPG
Trigger: TCCCGGCCACGCCAGGAACCAACATGCCTGCAACCT...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCGGAAGCGCCTCAGCATaGCGCTGGCATCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPGSASA*RWHPRN
Trigger: GTTCCGAGGATGCCAGCGCCATGCTGAGGCGCTTCC...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCCGTCTCTAGCCGGGTaGGCCACGACCGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVPSLAG*ATTGWG
Trigger: TCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGG...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTCCGTCTCTAGCCGGGTaGGCCACGACCGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPPSLAG*ATTGWG
Trigger: TCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGG...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGAGCCTCCTGAGTAGTTaGGGCTTCAGGTGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGSLLSS*GFRCKL
Trigger: TAGCTTGCACCTGAAGCCCCAACTACTCAGGAGGCT...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCGGGTGCCCCCGGTGTaGGCATTTGGGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQRVPPV*AFGKAL
Trigger: CAGAGCCTTCCCAAATGCCCACACCGGGGGCACCCG...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCCCTTGTGAGGGACTCTaGCGGCTGTCCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGPCEGL*RLSRAW
Trigger: CCAGGCTCGGGACAGCCGCCAGAGTCCCTCACAAGG...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAACATCGGCCAGCGCCTTaGGCGTGCTCTCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHEHRPAP*ACSRRT
Trigger: TGTCCTACGAGAGCACGCTCAAGGCGCTGGCCGATG...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACACCACGTGGGTCCCGCTaGACATGGCGAACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATPRGSR*TWRTPP
Trigger: AGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGG...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCTGCCGGGACTCAATaGGCTTCTCCAGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQPAGTQ*ASPGAP
Trigger: GGGAGCTCCTGGAGAAGCTCATTGAGTCCCGGCAGG...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACAGGTGGGGACAGACAATaGCAAGAGGCAAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTGGDRQ*QEARQP
Trigger: CGGCTGTCTTGCCTCTTGTCATTGTCTGTCCCCACC...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp CTTCAGGTGCAAGCTATGGGACCCGCTCTGAGCTGTGAGTATCTGAAACGTGACGCCCCCACAAGGACCTaGGCCCCAATCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LQVQAMGPALSCEYLKRDAPTRT*APIQGL
Trigger: CAGGCCCTGGATTGGGGCTCAGGTCCTTGTGGGGGC...GTCACGTTTCAGATACTCACAGCTCAGAGCGGGTCCCATAGCTTGCACCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAGGGGCCAAGGAGAGTaGCAACCTGGACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATRGQGE*QPGRAG
Trigger: CCCTGCCCGTCCAGGTTGTCACTCTCCTTGGCCCCT...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGGGTGGGTCTGCGCCTaGGGCTCCCTCCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSGWVCA*GSLPPS
Trigger: GGAAGGAGGGAGGGAGCCGCAGGCGCAGACCCACCC...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCTTGGAGGGGGAAACATaGTGGGGGAAGTCAAGGATA +
Preference number: 4 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGLEGET*WGKSRI
Trigger: TATCCTTGACTTCCCCCAGCATGTTTCCCCCTCCAA...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCGGTCCAGGTAGAACTTaGCGACCACCTCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGGPGRT*RPPPPR
Trigger: CCTCGGGGGAGGTGGTCGGCAAGTTCTACCTGGACC...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGGTCTGCGTCCGTCTaGGTGTGCAGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPGSASV*VCRAWS
Trigger: GGACCAGGCCCTGCACACGCAGACGGACGCAGACCC...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGGGCGTCGTAGCCACCTaGCAGATGGCCGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQGVVAT*QMAEGC
Trigger: GCAACCTTCGGCCATCTGGCAGGTGGCTACGACGCC...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR GCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCACGAAAGCCCTCCAGATaGCTTGAGGACGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQARKPSR*LEDAVS
Trigger: AGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCG...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GGTTCTGCTGACCAGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCTGTGCCGTCCAGCTCTaGAAAGACAAGACTCACCCC +
Preference number: 4 (lower is better)
Translates to: GSADQRPSWRTKTGEGRSCAVQL*KDKTHP
Trigger: GGGGTGAGTCTTGTCTTTGCAGAGCTGGACGGCACA...GGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGGTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCTGGACCGAGACTCTGTaGTACTACCTCCACATCCCT +
Preference number: 4 (lower is better)
Translates to: QVHGAEPGVRKVQSRPHGWTETL*YYLHIP
Trigger: AGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCA...GCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCCTTGTCCCGACGGAATaGACCAAGGGACTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPLVPTE*TKGLAV
Trigger: CACGGCGAGTCCCTTGGTGCATTCCGTCGGGACAAG...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGTTTCCTGAGTCTCTCTaGGGAGGTGAAGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGFPESL*GGEAHF
Trigger: GAAATGGGCTTCACCTCCCCAGAGAGACTCAGGAAA...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAGGAAGGCGTCCTGCTTaGGGTCACGGCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATGRRPA*GHGPGS
Trigger: GCTTCCTGGGCCGTGACCCCAAGCAGGACGCCTTCC...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGAGCGCAGGCCAGACTaGGCAGTCGCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPERRPD*AVAVPG
Trigger: GCCTGGCACTGCGACTGCCCAGTCTGGCCTGCGCTC...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCACAAAGACCAGGCCCTaGCAGCCACGAAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPTKTRP*QPRKPS
Trigger: GGAGGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGT...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp TGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCCACCCATAGGCCTCGGGAGACTCTCTGACCAGTaGAGCCTGGTCCTTGATGGC +
Preference number: 4 (lower is better)
Translates to: CPNGGEDEADVWPPIGLGRLSDQ*SLVLDG
Trigger: GCCATCAAGGACCAGGCTCCACTGGTCAGAGAGTCT...CCCGAGGCCTATGGGTGGCCAGACATCCGCCTCGTCCTCACCTCCATTTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp CAGGTGCATGGAGCAGAGCCAGGCGTGCGTAAGGTGCAAAGCAGGCCCCATGGCTTCCAGCAGCTGCCCTaGTTCACCTGGTTCACTTGT +
Preference number: 4 (lower is better)
Translates to: QVHGAEPGVRKVQSRPHGFQQLP*FTWFTC
Trigger: ACAAGTGAACCAGGTGAACCAGGGCAGCTGCTGGAA...GCCATGGGGCCTGCTTTGCACCTTACGCACGCCTGGCTCTGCTCCATGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCTGGGGAACAGGGCCCTaGACCGAGACTCTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPWGTGP*TETLCY
Trigger: GTAGCACAGAGTCTCGGTCCAGGGCCCTGTTCCCCA...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTCGTAGCCACCTGGCGTaGCCGGGACCCCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPRSHLA*PGPRGS
Trigger: AGATCCTCGGGGTCCCGGCCACGCCAGGTGGCTACG...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590970.5
CDS-3UTR TCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCCGATCTGGCGCAGGTTaGAGAGGCCTGTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGRSGAG*RGLCWP
Trigger: AGGCCAACACAGGCCTCTTCAACCTGCGCCAGATCG...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCGGACACCCTCCTGCTTaGAGCGCGTGTGGAACATGT +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPGHPPA*SACGTC
Trigger: ACATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCC...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GGTTCTGCTGACCAGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCACACGTCCTCCCTCATaGTCATCTCCACGTCGAACT +
Preference number: 4 (lower is better)
Translates to: GSADQRPSWRTKTGEGRSTRPPS*SSPRRT
Trigger: AGTTCGACGTGGAGATGAGCATGAGGGAGGACGTGT...GGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTCAGCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGTCTCCACCTCGTCATaGTGCAGCAGCGAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPVSTSS*CSSEGA
Trigger: CGCGCCCTCGCTGCTGCAGCATGACGAGGTGGAGAC...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR GCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCATGGGAGCAGAGCTGGTaGATCACGTGGCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQAWEQSW*ITWPNS
Trigger: TGAGTTTGGCCACGTGATGCACCAGCTCTGCTCCCA...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR GCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTCGCAGCAGCGGCTCCTaGTCCCACACCCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPRSSGS*SHTQFS
Trigger: GGAGAACTGGGTGTGGGAGCAGGAGCCGCTGCTGCG...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGGCGTCCGTCTGCGTGTaGAGGGCCTGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVASVCV*RAWSTL
Trigger: CAAGGTGGACCAGGCCCTGCACACGCAGACGGACGC...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGGGTCTGCGTCCGTCTaGGTGTGCAGGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSGSASV*VCRAWS
Trigger: GGACCAGGCCCTGCACACGCAGACGGACGCAGACCC...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTCTCCTCGGCGGGGTCTaGGTCCGTCTGCGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSLLGGV*VRLRVQ
Trigger: CTGCACACGCAGACGGACGCAGACCCCGCCGAGGAG...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGCTCCTCGGCGGGGTCTaGGTCCGTCTGCGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVLLGGV*VRLRVQ
Trigger: CTGCACACGCAGACGGACGCAGACCCCGCCGAGGAG...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAGGCGTCGTAGCCACCTaGCAGATGGCCGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATGVVAT*QMAEGC
Trigger: GCAACCTTCGGCCATCTGGCAGGTGGCTACGACGCC...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR GCA 90 bp CTGGCCACCCATAGGCCTCGGGAAGCAGGGTCACAGGTTCTGCTGACCAGCGTCAATCCATGCCAACCTTaGTGTTCAGGACACCCTCCT +
Preference number: 4 (lower is better)
Translates to: LATHRPREAGSQVLLTSVNPCQP*CSGHPP
Trigger: AGGAGGGTGTCCTGAACAGCAAGGTTGGCATGGATT...GACGCTGGTCAGCAGAACCTGTGACCCTGCTTCCCGAGGCCTATGGGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCACCCCGATCAAGACTTTaGCATGTTGCCCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQAPRSRL*HVAHSQ
Trigger: CTGGCTGTGGGCAACATGGCAAAGTCTTGATCGGGG...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCAGGCGTGCGTAAGGTaGAAAGCAGGCCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQQACVR*KAGPMA
Trigger: TGCCATGGGGCCTGCTTTGCACCTTACGCACGCCTG...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGTCCACCTCTGCCCAGTaGGGTCGGCTTTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQSTSAQ*GRLCLP
Trigger: TGGAAGGCAAAGCCGACCGCACTGGGCAGAGGTGGA...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGAGGGCCCAGCTGGGGTaGTCTTGCACAACTGGGACT +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQRAQLG*SCTTGT
Trigger: AGTCCCAGTTGTGCAAGAGCACCCCAGCTGGGCCCT...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGGGACGCTGTGAGGCATaGTGCATCTCCCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQGRCEA*CISLLV
Trigger: CACGAGCAGGGAGATGCAGCATGCCTCACAGCGTCC...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAATGTCGGCCTCTGTGCTaGCTGTCCGGATGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHECRPLC*LSGCPW
Trigger: CCAAGGACATCCGGACAGCCAGCACAGAGGCCGACA...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCCACCATGGCCGCGATaGCGATCTGGCGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVPPWPR*RSGGSH
Trigger: ATGGGAGCCGCCAGATCGCCATCGCGGCCATGGTGG...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR CCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGTCCCGCTCCACGTaGGTCCCGCTGAACATGGCG +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATKSRST*VPLNMA
Trigger: CGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTT...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCTTGGCGAGGACGATCTaGCGCAGGTTGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPLARTI*RRLKRP
Trigger: AGGCCTCTTCAACCTGCGCCAGATCGTCCTCGCCAA...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGTGCGTGTGCAGGGCCTaGTCCACCTTGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVCVCRA*STLART
Trigger: CGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCA...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCTGTGGAACATGTCCATaGAATACACCTCGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWACGTCP*NTPRST
Trigger: TGTGGAGCGAGGTGTATTCCATGGACATGTTCCACA...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAGGAAGCGCCTCAGCATaGCGCTGGCATCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATGSASA*RWHPRN
Trigger: GTTCCGAGGATGCCAGCGCCATGCTGAGGCGCTTCC...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTCCACGTGGGTCCCGCTaGACATGGCGAACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSPRGSR*TWRTPP
Trigger: AGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGG...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGCCACGTGGGTCCCGCTaGACATGGCGAACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVPRGSR*TWRTPP
Trigger: AGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGG...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp CTTCAGGTGCAAGCTATGGGACCCGCTCTGAGCTGTGAGTATCTGAAACGTGACCCTGCCGGGACTCAATaGGCTTCTCCAGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LQVQAMGPALSCEYLKRDPAGTQ*ASPGAP
Trigger: GGGAGCTCCTGGAGAAGCTCATTGAGTCCCGGCAGG...GTCACGTTTCAGATACTCACAGCTCAGAGCGGGTCCCATAGCTTGCACCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAGCCGACAGCTATCCCTaGGGCATCTCTGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHEADSYP*GISEHC
Trigger: ACAGTGCTCAGAGATGCCTCAGGGATAGCTGTCGGC...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAGGCTTACTGCAGCCTTaGCCTCCTAGGCTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHEGLLQP*PPRLKR
Trigger: TCGCTTGAGCCTAGGAGGTCAAGGCTGCAGTAAGCC...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR TCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTAGAGCTGCTGCTCCCTaGAAGCTCCGCACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSRAAAP*KLRTPR
Trigger: CCTCGGGGTGCGGAGCTTTCAGGGAGCAGCAGCTCT...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGGCCTGTGTTGGCCTaGCGGGACTCAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGRPVLA*RDSMSF
Trigger: GAAGCTCATTGAGTCCCGGCAGGCCAACACAGGCCT...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTACTGGGCAGTCGCAGTaGCAGGCCTCAGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPTGQSQ*QASADL
Trigger: CAGGTCTGCTGAGGCCTGGCACTGCGACTGCCCAGT...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTCAGTCCCAGGCACTGTaGCAGAGCCTGCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPQSQAL*QSLPHP
Trigger: AGGATGGGGCAGGCTCTGGCACAGTGCCTGGGACTG...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAACGAAAGCCCTCCAGATaGCTTGAGGACGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHERKPSR*LEDAVS
Trigger: AGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCG...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCCTGTCCGGATGTCCTTaGAGGGGGAAACATGCTGGG +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGLSGCP*RGKHAG
Trigger: CCCAGCATGTTTCCCCCTCCAAGGACATCCGGACAG...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGGCTCATCTAGGAAGGTaGCCACGGTCTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQAHLGR*PRSGWS
Trigger: AGACCAGCCAGACCGTGGCCACCTTCCTAGATGAGC...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAATGGCGAACTCCGCCTaGGAGCAGAGCTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATMANSA*EQSWCI
Trigger: GATGCACCAGCTCTGCTCCCAGGCGGAGTTCGCCAT...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR CCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGGGGCCTGGTCCACCTTaGCGAGGACGATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVGPGPP*RGRSGA
Trigger: TGCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCC...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTACCCCGAGGATCTCCTaGCAGAGCCGCGCATACTCC +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPTPRIS*QSRAYS
Trigger: GGAGTATGCGCGGCTCTGCCAGGAGATCCTCGGGGT...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGAGGCATGTTGGTTCCTaGCGTGGCCGGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVRHVGS*RGRDPE
Trigger: CTCGGGGTCCCGGCCACGCCAGGAACCAACATGCCT...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR CCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAGGTTGCAGGCATGTTaGTTCCTGGCGTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATRLQAC*FLAWPG
Trigger: TCCCGGCCACGCCAGGAACCAACATGCCTGCAACCT...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR CCA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGATGCTTGAAGCGCGTGTaGAACATGTCCATGGAATAC +
Preference number: 4 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRCLKRV*NMSMEY
Trigger: GTATTCCATGGACATGTTCCACACGCGCTTCAAGCA...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAACAAAGACCAGGCCCTaGCAGCCACGAAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATTKTRP*QPRKPS
Trigger: GGAGGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGT...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAGACCAGCGTCCTTCGTaGAGGACTAAGACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHEDQRPS*RTKTGE
Trigger: CTCCCCAGTCTTAGTCCTCCACGAAGGACGCTGGTC...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCGTCGATCCTCATTCCTaGACTCCGTGTTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: SHESPPDALRTPSLAGWAVDPHS*TPCFQT
Trigger: AGTTTGAAAACACGGAGTCCAGGAATGAGGATCGAC...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCGCTGTGCAAACAGTGTaGCAGGGAAGCCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPAVQTV*QGSQER
Trigger: CCTTTCCTGGCTTCCCTGCCACACTGTTTGCACAGC...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTCGGCTGTCCCGAGCCTaGGTCACACCAAGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSRLSRA*VTPSQR
Trigger: CCGCTGACTTGGTGTGACCCAGGCTCGGGACAGCCG...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGAAGAGCCGTCTCCTaGCAAGGGACGTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHERRAVS*QGTFPR
Trigger: TCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCT...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGGCCACCTGTTCCTTGTaGGGGACTCTGGCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVATCSL*GTLAAV
Trigger: GACAGCCGCCAGAGTCCCTCACAAGGAACAGGTGGC...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTCTCCCTCCTTCCACCTaGTACGCGTCCAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSLPPST*YASSHL
Trigger: GAGGTGGCTGGACGCGTAGCAGGTGGAAGGAGGGAG...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp CTTCAGGTGCAAGCTATGGGACCCGCTCTGAGCTGTGAGTATCTGAAACGTGACCACAGAGCACGGAGATaGTGCGTCCGCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: LQVQAMGPALSCEYLKRDHRARR*CVRHVS
Trigger: GGAGACATGGCGGACGCAGCATCTCCGTGCTCTGTG...GTCACGTTTCAGATACTCACAGCTCAGAGCGGGTCCCATAGCTTGCACCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCCGCCGGGTCTCAGGATaGAGCTTCTGTAATCCATGC +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGRRVSG*SFCNPC
Trigger: GCATGGATTACAGAAGCTGCATCCTGAGACCCGGCG...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTACTGGGCAGTCGCAGTaGCAGGCCTCAGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSTGQSQ*QASADL
Trigger: CAGGTCTGCTGAGGCCTGGCACTGCGACTGCCCAGT...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCATCCACTTGTCTTaGTCGGGAGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHESIHLS*SGGGDT
Trigger: TGTGTCCCCACCTCCCGAGCAAGACAAGTGGATGCT...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCCCTCAAGGTCCTCTCTaGAACACCGAGGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPPQGPL*NTEAFL
Trigger: CAGAAAAGCCTCGGTGTTGCAGAGAGGACCTTGAGG...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGCTGGCCCGTGTCAGCTaGCACAGTGCAAACAGGGCG +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVLARVS*HSANRA
Trigger: CGCCCTGTTTGCACTGTGGCAGCTGACACGGGCCAG...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCTGCAGGCTGCCCAGTaGAATGTTGCACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVLQAAQ*NVAPRQ
Trigger: CTGCCTGGGTGCAACATTGCACTGGGCAGCCTGCAG...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCAGCTTCTGTAATCCATaGCAACCTGCAGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPSFCNP*QPAGCP
Trigger: TGGGCAGCCTGCAGGTTGGCATGGATTACAGAAGCT...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGATGGCGAACTCCGCCTaGGAGCAGAGCTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVMANSA*EQSWCI
Trigger: GATGCACCAGCTCTGCTCCCAGGCGGAGTTCGCCAT...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR CCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGGGAAGCGCCTCAGCATaGCGCTGGCATCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVGSASA*RWHPRN
Trigger: GTTCCGAGGATGCCAGCGCCATGCTGAGGCGCTTCC...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCTGGTGTTCCCACTTATaGATTCCCGCCTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGWCSHL*IPASLA
Trigger: TGCCAGCGAGGCGGGAATCCATAAGTGGGAACACCA...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCGGCGAGGGAACTCCTaGGTGATCCTCAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVRRGNS*VILKVL
Trigger: GAGGACCTTGAGGATCACCCAGGAGTTCCCTCGCCG...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAGAAGAGCCGTCTCCTaGCAAGGGACGTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATRRAVS*QGTFPR
Trigger: TCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCT...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR TCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTTCAGAGCACTGGGACTaGAGAGACGGGGAGCATCCA +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPSEHWD*RDGEHP
Trigger: TGGATGCTCCCCGTCTCTTCAGTCCCAGTGCTCTGA...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACACAGATGGCCGAAGGTTaGAGGCATGTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATQMAEG*RHVGSW
Trigger: CCAGGAACCAACATGCCTGCAACCTTCGGCCATCTG...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR GCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCGAAAGCCCTCCAGATaGCTTGAGGACGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVRKPSR*LEDAVS
Trigger: AGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCG...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGTGGCTACGAGTGCTGTaGAAACAGTGTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQWLRVL*KQCGRE
Trigger: TTCCCTGCCACACTGTTTGCACAGCACTCGTAGCCA...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGATGTGCACACGCGTGTaGTGGCTACGAGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVMCTRV*WLRVLC
Trigger: GCACAGCACTCGTAGCCAGCACACGCGTGTGCACAT...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAACGTCCTCAAACTCCTaGGTGCCAACCTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHETSSNS*VPTWSY
Trigger: GTATGACCAGGTTGGCACCCAGGAGTTTGAGGACGT...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGACAGACCACAGGCACTaGCCCCACACCCACCGAACT +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVTDHRH*PHTHRT
Trigger: AGTTCGGTGGGTGTGGGGCCAGTGCCTGTGGTCTGT...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTTGGGAGCAGAGCTGGTaGATCACGTGGCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPWEQSW*ITWPNS
Trigger: TGAGTTTGGCCACGTGATGCACCAGCTCTGCTCCCA...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAATCCATGCCAACCTTaGTGTTCAGGACACCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHENPCQP*CSGHPP
Trigger: AGGAGGGTGTCCTGAACAGCAAGGTTGGCATGGATT...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR GCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTGTGCGCACAGGGCCTaGCCTGACTTTCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVCAHRA*PDFPDS
Trigger: AGAGTCTGGAAAGTCAGGGCAGGCCCTGTGCGCACA...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTCAGCTGGGGTGCTCTTaGACAACTGGGACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSQLGCS*TTGTSL
Trigger: CAGCGAAGTCCCAGTTGTGCAAGAGCACCCCAGCTG...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCACCTGTGTGGATGTaGACACGCGTGTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSAPVWM*TRVCWL
Trigger: TAGCCAGCACACGCGTGTGCACATCCACACAGGTGC...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTCGCTGTGAGGCATGCTaGATCTCCCTGCTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSRCEAC*ISLLVC
Trigger: ACACACGAGCAGGGAGATGCAGCATGCCTCACAGCG...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp CTTCAGGTGCAAGCTATGGGACCCGCTCTGAGCTGTGAGTATCTGAAACGTGACCGGTCTGGCTGGTCTTaGCCATGTTCATCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LQVQAMGPALSCEYLKRDRSGWS*PCSSPG
Trigger: TCCTGGAGATGAACATGGCCAAGACCAGCCAGACCG...GTCACGTTTCAGATACTCACAGCTCAGAGCGGGTCCCATAGCTTGCACCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTGGCGAGGACGATCTaGCGCAGGTTGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVLARTI*RRLKRP
Trigger: AGGCCTCTTCAACCTGCGCCAGATCGTCCTCGCCAA...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACACTGCCCTGGTTCACCTaGTTCACTTGTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: EPSPDKGRFPERRRVSATLPWFT*FTCVQQ
Trigger: CTGTTGGACACAAGTGAACCAGGTGAACCAGGGCAG...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTCAGGCTGCAGTGCAGTaGTGGGATCACGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSQAAVQ*WDHGLL
Trigger: CAGTAAGCCGTGATCCCACCACTGCACTGCAGCCTG...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGAAGCCAGGAAAGGTaGACACACGGTCGATCCTCA +
Preference number: 4 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPGSQER*THGRSS
Trigger: TGAGGATCGACCGTGTGTCCACCTTTCCTGGCTTCC...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTGACTGAGTCCCGCTaGAACCATGGCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVLTESR*NHGRQP
Trigger: TGGCTGCCTGCCATGGTTCCAGCGGGACTCAGTCAA...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGGGGAATGTTCCAGAATaGCAACAGGTGAGAAGCATG +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQGNVPE*QQVRSM
Trigger: CATGCTTCTCACCTGTTGTCATTCTGGAACATTCCC...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGCAGATGGCCGAAGGTTaGAGGCATGTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVQMAEG*RHVGSW
Trigger: CCAGGAACCAACATGCCTGCAACCTTCGGCCATCTG...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTTTCAGGACACCCTCCTaGTTGAAGCGCGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSFRTPS*LKRVWN
Trigger: GTTCCACACGCGCTTCAAGCAGGAGGGTGTCCTGAA...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCAGCTTCTGTAATCCATaGCAACCTTGCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPSFCNP*QPCCSG
Trigger: TCCTGAACAGCAAGGTTGGCATGGATTACAGAAGCT...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR GCA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTCGCCGGGTCTCAGGATaGAGCTTCTGTAATCCATGC +
Preference number: 4 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSRRVSG*SFCNPC
Trigger: GCATGGATTACAGAAGCTGCATCCTGAGACCCGGCG...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGTGTGGAACATGTCCATaGAATACACCTCGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GRFPERRRVSATKTRPWQCGTCP*NTPRST
Trigger: TGTGGAGCGAGGTGTATTCCATGGACATGTTCCACA...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCTGCTTGAAGCGCGTGTaGAACATGTCCATGGAATAC +
Preference number: 4 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGCLKRV*NMSMEY
Trigger: GTATTCCATGGACATGTTCCACACGCGCTTCAAGCA...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTGCACACGCGTGTGCTaGCTACGAGTGCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVCTRVC*LRVLCK
Trigger: TTTGCACAGCACTCGTAGCCAGCACACGCGTGTGCA...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR TCA 90 bp CTTCAGGTGCAAGCTATGGGACCCGCTCTGAGCTGTGAGTATCTGAAACGTGACCGTTCAGGTTCTTGTTaGAGTCGATGCACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LQVQAMGPALSCEYLKRDRSGSC*SRCTEG
Trigger: GCCTTCTGTGCATCGACTTCAACAAGAACCTGAACG...GTCACGTTTCAGATACTCACAGCTCAGAGCGGGTCCCATAGCTTGCACCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR GCA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGCAGTGCGGTCGGCTTTaGCTTCCAGCTTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVQCGRL*LPAFLF
Trigger: GAAAAGAAAAGCTGGAAGGCAAAGCCGACCGCACTG...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGTGTGGAACATGTCCATaGAATACACCTCGCTCCACA +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVCGTCP*NTPRST
Trigger: TGTGGAGCGAGGTGTATTCCATGGACATGTTCCACA...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR GCA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGAGCTTCTGTAATCCATaGCAACCTTGCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVSFCNP*QPCCSG
Trigger: TCCTGAACAGCAAGGTTGGCATGGATTACAGAAGCT...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS GCA 90 bp CCCCCGCTGCCCTCACCCACCGCGGGTACAGGTCCAGGTAGAACTTaGCGACCACCTCCCCCGAGGCCGCGTCCCTCGCGGTGTAGAGCC +
Preference number: 5 (lower is better)
Translates to: PPLPSPTAGTGPGRT*RPPPPRPRPSRCRA
Trigger: GGCTCTACACCGCGAGGGACGCGGCCTCGGGGGAGGTGGTCGGCAAGTTCTACCTGGACCTGTACCCGCGGTGGGTGAGGGCAGCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 90 bp TGCCTAGCCCGTTCCCGCCGGCCTGGCCCGTGTCAGCTGCCACAGTaGAAACAGGGCGAGTGCACAGGTGATGCGCTGGGCCCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: CLARSRRPGPCQLPQ*KQGECTGDALGPAL
Trigger: GAGGGCCGGGCCCAGCGCATCACCTGTGCACTCGCCCTGTTTGCACTGTGGCAGCTGACACGGGCCAGGCCGGCGGGAACGGGCTAGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000587468.1
CDS CCA 90 bp CCGCGTCCCTCGCGGTGTAGAGCCGCACGTCCTCATGCCAGGCACTaGCGCCCTCCTCGTGGTGGAAGGCCAGCCCCAGGAGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: PRPSRCRAARPHARH*RPPRGGRPAPGAPG
Trigger: ACCAGGAGCTCCTGGGGCTGGCCTTCCACCACGAGGAGGGCGCCAGTGCCTGGCATGAGGACGTGCGGCTCTACACCGCGAGGGACGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000590533.1
ENST00000591149.5
CDS GCA 90 bp TCCTGGCAGAGCCGCGCATACTCCTCGGCGGGGTCTGCGTCCGTCTaGGTGTGCAGGGCCTGGTCCACCTTGGCGAGGACGATCTGGCGC +
Preference number: 5 (lower is better)
Translates to: SWQSRAYSSAGSASV*VCRAWSTLARTIWR
Trigger: GCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGACCCCGCCGAGGAGTATGCGCGGCTCTGCCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS GCA 90 bp CCCGAGGATCTCCTGGCAGAGCCGCGCATACTCCTCGGCGGGGTCTaGGTCCGTCTGCGTGTGCAGGGCCTGGTCCACCTTGGCGAGGAC +
Preference number: 5 (lower is better)
Translates to: PEDLLAEPRILLGGV*VRLRVQGLVHLGED
Trigger: GTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGACCCCGCCGAGGAGTATGCGCGGCTCTGCCAGGAGATCCTCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS GCA 90 bp CGCCGGCCTGGCCCGTGTCAGCTGCCACAGTGCAAACAGGGCGAGTaGACAGGTGATGCGCTGGGCCCGGCCCTCCCACCCCAAAACTGG +
Preference number: 5 (lower is better)
Translates to: RRPGPCQLPQCKQGE*TGDALGPALPPQNW
Trigger: CCAGTTTTGGGGTGGGAGGGCCGGGCCCAGCGCATCACCTGTGCACTCGCCCTGTTTGCACTGTGGCAGCTGACACGGGCCAGGCCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000587468.1
CDS CCA 90 bp GCAGGCATGTTGGTTCCTGGCGTGGCCGGGACCCCGAGGATCTCCTaGCAGAGCCGCGCATACTCCTCGGCGGGGTCTGCGTCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: AGMLVPGVAGTPRIS*QSRAYSSAGSASVC
Trigger: GCAGACGGACGCAGACCCCGCCGAGGAGTATGCGCGGCTCTGCCAGGAGATCCTCGGGGTCCCGGCCACGCCAGGAACCAACATGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
CDS GCA 90 bp CAGAGCCGCGCATACTCCTCGGCGGGGTCTGCGTCCGTCTGCGTGTaGAGGGCCTGGTCCACCTTGGCGAGGACGATCTGGCGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QSRAYSSAGSASVCV*RAWSTLARTIWRRL
Trigger: CAACCTGCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGACCCCGCCGAGGAGTATGCGCGGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS CCA 90 bp GAGCCTCAGAGTGCCCAGGTCCTGCCTAGCCCGTTCCCGCCGGCCTaGCCCGTGTCAGCTGCCACAGTGCAAACAGGGCGAGTGCACAGG +
Preference number: 5 (lower is better)
Translates to: EPQSAQVLPSPFPPA*PVSAATVQTGRVHR
Trigger: CCTGTGCACTCGCCCTGTTTGCACTGTGGCAGCTGACACGGGCCAGGCCGGCGGGAACGGGCTAGGCAGGACCTGGGCACTCTGAGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000587468.1
CDS-3UTR CAA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGAGGAAGGCGTCCTGCTaGGGGTCACGGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVRKASC*GSRPRK
Trigger: CTTCCTGGGCCGTGACCCCAAGCAGGACGCCTTCCT...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS TCA 90 bp AGCCAGCCAAATAGGGGCCAGGCCGACCGCCAGCAGCAAGGTCTCTaGGGCGGCACATCCCCCGGGACCTGGAACTCAGCCCACCCGTGT +
Preference number: 5 (lower is better)
Translates to: SQPNRGQADRQQQGL*GGTSPGTWNSAHPC
Trigger: ACACGGGTGGGCTGAGTTCCAGGTCCCGGGGGATGTGCCGCCTCAGAGACCTTGCTGCTGGCGGTCGGCCTGGCCCCTATTTGGCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 90 bp TCTCCTCCACCTGGTTCATGTAGTAGCGCATGTCCCAGGCACGGATaGGGCCGTCGAAGGGCAGGCCCCGGCGCTCGCACTCCGCACGCT +
Preference number: 5 (lower is better)
Translates to: SPPPGSCSSACPRHG*GRRRAGPGARTPHA
Trigger: AGCGTGCGGAGTGCGAGCGCCGGGGCCTGCCCTTCGACGGCCGCATCCGTGCCTGGGACATGCGCTACTACATGAACCAGGTGGAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000591149.5
CDS GCA 90 bp CGTGCCCGTACTTTCCTTCCCGCGGGTACAGGTCCAGGTAGAACTTaGCGACCACCTCCCCCGAGGCCGCGTCCCTCGCGGTGTAGAGCC +
Preference number: 5 (lower is better)
Translates to: RARTFLPAGTGPGRT*RPPPPRPRPSRCRA
Trigger: GGCTCTACACCGCGAGGGACGCGGCCTCGGGGGAGGTGGTCGGCAAGTTCTACCTGGACCTGTACCCGCGGGAAGGAAAGTACGGGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000591363.5
CDS CCA 90 bp GGAAGGCGTCCTGCTTGGGGTCACGGCCCAGGAAGCGCCTCAGCATaGCGCTGGCATCCTCGGAACCGCCGGGTCTCAGGATGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GRRPAWGHGPGSASA*RWHPRNRRVSGCSF
Trigger: GAAGCTGCATCCTGAGACCCGGCGGTTCCGAGGATGCCAGCGCCATGCTGAGGCGCTTCCTGGGCCGTGACCCCAAGCAGGACGCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000589087.5
ENST00000590970.5
CDS CCA 90 bp ACATCCCCCGGGACCTGGAACTCAGCCCACCCGTGTGCGCCCTCTTaGCCTGGCCCTCACTCTGCCACTAGGACCCAAGCCTGGGGACCA +
Preference number: 5 (lower is better)
Translates to: TSPGTWNSAHPCAPS*PGPHSATRTQAWGP
Trigger: TGGTCCCCAGGCTTGGGTCCTAGTGGCAGAGTGAGGGCCAGGCCAAGAGGGCGCACACGGGTGGGCTGAGTTCCAGGTCCCGGGGGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS-3UTR CAA 90 bp AGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGGCGTCGGCTGTGGGCTaGGTGAAGTTGGCCACCATG +
Preference number: 5 (lower is better)
Translates to: SPPDALRTPSLAGWATTGASAVG*VKLATM
Trigger: CATGGTGGCCAACTTCACCAAGCCCACAGCCGACGC...CCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS CCA 90 bp GCATACTCCTCGGCGGGGTCTGCGTCCGTCTGCGTGTGCAGGGCCTaGTCCACCTTGGCGAGGACGATCTGGCGCAGGTTGAAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: AYSSAGSASVCVCRA*STLARTIWRRLKRP
Trigger: AGGCCTCTTCAACCTGCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGACCCCGCCGAGGAGTATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS-3UTR CAA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCAGGAAGGCGTCCTGCTaGGGGTCACGGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SHESPPDALRTPSLAGWARKASC*GSRPRK
Trigger: CTTCCTGGGCCGTGACCCCAAGCAGGACGCCTTCCT...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGACGCAGCCACACTCCTaGTCCCGACGGAATGCACCA +
Preference number: 5 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVTQPHS*SRRNAP
Trigger: TGGTGCATTCCGTCGGGACAAGGAGTGTGGCTGCGT...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS TCA 90 bp GCAGGGCAGGGCCGGCCCTCAAAGCTGGTAGCCACCTGTTCCTTGTaGGGGACTCTGGCGGCTGTCCCGAGCCTGGGTCACACCAAGTCA +
Preference number: 5 (lower is better)
Translates to: AGQGRPSKLVATCSL*GTLAAVPSLGHTKS
Trigger: TGACTTGGTGTGACCCAGGCTCGGGACAGCCGCCAGAGTCCCTCACAAGGAACAGGTGGCTACCAGCTTTGAGGGCCGGCCCTGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 90 bp TGCCCACCAGCTGGGTCCACAGGAAACCCAGCTGTAACCAGCAGGTaGGTGCAGAGCAGCCAGCCAAATAGGGGCCAGGCCGACCGCCAG +
Preference number: 5 (lower is better)
Translates to: CPPAGSTGNPAVTSR*VQSSQPNRGQADRQ
Trigger: CTGGCGGTCGGCCTGGCCCCTATTTGGCTGGCTGCTCTGCACGCACCTGCTGGTTACAGCTGGGTTTCCTGTGGACCCAGCTGGTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CCA 90 bp TTCTCCAGCATCTGCGACGGCGCCTCCACAAAGTCCCGCTCCACGTaGGTCCCGCTGAACATGGCGAACTCCGCCTGGGAGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: FSSICDGASTKSRST*VPLNMANSAWEQSW
Trigger: CCAGCTCTGCTCCCAGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGCCGTCGCAGATGCTGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000587401.5
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
CDS CCA 90 bp TTCTCCAGCATCTGCGACGGCGCCTCCACAAAGTCCCGCTCCACGTaGGTCCCGCTGAACATGGCGAACTCCGCCTGCAGGGATGGGGCA +
Preference number: 5 (lower is better)
Translates to: FSSICDGASTKSRST*VPLNMANSACRDGA
Trigger: TGCCCCATCCCTGCAGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGCCGTCGCAGATGCTGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000587468.1
CDS-3UTR CAA 90 bp CCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGTTGAAGAGGCCTGTGTaGGCCTGCCGGGACTCAATG +
Preference number: 5 (lower is better)
Translates to: PSRCLEDAVSSRVGHDRVLKRPV*ACRDSM
Trigger: CATTGAGTCCCGGCAGGCCAACACAGGCCTCTTCAA...CACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACACGATCTGGCGCAGGTaGAAGAGGCCTGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDTIWRR*KRPVLA
Trigger: GGCCAACACAGGCCTCTTCAACCTGCGCCAGATCGT...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGAAGGTTGCAGGCATGTaGGTTCCTGGCGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRKVAGM*VPGVAG
Trigger: CCCGGCCACGCCAGGAACCAACATGCCTGCAACCTT...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS GCA 90 bp CAGCCACACTCCTTGTCCCGACGGAATGCACCAAGGGACTCGCCGTaGCAGGCGCCAGGGACACGCAGAAAGCAGCATGCAAAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: QPHSLSRRNAPRDSP*QAPGTRRKQHAKQA
Trigger: GGCCTGCTTTGCATGCTGCTTTCTGCGTGTCCCTGGCGCCTGGCACGGCGAGTCCCTTGGTGCATTCCGTCGGGACAAGGAGTGTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CCA 90 bp CGTCCTGCTTGGGGTCACGGCCCAGGAAGCGCCTCAGCATGGCGCTaGCATCCTCGGAACCGCCGGGTCTCAGGATGCAGCTTCTGTAAT +
Preference number: 5 (lower is better)
Translates to: RPAWGHGPGSASAWR*HPRNRRVSGCSFCN
Trigger: ATTACAGAAGCTGCATCCTGAGACCCGGCGGTTCCGAGGATGCCAGCGCCATGCTGAGGCGCTTCCTGGGCCGTGACCCCAAGCAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000589087.5
ENST00000590970.5
CDS CCA 90 bp CCCATGGCTCTGAGGCCGATCACGCAGATCCCGGAAGGACTCGTATaGGAAGACACGGAGCTCCCAGCACTCACAGCCCGAGGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: PMALRPITQIPEGLV*EDTELPALTARGLR
Trigger: CCTCAGGCCTCGGGCTGTGAGTGCTGGGAGCTCCGTGTCTTCCCATACGAGTCCTTCCGGGATCTGCGTGATCGGCCTCAGAGCCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587401.5
CDS-3UTR CAA 90 bp AGCGTCCTTCGTGGAGGACTAAGACTGGGGAGGGACGCTCCCAGGGCACGAGGGGCTGTCCGGATGTCCTaGGAGGGGGAAACATGCTGG +
Preference number: 5 (lower is better)
Translates to: SVLRGGLRLGRDAPRARGAVRMS*EGETCW
Trigger: CCAGCATGTTTCCCCCTCCAAGGACATCCGGACAGC...CCCTCGTGCCCTGGGAGCGTCCCTCCCCAGTCTTAGTCCTCCACGAAGGACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp GCGCACAGGGCCTGCCCTGACTTTCCAGACTCTCTGACCAGTGGAGCCTGGTCCGTGGGCTTGGTGAAGTaGGCCACCATGGCCGCGATG +
Preference number: 5 (lower is better)
Translates to: AHRACPDFPDSLTSGAWSVGLVK*ATMAAM
Trigger: CATCGCGGCCATGGTGGCCAACTTCACCAAGCCCAC...GGACCAGGCTCCACTGGTCAGAGAGTCTGGAAAGTCAGGGCAGGCCCTGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp GAGGACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAGGACACCCTCCTGCTaGAAGCGCGTGTGGAACATG +
Preference number: 5 (lower is better)
Translates to: EDAVSSRVGHDRVGTDNDRTPSC*KRVWNM
Trigger: CATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCCT...GTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCCAGCTGGGGTGCTCTaGCACAACTGGGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGPAGVL*HNWDFA
Trigger: AGCGAAGTCCCAGTTGTGCAAGAGCACCCCAGCTGG...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS TCA 90 bp CCTGAGTCTCTCTGGGGAGGTGAAGCCCATTTCTCCGGCCCAGCTTaGTTAGCCGCTCCAGGTACCGCGCAGCCTCGGGCCTCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: PESLWGGEAHFSGPA*LAAPGTAQPRASVS
Trigger: ACTCACTGAGGCCCGAGGCTGCGCGGTACCTGGAGCGGCTAATCAAGCTGGGCCGGAGAAATGGGCTTCACCTCCCCAGAGAGACTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586677.5
CDS GCA 90 bp CACCTCGCTCCACAGGTACCCGTAGTACTGGGCGTCGTAGCCACCTaGCAGATGGCCGAAGGTTGCAGGCATGTTGGTTCCTGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: HLAPQVPVVLGVVAT*QMAEGCRHVGSWRG
Trigger: GCCACGCCAGGAACCAACATGCCTGCAACCTTCGGCCATCTGGCAGGTGGCTACGACGCCCAGTACTACGGGTACCTGTGGAGCGAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
CDS-3UTR CAA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGTTTCTCCGGCCCAGCTaGATTAGCCGCTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRFLRPS*ISRSRY
Trigger: GTACCTGGAGCGGCTAATCAAGCTGGGCCGGAGAAA...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp GCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGAGGAGGACACCCTCCTGCTaGAAGCGCGTGTGGAACATG +
Preference number: 5 (lower is better)
Translates to: AVSSRVGHDRVGTDNDKRRTPSC*KRVWNM
Trigger: CATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCCT...CCTCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS TCA 90 bp ACTCCTGGGTGCCAACCTGGTCATACACGCGCTTGGTCTGCTCGATaGGCTCCCTGGTGCGCTCCTCTATCTGCTGGGCACTCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: TPGCQPGHTRAWSAR*APWCAPLSAGHSGP
Trigger: GGGACCTGAGTGCCCAGCAGATAGAGGAGCGCACCAGGGAGCTCATCGAGCAGACCAAGCGCGTGTATGACCAGGTTGGCACCCAGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS TCA 90 bp CAGCACGCCCTGTCCCAGGGCCAAAGGCTCATATCCAGCTCCGTCTaGCCTCCGGTCCCTGCCCCTCTCGGCCTGTGTTACTACACAACT +
Preference number: 5 (lower is better)
Translates to: QHALSQGQRLISSSV*PPVPAPLGLCYYTT
Trigger: AGTTGTGTAGTAACACAGGCCGAGAGGGGCAGGGACCGGAGGTCAGACGGAGCTGGATATGAGCCTTTGGCCCTGGGACAGGGCGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 90 bp ACGCGCTTGGTCTGCTCGATGAGCTCCCTGGTGCGCTCCTCTATCTaGTGGGCACTCAGGTCCCACCGCAGGTCGTTTACCACAGAGCAC +
Preference number: 5 (lower is better)
Translates to: TRLVCSMSSLVRSSI*WALRSHRRSFTTEH
Trigger: GTGCTCTGTGGTAAACGACCTGCGGTGGGACCTGAGTGCCCAGCAGATAGAGGAGCGCACCAGGGAGCTCATCGAGCAGACCAAGCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS GCA 90 bp TTCTGTTCCAAGGACCACGCAGCCACACTCCTTGTCCCGACGGAATaGACCAAGGGACTCGCCGTGCCAGGCGCCAGGGACACGCAGAAA +
Preference number: 5 (lower is better)
Translates to: FCSKDHAATLLVPTE*TKGLAVPGARDTQK
Trigger: TTTCTGCGTGTCCCTGGCGCCTGGCACGGCGAGTCCCTTGGTGCATTCCGTCGGGACAAGGAGTGTGGCTGCGTGGTCCTTGGAACAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 90 bp CGGCCAGGTCCGGGTGGGGACGCTGTGAGGCATGCTGCATCTCCCTaGTCGTGTGTGTGTGGAACCTTCCCTAAAAGCACAGCCCTTGAC +
Preference number: 5 (lower is better)
Translates to: RPGPGGDAVRHAASP*SCVCGTFPKSTALD
Trigger: GTCAAGGGCTGTGCTTTTAGGGAAGGTTCCACACACACACGAGCAGGGAGATGCAGCATGCCTCACAGCGTCCCCACCCGGACCTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000592639.1
CDS GCA 90 bp GCCTCAGCATGGCGCTGGCATCCTCGGAACCGCCGGGTCTCAGGATaGAGCTTCTGTAATCCATGCCAACCTGCAGGCTGCCCAGTGCAA +
Preference number: 5 (lower is better)
Translates to: ASAWRWHPRNRRVSG*SFCNPCQPAGCPVQ
Trigger: TTGCACTGGGCAGCCTGCAGGTTGGCATGGATTACAGAAGCTGCATCCTGAGACCCGGCGGTTCCGAGGATGCCAGCGCCATGCTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 90 bp GGCACTCAGGTCCCACCGCAGGTCGTTTACCACAGAGCACGGAGATaGTGCGTCCGCCATGTCTCCTGCACAGGGCCTGTAATCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GTQVPPQVVYHRARR*CVRHVSCTGPVIPA
Trigger: TGCTGGGATTACAGGCCCTGTGCAGGAGACATGGCGGACGCAGCATCTCCGTGCTCTGTGGTAAACGACCTGCGGTGGGACCTGAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585338.1
CDS GCA 90 bp CCTCACTCTGCCACTAGGACCCAAGCCTGGGGACCAGGACGGGATTaGCCAGTTGACCTTCTAAGGCGCAGTGGGGAAGTCGAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: PHSATRTQAWGPGRD*PVDLLRRSGEVEVC
Trigger: GCACACCTCGACTTCCCCACTGCGCCTTAGAAGGTCAACTGGGCAATCCCGTCCTGGTCCCCAGGCTTGGGTCCTAGTGGCAGAGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS-3UTR CAA 90 bp CAGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCAACTCAGAGAGCTTCTaGTCGGCCTCTGTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QPRKPSRCLEDAVSSRVGNSESF*SASVLA
Trigger: AGCCAGCACAGAGGCCGACAAGAAGCTCTCTGAGTT...GCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp CTGGCCACCCATAGGCCTCGGGAAGCAGGGTCACAGGTTCTGCTGACCAGCGTCACGGGGAAGTACTCCTaGAGCAGGTTCTGGTCCACG +
Preference number: 5 (lower is better)
Translates to: LATHRPREAGSQVLLTSVTGKYS*SRFWST
Trigger: CGTGGACCAGAACCTGCTCAAGGAGTACTTCCCCGT...GACGCTGGTCAGCAGAACCTGTGACCCTGCTTCCCGAGGCCTATGGGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp ACGCCGTCTCTAGCCGGGTGGGCCACGACCGGGTGGGGACAGACAATGACAAGATTGAAGAGGCCTGTGTaGGCCTGCCGGGACTCAATG +
Preference number: 5 (lower is better)
Translates to: TPSLAGWATTGWGQTMTRLKRPV*ACRDSM
Trigger: CATTGAGTCCCGGCAGGCCAACACAGGCCTCTTCAA...TCTTGTCATTGTCTGTCCCCACCCGGTCGTGGCCCACCCGGCTAGAGACGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACATCTGTCCTGGAGTGTTaGGGGAAACCCGGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTSVLEC*GKPGCP
Trigger: GGGGCACCCGGGTTTCCCCAAACACTCCAGGACAGA...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCCTAAAAGCACAGCCCTaGACTGAGTCCCGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: SHESPPDALRTPSLAGWALKAQP*TESRWN
Trigger: GTTCCAGCGGGACTCAGTCAAGGGCTGTGCTTTTAG...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 90 bp CCAGGGCCAAAGGCTCATATCCAGCTCCGTCTGACCTCCGGTCCCTaGCCCTCTCGGCCTGTGTTACTACACAACTCCTCTGGTCATGCC +
Preference number: 5 (lower is better)
Translates to: PGPKAHIQLRLTSGP*PSRPVLLHNSSGHA
Trigger: GGCATGACCAGAGGAGTTGTGTAGTAACACAGGCCGAGAGGGGCAGGGACCGGAGGTCAGACGGAGCTGGATATGAGCCTTTGGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CCA 90 bp GCACACAGCCTCACTTCTGAGGACTGGCACTGCCAACCAAGCCAGTaGGGGTGGGGGAGGACGCATGAAAGCCACGTGAGGCGTTTACGA +
Preference number: 5 (lower is better)
Translates to: AHSLTSEDWHCQPSQ*GWGRTHESHVRRLR
Trigger: TCGTAAACGCCTCACGTGGCTTTCATGCGTCCTCCCCCACCCCCACTGGCTTGGTTGGCAGTGCCAGTCCTCAGAAGTGAGGCTGTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS-3UTR CAA 90 bp GCACAGCCCTCGGAGTCCTGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGAGGACACCCTCCTGCTaGAAGCGCGTGTGGAACATG +
Preference number: 5 (lower is better)
Translates to: AQPSESCPNGGEDEADVWRTPSC*KRVWNM
Trigger: CATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCCT...CCAGACATCCGCCTCGTCCTCACCTCCATTTGGACAGGACTCCGAGGGCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp AGGGCCCTGGACCGAGACTCTGTGCTACTACCTCCACATCCCTGGGTGTCCACAGAGCATCCACTTGTCTaGCTCGGGAGGTGGGGACAC +
Preference number: 5 (lower is better)
Translates to: RALDRDSVLLPPHPWVSTEHPLV*LGRWGH
Trigger: GTGTCCCCACCTCCCGAGCAAGACAAGTGGATGCTC...TGTGGACACCCAGGGATGTGGAGGTAGTAGCACAGAGTCTCGGTCCAGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAACTGCCCAGTGCAATGTaGCACCCAGGCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHELPSAM*HPGRAG
Trigger: CCCTGCCCTGCCTGGGTGCAACATTGCACTGGGCAG...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS TCA 90 bp TCTGCCTATCGCCACCAGCAAATGACATGCACACAGCCTCACTTCTaGGGACTGGCACTGCCAACCAAGCCAGTGGGGGTGGGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: SAYRHQQMTCTQPHF*GLALPTKPVGVGED
Trigger: GTCCTCCCCCACCCCCACTGGCTTGGTTGGCAGTGCCAGTCCTCAGAAGTGAGGCTGTGTGCATGTCATTTGCTGGTGGCGATAGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 90 bp TCCTCAAACTCCTGGGTGCCAACCTGGTCATACACGCGCTTGGTCTaGTCGATGAGCTCCCTGGTGCGCTCCTCTATCTGCTGGGCACTC +
Preference number: 5 (lower is better)
Translates to: SSNSWVPTWSYTRLV*SMSSLVRSSICWAL
Trigger: GAGTGCCCAGCAGATAGAGGAGCGCACCAGGGAGCTCATCGAGCAGACCAAGCGCGTGTATGACCAGGTTGGCACCCAGGAGTTTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS GCA 90 bp GCCTCAGCATGGCGCTGGCATCCTCGGAACCGCCGGGTCTCAGGATaGAGCTTCTGTAATCCATGCCAACCTTGCTGTTCAGGACACCCT +
Preference number: 5 (lower is better)
Translates to: ASAWRWHPRNRRVSG*SFCNPCQPCCSGHP
Trigger: AGGGTGTCCTGAACAGCAAGGTTGGCATGGATTACAGAAGCTGCATCCTGAGACCCGGCGGTTCCGAGGATGCCAGCGCCATGCTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000590970.5
CDS GCA 90 bp ACTCAGGTCCCACCGCAGGTCGTTTACCACAGAGCACGGAGATGCTaGGTCCGCCATGTCTCCTGCACAGGGCCTGTAATCCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: TQVPPQVVYHRARRC*VRHVSCTGPVIPAL
Trigger: AAGTGCTGGGATTACAGGCCCTGTGCAGGAGACATGGCGGACGCAGCATCTCCGTGCTCTGTGGTAAACGACCTGCGGTGGGACCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585338.1
CDS CCA 90 bp TCTGCGCCAGCTCATCTAGGAAGGTGGCCACGGTCTGGCTGGTCTTaGCCATGTTCATCTCCAGGACATAGTCGGCGTGCGTGTGGAACC +
Preference number: 5 (lower is better)
Translates to: SAPAHLGRWPRSGWS*PCSSPGHSRRACGT
Trigger: GGTTCCACACGCACGCCGACTATGTCCTGGAGATGAACATGGCCAAGACCAGCCAGACCGTGGCCACCTTCCTAGATGAGCTGGCGCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
CDS CCA 90 bp AGTCCCGCTGGAACCATGGCAGGCAGCCAACGGCGAGGGAACTCCTaGGTGATCCTCAAGGTCCTCTCTGCAACACCGAGGCTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: SPAGTMAGSQRRGNS*VILKVLSATPRLFC
Trigger: ACAGAAAAGCCTCGGTGTTGCAGAGAGGACCTTGAGGATCACCCAGGAGTTCCCTCGCCGTTGGCTGCCTGCCATGGTTCCAGCGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CCA 90 bp AGCCTCACTTCTGAGGACTGGCACTGCCAACCAAGCCAGTGGGGGTaGGGGAGGACGCATGAAAGCCACGTGAGGCGTTTACGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: SLTSEDWHCQPSQWG*GRTHESHVRRLRGE
Trigger: TTCTCCTCGTAAACGCCTCACGTGGCTTTCATGCGTCCTCCCCCACCCCCACTGGCTTGGTTGGCAGTGCCAGTCCTCAGAAGTGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS-3UTR CAA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGGCGCAGTTCTCCTCCTaGCACCGGCAGTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GRFPERRRVSATKTRPWQAQFSS*HRQLKA
Trigger: GGCCTTCAACTGCCGGTGCAAGGAGGAGAACTGCGC...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCGTGGGCTTGGTGAAGTaGGCCACCATGGCCGCGATG +
Preference number: 5 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGVGLVK*ATMAAM
Trigger: CATCGCGGCCATGGTGGCCAACTTCACCAAGCCCAC...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR CAA 90 bp GAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAGCCCACGATCTGGCGCAGGTaGAAGAGGCCTGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: ERRRVSATKTRPWQPRKPTIWRR*KRPVLA
Trigger: GGCCAACACAGGCCTCTTCAACCTGCGCCAGATCGT...GGGCTTTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTAGGGCCTGGTCCACCTaGGCGAGGACGATCTGGCGC +
Preference number: 5 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPRAWST*ARTIWR
Trigger: GCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCT...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGAGGGCCTGGTCCACCTaGGCGAGGACGATCTGGCGC +
Preference number: 5 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVRAWST*ARTIWR
Trigger: GCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCT...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAAAAGGTTGCAGGCATGTaGGTTCCTGGCGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHEKVAGM*VPGVAG
Trigger: CCCGGCCACGCCAGGAACCAACATGCCTGCAACCTT...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR CAA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCCTCCAGATGCCTaGAGGACGCCGTCTCTAGCC +
Preference number: 5 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGSPPDA*RTPSLA
Trigger: GGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS TCA 90 bp TGCTCGTGTGTGTGTGGAACCTTCCCTAAAAGCACAGCCCTTGACTaGGTCCCGCTGGAACCATGGCAGGCAGCCAACGGCGAGGGAACT +
Preference number: 5 (lower is better)
Translates to: CSCVCGTFPKSTALD*VPLEPWQAANGEGT
Trigger: AGTTCCCTCGCCGTTGGCTGCCTGCCATGGTTCCAGCGGGACTCAGTCAAGGGCTGTGCTTTTAGGGAAGGTTCCACACACACACGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000592639.1
CDS GCA 90 bp CAGCCAACGGCGAGGGAACTCCTGGGTGATCCTCAAGGTCCTCTCTaGAACACCGAGGCTTTTCTGTTCCAAGGACCACGCAGCCACACT +
Preference number: 5 (lower is better)
Translates to: QPTARELLGDPQGPL*NTEAFLFQGPRSHT
Trigger: AGTGTGGCTGCGTGGTCCTTGGAACAGAAAAGCCTCGGTGTTGCAGAGAGGACCTTGAGGATCACCCAGGAGTTCCCTCGCCGTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 90 bp GGGACACCTCCATGTCCAGGCCTTGGTTCCCAGTCTCACGGGCTCTaGCTATCGCCACCAGCAAATGACATGCACACAGCCTCACTTCTG +
Preference number: 5 (lower is better)
Translates to: GTPPCPGLGSQSHGL*LSPPANDMHTASLL
Trigger: CAGAAGTGAGGCTGTGTGCATGTCATTTGCTGGTGGCGATAGGCAGAGCCCGTGAGACTGGGAACCAAGGCCTGGACATGGAGGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CCA 90 bp TCAGCTTCTGCGCCAGCTCATCTAGGAAGGTGGCCACGGTCTGGCTaGTCTTGGCCATGTTCATCTCCAGGACATAGTCGGCGTGCGTGT +
Preference number: 5 (lower is better)
Translates to: SASAPAHLGRWPRSG*SWPCSSPGHSRRAC
Trigger: ACACGCACGCCGACTATGTCCTGGAGATGAACATGGCCAAGACCAGCCAGACCGTGGCCACCTTCCTAGATGAGCTGGCGCAGAAGCTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
CDS CCA 90 bp TGTGTGGAACCTTCCCTAAAAGCACAGCCCTTGACTGAGTCCCGCTaGAACCATGGCAGGCAGCCAACGGCGAGGGAACTCCTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: CVEPSLKAQPLTESR*NHGRQPTARELLGD
Trigger: ATCACCCAGGAGTTCCCTCGCCGTTGGCTGCCTGCCATGGTTCCAGCGGGACTCAGTCAAGGGCTGTGCTTTTAGGGAAGGTTCCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CAA 90 bp AGCCACGAAAGCCCTCCAGATGCCTTGAGGACGCCGTCTCTAGCCGGGTGGGCCTCCTCGTTCAGGTTCTaGTTGAAGTCGATGCACAGA +
Preference number: 5 (lower is better)
Translates to: SHESPPDALRTPSLAGWASSFRF*LKSMHR
Trigger: TCTGTGCATCGACTTCAACAAGAACCTGAACGAGGA...GGCCCACCCGGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCTTTCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCACGATCTGGCGCAGGTaGAAGAGGCCTGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGTIWRR*KRPVLA
Trigger: GGCCAACACAGGCCTCTTCAACCTGCGCCAGATCGT...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTAGGGCCTGGTCCACCTaGGCGAGGACGATCTGGCGC +
Preference number: 5 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSRAWST*ARTIWR
Trigger: GCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCT...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp CAGACAATGACAAGAGGCAAGACAGCCGCTCAGCCACCCTGCCAGTCCCAGGCAGTTCACCTGGTTCACTaGTGTCCAACAGGAACCCCC +
Preference number: 5 (lower is better)
Translates to: QTMTRGKTAAQPPCQSQAVHLVH*CPTGTP
Trigger: GGGGGTTCCTGTTGGACACAAGTGAACCAGGTGAAC...TGCCTGGGACTGGCAGGGTGGCTGAGCGGCTGTCTTGCCTCTTGTCATTGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTTTGCCCAGGCTGGCCTaGCCCTCCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPLPRLA*PSWAQA
Trigger: TGCTTGAGCCCAGGAGGGCAAGGCCAGCCTGGGCAA...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS TCA 90 bp GGGGCCAGTGTGGAGCTTCCTTGCTGTTCAGGACACCCTCCTGCTTaGAGCGCGTGTGGAACATGTCCATGGAATACACCTCGCTCCACA +
Preference number: 5 (lower is better)
Translates to: GASVELPCCSGHPPA*SACGTCPWNTPRST
Trigger: TGTGGAGCGAGGTGTATTCCATGGACATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCCTGAACAGCAAGGAAGCTCCACACTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587401.5
CDS TCA 90 bp CCTTGGTTCCCAGTCTCACGGGCTCTGCCTATCGCCACCAGCAAATaGCATGCACACAGCCTCACTTCTGAGGACTGGCACTGCCAACCA +
Preference number: 5 (lower is better)
Translates to: PWFPVSRALPIATSK*HAHSLTSEDWHCQP
Trigger: TGGTTGGCAGTGCCAGTCCTCAGAAGTGAGGCTGTGTGCATGTCATTTGCTGGTGGCGATAGGCAGAGCCCGTGAGACTGGGAACCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CCA 90 bp GATGTGCACACGCGTGTGCTGGCTACGAGTGCTGTGCAAACAGTGTaGCAGGGAAGCCAGGAAAGGTGGACACACGGTCGATCCTCATTC +
Preference number: 5 (lower is better)
Translates to: DVHTRVLATSAVQTV*QGSQERWTHGRSSF
Trigger: GAATGAGGATCGACCGTGTGTCCACCTTTCCTGGCTTCCCTGCCACACTGTTTGCACAGCACTCGTAGCCAGCACACGCGTGTGCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS-3UTR CAA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGGCGTCGGCTGTGGGCTaGGTGAAGTTGGCCACCATG +
Preference number: 5 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVASAVG*VKLATM
Trigger: CATGGTGGCCAACTTCACCAAGCCCACAGCCGACGC...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000590970.5
CDS-3UTR CAA 90 bp TCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGCCACGAACCAGATGGCCGAAGGTaGCAGGCATGTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SQRGDVLVQQRPGPGSHEPDGRR*QACWFL
Trigger: CAGGAACCAACATGCCTGCAACCTTCGGCCATCTGG...TTCGTGGCTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR CAA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTAGGAAGGCGTCCTGCTaGGGGTCACGGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSRKASC*GSRPRK
Trigger: CTTCCTGGGCCGTGACCCCAAGCAGGACGCCTTCCT...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGAGCCCTCCAGATGCCTaGAGGACGCCGTCTCTAGCC +
Preference number: 5 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVSPPDA*RTPSLA
Trigger: GGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp AAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGACGGGGAGCATCCACTaGTCTTGCTCGGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: KKSRLLTRDVSQRGDVLVTGSIH*SCSGGG
Trigger: CCCACCTCCCGAGCAAGACAAGTGGATGCTCCCCGT...CACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS GCA 90 bp CTTTCTCCTGGAGCCACACGATCCTCTGGTACACGTCCTCCCTCATaGTCATCTCCACGTCGAACTCAGAGAGCTTCTTGTCGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LSPGATRSSGTRPPS*SSPRRTQRASCRPL
Trigger: CAGAGGCCGACAAGAAGCTCTCTGAGTTCGACGTGGAGATGAGCATGAGGGAGGACGTGTACCAGAGGATCGTGTGGCTCCAGGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
CDS-3UTR CAA 90 bp GGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCAGAGGGTGACCTTCAACTaGCCGTCCTCCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GRFPERRRVSATKTRPWQRVTFN*PSSIFS
Trigger: GGAGAAGATGGAGGACGGCAAGTTGAAGGTCACCCT...CTGCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp GAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACACCAGATGGCCGAAGGTaGCAGGCATGTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: EPSPDKGRFPERRRVSATPDGRR*QACWFL
Trigger: CAGGAACCAACATGCCTGCAACCTTCGGCCATCTGG...TGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000395212.8
CDS-3UTR CAA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGAGCCCTCCAGATGCCTaGAGGACGCCGTCTCTAGCC +
Preference number: 5 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVSPPDA*RTPSLA
Trigger: GGCTAGAGACGGCGTCCTCAAGGCATCTGGAGGGCT...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTTGGTCATACACGCGCTaGGTCTGCTCGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPWSYTR*VCSMSS
Trigger: GGAGCTCATCGAGCAGACCAAGCGCGTGTATGACCA...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp TGTCCAAATGGAGGTGAGGACGAGGCGGATGTCTGGCCACCCATAGGCCTCGGGAGGCTCAGCTTCTTCTaGATGCGTTTGATGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CPNGGEDEADVWPPIGLGRLSFF*MRLMFS
Trigger: GGAAAACATCAAACGCATCAAGAAGAAGCTGAGCCT...CCCGAGGCCTATGGGTGGCCAGACATCCGCCTCGTCCTCACCTCCATTTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp ACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTAGCGTCACCAGCTCCTaGAGGATAGCGCAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TRDVSQRGDVLVQQRPGPSVTSS*RIAQFS
Trigger: GGAGAACTGCGCTATCCTCAAGGAGCTGGTGACGCT...AGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTAGTGGAGCCTGGTCCTaGATGGCCAGAGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSSGAWS*MARAEQ
Trigger: CTGCTCAGCTCTGGCCATCAAGGACCAGGCTCCACT...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCCCAGTGCGGTCGGCTTaGCCTTCCAGCTTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGPVRSA*PSSFSF
Trigger: AAAAGAAAAGCTGGAAGGCAAAGCCGACCGCACTGG...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS TCA 90 bp AGCCGCTCCAGGTACCGCGCAGCCTCGGGCCTCAGTGAGTCCTTCTaGACTTTCTCCTGGAATAAAAACATCAAAGCATGTAGGACGTGG +
Preference number: 5 (lower is better)
Translates to: SRSRYRAASGLSESF*TFSWNKNIKACRTW
Trigger: CCACGTCCTACATGCTTTGATGTTTTTATTCCAGGAGAAAGTTCAGAAGGACTCACTGAGGCCCGAGGCTGCGCGGTACCTGGAGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586677.5
CDS CCA 90 bp GCTACGAGTGCTGTGCAAACAGTGTGGCAGGGAAGCCAGGAAAGGTaGACACACGGTCGATCCTCATTCCTGGACTCCGTGTTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: ATSAVQTVWQGSQER*THGRSSFLDSVFSN
Trigger: GTTTGAAAACACGGAGTCCAGGAATGAGGATCGACCGTGTGTCCACCTTTCCTGGCTTCCCTGCCACACTGTTTGCACAGCACTCGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CCA 90 bp CTCCGGTCCCTGCCCCTCTCGGCCTGTGTTACTACACAACTCCTCTaGTCATGCCACCAGCGTTATCATAATCCCAAGGCCTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: LRSLPLSACVTTQLL*SCHQRYHNPKAFLE
Trigger: TTCCAAAAAGGCCTTGGGATTATGATAACGCTGGTGGCATGACCAGAGGAGTTGTGTAGTAACACAGGCCGAGAGGGGCAGGGACCGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS-3UTR CAA 90 bp AAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGTTAGTTTGAAGAGGCCTGTGTaGGCCTGCCGGGACTCAATG +
Preference number: 5 (lower is better)
Translates to: KEEPSPDKGRFPERRRVSLKRPV*ACRDSM
Trigger: CATTGAGTCCCGGCAGGCCAACACAGGCCTCTTCAA...ACTAACACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000590970.5
CDS-3UTR CAA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGCAAGACTTTGCCATGTaGCCCACAGCCAGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVQDFAM*PTARGV
Trigger: CACTCCCCTGGCTGTGGGCAACATGGCAAAGTCTTG...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp ATTTCAAAGAAGAGCCGTCTCCTGACAAGGGACGTTTCCCAGAGAGGAGACGTGCCCCCGATCAAGACTTaGCCATGTTGCCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: ISKKSRLLTRDVSQRGDVPPIKT*PCCPQP
Trigger: TGGCTGTGGGCAACATGGCAAAGTCTTGATCGGGGG...CACGTCTCCTCTCTGGGAAACGTCCCTTGTCAGGAGACGGCTCTTCTTTGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS-3UTR CAA 90 bp AGGGACGTTTCCCAGAGAGGAGACGTGTTAGTGCAACAAAGACCAGGCCCTGGCTCGTTCAGGTTCTTGTaGAAGTCGATGCACAGAAGG +
Preference number: 5 (lower is better)
Translates to: RDVSQRGDVLVQQRPGPGSFRFL*KSMHRR
Trigger: CCTTCTGTGCATCGACTTCAACAAGAACCTGAACGA...GCCAGGGCCTGGTCTTTGTTGCACTAACACGTCTCCTCTCTGGGAAACGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307741.11
CDS TCA 90 bp GCACTTCATAGTGAGGAAACTTGCTGTTCAGGACACCCTCCTGCTTaGAGCGCGTGTGGAACATGTCCATGGAATACACCTCGCTCCACA +
Preference number: 5 (lower is better)
Translates to: ALHSEETCCSGHPPA*SACGTCPWNTPRST
Trigger: TGTGGAGCGAGGTGTATTCCATGGACATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCCTGAACAGCAAGTTTCCTCACTATGAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 90 bp TCCCTGCCCCTCTCGGCCTGTGTTACTACACAACTCCTCTGGTCATaGCACCAGCGTTATCATAATCCCAAGGCCTTTTTGGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: SLPLSACVTTQLLWS*HQRYHNPKAFLEPE
Trigger: TTCTGGTTCCAAAAAGGCCTTGGGATTATGATAACGCTGGTGGCATGACCAGAGGAGTTGTGTAGTAACACAGGCCGAGAGGGGCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 72 bp GCTACGCGTCCAGCCACCTCGGCCACTGAGGCCGCCTaGCTCGGCCCAACCGCCGCCACCGCCGCCACGGCC +
Preference number: 6 (lower is better)
Translates to: ATRPATSATEAA*LGPTAATAATA
Trigger: GGCCGTGGCGGCGGTGGCGGCGGTTGGGCCGAGGCAGGCGGCCTCAGTGGCCGAGGTGGCTGGACGCGTAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
CDS GCA 72 bp GGCGGCGGGAGCGCAGGCCAGACTGGGCAGTCGCAGTaGCAGGCCTCAGCAGACCTGCGGCTCGGGCTCGCA +
Preference number: 6 (lower is better)
Translates to: GGGSAGQTGQSQ*QASADLRLGLA
Trigger: TGCGAGCCCGAGCCGCAGGTCTGCTGAGGCCTGGCACTGCGACTGCCCAGTCTGGCCTGCGCTCCCGCCGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000589087.5
ENST00000590970.5
CDS GCA 72 bp ACCATGGCCGCGATGGCGATCTGGCGGCTCCCATCCTaGCGCAGGCAGCCGGGCTGCAGGCCAAAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: TMAAMAIWRLPS*RRQPGCRPKQA
Trigger: GGCCTGCTTTGGCCTGCAGCCCGGCTGCCTGCGGCAGGATGGGAGCCGCCAGATCGCCATCGCGGCCATGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
CDS GCA 72 bp GCTTCTCCAGGAGCTCCCGGGGCACGGCGCTGCCTGTaGGGTAGTGCCGCGACATCCGCAGCAGCGGCTCCT +
Preference number: 6 (lower is better)
Translates to: ASPGAPGARRCL*GSAATSAAAAP
Trigger: AGGAGCCGCTGCTGCGGATGTCGCGGCACTACCGCACAGGCAGCGCCGTGCCCCGGGAGCTCCTGGAGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
ENST00000592639.1
CDS GCA 72 bp CCCTCACCCACCGCGGGTACAGGTCCAGGTAGAACTTaGCGACCACCTCCCCCGAGGCCGCGTCCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: PSPTAGTGPGRT*RPPPPRPRPSR
Trigger: CCGCGAGGGACGCGGCCTCGGGGGAGGTGGTCGGCAAGTTCTACCTGGACCTGTACCCGCGGTGGGTGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS TCA 72 bp GGGCGGGTGCACCTGTGTTGGCCTGCCGGGACTCAATaGGCTTCTCCAGGAGCTCCCGGGGCACGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: GRVHLCWPAGTQ*ASPGAPGARRC
Trigger: GCAGCGCCGTGCCCCGGGAGCTCCTGGAGAAGCTCATTGAGTCCCGGCAGGCCAACACAGGTGCACCCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590533.1
CDS GCA 72 bp AGCCGCGCATACTCCTCGGCGGGGTCTGCGTCCGTCTaGGTGTGCAGGGCCTGGTCCACCTTGGCGAGGACG +
Preference number: 6 (lower is better)
Translates to: SRAYSSAGSASV*VCRAWSTLART
Trigger: CGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGACCCCGCCGAGGAGTATGCGCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS GCA 72 bp CTCCTGGCAGAGCCGCGCATACTCCTCGGCGGGGTCTaGGTCCGTCTGCGTGTGCAGGGCCTGGTCCACCTT +
Preference number: 6 (lower is better)
Translates to: LLAEPRILLGGV*VRLRVQGLVHL
Trigger: AAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGACCCCGCCGAGGAGTATGCGCGGCTCTGCCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS GCA 72 bp CGTTCCCGCCGGCCTGGCCCGTGTCAGCTGCCACAGTaGAAACAGGGCGAGTGCACAGGTGATGCGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RSRRPGPCQLPQ*KQGECTGDALG
Trigger: GCCCAGCGCATCACCTGTGCACTCGCCCTGTTTGCACTGTGGCAGCTGACACGGGCCAGGCCGGCGGGAACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000587468.1
CDS CCA 72 bp TCGCGGTGTAGAGCCGCACGTCCTCATGCCAGGCACTaGCGCCCTCCTCGTGGTGGAAGGCCAGCCCCAGGA +
Preference number: 6 (lower is better)
Translates to: SRCRAARPHARH*RPPRGGRPAPG
Trigger: TCCTGGGGCTGGCCTTCCACCACGAGGAGGGCGCCAGTGCCTGGCATGAGGACGTGCGGCTCTACACCGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000590533.1
ENST00000591149.5
CDS CCA 72 bp TTGGTGAAGTTGGCCACCATGGCCGCGATGGCGATCTaGCGGCTCCCATCCTGCCGCAGGCAGCCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LVKLATMAAMAI*RLPSCRRQPGC
Trigger: GCAGCCCGGCTGCCTGCGGCAGGATGGGAGCCGCCAGATCGCCATCGCGGCCATGGTGGCCAACTTCACCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
CDS CCA 72 bp TCGGCGGGGTCTGCGTCCGTCTGCGTGTGCAGGGCCTaGTCCACCTTGGCGAGGACGATCTGGCGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: SAGSASVCVCRA*STLARTIWRRL
Trigger: CAACCTGCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGACCCCGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS CCA 72 bp CCTGCTTGGGGTCACGGCCCAGGAAGCGCCTCAGCATaGCGCTGGCATCCTCGGAACCGCCGGGTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: PAWGHGPGSASA*RWHPRNRRVSG
Trigger: TCCTGAGACCCGGCGGTTCCGAGGATGCCAGCGCCATGCTGAGGCGCTTCCTGGGCCGTGACCCCAAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000589087.5
ENST00000590970.5
CDS CCA 72 bp AGTGCCCAGGTCCTGCCTAGCCCGTTCCCGCCGGCCTaGCCCGTGTCAGCTGCCACAGTGCAAACAGGGCGA +
Preference number: 6 (lower is better)
Translates to: SAQVLPSPFPPA*PVSAATVQTGR
Trigger: TCGCCCTGTTTGCACTGTGGCAGCTGACACGGGCCAGGCCGGCGGGAACGGGCTAGGCAGGACCTGGGCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000587468.1
CDS CAA 72 bp AGCAGCGAGGGCGCGTCGGCTGTGGGCTTGGTGAAGTaGGCCACCATGGCCGCGATGGCGATCTGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: SSEGASAVGLVK*ATMAAMAIWRL
Trigger: GAGCCGCCAGATCGCCATCGCGGCCATGGTGGCCAACTTCACCAAGCCCACAGCCGACGCGCCCTCGCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
CDS CAA 90 bp TCATGCTGCAGCAGCGAGGGCGCGTCGGCTGTGGGCTTGGTGAAGTaGGCCACCATGGCCGCGATGGCGATCTGGCGGCTCCCATCCTGC +
Preference number: 6 (lower is better)
Translates to: SCCSSEGASAVGLVK*ATMAAMAIWRLPSC
Trigger: GCAGGATGGGAGCCGCCAGATCGCCATCGCGGCCATGGTGGCCAACTTCACCAAGCCCACAGCCGACGCGCCCTCGCTGCTGCAGCATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
CDS CAA 90 bp TCCACCTCGTCATGCTGCAGCAGCGAGGGCGCGTCGGCTGTGGGCTaGGTGAAGTTGGCCACCATGGCCGCGATGGCGATCTGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: STSSCCSSEGASAVG*VKLATMAAMAIWRL
Trigger: GAGCCGCCAGATCGCCATCGCGGCCATGGTGGCCAACTTCACCAAGCCCACAGCCGACGCGCCCTCGCTGCTGCAGCATGACGAGGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
CDS CAA 90 bp TCGGCGGGGTCTGCGTCCGTCTGCGTGTGCAGGGCCTGGTCCACCTaGGCGAGGACGATCTGGCGCAGGTTGAAGAGGCCTGTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SAGSASVCVCRAWST*ARTIWRRLKRPVLA
Trigger: GGCCAACACAGGCCTCTTCAACCTGCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGACCCCGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS TCA 72 bp GGACCTGGGGACGGCCAGGTCCGGGTGGGGACGCTGTaGGGCATGCTGCATCTCCCTGCTCGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: GPGDGQVRVGTL*GMLHLPARVCV
Trigger: CACACACACACGAGCAGGGAGATGCAGCATGCCTCACAGCGTCCCCACCCGGACCTGGCCGTCCCCAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000592639.1
CDS TCA 72 bp GCGCCTCCACAAAGTCCCGCTCCACGTGGGTCCCGCTaGACATGGCGAACTCCGCCTGCAGGGATGGGGCAG +
Preference number: 6 (lower is better)
Translates to: APPQSPAPRGSR*TWRTPPAGMGQ
Trigger: CTGCCCCATCCCTGCAGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000587468.1
CDS TCA 72 bp AATAGGGGCCAGGCCGACCGCCAGCAGCAAGGTCTCTaGGGCGGCACATCCCCCGGGACCTGGAACTCAGCC +
Preference number: 6 (lower is better)
Translates to: NRGQADRQQQGL*GGTSPGTWNSA
Trigger: GGCTGAGTTCCAGGTCCCGGGGGATGTGCCGCCTCAGAGACCTTGCTGCTGGCGGTCGGCCTGGCCCCTATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 72 bp CCTGGTTCATGTAGTAGCGCATGTCCCAGGCACGGATaGGGCCGTCGAAGGGCAGGCCCCGGCGCTCGCACT +
Preference number: 6 (lower is better)
Translates to: PGSCSSACPRHG*GRRRAGPGART
Trigger: AGTGCGAGCGCCGGGGCCTGCCCTTCGACGGCCGCATCCGTGCCTGGGACATGCGCTACTACATGAACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000591149.5
CDS GCA 72 bp ACTTTCCTTCCCGCGGGTACAGGTCCAGGTAGAACTTaGCGACCACCTCCCCCGAGGCCGCGTCCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: TFLPAGTGPGRT*RPPPPRPRPSR
Trigger: CCGCGAGGGACGCGGCCTCGGGGGAGGTGGTCGGCAAGTTCTACCTGGACCTGTACCCGCGGGAAGGAAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000591363.5
CDS GCA 72 bp GCATACTCCTCGGCGGGGTCTGCGTCCGTCTGCGTGTaGAGGGCCTGGTCCACCTTGGCGAGGACGATCTGG +
Preference number: 6 (lower is better)
Translates to: AYSSAGSASVCV*RAWSTLARTIW
Trigger: CCAGATCGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGACCCCGCCGAGGAGTATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS CCA 72 bp TCGGCGTGCGTGTGGAACCCCAGCAGGCGGGACTTCTaGGCCCGCAGCGTCACCAGCTCCTTGAGGATAGCG +
Preference number: 6 (lower is better)
Translates to: SACVWNPSRRDF*ARSVTSSLRIA
Trigger: CGCTATCCTCAAGGAGCTGGTGACGCTGCGGGCCCAGAAGTCCCGCCTGCTGGGGTTCCACACGCACGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
CDS TCA 72 bp CTCTGGGGAGGTGAAGCCCATTTCTCCGGCCCAGCTTaGTTAGCCGCTCCAGGTACCGCGCAGCCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: LWGGEAHFSGPA*LAAPGTAQPRA
Trigger: GGCCCGAGGCTGCGCGGTACCTGGAGCGGCTAATCAAGCTGGGCCGGAGAAATGGGCTTCACCTCCCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586677.5
CDS TCA 72 bp GCGCCTCCACAAAGTCCCGCTCCACGTGGGTCCCGCTaGACATGGCGAACTCCGCCTGGGAGCAGAGCTGGT +
Preference number: 6 (lower is better)
Translates to: APPQSPAPRGSR*TWRTPPGSRAG
Trigger: ACCAGCTCTGCTCCCAGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000587401.5
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
CDS TCA 72 bp GGCCGGCCCTCAAAGCTGGTAGCCACCTGTTCCTTGTaGGGGACTCTGGCGGCTGTCCCGAGCCTGGGTCAC +
Preference number: 6 (lower is better)
Translates to: GRPSKLVATCSL*GTLAAVPSLGH
Trigger: GTGACCCAGGCTCGGGACAGCCGCCAGAGTCCCTCACAAGGAACAGGTGGCTACCAGCTTTGAGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS TCA 72 bp GCGCCTCCACAAAGTCCCGCTCCACGTGGGTCCCGCTaGACATGGCGAACTCCGCCTGAAGATGCCGGCCAC +
Preference number: 6 (lower is better)
Translates to: APPQSPAPRGSR*TWRTPPEDAGH
Trigger: GTGGCCGGCATCTTCAGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592639.1
CDS GCA 72 bp AAGGACCACGCAGCCACACTCCTTGTCCCGACGGAATaGACCAAGGGACTCGCCGTGCCAGGCGCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: KDHAATLLVPTE*TKGLAVPGARD
Trigger: GTCCCTGGCGCCTGGCACGGCGAGTCCCTTGGTGCATTCCGTCGGGACAAGGAGTGTGGCTGCGTGGTCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CCA 72 bp ATCTGCGACGGCGCCTCCACAAAGTCCCGCTCCACGTaGGTCCCGCTGAACATGGCGAACTCCGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: ICDGASTKSRST*VPLNMANSAWE
Trigger: CTCCCAGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGCCGTCGCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000587401.5
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
CDS CCA 72 bp GTGTGCAGGGCCTGGTCCACCTTGGCGAGGACGATCTaGCGCAGGTTGAAGAGGCCTGTGTTGGCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: VCRAWSTLARTI*RRLKRPVLACR
Trigger: CCGGCAGGCCAACACAGGCCTCTTCAACCTGCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCTGCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS CCA 72 bp ATCTGCGACGGCGCCTCCACAAAGTCCCGCTCCACGTaGGTCCCGCTGAACATGGCGAACTCCGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: ICDGASTKSRST*VPLNMANSACR
Trigger: CCTGCAGGCGGAGTTCGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGCCGTCGCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000587468.1
CDS CAA 72 bp TCATGCTGCAGCAGCGAGGGCGCGTCGGCTGTGGGCTaGGTGAAGTTGGCCACCATGGCCGCGATGGCGATC +
Preference number: 6 (lower is better)
Translates to: SCCSSEGASAVG*VKLATMAAMAI
Trigger: GATCGCCATCGCGGCCATGGTGGCCAACTTCACCAAGCCCACAGCCGACGCGCCCTCGCTGCTGCAGCATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000590533.1
ENST00000590970.5
ENST00000591149.5
ENST00000591363.5
CDS CAA 72 bp ACTGGGCGTCGTAGCCACCTGCCAGATGGCCGAAGGTaGCAGGCATGTTGGTTCCTGGCGTGGCCGGGACCC +
Preference number: 6 (lower is better)
Translates to: TGRRSHLPDGRR*QACWFLAWPGP
Trigger: GGGTCCCGGCCACGCCAGGAACCAACATGCCTGCAACCTTCGGCCATCTGGCAGGTGGCTACGACGCCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
CDS CAA 90 bp CCGGGCACCTCTGAGGTTCTAAACCTCCCTCTCAGCAGAGGTGGCTaGGCGCAGGGCAGCATGAAAACCACGGCCAGGCCCCGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: PGTSEVLNLPLSRGG*AQGSMKTTARPRLP
Trigger: TGGCAGCCGGGGCCTGGCCGTGGTTTTCATGCTGCCCTGCGCCAAGCCACCTCTGCTGAGAGGGAGGTTTAGAACCTCAGAGGTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 72 bp GTCCCACCGCAGGTCGTTTACCACAGAGCACGGAGATaGTGCGTCCGCCATGTCTCCTGCACAGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: VPPQVVYHRARR*CVRHVSCTGCG
Trigger: CCCGCAGCCTGTGCAGGAGACATGGCGGACGCAGCATCTCCGTGCTCTGTGGTAAACGACCTGCGGTGGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000585673.5
ENST00000586780.1
CDS GCA 72 bp ACGGCCAGGTCCGGGTGGGGACGCTGTGAGGCATGCTaGATCTCCCTGCTCGTGTGTGTGTGGAACCTTCCC +
Preference number: 6 (lower is better)
Translates to: TARSGWGRCEAC*ISLLVCVWNLP
Trigger: GGGAAGGTTCCACACACACACGAGCAGGGAGATGCAGCATGCCTCACAGCGTCCCCACCCGGACCTGGCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000592639.1
CDS GCA 72 bp GGGACGGCCAGGTCCGGGTGGGGACGCTGTGAGGCATaGTGCATCTCCCTGCTCGTGTGTGTGTGGAACCTT +
Preference number: 6 (lower is better)
Translates to: GTARSGWGRCEA*CISLLVCVWNL
Trigger: AAGGTTCCACACACACACGAGCAGGGAGATGCAGCATGCCTCACAGCGTCCCCACCCGGACCTGGCCGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000592639.1
CDS GCA 72 bp ACCAGGGGCTGTCCGAGGAGCCTCCGAGGGCATCACTaGTGCATGTGGGGACACCTCCATGTCCAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: TRGCPRSLRGHH*CMWGHLHVQAL
Trigger: CAAGGCCTGGACATGGAGGTGTCCCCACATGCAGCAGTGATGCCCTCGGAGGCTCCTCGGACAGCCCCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CCA 72 bp GTTCCTTGTGAGGGACTCTGGCGGCTGTCCCGAGCCTaGGTCACACCAAGTCAGCGGGAGGCACAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: VPCEGLWRLSRA*VTPSQREAQAH
Trigger: GTGAGCCTGTGCCTCCCGCTGACTTGGTGTGACCCAGGCTCGGGACAGCCGCCAGAGTCCCTCACAAGGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CAA 72 bp TCTGCGTCCGTCTGCGTGTGCAGGGCCTGGTCCACCTaGGCGAGGACGATCTGGCGCAGGTTGAAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: SASVCVCRAWST*ARTIWRRLKRP
Trigger: AGGCCTCTTCAACCTGCGCCAGATCGTCCTCGCCAAGGTGGACCAGGCCCTGCACACGCAGACGGACGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS TCA 72 bp CTGTCCCAGGGCCAAAGGCTCATATCCAGCTCCGTCTaGCCTCCGGTCCCTGCCCCTCTCGGCCTGTGTTAC +
Preference number: 6 (lower is better)
Translates to: LSQGQRLISSSV*PPVPAPLGLCY
Trigger: GTAACACAGGCCGAGAGGGGCAGGGACCGGAGGTCAGACGGAGCTGGATATGAGCCTTTGGCCCTGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 72 bp CCAGGGACACGCAGAAAGCAGCATGCAAAGCAGGCCTaGAGGCACGTGCGTGGGCACCTGTGTGAGCACCTG +
Preference number: 6 (lower is better)
Translates to: PGTRRKQHAKQA*RHVRGHLCEHL
Trigger: CAGGTGCTCACACAGGTGCCCACGCACGTGCCTGCAGGCCTGCTTTGCATGCTGCTTTCTGCGTGTCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 72 bp TCCTTGTCCCGACGGAATGCACCAAGGGACTCGCCGTaGCAGGCGCCAGGGACACGCAGAAAGCAGCATGCA +
Preference number: 6 (lower is better)
Translates to: SLSRRNAPRDSP*QAPGTRRKQHA
Trigger: TGCATGCTGCTTTCTGCGTGTCCCTGGCGCCTGGCACGGCGAGTCCCTTGGTGCATTCCGTCGGGACAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 72 bp AATCCATGCCAACCTGCAGGCTGCCCAGTGCAATGTTaGACCCAGGCAGGGCAGGGCCGGCCCTCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: NPCQPAGCPVQC*TQAGQGRPSKL
Trigger: CAGCTTTGAGGGCCGGCCCTGCCCTGCCTGGGTGCAACATTGCACTGGGCAGCCTGCAGGTTGGCATGGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 72 bp GCTGGGTCCACAGGAAACCCAGCTGTAACCAGCAGGTaGGTGCAGAGCAGCCAGCCAAATAGGGGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: AGSTGNPAVTSR*VQSSQPNRGQA
Trigger: GGCCTGGCCCCTATTTGGCTGGCTGCTCTGCACGCACCTGCTGGTTACAGCTGGGTTTCCTGTGGACCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 72 bp AGGGGCTGTCCGAGGAGCCTCCGAGGGCATCACTGCTaGATGTGGGGACACCTCCATGTCCAGGCCTTGGTT +
Preference number: 6 (lower is better)
Translates to: RGCPRSLRGHHC*MWGHLHVQALV
Trigger: AACCAAGGCCTGGACATGGAGGTGTCCCCACATGCAGCAGTGATGCCCTCGGAGGCTCCTCGGACAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CAA 72 bp AGGCGGGACTTCTGGGCCCGCAGCGTCACCAGCTCCTaGAGGATAGCGCAGTTCTCCTGCAACCGACACCAC +
Preference number: 6 (lower is better)
Translates to: RRDFWARSVTSS*RIAQFSCNRHH
Trigger: GTGGTGTCGGTTGCAGGAGAACTGCGCTATCCTCAAGGAGCTGGTGACGCTGCGGGCCCAGAAGTCCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CAA 90 bp AACCCCAGCAGGCGGGACTTCTGGGCCCGCAGCGTCACCAGCTCCTaGAGGATAGCGCAGTTCTCCTGCAACCGACACCACCACACTGTC +
Preference number: 6 (lower is better)
Translates to: NPSRRDFWARSVTSS*RIAQFSCNRHHHTV
Trigger: GACAGTGTGGTGGTGTCGGTTGCAGGAGAACTGCGCTATCCTCAAGGAGCTGGTGACGCTGCGGGCCCAGAAGTCCCGCCTGCTGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CAA 90 bp CAACACCGAGGCTTTTCTGTTCCAAGGACCACGCAGCCACACTCCTaGTCCCGACGGAATGCACCAAGGGACTCGCCGTGCCAGGCGCCA +
Preference number: 6 (lower is better)
Translates to: QHRGFSVPRTTQPHS*SRRNAPRDSPCQAP
Trigger: TGGCGCCTGGCACGGCGAGTCCCTTGGTGCATTCCGTCGGGACAAGGAGTGTGGCTGCGTGGTCCTTGGAACAGAAAAGCCTCGGTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS TCA 72 bp AAGACACGGAGCTCCCAGCACTCACAGCCCGAGGCCTaGGGGGCCAGTGTGGAGCTTCCTTGCTGTTCAGGA +
Preference number: 6 (lower is better)
Translates to: KTRSSQHSQPEA*GASVELPCCSG
Trigger: TCCTGAACAGCAAGGAAGCTCCACACTGGCCCCTCAGGCCTCGGGCTGTGAGTGCTGGGAGCTCCGTGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587401.5
CDS TCA 72 bp GACCCAAGCCTGGGGACCAGGACGGGATTGCCCAGTTaGCCTTCTAAGGCGCAGTGGGGAAGTCGAGGTGTG +
Preference number: 6 (lower is better)
Translates to: DPSLGTRTGLPS*PSKAQWGSRGV
Trigger: CACACCTCGACTTCCCCACTGCGCCTTAGAAGGTCAACTGGGCAATCCCGTCCTGGTCCCCAGGCTTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 72 bp GTCTGCTCGATGAGCTCCCTGGTGCGCTCCTCTATCTaGTGGGCACTCAGGTCCCACCGCAGGTCGTTTACC +
Preference number: 6 (lower is better)
Translates to: VCSMSSLVRSSI*WALRSHRRSFT
Trigger: GGTAAACGACCTGCGGTGGGACCTGAGTGCCCAGCAGATAGAGGAGCGCACCAGGGAGCTCATCGAGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS GCA 72 bp TGGCGCTGGCATCCTCGGAACCGCCGGGTCTCAGGATaGAGCTTCTGTAATCCATGCCAACCTGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: WRWHPRNRRVSG*SFCNPCQPAGC
Trigger: GCAGCCTGCAGGTTGGCATGGATTACAGAAGCTGCATCCTGAGACCCGGCGGTTCCGAGGATGCCAGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 72 bp GTCCCACCGCAGGTCGTTTACCACAGAGCACGGAGATaGTGCGTCCGCCATGTCTCCTGCACAGGGCCTGTA +
Preference number: 6 (lower is better)
Translates to: VPPQVVYHRARR*CVRHVSCTGPV
Trigger: TACAGGCCCTGTGCAGGAGACATGGCGGACGCAGCATCTCCGTGCTCTGTGGTAAACGACCTGCGGTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585338.1
CDS GCA 72 bp GCCACTAGGACCCAAGCCTGGGGACCAGGACGGGATTaGCCAGTTGACCTTCTAAGGCGCAGTGGGGAAGTC +
Preference number: 6 (lower is better)
Translates to: ATRTQAWGPGRD*PVDLLRRSGEV
Trigger: GACTTCCCCACTGCGCCTTAGAAGGTCAACTGGGCAATCCCGTCCTGGTCCCCAGGCTTGGGTCCTAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CCA 72 bp GGAACCATGGCAGGCAGCCAACGGCGAGGGAACTCCTaGGTGATCCTCAAGGTCCTCTCTGCAACACCGAGG +
Preference number: 6 (lower is better)
Translates to: GTMAGSQRRGNS*VILKVLSATPR
Trigger: CCTCGGTGTTGCAGAGAGGACCTTGAGGATCACCCAGGAGTTCCCTCGCCGTTGGCTGCCTGCCATGGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CCA 72 bp CTGAGGCCGATCACGCAGATCCCGGAAGGACTCGTATaGGAAGACACGGAGCTCCCAGCACTCACAGCCCGA +
Preference number: 6 (lower is better)
Translates to: LRPITQIPEGLV*EDTELPALTAR
Trigger: TCGGGCTGTGAGTGCTGGGAGCTCCGTGTCTTCCCATACGAGTCCTTCCGGGATCTGCGTGATCGGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587401.5
CDS CCA 72 bp TGGCCTGGCCCTCACTCTGCCACTAGGACCCAAGCCTaGGGACCAGGACGGGATTGCCCAGTTGACCTTCTA +
Preference number: 6 (lower is better)
Translates to: WPGPHSATRTQA*GPGRDCPVDLL
Trigger: TAGAAGGTCAACTGGGCAATCCCGTCCTGGTCCCCAGGCTTGGGTCCTAGTGGCAGAGTGAGGGCCAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CAA 90 bp CTCCCTGCTCGTGTGTGTGTGGAACCTTCCCTAAAAGCACAGCCCTaGACTGAGTCCCGCTGGAACCATGGCAGGCAGCCAACGGCGAGG +
Preference number: 6 (lower is better)
Translates to: LPARVCVEPSLKAQP*TESRWNHGRQPTAR
Trigger: CCTCGCCGTTGGCTGCCTGCCATGGTTCCAGCGGGACTCAGTCAAGGGCTGTGCTTTTAGGGAAGGTTCCACACACACACGAGCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000592639.1
CDS CAA 90 bp CGAGGGCATCACTGCTGCATGTGGGGACACCTCCATGTCCAGGCCTaGGTTCCCAGTCTCACGGGCTCTGCCTATCGCCACCAGCAAATG +
Preference number: 6 (lower is better)
Translates to: RGHHCCMWGHLHVQA*VPSLTGSAYRHQQM
Trigger: CATTTGCTGGTGGCGATAGGCAGAGCCCGTGAGACTGGGAACCAAGGCCTGGACATGGAGGTGTCCCCACATGCAGCAGTGATGCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS TCA 72 bp TGCCAACCTGGTCATACACGCGCTTGGTCTGCTCGATaGGCTCCCTGGTGCGCTCCTCTATCTGCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: CQPGHTRAWSAR*APWCAPLSAGH
Trigger: GTGCCCAGCAGATAGAGGAGCGCACCAGGGAGCTCATCGAGCAGACCAAGCGCGTGTATGACCAGGTTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS TCA 72 bp GAAAGTCCTCGGGGAGCCCTCCTAGCTCCTGGAGCGTaGAGGGCAGGAAGGTCGTGTCCTCGTTCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: ESPRGALLAPGA*RAGRSCPRSGS
Trigger: AGAACCTGAACGAGGACACGACCTTCCTGCCCTTCACGCTCCAGGAGCTAGGAGGGCTCCCCGAGGACTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307741.11
ENST00000586677.5
CDS GCA 72 bp TCCTGGGTGCCAACCTGGTCATACACGCGCTTGGTCTaGTCGATGAGCTCCCTGGTGCGCTCCTCTATCTGC +
Preference number: 6 (lower is better)
Translates to: SWVPTWSYTRLV*SMSSLVRSSIC
Trigger: GCAGATAGAGGAGCGCACCAGGGAGCTCATCGAGCAGACCAAGCGCGTGTATGACCAGGTTGGCACCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS GCA 72 bp CCACAGGTACCCGTAGTACTGGGCGTCGTAGCCACCTaGCAGATGGCCGAAGGTTGCAGGCATGTTGGTTCC +
Preference number: 6 (lower is better)
Translates to: PQVPVVLGVVAT*QMAEGCRHVGS
Trigger: GGAACCAACATGCCTGCAACCTTCGGCCATCTGGCAGGTGGCTACGACGCCCAGTACTACGGGTACCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
CDS GCA 72 bp CCACCGCAGGTCGTTTACCACAGAGCACGGAGATGCTaGGTCCGCCATGTCTCCTGCACAGGGCCTGTAATC +
Preference number: 6 (lower is better)
Translates to: PPQVVYHRARRC*VRHVSCTGPVI
Trigger: GATTACAGGCCCTGTGCAGGAGACATGGCGGACGCAGCATCTCCGTGCTCTGTGGTAAACGACCTGCGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585338.1
CDS CCA 72 bp CCTTCCCTAAAAGCACAGCCCTTGACTGAGTCCCGCTaGAACCATGGCAGGCAGCCAACGGCGAGGGAACTC +
Preference number: 6 (lower is better)
Translates to: PSLKAQPLTESR*NHGRQPTAREL
Trigger: GAGTTCCCTCGCCGTTGGCTGCCTGCCATGGTTCCAGCGGGACTCAGTCAAGGGCTGTGCTTTTAGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000592639.1
CDS CCA 72 bp TCTGAGGACTGGCACTGCCAACCAAGCCAGTGGGGGTaGGGGAGGACGCATGAAAGCCACGTGAGGCGTTTA +
Preference number: 6 (lower is better)
Translates to: SEDWHCQPSQWG*GRTHESHVRRL
Trigger: TAAACGCCTCACGTGGCTTTCATGCGTCCTCCCCCACCCCCACTGGCTTGGTTGGCAGTGCCAGTCCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CAA 72 bp GGCTTTTCTGTTCCAAGGACCACGCAGCCACACTCCTaGTCCCGACGGAATGCACCAAGGGACTCGCCGTGC +
Preference number: 6 (lower is better)
Translates to: GFSVPRTTQPHS*SRRNAPRDSPC
Trigger: GCACGGCGAGTCCCTTGGTGCATTCCGTCGGGACAAGGAGTGTGGCTGCGTGGTCCTTGGAACAGAAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CAA 72 bp TCTGAGGTTCTAAACCTCCCTCTCAGCAGAGGTGGCTaGGCGCAGGGCAGCATGAAAACCACGGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: SEVLNLPLSRGG*AQGSMKTTARP
Trigger: GGGCCTGGCCGTGGTTTTCATGCTGCCCTGCGCCAAGCCACCTCTGCTGAGAGGGAGGTTTAGAACCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CAA 90 bp GACACGTCCTCAAACTCCTGGGTGCCAACCTGGTCATACACGCGCTaGGTCTGCTCGATGAGCTCCCTGGTGCGCTCCTCTATCTGCTGG +
Preference number: 6 (lower is better)
Translates to: DTSSNSWVPTWSYTR*VCSMSSLVRSSICW
Trigger: CCAGCAGATAGAGGAGCGCACCAGGGAGCTCATCGAGCAGACCAAGCGCGTGTATGACCAGGTTGGCACCCAGGAGTTTGAGGACGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS TCA 72 bp GTGTGTGGAACCTTCCCTAAAAGCACAGCCCTTGACTaGGTCCCGCTGGAACCATGGCAGGCAGCCAACGGC +
Preference number: 6 (lower is better)
Translates to: VCGTFPKSTALD*VPLEPWQAANG
Trigger: GCCGTTGGCTGCCTGCCATGGTTCCAGCGGGACTCAGTCAAGGGCTGTGCTTTTAGGGAAGGTTCCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000592639.1
CDS TCA 72 bp CGCCACCAGCAAATGACATGCACACAGCCTCACTTCTaGGGACTGGCACTGCCAACCAAGCCAGTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: RHQQMTCTQPHF*GLALPTKPVGV
Trigger: CACCCCCACTGGCTTGGTTGGCAGTGCCAGTCCTCAGAAGTGAGGCTGTGTGCATGTCATTTGCTGGTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 72 bp GCGTGCTCTCGTAGGACACGTCCTCAAACTCCTGGGTaGCAACCTGGTCATACACGCGCTTGGTCTGCTCGA +
Preference number: 6 (lower is better)
Translates to: ACSRRTRPQTPG*QPGHTRAWSAR
Trigger: TCGAGCAGACCAAGCGCGTGTATGACCAGGTTGGCACCCAGGAGTTTGAGGACGTGTCCTACGAGAGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS GCA 72 bp CCGGGTGGGGACGCTGTGAGGCATGCTGCATCTCCCTaGTCGTGTGTGTGTGGAACCTTCCCTAAAAGCACA +
Preference number: 6 (lower is better)
Translates to: PGGDAVRHAASP*SCVCGTFPKST
Trigger: TGTGCTTTTAGGGAAGGTTCCACACACACACGAGCAGGGAGATGCAGCATGCCTCACAGCGTCCCCACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395212.8
ENST00000592639.1
CDS GCA 72 bp CCATGTCCAGGCCTTGGTTCCCAGTCTCACGGGCTCTaGCTATCGCCACCAGCAAATGACATGCACACAGCC +
Preference number: 6 (lower is better)
Translates to: PCPGLGSQSHGL*LSPPANDMHTA
Trigger: GGCTGTGTGCATGTCATTTGCTGGTGGCGATAGGCAGAGCCCGTGAGACTGGGAACCAAGGCCTGGACATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CCA 72 bp GCTCATCTAGGAAGGTGGCCACGGTCTGGCTGGTCTTaGCCATGTTCATCTCCAGGACATAGTCGGCGTGCG +
Preference number: 6 (lower is better)
Translates to: AHLGRWPRSGWS*PCSSPGHSRRA
Trigger: CGCACGCCGACTATGTCCTGGAGATGAACATGGCCAAGACCAGCCAGACCGTGGCCACCTTCCTAGATGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000591149.5
CDS CCA 72 bp GCGCCAGCTCATCTAGGAAGGTGGCCACGGTCTGGCTaGTCTTGGCCATGTTCATCTCCAGGACATAGTCGG +
Preference number: 6 (lower is better)
Translates to: APAHLGRWPRSG*SWPCSSPGHSR
Trigger: CCGACTATGTCCTGGAGATGAACATGGCCAAGACCAGCCAGACCGTGGCCACCTTCCTAGATGAGCTGGCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000589087.5
ENST00000591149.5
CDS CCA 72 bp ACGCGTGTGCTGGCTACGAGTGCTGTGCAAACAGTGTaGCAGGGAAGCCAGGAAAGGTGGACACACGGTCGA +
Preference number: 6 (lower is better)
Translates to: TRVLATSAVQTV*QGSQERWTHGR
Trigger: TCGACCGTGTGTCCACCTTTCCTGGCTTCCCTGCCACACTGTTTGCACAGCACTCGTAGCCAGCACACGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CAA 72 bp TCAAACTCCTGGGTGCCAACCTGGTCATACACGCGCTaGGTCTGCTCGATGAGCTCCCTGGTGCGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SNSWVPTWSYTR*VCSMSSLVRSS
Trigger: AGAGGAGCGCACCAGGGAGCTCATCGAGCAGACCAAGCGCGTGTATGACCAGGTTGGCACCCAGGAGTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS CAA 90 bp ACGTCCTCCCTCATGCTCATCTCCACGTCGAACTCAGAGAGCTTCTaGTCGGCCTCTGTGCTGGCTGTCCGGATGTCCTTGGAGGGGGAA +
Preference number: 6 (lower is better)
Translates to: TSSLMLISTSNSESF*SASVLAVRMSLEGE
Trigger: TTCCCCCTCCAAGGACATCCGGACAGCCAGCACAGAGGCCGACAAGAAGCTCTCTGAGTTCGACGTGGAGATGAGCATGAGGGAGGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS TCA 72 bp CCAGTCTCACGGGCTCTGCCTATCGCCACCAGCAAATaGCATGCACACAGCCTCACTTCTGAGGACTGGCAC +
Preference number: 6 (lower is better)
Translates to: PVSRALPIATSK*HAHSLTSEDWH
Trigger: GTGCCAGTCCTCAGAAGTGAGGCTGTGTGCATGTCATTTGCTGGTGGCGATAGGCAGAGCCCGTGAGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 72 bp CCACGTCGAACTCAGAGAGCTTCTTGTCGGCCTCTGTaGTGGCTGTCCGGATGTCCTTGGAGGGGGAAACAT +
Preference number: 6 (lower is better)
Translates to: PRRTQRASCRPL*WLSGCPWRGKH
Trigger: ATGTTTCCCCCTCCAAGGACATCCGGACAGCCAGCACAGAGGCCGACAAGAAGCTCTCTGAGTTCGACGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS GCA 72 bp TGGCGCTGGCATCCTCGGAACCGCCGGGTCTCAGGATaGAGCTTCTGTAATCCATGCCAACCTTGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: WRWHPRNRRVSG*SFCNPCQPCCS
Trigger: TGAACAGCAAGGTTGGCATGGATTACAGAAGCTGCATCCTGAGACCCGGCGGTTCCGAGGATGCCAGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307741.11
ENST00000586677.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS GCA 72 bp GCGAGGGAACTCCTGGGTGATCCTCAAGGTCCTCTCTaGAACACCGAGGCTTTTCTGTTCCAAGGACCACGC +
Preference number: 6 (lower is better)
Translates to: ARELLGDPQGPL*NTEAFLFQGPR
Trigger: GCGTGGTCCTTGGAACAGAAAAGCCTCGGTGTTGCAGAGAGGACCTTGAGGATCACCCAGGAGTTCCCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS GCA 72 bp AAGGCTCATATCCAGCTCCGTCTGACCTCCGGTCCCTaGCCCTCTCGGCCTGTGTTACTACACAACTCCTCT +
Preference number: 6 (lower is better)
Translates to: KAHIQLRLTSGP*PSRPVLLHNSS
Trigger: AGAGGAGTTGTGTAGTAACACAGGCCGAGAGGGGCAGGGACCGGAGGTCAGACGGAGCTGGATATGAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CCA 72 bp CGTCGAACTCAGAGAGCTTCTTGTCGGCCTCTGTGCTaGCTGTCCGGATGTCCTTGGAGGGGGAAACATGCT +
Preference number: 6 (lower is better)
Translates to: RRTQRASCRPLC*LSGCPWRGKHA
Trigger: AGCATGTTTCCCCCTCCAAGGACATCCGGACAGCCAGCACAGAGGCCGACAAGAAGCTCTCTGAGTTCGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS CCA 72 bp GCTGTGCAAACAGTGTGGCAGGGAAGCCAGGAAAGGTaGACACACGGTCGATCCTCATTCCTGGACTCCGTG +
Preference number: 6 (lower is better)
Translates to: AVQTVWQGSQER*THGRSSFLDSV
Trigger: CACGGAGTCCAGGAATGAGGATCGACCGTGTGTCCACCTTTCCTGGCTTCCCTGCCACACTGTTTGCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CAA 72 bp TTCTTGTCGGCCTCTGTGCTGGCTGTCCGGATGTCCTaGGAGGGGGAAACATGCTGTGTAGGTGACCTCCAC +
Preference number: 6 (lower is better)
Translates to: FLSASVLAVRMS*EGETCCVGDLH
Trigger: GTGGAGGTCACCTACACAGCATGTTTCCCCCTCCAAGGACATCCGGACAGCCAGCACAGAGGCCGACAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586780.1
CDS GCA 72 bp GTTGACCTTCTAAGGCGCAGTGGGGAAGTCGAGGTGTaGCCAGTCCACGGGTCCACCTACTTAGGCTTAACA +
Preference number: 6 (lower is better)
Translates to: VDLLRRSGEVEV*PVHGSTYLGLT
Trigger: TGTTAAGCCTAAGTAGGTGGACCCGTGGACTGGGCACACCTCGACTTCCCCACTGCGCCTTAGAAGGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CAA 72 bp CTCATGCTCATCTCCACGTCGAACTCAGAGAGCTTCTaGTCGGCCTCTGTGCTGGCTGTCCGGATGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LMLISTSNSESF*SASVLAVRMSL
Trigger: CAAGGACATCCGGACAGCCAGCACAGAGGCCGACAAGAAGCTCTCTGAGTTCGACGTGGAGATGAGCATGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
ENST00000586780.1
CDS GCA 72 bp GGAGCCACACGATCCTCTGGTACACGTCCTCCCTCATaGTCATCTCCACGTCGAACTCAGAGAGCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: GATRSSGTRPPS*SSPRRTQRASC
Trigger: ACAAGAAGCTCTCTGAGTTCGACGTGGAGATGAGCATGAGGGAGGACGTGTACCAGAGGATCGTGTGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000585338.1
ENST00000585673.5
CDS CCA 72 bp TTGCTGTTCAGGACACCCTCCTGCTTGAAGCGCGTGTaGAACATGTCCATGGAATACACCTCGCTCCACAGG +
Preference number: 6 (lower is better)
Translates to: LLFRTPSCLKRV*NMSMEYTSLHR
Trigger: CCTGTGGAGCGAGGTGTATTCCATGGACATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCCTGAACAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307741.11
ENST00000395212.8
ENST00000586677.5
ENST00000587401.5
ENST00000587468.1
ENST00000589087.5
ENST00000590970.5
CDS CCA 72 bp CTGCCCCTCTCGGCCTGTGTTACTACACAACTCCTCTaGTCATGCCACCAGCGTTATCATAATCCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: LPLSACVTTQLL*SCHQRYHNPKA
Trigger: GGCCTTGGGATTATGATAACGCTGGTGGCATGACCAGAGGAGTTGTGTAGTAACACAGGCCGAGAGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS GCA 72 bp CAGTGTGGAGCTTCCTTGCTGTTCAGGACACCCTCCTaGTTGAAGCGCGTGTGGAACATGTCCATGGAATAC +
Preference number: 6 (lower is better)
Translates to: QCGASLLFRTPS*LKRVWNMSMEY
Trigger: GTATTCCATGGACATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCCTGAACAGCAAGGAAGCTCCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587401.5
CDS CAA 90 bp TCCTGGAGCGTGAAGGGCAGGAAGGTCGTGTCCTCGTTCAGGTTCTaGTTGAAGTCGATGCACAGAAGGCTCAGCTTCTTCTTGATGCGT +
Preference number: 6 (lower is better)
Translates to: SWSVKGRKVVSSFRF*LKSMHRRLSFFLMR
Trigger: ACGCATCAAGAAGAAGCTGAGCCTTCTGTGCATCGACTTCAACAAGAACCTGAACGAGGACACGACCTTCCTGCCCTTCACGCTCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000585673.5
ENST00000586677.5
CDS TCA 72 bp GTCCACGGGTCCACCTACTTAGGCTTAACAGCAACATaGATTCATAGCCAACATGTAGAGGGCAGGCCACGC +
Preference number: 6 (lower is better)
Translates to: VHGSTYLGLTAT*IHSQHVEGRPR
Trigger: GCGTGGCCTGCCCTCTACATGTTGGCTATGAATTCATGTTGCTGTTAAGCCTAAGTAGGTGGACCCGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS CAA 72 bp GTGAAGGGCAGGAAGGTCGTGTCCTCGTTCAGGTTCTaGTTGAAGTCGATGCACAGAAGGCTCAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: VKGRKVVSSFRF*LKSMHRRLSFF
Trigger: GAAGAAGCTGAGCCTTCTGTGCATCGACTTCAACAAGAACCTGAACGAGGACACGACCTTCCTGCCCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000585673.5
ENST00000586677.5
CDS CAA 90 bp TGGAGCGTGAAGGGCAGGAAGGTCGTGTCCTCGTTCAGGTTCTTGTaGAAGTCGATGCACAGAAGGCTCAGCTTCTTCTTGATGCGTTTG +
Preference number: 6 (lower is better)
Translates to: WSVKGRKVVSSFRFL*KSMHRRLSFFLMRL
Trigger: CAAACGCATCAAGAAGAAGCTGAGCCTTCTGTGCATCGACTTCAACAAGAACCTGAACGAGGACACGACCTTCCTGCCCTTCACGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000585673.5
ENST00000586677.5
CDS CAA 90 bp CTCCTCTGGTCATGCCACCAGCGTTATCATAATCCCAAGGCCTTTTaGGAACCAGAAGGGGTGCAGATGACTCTAAGGCCTCACACGGAA +
Preference number: 6 (lower is better)
Translates to: LLWSCHQRYHNPKAF*EPEGVQMTLRPHTE
Trigger: TTCCGTGTGAGGCCTTAGAGTCATCTGCACCCCTTCTGGTTCCAAAAAGGCCTTGGGATTATGATAACGCTGGTGGCATGACCAGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589087.5
CDS TCA 72 bp AGTGAGGAAACTTGCTGTTCAGGACACCCTCCTGCTTaGAGCGCGTGTGGAACATGTCCATGGAATACACCT +
Preference number: 6 (lower is better)
Translates to: SEETCCSGHPPA*SACGTCPWNTP
Trigger: AGGTGTATTCCATGGACATGTTCCACACGCGCTTCAAGCAGGAGGGTGTCCTGAACAGCAAGTTTCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395212.8
CDS CAA 72 bp AAGGGCAGGAAGGTCGTGTCCTCGTTCAGGTTCTTGTaGAAGTCGATGCACAGAAGGCTCAGCTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: KGRKVVSSFRFL*KSMHRRLSFFL
Trigger: CAAGAAGAAGCTGAGCCTTCTGTGCATCGACTTCAACAAGAACCTGAACGAGGACACGACCTTCCTGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307741.11
ENST00000585673.5
ENST00000586677.5
CDS GCA 72 bp CTCTCGGCCTGTGTTACTACACAACTCCTCTGGTCATaGCACCAGCGTTATCATAATCCCAAGGCCTTTTTG +
Preference number: 6 (lower is better)
Translates to: LSACVTTQLLWS*HQRYHNPKAFL
Trigger: CAAAAAGGCCTTGGGATTATGATAACGCTGGTGGCATGACCAGAGGAGTTGTGTAGTAACACAGGCCGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589087.5