RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THOC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000079134

Ensembl transcript IDs: ENST00000261600.11, ENST00000577429.5, ENST00000578224.5, ENST00000578529.5, ENST00000579232.5, ENST00000579891.5, ENST00000580038.5, ENST00000580544.1, ENST00000580870.5, ENST00000581116.1, ENST00000581269.5, ENST00000582313.5, ENST00000583228.5, ENST00000584470.5, ENST00000584642.1, ENST00000616322.4, ENST00000631280.2

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTCCAAGTAGGGAGCCAGAATCTTCCATTGTTCACCCAGCTTGTTaGCAAATACCTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCC +
Preference number: 1 (lower is better)
Translates to: FPSREPESSIVHPAC*QIPLFVLLLQVCLA
Trigger: GGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGGAAGATTCTGGCTCCCTACTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CCA 90 bp CCTTATATTCATTTTCCACCATATTTTCAGGGTCTGCCTGTTCAATaGCTTCTTCAAAGAATTCCTCCAAAGTGGGCATGTGTTCCCTTG +
Preference number: 1 (lower is better)
Translates to: PYIHFPPYFQGLPVQ*LLQRIPPKWACVPL
Trigger: CAAGGGAACACATGCCCACTTTGGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGAAAATGAATATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR GCA 90 bp ATTGTTCACAGCCTTATATTCATTTTCCACCATATTTTCAGGGTCTaGCTGTTCAATGGCTTCTTCAAAGAATTCCTCCAAAGTGGGCAT +
Preference number: 1 (lower is better)
Translates to: IVHSLIFIFHHIFRV*LFNGFFKEFLQSGH
Trigger: ATGCCCACTTTGGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGAAAATGAATATAAGGCTGTGAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR TCA 90 bp AATCTTCTCATAGCATTGCACAGGGTTCCTGAAGTAATCCTGAAGTaGCCAGAATTTTCGATACAGGTTGTAATCAATTGGAATAGAGCA +
Preference number: 1 (lower is better)
Translates to: NLLIALHRVPEVILK*PEFSIQVVINWNRA
Trigger: TGCTCTATTCCAATTGATTACAACCTGTATCGAAAATTCTGGTCACTTCAGGATTACTTCAGGAACCCTGTGCAATGCTATGAGAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR TCA 90 bp GTTGGCAAATACCTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCGTTGGCTGGAAGAAGTaGGGGCTTCTCCGTGCTAAT +
Preference number: 2 (lower is better)
Translates to: VGKYLYLFSCYRFVSPNIVGWKK*GLLRAN
Trigger: ATTAGCACGGAGAAGCCCTCACTTCTTCCAGCCAAC...GATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATTTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CAA 90 bp TGCATTAATCAGATTCTCAGGTGTTGCATGAACTCCCTCTTGATCTaGCCAGGCAACCAGGAGCTGCTTAGCTCTCATCTTCATGTCTTC +
Preference number: 2 (lower is better)
Translates to: CINQILRCCMNSLLI*PGNQELLSSHLHVF
Trigger: GAAGACATGAAGATGAGAGCTAAGCAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGATTAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR TCA 90 bp TCCCTCTTGATCTTGCCAGGCAACCAGGAGCTGCTTAGCTCTCATCTTCATGTCGAAGTAATCCTGAAGTaGCCAGAATTTTCGATACAG +
Preference number: 2 (lower is better)
Translates to: SLLILPGNQELLSSHLHVEVILK*PEFSIQ
Trigger: CTGTATCGAAAATTCTGGTCACTTCAGGATTACTTC...GACATGAAGATGAGAGCTAAGCAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR GCA 90 bp TTGGCTGGAAGAAGTGAGGGCTTCTCCGTGCTAATAGTCTCAGGGCTCTCCAACAATAAAATGAGATACTaGAACAGGATGTGTCGACGA +
Preference number: 2 (lower is better)
Translates to: LAGRSEGFSVLIVSGLSNNKMRY*NRMCRR
Trigger: TCGTCGACACATCCTGTTGCAGTATCTCATTTTATT...GTTGGAGAGCCCTGAGACTATTAGCACGGAGAAGCCCTCACTTCTTCCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CCA 90 bp TCCACCATATTTTCAGGGTCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTCCAAACTGCTGGTTGGTTaGCTGGAAGAAGTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: STIFSGSACSMASSKNSSKLLVG*LEEVRA
Trigger: AGCCCTCACTTCTTCCAGCCAACCAACCAGCAGTTT...GGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CAA 90 bp ATTCAGTGCATTAATCAGATTCTCAGGTGTTGCATGAACTCCCTCTaGATCTTGCCAGGCAACCAGGAGCTGCTTAGCTCTCATCTTCAT +
Preference number: 2 (lower is better)
Translates to: IQCINQILRCCMNSL*ILPGNQELLSSHLH
Trigger: ATGAAGATGAGAGCTAAGCAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGATTAATGCACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CAA 90 bp CAGAATCTTCCATTGTTCACCCAGCTTGTTGGCAAATACCTCTATTaGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTC +
Preference number: 2 (lower is better)
Translates to: QNLPLFTQLVGKYLY*FSCYRFVSPNIRTF
Trigger: GAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGGAAGATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR TCA 90 bp TCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTTCAAGATATTCTTCAGTGTGCTTCTaGCCCAGGGTGCTTTCCTGC +
Preference number: 2 (lower is better)
Translates to: SEGGGNSLASFITIFSRYSSVCF*PRVLSC
Trigger: GCAGGAAAGCACCCTGGGTCAGAAGCACACTGAAGA...ATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR TCA 90 bp TTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTCATTTTCCTTATTGCACAGGGTTCCTaGAGTAATCCTGAAGTGACC +
Preference number: 2 (lower is better)
Translates to: LFSCYRFVSPNIRTFIFLIAQGS*SNPEVT
Trigger: GGTCACTTCAGGATTACTTCAGGAACCCTGTGCAAT...AAGGAAAATGAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR CCA 90 bp TCAATTGGAATAGAGCACGTTGTTGGAGCTTCCTCGTCTCCCATTTCGCCTTCTTGCCCCTTGAGATATTaGAATAAAATGAGATACTGC +
Preference number: 2 (lower is better)
Translates to: SIGIEHVVGASSSPISPSCPLRY*NKMRYC
Trigger: GCAGTATCTCATTTTATTCCAATATCTCAAGGGGCA...AGAAGGCGAAATGGGAGACGAGGAAGCTCCAACAACGTGCTCTATTCCAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR GCA 90 bp CTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTCATTCATATTTTCAGGGTCTaGCTGTTCAATGGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: LYLFSCYRFVSPNIRTFIHIFRV*LFNGFF
Trigger: GAAGAAGCCATTGAACAGGCAGACCCTGAAAATATG...AATGAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CCA 90 bp TCCTCGGGTGCTGTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTGATGTTGTTTACCAAAACCAGTaGACCTCTTATCAAATGCTG +
Preference number: 2 (lower is better)
Translates to: SSGAVLFRIILVGLVSDVVYQNQ*TSYQML
Trigger: CAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC...AACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAACAGCACCCGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CCA 90 bp TCCAGACTTATTCAGTGCATTAATCAGATTCTCAGGTGTTGCATGAACTCCCTCAAACTTTTAAACTGCTaGTTGGTTGGCTGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: SRLIQCINQILRCCMNSLKLLNC*LVGWKK
Trigger: CTTCTTCCAGCCAACCAACCAGCAGTTTAAAAGTTT...GAGGGAGTTCATGCAACACCTGAGAATCTGATTAATGCACTGAATAAGTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR TCA 90 bp CTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTCATTTTTTCCAGATTAAACTaGCTCTGCAAGTTAAGACCT +
Preference number: 2 (lower is better)
Translates to: LYLFSCYRFVSPNIRTFIFSRLN*LCKLRP
Trigger: AGGTCTTAACTTGCAGAGTCAGTTTAATCTGGAAAA...AATGAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR CCA 90 bp TCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTTCAAGATATAGAATTCCTCCAAAGTaGGCATGTGTTCCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: SEGGGNSLASFITIFSRYRIPPK*ACVPLS
Trigger: AGACAAGGGAACACATGCCCACTTTGGAGGAATTCT...ATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CCA 90 bp TTACAGGCTTCCATATTATCAGGGCAAAGATTCCAAAGCCTTGTTAACTCCTCAGAGGCGGTAATTCCTTaGCTAGCTTTATTACCATAT +
Preference number: 2 (lower is better)
Translates to: LQASILSGQRFQSLVNSSEAVIP*LALLPY
Trigger: ATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTC...TGAGGAGTTAACAAGGCTTTGGAATCTTTGCCCTGATAATATGGAAGCCTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR TCA 90 bp ATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTTCACAAAACTTGGGCAACTGCAAGTTAAGACCTaGTTTCTCAGACAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: IILVGLVSDVLSFTKLGQLQVKT*FLRQRE
Trigger: TTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAG...TTGCCCAAGTTTTGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR TCA 90 bp CAAAAAGAGCTGAATCCGTCCACAGAAGACTGTATTCTGGGATTTAGACAATCTTTTTCCAGATTAAACTaGCTCTGCAAGTTAAGACCT +
Preference number: 2 (lower is better)
Translates to: QKELNPSTEDCILGFRQSFSRLN*LCKLRP
Trigger: AGGTCTTAACTTGCAGAGTCAGTTTAATCTGGAAAA...AGATTGTCTAAATCCCAGAATACAGTCTTCTGTGGACGGATTCAGCTCTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000581269.5
ENST00000631280.2
3UTR-3UTR GCA 90 bp TGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAATCCATCAGCTTTTCACTTGGGACCTCTTATCAAATaGTGCTTGGTAACAAAATCT +
Preference number: 2 (lower is better)
Translates to: CVDESYCHSVVNPSAFHLGPLIK*CLVTKS
Trigger: AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCC...CAAGTGAAAAGCTGATGGATTTACAACTGAGTGACAGTAACTTTCGTCGACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR GCA 90 bp GGTGCTGTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTGGACCTCTTATCAAATaGTGCTTGGTAACAAAATCT +
Preference number: 2 (lower is better)
Translates to: GAVLFRIILVGLVSDVLSGPLIK*CLVTKS
Trigger: AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCC...AGAAAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAACAGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CCA 90 bp TATTCATTTTCCACCATATTTTCAGGGTCTGCCTGTTCAATGGCTTCTTCAAAGGTTTACCAAAACCAGTaGACCTCTTATCAAATGCTG +
Preference number: 2 (lower is better)
Translates to: YSFSTIFSGSACSMASSKVYQNQ*TSYQML
Trigger: CAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC...CTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGAAAATGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CCA 90 bp CTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTCATTTTCTTTCACAAAACTTaGGCAACCTTCATTTTTCCA +
Preference number: 2 (lower is better)
Translates to: LYLFSCYRFVSPNIRTFIFFHKT*ATFIFP
Trigger: TGGAAAAATGAAGGTTGCCCAAGTTTTGTGAAAGAA...AATGAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR GCA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTCATATTTTCAGGGTCTaGCTGTTCAATGGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGHIFRV*LFNGFF
Trigger: GAAGAAGCCATTGAACAGGCAGACCCTGAAAATATG...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR GCA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTGGTAAACTTTTAAACTaGTGGTTGGTTGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGGKLLN*WLVGWK
Trigger: CTTCCAGCCAACCAACCAGCAGTTTAAAAGTTTACC...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR GCA 90 bp TTTATTTCTTCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTCCCAGGGTGCTTTCCTaGTCATTTGTATTGAAAACA +
Preference number: 2 (lower is better)
Translates to: FISSEGGGNSLASFITIFPRVLS*SFVLKT
Trigger: TGTTTTCAATACAAATGAGCAGGAAAGCACCCTGGG...AAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGAAGAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR TCA 90 bp GAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTTCAAGATATTCTCGTAGGTTTGGTATCTaGTGTTCTTTCTTTCACAAA +
Preference number: 2 (lower is better)
Translates to: EGGGNSLASFITIFSRYSRRFGI*CSFFHK
Trigger: TTTGTGAAAGAAAGAACATCAGATACCAAACCTACG...AGAATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR GCA 90 bp GTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTTCACACTTTTGAATTTGACCTaGCCCTTGAGATATTGGAAT +
Preference number: 2 (lower is better)
Translates to: VLFRIILVGLVSDVLSFTLLNLT*PLRYWN
Trigger: ATTCCAATATCTCAAGGGGCAGGTCAAATTCAAAAG...TGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR GCA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTGGACCTCTTATCAAATaGTGCTTGGTAACAAAATCT +
Preference number: 2 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGGPLIK*CLVTKS
Trigger: AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCC...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
3UTR GCA 72 bp ATCCAAAACATCTCCCAACAATACAAAAGGTGTAGATaGGGTACAAATACCCAGGCAGTCTGGCTCCACAGT +
Preference number: 3 (lower is better)
Translates to: IQNISQQYKRCR*GTNTQAVWLHS
Trigger: ACTGTGGAGCCAGACTGCCTGGGTATTTGTACCGCATCTACACCTTTTGTATTGTTGGGAGATGTTTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581116.1
3UTR GCA 72 bp AGACTTATTCAGTGCATTAATCAGATTCTCAGGTGTTaGATGAACTCCCTCTTGATCTTGCCAGGCAACCAG +
Preference number: 3 (lower is better)
Translates to: RLIQCINQILRC*MNSLLILPGNQ
Trigger: CTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGATTAATGCACTGAATAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CAA 90 bp TTATCAGGGCAAAGATTCCAAAGCCTTGTTAACTCCTCATTTCCCATCAGAATTGGAGGCGGTAATTCCTaGGCTAGCTTTATTACCATA +
Preference number: 3 (lower is better)
Translates to: LSGQRFQSLVNSSFPIRIGGGNS*ASFITI
Trigger: TATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCC...AATTCTGATGGGAAATGAGGAGTTAACAAGGCTTTGGAATCTTTGCCCTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CAA 90 bp CTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTCATTGGCAAATACCTCTATTaGTTCTCCTGTTACAGGTTT +
Preference number: 3 (lower is better)
Translates to: LYLFSCYRFVSPNIRTFIGKYLY*FSCYRF
Trigger: AAACCTGTAACAGGAGAACAAATAGAGGTATTTGCC...AATGAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CAA 90 bp TTTCCACCATATTTTCAGGGTCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTTGTTCACCCAGCTTGTaGGCAAATACCTCTATTTGT +
Preference number: 3 (lower is better)
Translates to: FPPYFQGLPVQWLLQRIPCSPSL*ANTSIC
Trigger: ACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACA...AGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CAA 90 bp TCCTCACCTGTTTTTATTTCTTCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTAATTTGACCTGCCCCTaGAGATATTGGAATAAAATG +
Preference number: 3 (lower is better)
Translates to: SSPVFISSEGGGNSLASFNLTCP*RYWNKM
Trigger: CATTTTATTCCAATATCTCAAGGGGCAGGTCAAATT...AAAGCTAGCCAAGGAATTACCGCCTCCTTCTGAAGAAATAAAAACAGGTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CAA 90 bp GAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTTCAAGATATTCTGGAGGCGGTAATTCCTaGGCTAGCTTTATTACCATA +
Preference number: 3 (lower is better)
Translates to: EGGGNSLASFITIFSRYSGGGNS*ASFITI
Trigger: TATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCC...AGAATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR TCA 72 bp ATAGCATTGCACAGGGTTCCTGAAGTAATCCTGAAGTaGCCAGAATTTTCGATACAGGTTGTAATCAATTGG +
Preference number: 3 (lower is better)
Translates to: IALHRVPEVILK*PEFSIQVVINW
Trigger: CCAATTGATTACAACCTGTATCGAAAATTCTGGTCACTTCAGGATTACTTCAGGAACCCTGTGCAATGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR CAA 90 bp TCTTCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTTCAAGAAAAGATTCCAAAGCCTaGTTAACTCCTCATTTCCCA +
Preference number: 3 (lower is better)
Translates to: SSEGGGNSLASFITIFSRKDSKA*LTPHFP
Trigger: TGGGAAATGAGGAGTTAACAAGGCTTTGGAATCTTT...TCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CAA 90 bp AGATATTGGAATAAAATGAGATACTGCAACAGGATGTGTCGACGAAAGTTACTGTTTGAACTTTTGAATTaGACCTGCCCCTTGAGATAT +
Preference number: 3 (lower is better)
Translates to: RYWNKMRYCNRMCRRKLLFELLN*TCPLRY
Trigger: ATATCTCAAGGGGCAGGTCAAATTCAAAAGTTCAAA...CAGTAACTTTCGTCGACACATCCTGTTGCAGTATCTCATTTTATTCCAATATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR-3UTR CAA 90 bp ATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTTCACAAAACTTGGGCAATCCTGCTCATTTGTATaGAAAACAGTGACATTTTCC +
Preference number: 3 (lower is better)
Translates to: IILVGLVSDVLSFTKLGQSCSFV*KTVTFS
Trigger: GGAAAATGTCACTGTTTTCAATACAAATGAGCAGGA...TTGCCCAAGTTTTGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000631280.2
3UTR-3UTR CAA 90 bp ATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTTCACAAAACTTGGGCAATTTGAACTTTTGAATTaGACCTGCCCCTTGAGATAT +
Preference number: 3 (lower is better)
Translates to: IILVGLVSDVLSFTKLGQFELLN*TCPLRY
Trigger: ATATCTCAAGGGGCAGGTCAAATTCAAAAGTTCAAA...TTGCCCAAGTTTTGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CCA 72 bp CTGTTTTTATTTCTTCAGAAGGAGGCGGTAATTCCTTaGCTAGCTTTATTACCATATTTTCAAGATATTCTG +
Preference number: 3 (lower is better)
Translates to: LFLFLQKEAVIP*LALLPYFQDIL
Trigger: CAGAATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGAAGAAATAAAAACAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TCCCAACAATACAAAAGGTGTAGATGCGGTACAAATACCCAGGCAGTCTGGCTCGCGCTTCGGGCAAACTaGAGAGCGGCGGCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: SQQYKRCRCGTNTQAVWLALRAN*RAAASE
Trigger: CTCCGACGCCGCCGCTCTTCAGTTTGCCCGAAGCGC...GAGCCAGACTGCCTGGGTATTTGTACCGCATCTACACCTTTTGTATTGTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS-3UTR TCA 90 bp ATGAGATACTGCAACAGGATGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAAGCGCTTCGGGCAAACTaGAGAGCGGCGGCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: MRYCNRMCRRKLLSLSCKALRAN*RAAASE
Trigger: CTCCGACGCCGCCGCTCTTCAGTTTGCCCGAAGCGC...TTTACAACTGAGTGACAGTAACTTTCGTCGACACATCCTGTTGCAGTATCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp CAAAAAGAGCTGAATCCGTCCACAGAAGACTGTATTCTGGGATTTAGACAATCTGCGCTTCGGGCAAACTaGAGAGCGGCGGCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: QKELNPSTEDCILGFRQSALRAN*RAAASE
Trigger: CTCCGACGCCGCCGCTCTTCAGTTTGCCCGAAGCGC...AGATTGTCTAAATCCCAGAATACAGTCTTCTGTGGACGGATTCAGCTCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581116.1
ENST00000581269.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TCAGATTCTCAGGTGTTGCATGAACTCCCTCTTGATCTTGCCAGGCAACCAGGATCTTCAGTGTGCTTCTaGCCCAGGGTGCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SDSQVLHELPLDLARQPGSSVCF*PRVLSC
Trigger: GCAGGAAAGCACCCTGGGTCAGAAGCACACTGAAGA...TCCTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACGCGCTTCGGGCAAACTaGAGAGCGGCGGCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHALRAN*RAAASE
Trigger: CTCCGACGCCGCCGCTCTTCAGTTTGCCCGAAGCGC...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp CAAAAAGAGCTGAATCCGTCCACAGAAGACTGTATTCTGGGATTTAGACAATCTAGACATCTTCTCGGCTaGGCGTGCCCGCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: QKELNPSTEDCILGFRQSRHLLG*ACPPLR
Trigger: GCGCAGTGGCGGGCACGCGCAGCCGAGAAGATGTCT...AGATTGTCTAAATCCCAGAATACAGTCTTCTGTGGACGGATTCAGCTCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581269.5
CDS-3UTR CCA 90 bp TTGGCTGGAAGAAGTGAGGGCTTCTCCGTGCTAATAGTCTCAGGGCTCTCCAACAATAGAGCACGTTGTTaGAGCTTCCTCGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LAGRSEGFSVLIVSGLSNNRARC*SFLVSH
Trigger: ATGGGAGACGAGGAAGCTCCAACAACGTGCTCTATT...GTTGGAGAGCCCTGAGACTATTAGCACGGAGAAGCCCTCACTTCTTCCAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631280.2
CDS-3UTR TCA 90 bp ATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACGCGCTTCGGGCAAACTaGAGAGCGGCGGCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: MFIVYQNQWTSYQMLLGNALRAN*RAAASE
Trigger: CTCCGACGCCGCCGCTCTTCAGTTTGCCCGAAGCGC...GTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp TTGGCTGGAAGAAGTGAGGGCTTCTCCGTGCTAATAGTCTCAGGGCTCTCCAACCTTCTAGAATACCTCTaGAAGCTTGGTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LAGRSEGFSVLIVSGLSNLLEYL*KLGQGY
Trigger: GTACCCTTGACCAAGCTTTCAGAGGTATTCTAGAAG...GTTGGAGAGCCCTGAGACTATTAGCACGGAGAAGCCCTCACTTCTTCCAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CAA 72 bp CAGATTCTCAGGTGTTGCATGAACTCCCTCTTGATCTaGCCAGGCAACCAGGAGCTGCTTAGCTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: QILRCCMNSLLI*PGNQELLSSHL
Trigger: AAGATGAGAGCTAAGCAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCAACACCTGAGAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp CCTTTCCCTAGGAAGTCCTCGGGTGCTGTTCTCTTCCGAATTATTCTCGTAGGTGCTTCTGACCCAGGGTaGTTTCCTGCTCATTTGTAT +
Preference number: 4 (lower is better)
Translates to: PFPRKSSGAVLFRIILVGASDPG*FPAHLY
Trigger: ATACAAATGAGCAGGAAAGCACCCTGGGTCAGAAGC...ACCTACGAGAATAATTCGGAAGAGAACAGCACCCGAGGACTTCCTAGGGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp GAATCTTCCATTGTTCACCCAGCTTGTTGGCAAATACCTCTATTTGTTCTCCTGTCTTCAGTGTGCTTCTaGCCCAGGGTGCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ESSIVHPACWQIPLFVLLSSVCF*PRVLSC
Trigger: GCAGGAAAGCACCCTGGGTCAGAAGCACACTGAAGA...CAGGAGAACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGGAAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TCCTCGGGTGCTGTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTGATGTTGTTGGCTGGAAGAAGTaGGGGCTTCTCCGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: SSGAVLFRIILVGLVSDVVGWKK*GLLRAN
Trigger: ATTAGCACGGAGAAGCCCTCACTTCTTCCAGCCAAC...AACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAACAGCACCCGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp AAAGGTGTAGATGCGGTACAAATACCCAGGCAGTCTGGCTCCACAGTCTGTTTTCTTCTAGAATACCTCTaGAAGCTTGGTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: KGVDAVQIPRQSGSTVCFLLEYL*KLGQGY
Trigger: GTACCCTTGACCAAGCTTTCAGAGGTATTCTAGAAG...AAAACAGACTGTGGAGCCAGACTGCCTGGGTATTTGTACCGCATCTACACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS-3UTR TCA 90 bp TTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTCATTTTCCTTGTTGGCTGGAAGAAGTaGGGGCTTCTCCGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: LFSCYRFVSPNIRTFIFLVGWKK*GLLRAN
Trigger: ATTAGCACGGAGAAGCCCTCACTTCTTCCAGCCAAC...AAGGAAAATGAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CAA 72 bp ATTAATCAGATTCTCAGGTGTTGCATGAACTCCCTCTaGATCTTGCCAGGCAACCAGGAGCTGCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: INQILRCCMNSL*ILPGNQELLSS
Trigger: AGAGCTAAGCAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTCCAAAGTGGGCATGTGTTCCCTTCTAGAATACCTCTaGAAGCTTGGTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: SACSMASSKNSSKVGMCSLLEYL*KLGQGY
Trigger: GTACCCTTGACCAAGCTTTCAGAGGTATTCTAGAAG...GGAACACATGCCCACTTTGGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTCCAAAGTGGGCATGTGTTCCCTGCAAGTTAAGACCTaGTTTCTCAGACAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SACSMASSKNSSKVGMCSLQVKT*FLRQRE
Trigger: TTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAG...GGAACACATGCCCACTTTGGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp CTCTGCAAGTTAAGACCTGATTTCTCAGACAGAGGGAAAAGCCTGGCCAAAAAGCTGCAAGTTAAGACCTaGTTTCTCAGACAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LCKLRPDFSDRGKSLAKKLQVKT*FLRQRE
Trigger: TTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAG...CTTTTTGGCCAGGCTTTTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581269.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACTCTTCAGTGTGCTTCTaGCCCAGGGTGCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHSSVCF*PRVLSC
Trigger: GCAGGAAAGCACCCTGGGTCAGAAGCACACTGAAGA...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp GTTGGCAAATACCTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCATTGCACAGGGTTCCTaGAGTAATCCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VGKYLYLFSCYRFVSPNIIAQGS*SNPRCW
Trigger: CCAACAACGTGGATTACTTCAGGAACCCTGTGCAAT...GATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATTTGCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580038.5
CDS-3UTR CCA 90 bp CTCTGCAAGTTAAGACCTGATTTCTCAGACAGAGGGAAAAGCCTGGCCAAAAAGTCACTGCCAGGTACCTaGCTGAAGGTACTTAACAAT +
Preference number: 4 (lower is better)
Translates to: LCKLRPDFSDRGKSLAKKSLPGT*LKVLNN
Trigger: ATTGTTAAGTACCTTCAGCCAGGTACCTGGCAGTGA...CTTTTTGGCCAGGCTTTTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581269.5
ENST00000631280.2
CDS-3UTR CCA 90 bp TCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTCCAAAGTGGGCATGTGTTCCAGAATTCCTCCAAAGTaGGCATGTGTTCCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SACSMASSKNSSKVGMCSRIPPK*ACVPLS
Trigger: AGACAAGGGAACACATGCCCACTTTGGAGGAATTCT...GGAACACATGCCCACTTTGGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp AACATCTCCCAACAATACAAAAGGTGTAGATGCGGTACAAATACCCAGGCAGTCAATACCCAGGCAGTCTaGCTCCACAGTCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NISQQYKRCRCGTNTQAVNTQAV*LHSLFS
Trigger: AGAAAACAGACTGTGGAGCCAGACTGCCTGGGTATT...GACTGCCTGGGTATTTGTACCGCATCTACACCTTTTGTATTGTTGGGAGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581116.1
3UTR CAA 72 bp CCATTGTTCACCCAGCTTGTTGGCAAATACCTCTATTaGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATC +
Preference number: 4 (lower is better)
Translates to: PLFTQLVGKYLY*FSCYRFVSPNI
Trigger: GATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTTCTTCAGTGTGCTTCTaGCCCAGGGTGCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSSSVCF*PRVLSC
Trigger: GCAGGAAAGCACCCTGGGTCAGAAGCACACTGAAGA...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp CTCTGCAAGTTAAGACCTGATTTCTCAGACAGAGGGAAAAGCCTGGCCAAAAAGAATATTGTGTCACACTaGTCCAAAGGAAGACAATCC +
Preference number: 4 (lower is better)
Translates to: LCKLRPDFSDRGKSLAKKNIVSH*SKGRQS
Trigger: GGATTGTCTTCCTTTGGATCAGTGTGACACAATATT...CTTTTTGGCCAGGCTTTTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581269.5
ENST00000631280.2
CDS-3UTR GCA 90 bp TGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAATCCATCAGCTTTTCACTTGGCTTCTGACCCAGGGTaGTTTCCTGCTCATTTGTAT +
Preference number: 4 (lower is better)
Translates to: CVDESYCHSVVNPSAFHLASDPG*FPAHLY
Trigger: ATACAAATGAGCAGGAAAGCACCCTGGGTCAGAAGC...CAAGTGAAAAGCTGATGGATTTACAACTGAGTGACAGTAACTTTCGTCGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp CTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTCCAAAGTGGGCATGTGTTCCCCTTTTGAATTTGACCTaGCCCTTGAGATATTGGAAT +
Preference number: 4 (lower is better)
Translates to: LPVQWLLQRIPPKWACVPLLNLT*PLRYWN
Trigger: ATTCCAATATCTCAAGGGGCAGGTCAAATTCAAAAG...GGGAACACATGCCCACTTTGGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp AATACCTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTCACTGCCAGGTACCTaGCTGAAGGTACTTAACAAT +
Preference number: 4 (lower is better)
Translates to: NTSICSPVTGLSRRTSGLSLPGT*LKVLNN
Trigger: ATTGTTAAGTACCTTCAGCCAGGTACCTGGCAGTGA...AAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp TCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTCCAAAGTGGGCATGTGTTCCGTTCACCCAGCTTGTTaGCAAATACCTCTATTTGTT +
Preference number: 4 (lower is better)
Translates to: SACSMASSKNSSKVGMCSVHPAC*QIPLFV
Trigger: AACAAATAGAGGTATTTGCCAACAAGCTGGGTGAAC...GGAACACATGCCCACTTTGGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CAA 72 bp GTCTTTCATTTCCAAGTAGGGAGCCAGAATCTTCCATaGTTCACCCAGCTTGTTGGCAAATACCTCTATTTG +
Preference number: 4 (lower is better)
Translates to: VFHFQVGSQNLP*FTQLVGKYLYL
Trigger: CAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGGAAGATTCTGGCTCCCTACTTGGAAATGAAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp CAAAAAGAGCTGAATCCGTCCACAGAAGACTGTATTCTGGGATTTAGACAATCTCTTCTAGAATACCTCTaGAAGCTTGGTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: QKELNPSTEDCILGFRQSLLEYL*KLGQGY
Trigger: GTACCCTTGACCAAGCTTTCAGAGGTATTCTAGAAG...AGATTGTCTAAATCCCAGAATACAGTCTTCTGTGGACGGATTCAGCTCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581116.1
ENST00000581269.5
ENST00000631280.2
CDS-3UTR TCA 90 bp CTCTGCAAGTTAAGACCTGATTTCTCAGACAGAGGGAAAAGCCTGGCCAAAAAGTTTTCCAGATTAAACTaGCTCTGCAAGTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: LCKLRPDFSDRGKSLAKKFSRLN*LCKLRP
Trigger: AGGTCTTAACTTGCAGAGTCAGTTTAATCTGGAAAA...CTTTTTGGCCAGGCTTTTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000581269.5
ENST00000631280.2
CDS-3UTR TCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATGTTGGCTGGAAGAAGTaGGGGCTTCTCCGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNVGWKK*GLLRAN
Trigger: ATTAGCACGGAGAAGCCCTCACTTCTTCCAGCCAAC...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp GAATCTTCCATTGTTCACCCAGCTTGTTGGCAAATACCTCTATTTGTTCTCCTGCCCAGGGTGCTTTCCTaGTCATTTGTATTGAAAACA +
Preference number: 4 (lower is better)
Translates to: ESSIVHPACWQIPLFVLLPRVLS*SFVLKT
Trigger: TGTTTTCAATACAAATGAGCAGGAAAGCACCCTGGG...CAGGAGAACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGGAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp GCCTGTTCAATGGCTTCTTCAAAGAATTCCTCCAAAGTGGGCATGTGTTCCCTTCTTTTGAATTTGACCTaGCCCTTGAGATATTGGAAT +
Preference number: 4 (lower is better)
Translates to: ACSMASSKNSSKVGMCSLLLNLT*PLRYWN
Trigger: ATTCCAATATCTCAAGGGGCAGGTCAAATTCAAAAG...AAGGGAACACATGCCCACTTTGGAGGAATTCTTTGAAGAAGCCATTGAACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp TCCTCACCTGTTTTTATTTCTTCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTCATATTTTCAGGGTCTaGCTGTTCAATGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSPVFISSEGGGNSLASFHIFRV*LFNGFF
Trigger: GAAGAAGCCATTGAACAGGCAGACCCTGAAAATATG...AAAGCTAGCCAAGGAATTACCGCCTCCTTCTGAAGAAATAAAAACAGGTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp TCCAGACTTATTCAGTGCATTAATCAGATTCTCAGGTGTTGCATGAACTCCCTCGGTAAACTTTTAAACTaGTGGTTGGTTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SRLIQCINQILRCCMNSLGKLLN*WLVGWK
Trigger: CTTCCAGCCAACCAACCAGCAGTTTAAAAGTTTACC...GAGGGAGTTCATGCAACACCTGAGAATCTGATTAATGCACTGAATAAGTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp GAATCTTCCATTGTTCACCCAGCTTGTTGGCAAATACCTCTATTTGTTCTCCTGGGTAAACTTTTAAACTaGTGGTTGGTTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ESSIVHPACWQIPLFVLLGKLLN*WLVGWK
Trigger: CTTCCAGCCAACCAACCAGCAGTTTAAAAGTTTACC...CAGGAGAACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGGAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp TGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAATCCATCAGCTTTTCACTTGCAGATTCTCAGGTGTTaGATGAACTCCCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: CVDESYCHSVVNPSAFHLQILRC*MNSLLI
Trigger: GATCAAGAGGGAGTTCATGCAACACCTGAGAATCTG...CAAGTGAAAAGCTGATGGATTTACAACTGAGTGACAGTAACTTTCGTCGACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAATAGAGCACGTTGTTaGAGCTTCCTCGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHNRARC*SFLVSH
Trigger: ATGGGAGACGAGGAAGCTCCAACAACGTGCTCTATT...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CTTCCATATTATCAGGGCAAAGATTCCAAAGCCTTGTTAACTCCTCATTTCCCAAGAATTCCTCCAAAGTaGGCATGTGTTCCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LPYYQGKDSKALLTPHFPRIPPK*ACVPLS
Trigger: AGACAAGGGAACACATGCCCACTTTGGAGGAATTCT...TGGGAAATGAGGAGTTAACAAGGCTTTGGAATCTTTGCCCTGATAATATGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp TCCAGACTTATTCAGTGCATTAATCAGATTCTCAGGTGTTGCATGAACTCCCTCGGTCTGCCTGTTCAATaGCTTCTTCAAAGAATTCCT +
Preference number: 4 (lower is better)
Translates to: SRLIQCINQILRCCMNSLGLPVQ*LLQRIP
Trigger: AGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACC...GAGGGAGTTCATGCAACACCTGAGAATCTGATTAATGCACTGAATAAGTCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CAA 72 bp TCGGGTGCTGTTCTCTTCCGAATTATTCTCGTAGGTTaGGTATCTGATGTTCTTTCTTTCACAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: SGAVLFRIILVG*VSDVLSFTKLG
Trigger: CCCAAGTTTTGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAACAGCACCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
3UTR CAA 72 bp TTGGCAAATACCTCTATTTGTTCTCCTGTTACAGGTTaGTCTCGCCGAACATCAGGACTTTCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LANTSICSPVTG*SRRTSGLSFSF
Trigger: GAAGGAAAATGAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATTTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TCCAAAACATCTCCCAACAATACAAAAGGTGTAGATGCGGTACAAATACCCAGGAATATTGTGTCACACTaGTCCAAAGGAAGACAATCC +
Preference number: 4 (lower is better)
Translates to: SKTSPNNTKGVDAVQIPRNIVSH*SKGRQS
Trigger: GGATTGTCTTCCTTTGGATCAGTGTGACACAATATT...CCTGGGTATTTGTACCGCATCTACACCTTTTGTATTGTTGGGAGATGTTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS-3UTR TCA 90 bp CAAAAAGAGCTGAATCCGTCCACAGAAGACTGTATTCTGGGATTTAGACAATCTGTGTTCCCTTGTCTCTaGTTTACAGGCTTCCATATT +
Preference number: 4 (lower is better)
Translates to: QKELNPSTEDCILGFRQSVFPCL*FTGFHI
Trigger: AATATGGAAGCCTGTAAATCAGAGACAAGGGAACAC...AGATTGTCTAAATCCCAGAATACAGTCTTCTGTGGACGGATTCAGCTCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631280.2
CDS-3UTR GCA 90 bp AACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTGCTTCTGACCCAGGGTaGTTTCCTGCTCATTTGTAT +
Preference number: 4 (lower is better)
Translates to: NQWTSYQMLLGNKIYHSFASDPG*FPAHLY
Trigger: ATACAAATGAGCAGGAAAGCACCCTGGGTCAGAAGC...AAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACCAGATTCTCAGGTGTTaGATGAACTCCCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHQILRC*MNSLLI
Trigger: GATCAAGAGGGAGTTCATGCAACACCTGAGAATCTG...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp TTTCCACCATATTTTCAGGGTCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTGGTCTGCCTGTTCAATaGCTTCTTCAAAGAATTCCT +
Preference number: 4 (lower is better)
Translates to: FPPYFQGLPVQWLLQRIPGLPVQ*LLQRIP
Trigger: AGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACC...AGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATAAACTGCTGGTTGGTTaGCTGGAAGAAGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNKLLVG*LEEVRA
Trigger: AGCCCTCACTTCTTCCAGCCAACCAACCAGCAGTTT...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAAAACTGCTGGTTGGTTaGCTGGAAGAAGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVKLLVG*LEEVRA
Trigger: AGCCCTCACTTCTTCCAGCCAACCAACCAGCAGTTT...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAAAACTGCTGGTTGGTTaGCTGGAAGAAGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKKLLVG*LEEVRA
Trigger: AGCCCTCACTTCTTCCAGCCAACCAACCAGCAGTTT...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp ATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTTCACAAAACTTGGGCAAAAACTGCTGGTTGGTTaGCTGGAAGAAGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IILVGLVSDVLSFTKLGQKLLVG*LEEVRA
Trigger: AGCCCTCACTTCTTCCAGCCAACCAACCAGCAGTTT...TTGCCCAAGTTTTGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp GAATCTTCCATTGTTCACCCAGCTTGTTGGCAAATACCTCTATTTGTTCTCCTGGTTTACCAAAACCAGTaGACCTCTTATCAAATGCTG +
Preference number: 4 (lower is better)
Translates to: ESSIVHPACWQIPLFVLLVYQNQ*TSYQML
Trigger: CAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC...CAGGAGAACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGGAAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp ATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCCTTCTAGAATACCTCTaGAAGCTTGGTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: IVYQNQWTSYQMLLGNKILLEYL*KLGQGY
Trigger: GTACCCTTGACCAAGCTTTCAGAGGTATTCTAGAAG...GATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp GTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTTCACACTGCAAGTTAAGACCTaGTTTCTCAGACAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VLFRIILVGLVSDVLSFTLQVKT*FLRQRE
Trigger: TTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAG...TGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TTTCCACCATATTTTCAGGGTCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTGAAGTAATCCTGAAGTaGCCAGAATTTTCGATACAG +
Preference number: 4 (lower is better)
Translates to: FPPYFQGLPVQWLLQRIPEVILK*PEFSIQ
Trigger: CTGTATCGAAAATTCTGGTCACTTCAGGATTACTTC...AGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631280.2
CDS-3UTR TCA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATTGCACAGGGTTCCTaGAGTAATCCTGAAGTGACC +
Preference number: 4 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKIAQGS*SNPEVT
Trigger: GGTCACTTCAGGATTACTTCAGGAACCCTGTGCAAT...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp ACCTTTGAAACCAAATTAGTCCTACTTCTGAAAGGAAGAAATGGGACTTTCAAAATTGCACAGGGTTCCTaGAGTAATCCTGAAGTGACC +
Preference number: 4 (lower is better)
Translates to: TFETKLVLLLKGRNGTFKIAQGS*SNPEVT
Trigger: GGTCACTTCAGGATTACTTCAGGAACCCTGTGCAAT...TTTGAAAGTCCCATTTCTTCCTTTCAGAAGTAGGACTAATTTGGTTTCAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584642.1
CDS-3UTR TCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATATTGCACAGGGTTCCTaGAGTAATCCTGAAGTGACC +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNIAQGS*SNPEVT
Trigger: GGTCACTTCAGGATTACTTCAGGAACCCTGTGCAAT...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp TCCAGACTTATTCAGTGCATTAATCAGATTCTCAGGTGTTGCATGAACTCCCTCTACAAAAGGTGTAGATaGGGTACAAATACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SRLIQCINQILRCCMNSLYKRCR*GTNTFS
Trigger: ACTGAAGGTATTTGTACCGCATCTACACCTTTTGTA...GAGGGAGTTCATGCAACACCTGAGAATCTGATTAATGCACTGAATAAGTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580038.5
CDS-3UTR GCA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAGCTTCTGACCCAGGGTaGTTTCCTGCTCATTTGTAT +
Preference number: 4 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKASDPG*FPAHLY
Trigger: ATACAAATGAGCAGGAAAGCACCCTGGGTCAGAAGC...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACCATATTTTCAGGGTCTaGCTGTTCAATGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHHIFRV*LFNGFF
Trigger: GAAGAAGCCATTGAACAGGCAGACCCTGAAAATATG...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp ACAATCTTCTTAGGAGATCATTGCACATACGTAGTAAGTAATTTTTCCCAGCAGTCACTGCCAGGTACCTaGCTGAAGGTACTTAACAAT +
Preference number: 4 (lower is better)
Translates to: TIFLGDHCTYVVSNFSQQSLPGT*LKVLNN
Trigger: ATTGTTAAGTACCTTCAGCCAGGTACCTGGCAGTGA...CTGCTGGGAAAAATTACTTACTACGTATGTGCAATGATCTCCTAAGAAGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS-3UTR CCA 90 bp ATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACTCACTGCCAGGTACCTaGCTGAAGGTACTTAACAAT +
Preference number: 4 (lower is better)
Translates to: MFIVYQNQWTSYQMLLGNSLPGT*LKVLNN
Trigger: ATTGTTAAGTACCTTCAGCCAGGTACCTGGCAGTGA...GTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp GTTGGCAAATACCTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCCAGAAGACTGTATTCTaGGATTTAGACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: VGKYLYLFSCYRFVSPNIQKTVF*DLDNLL
Trigger: AAGAAGATTGTCTAAATCCCAGAATACAGTCTTCTG...GATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATTTGCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp ACCTTTGAAACCAAATTAGTCCTACTTCTGAAAGGAAGAAATGGGACTTTCAAAAATAGAGCACGTTGTTaGAGCTTCCTCGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: TFETKLVLLLKGRNGTFKNRARC*SFLVSH
Trigger: ATGGGAGACGAGGAAGCTCCAACAACGTGCTCTATT...TTTGAAAGTCCCATTTCTTCCTTTCAGAAGTAGGACTAATTTGGTTTCAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584642.1
CDS-3UTR CCA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAAATAGAGCACGTTGTTaGAGCTTCCTCGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVNRARC*SFLVSH
Trigger: ATGGGAGACGAGGAAGCTCCAACAACGTGCTCTATT...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTCATTTGCCCCTTGAGATATTaGAATAAAATGAGATACTGC +
Preference number: 4 (lower is better)
Translates to: LYLFSCYRFVSPNIRTFICPLRY*NKMRYC
Trigger: GCAGTATCTCATTTTATTCCAATATCTCAAGGGGCA...AATGAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp GTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATAGAATTCCTCCAAAGTaGGCATGTGTTCCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VYQNQWTSYQMLLGNKIYRIPPK*ACVPLS
Trigger: AGACAAGGGAACACATGCCCACTTTGGAGGAATTCT...ATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CCTGTTTTTATTTCTTCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCAAACTTTTAAACTGCTaGTTGGTTGGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PVFISSEGGGNSLASFITKLLNC*LVGWKK
Trigger: CTTCTTCCAGCCAACCAACCAGCAGTTTAAAAGTTT...GGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGAAGAAATAAAAACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp GGTGCTGTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTGAGGCGGTAATTCCTTaGCTAGCTTTATTACCATAT +
Preference number: 4 (lower is better)
Translates to: GAVLFRIILVGLVSDVLSEAVIP*LALLPY
Trigger: ATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTC...AGAAAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAACAGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp TTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAAAGTAATCCACGTTGTTaGAGCTTCCTCGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLFTKTSGPLIKCCLVTKSNPRC*SFLVSH
Trigger: ATGGGAGACGAGGAAGCTCCAACAACGTGGATTACT...TTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580038.5
CDS-3UTR TCA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTACTTCTAGAATACCTCTaGAAGCTTGGTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVLLEYL*KLGQGY
Trigger: GTACCCTTGACCAAGCTTTCAGAGGTATTCTAGAAG...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAATATTGTGTCACACTaGTCCAAAGGAAGACAATCC +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHNIVSH*SKGRQS
Trigger: GGATTGTCTTCCTTTGGATCAGTGTGACACAATATT...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATCTGCAAGTTAAGACCTaGTTTCTCAGACAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNLQVKT*FLRQRE
Trigger: TTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAG...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAACTGCAAGTTAAGACCTaGTTTCTCAGACAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKLQVKT*FLRQRE
Trigger: TTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAG...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp TGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAATCCATCAGCTTTTCACTTGTTTTCCAGATTAAACTaGCTCTGCAAGTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: CVDESYCHSVVNPSAFHLFSRLN*LCKLRP
Trigger: AGGTCTTAACTTGCAGAGTCAGTTTAATCTGGAAAA...CAAGTGAAAAGCTGATGGATTTACAACTGAGTGACAGTAACTTTCGTCGACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp AGACTTTCTGCAAGGTCACTTAATCCAGACTTATTCAGTGCATTAATCAGATTCGTGTTCCCTTGTCTCTaGTTTACAGGCTTCCATATT +
Preference number: 4 (lower is better)
Translates to: RLSARSLNPDLFSALIRFVFPCL*FTGFHI
Trigger: AATATGGAAGCCTGTAAATCAGAGACAAGGGAACAC...GAATCTGATTAATGCACTGAATAAGTCTGGATTAAGTGACCTTGCAGAAAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp AACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTCCCAGGGTGCTTTCCTaGTCATTTGTATTGAAAACA +
Preference number: 4 (lower is better)
Translates to: NQWTSYQMLLGNKIYHSFPRVLS*SFVLKT
Trigger: TGTTTTCAATACAAATGAGCAGGAAAGCACCCTGGG...AAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp GTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTTCACACATATTTTCAGGGTCTaGCTGTTCAATGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLFRIILVGLVSDVLSFTHIFRV*LFNGFF
Trigger: GAAGAAGCCATTGAACAGGCAGACCCTGAAAATATG...TGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTGGTAAACTTTTAAACTaGTGGTTGGTTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSGKLLN*WLVGWK
Trigger: CTTCCAGCCAACCAACCAGCAGTTTAAAAGTTTACC...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATCAGATTCTCAGGTGTTaGATGAACTCCCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNQILRC*MNSLLI
Trigger: GATCAAGAGGGAGTTCATGCAACACCTGAGAATCTG...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp GGTGCTGTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTCCAGACTTATTCAGTaGATTAATCAGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GAVLFRIILVGLVSDVLSSRLIQ*INQILR
Trigger: CCTGAGAATCTGATTAATGCACTGAATAAGTCTGGA...AGAAAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAACAGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp ACAATCTTCTTAGGAGATCATTGCACATACGTAGTAAGTAATTTTTCCCAGCAGTACAAAAGGTGTAGATaGGGTACAAATACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TIFLGDHCTYVVSNFSQQYKRCR*GTNTQA
Trigger: TGCCTGGGTATTTGTACCGCATCTACACCTTTTGTA...CTGCTGGGAAAAATTACTTACTACGTATGTGCAATGATCTCCTAAGAAGATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS-3UTR CCA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTATCACTGCCAGGTACCTaGCTGAAGGTACTTAACAAT +
Preference number: 4 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVSLPGT*LKVLNN
Trigger: ATTGTTAAGTACCTTCAGCCAGGTACCTGGCAGTGA...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp GAATCTTCCATTGTTCACCCAGCTTGTTGGCAAATACCTCTATTTGTTCTCCTGCAGAAGACTGTATTCTaGGATTTAGACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: ESSIVHPACWQIPLFVLLQKTVF*DLDNLL
Trigger: AAGAAGATTGTCTAAATCCCAGAATACAGTCTTCTG...CAGGAGAACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGGAAGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACCAGGTTGTAATCAATTaGAATAGAGCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHQVVIN*NRARCW
Trigger: CCAACAACGTGCTCTATTCCAATTGATTACAACCTG...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CAAAAAGAGCTGAATCCGTCCACAGAAGACTGTATTCTGGGATTTAGACAATCTTGCCCCTTGAGATATTaGAATAAAATGAGATACTGC +
Preference number: 4 (lower is better)
Translates to: QKELNPSTEDCILGFRQSCPLRY*NKMRYC
Trigger: GCAGTATCTCATTTTATTCCAATATCTCAAGGGGCA...AGATTGTCTAAATCCCAGAATACAGTCTTCTGTGGACGGATTCAGCTCTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000631280.2
CDS-3UTR CCA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAAGAATTCCTCCAAAGTaGGCATGTGTTCCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVRIPPK*ACVPLS
Trigger: AGACAAGGGAACACATGCCCACTTTGGAGGAATTCT...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACGAGGCGGTAATTCCTTaGCTAGCTTTATTACCATAT +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHEAVIP*LALLPY
Trigger: ATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTC...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTAATATTGTGTCACACTaGTCCAAAGGAAGACAATCC +
Preference number: 4 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSNIVSH*SKGRQS
Trigger: GGATTGTCTTCCTTTGGATCAGTGTGACACAATATT...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACTTTTCCAGATTAAACTaGCTCTGCAAGTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHFSRLN*LCKLRP
Trigger: AGGTCTTAACTTGCAGAGTCAGTTTAATCTGGAAAA...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp ATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCGAAGTAATCCTGAAGTaGCCAGAATTTTCGATACAG +
Preference number: 4 (lower is better)
Translates to: IVYQNQWTSYQMLLGNKIEVILK*PEFSIQ
Trigger: CTGTATCGAAAATTCTGGTCACTTCAGGATTACTTC...GATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp TTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAAGTGTTCCCTTGTCTCTaGTTTACAGGCTTCCATATT +
Preference number: 4 (lower is better)
Translates to: LLFTKTSGPLIKCCLVTKVFPCL*FTGFHI
Trigger: AATATGGAAGCCTGTAAATCAGAGACAAGGGAACAC...TTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAGTGTTCCCTTGTCTCTaGTTTACAGGCTTCCATATT +
Preference number: 4 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVVFPCL*FTGFHI
Trigger: AATATGGAAGCCTGTAAATCAGAGACAAGGGAACAC...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACTACAAAAGGTGTAGATaGGGTACAAATACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHYKRCR*GTNTFS
Trigger: ACTGAAGGTATTTGTACCGCATCTACACCTTTTGTA...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
CDS-3UTR GCA 90 bp TTATCAGGGCAAAGATTCCAAAGCCTTGTTAACTCCTCATTTCCCATCAGAATTAATAAAATGAGATACTaGAACAGGATGTGTCGACGA +
Preference number: 4 (lower is better)
Translates to: LSGQRFQSLVNSSFPIRINKMRY*NRMCRR
Trigger: TCGTCGACACATCCTGTTGCAGTATCTCATTTTATT...AATTCTGATGGGAAATGAGGAGTTAACAAGGCTTTGGAATCTTTGCCCTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp TATTCATTTTCCACCATATTTTCAGGGTCTGCCTGTTCAATGGCTTCTTCAAAGAATAAAATGAGATACTaGAACAGGATGTGTCGACGA +
Preference number: 4 (lower is better)
Translates to: YSFSTIFSGSACSMASSKNKMRY*NRMCRR
Trigger: TCGTCGACACATCCTGTTGCAGTATCTCATTTTATT...CTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGAAAATGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACCTTTTGAATTTGACCTaGCCCTTGAGATATTGGAAT +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHLLNLT*PLRYWN
Trigger: ATTCCAATATCTCAAGGGGCAGGTCAAATTCAAAAG...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAACATATTTTCAGGGTCTaGCTGTTCAATGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKHIFRV*LFNGFF
Trigger: GAAGAAGCCATTGAACAGGCAGACCCTGAAAATATG...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACGGACCTCTTATCAAATaGTGCTTGGTAACAAAATCT +
Preference number: 4 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHGPLIK*CLVTKS
Trigger: AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCC...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CAAAAAGAGCTGAATCCGTCCACAGAAGACTGTATTCTGGGATTTAGACAATCTCAGAAGACTGTATTCTaGGATTTAGACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: QKELNPSTEDCILGFRQSQKTVF*DLDNLL
Trigger: AAGAAGATTGTCTAAATCCCAGAATACAGTCTTCTG...AGATTGTCTAAATCCCAGAATACAGTCTTCTGTGGACGGATTCAGCTCTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581116.1
ENST00000581269.5
ENST00000631280.2
CDS-3UTR CCA 90 bp ATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCCAGGTTGTAATCAATTaGAATAGAGCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: IVYQNQWTSYQMLLGNKIQVVIN*NRARCW
Trigger: CCAACAACGTGCTCTATTCCAATTGATTACAACCTG...GATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp ATGAGATACTGCAACAGGATGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAATTCTTTCACAAAACTTaGGCAACCTTCATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: MRYCNRMCRRKLLSLSCKFFHKT*ATFIFP
Trigger: TGGAAAAATGAAGGTTGCCCAAGTTTTGTGAAAGAA...TTTACAACTGAGTGACAGTAACTTTCGTCGACACATCCTGTTGCAGTATCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATGGTCTGCCTGTTCAATaGCTTCTTCAAAGAATTCCT +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNGLPVQ*LLQRIP
Trigger: AGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACC...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp ATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCAAACTTTTAAACTGCTaGTTGGTTGGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: IVYQNQWTSYQMLLGNKIKLLNC*LVGWKK
Trigger: CTTCTTCCAGCCAACCAACCAGCAGTTTAAAAGTTT...GATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp ATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCGTTTACCAAAACCAGTaGACCTCTTATCAAATGCTG +
Preference number: 4 (lower is better)
Translates to: IVYQNQWTSYQMLLGNKIVYQNQ*TSYQML
Trigger: CAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC...GATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAATATTGTGTCACACTaGTCCAAAGGAAGACAATCC +
Preference number: 4 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGNIVSH*SKGRQS
Trigger: GGATTGTCTTCCTTTGGATCAGTGTGACACAATATT...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp ATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTTCACAAAACTTGGGCAAAATATTGTGTCACACTaGTCCAAAGGAAGACAATCC +
Preference number: 4 (lower is better)
Translates to: IILVGLVSDVLSFTKLGQNIVSH*SKGRQS
Trigger: GGATTGTCTTCCTTTGGATCAGTGTGACACAATATT...TTGCCCAAGTTTTGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTTCAAGATATTTTTCCAGATTAAACTaGCTCTGCAAGTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: SEGGGNSLASFITIFSRYFSRLN*LCKLRP
Trigger: AGGTCTTAACTTGCAGAGTCAGTTTAATCTGGAAAA...ATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp ACCTTTGAAACCAAATTAGTCCTACTTCTGAAAGGAAGAAATGGGACTTTCAAAGAAGTAATCCTGAAGTaGCCAGAATTTTCGATACAG +
Preference number: 4 (lower is better)
Translates to: TFETKLVLLLKGRNGTFKEVILK*PEFSIQ
Trigger: CTGTATCGAAAATTCTGGTCACTTCAGGATTACTTC...TTTGAAAGTCCCATTTCTTCCTTTCAGAAGTAGGACTAATTTGGTTTCAAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584642.1
CDS-3UTR TCA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTGAAGTAATCCTGAAGTaGCCAGAATTTTCGATACAG +
Preference number: 4 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGEVILK*PEFSIQ
Trigger: CTGTATCGAAAATTCTGGTCACTTCAGGATTACTTC...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTACGTAGGTTTGGTATCTaGTGTTCTGTCTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVRRFGI*CSVFHK
Trigger: TTTGTGAAAGACAGAACATCAGATACCAAACCTACG...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616322.4
CDS-3UTR GCA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTTACAAAAGGTGTAGATaGGGTACAAATACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSYKRCR*GTNTFS
Trigger: ACTGAAGGTATTTGTACCGCATCTACACCTTTTGTA...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
CDS-3UTR GCA 90 bp ATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAATAAAATGAGATACTaGAACAGGATGTGTCGACGA +
Preference number: 4 (lower is better)
Translates to: MFIVYQNQWTSYQMLLGNNKMRY*NRMCRR
Trigger: TCGTCGACACATCCTGTTGCAGTATCTCATTTTATT...GTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp ATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCAATAAAATGAGATACTaGAACAGGATGTGTCGACGA +
Preference number: 4 (lower is better)
Translates to: IVYQNQWTSYQMLLGNKINKMRY*NRMCRR
Trigger: TCGTCGACACATCCTGTTGCAGTATCTCATTTTATT...GATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp AACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTTCCAGACTTATTCAGTaGATTAATCAGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NQWTSYQMLLGNKIYHSFSRLIQ*INQILR
Trigger: CCTGAGAATCTGATTAATGCACTGAATAAGTCTGGA...AAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp GAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTTCAAGATATTCTTCCAGACTTATTCAGTaGATTAATCAGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: EGGGNSLASFITIFSRYSSRLIQ*INQILR
Trigger: CCTGAGAATCTGATTAATGCACTGAATAAGTCTGGA...AGAATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp GAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTTCAAGATATTCTGGACCTCTTATCAAATaGTGCTTGGTAACAAAATCT +
Preference number: 4 (lower is better)
Translates to: EGGGNSLASFITIFSRYSGPLIK*CLVTKS
Trigger: AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCC...AGAATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp AACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTGGACCTCTTATCAAATaGTGCTTGGTAACAAAATCT +
Preference number: 4 (lower is better)
Translates to: NQWTSYQMLLGNKIYHSFGPLIK*CLVTKS
Trigger: AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCC...AAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp GTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATGGACCTCTTATCAAATaGTGCTTGGTAACAAAATCT +
Preference number: 4 (lower is better)
Translates to: VYQNQWTSYQMLLGNKIYGPLIK*CLVTKS
Trigger: AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCC...ATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp ATCCAAAGGAAGACAATCCAAAACATCTCCCAACAATACAAAAGGTGTAGATGCCAGAAGACTGTATTCTaGGATTTAGACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: IQRKTIQNISQQYKRCRCQKTVF*DLDNLL
Trigger: AAGAAGATTGTCTAAATCCCAGAATACAGTCTTCTG...GCATCTACACCTTTTGTATTGTTGGGAGATGTTTTGGATTGTCTTCCTTTGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS-3UTR CCA 90 bp ACCTTTGAAACCAAATTAGTCCTACTTCTGAAAGGAAGAAATGGGACTTTCAAACAGGTTGTAATCAATTaGAATAGAGCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: TFETKLVLLLKGRNGTFKQVVIN*NRARCW
Trigger: CCAACAACGTGCTCTATTCCAATTGATTACAACCTG...TTTGAAAGTCCCATTTCTTCCTTTCAGAAGTAGGACTAATTTGGTTTCAAAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584642.1
CDS-3UTR CCA 90 bp TTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAACAGGTTGTAATCAATTaGAATAGAGCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLFTKTSGPLIKCCLVTKQVVIN*NRARCW
Trigger: CCAACAACGTGCTCTATTCCAATTGATTACAACCTG...TTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp ATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACTGCCCCTTGAGATATTaGAATAAAATGAGATACTGC +
Preference number: 4 (lower is better)
Translates to: MFIVYQNQWTSYQMLLGNCPLRY*NKMRYC
Trigger: GCAGTATCTCATTTTATTCCAATATCTCAAGGGGCA...GTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATAAACTTTTAAACTGCTaGTTGGTTGGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNKLLNC*LVGWKK
Trigger: CTTCTTCCAGCCAACCAACCAGCAGTTTAAAAGTTT...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAAAACTTTTAAACTGCTaGTTGGTTGGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVKLLNC*LVGWKK
Trigger: CTTCTTCCAGCCAACCAACCAGCAGTTTAAAAGTTT...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATGAGGCGGTAATTCCTTaGCTAGCTTTATTACCATAT +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNEAVIP*LALLPY
Trigger: ATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTC...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAGAGGCGGTAATTCCTTaGCTAGCTTTATTACCATAT +
Preference number: 4 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKEAVIP*LALLPY
Trigger: ATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTC...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAGTTCACCCAGCTTGTTaGCAAATACCTCTATTTGTT +
Preference number: 4 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKVHPAC*QIPLFV
Trigger: AACAAATAGAGGTATTTGCCAACAAGCTGGGTGAAC...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp TTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAAGTTCACCCAGCTTGTTaGCAAATACCTCTATTTGTT +
Preference number: 4 (lower is better)
Translates to: LLFTKTSGPLIKCCLVTKVHPAC*QIPLFV
Trigger: AACAAATAGAGGTATTTGCCAACAAGCTGGGTGAAC...TTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATGTTCACCCAGCTTGTTaGCAAATACCTCTATTTGTT +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNVHPAC*QIPLFV
Trigger: AACAAATAGAGGTATTTGCCAACAAGCTGGGTGAAC...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATGTTTACCAAAACCAGTaGACCTCTTATCAAATGCTG +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNVYQNQ*TSYQML
Trigger: CAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAGTTTACCAAAACCAGTaGACCTCTTATCAAATGCTG +
Preference number: 4 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKVYQNQ*TSYQML
Trigger: CAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp TTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATTTTCCAGATTAAACTaGCTCTGCAAGTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: LLFTKTSGPLIKCCLVTKFSRLN*LCKLRP
Trigger: AGGTCTTAACTTGCAGAGTCAGTTTAATCTGGAAAA...TTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR TCA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTACGTAGGTTTGGTATCTaGTGTTCTTTCTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVRRFGI*CSFFHK
Trigger: TTTGTGAAAGAAAGAACATCAGATACCAAACCTACG...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATCGTAGGTTTGGTATCTaGTGTTCTTTCTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNRRFGI*CSFFHK
Trigger: TTTGTGAAAGAAAGAACATCAGATACCAAACCTACG...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000631280.2
CDS-3UTR TCA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAACGTAGGTTTGGTATCTaGTGTTCTTTCTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKRRFGI*CSFFHK
Trigger: TTTGTGAAAGAAAGAACATCAGATACCAAACCTACG...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000631280.2
CDS-3UTR GCA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTCTTTTGAATTTGACCTaGCCCTTGAGATATTGGAAT +
Preference number: 4 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGLLNLT*PLRYWN
Trigger: ATTCCAATATCTCAAGGGGCAGGTCAAATTCAAAAG...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR GCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATTCCAGACTTATTCAGTaGATTAATCAGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNSRLIQ*INQILR
Trigger: CCTGAGAATCTGATTAATGCACTGAATAAGTCTGGA...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp GTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCAGAAGACTGTATTCTaGGATTTAGACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: VYQNQWTSYQMLLGNKIYQKTVF*DLDNLL
Trigger: AAGAAGATTGTCTAAATCCCAGAATACAGTCTTCTG...ATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTCAGAAGACTGTATTCTaGGATTTAGACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSQKTVF*DLDNLL
Trigger: AAGAAGATTGTCTAAATCCCAGAATACAGTCTTCTG...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp TTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATGCCCCTTGAGATATTaGAATAAAATGAGATACTGC +
Preference number: 4 (lower is better)
Translates to: LLFTKTSGPLIKCCLVTKCPLRY*NKMRYC
Trigger: GCAGTATCTCATTTTATTCCAATATCTCAAGGGGCA...TTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATGTCTTTCACAAAACTTaGGCAACCTTCATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNVFHKT*ATFIFP
Trigger: TGGAAAAATGAAGGTTGCCCAAGTTTTGTGAAAGAC...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616322.4
3UTR CAA 72 bp CCTGTTTTTATTTCTTCAGAAGGAGGCGGTAATTCCTaGGCTAGCTTTATTACCATATTTTCAAGATATTCT +
Preference number: 4 (lower is better)
Translates to: PVFISSEGGGNS*ASFITIFSRYS
Trigger: AGAATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGAAGAAATAAAAACAGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CCA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATTTCTTTCACAAAACTTaGGCAACCTTCATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNFFHKT*ATFIFP
Trigger: TGGAAAAATGAAGGTTGCCCAAGTTTTGTGAAAGAA...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp TCCCTCTTGATCTTGCCAGGCAACCAGGAGCTGCTTAGCTCTCATCTTCATGTCTGCATGAACTCCCTCTaGATCTTGCCAGGCAACCAG +
Preference number: 5 (lower is better)
Translates to: SLLILPGNQELLSSHLHVCMNSL*ILPGNQ
Trigger: CTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCA...GACATGAAGATGAGAGCTAAGCAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS TCA 90 bp TCAGGTAAGGATCCTAAGTGGGACTATCTTCACCTGCAGAAGGAGTaGACTTGGGAAGACCTCAGAGTTGGAAAGACTCCCCACCCCCAA +
Preference number: 5 (lower is better)
Translates to: SGKDPKWDYLHLQKE*TWEDLRVGKTPHPQ
Trigger: TTGGGGGTGGGGAGTCTTTCCAACTCTGAGGTCTTCCCAAGTTCACTCCTTCTGCAGGTGAAGATAGTCCCACTTAGGATCCTTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577429.5
CDS TCA 90 bp ATTCCAAGTACAGGGTGCCAGAACCTCACCCCTGAGAGCGTTAAATaGCAGTGTCAGGTAAGGATCCTAAGTGGGACTATCTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: IPSTGCQNLTPESVK*QCQVRILSGTIFTC
Trigger: GCAGGTGAAGATAGTCCCACTTAGGATCCTTACCTGACACTGTCATTTAACGCTCTCAGGGGTGAGGTTCTGGCACCCTGTACTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577429.5
CDS CCA 90 bp GTCCAGCAGGCCCAGGCTGCAGTTTTGCTCACTACTTGGCATTTCTaGTCCATGAAGATATTTATCTTGTTTCTGGAAGCCCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: VQQAQAAVLLTTWHF*SMKIFILFLEAQPC
Trigger: ACAAGGCTGGGCTTCCAGAAACAAGATAAATATCTTCATGGACCAGAAATGCCAAGTAGTGAGCAAAACTGCAGCCTGGGCCTGCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582313.5
CDS-3UTR CAA 90 bp TCAGATTCTCAGGTGTTGCATGAACTCCCTCTTGATCTTGCCAGGCAACCAGGATCAGATTCTCAGGTGTaGCATGAACTCCCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: SDSQVLHELPLDLARQPGSDSQV*HELPLD
Trigger: ATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGA...TCCTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS TCA 90 bp ACCTTTTGCGCCACTACAGGATGTATCACTGCTTATACAGGAAAGTaGGAGAGCCCACCTTCACCTCTAGTTCTTCCTAAGACCTCATGT +
Preference number: 5 (lower is better)
Translates to: TFCATTGCITAYTGK*ESPPSPLVLPKTSC
Trigger: ACATGAGGTCTTAGGAAGAACTAGAGGTGAAGGTGGGCTCTCTCACTTTCCTGTATAAGCAGTGATACATCCTGTAGTGGCGCAAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580870.5
CDS-3UTR CAA 90 bp TGCATGAACTCCCTCTTGATCTTGCCAGGCAACCAGGAGCTGCTTAGCTCTCATGGCAAATACCTCTATTaGTTCTCCTGTTACAGGTTT +
Preference number: 5 (lower is better)
Translates to: CMNSLLILPGNQELLSSHGKYLY*FSCYRF
Trigger: AAACCTGTAACAGGAGAACAAATAGAGGTATTTGCC...ATGAGAGCTAAGCAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS TCA 90 bp AGGCCCAGGCTGCAGTTTTGCTCACTACTTGGCATTTCTGGTCCATaGAGATATTTATCTTGTTTCTGGAAGCCCAGCCTTGTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: RPRLQFCSLLGISGP*RYLSCFWKPSLVSF
Trigger: AAAAGAGACAAGGCTGGGCTTCCAGAAACAAGATAAATATCTTCATGGACCAGAAATGCCAAGTAGTGAGCAAAACTGCAGCCTGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582313.5
CDS CCA 90 bp CAACAATACAAAAGGTGTAGATGCGGTACAAATACCCAGGCAGTCTaGCTCCACAGTCTGTTTTCTTCACCACTAAGCTTCAGTTACTCC +
Preference number: 5 (lower is better)
Translates to: QQYKRCRCGTNTQAV*LHSLFSSPLSFSYS
Trigger: GGAGTAACTGAAGCTTAGTGGTGAAGAAAACAGACTGTGGAGCCAGACTGCCTGGGTATTTGTACCGCATCTACACCTTTTGTATTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS-3UTR CAA 90 bp CTCTGCAAGTTAAGACCTGATTTCTCAGACAGAGGGAAAAGCCTGGCCAAAAAGGGCTTGATGTTTTTGTaGTTCAAGGCCTCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: LCKLRPDFSDRGKSLAKKGLMFL*FKASLV
Trigger: TACCAGAGAGGCCTTGAACAACAAAAACATCAAGCC...CTTTTTGGCCAGGCTTTTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000581269.5
ENST00000631280.2
CDS-3UTR CAA 90 bp AAAGGTGTAGATGCGGTACAAATACCCAGGCAGTCTGGCTCCACAGTCTGTTTTAATGGCTTGATGTTTTaGTTGTTCAAGGCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: KGVDAVQIPRQSGSTVCFNGLMF*LFKASL
Trigger: CAGAGAGGCCTTGAACAACAAAAACATCAAGCCATT...AAAACAGACTGTGGAGCCAGACTGCCTGGGTATTTGTACCGCATCTACACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS-3UTR CAA 90 bp TCCAGACTTATTCAGTGCATTAATCAGATTCTCAGGTGTTGCATGAACTCCCTCTCTCCTGTTACAGGTTaGTCTCGCCGAACATCAGGA +
Preference number: 5 (lower is better)
Translates to: SRLIQCINQILRCCMNSLSPVTG*SRRTSG
Trigger: TCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGA...GAGGGAGTTCATGCAACACCTGAGAATCTGATTAATGCACTGAATAAGTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp TTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTCATTTTCCTTAGCCAGAATCTTCCATaGTTCACCCAGCTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: LFSCYRFVSPNIRTFIFLSQNLP*FTQLVG
Trigger: GCCAACAAGCTGGGTGAACAATGGAAGATTCTGGCT...AAGGAAAATGAAAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp GAATCTTCCATTGTTCACCCAGCTTGTTGGCAAATACCTCTATTTGTTCTCCTGAGCCAGAATCTTCCATaGTTCACCCAGCTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: ESSIVHPACWQIPLFVLLSQNLP*FTQLVG
Trigger: GCCAACAAGCTGGGTGAACAATGGAAGATTCTGGCT...CAGGAGAACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACAATGGAAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS GCA 90 bp AATATTCTTGGACTAGACCTTTTGCGCCACTACAGGATGTATCACTaGTTATACAGGAAAGTGAGAGAGCCCACCTTCACCTCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: NILGLDLLRHYRMYH*LYRKVREPTFTSSS
Trigger: AGAACTAGAGGTGAAGGTGGGCTCTCTCACTTTCCTGTATAAGCAGTGATACATCCTGTAGTGGCGCAAAAGGTCTAGTCCAAGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580870.5
CDS-3UTR CAA 90 bp ATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAACTCCCTCTTGATCTaGCCAGGCAACCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: MFIVYQNQWTSYQMLLGNNSLLI*PGNQEL
Trigger: CAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGAGTT...GTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp GAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTTCAAGATATTCTAACTCCCTCTTGATCTaGCCAGGCAACCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: EGGGNSLASFITIFSRYSNSLLI*PGNQEL
Trigger: CAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGAGTT...AGAATATCTTGAAAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTAACTCCCTCTTGATCTaGCCAGGCAACCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSNSLLI*PGNQEL
Trigger: CAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGAGTT...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp GTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTGATGTTCTTTCTTTCACAAACTCCCTCTTGATCTaGCCAGGCAACCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VLFRIILVGLVSDVLSFTNSLLI*PGNQEL
Trigger: CAGCTCCTGGTTGCCTGGCAAGATCAAGAGGGAGTT...TGTGAAAGAAAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp AATACCTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTGGCTTGATGTTTTTGTaGTTCAAGGCCTCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: NTSICSPVTGLSRRTSGLGLMFL*FKASLV
Trigger: TACCAGAGAGGCCTTGAACAACAAAAACATCAAGCC...AAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp ATGAGATACTGCAACAGGATGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAATGGGCATGTGTTCCCTaGTCTCTGATTTACAGGCTT +
Preference number: 5 (lower is better)
Translates to: MRYCNRMCRRKLLSLSCKWACVP*SLIYRL
Trigger: AAGCCTGTAAATCAGAGACAAGGGAACACATGCCCA...TTTACAACTGAGTGACAGTAACTTTCGTCGACACATCCTGTTGCAGTATCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGCCAGAATCTTCCATaGTTCACCCAGCTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHSQNLP*FTQLVG
Trigger: GCCAACAAGCTGGGTGAACAATGGAAGATTCTGGCT...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AGATATTGGAATAAAATGAGATACTGCAACAGGATGTGTCGACGAAAGTTACTGTGCATGAACTCCCTCTaGATCTTGCCAGGCAACCAG +
Preference number: 5 (lower is better)
Translates to: RYWNKMRYCNRMCRRKLLCMNSL*ILPGNQ
Trigger: CTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCA...CAGTAACTTTCGTCGACACATCCTGTTGCAGTATCTCATTTTATTCCAATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp AACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTTGCATGAACTCCCTCTaGATCTTGCCAGGCAACCAG +
Preference number: 5 (lower is better)
Translates to: NQWTSYQMLLGNKIYHSFCMNSL*ILPGNQ
Trigger: CTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCA...AAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS GCA 90 bp TCAAACCCAGCAGGTAGTGAAGTCATTATACAACTAATACGGCATTaGTCAGTGTCCTTAACACAAATACCGTTAAGTAACAGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: SNPAGSEVIIQLIRH*SVSLTQIPLSNSGL
Trigger: GAGCCCACTGTTACTTAACGGTATTTGTGTTAAGGACACTGAGCAATGCCGTATTAGTTGTATAATGACTTCACTACCTGCTGGGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584470.5
CDS-3UTR CAA 90 bp CTCTGCAAGTTAAGACCTGATTTCTCAGACAGAGGGAAAAGCCTGGCCAAAAAGTCCTGCTCATTTGTATaGAAAACAGTGACATTTTCC +
Preference number: 5 (lower is better)
Translates to: LCKLRPDFSDRGKSLAKKSCSFV*KTVTFS
Trigger: GGAAAATGTCACTGTTTTCAATACAAATGAGCAGGA...CTTTTTGGCCAGGCTTTTCCCTCTGTCTGAGAAATCAGGTCTTAACTTGCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000581269.5
ENST00000631280.2
CDS-3UTR CAA 90 bp TCCACCATATTTTCAGGGTCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTCCAAAGATTCCAAAGCCTaGTTAACTCCTCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: STIFSGSACSMASSKNSSKDSKA*LTPHFP
Trigger: TGGGAAATGAGGAGTTAACAAGGCTTTGGAATCTTT...GGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp ATGAGATACTGCAACAGGATGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAAGGAGGCGGTAATTCCTaGGCTAGCTTTATTACCATA +
Preference number: 5 (lower is better)
Translates to: MRYCNRMCRRKLLSLSCKGGGNS*ASFITI
Trigger: TATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCC...TTTACAACTGAGTGACAGTAACTTTCGTCGACACATCCTGTTGCAGTATCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp AACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTTCTCCTGTTACAGGTTaGTCTCGCCGAACATCAGGA +
Preference number: 5 (lower is better)
Translates to: NQWTSYQMLLGNKIYHSFSPVTG*SRRTSG
Trigger: TCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGA...AAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp ATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTCTCCTGTTACAGGTTaGTCTCGCCGAACATCAGGA +
Preference number: 5 (lower is better)
Translates to: IVYQNQWTSYQMLLGNKISPVTG*SRRTSG
Trigger: TCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGA...GATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AATACCTCTATTTGTTCTCCTGTTACAGGTTTGTCTCGCCGAACATCAGGACTTTGTTCACCCAGCTTGTaGGCAAATACCTCTATTTGT +
Preference number: 5 (lower is better)
Translates to: NTSICSPVTGLSRRTSGLCSPSL*ANTSIC
Trigger: ACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACA...AAGTCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGAACAAATAGAGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTTGCATGAACTCCCTCTaGATCTTGCCAGGCAACCAG +
Preference number: 5 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGCMNSL*ILPGNQ
Trigger: CTGGTTGCCTGGCAAGATCAAGAGGGAGTTCATGCA...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAATCCATCAGCTTTTCACTTGTCAGATTCTCAGGTGTaGCATGAACTCCCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: CVDESYCHSVVNPSAFHLSDSQV*HELPLD
Trigger: ATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGA...CAAGTGAAAAGCTGATGGATTTACAACTGAGTGACAGTAACTTTCGTCGACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp CAAAAAGAGCTGAATCCGTCCACAGAAGACTGTATTCTGGGATTTAGACAATCTAATGGCTTGATGTTTTaGTTGTTCAAGGCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: QKELNPSTEDCILGFRQSNGLMF*LFKASL
Trigger: CAGAGAGGCCTTGAACAACAAAAACATCAAGCCATT...AGATTGTCTAAATCCCAGAATACAGTCTTCTGTGGACGGATTCAGCTCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000581116.1
ENST00000581269.5
ENST00000631280.2
CDS-3UTR CAA 90 bp TGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAATCCATCAGCTTTTCACTTGAATGGCTTGATGTTTTaGTTGTTCAAGGCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: CVDESYCHSVVNPSAFHLNGLMF*LFKASL
Trigger: CAGAGAGGCCTTGAACAACAAAAACATCAAGCCATT...CAAGTGAAAAGCTGATGGATTTACAACTGAGTGACAGTAACTTTCGTCGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp TCCACCATATTTTCAGGGTCTGCCTGTTCAATGGCTTCTTCAAAGAATTCCTCCTCCTGCTCATTTGTATaGAAAACAGTGACATTTTCC +
Preference number: 5 (lower is better)
Translates to: STIFSGSACSMASSKNSSSCSFV*KTVTFS
Trigger: GGAAAATGTCACTGTTTTCAATACAAATGAGCAGGA...GGAGGAATTCTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp AACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTTGGGCATGTGTTCCCTaGTCTCTGATTTACAGGCTT +
Preference number: 5 (lower is better)
Translates to: NQWTSYQMLLGNKIYHSFWACVP*SLIYRL
Trigger: AAGCCTGTAAATCAGAGACAAGGGAACACATGCCCA...AAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAATCTCCTGTTACAGGTTaGTCTCGCCGAACATCAGGA +
Preference number: 5 (lower is better)
Translates to: FIVYQNQWTSYQMLLGNKSPVTG*SRRTSG
Trigger: TCCTGATGTTCGGCGAGACAAACCTGTAACAGGAGA...TTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TTGTCTCTGATTTACAGGCTTCCATATTATCAGGGCAAAGATTCCAAAGCCTTGCATTGTTCACCCAGCTaGTTGGCAAATACCTCTATT +
Preference number: 5 (lower is better)
Translates to: LSLIYRLPYYQGKDSKALHCSPS*LANTSI
Trigger: AATAGAGGTATTTGCCAACAAGCTGGGTGAACAATG...CAAGGCTTTGGAATCTTTGCCCTGATAATATGGAAGCCTGTAAATCAGAGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATAGCCAGAATCTTCCATaGTTCACCCAGCTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNSQNLP*FTQLVG
Trigger: GCCAACAAGCTGGGTGAACAATGGAAGATTCTGGCT...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACTCAGATTCTCAGGTGTaGCATGAACTCCCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHSDSQV*HELPLD
Trigger: ATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGA...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS TCA 90 bp CTCGGGTGCTGTTCTCTTCCGAATTATTCTCGTAGGTTTGGTATCTaGTGTTCTGTCGTGAACAAAACATACACTTTCTTTCACAAAACT +
Preference number: 5 (lower is better)
Translates to: LGCCSLPNYSRRFGI*CSVVNKTYTFFHKT
Trigger: AGTTTTGTGAAAGAAAGTGTATGTTTTGTTCACGACAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAACAGCACCCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579891.5
CDS-3UTR CAA 90 bp ACAATCTTCTTAGGAGATCATTGCACATACGTAGTAAGTAATTTTTCCCAGCAGGGCTTGATGTTTTTGTaGTTCAAGGCCTCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: TIFLGDHCTYVVSNFSQQGLMFL*FKASLV
Trigger: TACCAGAGAGGCCTTGAACAACAAAAACATCAAGCC...CTGCTGGGAAAAATTACTTACTACGTATGTGCAATGATCTCCTAAGAAGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS-3UTR CAA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAATGGCTTGATGTTTTaGTTGTTCAAGGCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHNGLMF*LFKASL
Trigger: CAGAGAGGCCTTGAACAACAAAAACATCAAGCCATT...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTATGGGCATGTGTTCCCTaGTCTCTGATTTACAGGCTT +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVWACVP*SLIYRL
Trigger: AAGCCTGTAAATCAGAGACAAGGGAACACATGCCCA...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp CAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTAATTGGGCATGTGTTCCCTaGTCTCTGATTTACAGGCTT +
Preference number: 5 (lower is better)
Translates to: QWTSYQMLLGNKIYHSFNWACVP*SLIYRL
Trigger: AAGCCTGTAAATCAGAGACAAGGGAACACATGCCCA...ATTAAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp GTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATGGAGGCGGTAATTCCTaGGCTAGCTTTATTACCATA +
Preference number: 5 (lower is better)
Translates to: VYQNQWTSYQMLLGNKIYGGGNS*ASFITI
Trigger: TATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCC...ATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACCATTGTTCACCCAGCTaGTTGGCAAATACCTCTATT +
Preference number: 5 (lower is better)
Translates to: YQNQWTSYQMLLGNKIYHHCSPS*LANTSI
Trigger: AATAGAGGTATTTGCCAACAAGCTGGGTGAACAATG...GTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAAGGCTTGATGTTTTTGTaGTTCAAGGCCTCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: LLFTKTSGPLIKCCLVTKGLMFL*FKASLV
Trigger: TACCAGAGAGGCCTTGAACAACAAAAACATCAAGCC...TTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAGGCTTGATGTTTTTGTaGTTCAAGGCCTCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVGLMFL*FKASLV
Trigger: TACCAGAGAGGCCTTGAACAACAAAAACATCAAGCC...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp ATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAATGGCTTGATGTTTTaGTTGTTCAAGGCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: MFIVYQNQWTSYQMLLGNNGLMF*LFKASL
Trigger: CAGAGAGGCCTTGAACAACAAAAACATCAAGCCATT...GTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp CAAAAAGAGCTGAATCCGTCCACAGAAGACTGTATTCTGGGATTTAGACAATCTTCCTGCTCATTTGTATaGAAAACAGTGACATTTTCC +
Preference number: 5 (lower is better)
Translates to: QKELNPSTEDCILGFRQSSCSFV*KTVTFS
Trigger: GGAAAATGTCACTGTTTTCAATACAAATGAGCAGGA...AGATTGTCTAAATCCCAGAATACAGTCTTCTGTGGACGGATTCAGCTCTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000581269.5
ENST00000631280.2
CDS-3UTR CAA 90 bp CCTGTTTTTATTTCTTCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCTTTGAACTTTTGAATTaGACCTGCCCCTTGAGATAT +
Preference number: 5 (lower is better)
Translates to: PVFISSEGGGNSLASFITFELLN*TCPLRY
Trigger: ATATCTCAAGGGGCAGGTCAAATTCAAAAGTTCAAA...GGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGAAGAAATAAAAACAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTGGAGGCGGTAATTCCTaGGCTAGCTTTATTACCATA +
Preference number: 5 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGGGGNS*ASFITI
Trigger: TATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCC...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAGGAGGCGGTAATTCCTaGGCTAGCTTTATTACCATA +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVGGGNS*ASFITI
Trigger: TATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCC...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTTGTTCACCCAGCTTGTaGGCAAATACCTCTATTTGT +
Preference number: 5 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSCSPSL*ANTSIC
Trigger: ACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACA...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTCATTGTTCACCCAGCTaGTTGGCAAATACCTCTATT +
Preference number: 5 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSHCSPS*LANTSI
Trigger: AATAGAGGTATTTGCCAACAAGCTGGGTGAACAATG...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTATCAGATTCTCAGGTGTaGCATGAACTCCCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVSDSQV*HELPLD
Trigger: ATCAAGAGGGAGTTCATGCAACACCTGAGAATCTGA...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TATTCATTTTCCACCATATTTTCAGGGTCTGCCTGTTCAATGGCTTCTTCAAAGAATTTGACCTGCCCCTaGAGATATTGGAATAAAATG +
Preference number: 5 (lower is better)
Translates to: YSFSTIFSGSACSMASSKNLTCP*RYWNKM
Trigger: CATTTTATTCCAATATCTCAAGGGGCAGGTCAAATT...CTTTGAAGAAGCCATTGAACAGGCAGACCCTGAAAATATGGTGGAAAATGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp AGATATTGGAATAAAATGAGATACTGCAACAGGATGTGTCGACGAAAGTTACTGAAAGATTCCAAAGCCTaGTTAACTCCTCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: RYWNKMRYCNRMCRRKLLKDSKA*LTPHFP
Trigger: TGGGAAATGAGGAGTTAACAAGGCTTTGGAATCTTT...CAGTAACTTTCGTCGACACATCCTGTTGCAGTATCTCATTTTATTCCAATATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS-3UTR CAA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTTGTTCACCCAGCTTGTaGGCAAATACCTCTATTTGT +
Preference number: 5 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGCSPSL*ANTSIC
Trigger: ACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACA...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTATGTTCACCCAGCTTGTaGGCAAATACCTCTATTTGT +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVCSPSL*ANTSIC
Trigger: ACAAATAGAGGTATTTGCCAACAAGCTGGGTGAACA...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TTTATTTCTTCAGAAGGAGGCGGTAATTCCTTGGCTAGCTTTATTACCATATTTCATTGTTCACCCAGCTaGTTGGCAAATACCTCTATT +
Preference number: 5 (lower is better)
Translates to: FISSEGGGNSLASFITIFHCSPS*LANTSI
Trigger: AATAGAGGTATTTGCCAACAAGCTGGGTGAACAATG...AAATATGGTAATAAAGCTAGCCAAGGAATTACCGCCTCCTTCTGAAGAAATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580038.5
ENST00000631280.2
CDS GCA 90 bp ATGAACAAAACAACTGGAGAACAAAGGAAGTGCCAAAATGTGCACTaGATAATAGAGATGAGAAATAAGAGTGAACTAATTCAACTGGGA +
Preference number: 5 (lower is better)
Translates to: MNKTTGEQRKCQNVH*IIEMRNKSELIQLG
Trigger: TCCCAGTTGAATTAGTTCACTCTTATTTCTCATCTCTATTATGCAGTGCACATTTTGGCACTTCCTTTGTTCTCCAGTTGTTTTGTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578224.5
CDS CCA 90 bp AGGCAGAACTTGAAGAATAAACAAAATCAGATAGGTGGAGAAGTATaGGGAGAAGACGTTTTAAATAAAGCATGTCATGTCCAAGATTAC +
Preference number: 5 (lower is better)
Translates to: RQNLKNKQNQIGGEV*GEDVLNKACHVQDY
Trigger: GTAATCTTGGACATGACATGCTTTATTTAAAACGTCTTCTCCCCATACTTCTCCACCTATCTGATTTTGTTTATTCTTCAAGTTCTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578224.5
CDS-3UTR CAA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTTCCTGCTCATTTGTATaGAAAACAGTGACATTTTCC +
Preference number: 5 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSSCSFV*KTVTFS
Trigger: GGAAAATGTCACTGTTTTCAATACAAATGAGCAGGA...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp ATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCAATTTGACCTGCCCCTaGAGATATTGGAATAAAATG +
Preference number: 5 (lower is better)
Translates to: IVYQNQWTSYQMLLGNKINLTCP*RYWNKM
Trigger: CATTTTATTCCAATATCTCAAGGGGCAGGTCAAATT...GATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp TTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTAATTTGACCTGCCCCTaGAGATATTGGAATAAAATG +
Preference number: 5 (lower is better)
Translates to: LFTKTSGPLIKCCLVTKSNLTCP*RYWNKM
Trigger: CATTTTATTCCAATATCTCAAGGGGCAGGTCAAATT...AGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp ATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTTTGAACTTTTGAATTaGACCTGCCCCTTGAGATAT +
Preference number: 5 (lower is better)
Translates to: IVYQNQWTSYQMLLGNKIFELLN*TCPLRY
Trigger: ATATCTCAAGGGGCAGGTCAAATTCAAAAGTTCAAA...GATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCTATCACAGTTTTTTTGAACTTTTGAATTaGACCTGCCCCTTGAGATAT +
Preference number: 5 (lower is better)
Translates to: NQWTSYQMLLGNKIYHSFFELLN*TCPLRY
Trigger: ATATCTCAAGGGGCAGGTCAAATTCAAAAGTTCAAA...AAAACTGTGATAGATTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAAAAGATTCCAAAGCCTaGTTAACTCCTCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVKDSKA*LTPHFP
Trigger: TGGGAAATGAGGAGTTAACAAGGCTTTGGAATCTTT...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAGGCAAATACCTCTATTaGTTCTCCTGTTACAGGTTT +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVGKYLY*FSCYRF
Trigger: AAACCTGTAACAGGAGAACAAATAGAGGTATTTGCC...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTTGTCTTTCACAAAACTaGGGCAACCTTCATTTTTCC +
Preference number: 5 (lower is better)
Translates to: KMFIVYQNQWTSYQMLLGCLSQN*GNLHFS
Trigger: GGAAAAATGAAGGTTGCCCAAGTTTTGTGAAAGACA...ACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616322.4
CDS-3UTR CAA 90 bp TTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAACAAAATCCTGCTCATTTGTATaGAAAACAGTGACATTTTCC +
Preference number: 5 (lower is better)
Translates to: LLFTKTSGPLIKCCLVTKSCSFV*KTVTFS
Trigger: GGAAAATGTCACTGTTTTCAATACAAATGAGCAGGA...TTTTGTTACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAAATTTGACCTGCCCCTaGAGATATTGGAATAAAATG +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVNLTCP*RYWNKM
Trigger: CATTTTATTCCAATATCTCAAGGGGCAGGTCAAATT...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTATTTGAACTTTTGAATTaGACCTGCCCCTTGAGATAT +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVFELLN*TCPLRY
Trigger: ATATCTCAAGGGGCAGGTCAAATTCAAAAGTTCAAA...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261600.11
ENST00000580038.5
ENST00000616322.4
ENST00000631280.2
CDS-3UTR CAA 90 bp AAATGTTTATTGTTTACCAAAACCAGTGGACCTCTTATCAAATGCTGCTTGGTAATTATTCTCGTAGGTTaGGTATCTGATGTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: KCLLFTKTSGPLIKCCLVIILVG*VSDVLS
Trigger: AGACAGAACATCAGATACCAAACCTACGAGAATAAT...TACCAAGCAGCATTTGATAAGAGGTCCACTGGTTTTGGTAAACAATAAACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616322.4
CDS GCA 72 bp CACCTGCCTTGGATAGAGAGTCCAGCAGGCCCAGGCTaGAGTTTTGCTCACTACTTGGCATTTCTGGTCCAT +
Preference number: 6 (lower is better)
Translates to: HLPWIESPAGPG*SFAHYLAFLVH
Trigger: ATGGACCAGAAATGCCAAGTAGTGAGCAAAACTGCAGCCTGGGCCTGCTGGACTCTCTATCCAAGGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582313.5
CDS CCA 72 bp ACTTGTAGCCAAATTCCTGGACACCACCACCTGCCTTaGATAGAGAGTCCAGCAGGCCCAGGCTGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: TCSQIPGHHHLP*IESPAGPGCSF
Trigger: AAAACTGCAGCCTGGGCCTGCTGGACTCTCTATCCAAGGCAGGTGGTGGTGTCCAGGAATTTGGCTACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582313.5
ENST00000583228.5
CDS TCA 72 bp ACAGGGTGCCAGAACCTCACCCCTGAGAGCGTTAAATaGCAGTGTCAGGTAAGGATCCTAAGTGGGACTATC +
Preference number: 6 (lower is better)
Translates to: TGCQNLTPESVK*QCQVRILSGTI
Trigger: GATAGTCCCACTTAGGATCCTTACCTGACACTGTCATTTAACGCTCTCAGGGGTGAGGTTCTGGCACCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577429.5
CDS TCA 72 bp GATAAAAGTTCCACCCTAGTCCTTGGCTTCAAGAAGTaGATCTGGCTCTGGCCCCTTGTCCCACATGGTGCA +
Preference number: 6 (lower is better)
Translates to: DKSSTLVLGFKK*IWLWPLVPHGA
Trigger: TGCACCATGTGGGACAAGGGGCCAGAGCCAGATTCACTTCTTGAAGCCAAGGACTAGGGTGGAACTTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582313.5
ENST00000583228.5
CDS CAA 72 bp TCCCTCTCTGTGTACATCCTTCCCTGTCTAGCAGTTTaGCATCTGCTTCTACCAGGGCCCCTGAGTCCAAAA +
Preference number: 6 (lower is better)
Translates to: SLSVYILPCLAV*HLLLPGPLSPK
Trigger: TTTTGGACTCAGGGGCCCTGGTAGAAGCAGATGCAAAACTGCTAGACAGGGAAGGATGTACACAGAGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582313.5
ENST00000583228.5
CDS CAA 90 bp CCAGGTACCTGGCTGAAGGTACTTAACAATGGCTTGATGTTTTTGTaGTTCAAGGCCTCTCTGGTAGACTTCGTAAACCGCGTCCGCGCT +
Preference number: 6 (lower is better)
Translates to: PGTWLKVLNNGLMFL*FKASLVDFVNRVRA
Trigger: AGCGCGGACGCGGTTTACGAAGTCTACCAGAGAGGCCTTGAACAACAAAAACATCAAGCCATTGTTAAGTACCTTCAGCCAGGTACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000261600.11
ENST00000578224.5
ENST00000579232.5
ENST00000580038.5
ENST00000580544.1
ENST00000580870.5
ENST00000581116.1
ENST00000581269.5
ENST00000582313.5
ENST00000616322.4
ENST00000631280.2
CDS CAA 90 bp CTGCCAGGTACCTGGCTGAAGGTACTTAACAATGGCTTGATGTTTTaGTTGTTCAAGGCCTCTCTGGTAGACTTCGTAAACCGCGTCCGC +
Preference number: 6 (lower is better)
Translates to: LPGTWLKVLNNGLMF*LFKASLVDFVNRVR
Trigger: GCGGACGCGGTTTACGAAGTCTACCAGAGAGGCCTTGAACAACAAAAACATCAAGCCATTGTTAAGTACCTTCAGCCAGGTACCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000261600.11
ENST00000578224.5
ENST00000579232.5
ENST00000580038.5
ENST00000580544.1
ENST00000580870.5
ENST00000581116.1
ENST00000581269.5
ENST00000582313.5
ENST00000616322.4
ENST00000631280.2
CDS TCA 72 bp GATCCTAAGTGGGACTATCTTCACCTGCAGAAGGAGTaGACTTGGGAAGACCTCAGAGTTGGAAAGACTCCC +
Preference number: 6 (lower is better)
Translates to: DPKWDYLHLQKE*TWEDLRVGKTP
Trigger: GGGAGTCTTTCCAACTCTGAGGTCTTCCCAAGTTCACTCCTTCTGCAGGTGAAGATAGTCCCACTTAGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577429.5
CDS GCA 72 bp GGACTAGACCTTTTGCGCCACTACAGGATGTATCACTaGTTATACAGGAAAGTGAGAGAGCCCACCTTCACC +
Preference number: 6 (lower is better)
Translates to: GLDLLRHYRMYH*LYRKVREPTFT
Trigger: GGTGAAGGTGGGCTCTCTCACTTTCCTGTATAAGCAGTGATACATCCTGTAGTGGCGCAAAAGGTCTAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580870.5
CDS GCA 72 bp TGTCAGGTAAGGATCCTAAGTGGGACTATCTTCACCTaGAGAAGGAGTGAACTTGGGAAGACCTCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: CQVRILSGTIFT*RRSELGKTSEL
Trigger: CAACTCTGAGGTCTTCCCAAGTTCACTCCTTCTGCAGGTGAAGATAGTCCCACTTAGGATCCTTACCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577429.5
CDS CAA 90 bp TGGATAGAGAGTCCAGCAGGCCCAGGCTGCAGTTTTGCTCACTACTaGGCATTTCTGGTCCATGAAGATATTTATCTTGTTTCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: WIESPAGPGCSFAHY*AFLVHEDIYLVSGS
Trigger: GCTTCCAGAAACAAGATAAATATCTTCATGGACCAGAAATGCCAAGTAGTGAGCAAAACTGCAGCCTGGGCCTGCTGGACTCTCTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582313.5
CDS CCA 72 bp AAAAGGTGTAGATGCGGTACAAATACCCAGGCAGTCTaGCTCCACAGTCTGTTTTCTTCACCACTAAGCTTC +
Preference number: 6 (lower is better)
Translates to: KRCRCGTNTQAV*LHSLFSSPLSF
Trigger: GAAGCTTAGTGGTGAAGAAAACAGACTGTGGAGCCAGACTGCCTGGGTATTTGTACCGCATCTACACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581116.1
CDS CAA 90 bp ATGCCTTACCTGCCAGGTACCTGGCTGAAGGTACTTAACAATGGCTaGATGTTTTTGTTGTTCAAGGCCTCTCTGGTAGACTTCGTAAAC +
Preference number: 6 (lower is better)
Translates to: MPYLPGTWLKVLNNG*MFLLFKASLVDFVN
Trigger: GTTTACGAAGTCTACCAGAGAGGCCTTGAACAACAAAAACATCAAGCCATTGTTAAGTACCTTCAGCCAGGTACCTGGCAGGTAAGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580544.1
CDS CCA 72 bp GTCCAGCAGGCCCAGGCTGCAGTTTTGCTCACTACTTaGCATTTCTGGTCCATGAAGATATTTATCTTGTTT +
Preference number: 6 (lower is better)
Translates to: VQQAQAAVLLTT*HFWSMKIFILF
Trigger: AAACAAGATAAATATCTTCATGGACCAGAAATGCCAAGTAGTGAGCAAAACTGCAGCCTGGGCCTGCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582313.5
CDS CAA 72 bp TGGCTGAAGGTACTTAACAATGGCTTGATGTTTTTGTaGTTCAAGGCCTCTCTGGTAGACTTCGTAAACCGC +
Preference number: 6 (lower is better)
Translates to: WLKVLNNGLMFL*FKASLVDFVNR
Trigger: GCGGTTTACGAAGTCTACCAGAGAGGCCTTGAACAACAAAAACATCAAGCCATTGTTAAGTACCTTCAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000261600.11
ENST00000578224.5
ENST00000579232.5
ENST00000580038.5
ENST00000580544.1
ENST00000580870.5
ENST00000581116.1
ENST00000581269.5
ENST00000582313.5
ENST00000616322.4
ENST00000631280.2
CDS CAA 90 bp TCATTTTCACTGCCAGGTACCTGGCTGAAGGTACTTAACAATGGCTaGATGTTTTTGTTGTTCAAGGCCTCTCTGGTAGACTTCGTAAAC +
Preference number: 6 (lower is better)
Translates to: SFSLPGTWLKVLNNG*MFLLFKASLVDFVN
Trigger: GTTTACGAAGTCTACCAGAGAGGCCTTGAACAACAAAAACATCAAGCCATTGTTAAGTACCTTCAGCCAGGTACCTGGCAGTGAAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000261600.11
ENST00000578224.5
ENST00000579232.5
ENST00000580038.5
ENST00000580870.5
ENST00000581116.1
ENST00000581269.5
ENST00000582313.5
ENST00000616322.4
ENST00000631280.2
CDS CAA 90 bp TGTGTCGACGAAAGTTACTGTCACTCAGTTGTAAATCCATCAGCGTaGCCTTCTGTATCCCACTCCATTCTTATGGGTTCAATTTCCTTC +
Preference number: 6 (lower is better)
Translates to: CVDESYCHSVVNPSA*PSVSHSILMGSISF
Trigger: GAAGGAAATTGAACCCATAAGAATGGAGTGGGATACAGAAGGCAACGCTGATGGATTTACAACTGAGTGACAGTAACTTTCGTCGACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583228.5
CDS CAA 72 bp GAAAGTTACTGTCACTCAGTTGTAAATCCATCAGCGTaGCCTTCTGTATCCCACTCCATTCTTATGGGTTCA +
Preference number: 6 (lower is better)
Translates to: ESYCHSVVNPSA*PSVSHSILMGS
Trigger: TGAACCCATAAGAATGGAGTGGGATACAGAAGGCAACGCTGATGGATTTACAACTGAGTGACAGTAACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583228.5
CDS CAA 72 bp TCGGGTGCTGTTCTCTTCCGAATTATTCTCGTAGGTTaGGTATCTGATGTTCTGTCTTTCACAAAACTTGGG +
Preference number: 6 (lower is better)
Translates to: SGAVLFRIILVG*VSDVLSFTKLG
Trigger: CCCAAGTTTTGTGAAAGACAGAACATCAGATACCAAACCTACGAGAATAATTCGGAAGAGAACAGCACCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616322.4
CDS TCA 72 bp TGTTCTTTTCTAAAACCTCTCCTGACTCCTTTAGACTaGAGTTTAGAGAGCCATGTTGGCTCTATTCCCTCT +
Preference number: 6 (lower is better)
Translates to: CSFLKPLLTPLD*SLESHVGSIPS
Trigger: AGAGGGAATAGAGCCAACATGGCTCTCTAAACTTCAGTCTAAAGGAGTCAGGAGAGGTTTTAGAAAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578224.5
CDS GCA 72 bp ATCCAAAACATCTCCCAACAATACAAAAGGTGTAGATaGGGTACAAATACCTTCAAGTGGAGCACAAGCCAA +
Preference number: 6 (lower is better)
Translates to: IQNISQQYKRCR*GTNTFKWSTSQ
Trigger: TTGGCTTGTGCTCCACTTGAAGGTATTTGTACCGCATCTACACCTTTTGTATTGTTGGGAGATGTTTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578529.5
CDS CCA 72 bp AGCTGTTTCATAAGTATACTGAGCATATCACATATCTaGTCACTGAGCAAGCAGATGGACACAAAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: SCFISILSISHI*SLSKQMDTKLS
Trigger: AGACAGCTTTGTGTCCATCTGCTTGCTCAGTGACCAGATATGTGATATGCTCAGTATACTTATGAAACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582313.5
ENST00000583228.5
CDS CAA 90 bp ACCATTCCCTCCATTTTCTTCTTTGGAAATCCTACTAGACAGATGTaGGAAATTCCCAATCTATTCACCATGGCTTTTAACTGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: TIPSIFFFGNPTRQM*EIPNLFTMAFNCSS
Trigger: GGAAGAGCAGTTAAAAGCCATGGTGAATAGATTGGGAATTTCCAACATCTGTCTAGTAGGATTTCCAAAGAAGAAAATGGAGGGAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583228.5
CDS TCA 72 bp TTTATCCTGCTTGGCAGTTGTGACACACTTTTAAGCTaGGGATTTGAGATTTCCTTCAATTCTTTGCAATCC +
Preference number: 6 (lower is better)
Translates to: FILLGSCDTLLS*GFEISFNSLQS
Trigger: GGATTGCAAAGAATTGAAGGAAATCTCAAATCCTCAGCTTAAAAGTGTGTCACAACTGCCAAGCAGGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583228.5
CDS CAA 72 bp ACTACTTGGCATTTCTGGTCCATGAAGATATTTATCTaGTTTCTGGAAGCCCAGCCTTGTCTCTTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: TTWHFWSMKIFI*FLEAQPCLFCF
Trigger: AAAACAAAAGAGACAAGGCTGGGCTTCCAGAAACAAGATAAATATCTTCATGGACCAGAAATGCCAAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582313.5
CDS CAA 90 bp CCAGTGTATAGTTTAATTCTGTGTGCTGAGTTTTGGTTTCAATTATaGTATTTTTCATTCCCAAGACTCCCGATTAGTTGTATCGACTGT +
Preference number: 6 (lower is better)
Translates to: PVYSLILCAEFWFQL*YFSFPRLPISCIDC
Trigger: ACAGTCGATACAACTAATCGGGAGTCTTGGGAATGAAAAATACAATAATTGAAACCAAAACTCAGCACACAGAATTAAACTATACACTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583228.5
CDS GCA 72 bp ACAACTGGAGAACAAAGGAAGTGCCAAAATGTGCACTaGATAATAGAGATGAGAAATAAGAGTGAACTAATT +
Preference number: 6 (lower is better)
Translates to: TTGEQRKCQNVH*IIEMRNKSELI
Trigger: AATTAGTTCACTCTTATTTCTCATCTCTATTATGCAGTGCACATTTTGGCACTTCCTTTGTTCTCCAGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578224.5
CDS CAA 72 bp ATTTATCTTGTTTCTGGAAGCCCAGCCTTGTCTCTTTaGTTTTCTCGTTTATATTTTACCCGTCATTGCTTT +
Preference number: 6 (lower is better)
Translates to: IYLVSGSPALSL*FSRLYFTRHCF
Trigger: AAAGCAATGACGGGTAAAATATAAACGAGAAAACAAAAGAGACAAGGCTGGGCTTCCAGAAACAAGATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582313.5