RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THNSL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000144115

Ensembl transcript IDs: ENST00000324166.7, ENST00000343544.8, ENST00000377254.7, ENST00000419759.5, ENST00000449349.5, ENST00000464022.1, ENST00000475910.1, ENST00000476349.1, ENST00000496165.1, ENST00000496844.6, ENST00000674169.1, ENST00000674282.1, ENST00000674334.2

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCCGCGGGAGTCTCAGGGGTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: IQLSPLRIRVQRVSL*SRATISAGVSGVRP
Trigger: TGGCCTGACCCCTGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343544.8
3UTR GCA 90 bp TGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTaGAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGGGAG +
Preference number: 1 (lower is better)
Translates to: CPEASASSCHLSASG*SVSPCAPGLRSPRE
Trigger: CTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR CCA 90 bp CAAAGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTaGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGC +
Preference number: 1 (lower is better)
Translates to: QSLREGGELLPPSQV*GPKPLEPWSVLCPS
Trigger: GCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR TCA 90 bp GAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAG +
Preference number: 1 (lower is better)
Translates to: EPWSVLCPSLFFCRP*NFHYSSDTAARAGE
Trigger: CTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR GCA 90 bp ACTAAGGCTCAGAGAACATACAAAGCCTGCGTGAAGGTGGTGAGCTaGTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGCCAT +
Preference number: 1 (lower is better)
Translates to: TKAQRTYKACVKVVS*SHLHRSGVLNPWSH
Trigger: ATGGCTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCTTTGTATGTTCTCTGAGCCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR CCA 90 bp AGCAGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTaGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAG +
Preference number: 1 (lower is better)
Translates to: SRVEASDKVGQNLWI*FGGQNQLRLREHTK
Trigger: CTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR TCA 90 bp CTGGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGGGCTCCAGATCCAGCTaGGCAGCCTCCCGGAAACCT +
Preference number: 2 (lower is better)
Translates to: LVTRHRLARERSKASWLQGSRSS*AASRKP
Trigger: AGGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCC...CTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR GCA 90 bp TCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTCAGCTCAGACACTGCTaGACGGGCCGGGGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SGVLNPWSHGQSCAQASSQLRHC*TGRGGR
Trigger: CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTG...AGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR GCA 90 bp GCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCTACAGCTCAGACACTaGTGCACGGGCCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: ACVKVVSCSHLHRSGVLNLQLRH*CTGRGG
Trigger: CCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAG...GTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR GCA 90 bp GGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGGGAGTCTCAGGGGAGTGCTGGCAAACTaGTCCTCCTGGTTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: GAACLLVLQGYDLRGSLRGVLAN*SSWLEA
Trigger: GGCCTCCAACCAGGAGGAGCAGTTTGCCAGCACTCC...CCTGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343544.8
3UTR CAA 90 bp AGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATCTCCGCGGGAGTCTCAGGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: SIQLSPLRIRVQRVS*CSRATISAGVSGVR
Trigger: CCTGACCCCTGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343544.8
3UTR-3UTR TCA 90 bp ACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGGGCTCCAGATCCAGCTaGGCAGCCTCCCGGAAACCT +
Preference number: 2 (lower is better)
Translates to: TRHRLARERSKASWLQIQGSRSS*AASRKP
Trigger: AGGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCC...CTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR TCA 90 bp AAAGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAGGCTCCAGATCCAGCTaGGCAGCCTCCCGGAAACCT +
Preference number: 2 (lower is better)
Translates to: KACVKVVSCSHLHRSGVLGSRSS*AASRKP
Trigger: AGGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCC...TAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR CCA 90 bp AGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCGGAGCAAAGCCAGCTaGCTCCAGATCCAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: RLARERSKASWLQIQLSSRSKAS*LQIQLS
Trigger: GCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCG...GCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR CCA 90 bp GCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAGGGAGGCCACCTTCACAGGTCTaGGGTCCTAAACCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: ALKLSLQLRHCCTGRGGRPPSQV*GPKPLE
Trigger: CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGG...CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR TCA 90 bp GCAGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGGGCTCCAGATCCAGCTaGGCAGCCTCCCGGAAACCT +
Preference number: 2 (lower is better)
Translates to: AGWKPLTRWARTFGFGLGGSRSS*AASRKP
Trigger: AGGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCC...CCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR TCA 90 bp GCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGGAGGTGTTGAGGGCATaGCTCCTCCACTGTCGGCTA +
Preference number: 2 (lower is better)
Translates to: AQTSQGTEQSQLAPDPAEEVLRA*LLHCRL
Trigger: TAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTC...CTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR GCA 90 bp GCAGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGTTCCGGGAACTTGGCTaGAGAGGCAGGGGCGAGGCA +
Preference number: 2 (lower is better)
Translates to: AGWKPLTRWARTFGFGLGFRELG*RGRGEA
Trigger: TGCCTCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAA...CCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343544.8
3UTR-3UTR TCA 90 bp GGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGGGAGTCTCAGGCATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 2 (lower is better)
Translates to: GAACLLVLQGYDLRGSLRHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...CCTGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343544.8
ENST00000449349.5
3UTR-3UTR TCA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAGCTACTGGGAGGTGTTaGGGGCATGACTCCTCCACT +
Preference number: 2 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGATGRC*GHDSST
Trigger: AGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAGC...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR GCA 90 bp TCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGCAGCTCAGACACTGCTaGACGGGCCGGGGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SCAQASSFAGPETFTTAQQLRHC*TGRGGR
Trigger: CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTG...CTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR GCA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCCTACAGCTCAGACACTaGTGCACGGGCCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SHGQSCAQASSFAGPETFLQLRH*CTGRGG
Trigger: CCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAG...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR CCA 90 bp TTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAAACCCCTGGAGCCATaGTCAGTCCTGTGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: FAGPETFTTAQTLLHGPGKPLEP*SVLCPS
Trigger: GCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTT...CCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR CCA 90 bp CTGGGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTAGCACCGGGGAGTGCTaGCAAACTGCTCCTCCTGGT +
Preference number: 2 (lower is better)
Translates to: LGGVEGMTPPLSAKVLNGSTGEC*QTAPPG
Trigger: ACCAGGAGGAGCAGTTTGCCAGCACTCCCCGGTGCT...ACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343544.8
3UTR CAA 90 bp TGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCC +
Preference number: 2 (lower is better)
Translates to: CRLRSSMVSRSISIQ*SPLRIRVQRVSLCS
Trigger: GGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR TCA 90 bp CTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCGGCTCCAGATCCAGCTaGGCAGCCTCCCGGAAACCT +
Preference number: 2 (lower is better)
Translates to: LLLQALKLSLQLRHCCTGGSRSS*AASRKP
Trigger: AGGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCC...GCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR GCA 90 bp CCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACTACAGCTCAGACACTaGTGCACGGGCCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: PVPKPLLLQALKLSLQLRLQLRH*CTGRGG
Trigger: CCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAG...TCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR GCA 90 bp AGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAAGTGAAGGTGGTGAGCTaGTCCCACCTTCACAGGTCT +
Preference number: 2 (lower is better)
Translates to: SLREGGELLPPSQVWGPKVKVVS*SHLHRS
Trigger: AGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCAC...TTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR GCA 90 bp AGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGGCCTCTCCGCATCAGGGTaGAGCGTGTCTCCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: RVEASDKVGQNLWIWFGGLSASG*SVSPCA
Trigger: AGCACAAGGAGACACGCTGCACCCTGATGCGGAGAG...GCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
3UTR-3UTR GCA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGACCATGGTCAGTCCTGTaGCCAAGCCTCTTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGPWSVL*PSLFFC
Trigger: GCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGG...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR GCA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCC +
Preference number: 2 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKQRVSL*SRATIS
Trigger: GGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR GCA 90 bp CCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCC +
Preference number: 2 (lower is better)
Translates to: PPNLRLMGRVHKAAQKVHQRVSL*SRATIS
Trigger: GGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG...ATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR GCA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGCTCTCCGCATCAGGGTaGAGCGTGTCTCCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKLSASG*SVSPCA
Trigger: AGCACAAGGAGACACGCTGCACCCTGATGCGGAGAG...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR TCA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGACATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 2 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR CCA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCGGGGTCCTAAACCCCTaGAGCCATGGTCAGTCCTGT +
Preference number: 2 (lower is better)
Translates to: SHGQSCAQASSFAGPETFGVLNP*SHGQSC
Trigger: ACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR CCA 90 bp AAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCCAGCTTCCGGGAACTTaGCTGCAGAGGCAGGGGCGA +
Preference number: 2 (lower is better)
Translates to: KPLLLQALKLSLQLRHCCQLPGT*LQRQGR
Trigger: TCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTG...GCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343544.8
3UTR-3UTR TCA 90 bp CTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 2 (lower is better)
Translates to: LNPWSHGQSCAQASSFAGHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...GCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR TCA 90 bp CTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCTTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCA +
Preference number: 2 (lower is better)
Translates to: LREGGELLPPSQVWGPKPFFCRP*NFHYSS
Trigger: TGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAA...GGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR TCA 90 bp CCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCGCTACTGGGAGGTGTTaGGGGCATGACTCCTCCACT +
Preference number: 2 (lower is better)
Translates to: PKPLLLQALKLSLQLRHCATGRC*GHDSST
Trigger: AGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAGC...GCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR GCA 90 bp AGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGGCAGAACATACAAAGCCTaGGTGAAGGTGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: RVEASDKVGQNLWIWFGGRTYKA*VKVVSC
Trigger: GCAGCTCACCACCTTCACGCAGGCTTTGTATGTTCT...GCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR GCA 90 bp CAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCTCTCCGCATCAGGGTaGAGCGTGTCTCCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: QSCAQASSFAGPETFTTALSASG*SVSPCA
Trigger: AGCACAAGGAGACACGCTGCACCCTGATGCGGAGAG...AGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR GCA 90 bp GTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCTCCGCATCAGGGTaGAGCGTGTCTCCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: VSPVPKPLLLQALKLSLQLSASG*SVSPCA
Trigger: AGCACAAGGAGACACGCTGCACCCTGATGCGGAGAG...CTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR TCA 90 bp GTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGCATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 2 (lower is better)
Translates to: VLNGVPKHQHPVVTSPHQHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...CTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR CCA 90 bp GTCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCCAGAACCTTTGGATTTaGTTTGGGGGCCAAAATCAA +
Preference number: 2 (lower is better)
Translates to: VWGPKPLEPWSVLCPSLFQNLWI*FGGQNQ
Trigger: TTGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTG...GAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR GCA 90 bp TTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCC +
Preference number: 2 (lower is better)
Translates to: LVWGPKSTKAQRTYKACVQRVSL*SRATIS
Trigger: GGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG...CACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
3UTR-3UTR CCA 90 bp GGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: GVLNPWSHGQSCAQASSFEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...AAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR TCA 90 bp TCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 2 (lower is better)
Translates to: SSFAGPETFTTAQTLLHGHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...CCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR TCA 90 bp GATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGAGGTGTTGAGGGCATaGCTCCTCCACTGTCGGCTA +
Preference number: 2 (lower is better)
Translates to: DLVWGPKSTKAQRTYKACEVLRA*LLHCRL
Trigger: TAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTC...GCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
3UTR-3UTR CCA 90 bp GATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCCCACCTTCACAGGTCTaGGGTCCTAAACCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: DLVWGPKSTKAQRTYKACPPSQV*GPKPLE
Trigger: CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGG...GCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR CCA 90 bp CTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: LLLQALKLSLQLRHCCTGEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...GCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR TCA 90 bp GCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACTTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCA +
Preference number: 2 (lower is better)
Translates to: ASSFAGPETFTTAQTLLHFFCRP*NFHYSS
Trigger: TGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAA...GTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR TCA 90 bp CAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTTTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCA +
Preference number: 2 (lower is better)
Translates to: QSCAQASSFAGPETFTTAFFCRP*NFHYSS
Trigger: TGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAA...AGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR CCA 90 bp CAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: QSCAQASSFAGPETFTTAEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...AGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR CCA 90 bp CCTTTGGATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAAAACCCCTGGAGCCATaGTCAGTCCTGTGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: PLDLVWGPKSTKAQRTYKKPLEP*SVLCPS
Trigger: GCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTT...TTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR CCA 90 bp TTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: LVWGPKSTKAQRTYKACVEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...CACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR CAA 90 bp GGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGGGAGTCTCAGGACAGCTTCCGGGAACTaGGCTGCAGAGGCAGGGGCG +
Preference number: 3 (lower is better)
Translates to: GAACLLVLQGYDLRGSLRTASGN*AAEAGA
Trigger: CGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTGT...CCTGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343544.8
3UTR GCA 72 bp TCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCCGCGGGAGTCTCAGGG +
Preference number: 3 (lower is better)
Translates to: SPLRIRVQRVSL*SRATISAGVSG
Trigger: CCCTGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343544.8
ENST00000449349.5
3UTR-3UTR CAA 90 bp GAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATC +
Preference number: 3 (lower is better)
Translates to: EGGELLPPSQVWGPKPLEVQRVS*CSRATI
Trigger: GATCGTAGCCCTGGAGCACAAGGAGACACGCTGCAC...CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
3UTR-3UTR CAA 90 bp GCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATC +
Preference number: 3 (lower is better)
Translates to: ACVKVVSCSHLHRSGVLNVQRVS*CSRATI
Trigger: GATCGTAGCCCTGGAGCACAAGGAGACACGCTGCAC...GTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
3UTR-3UTR CAA 90 bp CTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATC +
Preference number: 3 (lower is better)
Translates to: LNPWSHGQSCAQASSFAGVQRVS*CSRATI
Trigger: GATCGTAGCCCTGGAGCACAAGGAGACACGCTGCAC...GCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR CAA 90 bp TCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGG +
Preference number: 3 (lower is better)
Translates to: SGVLNPWSHGQSCAQASSSISIQ*SPLRIR
Trigger: CCTGATGCGGAGAGGTGACAACTGGATGCTGATGCT...AGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR GCA 72 bp CAGAGAACATACAAAGCCTGCGTGAAGGTGGTGAGCTaGTCCCACCTTCACAGGTCTGGGGTCCTAAACCCC +
Preference number: 3 (lower is better)
Translates to: QRTYKACVKVVS*SHLHRSGVLNP
Trigger: GGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCTTTGTATGTTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR CAA 90 bp GAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGCCAGAACCTTTGGATTaGGTTTGGGGGCCAAAATCA +
Preference number: 3 (lower is better)
Translates to: EGGELLPPSQVWGPKPLEPEPLD*VWGPKS
Trigger: TGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTGG...CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR CAA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGTGGGCCAGAACCTTaGGATTTGGTTTGGGGGCCA +
Preference number: 3 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTGGPEP*DLVWGP
Trigger: TGGCCCCCAAACCAAATCCAAAGGTTCTGGCCCACC...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR CAA 90 bp CAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTGGTGGGCCAGAACCTTaGGATTTGGTTTGGGGGCCA +
Preference number: 3 (lower is better)
Translates to: QSCAQASSFAGPETFTTAGGPEP*DLVWGP
Trigger: TGGCCCCCAAACCAAATCCAAAGGTTCTGGCCCACC...AGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR CAA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGG +
Preference number: 3 (lower is better)
Translates to: SHGQSCAQASSFAGPETFSISIQ*SPLRIR
Trigger: CCTGATGCGGAGAGGTGACAACTGGATGCTGATGCT...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR CCA 72 bp AGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTaGATTTGGTTTGGGGGCCAAAATCAACTAAGGCTC +
Preference number: 3 (lower is better)
Translates to: RVEASDKVGQNL*IWFGGQNQLRL
Trigger: GAGCCTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR-3UTR CAA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCCCCAAGCCTCTTCTTTaGCAGGCCCTGAAACTTTCA +
Preference number: 3 (lower is better)
Translates to: SHGQSCAQASSFAGPETFPKPLL*QALKLS
Trigger: TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR-3UTR CAA 90 bp CAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGG +
Preference number: 3 (lower is better)
Translates to: QASSFAGPETFTTAQTLLSISIQ*SPLRIR
Trigger: CCTGATGCGGAGAGGTGACAACTGGATGCTGATGCT...CAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
3UTR-3UTR CAA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGCCCAAGCCTCTTCTTTaGCAGGCCCTGAAACTTTCA +
Preference number: 3 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTPKPLL*QALKLS
Trigger: TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
3UTR GCA 72 bp CCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTaGGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGG +
Preference number: 3 (lower is better)
Translates to: PKSTKAQRTYKA*VKVVSCSHLHR
Trigger: CCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
3UTR CCA 72 bp GAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTaGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAA +
Preference number: 3 (lower is better)
Translates to: EASDKVGQNLWI*FGGQNQLRLRE
Trigger: TTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CTGGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGTCCCTGACGGTGCGGTaGGGCTTCCGGTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LVTRHRLARERSKASWLQSLTVR*GFRSGP
Trigger: CGGCCCCGACCGGAAGCCCCACCGCACCGTCAGGGA...CTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377254.7
CDS-3UTR GCA 90 bp CAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGACAGCTCAGACACTGCTaGACGGGCCGGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QGTEQSQLAPDPAEQPPGQLRHC*TGRGGR
Trigger: CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTG...TCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCCAGGGCTGCCCGGGCTaGGAATGTGCGCACTCCCGA +
Preference number: 4 (lower is better)
Translates to: SQGTEQSQLAPDPAEQPPQGCPG*ECAHSR
Trigger: TCGGGAGTGCGCACATTCGCAGCCCGGGCAGCCCTG...GGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp ACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTGGGCCCCCTCAAAGTTaGCCCGTGGGGCTACGCCCC +
Preference number: 4 (lower is better)
Translates to: TSQGTEQSQLAPDPAEQPGPPQS*PVGLRP
Trigger: GGGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCC...AGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GTCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCGGGCCCCCTCAAAGTTaGCCCGTGGGGCTACGCCCC +
Preference number: 4 (lower is better)
Translates to: VWGPKPLEPWSVLCPSLFGPPQS*PVGLRP
Trigger: GGGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCC...GAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCCAGCTCAGACACTGCTaGACGGGCCGGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVVTSPHQGAACLLVLQGQLRHC*TGRGGR
Trigger: CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTG...GCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp GAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACCCAGCTCAGACACTGCTaGACGGGCCGGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ERSKASWLQIQLSSLPETQLRHC*TGRGGR
Trigger: CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTG...GGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGGGCTCCAGATCCAGCTaGGCAGCCTCCCGGAAACCT +
Preference number: 4 (lower is better)
Translates to: LRIRVQRVSLCSRATISAGSRSS*AASRKP
Trigger: AGGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCC...CGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp CATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGGGAGTCTACAGCTCAGACACTaGTGCACGGGCCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HQGAACLLVLQGYDLRGSLQLRH*CTGRGG
Trigger: CCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAG...ACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp CCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCCTACAGCTCAGACACTaGTGCACGGGCCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PVVTSPHQGAACLLVLQGLQLRH*CTGRGG
Trigger: CCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAG...GCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp CCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCGGCTCCAGATCCAGCTaGGCAGCCTCCCGGAAACCT +
Preference number: 4 (lower is better)
Translates to: PVVTSPHQGAACLLVLQGGSRSS*AASRKP
Trigger: AGGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCC...GCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp GAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACCGTTCACGGCCACCGCTaGGTGGGGGCACAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: ERSKASWLQIQLSSLPETVHGHR*VGAQQV
Trigger: TACTTGCTGTGCCCCCACTCAGCGGTGGCCGTGAAC...GGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR GCA 90 bp CAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTCTACAGCTCAGACACTaGTGCACGGGCCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QAQTSQGTEQSQLAPDPALQLRH*CTGRGG
Trigger: CCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAG...AGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAACCCGGGCTGCGAATGTaGGCACTCCCGAGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: PWSHGQSCAQASSFAGPEPGLRM*ALPSPR
Trigger: ACGCGGACTCGGGAGTGCGCACATTCGCAGCCCGGG...TTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGACCCGGGCTGCGAATGTaGGCACTCCCGAGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGPGLRM*ALPSPR
Trigger: ACGCGGACTCGGGAGTGCGCACATTCGCAGCCCGGG...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGCTCAAAGTTGACCCGTaGGGCTACGCCCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LRIRVQRVSLCSRATISALKVDP*GYAPGA
Trigger: AGCACCAGGGGCGTAGCCCCACGGGTCAACTTTGAG...CGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343544.8
ENST00000496844.6
CDS-3UTR CCA 90 bp TCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCCAGCTTCCGGGAACTTaGCTGCAGAGGCAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: SPHQGAACLLVLQGYDLRQLPGT*LQRQGR
Trigger: TCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTG...GCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp CTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGCGGAGCAAAGCCAGCTaGCTCCAGATCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LRIRVQRVSLCSRATISARSKAS*LQIQLS
Trigger: GCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCG...CGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp CTACTGGGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGGCCCCCTCAAAGTTaGCCCGTGGGGCTACGCCCC +
Preference number: 4 (lower is better)
Translates to: LLGGVEGMTPPLSAKVLNGPPQS*PVGLRP
Trigger: GGGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCC...ATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343544.8
ENST00000496844.6
CDS-3UTR GCA 90 bp CAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAGTCATTGCGGTTCACTaGCACGACCAGACGGATGGG +
Preference number: 4 (lower is better)
Translates to: QGTEQSQLAPDPAEQPPGVIAVH*HDQTDG
Trigger: CCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGAC...TCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp ACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGTTCCGGGAACTTGGCTaGAGAGGCAGGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: TRHRLARERSKASWLQIQFRELG*RGRGEA
Trigger: TGCCTCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAA...CTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTTTCCGGGAACTTGGCTaGAGAGGCAGGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: QAQTSQGTEQSQLAPDPAFRELG*RGRGEA
Trigger: TGCCTCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAA...AGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACTTCCGGGAACTTGGCTaGAGAGGCAGGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: ACVKVVSCSHLHRSGVLNFRELG*RGRGEA
Trigger: TGCCTCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAA...GTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp CGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGCGGGGAGTGCTGGGCTaGTGCCTGTCTATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: REGGELLPPSQVWGPKPLRGVLG*CLSICW
Trigger: CCAGCAGATAGACAGGCAGCAGCCCAGCACTCCCCG...CAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR CCA 90 bp GCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACACCGGCAGCCCCTGTTaGCACAACCACCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: ACVKVVSCSHLHRSGVLNTGSPC*HNHLHQ
Trigger: CTGGTGGAGGTGGTTGTGCCAACAGGGGCTGCCGGT...GTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCACCGGCAGCCCCTGTTaGCACAACCACCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: LREGGELLPPSQVWGPKPTGSPC*HNHLHQ
Trigger: CTGGTGGAGGTGGTTGTGCCAACAGGGGCTGCCGGT...GGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp AGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGCAGCTTCCGGGAACTTaGCTGCAGAGGCAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: RHRLARERSKASWLQIQLQLPGT*LQRQGR
Trigger: TCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTG...CAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp TCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCAGCTTCCGGGAACTTaGCTGCAGAGGCAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: SSCHLSASGCSVSPCAPGQLPGT*LQRQGR
Trigger: TCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTG...CCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp GCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAGGGAGGCAGCGGCCCATGGTCTaGGTGATGGCTTCATCCGAC +
Preference number: 4 (lower is better)
Translates to: ALKLSLQLRHCCTGRGGRQRPMV*VMASSD
Trigger: GTCGGATGAAGCCATCACCCAGACCATGGGCCGCTG...CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR CCA 90 bp CTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCAGCGGCCCATGGTCTaGGTGATGGCTTCATCCGAC +
Preference number: 4 (lower is better)
Translates to: LARERSKASWLQIQLSSLQRPMV*VMASSD
Trigger: GTCGGATGAAGCCATCACCCAGACCATGGGCCGCTG...GAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR TCA 90 bp GGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACGGGATTCCCAACATGTaGGCAGGGTGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GTEQSQLAPDPAEQPPGNGIPNM*AGWKPL
Trigger: CAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCC...GTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp GCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGGGCCCATGGTCTGGGTaGTGGCTTCATCCGACACTG +
Preference number: 4 (lower is better)
Translates to: AQTSQGTEQSQLAPDPAEGPWSG*WLHPTL
Trigger: CAGTGTCGGATGAAGCCATCACCCAGACCATGGGCC...CTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR GCA 90 bp TCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTGAGGCCCCCGTCAGGTaGATAGCCAGAGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SGVLNPWSHGQSCAQASSEAPVR*IAREEG
Trigger: GCCCTCTTCTCTGGCTATGCACCTGACGGGGGCCTC...AGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAGTCATTGCGGTTCACTaGCACGACCAGACGGATGGG +
Preference number: 4 (lower is better)
Translates to: RERSKASWLQIQLSSLPEVIAVH*HDQTDG
Trigger: CCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGAC...TTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp TCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCC +
Preference number: 4 (lower is better)
Translates to: SPHQGAACLLVLQGYDLRQRVSL*SRATIS
Trigger: GGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG...GCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGCAGCTCAGACACTGCTaGACGGGCCGGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKQLRHC*TGRGGR
Trigger: CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTG...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCCAGCTCAGACACTGCTaGACGGGCCGGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSSMVSRSISIQLSPLRIQLRHC*TGRGGR
Trigger: CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTG...GATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp TCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTCGGGGAGTGCTGGGCTaGTGCCTGTCTATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGVLNPWSHGQSCAQASSRGVLG*CLSICW
Trigger: CCAGCAGATAGACAGGCAGCAGCCCAGCACTCCCCG...AGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR CCA 90 bp ACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCTCAAAGTTGACCCGTaGGGCTACGCCCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TSPHQGAACLLVLQGYDLLKVDP*GYAPGA
Trigger: AGCACCAGGGGCGTAGCCCCACGGGTCAACTTTGAG...GAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343544.8
ENST00000496844.6
CDS-3UTR CCA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAACCGGCAGCCCCTGTTaGCACAACCACCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGTGSPC*HNHLHQ
Trigger: CTGGTGGAGGTGGTTGTGCCAACAGGGGCTGCCGGT...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp AAAGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTACAGCTTCCGGGAACTTaGCTGCAGAGGCAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: KACVKVVSCSHLHRSGVLQLPGT*LQRQGR
Trigger: TCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTG...TAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCGGGGTCCTAAACCCCTaGAGCCATGGTCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PVVTSPHQGAACLLVLQGGVLNP*SHGQSC
Trigger: ACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC...GCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp ACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGAGCACCGGGGAGTGCTaGGCTGCTGCCTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: TRHRLARERSKASWLQIQSTGEC*AAACLS
Trigger: AGATAGACAGGCAGCAGCCCAGCACTCCCCGGTGCT...CTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
3UTR CAA 72 bp TTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATCTCCGCGGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LSPLRIRVQRVS*CSRATISAGVS
Trigger: TGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343544.8
ENST00000449349.5
CDS-3UTR TCA 90 bp CAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTGGGCCCCCTCAAAGTTaGCCCGTGGGGCTACGCCCC +
Preference number: 4 (lower is better)
Translates to: QSCAQASSFAGPETFTTAGPPQS*PVGLRP
Trigger: GGGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCC...AGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGATGGACCACTTCTCTGTaGCGGAATCTGCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: QGTEQSQLAPDPAEQPPGWTTSL*RNLLKA
Trigger: AGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCA...TCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCCGGCAAACACAGTCTTaGTCGGCTCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SQGTEQSQLAPDPAEQPPRQTQS*SAHRAH
Trigger: ATGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCG...GGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACCGGACCCGGGACCAGTTaGTCGAATTCAGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: ERSKASWLQIQLSSLPETGPGTS*SNSGSS
Trigger: TGATGAGCCTGAATTCGATCAACTGGTCCCGGGTCC...GGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGGAGGTGTTGAGGGCATaGCTCCTCCACTGTCGGCTA +
Preference number: 4 (lower is better)
Translates to: RHRLARERSKASWLQIQLEVLRA*LLHCRL
Trigger: TAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTC...CAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GTCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCGAGGTGTTGAGGGCATaGCTCCTCCACTGTCGGCTA +
Preference number: 4 (lower is better)
Translates to: VWGPKPLEPWSVLCPSLFEVLRA*LLHCRL
Trigger: TAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTC...GAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp ACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCGCTACTGGGAGGTGTTaGGGGCATGACTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: TSPHQGAACLLVLQGYDLATGRC*GHDSST
Trigger: AGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAGC...GAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp ACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGGGGATTCCCAACATGTaGGCAGGGTGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRHRLARERSKASWLQIQGIPNM*AGWKPL
Trigger: CAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCC...CTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp CAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCCGAGTCCGCGTCCCTaGCGGTGCGGTGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QASSFAGPETFTTAQTLLPSPRP*RCGGAS
Trigger: GGAAGCCCCACCGCACCGTCAGGGACGCGGACTCGG...CAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377254.7
CDS-3UTR GCA 90 bp CTGGGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGAGGCCCCCGTCAGGTaGATAGCCAGAGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LGGVEGMTPPLSAKVLNGEAPVR*IAREEG
Trigger: GCCCTCTTCTCTGGCTATGCACCTGACGGGGGCCTC...ACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343544.8
ENST00000496844.6
CDS-3UTR GCA 90 bp CTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCTTCCGGGAACTTGGCTaGAGAGGCAGGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LNPWSHGQSCAQASSFAGFRELG*RGRGEA
Trigger: TGCCTCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAA...GCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp TGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCC +
Preference number: 4 (lower is better)
Translates to: CVKVVSCSHLHRSGVLNPQRVSL*SRATIS
Trigger: GGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG...GGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp AGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCC +
Preference number: 4 (lower is better)
Translates to: RLARERSKASWLQIQLSSQRVSL*SRATIS
Trigger: GGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG...GCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCCAGGGCTGCCCGGGCTaGGAATGTGCGCACTCCCGA +
Preference number: 4 (lower is better)
Translates to: SHGQSCAQASSFAGPETFQGCPG*ECAHSR
Trigger: TCGGGAGTGCGCACATTCGCAGCCCGGGCAGCCCTG...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp CCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATCTTCAGGGCTGCCCGGGCTaGGAATGTGCGCACTCCCGA +
Preference number: 4 (lower is better)
Translates to: PNLRLMGRVHKAAQKVHLQGCPG*ECAHSR
Trigger: TCGGGAGTGCGCACATTCGCAGCCCGGGCAGCCCTG...AAGATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp ACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCAGGGCTCTTGTCACCTaGCTGTCAGAGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TSPHQGAACLLVLQGYDLRALVT*LSEPES
Trigger: GCTCTCTGGCTCTGACAGCCAGGTGACAAGAGCCCT...GAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CCA 90 bp ATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGCGGAGCAAAGCCAGCTaGCTCCAGATCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: IQLSPLRIRVQRVSLCSRRSKAS*LQIQLS
Trigger: GCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCG...CCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp CCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAACGGAGCAAAGCCAGCTaGCTCCAGATCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PWSHGQSCAQASSFAGPERSKAS*LQIQLS
Trigger: GCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCG...TTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGAAACCCCTGGAGCCATaGTCAGTCCTGTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: AQTSQGTEQSQLAPDPAEKPLEP*SVLCPS
Trigger: GCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTT...CTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCAAACCCCTGGAGCCATaGTCAGTCCTGTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LREGGELLPPSQVWGPKPKPLEP*SVLCPS
Trigger: GCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTT...GGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp TGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGAAAACCCCTGGAGCCATaGTCAGTCCTGTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: CHLSASGCSVSPCAPGLRKPLEP*SVLCPS
Trigger: GCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTT...TCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp AGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGGGGGTCCTAAACCCCTaGAGCCATGGTCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RHRLARERSKASWLQIQLGVLNP*SHGQSC
Trigger: ACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC...CAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp TCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGGGGGTCCTAAACCCCTaGAGCCATGGTCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSCHLSASGCSVSPCAPGGVLNP*SHGQSC
Trigger: ACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC...CCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp CGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGGGAGTCTCAGGGGTCAGGTTCCTACAACCACAGTaGCGTGCTTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RVSLCSRATISAGVSGVRFLQPQ*RASPSS
Trigger: AGAAGAGGGAGAAGCACGTCACTGTGGTTGTAGGAA...CCTGACCCCTGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS-3UTR TCA 90 bp GCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAGGGAGGCGGCAAACACAGTCTTaGTCGGCTCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ALKLSLQLRHCCTGRGGRRQTQS*SAHRAH
Trigger: ATGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCG...CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp ACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGGGACCCGGGACCAGTTaGTCGAATTCAGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: TRHRLARERSKASWLQIQGPGTS*SNSGSS
Trigger: TGATGAGCCTGAATTCGATCAACTGGTCCCGGGTCC...CTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CTGGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGGGCAGGCCTATCTTTTaGGCAATGTACCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVTRHRLARERSKASWLQGRPIF*AMYPAA
Trigger: TGCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCC...CTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCGGCAGGCCTATCTTTTaGGCAATGTACCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVVTSPHQGAACLLVLQGGRPIF*AMYPAA
Trigger: TGCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCC...GCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR TCA 90 bp TCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCTTTCAAACTGCTCCATaGGGGCTCTTGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SPHQGAACLLVLQGYDLRFQTAP*GLLSPG
Trigger: GCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAA...GCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR TCA 90 bp TCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTGGGATTCCCAACATGTaGGCAGGGTGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGVLNPWSHGQSCAQASSGIPNM*AGWKPL
Trigger: CAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCC...AGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp AGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAGCATATGTGACGCCATaGCACAGCTCCAACACGTTC +
Preference number: 4 (lower is better)
Translates to: RERSKASWLQIQLSSLPEAYVTP*HSSNTF
Trigger: GAACGTGTTGGAGCTGTGGCATGGCGTCACATATGC...TTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAGTCATTGCGGTTCACTaGCACGACCAGACGGATGGG +
Preference number: 4 (lower is better)
Translates to: PWSHGQSCAQASSFAGPEVIAVH*HDQTDG
Trigger: CCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGAC...TTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGGGAGTCTCAGGGGTCTGGGTCCTTTCAAACTaGTCCATGAGGGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: QRVSLCSRATISAGVSGVWVLSN*SMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCA...GACCCCTGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS-3UTR GCA 90 bp ACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCTGTCTCTCCCACTTaGTGTGCAGTTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSQGTEQSQLAPDPAEQPPVSPT*CAVPWA
Trigger: TGCCCAAGGAACTGCACAGCAAGTGGGAGAGACAGG...AGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS-3UTR GCA 90 bp GGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGTCGGAGTGCTGGCAAACTaGTCCTCCTGGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GGVEGMTPPLSAKVLNGVGVLAN*SSWLEA
Trigger: GGCCTCCAACCAGGAGGAGCAGTTTGCCAGCACTCC...GACACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS-3UTR GCA 90 bp ATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCTACAGCTCAGACACTaGTGCACGGGCCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: MTPPLSAKVLNGVPKHQHLQLRH*CTGRGG
Trigger: CCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAG...ATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp GGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACACCCGGGCTGCGAATGTaGGCACTCCCGAGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: GQSCAQASSFAGPETFTTPGLRM*ALPSPR
Trigger: ACGCGGACTCGGGAGTGCGCACATTCGCAGCCCGGG...TGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp AGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCGGGGAGTGCTTGCTGTaGAGTTCCTTGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: RLARERSKASWLQIQLSSGECLL*SSLGRF
Trigger: GAATCTGCCCAAGGAACTGCACAGCAAGCACTCCCC...GCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377254.7
ENST00000496844.6
CDS-3UTR GCA 90 bp ATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGACTGTGGGAGCTCCATaGCCCTCACGCAACAGGACT +
Preference number: 4 (lower is better)
Translates to: IQLSPLRIRVQRVSLCSRTVGAP*PSRNRT
Trigger: AGTCCTGTTGCGTGAGGGGCATGGAGCTCCCACAGT...CCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449349.5
CDS-3UTR CCA 90 bp CTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCACCGGCAGCCCCTGTTaGCACAACCACCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: LRSSMVSRSISIQLSPLRTGSPC*HNHLHQ
Trigger: CTGGTGGAGGTGGTTGTGCCAACAGGGGCTGCCGGT...GCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp GAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGCCACGACCAGACGGATaGGCAGGCCTATCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: EGGELLPPSQVWGPKPLEPRPDG*AGLSFE
Trigger: CTCAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGG...CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR CCA 90 bp GGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTCGGAGCAAAGCCAGCTaGCTCCAGATCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GVLNPWSHGQSCAQASSFRSKAS*LQIQLS
Trigger: GCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCG...AAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAAAACCCCTGGAGCCATaGTCAGTCCTGTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PWSHGQSCAQASSFAGPEKPLEP*SVLCPS
Trigger: GCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTT...TTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GCAGCCTCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGGGGTCCTAAACCCCTaGAGCCATGGTCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: AASRKPPNLRLMGRVHKAGVLNP*SHGQSC
Trigger: ACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC...TGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGCGGCAAACACAGTCTTaGTCGGCTCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GVPKHQHPVVTSPHQGAARQTQS*SAHRAH
Trigger: ATGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCG...CGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp ATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGGACCCGGGACCAGTTaGTCGAATTCAGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: IQLSPLRIRVQRVSLCSRGPGTS*SNSGSS
Trigger: TGATGAGCCTGAATTCGATCAACTGGTCCCGGGTCC...CCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp CCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAGGACCCGGGACCAGTTaGTCGAATTCAGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: PWSHGQSCAQASSFAGPEGPGTS*SNSGSS
Trigger: TGATGAGCCTGAATTCGATCAACTGGTCCCGGGTCC...TTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGGGACAGTCCTGTGGATaGTGTCATTGCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RHRLARERSKASWLQIQLGQSCG*CHCGSL
Trigger: CAGTGAACCGCAATGACATCATCCACAGGACTGTCC...CAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCGGACAGTCCTGTGGATaGTGTCATTGCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RLARERSKASWLQIQLSSGQSCG*CHCGSL
Trigger: CAGTGAACCGCAATGACATCATCCACAGGACTGTCC...GCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGTTTCAAACTGCTCCATaGGGGCTCTTGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: AQTSQGTEQSQLAPDPAEFQTAP*GLLSPG
Trigger: GCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAA...CTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGAGGTGTTGAGGGCATaGCTCCTCCACTGTCGGCTA +
Preference number: 4 (lower is better)
Translates to: GVLNPWSHGQSCAQASSFEVLRA*LLHCRL
Trigger: TAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTC...AAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGGGCTCCAGATCCAGCTaGGCAGCCTCCCGGAAACCT +
Preference number: 4 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVGSRSS*AASRKP
Trigger: AGGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCC...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATCAGGGTGGAAGCCTCTaGCAAGGTGGGCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: PPNLRLMGRVHKAAQKVHQGGSL*QGGPEP
Trigger: AGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTG...ATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGCAGGGTGGAAGCCTCTaGCAAGGTGGGCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKQGGSL*QGGPEP
Trigger: AGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTG...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp CCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGGGGATTCCCAACATGTaGGCAGGGTGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PKPLEPWSVLCPSLFFCRGIPNM*AGWKPL
Trigger: CAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCC...CCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp CTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCAGGATAGGAGAGTGTaGTCCACTGGCACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LNPWSHGQSCAQASSFAGQDRRV*STGTGS
Trigger: GGACCCTGTGCCAGTGGAGCACACTCTCCTATCCTG...GCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp ACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGGCATATGTGACGCCATaGCACAGCTCCAACACGTTC +
Preference number: 4 (lower is better)
Translates to: TRHRLARERSKASWLQIQAYVTP*HSSNTF
Trigger: GAACGTGTTGGAGCTGTGGCATGGCGTCACATATGC...CTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCC +
Preference number: 4 (lower is better)
Translates to: PGAMVSPVPKPLLLQALKQRVSL*SRATIS
Trigger: GGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG...TTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTACAGCTCAGACACTaGTGCACGGGCCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VSPVPKPLLLQALKLSLQLQLRH*CTGRGG
Trigger: CCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAG...CTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCCATGGTCAGTCCTGTaGCCAAGCCTCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LREGGELLPPSQVWGPKPPWSVL*PSLFFC
Trigger: GCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGG...GGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp AAAGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAGTGAAGGTGGTGAGCTaGTCCCACCTTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: KACVKVVSCSHLHRSGVLVKVVS*SHLHRS
Trigger: AGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCAC...TAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCTGCCTCTGAAAGCTTaGTGTGCAGTTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AQTSQGTEQSQLAPDPAELPLKA*CAVPWA
Trigger: TGCCCAAGGAACTGCACAGCAAGCTTTCAGAGGCAG...CTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR GCA 90 bp GGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAAGCACCGGGGAGTGCTaGAAGGTTACCGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GQSCAQASSFAGPETFTTSTGEC*KVTGSP
Trigger: GGGGCTGCCGGTAACCTTGCAGCACTCCCCGGTGCT...TGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449349.5
CDS-3UTR CCA 90 bp ACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGGCCCATTCCTCAACCTaGACAGATGGACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: TRHRLARERSKASWLQIQAHSST*TDGPLL
Trigger: GAGAAGTGGTCCATCTGTCCAGGTTGAGGAATGGGC...CTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp AGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGGCCCATTCCTCAACCTaGACAGATGGACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: RHRLARERSKASWLQIQLAHSST*TDGPLL
Trigger: GAGAAGTGGTCCATCTGTCCAGGTTGAGGAATGGGC...CAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGACCGGCAGCCCCTGTTaGCACAACCACCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVTGSPC*HNHLHQ
Trigger: CTGGTGGAGGTGGTTGTGCCAACAGGGGCTGCCGGT...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp ACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTGAGAAGTCTCCCTGCTaGACAGTCCTGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: TSQGTEQSQLAPDPAEQPEKSPC*TVLWMM
Trigger: CATCATCCACAGGACTGTCCAGCAGGGAGACTTCTC...AGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTAGGGCTCTTGTCACCTaGCTGTCAGAGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: GVLNPWSHGQSCAQASSFRALVT*LSEPES
Trigger: GCTCTCTGGCTCTGACAGCCAGGTGACAAGAGCCCT...AAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCCGGAGCAAAGCCAGCTaGCTCCAGATCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LRSSMVSRSISIQLSPLRRSKAS*LQIQLS
Trigger: GCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCG...GCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp TCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGCCACCTTCACAGGTCTaGGGTCCTAAACCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SRKPPNLRLMGRVHKAAQPPSQV*GPKPLE
Trigger: CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGG...CTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGACGGCCACCGCTGAGTaGGGGCACAGCAAGTACTGG +
Preference number: 4 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVTATAE*GHSKYW
Trigger: CCAGTACTTGCTGTGCCCCCACTCAGCGGTGGCCGT...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR CCA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGCCCTCTGTCCAACTGTaGGAGCTCCATGCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKPSVQL*ELHAPH
Trigger: GTGAGGGGCATGGAGCTCCCACAGTTGGACAGAGGG...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449349.5
3UTR CAA 72 bp AGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RSSMVSRSISIQ*SPLRIRVQRVS
Trigger: GGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp AGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAATGGACCACTTCTCTGTaGCGGAATCTGCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SLREGGELLPPSQVWGPKWTTSL*RNLLKA
Trigger: AGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCA...TTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp GCAGCCTCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCATGGACCACTTCTCTGTaGCGGAATCTGCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AASRKPPNLRLMGRVHKAWTTSL*RNLLKA
Trigger: AGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCA...TGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp TCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGTTCCTACAACCACAGTaGCGTGCTTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSCHLSASGCSVSPCAPGFLQPQ*RASPSS
Trigger: AGAAGAGGGAGAAGCACGTCACTGTGGTTGTAGGAA...CCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp GAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACCATGTTCTTTGCCCCTTaGACACTCTCAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ERSKASWLQIQLSSLPETMFFAP*TLSMAA
Trigger: TGCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACAT...GGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCGGCAGGCCTATCTTTTaGGCAATGTACCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PKHQHPVVTSPHQGAACLGRPIF*AMYPAA
Trigger: TGCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCC...GAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR TCA 90 bp TTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGTTTCAAACTGCTCCATaGGGGCTCTTGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: FAGPETFTTAQTLLHGPGFQTAP*GLLSPG
Trigger: GCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAA...CCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GCAGCCTCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCATTTCAAACTGCTCCATaGGGGCTCTTGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: AASRKPPNLRLMGRVHKAFQTAP*GLLSPG
Trigger: GCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAA...TGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATGAGGTGTTGAGGGCATaGCTCCTCCACTGTCGGCTA +
Preference number: 4 (lower is better)
Translates to: PPNLRLMGRVHKAAQKVHEVLRA*LLHCRL
Trigger: TAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTC...ATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGCTACTGGGAGGTGTTaGGGGCATGACTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GPQWCPEASASSCHLSASATGRC*GHDSST
Trigger: AGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAGC...TGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp TGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGACATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: CHLSASGCSVSPCAPGLRHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...TCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp GTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGGGCTCCAGATCCAGCTaGGCAGCCTCCCGGAAACCT +
Preference number: 4 (lower is better)
Translates to: VSPVPKPLLLQALKLSLQGSRSS*AASRKP
Trigger: AGGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCC...CTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATCTTCAGGGTGGAAGCCTCTaGCAAGGTGGGCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: PNLRLMGRVHKAAQKVHLQGGSL*QGGPEP
Trigger: AGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTG...AAGATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp CAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTGAGGCCCCCGTCAGGTaGATAGCCAGAGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QSCAQASSFAGPETFTTAEAPVR*IAREEG
Trigger: GCCCTCTTCTCTGGCTATGCACCTGACGGGGGCCTC...AGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GCAGCCTCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCATATGTGACGCCATaGCACAGCTCCAACACGTTC +
Preference number: 4 (lower is better)
Translates to: AASRKPPNLRLMGRVHKAAYVTP*HSSNTF
Trigger: GAACGTGTTGGAGCTGTGGCATGGCGTCACATATGC...TGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCTTCTCCAGGAAGTACTaGAGGAACTGTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LARERSKASWLQIQLSSLFSRKY*RNCVVQ
Trigger: CTGCACAACACAGTTCCTGCAGTACTTCCTGGAGAA...GAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACACATGTACGTTCTaGTTCAGCACCGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: QGTEQSQLAPDPAEQPPGNTCTF*FSTVVI
Trigger: GATGACAACGGTGCTGAAGCAGAACGTACATGTGTT...TCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATGTCATTGCGGTTCACTaGCACGACCAGACGGATGGG +
Preference number: 4 (lower is better)
Translates to: PPNLRLMGRVHKAAQKVHVIAVH*HDQTDG
Trigger: CCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGAC...ATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATTGGGTCCTTTCAAACTaGTCCATGAGGGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: GDQAQTSQGTEQSQLAPDWVLSN*SMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCA...ATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATTGGGTCCTTTCAAACTaGTCCATGAGGGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: VTSPHQGAACLLVLQGYDWVLSN*SMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCA...ATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR GCA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGTTCCGGGAACTTGGCTaGAGAGGCAGGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTFRELG*RGRGEA
Trigger: TGCCTCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAA...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCC +
Preference number: 4 (lower is better)
Translates to: PLSAKVLNGVPKHQHPVVQRVSL*SRATIS
Trigger: GGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG...GACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp CCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCCTCTCCGCATCAGGGTaGAGCGTGTCTCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PLSAKVLNGVPKHQHPVVLSASG*SVSPCA
Trigger: AGCACAAGGAGACACGCTGCACCCTGATGCGGAGAG...GACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp ATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGCCATGGTCAGTCCTGTaGCCAAGCCTCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: IQLSPLRIRVQRVSLCSRPWSVL*PSLFFC
Trigger: GCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGG...CCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp GGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGTGAAGGTGGTGAGCTaGTCCCACCTTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: GVLNPWSHGQSCAQASSFVKVVS*SHLHRS
Trigger: AGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCAC...AAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp ACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGAGAACATACAAAGCCTaGGTGAAGGTGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TRHRLARERSKASWLQIQRTYKA*VKVVSC
Trigger: GCAGCTCACCACCTTCACGCAGGCTTTGTATGTTCT...CTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GCATTTTATTCCAGGGATTCCCAACATGTGAGCAGGGTGGAAGCCTCTGACAAGGGCAGCACCGGGGAGTaGTGGGCTGCTGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: AFYSRDSQHVSRVEASDKGSTGE*WAAACL
Trigger: TAGACAGGCAGCAGCCCAGCACTCCCCGGTGCTGCC...CTTGTCAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCCTGGAATAAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR CCA 90 bp GTCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCCCCTCTGTCCAACTGTaGGAGCTCTTCAGGCATAAA +
Preference number: 4 (lower is better)
Translates to: VWGPKPLEPWSVLCPSLFPSVQL*ELFRHK
Trigger: TTTATGCCTGAAGAGCTCCCACAGTTGGACAGAGGG...GAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp TGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGCTGGACAGTCCTGTaGATGATGTCATTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: CVKVVSCSHLHRSGVLNPCWTVL*MMSLRF
Trigger: GAACCGCAATGACATCATCCACAGGACTGTCCAGCA...GGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR CCA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAGAGAAGTCTCCCTGCTaGACAGTCCTGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGEKSPC*TVLWMM
Trigger: CATCATCCACAGGACTGTCCAGCAGGGAGACTTCTC...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CTACTGGGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATAGGGCTCTTGTCACCTaGCTGTCAGAGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LLGGVEGMTPPLSAKVLNRALVT*LSEPES
Trigger: GCTCTCTGGCTCTGACAGCCAGGTGACAAGAGCCCT...ATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CCA 90 bp CCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PVVTSPHQGAACLLVLQGGRFTL*VLSNCS
Trigger: GGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCC...GCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CCA 90 bp GGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATTGCTGTGCAGTTCCTTaGGCAGATTCACACTTTGGG +
Preference number: 4 (lower is better)
Translates to: GDQAQTSQGTEQSQLAPDCCAVP*ADSHFG
Trigger: CCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCA...ATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCTCACGCTCCCTCTTCTaGGCCCACAGTTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PLSAKVLNGVPKHQHPVVSRSLF*AHSFQG
Trigger: GCCTTGGAAACTGTGGGCCCAGAAGAGGGAGCGTGA...GACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS-3UTR CCA 90 bp TCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTGCAAACTGCTCCTCCTaGTTGGAGGCCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SAKVLNGVPKHQHPVVTSANCSS*LEASSA
Trigger: GGCTGAGCTGGCCTCCAACCAGGAGGAGCAGTTTGC...AGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS-3UTR CCA 90 bp GCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCAAGCACCGGGGAGTGCTaGCAAACTGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AMVSPVPKPLLLQALKLSSTGEC*QTAPPG
Trigger: ACCAGGAGGAGCAGTTTGCCAGCACTCCCCGGTGCT...TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS-3UTR CCA 90 bp CCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCCAGCTTCCGGGAACTTaGCTGCAGAGGCAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: PKPLLLQALKLSLQLRHCQLPGT*LQRQGR
Trigger: TCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTG...GCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCAAACCCCTGGAGCCATaGTCAGTCCTGTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: RLRSSMVSRSISIQLSPLKPLEP*SVLCPS
Trigger: GCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTT...GAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp CGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCGGGGTCCTAAACCCCTaGAGCCATGGTCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RLRSSMVSRSISIQLSPLGVLNP*SHGQSC
Trigger: ACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC...GAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp GTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGCCACCTTCACAGGTCTaGGGTCCTAAACCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLNGVPKHQHPVVTSPHQPPSQV*GPKPLE
Trigger: CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGG...CTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
CDS-3UTR CCA 90 bp CTGGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGAAGCCTCTGACAAGGTaGGCCAGAACCTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: LVTRHRLARERSKASWLQKPLTR*ARTFGF
Trigger: AAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTT...CTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp GGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTCGGCAAACACAGTCTTaGTCGGCTCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GVLNPWSHGQSCAQASSFRQTQS*SAHRAH
Trigger: ATGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCG...AAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCGGCAAACACAGTCTTaGTCGGCTCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LNPWSHGQSCAQASSFAGRQTQS*SAHRAH
Trigger: ATGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCG...GCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGACCCGGGACCAGTTaGTCGAATTCAGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: GPQWCPEASASSCHLSASGPGTS*SNSGSS
Trigger: TGATGAGCCTGAATTCGATCAACTGGTCCCGGGTCC...TGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp GCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGGGACCCGGGACCAGTTaGTCGAATTCAGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: AKVLNGVPKHQHPVVTSPGPGTS*SNSGSS
Trigger: TGATGAGCCTGAATTCGATCAACTGGTCCCGGGTCC...CGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp AGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGGCGGCAGGCCTATCTTTTaGGCAATGTACCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RVEASDKVGQNLWIWFGGGRPIF*AMYPAA
Trigger: TGCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCC...GCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR TCA 90 bp ATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCGGACAGTCCTGTGGATaGTGTCATTGCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: ISIQLSPLRIRVQRVSLCGQSCG*CHCGSL
Trigger: CAGTGAACCGCAATGACATCATCCACAGGACTGTCC...GCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR TCA 90 bp TCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGGGACAGTCCTGTGGATaGTGTCATTGCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: SRKPPNLRLMGRVHKAAQGQSCG*CHCGSL
Trigger: CAGTGAACCGCAATGACATCATCCACAGGACTGTCC...CTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCGCTACTGGGAGGTGTTaGGGGCATGACTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SHGQSCAQASSFAGPETFATGRC*GHDSST
Trigger: AGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAGC...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCAGCTACTGGGAGGTGTTaGGGGCATGACTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: AMVSPVPKPLLLQALKLSATGRC*GHDSST
Trigger: AGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAGC...TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: SLREGGELLPPSQVWGPKHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...TTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp TCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCTTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: SPHQGAACLLVLQGYDLRFFCRP*NFHYSS
Trigger: TGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAA...GCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGCAGGGTGGAAGCCTCTaGCAAGGTGGGCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTQGGSL*QGGPEP
Trigger: AGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTG...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp CCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATCTTGGGATTCCCAACATGTaGGCAGGGTGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PNLRLMGRVHKAAQKVHLGIPNM*AGWKPL
Trigger: CAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCC...AAGATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp GCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGCCCATGGTCTGGGTaGTGGCTTCATCCGACACTG +
Preference number: 4 (lower is better)
Translates to: ASSFAGPETFTTAQTLLHGPWSG*WLHPTL
Trigger: CAGTGTCGGATGAAGCCATCACCCAGACCATGGGCC...GTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR TCA 90 bp AGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGGCCGCTCCATCACACTaGACAAGCATTTTATTCCAG +
Preference number: 4 (lower is better)
Translates to: RHRLARERSKASWLQIQLAAPSH*TSILFQ
Trigger: CTGGAATAAAATGCTTGTTCAGTGTGATGGAGCGGC...CAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000377254.7
CDS-3UTR GCA 90 bp GCATTTTATTCCAGGGATTCCCAACATGTGAGCAGGGTGGAAGCCTCTGACAAGGAGGCCCCCGTCAGGTaGATAGCCAGAGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: AFYSRDSQHVSRVEASDKEAPVR*IAREEG
Trigger: GCCCTCTTCTCTGGCTATGCACCTGACGGGGGCCTC...CTTGTCAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCCTGGAATAAAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000674334.2
CDS-3UTR GCA 90 bp GAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGGGACAGGTCCTTAAATaGATATGTGACGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: EGGELLPPSQVWGPKPLEGQVLK*ICDAMP
Trigger: TGGCATGGCGTCACATATGCATTTAAGGACCTGTCC...CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGGGACAGGTCCTTAAATaGATATGTGACGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: GVPKHQHPVVTSPHQGAAGQVLK*ICDAMP
Trigger: TGGCATGGCGTCACATATGCATTTAAGGACCTGTCC...CGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp GAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGTTCTCCAGGAAGTACTaGAGGAACTGTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: EGGELLPPSQVWGPKPLEFSRKY*RNCVVQ
Trigger: CTGCACAACACAGTTCCTGCAGTACTTCCTGGAGAA...CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp TCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCAACACATGTACGTTCTaGTTCAGCACCGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: SPHQGAACLLVLQGYDLRNTCTF*FSTVVI
Trigger: GATGACAACGGTGCTGAAGCAGAACGTACATGTGTT...GCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp TCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCAGCGTGTCTCCTTGTaGTCCAGGGCTACGATCTCC +
Preference number: 4 (lower is better)
Translates to: SAKVLNGVPKHQHPVVTSQRVSL*SRATIS
Trigger: GGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTG...AGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp GATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCCAGCTCAGACACTGCTaGACGGGCCGGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DLVWGPKSTKAQRTYKACQLRHC*TGRGGR
Trigger: CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTG...GCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCCATGGTCAGTCCTGTaGCCAAGCCTCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GMTPPLSAKVLNGVPKHQPWSVL*PSLFFC
Trigger: GCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGG...CTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGAAGGTGGTGAGCTaGTCCCACCTTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKVKVVS*SHLHRS
Trigger: AGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCAC...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp TCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGGGGGAGTGCTTGCTGTaGAGTTCCTTGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: SMVSRSISIQLSPLRIRVGECLL*SSLGRF
Trigger: GAATCTGCCCAAGGAACTGCACAGCAAGCACTCCCC...CACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CCA 90 bp TCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGCTCAAAGTTGACCCGTaGGGCTACGCCCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SCAQASSFAGPETFTTAQLKVDP*GYAPGA
Trigger: AGCACCAGGGGCGTAGCCCCACGGGTCAACTTTGAG...CTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GTCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCATGTGTGTCCAAGGATaGCGTACACTGGAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: VWGPKPLEPWSVLCPSLFMCVQG*RTLEVS
Trigger: GCTTACTTCCAGTGTACGCCATCCTTGGACACACAT...GAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGATGTGTGTCCAAGGATaGCGTACACTGGAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: REGGELLPPSQVWGPKPLMCVQG*RTLEVS
Trigger: GCTTACTTCCAGTGTACGCCATCCTTGGACACACAT...CAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp AATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCACCACGACCAGACGGATaGGCAGGCCTATCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: NGVPKHQHPVVTSPHQGAPRPDG*AGLSFE
Trigger: CTCAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGG...TGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CCA 90 bp CGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCCACGACCAGACGGATaGGCAGGCCTATCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RLRSSMVSRSISIQLSPLPRPDG*AGLSFE
Trigger: CTCAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGG...GAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CCA 90 bp CCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCTGCTGGACAGTCCTGTaGATGATGTCATTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PKHQHPVVTSPHQGAACLCWTVL*MMSLRF
Trigger: GAACCGCAATGACATCATCCACAGGACTGTCCAGCA...GAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CCA 90 bp AGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: RERSKASWLQIQLSSLPEEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...TTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCGGAGCAAAGCCAGCTaGCTCCAGATCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VSPVPKPLLLQALKLSLQRSKAS*LQIQLS
Trigger: GCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCG...CTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCCCACCTTCACAGGTCTaGGGTCCTAAACCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SHGQSCAQASSFAGPETFPPSQV*GPKPLE
Trigger: CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGG...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGAAGCCTCTGACAAGGTaGGCCAGAACCTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: REGGELLPPSQVWGPKPLKPLTR*ARTFGF
Trigger: AAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTT...CAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp GCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGAAGCCTCTGACAAGGTaGGCCAGAACCTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: AQTSQGTEQSQLAPDPAEKPLTR*ARTFGF
Trigger: AAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTT...CTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGAGCACCGGGGAGTGCTaGGCTGCTGCCTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTSTGEC*AAACLS
Trigger: AGATAGACAGGCAGCAGCCCAGCACTCCCCGGTGCT...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR TCA 90 bp GTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGTGGACCACTTCTCTGTaGCGGAATCTGCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: VLNGVPKHQHPVVTSPHQWTTSL*RNLLKA
Trigger: AGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCA...CTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp TCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTATGTTCTTTGCCCCTTaGACACTCTCAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGVLNPWSHGQSCAQASSMFFAP*TLSMAA
Trigger: TGCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACAT...AGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCACGGCAAACACAGTCTTaGTCGGCTCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VLNPWSHGQSCAQASSFARQTQS*SAHRAH
Trigger: ATGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCG...TGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp TCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGGAGGTGTTGAGGGCATaGCTCCTCCACTGTCGGCTA +
Preference number: 4 (lower is better)
Translates to: SSFAGPETFTTAQTLLHGEVLRA*LLHCRL
Trigger: TAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTC...CCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp TTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGGTTCACGGCCACCGCTaGGTGGGGGCACAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LVWGPKSTKAQRTYKACVVHGHR*VGAQQV
Trigger: TACTTGCTGTGCCCCCACTCAGCGGTGGCCGTGAAC...CACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR GCA 90 bp TCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGGCATATGTGACGCCATaGCACAGCTCCAACACGTTC +
Preference number: 4 (lower is better)
Translates to: SMVSRSISIQLSPLRIRVAYVTP*HSSNTF
Trigger: GAACGTGTTGGAGCTGTGGCATGGCGTCACATATGC...CACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp GCAGCCTCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGGACAGGTCCTTAAATaGATATGTGACGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: AASRKPPNLRLMGRVHKAGQVLK*ICDAMP
Trigger: TGGCATGGCGTCACATATGCATTTAAGGACCTGTCC...TGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAGGACAGGTCCTTAAATaGATATGTGACGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: PWSHGQSCAQASSFAGPEGQVLK*ICDAMP
Trigger: TGGCATGGCGTCACATATGCATTTAAGGACCTGTCC...TTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GCAGCCTCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCATTCTCCAGGAAGTACTaGAGGAACTGTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: AASRKPPNLRLMGRVHKAFSRKY*RNCVVQ
Trigger: CTGCACAACACAGTTCCTGCAGTACTTCCTGGAGAA...TGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp ACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTAACACATGTACGTTCTaGTTCAGCACCGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: TSQGTEQSQLAPDPAEQPNTCTF*FSTVVI
Trigger: GATGACAACGGTGCTGAAGCAGAACGTACATGTGTT...AGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCAACACATGTACGTTCTaGTTCAGCACCGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: RLARERSKASWLQIQLSSNTCTF*FSTVVI
Trigger: GATGACAACGGTGCTGAAGCAGAACGTACATGTGTT...GCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp TCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGGTCATTGCGGTTCACTaGCACGACCAGACGGATGGG +
Preference number: 4 (lower is better)
Translates to: SSFAGPETFTTAQTLLHGVIAVH*HDQTDG
Trigger: CCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGAC...CCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGAGAGAGAAGTCTCCCTaGTGGACAGTCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKREKSP*WTVLWM
Trigger: CATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCT...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAAGAGAGAAGTCTCCCTaGTGGACAGTCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: NGVPKHQHPVVTSPHQGAREKSP*WTVLWM
Trigger: CATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCT...TGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR GCA 90 bp GGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTTGGGTCCTTTCAAACTaGTCCATGAGGGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: GVLNPWSHGQSCAQASSFWVLSN*SMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCA...AAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCGTGAAGGTGGTGAGCTaGTCCCACCTTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: SHGQSCAQASSFAGPETFVKVVS*SHLHRS
Trigger: AGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCAC...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp CCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGAGAACATACAAAGCCTaGGTGAAGGTGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PKPLEPWSVLCPSLFFCRRTYKA*VKVVSC
Trigger: GCAGCTCACCACCTTCACGCAGGCTTTGTATGTTCT...CCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGGCAGCACCGGGGAGTaGTGGGCTGCTGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: DLVWGPKSTKAQRTYKACGSTGE*WAAACL
Trigger: TAGACAGGCAGCAGCCCAGCACTCCCCGGTGCTGCC...GCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR CCA 90 bp CTACTGGGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGCCCATTCCTCAACCTaGACAGATGGACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LLGGVEGMTPPLSAKVLNAHSST*TDGPLL
Trigger: GAGAAGTGGTCCATCTGTCCAGGTTGAGGAATGGGC...ATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAATGTGTGTCCAAGGATaGCGTACACTGGAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGMCVQG*RTLEVS
Trigger: GCTTACTTCCAGTGTACGCCATCCTTGGACACACAT...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCCCACGACCAGACGGATaGGCAGGCCTATCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SHGQSCAQASSFAGPETFPRPDG*AGLSFE
Trigger: CTCAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGG...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGTGCTGGACAGTCCTGTaGATGATGTCATTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PKPLEPWSVLCPSLFFCRCWTVL*MMSLRF
Trigger: GAACCGCAATGACATCATCCACAGGACTGTCCAGCA...CCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCGAGAAGTCTCCCTGCTaGACAGTCCTGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: RLRSSMVSRSISIQLSPLEKSPC*TVLWMM
Trigger: CATCATCCACAGGACTGTCCAGCAGGGAGACTTCTC...GAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CCA 90 bp CCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATGAGAAGTCTCCCTGCTaGACAGTCCTGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: PPNLRLMGRVHKAAQKVHEKSPC*TVLWMM
Trigger: CATCATCCACAGGACTGTCCAGCAGGGAGACTTCTC...ATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp TCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGAGGGCTCTTGTCACCTaGCTGTCAGAGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SCAQASSFAGPETFTTAQRALVT*LSEPES
Trigger: GCTCTCTGGCTCTGACAGCCAGGTGACAAGAGCCCT...CTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACAGGGCTCTTGTCACCTaGCTGTCAGAGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ASSFAGPETFTTAQTLLHRALVT*LSEPES
Trigger: GCTCTCTGGCTCTGACAGCCAGGTGACAAGAGCCCT...GTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PWSHGQSCAQASSFAGPEGRFTL*VLSNCS
Trigger: GGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCC...TTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp AAAGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: KACVKVVSCSHLHRSGVLGRFTL*VLSNCS
Trigger: GGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCC...TAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR CCA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGGRFTL*VLSNCS
Trigger: GGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCC...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACAAACCCCTGGAGCCATaGTCAGTCCTGTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: ASSFAGPETFTTAQTLLHKPLEP*SVLCPS
Trigger: GCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTT...GTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACACCACCTTCACAGGTCTaGGGTCCTAAACCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQSCAQASSFAGPETFTTPPSQV*GPKPLE
Trigger: CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGG...TGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CTGGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGCAGAACCTTTGGATTTaGTTTGGGGGCCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: LVTRHRLARERSKASWLQQNLWI*FGGQNQ
Trigger: TTGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTG...CTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp GTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGAAGACGGCCACCGCTGAGTaGGGGCACAGCAAGTACTGG +
Preference number: 4 (lower is better)
Translates to: VWGPKSTKAQRTYKACVKTATAE*GHSKYW
Trigger: CCAGTACTTGCTGTGCCCCCACTCAGCGGTGGCCGT...CTTCACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
3UTR CAA 72 bp GGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTaGCAGGCCCTGAAACTTTCACTACAGCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: GAMVSPVPKPLL*QALKLSLQLRH
Trigger: GTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAATCAGATTGTGCTTCTTaGCAAAAGCCACATCGGCAA +
Preference number: 4 (lower is better)
Translates to: SLREGGELLPPSQVWGPKSDCAS*QKPHRQ
Trigger: TTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGA...TTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGATCAGATTGTGCTTCTTaGCAAAAGCCACATCGGCAA +
Preference number: 4 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGSDCAS*QKPHRQ
Trigger: TTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGA...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCTTTCAAACTGCTCCATaGGGGCTCTTGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SHGQSCAQASSFAGPETFFQTAP*GLLSPG
Trigger: GCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAA...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGGAGGTGTTGAGGGCATaGCTCCTCCACTGTCGGCTA +
Preference number: 4 (lower is better)
Translates to: QASSFAGPETFTTAQTLLEVLRA*LLHCRL
Trigger: TAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTC...CAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCACATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: NGVPKHQHPVVTSPHQGAHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...TGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp CTACTGGGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATCATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: LLGGVEGMTPPLSAKVLNHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...ATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp ATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCGGACAGGTCCTTAAATaGATATGTGACGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: ISIQLSPLRIRVQRVSLCGQVLK*ICDAMP
Trigger: TGGCATGGCGTCACATATGCATTTAAGGACCTGTCC...GCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGAGAGAGAAGTCTCCCTaGTGGACAGTCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVREKSP*WTVLWM
Trigger: CATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCT...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCTGGGTCCTTTCAAACTaGTCCATGAGGGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: PLSAKVLNGVPKHQHPVVWVLSN*SMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCA...GACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR GCA 90 bp GATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCTTCCGGGAACTTGGCTaGAGAGGCAGGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: DLVWGPKSTKAQRTYKACFRELG*RGRGEA
Trigger: TGCCTCGCCCCTGCCTCTGCAGCCAAGTTCCCGGAA...GCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GCATTTTATTCCAGGGATTCCCAACATGTGAGCAGGGTGGAAGCCTCTGACAAGCTCTCCGCATCAGGGTaGAGCGTGTCTCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AFYSRDSQHVSRVEASDKLSASG*SVSPCA
Trigger: AGCACAAGGAGACACGCTGCACCCTGATGCGGAGAG...CTTGTCAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCCTGGAATAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp AAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCCTCTCCGCATCAGGGTaGAGCGTGTCTCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: KPLLLQALKLSLQLRHCCLSASG*SVSPCA
Trigger: AGCACAAGGAGACACGCTGCACCCTGATGCGGAGAG...GCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCCATGGTCAGTCCTGTaGCCAAGCCTCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVPWSVL*PSLFFC
Trigger: GCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGG...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGTGAAGGTGGTGAGCTaGTCCCACCTTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: GQSCAQASSFAGPETFTTVKVVS*SHLHRS
Trigger: AGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCAC...TGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAAGAACATACAAAGCCTaGGTGAAGGTGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VLNPWSHGQSCAQASSFARTYKA*VKVVSC
Trigger: GCAGCTCACCACCTTCACGCAGGCTTTGTATGTTCT...TGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp GTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGAAGCTCAAAGTTGACCCGTaGGGCTACGCCCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VWGPKSTKAQRTYKACVKLKVDP*GYAPGA
Trigger: AGCACCAGGGGCGTAGCCCCACGGGTCAACTTTGAG...CTTCACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000674334.2
CDS-3UTR CCA 90 bp GCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCAGCCCATTCCTCAACCTaGACAGATGGACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: AMVSPVPKPLLLQALKLSAHSST*TDGPLL
Trigger: GAGAAGTGGTCCATCTGTCCAGGTTGAGGAATGGGC...TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp ATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCATGTGTGTCCAAGGATaGCGTACACTGGAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: ISIQLSPLRIRVQRVSLCMCVQG*RTLEVS
Trigger: GCTTACTTCCAGTGTACGCCATCCTTGGACACACAT...GCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp GTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCCACGACCAGACGGATaGGCAGGCCTATCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: VSPVPKPLLLQALKLSLQPRPDG*AGLSFE
Trigger: CTCAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGG...CTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCGAGAAGTCTCCCTGCTaGACAGTCCTGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: LLLQALKLSLQLRHCCTGEKSPC*TVLWMM
Trigger: CATCATCCACAGGACTGTCCAGCAGGGAGACTTCTC...GCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp AGCAGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGTGCTGTGCAGTTCCTTaGGCAGATTCACACTTTGGG +
Preference number: 4 (lower is better)
Translates to: SRVEASDKVGQNLWIWFGCCAVP*ADSHFG
Trigger: CCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCA...CCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR CCA 90 bp CAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCCACCTTCACAGGTCTaGGGTCCTAAACCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QASSFAGPETFTTAQTLLPPSQV*GPKPLE
Trigger: CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGG...CAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp AGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCCTTTGGATTTGGTTTaGGGGCCAAAATCAACTAAG +
Preference number: 4 (lower is better)
Translates to: RLARERSKASWLQIQLSSPLDLV*GPKSTK
Trigger: CTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGG...GCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp GCATTTTATTCCAGGGATTCCCAACATGTGAGCAGGGTGGAAGCCTCTGACAAGGGGCACAGCAAGTACTaGTTCTCATCCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AFYSRDSQHVSRVEASDKGHSKY*FSSQQR
Trigger: CCGCTGCTGGGATGAGAACCAGTACTTGCTGTGCCC...CTTGTCAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCCTGGAATAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR TCA 90 bp TCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGTGTGACGGAATCTGCTaGAGGCTCGGTCGATCAGAT +
Preference number: 4 (lower is better)
Translates to: SCAQASSFAGPETFTTAQCDGIC*RLGRSD
Trigger: ATCTGATCGACCGAGCCTTCAGCAGATTCCGTCACA...CTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGTGGACCACTTCTCTGTaGCGGAATCTGCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTWTTSL*RNLLKA
Trigger: AGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCA...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCTTCCTACAACCACAGTaGCGTGCTTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLQALKLSLQLRHCCTGFLQPQ*RASPSS
Trigger: AGAAGAGGGAGAAGCACGTCACTGTGGTTGTAGGAA...GCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAATGTTCTTTGCCCCTTaGACACTCTCAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VLNPWSHGQSCAQASSFAMFFAP*TLSMAA
Trigger: TGCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACAT...TGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp TTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGGCTACTGGGAGGTGTTaGGGGCATGACTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LVWGPKSTKAQRTYKACVATGRC*GHDSST
Trigger: AGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAGC...CACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp GATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCCAGGGTGGAAGCCTCTaGCAAGGTGGGCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: DLVWGPKSTKAQRTYKACQGGSL*QGGPEP
Trigger: AGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTG...GCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGCATATGTGACGCCATaGCACAGCTCCAACACGTTC +
Preference number: 4 (lower is better)
Translates to: ASSFAGPETFTTAQTLLHAYVTP*HSSNTF
Trigger: GAACGTGTTGGAGCTGTGGCATGGCGTCACATATGC...GTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGTTCTCCAGGAAGTACTaGAGGAACTGTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: AKVLNGVPKHQHPVVTSPFSRKY*RNCVVQ
Trigger: CTGCACAACACAGTTCCTGCAGTACTTCCTGGAGAA...CGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp CTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCTTCTCCAGGAAGTACTaGAGGAACTGTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LRSSMVSRSISIQLSPLRFSRKY*RNCVVQ
Trigger: CTGCACAACACAGTTCCTGCAGTACTTCCTGGAGAA...GCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp AGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAAAGGCTCATCAGATTGTaGTTCTTGACAAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: SLREGGELLPPSQVWGPKRLIRL*FLTKAT
Trigger: TGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCT...TTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp TTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAGGCTCATCAGATTGTaGTTCTTGACAAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: FAGPETFTTAQTLLHGPGRLIRL*FLTKAT
Trigger: TGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCT...CCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp TCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTAGGCTCATCAGATTGTaGTTCTTGACAAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: SGVLNPWSHGQSCAQASSRLIRL*FLTKAT
Trigger: TGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCT...AGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AAAGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAGGCTCATCAGATTGTaGTTCTTGACAAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: KACVKVVSCSHLHRSGVLRLIRL*FLTKAT
Trigger: TGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCT...TAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAAGAGAGAAGTCTCCCTaGTGGACAGTCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: GQSCAQASSFAGPETFTTREKSP*WTVLWM
Trigger: CATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCT...TGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACCATGGTCAGTCCTGTaGCCAAGCCTCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PVPKPLLLQALKLSLQLRPWSVL*PSLFFC
Trigger: GCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGG...TCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp TCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCTGCCTCTGAAAGCTTaGTGTGCAGTTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SSFAGPETFTTAQTLLHGLPLKA*CAVPWA
Trigger: TGCCCAAGGAACTGCACAGCAAGCTTTCAGAGGCAG...CCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR CCA 90 bp GTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGGCCCATTCCTCAACCTaGACAGATGGACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: VSPVPKPLLLQALKLSLQAHSST*TDGPLL
Trigger: GAGAAGTGGTCCATCTGTCCAGGTTGAGGAATGGGC...CTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp TCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTTGCTGGACAGTCCTGTaGATGATGTCATTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: SAKVLNGVPKHQHPVVTSCWTVL*MMSLRF
Trigger: GAACCGCAATGACATCATCCACAGGACTGTCCAGCA...AGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CCA 90 bp CCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATCTTTGCTGTGCAGTTCCTTaGGCAGATTCACACTTTGGG +
Preference number: 4 (lower is better)
Translates to: PNLRLMGRVHKAAQKVHLCCAVP*ADSHFG
Trigger: CCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCA...AAGATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp CTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LNPWSHGQSCAQASSFAGEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...GCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp TTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGGGGGTCCTAAACCCCTaGAGCCATGGTCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LVWGPKSTKAQRTYKACVGVLNP*SHGQSC
Trigger: ACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC...CACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCCAGAACCTTTGGATTTaGTTTGGGGGCCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: RSISIQLSPLRIRVQRVSQNLWI*FGGQNQ
Trigger: TTGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTG...GGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
CDS-3UTR CCA 90 bp CTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCAAGCCTCTGACAAGGTaGGCCAGAACCTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: LRSSMVSRSISIQLSPLRKPLTR*ARTFGF
Trigger: AAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTT...GCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
CDS-3UTR TCA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCATGTTCTTTGCCCCTTaGACACTCTCAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SHGQSCAQASSFAGPETFMFFAP*TLSMAA
Trigger: TGCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACAT...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCATCAGATTGTGCTTCTTaGCAAAAGCCACATCGGCAA +
Preference number: 4 (lower is better)
Translates to: NGVPKHQHPVVTSPHQGASDCAS*QKPHRQ
Trigger: TTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGA...TGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGTCAGATTGTGCTTCTTaGCAAAAGCCACATCGGCAA +
Preference number: 4 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKSDCAS*QKPHRQ
Trigger: TTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGA...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGGGACAGTCCTGTGGATaGTGTCATTGCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: QASSFAGPETFTTAQTLLGQSCG*CHCGSL
Trigger: CAGTGAACCGCAATGACATCATCCACAGGACTGTCC...CAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp ATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGGCTACTGGGAGGTGTTaGGGGCATGACTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: IWFGGQNQLRLREHTKPAATGRC*GHDSST
Trigger: AGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAGC...CGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp CAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCATCTTCCTGGGATCTaGAGCCTAAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: QSCAQASSFAGPETFTTAHLPGI*SLKKAT
Trigger: GGTGGCTTTCTTTAGGCTTCAGATCCCAGGAAGATG...AGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAAGAACATACAAAGCCTaGGTGAAGGTGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GQSCAQASSFAGPETFTTRTYKA*VKVVSC
Trigger: GCAGCTCACCACCTTCACGCAGGCTTTGTATGTTCT...TGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCATGTGTGTCCAAGGATaGCGTACACTGGAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: LLLQALKLSLQLRHCCTGMCVQG*RTLEVS
Trigger: GCTTACTTCCAGTGTACGCCATCCTTGGACACACAT...GCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCAATGTGTGTCCAAGGATaGCGTACACTGGAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: AMVSPVPKPLLLQALKLSMCVQG*RTLEVS
Trigger: GCTTACTTCCAGTGTACGCCATCCTTGGACACACAT...TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACTGCTGGACAGTCCTGTaGATGATGTCATTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: ASSFAGPETFTTAQTLLHCWTVL*MMSLRF
Trigger: GAACCGCAATGACATCATCCACAGGACTGTCCAGCA...GTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACTGCTGTGCAGTTCCTTaGGCAGATTCACACTTTGGG +
Preference number: 4 (lower is better)
Translates to: ASSFAGPETFTTAQTLLHCCAVP*ADSHFG
Trigger: CCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCA...GTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp GTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGTGCTGTGCAGTTCCTTaGGCAGATTCACACTTTGGG +
Preference number: 4 (lower is better)
Translates to: VSPVPKPLLLQALKLSLQCCAVP*ADSHFG
Trigger: CCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCA...CTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp AGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: RSSMVSRSISIQLSPLRIEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...GATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp AGCAGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SRVEASDKVGQNLWIWFGEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...CCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp GCAGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGCCTTTGGATTTGGTTTaGGGGCCAAAATCAACTAAG +
Preference number: 4 (lower is better)
Translates to: AGWKPLTRWARTFGFGLGPLDLV*GPKSTK
Trigger: CTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGG...CCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTTTGGATTTGGTTTaGGGGCCAAAATCAACTAAG +
Preference number: 4 (lower is better)
Translates to: LNPWSHGQSCAQASSFAGPLDLV*GPKSTK
Trigger: CTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGG...GCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp GGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCCTTTGGATTTGGTTTaGGGGCCAAAATCAACTAAG +
Preference number: 4 (lower is better)
Translates to: GMTPPLSAKVLNGVPKHQPLDLV*GPKSTK
Trigger: CTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGG...CTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
CDS-3UTR CCA 90 bp ATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGGGGCACAGCAAGTACTaGTTCTCATCCCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: IWFGGQNQLRLREHTKPAGHSKY*FSSQQR
Trigger: CCGCTGCTGGGATGAGAACCAGTACTTGCTGTGCCC...CGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR TCA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGATGTTCTTTGCCCCTTaGACACTCTCAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTMFFAP*TLSMAA
Trigger: TGCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACAT...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGTCAGATTGTGCTTCTTaGCAAAAGCCACATCGGCAA +
Preference number: 4 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVSDCAS*QKPHRQ
Trigger: TTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGA...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp GTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGAAGGGCAGGCCTATCTTTTaGGCAATGTACCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VWGPKSTKAQRTYKACVKGRPIF*AMYPAA
Trigger: TGCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCC...CTTCACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR TCA 90 bp AAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATTTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: KVLNGVPKHQHPVVTSPHFFCRP*NFHYSS
Trigger: TGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAA...ATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR TCA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGTTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVFFCRP*NFHYSS
Trigger: TGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAA...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGAGCCGCTCCATCACACTaGACAAGCATTTTATTCCAG +
Preference number: 4 (lower is better)
Translates to: PVPKPLLLQALKLSLQLRAAPSH*TSILFQ
Trigger: CTGGAATAAAATGCTTGTTCAGTGTGATGGAGCGGC...TCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000377254.7
CDS-3UTR GCA 90 bp CCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAAAATGTCCATGTTCTTTaGCCCTTGAACACTCTCAAT +
Preference number: 4 (lower is better)
Translates to: PGAMVSPVPKPLLLQALKNVHVL*PLNTLN
Trigger: ATTGAGAGTGTTCAAGGGGCAAAGAACATGGACATT...TTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCAACACATGTACGTTCTaGTTCAGCACCGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: LLLQALKLSLQLRHCCTGNTCTF*FSTVVI
Trigger: GATGACAACGGTGCTGAAGCAGAACGTACATGTGTT...GCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp CCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATAGGCTCATCAGATTGTaGTTCTTGACAAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: PPNLRLMGRVHKAAQKVHRLIRL*FLTKAT
Trigger: TGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCT...ATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp ATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: MTPPLSAKVLNGVPKHQHEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...ATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CCA 90 bp AATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCACCTTTGGATTTGGTTTaGGGGCCAAAATCAACTAAG +
Preference number: 4 (lower is better)
Translates to: NGVPKHQHPVVTSPHQGAPLDLV*GPKSTK
Trigger: CTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGG...TGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
CDS-3UTR CCA 90 bp GCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCAGAACCTTTGGATTTaGTTTGGGGGCCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: AKVLNGVPKHQHPVVTSPQNLWI*FGGQNQ
Trigger: TTGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTG...CGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
CDS-3UTR TCA 90 bp GTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGAAGTTCCTACAACCACAGTaGCGTGCTTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VWGPKSTKAQRTYKACVKFLQPQ*RASPSS
Trigger: AGAAGAGGGAGAAGCACGTCACTGTGGTTGTAGGAA...CTTCACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGTTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTFFCRP*NFHYSS
Trigger: TGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAA...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp CCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKPLLLQALKLSLQLRHCFFCRP*NFHYSS
Trigger: TGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAA...GCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp AATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAAATGTCCATGTTCTTTaGCCCTTGAACACTCTCAAT +
Preference number: 4 (lower is better)
Translates to: NGVPKHQHPVVTSPHQGANVHVL*PLNTLN
Trigger: ATTGAGAGTGTTCAAGGGGCAAAGAACATGGACATT...TGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp CTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCAATGTCCATGTTCTTTaGCCCTTGAACACTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LRSSMVSRSISIQLSPLRNVHVL*PLNTLN
Trigger: ATTGAGAGTGTTCAAGGGGCAAAGAACATGGACATT...GCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR GCA 90 bp GGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAAACACATGTACGTTCTaGTTCAGCACCGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: GQSCAQASSFAGPETFTTNTCTF*FSTVVI
Trigger: GATGACAACGGTGCTGAAGCAGAACGTACATGTGTT...TGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCAGAGAGAAGTCTCCCTaGTGGACAGTCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: DLVWGPKSTKAQRTYKACREKSP*WTVLWM
Trigger: CATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCT...GCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR GCA 90 bp GATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCCCATGGTCAGTCCTGTaGCCAAGCCTCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: DLVWGPKSTKAQRTYKACPWSVL*PSLFFC
Trigger: GCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGG...GCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp CAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: QASSFAGPETFTTAQTLLGRFTL*VLSNCS
Trigger: GGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCC...CAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp TGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACAAAGCCTCTGACAAGGTaGGCCAGAACCTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: CAQASSFAGPETFTTAQTKPLTR*ARTFGF
Trigger: AAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTT...TGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp CAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGTCAGATTGTGCTTCTTaGCAAAAGCCACATCGGCAA +
Preference number: 4 (lower is better)
Translates to: QASSFAGPETFTTAQTLLSDCAS*QKPHRQ
Trigger: TTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGA...CAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR TCA 90 bp TGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACATTCTTTTGCAGGCCCTaGAACTTTCACTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: CAQASSFAGPETFTTAQTFFCRP*NFHYSS
Trigger: TGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAA...TGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp GCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCAAATGTCCATGTTCTTTaGCCCTTGAACACTCTCAAT +
Preference number: 4 (lower is better)
Translates to: AMVSPVPKPLLLQALKLSNVHVL*PLNTLN
Trigger: ATTGAGAGTGTTCAAGGGGCAAAGAACATGGACATT...TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR GCA 90 bp ATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGAGAACATACAAAGCCTaGGTGAAGGTGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: IWFGGQNQLRLREHTKPARTYKA*VKVVSC
Trigger: GCAGCTCACCACCTTCACGCAGGCTTTGTATGTTCT...CGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp GCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACCAGAACCTTTGGATTTaGTTTGGGGGCCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: ASSFAGPETFTTAQTLLHQNLWI*FGGQNQ
Trigger: TTGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTG...GTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CCA 90 bp TCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCAGAACCTTTGGATTTaGTTTGGGGGCCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: SSFAGPETFTTAQTLLHGQNLWI*FGGQNQ
Trigger: TTGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTG...CCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR TCA 90 bp GATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCATGTTCTTTGCCCCTTaGACACTCTCAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DLVWGPKSTKAQRTYKACMFFAP*TLSMAA
Trigger: TGCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACAT...GCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp GCATTTTATTCCAGGGATTCCCAACATGTGAGCAGGGTGGAAGCCTCTGACAAGAGGCTCATCAGATTGTaGTTCTTGACAAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: AFYSRDSQHVSRVEASDKRLIRL*FLTKAT
Trigger: TGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCT...CTTGTCAGAGGCTTCCACCCTGCTCACATGTTGGGAATCCCTGGAATAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp TGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACAAATGTCCATGTTCTTTaGCCCTTGAACACTCTCAAT +
Preference number: 4 (lower is better)
Translates to: CAQASSFAGPETFTTAQTNVHVL*PLNTLN
Trigger: ATTGAGAGTGTTCAAGGGGCAAAGAACATGGACATT...TGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CCA 90 bp ATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGGAAGGTGCATCTTCCTaGGATCTGAAGCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: IWFGGQNQLRLREHTKPAEGASS*DLKPKE
Trigger: TTCTTTAGGCTTCAGATCCCAGGAAGATGCACCTTC...CGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR GCA 90 bp TTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGAATGTCCATGTTCTTTaGCCCTTGAACACTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LVWGPKSTKAQRTYKACVNVHVL*PLNTLN
Trigger: ATTGAGAGTGTTCAAGGGGCAAAGAACATGGACATT...CACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS CCA 90 bp GAGCGCCGGAACCAAAGGTTCCAGAAACGGGCGGGGCGACGGACGTaGGCCTGCGGGAATCAGGGCCGAACGGAGCCGCGAGAGCGTCCG +
Preference number: 5 (lower is better)
Translates to: ERRNQRFQKRAGRRT*ACGNQGRTEPRERP
Trigger: CGGACGCTCTCGCGGCTCCGTTCGGCCCTGATTCCCGCAGGCCCACGTCCGTCGCCCCGCCCGTTTCTGGAACCTTTGGTTCCGGCGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS GCA 90 bp CGGAACCAAAGGTTCCAGAAACGGGCGGGGCGACGGACGTGGGCCTaGGGGAATCAGGGCCGAACGGAGCCGCGAGAGCGTCCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: RNQRFQKRAGRRTWA*GNQGRTEPRERPEL
Trigger: GAGCTCCGGACGCTCTCGCGGCTCCGTTCGGCCCTGATTCCCGCAGGCCCACGTCCGTCGCCCCGCCCGTTTCTGGAACCTTTGGTTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS-3UTR CAA 90 bp CCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACAGCTTCCGGGAACTaGGCTGCAGAGGCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: PWSHGQSCAQASSFAGPETASGN*AAEAGA
Trigger: CGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTGT...TTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS CCA 90 bp GTCAGGTGCATAGCCAGAGAAGAGGGCCCCCTCAAAGTTGACCCGTaGGGCTACGCCCCTGGTGCTGACATACCACATGATCCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: VRCIAREEGPLKVDP*GYAPGADIPHDPGG
Trigger: GCCTCCAGGATCATGTGGTATGTCAGCACCAGGGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCCTCTTCTCTGGCTATGCACCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS-3UTR CAA 90 bp CGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCGGGAGTCTCAGGGGTCAGGCTGTGGATGATGTCATaGCGGTTCACTGCCACGACC +
Preference number: 5 (lower is better)
Translates to: RVSLCSRATISAGVSGVRLWMMS*RFTATT
Trigger: GGTCGTGGCAGTGAACCGCAATGACATCATCCACAG...CCTGACCCCTGAGACTCCCGCGGAGATCGTAGCCCTGGAGCACAAGGAGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS-3UTR CAA 90 bp TGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATC +
Preference number: 5 (lower is better)
Translates to: CVKVVSCSHLHRSGVLNPVQRVS*CSRATI
Trigger: GATCGTAGCCCTGGAGCACAAGGAGACACGCTGCAC...GGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp GAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACCGGTGGGCCAGAACCTTaGGATTTGGTTTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: ERSKASWLQIQLSSLPETGGPEP*DLVWGP
Trigger: TGGCCCCCAAACCAAATCCAAAGGTTCTGGCCCACC...GGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS TCA 90 bp CTGCTGCCTGTCTATCTGCTGGTAATGGTAGTTCACGGCCACCGCTaGGTGGGGGCACAGCAAGTACTGGTTCTCATCCCAGCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: LLPVYLLVMVVHGHR*VGAQQVLVLIPAAA
Trigger: GGCCGCTGCTGGGATGAGAACCAGTACTTGCTGTGCCCCCACTCAGCGGTGGCCGTGAACTACCATTACCAGCAGATAGACAGGCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS GCA 90 bp AGGCCCATGCCCCTCACGCAACAGGACTGTCCCTGTTCTGTCCAATaGCTTCCAGGGGCAGCATTCCCAGGCCAATTCAGCAAAGCGGTG +
Preference number: 5 (lower is better)
Translates to: RPMPLTQQDCPCSVQ*LPGAAFPGQFSKAV
Trigger: CACCGCTTTGCTGAATTGGCCTGGGAATGCTGCCCCTGGAAGGCATTGGACAGAACAGGGACAGTCCTGTTGCGTGAGGGGCATGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419759.5
CDS-3UTR CAA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGAGGGCCCCCTCAAAGTaGACCCGTGGGGCTACGCCC +
Preference number: 5 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVRAPSK*TRGATP
Trigger: GGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCCT...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAGGGAGGACTGCAGGAACTGTGTaGTGCAGGACAGGGACAGGT +
Preference number: 5 (lower is better)
Translates to: ALKLSLQLRHCCTGRGGRTAGTV*CRTGTG
Trigger: ACCTGTCCCTGTCCTGCACAACACAGTTCCTGCAGT...CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCTCGGCAAACACAGTCTaGATCGGCTCATCGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SQGTEQSQLAPDPAEQPPSANTV*IGSSSS
Trigger: TGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCGA...GGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGATCGGCAAACACAGTCTaGATCGGCTCATCGAGCTCA +
Preference number: 5 (lower is better)
Translates to: QGTEQSQLAPDPAEQPPGSANTV*IGSSSS
Trigger: TGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCGA...TCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCGGGCAGGCCTATCTTTaGAGCAATGTACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PVVTSPHQGAACLLVLQGGQAYL*SNVPSC
Trigger: GCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCCC...GCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CAA 90 bp GGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAACAGCTTCCGGGAACTaGGCTGCAGAGGCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: GPQWCPEASASSCHLSASTASGN*AAEAGA
Trigger: CGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTGT...TGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp CCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGCATACAGCTTCCGGGAACTaGGCTGCAGAGGCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: PPNLRLMGRVHKAAQKVHTASGN*AAEAGA
Trigger: CGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTGT...ATGCACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGG +
Preference number: 5 (lower is better)
Translates to: GTEQSQLAPDPAEQPPGNSISIQ*SPLRIR
Trigger: CCTGATGCGGAGAGGTGACAACTGGATGCTGATGCT...GTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGAGGGAGGAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGG +
Preference number: 5 (lower is better)
Translates to: ALKLSLQLRHCCTGRGGRSISIQ*SPLRIR
Trigger: CCTGATGCGGAGAGGTGACAACTGGATGCTGATGCT...CCTCCCTCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGGGTGGGCCAGAACCTTaGGATTTGGTTTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: EGGELLPPSQVWGPKPLEGGPEP*DLVWGP
Trigger: TGGCCCCCAAACCAAATCCAAAGGTTCTGGCCCACC...CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp CCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAAAGCACCGGGGAGTGCTaGCTGTGCAGTTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PGAMVSPVPKPLLLQALKSTGEC*LCSSLG
Trigger: GCCCAAGGAACTGCACAGCAAGCACTCCCCGGTGCT...TTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377254.7
ENST00000496844.6
CDS TCA 90 bp CAGCCTCAGAGAGAGAGAAGTCTCCCTGCTGGACAGTCCTGTGGATaGTGTCATTGCGGTTCACTGCCACGACCAGACGGATGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: QPQRERSLPAGQSCG*CHCGSLPRPDGWAG
Trigger: GCCTGCCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCTCTCTGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS GCA 90 bp AGCTCCATGCCCCTCACGCAACAGGACTGTCCCTGTTCTGTCCAATaGCTTCCAGGGGCAGCATTCCCAGGCCAATTCAGCAAAGCGGTG +
Preference number: 5 (lower is better)
Translates to: SSMPLTQQDCPCSVQ*LPGAAFPGQFSKAV
Trigger: CACCGCTTTGCTGAATTGGCCTGGGAATGCTGCCCCTGGAAGGCATTGGACAGAACAGGGACAGTCCTGTTGCGTGAGGGGCATGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449349.5
CDS CCA 90 bp ATAGGAGAGTGTGCTCCACTGGCACAGGGTCCCTCTGTCCAACTGTaGGAGCTCTTCAGGCATAAAGAGGCCCCCGTCAGGTGCATAGCC +
Preference number: 5 (lower is better)
Translates to: IGECAPLAQGPSVQL*ELFRHKEAPVRCIA
Trigger: GGCTATGCACCTGACGGGGGCCTCTTTATGCCTGAAGAGCTCCCACAGTTGGACAGAGGGACCCTGTGCCAGTGGAGCACACTCTCCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 90 bp GGGCACAGCAAGTACTGGTTCTCATCCCAGCAGCGGCCCATGGTCTaGGTGATGGCTTCATCCGACACTGACACGGATGTCACTGCCTCT +
Preference number: 5 (lower is better)
Translates to: GHSKYWFSSQQRPMV*VMASSDTDTDVTAS
Trigger: AGAGGCAGTGACATCCGTGTCAGTGTCGGATGAAGCCATCACCCAGACCATGGGCCGCTGCTGGGATGAGAACCAGTACTTGCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS-3UTR CAA 90 bp GTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGAGGGCCCCCTCAAAGTaGACCCGTGGGGCTACGCCC +
Preference number: 5 (lower is better)
Translates to: VSPVPKPLLLQALKLSLQRAPSK*TRGATP
Trigger: GGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCCT...CTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCCATGTTCTTTGCCCCTaGAACACTCTCAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: SQGTEQSQLAPDPAEQPPHVLCP*NTLNGS
Trigger: GCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACATG...GGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACCTCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: ERSKASWLQIQLSSLPETSASAP*SSGAPE
Trigger: TTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGA...GGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCTCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: LARERSKASWLQIQLSSLSASAP*SSGAPE
Trigger: TTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGA...GAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTAGGACCCGGGACCAGTaGATCGAATTCAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: QAQTSQGTEQSQLAPDPARTRDQ*IEFRLI
Trigger: GATGAGCCTGAATTCGATCAACTGGTCCCGGGTCCT...AGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGAGGACCCGGGACCAGTaGATCGAATTCAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: EGGELLPPSQVWGPKPLERTRDQ*IEFRLI
Trigger: GATGAGCCTGAATTCGATCAACTGGTCCCGGGTCCT...CTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp GCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCTGTGGATGATGTCATaGCGGTTCACTGCCACGACC +
Preference number: 5 (lower is better)
Translates to: AQTSQGTEQSQLAPDPAELWMMS*RFTATT
Trigger: GGTCGTGGCAGTGAACCGCAATGACATCATCCACAG...CTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACAGCTTCCGGGAACTaGGCTGCAGAGGCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: SHGQSCAQASSFAGPETFTASGN*AAEAGA
Trigger: CGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTGT...GAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATC +
Preference number: 5 (lower is better)
Translates to: GVLNPWSHGQSCAQASSFVQRVS*CSRATI
Trigger: GATCGTAGCCCTGGAGCACAAGGAGACACGCTGCAC...AAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGG +
Preference number: 5 (lower is better)
Translates to: QAQTSQGTEQSQLAPDPASISIQ*SPLRIR
Trigger: CCTGATGCGGAGAGGTGACAACTGGATGCTGATGCT...AGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp ACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGACTGCCTCTGAAAGCTaGCTGTGCAGTTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TRHRLARERSKASWLQIQTASES*LCSSLG
Trigger: GCCCAAGGAACTGCACAGCAAGCTTTCAGAGGCAGT...CTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR CAA 90 bp TGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCACTGCCTCTGAAAGCTaGCTGTGCAGTTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: CVKVVSCSHLHRSGVLNPTASES*LCSSLG
Trigger: GCCCAAGGAACTGCACAGCAAGCTTTCAGAGGCAGT...GGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324166.7
ENST00000674334.2
CDS-3UTR CAA 90 bp GTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGAGCACCGGGGAGTGCTaGCTGTGCAGTTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: VLNGVPKHQHPVVTSPHQSTGEC*LCSSLG
Trigger: GCCCAAGGAACTGCACAGCAAGCACTCCCCGGTGCT...CTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CAA 90 bp TGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACAAGGGCCCCCTCAAAGTaGACCCGTGGGGCTACGCCC +
Preference number: 5 (lower is better)
Translates to: CAQASSFAGPETFTTAQTRAPSK*TRGATP
Trigger: GGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCCT...TGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GTCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCGGAGCTCCTGAATCTTaGTGCAGTGACCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: VWGPKPLEPWSVLCPSLFGAPES*CSDLWA
Trigger: TGCCCAAAGGTCACTGCACAAAGATTCAGGAGCTCC...GAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATGGAGCTCCTGAATCTTaGTGCAGTGACCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: VTSPHQGAACLLVLQGYDGAPES*CSDLWA
Trigger: TGCCCAAAGGTCACTGCACAAAGATTCAGGAGCTCC...ATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp CTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCTCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: LREGGELLPPSQVWGPKPSASAP*SSGAPE
Trigger: TTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGA...GGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp TCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGTCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: SSCHLSASGCSVSPCAPGSASAP*SSGAPE
Trigger: TTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGA...CCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp GCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGTCGGCAAACACAGTCTaGATCGGCTCATCGAGCTCA +
Preference number: 5 (lower is better)
Translates to: AQTSQGTEQSQLAPDPAESANTV*IGSSSS
Trigger: TGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCGA...CTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp ATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGAGGACCCGGGACCAGTaGATCGAATTCAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: IQLSPLRIRVQRVSLCSRRTRDQ*IEFRLI
Trigger: GATGAGCCTGAATTCGATCAACTGGTCCCGGGTCCT...CCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp GCAGCCTCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAAGGACCCGGGACCAGTaGATCGAATTCAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: AASRKPPNLRLMGRVHKARTRDQ*IEFRLI
Trigger: GATGAGCCTGAATTCGATCAACTGGTCCCGGGTCCT...TGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCGGGCAGGCCTATCTTTaGAGCAATGTACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PKHQHPVVTSPHQGAACLGQAYL*SNVPSC
Trigger: GCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCCC...GAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CAA 90 bp TCTGGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTCTGTGGATGATGTCATaGCGGTTCACTGCCACGACC +
Preference number: 5 (lower is better)
Translates to: SGVLNPWSHGQSCAQASSLWMMS*RFTATT
Trigger: GGTCGTGGCAGTGAACCGCAATGACATCATCCACAG...AGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTC +
Preference number: 5 (lower is better)
Translates to: GTEQSQLAPDPAEQPPGNGQIHT*GPFKLL
Trigger: GAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCC...GTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CTGGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTC +
Preference number: 5 (lower is better)
Translates to: LVTRHRLARERSKASWLQGQIHT*GPFKLL
Trigger: GAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCC...CTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp TCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCTTGCTGTGCAGTTCCTaGGGCAGATTCACACTTTGG +
Preference number: 5 (lower is better)
Translates to: SPHQGAACLLVLQGYDLRLLCSS*GRFTLW
Trigger: CCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAA...GCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CAA 90 bp CTGGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGTTGCTGTGCAGTTCCTaGGGCAGATTCACACTTTGG +
Preference number: 5 (lower is better)
Translates to: LVTRHRLARERSKASWLQLLCSS*GRFTLW
Trigger: CCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAA...CTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACACAGCTTCCGGGAACTaGGCTGCAGAGGCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: ASSFAGPETFTTAQTLLHTASGN*AAEAGA
Trigger: CGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTGT...GTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp TCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACAGCTTCCGGGAACTaGGCTGCAGAGGCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: SCAQASSFAGPETFTTAQTASGN*AAEAGA
Trigger: CGCCCCTGCCTCTGCAGCCAAGTTCCCGGAAGCTGT...CTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp TGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCCATGTTCTTTGCCCCTaGAACACTCTCAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: CVKVVSCSHLHRSGVLNPHVLCP*NTLNGS
Trigger: GCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACATG...GGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp TCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCATGTTCTTTGCCCCTaGAACACTCTCAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: SSCHLSASGCSVSPCAPGHVLCP*NTLNGS
Trigger: GCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACATG...CCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp CAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTCATGTTCTTTGCCCCTaGAACACTCTCAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: QAQTSQGTEQSQLAPDPAHVLCP*NTLNGS
Trigger: GCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACATG...AGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGGCAGGACCCGGGACCAGTaGATCGAATTCAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: RVEASDKVGQNLWIWFGGRTRDQ*IEFRLI
Trigger: GATGAGCCTGAATTCGATCAACTGGTCCCGGGTCCT...GCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp CCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAAGGGCAGGCCTATCTTTaGAGCAATGTACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PGAMVSPVPKPLLLQALKGQAYL*SNVPSC
Trigger: GCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCCC...TTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGCGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTC +
Preference number: 5 (lower is better)
Translates to: KVVSCSHLHRSGVLNPWSGQIHT*GPFKLL
Trigger: GAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCC...GCTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR CAA 90 bp AGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCTTGCTGTGCAGTTCCTaGGGCAGATTCACACTTTGG +
Preference number: 5 (lower is better)
Translates to: RLARERSKASWLQIQLSSLLCSS*GRFTLW
Trigger: CCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAA...GCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp TCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGTCCTGTCTCTCCCACTaGCTGTGCAGTTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SMVSRSISIQLSPLRIRVSCLSH*LCSSLG
Trigger: GCCCAAGGAACTGCACAGCAAGTGGGAGAGACAGGA...CACCCTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS-3UTR CAA 90 bp ATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATC +
Preference number: 5 (lower is better)
Translates to: MTPPLSAKVLNGVPKHQHVQRVS*CSRATI
Trigger: GATCGTAGCCCTGGAGCACAAGGAGACACGCTGCAC...ATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp ATCAGCATCCAGTTGTCACCTCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGG +
Preference number: 5 (lower is better)
Translates to: ISIQLSPLRIRVQRVSLCSISIQ*SPLRIR
Trigger: CCTGATGCGGAGAGGTGACAACTGGATGCTGATGCT...GCACAAGGAGACACGCTGCACCCTGATGCGGAGAGGTGACAACTGGATGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp GGTGACCAGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCCAAGCCTCTTCTTTaGCAGGCCCTGAAACTTTCA +
Preference number: 5 (lower is better)
Translates to: GDQAQTSQGTEQSQLAPDPKPLL*QALKLS
Trigger: TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG...ATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCTGGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AGGCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGCCCAAGCCTCTTCTTTaGCAGGCCCTGAAACTTTCA +
Preference number: 5 (lower is better)
Translates to: RHRLARERSKASWLQIQLPKPLL*QALKLS
Trigger: TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG...CAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTCCCGGAAACCCCAGAACCTTTGGATTaGGTTTGGGGGCCAAAATCA +
Preference number: 5 (lower is better)
Translates to: ERSKASWLQIQLSSLPETPEPLD*VWGPKS
Trigger: TGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTGG...GGTTTCCGGGAGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp CTACTGGGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGGGCCAGAACCTTaGGATTTGGTTTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LLGGVEGMTPPLSAKVLNGGPEP*DLVWGP
Trigger: TGGCCCCCAAACCAAATCCAAAGGTTCTGGCCCACC...ATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
CDS TCA 90 bp ACAGCAAGTACTGGTTCTCATCCCAGCAGCGGCCCATGGTCTGGGTaGTGGCTTCATCCGACACTGACACGGATGTCACTGCCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: TASTGSHPSSGPWSG*WLHPTLTRMSLPLK
Trigger: TTTCAGAGGCAGTGACATCCGTGTCAGTGTCGGATGAAGCCATCACCCAGACCATGGGCCGCTGCTGGGATGAGAACCAGTACTTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS CCA 90 bp TTAACAGCCTCAGAGAGAGAGAAGTCTCCCTGCTGGACAGTCCTGTaGATGATGTCATTGCGGTTCACTGCCACGACCAGACGGATGGGC +
Preference number: 5 (lower is better)
Translates to: LTASEREKSPCWTVL*MMSLRFTATTRRMG
Trigger: GCCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCTCTCTGAGGCTGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 90 bp ACCGGGGAGTGCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTCACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TGECLLCSSLGRFTL*VLSNCSMRALVTWL
Trigger: CAGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCACTCCCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000496844.6
ENST00000674282.1
CDS-3UTR CAA 90 bp ATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGAGGGCCCCCTCAAAGTaGACCCGTGGGGCTACGCCC +
Preference number: 5 (lower is better)
Translates to: IWFGGQNQLRLREHTKPARAPSK*TRGATP
Trigger: GGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCCT...CGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000674334.2
CDS-3UTR CAA 90 bp AGCCTGCGTGAAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACATGTTCTTTGCCCCTaGAACACTCTCAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: SLREGGELLPPSQVWGPKHVLCP*NTLNGS
Trigger: GCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACATG...TTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTTCACGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp TTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGACATGTTCTTTGCCCCTaGAACACTCTCAATGGCAGC +
Preference number: 5 (lower is better)
Translates to: LQALKLSLQLRHCCTGRGHVLCP*NTLNGS
Trigger: GCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACATG...TCCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAATCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: PGAMVSPVPKPLLLQALKSASAP*SSGAPE
Trigger: TTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGA...TTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGGCTCGGCAAACACAGTCTaGATCGGCTCATCGAGCTCA +
Preference number: 5 (lower is better)
Translates to: RVEASDKVGQNLWIWFGGSANTV*IGSSSS
Trigger: TGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCGA...GCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp CCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAATCGGCAAACACAGTCTaGATCGGCTCATCGAGCTCA +
Preference number: 5 (lower is better)
Translates to: PGAMVSPVPKPLLLQALKSANTV*IGSSSS
Trigger: TGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCGA...TTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp TCTCCGCATCAGGGTGCAGCGTGTCTCCTTGTGCTCCAGGGCTACGATCTCCGCTTCAGGCTCATCAGATaGTGCTTCTTGACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: SPHQGAACLLVLQGYDLRFRLIR*CFLTKA
Trigger: GGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAA...GCGGAGATCGTAGCCCTGGAGCACAAGGAGACACGCTGCACCCTGATGCGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp CTACTGGGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATAGGACCCGGGACCAGTaGATCGAATTCAGGCTCATC +
Preference number: 5 (lower is better)
Translates to: LLGGVEGMTPPLSAKVLNRTRDQ*IEFRLI
Trigger: GATGAGCCTGAATTCGATCAACTGGTCCCGGGTCCT...ATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp CTACTGGGAGGTGTTGAGGGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATCTGTGGATGATGTCATaGCGGTTCACTGCCACGACC +
Preference number: 5 (lower is better)
Translates to: LLGGVEGMTPPLSAKVLNLWMMS*RFTATT
Trigger: GGTCGTGGCAGTGAACCGCAATGACATCATCCACAG...ATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCCCTCAACACCTCCCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CAA 90 bp GTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCAGCTGTGGATGATGTCATaGCGGTTCACTGCCACGACC +
Preference number: 5 (lower is better)
Translates to: VLNGVPKHQHPVVTSPHQLWMMS*RFTATT
Trigger: GGTCGTGGCAGTGAACCGCAATGACATCATCCACAG...CTGATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CAA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATC +
Preference number: 5 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTVQRVS*CSRATI
Trigger: GATCGTAGCCCTGGAGCACAAGGAGACACGCTGCAC...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AAGGTGGTGAGCTGCTCCCACCTTCACAGGTCTGGGGTCCTAAACCCCTGGAGCCCAGAACCTTTGGATTaGGTTTGGGGGCCAAAATCA +
Preference number: 5 (lower is better)
Translates to: KVVSCSHLHRSGVLNPWSPEPLD*VWGPKS
Trigger: TGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTGG...GCTCCAGGGGTTTAGGACCCCAGACCTGTGAAGGTGGGAGCAGCTCACCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS TCA 90 bp GTTCCTTGGGCAGATTCACACTTTGGGTCCTTTCAAACTGCTCCATaGGGGCTCTTGTCACCTGGCTGTCAGAGCCAGAGAGCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: VPWADSHFGSFQTAP*GLLSPGCQSQRAAR
Trigger: TCTGGCTGCTCTCTGGCTCTGACAGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS GCA 90 bp GTCTCCCTGCTGGACAGTCCTGTGGATGATGTCATTGCGGTTCACTaGCACGACCAGACGGATGGGCAGGCCTATCTTTTGAGCAATGTA +
Preference number: 5 (lower is better)
Translates to: VSLLDSPVDDVIAVH*HDQTDGQAYLLSNV
Trigger: TACATTGCTCAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS GCA 90 bp CTGTGCAGTTCCTTGGGCAGATTCACACTTTGGGTCCTTTCAAACTaGTCCATGAGGGCTCTTGTCACCTGGCTGTCAGAGCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LCSSLGRFTLWVLSN*SMRALVTWLSEPES
Trigger: GCTCTCTGGCTCTGACAGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS GCA 90 bp ATACCCATGCCCCTCACGCAACAGGACTGTCCCTGTTCTGTCCAATaGCTTCCAGGGGCAGCATTCCCAGGCCAATTCAGCAAAGCTAAA +
Preference number: 5 (lower is better)
Translates to: IPMPLTQQDCPCSVQ*LPGAAFPGQFSKAK
Trigger: TTTAGCTTTGCTGAATTGGCCTGGGAATGCTGCCCCTGGAAGGCATTGGACAGAACAGGGACAGTCCTGTTGCGTGAGGGGCATGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS-3UTR CAA 90 bp GTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGAGCTCCTGAATCTTaGTGCAGTGACCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: VLNPWSHGQSCAQASSFAGAPES*CSDLWA
Trigger: TGCCCAAAGGTCACTGCACAAAGATTCAGGAGCTCC...TGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GCACAGACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGTTCAGGCTCATCAGATaGTGCTTCTTGACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: AQTSQGTEQSQLAPDPAEFRLIR*CFLTKA
Trigger: GGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAA...CTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp ACTAGCCAGGGAACGGAGCAAAGCCAGCTGGCTCCAGATCCAGCTGAGCAGCCTTTCAGGCTCATCAGATaGTGCTTCTTGACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: TSQGTEQSQLAPDPAEQPFRLIR*CFLTKA
Trigger: GGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAA...AGGCTGCTCAGCTGGATCTGGAGCCAGCTGGCTTTGCTCCGTTCCCTGGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGGCGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTC +
Preference number: 5 (lower is better)
Translates to: RVEASDKVGQNLWIWFGGGQIHT*GPFKLL
Trigger: GAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCC...GCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR CAA 90 bp CAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGGTGCAGCGTGTCTCCTaGTGCTCCAGGGCTACGATC +
Preference number: 5 (lower is better)
Translates to: QASSFAGPETFTTAQTLLVQRVS*CSRATI
Trigger: GATCGTAGCCCTGGAGCACAAGGAGACACGCTGCAC...CAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTGCAGGCCCAAGCCTCTTCTTTaGCAGGCCCTGAAACTTTCA +
Preference number: 5 (lower is better)
Translates to: PKPLEPWSVLCPSLFFCRPKPLL*QALKLS
Trigger: TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG...CCTGCAAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GGCATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCCCAAGCCTCTTCTTTaGCAGGCCCTGAAACTTTCA +
Preference number: 5 (lower is better)
Translates to: GMTPPLSAKVLNGVPKHQPKPLL*QALKLS
Trigger: TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG...CTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp TTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGGGCCGGGGCCAGAACCTTTGGATTaGGTTTGGGGGCCAAAATCA +
Preference number: 5 (lower is better)
Translates to: FAGPETFTTAQTLLHGPGPEPLD*VWGPKS
Trigger: TGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTGG...CCCCGGCCCGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS GCA 90 bp GTTGTGCAGGACAGGGACAGGTCCTTAAATGCATATGTGACGCCATaGCACAGCTCCAACACGTTCAGCCCATTCCTCAACCTGGACAGA +
Preference number: 5 (lower is better)
Translates to: VVQDRDRSLNAYVTP*HSSNTFSPFLNLDR
Trigger: TCTGTCCAGGTTGAGGAATGGGCTGAACGTGTTGGAGCTGTGGCATGGCGTCACATATGCATTTAAGGACCTGTCCCTGTCCTGCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 90 bp GCCAAGGTTGATTTAACAGCCTCAGAGAGAGAGAAGTCTCCCTGCTaGACAGTCCTGTGGATGATGTCATTGCGGTTCACTGCCACGACC +
Preference number: 5 (lower is better)
Translates to: AKVDLTASEREKSPC*TVLWMMSLRFTATT
Trigger: GGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCTCTCTGAGGCTGTTAAATCAACCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 90 bp TGTCTCTCCCACTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTCACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: CLSHLLCSSLGRFTL*VLSNCSMRALVTWL
Trigger: CAGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGTGGGAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS CCA 90 bp GCCTCTGAAAGCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTCACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ASESLLCSSLGRFTL*VLSNCSMRALVTWL
Trigger: CAGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCTTTCAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS-3UTR CAA 90 bp ATGACTCCTCCACTGTCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATGGAGCTCCTGAATCTTaGTGCAGTGACCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: MTPPLSAKVLNGVPKHQHGAPES*CSDLWA
Trigger: TGCCCAAAGGTCACTGCACAAAGATTCAGGAGCTCC...ATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGACAGTGGAGGAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGGGAGCTCCTGAATCTTaGTGCAGTGACCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVGAPES*CSDLWA
Trigger: TGCCCAAAGGTCACTGCACAAAGATTCAGGAGCTCC...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGGTGTCGGCAAACACAGTCTaGATCGGCTCATCGAGCTCA +
Preference number: 5 (lower is better)
Translates to: KPPNLRLMGRVHKAAQKVSANTV*IGSSSS
Trigger: TGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCGA...CACCTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCGGGCAGGCCTATCTTTaGAGCAATGTACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PKPLLLQALKLSLQLRHCGQAYL*SNVPSC
Trigger: GCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCCC...GCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCTTGCTGTGCAGTTCCTaGGGCAGATTCACACTTTGG +
Preference number: 5 (lower is better)
Translates to: LRSSMVSRSISIQLSPLRLLCSS*GRFTLW
Trigger: CCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAA...GCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
CDS-3UTR CAA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGTTGCTGTGCAGTTCCTaGGGCAGATTCACACTTTGG +
Preference number: 5 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKLLCSS*GRFTLW
Trigger: CCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAA...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGCCCAAGCCTCTTCTTTaGCAGGCCCTGAAACTTTCA +
Preference number: 5 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKPKPLL*QALKLS
Trigger: TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp TGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACAGGTGGGCCAGAACCTTaGGATTTGGTTTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: CAQASSFAGPETFTTAQTGGPEP*DLVWGP
Trigger: TGGCCCCCAAACCAAATCCAAAGGTTCTGGCCCACC...TGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS TCA 90 bp ATGTGGCTGTACCCTTTCCTTTCTCTGTGGTGTGTGGGTAGTGACTaGCCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: MWLYPFLSLWCVGSD*PCCAVPWADSHFGS
Trigger: GGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGGTCAGTCACTACCCACACACCACAGAGAAAGGAAAGGGTACAGCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476349.1
CDS GCA 90 bp GTACTGCAGGAACTGTGTTGTGCAGGACAGGGACAGGTCCTTAAATaGATATGTGACGCCATGCCACAGCTCCAACACGTTCAGCCCATT +
Preference number: 5 (lower is better)
Translates to: VLQELCCAGQGQVLK*ICDAMPQLQHVQPI
Trigger: AATGGGCTGAACGTGTTGGAGCTGTGGCATGGCGTCACATATGCATTTAAGGACCTGTCCCTGTCCTGCACAACACAGTTCCTGCAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS GCA 90 bp GATGCCAAGGTTGATTTAACAGCCTCAGAGAGAGAGAAGTCTCCCTaGTGGACAGTCCTGTGGATGATGTCATTGCGGTTCACTGCCACG +
Preference number: 5 (lower is better)
Translates to: DAKVDLTASEREKSP*WTVLWMMSLRFTAT
Trigger: CGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCTCTCTGAGGCTGTTAAATCAACCTTGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 90 bp CCAAGTCTGCTATGTGGCTGTACCCTTTCCTTTCTCTGTGGTGTGTaGGTAGTGACTGACCTTGCTGTGCAGTTCCTTGGGCAGATTCAC +
Preference number: 5 (lower is better)
Translates to: PSLLCGCTLSFLCGV*VVTDLAVQFLGQIH
Trigger: GTGAATCTGCCCAAGGAACTGCACAGCAAGGTCAGTCACTACCCACACACCACAGAGAAAGGAAAGGGTACAGCCACATAGCAGACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476349.1
CDS-3UTR CAA 90 bp CCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACACTGCTGCACGTCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: PLLLQALKLSLQLRHCCTSASAP*SSGAPE
Trigger: TTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGA...CGTGCAGCAGTGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp GGGGTCCTAAACCCCTGGAGCCATGGTCAGTCCTGTGCCCAAGCCTCTTCTTTTTTCAGGCTCATCAGATaGTGCTTCTTGACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: GVLNPWSHGQSCAQASSFFRLIR*CFLTKA
Trigger: GGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAA...AAAAGAAGAGGCTTGGGCACAGGACTGACCATGGCTCCAGGGGTTTAGGACCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AGGGTGGAAGCCTCTGACAAGGTGGGCCAGAACCTTTGGATTTGGTTTGGGGGCTTCAGGCTCATCAGATaGTGCTTCTTGACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: RVEASDKVGQNLWIWFGGFRLIR*CFLTKA
Trigger: GGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAA...GCCCCCAAACCAAATCCAAAGGTTCTGGCCCACCTTGTCAGAGGCTTCCACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS-3UTR CAA 90 bp TCCCGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGTTCAGGCTCATCAGATaGTGCTTCTTGACAAAAGCC +
Preference number: 5 (lower is better)
Translates to: SRKPPNLRLMGRVHKAAQFRLIR*CFLTKA
Trigger: GGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAA...CTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674334.2
CDS-3UTR CAA 90 bp AAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCGCATCCCAAGCCTCTTCTTTaGCAGGCCCTGAAACTTTCA +
Preference number: 5 (lower is better)
Translates to: KVLNGVPKHQHPVVTSPHPKPLL*QALKLS
Trigger: TGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGG...ATGCGGAGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
CDS-3UTR CAA 90 bp CGGAAACCTCCTAACCTACGCTTAATGGGGAGGGTGCACAAGGCAGCTCAGAAGCCAGAACCTTTGGATTaGGTTTGGGGGCCAAAATCA +
Preference number: 5 (lower is better)
Translates to: RKPPNLRLMGRVHKAAQKPEPLD*VWGPKS
Trigger: TGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTGG...CTTCTGAGCTGCCTTGTGCACCCTCCCCATTAAGCGTAGGTTAGGAGGTTTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS GCA 90 bp ACCAGGACCCGGGACCAGTTGATCGAATTCAGGCTCATCAGATTGTaGTTCTTGACAAAAGCCACATCGGCAAACACAGTCTTGATCGGC +
Preference number: 5 (lower is better)
Translates to: TRTRDQLIEFRLIRL*FLTKATSANTVLIG
Trigger: GCCGATCAAGACTGTGTTTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAATTCGATCAACTGGTCCCGGGTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS GCA 90 bp AAGAAGGCCTGGCGGTGGGGACAGATAATAGCAATAGTAGGCAACTaGCAGCTTGATATCCCTCTTGCTAAGGCGAAAGACCAACGCACA +
Preference number: 5 (lower is better)
Translates to: KKAWRWGQIIAIVGN*QLDIPLAKAKDQRT
Trigger: TGTGCGTTGGTCTTTCGCCTTAGCAAGAGGGATATCAAGCTGGCAGTTGCCTACTATTGCTATTATCTGTCCCCACCGCCAGGCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CCA 90 bp CCGGGAAAAGAGAAAGCTTGGTCCTCACCAATGAGAAAGAAGGCCTaGCGGTGGGGACAGATAATAGCAATAGTAGGCAACTGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: PGKEKAWSSPMRKKA*RWGQIIAIVGNCQL
Trigger: AAGCTGGCAGTTGCCTACTATTGCTATTATCTGTCCCCACCGCCAGGCCTTCTTTCTCATTGGTGAGGACCAAGCTTTCTCTTTTCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS-3UTR CAA 90 bp TTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAGCCTGCGTGGGGCAGGCCTATCTTTaGAGCAATGTACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LVWGPKSTKAQRTYKACVGQAYL*SNVPSC
Trigger: GCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCCC...CACGCAGGCTTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000674334.2
CDS-3UTR CAA 90 bp TCGGCTAAGGTCCTCAATGGTGTCCCGAAGCATCAGCATCCAGTTGTCACCTCTCCAGAACCTTTGGATTaGGTTTGGGGGCCAAAATCA +
Preference number: 5 (lower is better)
Translates to: SAKVLNGVPKHQHPVVTSPEPLD*VWGPKS
Trigger: TGATTTTGGCCCCCAAACCAAATCCAAAGGTTCTGG...AGAGGTGACAACTGGATGCTGATGCTTCGGGACACCATTGAGGACCTTAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
CDS CCA 90 bp CAATTAGATTCCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTCACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QLDSLLCSSLGRFTL*VLSNCSMRALVTWL
Trigger: CAGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGGAATCTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496165.1
CDS-3UTR CAA 90 bp TGTGCCCAAGCCTCTTCTTTTGCAGGCCCTGAAACTTTCACTACAGCTCAGACAGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTC +
Preference number: 5 (lower is better)
Translates to: CAQASSFAGPETFTTAQTGQIHT*GPFKLL
Trigger: GAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCC...TGTCTGAGCTGTAGTGAAAGTTTCAGGGCCTGCAAAAGAAGAGGCTTGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000496844.6
ENST00000674334.2
CDS TCA 90 bp CGATCAGATCATTTAATTCATCTTTTGGAAGGAGCTCAGAGCCAATaGAGAGGGCACACAGCTCCTTCACCAGGCCAGGATAGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: RSDHLIHLLEGAQSQ*RGHTAPSPGQDRRV
Trigger: CACTCTCCTATCCTGGCCTGGTGAAGGAGCTGTGTGCCCTCTTCATTGGCTCTGAGCTCCTTCCAAAAGATGAATTAAATGATCTGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS TCA 90 bp ACGTTCAGCCCATTCCTCAACCTGGACAGATGGACCACTTCTCTGTaGCGGAATCTGCTGAAGGCTCGGTCGATCAGATCATTTAATTCA +
Preference number: 5 (lower is better)
Translates to: TFSPFLNLDRWTTSL*RNLLKARSIRSFNS
Trigger: TGAATTAAATGATCTGATCGACCGAGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCATCTGTCCAGGTTGAGGAATGGGCTGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS TCA 90 bp GTCACCTCCAATAGTTTACTGTGTAGCCAGAACCCTGCCCAGAGCTaGGCCAAGGCATACACACCAACCTCGAATATGATGATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: VTSNSLLCSQNPAQS*AKAYTPTSNMMMKG
Trigger: TCCTTTCATCATCATATTCGAGGTTGGTGTGTATGCCTTGGCTCAGCTCTGGGCAGGGTTCTGGCTACACAGTAAACTATTGGAGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS GCA 90 bp AGGAATTTCTGCAATTCTGTGGTAAGAGTTAGAGCCAACGCAAACTaGCCAAGACCGTGGAGTAACAGAAAGGCCTTCATAGGACCAGAC +
Preference number: 5 (lower is better)
Translates to: RNFCNSVVRVRANAN*PRPWSNRKAFIGPD
Trigger: GTCTGGTCCTATGAAGGCCTTTCTGTTACTCCACGGTCTTGGGCAGTTTGCGTTGGCTCTAACTCTTACCACAGAATTGCAGAAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CCA 90 bp AATTCTGTGGTAAGAGTTAGAGCCAACGCAAACTGCCCAAGACCGTaGAGTAACAGAAAGGCCTTCATAGGACCAGACTTAAACGCTACG +
Preference number: 5 (lower is better)
Translates to: NSVVRVRANANCPRP*SNRKAFIGPDLNAT
Trigger: CGTAGCGTTTAAGTCTGGTCCTATGAAGGCCTTTCTGTTACTCCACGGTCTTGGGCAGTTTGCGTTGGCTCTAACTCTTACCACAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CCA 90 bp AAAGAGAAAGCTTGGTCCTCACCAATGAGAAAGAAGGCCTGGCGGTaGGGACAGATAATAGCAATAGTAGGCAACTGCCAGCTTGATATC +
Preference number: 5 (lower is better)
Translates to: KEKAWSSPMRKKAWR*GQIIAIVGNCQLDI
Trigger: GATATCAAGCTGGCAGTTGCCTACTATTGCTATTATCTGTCCCCACCGCCAGGCCTTCTTTCTCATTGGTGAGGACCAAGCTTTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CCA 90 bp AATATTTTTCAAATGCCCTTCCCTGGGTGGAAGGAATATCACACCTaGGGCACTGGGAAGGAGGATATGGAACAACTGTCCAGGAACAGA +
Preference number: 5 (lower is better)
Translates to: NIFQMPFPGWKEYHT*GTGKEDMEQLSRNR
Trigger: TCTGTTCCTGGACAGTTGTTCCATATCCTCCTTCCCAGTGCCCCAGGTGTGATATTCCTTCCACCCAGGGAAGGGCATTTGAAAAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS-3UTR CAA 90 bp CCTTTGGATTTGGTTTGGGGGCCAAAATCAACTAAGGCTCAGAGAACATACAAAAGCATCAGCATCCAGTaGTCACCTCTCCGCATCAGG +
Preference number: 5 (lower is better)
Translates to: PLDLVWGPKSTKAQRTYKSISIQ*SPLRIR
Trigger: CCTGATGCGGAGAGGTGACAACTGGATGCTGATGCT...TTTGTATGTTCTCTGAGCCTTAGTTGATTTTGGCCCCCAAACCAAATCCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000674334.2
CDS TCA 90 bp TCCTCAACCTGGACAGATGGACCACTTCTCTGTGACGGAATCTGCTaGAGGCTCGGTCGATCAGATCATTTAATTCATCTTTTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: SSTWTDGPLLCDGIC*RLGRSDHLIHLLEG
Trigger: TCCTTCCAAAAGATGAATTAAATGATCTGATCGACCGAGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCATCTGTCCAGGTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS GCA 90 bp CGCACAGAGTCATACACCCCTTTCAGGGACGTCTCGGTCCACTTCTaGTCAAAAACCAAACATCTTCAATGGTTATTGGAAACACTGTCT +
Preference number: 5 (lower is better)
Translates to: RTESYTPFRDVSVHF*SKTKHLQWLLETLS
Trigger: AGACAGTGTTTCCAATAACCATTGAAGATGTTTGGTTTTTGAGCAGAAGTGGACCGAGACGTCCCTGAAAGGGGTGTATGACTCTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CCA 90 bp AAAGTGATTATGCTGGGACAATGGTATAAGCCAGAACTCTCTCTCTaGCAACCTAGGATACAAGGTCACTCCGTATGGGAGTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: KVIMLGQWYKPELSL*QPRIQGHSVWESMS
Trigger: TGACATGGACTCCCATACGGAGTGACCTTGTATCCTAGGTTGCCAGAGAGAGAGTTCTGGCTTATACCATTGTCCCAGCATAATCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CCA 90 bp CATTCCCAGGCCAATTCAGCAAAGCTAAAGAGAAATACACATGGTTaGGTTCAATGTAAGCCAGAGGCGGAAATAGCAACCACAGGAGGT +
Preference number: 5 (lower is better)
Translates to: HSQANSAKLKRNTHG*VQCKPEAEIATTGG
Trigger: ACCTCCTGTGGTTGCTATTTCCGCCTCTGGCTTACATTGAACCCAACCATGTGTATTTCTCTTTAGCTTTGCTGAATTGGCCTGGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS TCA 90 bp CTAGCAATTTTGGTGCTTAGGGTACAACAAGGACCCTCAGGAGCCTaGATCTTGTGCACTAAAGTCTTGCAACAACTGCAGGAAAATGCA +
Preference number: 5 (lower is better)
Translates to: LAILVLRVQQGPSGA*ILCTKVLQQLQENA
Trigger: TGCATTTTCCTGCAGTTGTTGCAAGACTTTAGTGCACAAGATTCAGGCTCCTGAGGGTCCTTGTTGTACCCTAAGCACCAAAATTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS CCA 90 bp AGGCAAATGTGTAAGATGACACCAACACCTGCATTAGCTAAACCATaGACTTTTCACTGGCAAGTGTATGCACCTGCTAAAGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: RQMCKMTPTPALAKP*TFHWQVYAPAKEQS
Trigger: GCTCTGTTCTTTAGCAGGTGCATACACTTGCCAGTGAAAAGTCCATGGTTTAGCTAATGCAGGTGTTGGTGTCATCTTACACATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS CCA 90 bp TTATTGCATTCATCAGATTCCACATTTCTGCCATTACTTTACAACTaGGCACTGTTCTCCAATCCACAAGTCAGGAATGGAGCTTTCACT +
Preference number: 5 (lower is better)
Translates to: LLHSSDSTFLPLLYN*ALFSNPQVRNGAFT
Trigger: AGTGAAAGCTCCATTCCTGACTTGTGGATTGGAGAACAGTGCCCAGTTGTAAAGTAATGGCAGAAATGTGGAATCTGATGAATGCAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS GCA 72 bp GGCGCGAGGCCCGGTGCGCAGCAGGGCTGCCCGGGCTaGGAATGTGCGCACTCCCGAGTCCGCGTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: GARPGAQQGCPG*ECAHSRVRVPD
Trigger: GTCAGGGACGCGGACTCGGGAGTGCGCACATTCGCAGCCCGGGCAGCCCTGCTGCGCACCGGGCCTCGCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377254.7
ENST00000674334.2
CDS TCA 72 bp GGGCTGCGAATGTGCGCACTCCCGAGTCCGCGTCCCTaGCGGTGCGGTGGGGCTTCCGGTCGGGGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: GLRMCALPSPRP*RCGGASGRGRS
Trigger: GCTCCGGCCCCGACCGGAAGCCCCACCGCACCGTCAGGGACGCGGACTCGGGAGTGCGCACATTCGCAGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377254.7
CDS CCA 72 bp GTGCGCACTCCCGAGTCCGCGTCCCTGACGGTGCGGTaGGGCTTCCGGTCGGGGCCGGAGCTAGGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: VRTPESASLTVR*GFRSGPELGFS
Trigger: TGAGAACCCTAGCTCCGGCCCCGACCGGAAGCCCCACCGCACCGTCAGGGACGCGGACTCGGGAGTGCGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377254.7
CDS GCA 72 bp AGGTTCCAGAAACGGGCGGGGCGACGGACGTGGGCCTaGGGGAATCAGGGCCGAACGGAGCCGCGAGAGCGT +
Preference number: 6 (lower is better)
Translates to: RFQKRAGRRTWA*GNQGRTEPRER
Trigger: ACGCTCTCGCGGCTCCGTTCGGCCCTGATTCCCGCAGGCCCACGTCCGTCGCCCCGCCCGTTTCTGGAACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS CCA 72 bp AACCAAAGGTTCCAGAAACGGGCGGGGCGACGGACGTaGGCCTGCGGGAATCAGGGCCGAACGGAGCCGCGA +
Preference number: 6 (lower is better)
Translates to: NQRFQKRAGRRT*ACGNQGRTEPR
Trigger: TCGCGGCTCCGTTCGGCCCTGATTCCCGCAGGCCCACGTCCGTCGCCCCGCCCGTTTCTGGAACCTTTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS CCA 72 bp TTCACGGCCACCGCTGAGTGGGGGCACAGCAAGTACTaGTTCTCATCCCAGCAGCGGCCCATGGTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: FTATAEWGHSKY*FSSQQRPMVWV
Trigger: CACCCAGACCATGGGCCGCTGCTGGGATGAGAACCAGTACTTGCTGTGCCCCCACTCAGCGGTGGCCGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS GCA 72 bp TTCCTAGTCTGTGGCTCTGACATCTGTGGGCCCCCGTaGAAGTCTCACGTGGGCTGCCACGTGCCACTCTCT +
Preference number: 6 (lower is better)
Translates to: FLVCGSDICGPP*KSHVGCHVPLS
Trigger: AGAGAGTGGCACGTGGCAGCCCACGTGAGACTTGCACGGGGGCCCACAGATGTCAGAGCCACAGACTAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CCA 72 bp TGTGCTCCACTGGCACAGGGTCCCTCTGTCCAACTGTaGGAGCTCTTCAGGCATAAAGAGGCCCCCGTCAGG +
Preference number: 6 (lower is better)
Translates to: CAPLAQGPSVQL*ELFRHKEAPVR
Trigger: CCTGACGGGGGCCTCTTTATGCCTGAAGAGCTCCCACAGTTGGACAGAGGGACCCTGTGCCAGTGGAGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS TCA 72 bp ACTGCCACGACCAGACGGATGGGCAGGCCTATCTTTTaGGCAATGTACCCAGCTGCAAGGTTACCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: TATTRRMGRPIF*AMYPAARLPAA
Trigger: GGCTGCCGGTAACCTTGCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000476349.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS TCA 72 bp ACTGGTTCTCATCCCAGCAGCGGCCCATGGTCTGGGTaGTGGCTTCATCCGACACTGACACGGATGTCACTG +
Preference number: 6 (lower is better)
Translates to: TGSHPSSGPWSG*WLHPTLTRMSL
Trigger: CAGTGACATCCGTGTCAGTGTCGGATGAAGCCATCACCCAGACCATGGGCCGCTGCTGGGATGAGAACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS GCA 72 bp TGGGAGCTCTTCAGGCATAAAGAGGCCCCCGTCAGGTaGATAGCCAGAGAAGAGGGCCCCCTCAAAGTTGAC +
Preference number: 6 (lower is better)
Translates to: WELFRHKEAPVR*IAREEGPLKVD
Trigger: GTCAACTTTGAGGGGGCCCTCTTCTCTGGCTATGCACCTGACGGGGGCCTCTTTATGCCTGAAGAGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 72 bp ATAGCCAGAGAAGAGGGCCCCCTCAAAGTTGACCCGTaGGGCTACGCCCCTGGTGCTGACATACCACATGAT +
Preference number: 6 (lower is better)
Translates to: IAREEGPLKVDP*GYAPGADIPHD
Trigger: ATCATGTGGTATGTCAGCACCAGGGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCCTCTTCTCTGGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 72 bp TGGCTGTCCCTGGGATATCTGTCACGCTCCCTCTTCTaGGCCCACAGTTTCCAAGGCACAGTTCCACACAGC +
Preference number: 6 (lower is better)
Translates to: WLSLGYLSRSLF*AHSFQGTVPHS
Trigger: GCTGTGTGGAACTGTGCCTTGGAAACTGTGGGCCCAGAAGAGGGAGCGTGACAGATATCCCAGGGACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS CAA 72 bp CACTGCCACGACCAGACGGATGGGCAGGCCTATCTTTaGAGCAATGTACCCAGCTGCAAGGTTACCGGCAGC +
Preference number: 6 (lower is better)
Translates to: HCHDQTDGQAYL*SNVPSCKVTGS
Trigger: GCTGCCGGTAACCTTGCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000476349.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CAA 72 bp AAGTCTCCCTGCTGGACAGTCCTGTGGATGATGTCATaGCGGTTCACTGCCACGACCAGACGGATGGGCAGG +
Preference number: 6 (lower is better)
Translates to: KSPCWTVLWMMS*RFTATTRRMGR
Trigger: CCTGCCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 72 bp AAGTACTGGTTCTCATCCCAGCAGCGGCCCATGGTCTaGGTGATGGCTTCATCCGACACTGACACGGATGTC +
Preference number: 6 (lower is better)
Translates to: KYWFSSQQRPMV*VMASSDTDTDV
Trigger: GACATCCGTGTCAGTGTCGGATGAAGCCATCACCCAGACCATGGGCCGCTGCTGGGATGAGAACCAGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS CAA 72 bp CGAGGCAGCACCGGGGAGTGCTTGCTGTGCAGTTCCTaGGGCAGATTCACACTTTGGGTCCTTTCAAACTGC +
Preference number: 6 (lower is better)
Translates to: RGSTGECLLCSS*GRFTLWVLSNC
Trigger: GCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCACTCCCCGGTGCTGCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000496844.6
ENST00000674282.1
CDS CAA 90 bp GAGAGAGAGAAGTCTCCCTGCTGGACAGTCCTGTGGATGATGTCATaGCGGTTCACTGCCACGACCAGACGGATGGGCAGGCCTATCTTT +
Preference number: 6 (lower is better)
Translates to: EREKSPCWTVLWMMS*RFTATTRRMGRPIF
Trigger: AAAGATAGGCCTGCCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CAA 90 bp CACCGGGGAGTGCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTCACCTGGCT +
Preference number: 6 (lower is better)
Translates to: HRGVLAVQFLGQIHT*GPFKLLHEGSCHLA
Trigger: AGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCACTCCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000496844.6
ENST00000674282.1
CDS TCA 72 bp AGAGAGAGAAGTCTCCCTGCTGGACAGTCCTGTGGATaGTGTCATTGCGGTTCACTGCCACGACCAGACGGA +
Preference number: 6 (lower is better)
Translates to: RERSLPAGQSCG*CHCGSLPRPDG
Trigger: TCCGTCTGGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS TCA 72 bp GTCTATCTGCTGGTAATGGTAGTTCACGGCCACCGCTaGGTGGGGGCACAGCAAGTACTGGTTCTCATCCCA +
Preference number: 6 (lower is better)
Translates to: VYLLVMVVHGHR*VGAQQVLVLIP
Trigger: TGGGATGAGAACCAGTACTTGCTGTGCCCCCACTCAGCGGTGGCCGTGAACTACCATTACCAGCAGATAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS GCA 72 bp CTGGACAGTCCTGTGGATGATGTCATTGCGGTTCACTaGCACGACCAGACGGATGGGCAGGCCTATCTTTTG +
Preference number: 6 (lower is better)
Translates to: LDSPVDDVIAVH*HDQTDGQAYLL
Trigger: CAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 72 bp GAGGCAGCACCGGGGAGTGCTTGCTGTGCAGTTCCTTaGGCAGATTCACACTTTGGGTCCTTTCAAACTGCT +
Preference number: 6 (lower is better)
Translates to: EAAPGSACCAVP*ADSHFGSFQTA
Trigger: AGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCACTCCCCGGTGCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000496844.6
ENST00000674282.1
CDS CCA 72 bp AGAGGGTATCGGAGCATGCCGGGAAAAGAGAAAGCTTaGTCCTCACCAATGAGAAAGAAGGCCTGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: RGYRSMPGKEKA*SSPMRKKAWRW
Trigger: CCACCGCCAGGCCTTCTTTCTCATTGGTGAGGACCAAGCTTTCTCTTTTCCCGGCATGCTCCGATACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS GCA 72 bp CCTGTGTCCCCAGATGTTCCTACAACCACAGTGACGTaGTTCTCCCTCTTCTCCAGGAAGTACTGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: PVSPDVPTTTVT*FSLFSRKYCRN
Trigger: GTTCCTGCAGTACTTCCTGGAGAAGAGGGAGAAGCACGTCACTGTGGTTGTAGGAACATCTGGGGACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 72 bp TCAGAGAGAGAGAAGTCTCCCTGCTGGACAGTCCTGTaGATGATGTCATTGCGGTTCACTGCCACGACCAGA +
Preference number: 6 (lower is better)
Translates to: SEREKSPCWTVL*MMSLRFTATTR
Trigger: TCTGGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 72 bp TTGTTGGGCTGCTCTATGAGGGCTCCAAGCATGGGATaGAGACCCGGACTACGTGTCCCCTGGGATTTTATA +
Preference number: 6 (lower is better)
Translates to: LLGCSMRAPSMG*RPGLRVPWDFI
Trigger: TATAAAATCCCAGGGGACACGTAGTCCGGGTCTCCATCCCATGCTTGGAGCCCTCATAGAGCAGCCCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS CCA 72 bp CAAATGCCCTTCCCTGGGTGGAAGGAATATCACACCTaGGGCACTGGGAAGGAGGATATGGAACAACTGTCC +
Preference number: 6 (lower is better)
Translates to: QMPFPGWKEYHT*GTGKEDMEQLS
Trigger: GGACAGTTGTTCCATATCCTCCTTCCCAGTGCCCCAGGTGTGATATTCCTTCCACCCAGGGAAGGGCATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS CAA 72 bp CACTGCCACGACCAGACGGATGGGCAGGCCTATCTTTaGAGCAATGTACCCAGCTTAAGACAAGAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: HCHDQTDGQAYL*SNVPSLRQERR
Trigger: CCTCCTCTCTTGTCTTAAGCTGGGTACATTGCTCAAAAGATAGGCCTGCCCATCCGTCTGGTCGTGGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464022.1
CDS CAA 90 bp CTGTCTCTCCCACTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTCACCTGGCT +
Preference number: 6 (lower is better)
Translates to: LSLPLAVQFLGQIHT*GPFKLLHEGSCHLA
Trigger: AGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGTGGGAGAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS TCA 72 bp CCATTCCTCAACCTGGACAGATGGACCACTTCTCTGTaGCGGAATCTGCTGAAGGCTCGGTCGATCAGATCA +
Preference number: 6 (lower is better)
Translates to: PFLNLDRWTTSL*RNLLKARSIRS
Trigger: TGATCTGATCGACCGAGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCATCTGTCCAGGTTGAGGAATGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS TCA 72 bp GCAGATTCACACTTTGGGTCCTTTCAAACTGCTCCATaGGGGCTCTTGTCACCTGGCTGTCAGAGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: ADSHFGSFQTAP*GLLSPGCQSQR
Trigger: TCTCTGGCTCTGACAGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS TCA 72 bp AGGAAGAAAATCAAGTGCTGTTGTTGGGCTGCTCTATaGGGGCTCCAAGCATGGGATGGAGACCCGGACTAC +
Preference number: 6 (lower is better)
Translates to: RKKIKCCCWAAL*GLQAWDGDPDY
Trigger: GTAGTCCGGGTCTCCATCCCATGCTTGGAGCCCTCATAGAGCAGCCCAACAACAGCACTTGATTTTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674282.1
CDS GCA 72 bp GACAGGGACAGGTCCTTAAATGCATATGTGACGCCATaGCACAGCTCCAACACGTTCAGCCCATTCCTCAAC +
Preference number: 6 (lower is better)
Translates to: DRDRSLNAYVTP*HSSNTFSPFLN
Trigger: GTTGAGGAATGGGCTGAACGTGTTGGAGCTGTGGCATGGCGTCACATATGCATTTAAGGACCTGTCCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS GCA 72 bp TCCTTGGGCAGATTCACACTTTGGGTCCTTTCAAACTaGTCCATGAGGGCTCTTGTCACCTGGCTGTCAGAG +
Preference number: 6 (lower is better)
Translates to: SLGRFTLWVLSN*SMRALVTWLSE
Trigger: CTCTGACAGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000464022.1
ENST00000476349.1
ENST00000496165.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 72 bp CTTAAGCGATCCTCCCATCTCAGCCTTTGGAGTAGCTaGGACTACAGAAGCACATCACCATGCCCGGCTAAT +
Preference number: 6 (lower is better)
Translates to: LKRSSHLSLWSS*DYRSTSPCPAN
Trigger: ATTAGCCGGGCATGGTGATGTGCTTCTGTAGTCCCAGCTACTCCAAAGGCTGAGATGGGAGGATCGCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS CCA 72 bp CCCTTGACCAGACTTCCAAACCCCAAGTCTGCTATGTaGCTGTACCCTTTCCTTTCTCTGTGGTGTGTGGGT +
Preference number: 6 (lower is better)
Translates to: PLTRLPNPKSAM*LYPFLSLWCVG
Trigger: ACCCACACACCACAGAGAAAGGAAAGGGTACAGCCACATAGCAGACTTGGGGTTTGGAAGTCTGGTCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476349.1
CDS CAA 90 bp GTAGTGACTGACCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTCACCTGGCT +
Preference number: 6 (lower is better)
Translates to: VVTDLAVQFLGQIHT*GPFKLLHEGSCHLA
Trigger: AGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGGTCAGTCACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476349.1
CDS CAA 90 bp CTCAGCACACACCTCCAAACACATGTACGTTCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAATCTTTGTGCAGTGACCTTTGGGCA +
Preference number: 6 (lower is better)
Translates to: LSTHLQTHVRSASAP*SSGAPESLCSDLWA
Trigger: TGCCCAAAGGTCACTGCACAAAGATTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGAACGTACATGTGTTTGGAGGTGTGTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS TCA 72 bp TACCCTTTCCTTTCTCTGTGGTGTGTGGGTAGTGACTaGCCTTGCTGTGCAGTTCCTTGGGCAGATTCACAC +
Preference number: 6 (lower is better)
Translates to: YPFLSLWCVGSD*PCCAVPWADSH
Trigger: GTGTGAATCTGCCCAAGGAACTGCACAGCAAGGTCAGTCACTACCCACACACCACAGAGAAAGGAAAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476349.1
CDS TCA 72 bp AAAGGCCTTCATAGGACCAGACTTAAACGCTACGACTaGGCTGCCAAAGAAACCATCGCAGGAGTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: KGLHRTRLKRYD*AAKETIAGVRA
Trigger: TGCCCTCACTCCTGCGATGGTTTCTTTGGCAGCTCAGTCGTAGCGTTTAAGTCTGGTCCTATGAAGGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS GCA 72 bp GAACTGTGTTGTGCAGGACAGGGACAGGTCCTTAAATaGATATGTGACGCCATGCCACAGCTCCAACACGTT +
Preference number: 6 (lower is better)
Translates to: ELCCAGQGQVLK*ICDAMPQLQHV
Trigger: AACGTGTTGGAGCTGTGGCATGGCGTCACATATGCATTTAAGGACCTGTCCCTGTCCTGCACAACACAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS GCA 72 bp TCCTCTTCCCTTGACCAGACTTCCAAACCCCAAGTCTaGTATGTGGCTGTACCCTTTCCTTTCTCTGTGGTG +
Preference number: 6 (lower is better)
Translates to: SSSLDQTSKPQV*YVAVPFPFSVV
Trigger: CACCACAGAGAAAGGAAAGGGTACAGCCACATAGCAGACTTGGGGTTTGGAAGTCTGGTCAAGGGAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476349.1
CDS CCA 72 bp CACTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: HLLCSSLGRFTL*VLSNCSMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS CCA 72 bp CGTAGTCCTGTCTCTCCCACTTGCTGTGCAGTTCCTTaGGCAGATTCACACTTTGGGTCCTTTCAAACTGCT +
Preference number: 6 (lower is better)
Translates to: RSPVSPTCCAVP*ADSHFGSFQTA
Trigger: AGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGTGGGAGAGACAGGACTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS CCA 72 bp AGCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: SLLCSSLGRFTL*VLSNCSMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS CCA 72 bp TGCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: CLLCSSLGRFTL*VLSNCSMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000496844.6
ENST00000674282.1
CDS CCA 72 bp ACCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: TLLCSSLGRFTL*VLSNCSMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464022.1
ENST00000476349.1
CDS CCA 72 bp TCCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTTaGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: SLLCSSLGRFTL*VLSNCSMRALV
Trigger: GACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496165.1
CDS CAA 72 bp TGCTTCTTGACAAAAGCCACATCGGCAAACACAGTCTaGATCGGCTCATCGAGCTCATCGCTGTTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: CFLTKATSANTV*IGSSSSSLFPS
Trigger: GGAGGGAAACAGCGATGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCGATGTGGCTTTTGTCAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CAA 72 bp CCACTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: PLAVQFLGQIHT*GPFKLLHEGSC
Trigger: ACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343544.8
CDS CAA 72 bp GTGCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: VLAVQFLGQIHT*GPFKLLHEGSC
Trigger: ACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377254.7
ENST00000496844.6
ENST00000674282.1
CDS CAA 72 bp GACCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: DLAVQFLGQIHT*GPFKLLHEGSC
Trigger: ACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464022.1
ENST00000476349.1
CDS CAA 90 bp TGTTTCCCTCCACTCCAAACACATGTACGTTCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAATCTTTGTGCAGTGACCTTTGGGCA +
Preference number: 6 (lower is better)
Translates to: CFPPLQTHVRSASAP*SSGAPESLCSDLWA
Trigger: TGCCCAAAGGTCACTGCACAAAGATTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGAACGTACATGTGTTTGGAGTGGAGGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CAA 90 bp ACCCGGGACCAGTTGATCGAATTCAGGCTCATCAGATTGTGCTTCTaGACAAAAGCCACATCGGCAAACACAGTCTTGATCGGCTCATCG +
Preference number: 6 (lower is better)
Translates to: TRDQLIEFRLIRLCF*TKATSANTVLIGSS
Trigger: CGATGAGCCGATCAAGACTGTGTTTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAATTCGATCAACTGGTCCCGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CAA 90 bp TGCACCAGGACCCGGGACCAGTTGATCGAATTCAGGCTCATCAGATaGTGCTTCTTGACAAAAGCCACATCGGCAAACACAGTCTTGATC +
Preference number: 6 (lower is better)
Translates to: CTRTRDQLIEFRLIR*CFLTKATSANTVLI
Trigger: GATCAAGACTGTGTTTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAATTCGATCAACTGGTCCCGGGTCCTGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CAA 90 bp CCAATTAGATTCCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGTCACCTGGCT +
Preference number: 6 (lower is better)
Translates to: PIRFLAVQFLGQIHT*GPFKLLHEGSCHLA
Trigger: AGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGGAATCTAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496165.1
CDS GCA 72 bp TGGCGGTGGGGACAGATAATAGCAATAGTAGGCAACTaGCAGCTTGATATCCCTCTTGCTAAGGCGAAAGAC +
Preference number: 6 (lower is better)
Translates to: WRWGQIIAIVGN*QLDIPLAKAKD
Trigger: GTCTTTCGCCTTAGCAAGAGGGATATCAAGCTGGCAGTTGCCTACTATTGCTATTATCTGTCCCCACCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CCA 72 bp ATGCTGGGACAATGGTATAAGCCAGAACTCTCTCTCTaGCAACCTAGGATACAAGGTCACTCCGTATGGGAG +
Preference number: 6 (lower is better)
Translates to: MLGQWYKPELSL*QPRIQGHSVWE
Trigger: CTCCCATACGGAGTGACCTTGTATCCTAGGTTGCCAGAGAGAGAGTTCTGGCTTATACCATTGTCCCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CAA 72 bp CCACTCCAAACACATGTACGTTCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAATCTTTGTGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: PLQTHVRSASAP*SSGAPESLCSD
Trigger: GTCACTGCACAAAGATTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGAACGTACATGTGTTTGGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CAA 72 bp AAGCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: KLAVQFLGQIHT*GPFKLLHEGSC
Trigger: ACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS CAA 72 bp GATGTCACTGCCTCTGAAAGCTTGCTGTGCAGTTCCTaGGGCAGATTCACACTTTGGGTCCTTTCAAACTGC +
Preference number: 6 (lower is better)
Translates to: DVTASESLLCSS*GRFTLWVLSNC
Trigger: GCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCTTTCAGAGGCAGTGACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS CAA 72 bp CACCTCCAAACACATGTACGTTCTGCTTCAGCACCGTaGTCATCTGGAGCTCCTGAATCTTTGTGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: HLQTHVRSASAP*SSGAPESLCSD
Trigger: GTCACTGCACAAAGATTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGAACGTACATGTGTTTGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS CAA 72 bp TTCCTTGCTGTGCAGTTCCTTGGGCAGATTCACACTTaGGGTCCTTTCAAACTGCTCCATGAGGGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: FLAVQFLGQIHT*GPFKLLHEGSC
Trigger: ACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496165.1
CDS CAA 90 bp ATCAGATTGTGCTTCTTGACAAAAGCCACATCGGCAAACACAGTCTaGATCGGCTCATCGAGCTCATCGCTGTTTCCCTCCACTCCAAAC +
Preference number: 6 (lower is better)
Translates to: IRLCFLTKATSANTV*IGSSSSSLFPSTPN
Trigger: GTTTGGAGTGGAGGGAAACAGCGATGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS TCA 72 bp AATAGTTTACTGTGTAGCCAGAACCCTGCCCAGAGCTaGGCCAAGGCATACACACCAACCTCGAATATGATG +
Preference number: 6 (lower is better)
Translates to: NSLLCSQNPAQS*AKAYTPTSNMM
Trigger: CATCATATTCGAGGTTGGTGTGTATGCCTTGGCTCAGCTCTGGGCAGGGTTCTGGCTACACAGTAAACTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS TCA 72 bp TTGGTGCTTAGGGTACAACAAGGACCCTCAGGAGCCTaGATCTTGTGCACTAAAGTCTTGCAACAACTGCAG +
Preference number: 6 (lower is better)
Translates to: LVLRVQQGPSGA*ILCTKVLQQLQ
Trigger: CTGCAGTTGTTGCAAGACTTTAGTGCACAAGATTCAGGCTCCTGAGGGTCCTTGTTGTACCCTAAGCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS CCA 72 bp ATGTCACTGCCTCTGAAAGCTTGCTGTGCAGTTCCTTaGGCAGATTCACACTTTGGGTCCTTTCAAACTGCT +
Preference number: 6 (lower is better)
Translates to: MSLPLKACCAVP*ADSHFGSFQTA
Trigger: AGCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGCTTTCAGAGGCAGTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324166.7
ENST00000674169.1
ENST00000674334.2
CDS CCA 72 bp GTAAGAGTTAGAGCCAACGCAAACTGCCCAAGACCGTaGAGTAACAGAAAGGCCTTCATAGGACCAGACTTA +
Preference number: 6 (lower is better)
Translates to: VRVRANANCPRP*SNRKAFIGPDL
Trigger: TAAGTCTGGTCCTATGAAGGCCTTTCTGTTACTCCACGGTCTTGGGCAGTTTGCGTTGGCTCTAACTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CAA 72 bp CCCAAATCACTTGGCTCAGGTTATGACTCTGCATGGTaGCTGACATACATGACACTTGCAGGTTGGACATGC +
Preference number: 6 (lower is better)
Translates to: PKSLGSGYDSAW*LTYMTLAGWTC
Trigger: GCATGTCCAACCTGCAAGTGTCATGTATGTCAGCAACCATGCAGAGTCATAACCTGAGCCAAGTGATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS TCA 72 bp ATCATGATTCCACCAATCAAAATGAGGCAATTCCACTaGCCTCCTGTCTTCAGGGAGAGGGTATCGGAGCAT +
Preference number: 6 (lower is better)
Translates to: IMIPPIKMRQFH*PPVFRERVSEH
Trigger: ATGCTCCGATACCCTCTCCCTGAAGACAGGAGGTCAGTGGAATTGCCTCATTTTGATTGGTGGAATCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS GCA 72 bp GACCCTCAGGAGCCTGAATCTTGTGCACTAAAGTCTTaGAACAACTGCAGGAAAATGCAGCCAAATATGAGC +
Preference number: 6 (lower is better)
Translates to: DPQEPESCALKS*NNCRKMQPNMS
Trigger: GCTCATATTTGGCTGCATTTTCCTGCAGTTGTTGCAAGACTTTAGTGCACAAGATTCAGGCTCCTGAGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS GCA 72 bp TGCAATTCTGTGGTAAGAGTTAGAGCCAACGCAAACTaGCCAAGACCGTGGAGTAACAGAAAGGCCTTCATA +
Preference number: 6 (lower is better)
Translates to: CNSVVRVRANAN*PRPWSNRKAFI
Trigger: TATGAAGGCCTTTCTGTTACTCCACGGTCTTGGGCAGTTTGCGTTGGCTCTAACTCTTACCACAGAATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS TCA 72 bp TGGACAGATGGACCACTTCTCTGTGACGGAATCTGCTaGAGGCTCGGTCGATCAGATCATTTAATTCATCTT +
Preference number: 6 (lower is better)
Translates to: WTDGPLLCDGIC*RLGRSDHLIHL
Trigger: AAGATGAATTAAATGATCTGATCGACCGAGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCATCTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000419759.5
ENST00000449349.5
ENST00000475910.1
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CCA 72 bp CCAACACCTGCATTAGCTAAACCATGGACTTTTCACTaGCAAGTGTATGCACCTGCTAAAGAACAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: PTPALAKPWTFH*QVYAPAKEQSR
Trigger: TCTGCTCTGTTCTTTAGCAGGTGCATACACTTGCCAGTGAAAAGTCCATGGTTTAGCTAATGCAGGTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS CAA 72 bp AATCCTTCCCAATTAGATTCCTTGCTGTGCAGTTCCTaGGGCAGATTCACACTTTGGGTCCTTTCAAACTGC +
Preference number: 6 (lower is better)
Translates to: NPSQLDSLLCSS*GRFTLWVLSNC
Trigger: GCAGTTTGAAAGGACCCAAAGTGTGAATCTGCCCAAGGAACTGCACAGCAAGGAATCTAATTGGGAAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496165.1
CDS GCA 72 bp TCATACACCCCTTTCAGGGACGTCTCGGTCCACTTCTaGTCAAAAACCAAACATCTTCAATGGTTATTGGAA +
Preference number: 6 (lower is better)
Translates to: SYTPFRDVSVHF*SKTKHLQWLLE
Trigger: TTCCAATAACCATTGAAGATGTTTGGTTTTTGAGCAGAAGTGGACCGAGACGTCCCTGAAAGGGGTGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CAA 72 bp CAGTTGATCGAATTCAGGCTCATCAGATTGTGCTTCTaGACAAAAGCCACATCGGCAAACACAGTCTTGATC +
Preference number: 6 (lower is better)
Translates to: QLIEFRLIRLCF*TKATSANTVLI
Trigger: GATCAAGACTGTGTTTGCCGATGTGGCTTTTGTCAAGAAGCACAATCTGATGAGCCTGAATTCGATCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324166.7
ENST00000343544.8
ENST00000377254.7
ENST00000449349.5
ENST00000496844.6
ENST00000674169.1
ENST00000674282.1
ENST00000674334.2
CDS CAA 90 bp ACAGAGTTTAGGAAACTAGCCCAATGTCTCAGAGCTCACTTGGGATaGAGCTCATTTGACTCTAAACCATGTTCTCTATTACCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: TEFRKLAQCLRAHLG*SSFDSKPCSLLPLL
Trigger: GAGGAGAGGTAATAGAGAACATGGTTTAGAGTCAAATGAGCTCAATCCCAAGTGAGCTCTGAGACATTGGGCTAGTTTCCTAAACTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476349.1
CDS CCA 72 bp TCATCAGATTCCACATTTCTGCCATTACTTTACAACTaGGCACTGTTCTCCAATCCACAAGTCAGGAATGGA +
Preference number: 6 (lower is better)
Translates to: SSDSTFLPLLYN*ALFSNPQVRNG
Trigger: TCCATTCCTGACTTGTGGATTGGAGAACAGTGCCCAGTTGTAAAGTAATGGCAGAAATGTGGAATCTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475910.1
CDS CCA 72 bp ACCATGAATCTTTTGAAAGTGATTATGCTGGGACAATaGTATAAGCCAGAACTCTCTCTCTGGCAACCTAGG +
Preference number: 6 (lower is better)
Translates to: TMNLLKVIMLGQ*YKPELSLWQPR
Trigger: CCTAGGTTGCCAGAGAGAGAGTTCTGGCTTATACCATTGTCCCAGCATAATCACTTTCAAAAGATTCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CAA 72 bp GAGTTTAGGAAACTAGCCCAATGTCTCAGAGCTCACTaGGGATTGAGCTCATTTGACTCTAAACCATGTTCT +
Preference number: 6 (lower is better)
Translates to: EFRKLAQCLRAH*GLSSFDSKPCS
Trigger: AGAACATGGTTTAGAGTCAAATGAGCTCAATCCCAAGTGAGCTCTGAGACATTGGGCTAGTTTCCTAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476349.1
CDS CAA 72 bp AGGAAACTAGCCCAATGTCTCAGAGCTCACTTGGGATaGAGCTCATTTGACTCTAAACCATGTTCTCTATTA +
Preference number: 6 (lower is better)
Translates to: RKLAQCLRAHLG*SSFDSKPCSLL
Trigger: TAATAGAGAACATGGTTTAGAGTCAAATGAGCTCAATCCCAAGTGAGCTCTGAGACATTGGGCTAGTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476349.1
CDS CCA 72 bp ACTTCTGCTCAAAAACCAAACATCTTCAATGGTTATTaGAAACACTGTCTACAGCCTAGTAGTTCTCAACTG +
Preference number: 6 (lower is better)
Translates to: TSAQKPNIFNGY*KHCLQPSSSQL
Trigger: CAGTTGAGAACTACTAGGCTGTAGACAGTGTTTCCAATAACCATTGAAGATGTTTGGTTTTTGAGCAGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674169.1
ENST00000674282.1
CDS CCA 72 bp TATGGTTTTCAATCCATACTTAGCATGTTGTACTGTTaGTATCAGTTTATGCATCTGTCACCTCCAATAGTT +
Preference number: 6 (lower is better)
Translates to: YGFQSILSMLYC*YQFMHLSPPIV
Trigger: AACTATTGGAGGTGACAGATGCATAAACTGATACCAACAGTACAACATGCTAAGTATGGATTGAAAACCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475910.1