RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THEMIS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000130775

Ensembl transcript IDs: ENST00000328928.11, ENST00000373921.8, ENST00000373925.5, ENST00000373927.7, ENST00000427466.1, ENST00000442118.5, ENST00000456990.1, ENST00000466068.1, ENST00000467258.1, ENST00000482828.1, ENST00000492877.1

Found 510 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAG +
Preference number: 1 (lower is better)
Translates to: RWDSWGCRIERNPAS*SASQGSEAEGVTCE
Trigger: CTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR GCA 90 bp GCCAGCTGCTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTaGGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAAT +
Preference number: 1 (lower is better)
Translates to: ASCSASQGSEAEGVT*EMLGPNQPALSSKN
Trigger: ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR CCA 90 bp TACCAGTTTCTGCAGCCTCAGGTCTCCATAAGGGTCTTCTTAAATTaGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCT +
Preference number: 1 (lower is better)
Translates to: YQFLQPQVSIRVFLN*LLLISPPAFGAQGP
Trigger: AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGGCTGCAGAAACTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR CCA 90 bp CTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGC +
Preference number: 1 (lower is better)
Translates to: LSFCETCPRSFRGLK*LAGVGFPEKQQLGS
Trigger: GCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACCTCGGATTCCCCTCTaGATCCACCGGTGGGACAGC +
Preference number: 2 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGPRIPL*IHRWDS
Trigger: GCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGG...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTCTCTGCATCCACCGGTaGGACAGCTGGGGTTGCAGG +
Preference number: 2 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGALCIHR*DSWGCR
Trigger: CCTGCAACCCCAGCTGTCCCACCGGTGGATGCAGAG...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR CAA 90 bp CCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCAAGGTaGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTG +
Preference number: 2 (lower is better)
Translates to: PCSVISIGTALLSPR*MASDSPLHPPVGQL
Trigger: CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGATGCTGTCACCAAGGTTaGTGGCCTCGGATTCCCCTC +
Preference number: 2 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGCCHQG*WPRIPL
Trigger: GAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCA...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGCTTAGAGCTTGGGGGTaGGAGTGGGGGTGGCAGACG +
Preference number: 2 (lower is better)
Translates to: RSIRLGATEMRKTVQASRLRAWG*EWGWQT
Trigger: CGTCTGCCACCCCCACTCTCACCCCCAAGCTCTAAG...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp TGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTTGTGCTCTGCATCCACCGGTaGGACAGCTGGGGTTGCAGG +
Preference number: 2 (lower is better)
Translates to: WLLLISPPAFGAQGPKVVLCIHR*DSWGCR
Trigger: CCTGCAACCCCAGCTGTCCCACCGGTGGATGCAGAG...CACAACCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGAGCTGAGGGAGTCACGTaGGAGATGTTAGGTCCAAAC +
Preference number: 2 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGAEGVT*EMLGPN
Trigger: GTTTGGACCTAACATCTCGCACGTGACTCCCTCAGC...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTTGGGACAGCTGGGGTTaGAGGATTGAGAGGAACCCT +
Preference number: 2 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGAWDSWG*RIERNP
Trigger: AGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCA...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGCACCGGTGGGACAGCTaGGGTTGCAGGATTGAGAGG +
Preference number: 2 (lower is better)
Translates to: RSIRLGATEMRKTVQASRHRWDS*GCRIER
Trigger: CCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGTG...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGTGGTGTCGGATTCCCTaGGAAGCAGCAGTTAGGAAG +
Preference number: 2 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKWCRIP*EAAVRK
Trigger: CTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCA...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTATGGTGTCGGATTCCCTaGGAAGCAGCAGTTAGGAAG +
Preference number: 2 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALWCRIP*EAAVRK
Trigger: CTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCA...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCTTAGAGCTTGGGGGTaGGAGTGGGGGTGGCAGACG +
Preference number: 2 (lower is better)
Translates to: YRSIRLGATEMRKTVQASLRAWG*EWGWQT
Trigger: CGTCTGCCACCCCCACTCTCACCCCCAAGCTCTAAG...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: RSIRLGATEMRKTVQASRRNPAS*SASQGS
Trigger: AGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCT...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCTGGGGTTGCAGGATTaGGAGGAACCCTGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: YRSIRLGATEMRKTVQASLGLQD*EEPCQL
Trigger: CAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAG...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGAAGCTACTCCCCGTCTaGAGCTCAGTTTCTGTGAGA +
Preference number: 2 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKKLLPV*SSVSVR
Trigger: TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTT...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp TCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTGCCTGAAGGAAGCTGGTaGAGTGTCCATCAAATCAGT +
Preference number: 2 (lower is better)
Translates to: SPRLMASDSPLHPPVGQLPEGSW*SVHQIS
Trigger: ACTGATTTGATGGACACTGCACCAGCTTCCTTCAGG...CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTCCTCGGATTCCCCTCTaGATCCACCGGTGGGACAGC +
Preference number: 2 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAAPRIPL*IHRWDS
Trigger: GCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGG...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCCTGGGGTTGCAGGATTaGGAGGAACCCTGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTLGLQD*EEPCQL
Trigger: CAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAG...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp CTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTGCTGTCACCAAGGTTaGTGGCCTCGGATTCCCCTC +
Preference number: 2 (lower is better)
Translates to: LLKLAPPHFTTSFWGPRSCCHQG*WPRIPL
Trigger: GAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCA...GGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR GCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGCCTGAAGGAAGCTGGTaGAGTGTCCATCAAATCAGT +
Preference number: 2 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKPEGSW*SVHQIS
Trigger: ACTGATTTGATGGACACTGCACCAGCTTCCTTCAGG...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGCACCGGTGGGACAGCTaGGGTTGCAGGATTGAGAGG +
Preference number: 2 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKHRWDS*GCRIER
Trigger: CCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGTG...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR GCA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTRNPAS*SASQGS
Trigger: AGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCT...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCTGGGACAGCTGGGGTTaGAGGATTGAGAGGAACCCT +
Preference number: 2 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCWDSWG*RIERNP
Trigger: AGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCA...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp AGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGCTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 2 (lower is better)
Translates to: SWGCRIERNPASCSASQGFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...GCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCCAGTGTGATCAGCATTaGCACTGCGCTGCTGTCACC +
Preference number: 2 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCQCDQH*HCAAVT
Trigger: GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTG...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR CAA 90 bp CTACCAGTTTCTGCAGCCTCAGGTCTCCATAAGGGTCTTCTTAAATaGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: LPVSAASGLHKGLLK*APPHFTTSFWGPRS
Trigger: GGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGGCTGCAGAAACTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR TCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCTGGTGTCGGATTCCCTaGGAAGCAGCAGTTAGGAAG +
Preference number: 2 (lower is better)
Translates to: YRSIRLGATEMRKTVQASWCRIP*EAAVRK
Trigger: CTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCA...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCTGGTGTCGGATTCCCTaGGAAGCAGCAGTTAGGAAG +
Preference number: 2 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLAWCRIP*EAAVRK
Trigger: CTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCA...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGAGTTTCTGTGAGACTTaGCCGAGGTCTTTTAGAGGC +
Preference number: 2 (lower is better)
Translates to: RSIRLGATEMRKTVQASRSFCET*PRSFRG
Trigger: GCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACT...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGCCTGAAGGAAGCTGGTaGAGTGTCCATCAAATCAGT +
Preference number: 2 (lower is better)
Translates to: RSIRLGATEMRKTVQASRPEGSW*SVHQIS
Trigger: ACTGATTTGATGGACACTGCACCAGCTTCCTTCAGG...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCGCTGAGGGAGTCACGTaGGAGATGTTAGGTCCAAAC +
Preference number: 2 (lower is better)
Translates to: YRSIRLGATEMRKTVQASAEGVT*EMLGPN
Trigger: GTTTGGACCTAACATCTCGCACGTGACTCCCTCAGC...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGTGGTGTCGGATTCCCTaGGAAGCAGCAGTTAGGAAG +
Preference number: 2 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKWCRIP*EAAVRK
Trigger: CTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCA...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR GCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTGCTGAGGGAGTCACGTaGGAGATGTTAGGTCCAAAC +
Preference number: 2 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPAEGVT*EMLGPN
Trigger: GTTTGGACCTAACATCTCGCACGTGACTCCCTCAGC...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR GCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTGATCAGCATTGGCACTaGGCTGCTGTCACCAAGGTT +
Preference number: 2 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPDQHWH*AAVTKV
Trigger: AACCTTGGTGACAGCAGCGCAGTGCCAATGCTGATC...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR CCA 90 bp CCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCACAGTGTGATCAGCATTaGCACTGCGCTGCTGTCACC +
Preference number: 2 (lower is better)
Translates to: PQVSIRVFLNWLLLISPPQCDQH*HCAAVT
Trigger: GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTG...TGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR CAA 90 bp AGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTG +
Preference number: 2 (lower is better)
Translates to: SFCETCPRSFRGLKW*AGVGFPEKQQLGSV
Trigger: CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTAGTTTCTGTGAGACTTaGCCGAGGTCTTTTAGAGGC +
Preference number: 2 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAASFCET*PRSFRG
Trigger: GCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACT...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR GCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQRNPAS*SASQGS
Trigger: AGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCT...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCGAACCTGAAGGAAGCTaGTGCAGTGTCCATCAAATC +
Preference number: 2 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTEPEGS*CSVHQI
Trigger: GATTTGATGGACACTGCACCAGCTTCCTTCAGGTTC...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCACTTAGAGCTTGGGGGTaGGAGTGGGGGTGGCAGACG +
Preference number: 2 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSLRAWG*EWGWQT
Trigger: CGTCTGCCACCCCCACTCTCACCCCCAAGCTCTAAG...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR TCA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAACTAAGGTTGTGTTCTTaGAGCCAAGTTCCCACATTA +
Preference number: 2 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQLRLCS*SQVPTL
Trigger: TAATGTGGGAACTTGGCTTCAAGAACACAACCTTAG...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR GCA 90 bp AGCAAGAATCTAGAACCTGAAGGAAGCTGGTGCAGTGTCCATCAAATCAGTTTCAAGCTACTCCCCGTCTaGAGCTCAGTTTCTGTGAGA +
Preference number: 2 (lower is better)
Translates to: SKNLEPEGSWCSVHQISFKLLPV*SSVSVR
Trigger: TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTT...GAAACTGATTTGATGGACACTGCACCAGCTTCCTTCAGGTTCTAGATTCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 2 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR CCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 2 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR CCA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAATTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 2 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR CCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCCCTCCAGCACTTAGATaGTTTTCTGAAATTGCTCAA +
Preference number: 2 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLAPPALR*FSEIAQ
Trigger: TTGAGCAATTTCAGAAAACCATCTAAGTGCTGGAGG...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373925.5
ENST00000373927.7
3UTR-3UTR CCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGCATGTTAACCACATGTaGTTAAACCCCTGTTTACCA +
Preference number: 2 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKHVNHM*LNPCLP
Trigger: TGGTAAACAGGGGTTTAACCACATGTGGTTAACATG...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR GCA 90 bp TCTTGGTTAGTCACTTACAACTTTGACGACTTTAACCACCTGATGAAACCTACCAGTTTCTGTGAGACTTaGCCGAGGTCTTTTAGAGGC +
Preference number: 2 (lower is better)
Translates to: SWLVTYNFDDFNHLMKPTSFCET*PRSFRG
Trigger: GCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACT...GGTAGGTTTCATCAGGTGGTTAAAGTCGTCAAAGTTGTAAGTGACTAACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR GCA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGCTGAGGGAGTCACGTaGGAGATGTTAGGTCCAAAC +
Preference number: 2 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSAEGVT*EMLGPN
Trigger: GTTTGGACCTAACATCTCGCACGTGACTCCCTCAGC...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 2 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CCA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCACCTCCAGCACTTAGATaGTTTTCTGAAATTGCTCAA +
Preference number: 2 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSPPALR*FSEIAQ
Trigger: TTGAGCAATTTCAGAAAACCATCTAAGTGCTGGAGG...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373925.5
ENST00000373927.7
3UTR GCA 72 bp AGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTC +
Preference number: 3 (lower is better)
Translates to: SWGCRIERNPAS*SASQGSEAEGV
Trigger: GACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR GCA 72 bp TCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTaGGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGT +
Preference number: 3 (lower is better)
Translates to: SASQGSEAEGVT*EMLGPNQPALS
Trigger: ACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR TCA 72 bp CCATATACAGATCTATCAGGCTTGGTGCTACAGAGATaGGGAAGACAGTCCAGGCCTCCCGGGGGCTTAGAG +
Preference number: 3 (lower is better)
Translates to: PYTDLSGLVLQR*GRQSRPPGGLE
Trigger: CTCTAAGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTATATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CAA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCT +
Preference number: 3 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPRGLKW*AGVGFP
Trigger: AGGGAATCCGACACCAGCCAACCATTTTAAGCCTCT...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR CCA 72 bp CTGCAGCCTCAGGTCTCCATAAGGGTCTTCTTAAATTaGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCC +
Preference number: 3 (lower is better)
Translates to: LQPQVSIRVFLN*LLLISPPAFGA
Trigger: GGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR-3UTR CAA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCT +
Preference number: 3 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNRGLKW*AGVGFP
Trigger: AGGGAATCCGACACCAGCCAACCATTTTAAGCCTCT...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CAA 90 bp CCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCACTGCTGTCACCAAGGTaGATGGCCTCGGATTCCCCT +
Preference number: 3 (lower is better)
Translates to: PQVSIRVFLNWLLLISPPLLSPR*MASDSP
Trigger: AGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG...TGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR CCA 72 bp TGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: CETCPRSFRGLK*LAGVGFPEKQQ
Trigger: CTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CAA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCT +
Preference number: 3 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKRGLKW*AGVGFP
Trigger: AGGGAATCCGACACCAGCCAACCATTTTAAGCCTCT...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR GCA 72 bp TCCATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTaGAGCTCAGTTTCTGTGAGACTTGCCCGAGGTCTT +
Preference number: 3 (lower is better)
Translates to: SIKSVSTKLLPV*SSVSVRLARGL
Trigger: AAGACCTCGGGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CAA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGCTGGGGTTGCAGGATaGAGAGGAACCCTGCCAGCT +
Preference number: 3 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSAGVAG*RGTLPA
Trigger: AGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGC...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR-3UTR CAA 90 bp TCTTGGTTAGTCACTTACAACTTTGACGACTTTAACCACCTGATGAAACCTACCTTTCACCACCAGCTTTaGGGGCCCAAGGTCCTAAGG +
Preference number: 3 (lower is better)
Translates to: SWLVTYNFDDFNHLMKPTFHHQL*GPKVLR
Trigger: CCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAA...GGTAGGTTTCATCAGGTGGTTAAAGTCGTCAAAGTTGTAAGTGACTAACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGGCCGGGAGGAGGCGGTaGCGTCCTCCACGTCGACCT +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALAGRRR*RPPRRP
Trigger: AGGTCGACGTGGAGGACGTCACCGCCTCCTCCCGGC...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGGCGCGCACGAAGTCCTaGAGCGGCACCGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALARTKS*SGTGSM
Trigger: CATGGAGCCGGTGCCGCTGCAGGACTTCGTGCGCGC...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR GCA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGAGCGCGCACGAAGTCCTaGAGCGGCACCGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGARTKS*SGTGSM
Trigger: CATGGAGCCGGTGCCGCTGCAGGACTTCGTGCGCGC...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR TCA 90 bp TGCTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTGCCGGGAGGAGGCGGTaGCGTCCTCCACGTCGACCT +
Preference number: 4 (lower is better)
Translates to: CSASQGSEAEGVTCEMLGAGRRR*RPPRRP
Trigger: AGGTCGACGTGGAGGACGTCACCGCCTCCTCCCGGC...ACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTGGGGCAGGTGCAGGATaGCCTGCTGACCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGAGAGAG*PADPPC
Trigger: GCATGGAGGGTCAGCAGGTCATCCTGCACCTGCCCC...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGGAGCGGATCCCGAGGTaGATCACCACAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALERIPR*ITTASS
Trigger: GCTTGAGGCTGTGGTGATGCACCTCGGGATCCGCTC...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp AGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGCCTGGGCAGTCAGATCTaGCAGGCTGTAGCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SWGCRIERNPASCSASQGLGSQI*QAVAPA
Trigger: AGCCGGCGCTACAGCCTGGCAGATCTGACTGCCCAG...GCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp AGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGCCCTCGGATTCCCCTCTaGATCCACCGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: SWGCRIERNPASCSASQGPRIPL*IHRWDS
Trigger: GCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGG...GCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGCTGGGGGCGAGCTCCATaGTCTGGCTGGTCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: SWGCRIERNPASCSASQGWGRAP*SGWSSG
Trigger: ACCCGAAGACCAGCCAGACCATGGAGCTCGCCCCCA...GCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp TCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTGGGTCAGTGGGGTGGCTaGTGTCCTTGGCCACCACCT +
Preference number: 4 (lower is better)
Translates to: SPRLMASDSPLHPPVGQLGQWGG*CPWPPP
Trigger: AGGTGGTGGCCAAGGACACCAGCCACCCCACTGACC...CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTGAGAGGGTCAGTGGGGTaGCTGGTGTCCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: SPRLMASDSPLHPPVGQLRGSVG*LVSLAT
Trigger: GGTGGCCAAGGACACCAGCCACCCCACTGACCCTCT...CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTTGTGCGTGGGGAACTCCCTTaGCCGCCGCCGCAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: WLLLISPPAFGAQGPKVVRGELP*PPPQLA
Trigger: GGCAAGCTGCGGCGGCGGCCAAGGGAGTTCCCCACG...CACAACCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR TCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGTGCTGTCACCAAGGTTaGTGGCCTCGGATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALCCHQG*WPRIPL
Trigger: GAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCA...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTACTGGGCAGTCAGATCTaGCAGGCTGTAGCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALLGSQI*QAVAPA
Trigger: AGCCGGCGCTACAGCCTGGCAGATCTGACTGCCCAG...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp CAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCCCTCGGATTCCCCTCTaGATCCACCGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: QGSEAEGVTCEMLGPNQPPRIPL*IHRWDS
Trigger: GCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGG...GGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGCCTCGGATTCCCCTCTaGATCCACCGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKPRIPL*IHRWDS
Trigger: GCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGG...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCTGGGGGCGAGCTCCATaGTCTGGCTGGTCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: QGSEAEGVTCEMLGPNQPWGRAP*SGWSSG
Trigger: ACCCGAAGACCAGCCAGACCATGGAGCTCGCCCCCA...GGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTACAGAAGGGCCCCTTCTaGGATAGGGGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALQKGPF*DRGRCR
Trigger: CCTGCACCTGCCCCTATCCCAGAAGGGGCCCTTCTG...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGAGCGGTTTGATAAAGTaGACGTGCCGGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALSGLIK*TCREEA
Trigger: CGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCT...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp CAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGGTCAGTGGGGTGGCTaGTGTCCTTGGCCACCACCT +
Preference number: 4 (lower is better)
Translates to: QGSEAEGVTCEMLGPNQPGQWGG*CPWPPP
Trigger: AGGTGGTGGCCAAGGACACCAGCCACCCCACTGACC...GGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTACCCCTCTGGCAAGTCTaGCTGCCCCTTGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALPLWQV*LPLGLH
Trigger: GTGAAGGCCAAGGGGCAGCCAGACTTGCCAGAGGGG...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp AGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGCCACCGGTGGGACAGCTaGGGTTGCAGGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SWGCRIERNPASCSASQGHRWDS*GCRIER
Trigger: CCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGTG...GCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGACACCAGGAAGTGCCTaGGCACCTTGCGGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKTPGSA*APCGPC
Trigger: GCAAGGGCCGCAAGGTGCCCAGGCACTTCCTGGTGT...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR TCA 90 bp CAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCCCACCCTGCCCTCTGTaGCAATCCTGTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: QGSEAEGVTCEMLGPNQPPPCPL*QSCGST
Trigger: TGTCGACCCACAGGATTGTCACAGAGGGCAGGGTGG...GGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTATGCAGGATGACCTGCTaGCCCTCCATGCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALCRMTC*PSMPRT
Trigger: TGTCCTGGGCATGGAGGGTCAGCAGGTCATCCTGCA...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCGCCGGGAGGAGGCGGTaGCGTCCTCCACGTCGACCT +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASAGRRR*RPPRRP
Trigger: AGGTCGACGTGGAGGACGTCACCGCCTCCTCCCGGC...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGTCTGGCAAGTCTGGCTaGCCCTTGGCCTTCACAACA +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALSGKSG*PLAFTT
Trigger: TGTTGTGAAGGCCAAGGGGCAGCCAGACTTGCCAGA...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp AGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGCAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SWGCRIERNPASCSASQGRNPAS*SASQGS
Trigger: AGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCT...GCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCGCGGCACCGGCTCCATaGTCCCCGCGGCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFAAPAP*SPRLSG
Trigger: CCCAGAGAGCCGCGGGGACCATGGAGCCGGTGCCGC...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGCGGCACCGGCTCCATaGTCCCCGCGGCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVAAPAP*SPRLSG
Trigger: CCCAGAGAGCCGCGGGGACCATGGAGCCGGTGCCGC...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp TCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTGTTCTGGAGGCGGACCTaGGTGACCTTGATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPRLMASDSPLHPPVGQLFWRRT*VTLIRS
Trigger: GGACCTGATCAAGGTCACCCAGGTCCGCCTCCAGAA...CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGTGGAGCTCTGAGTTGTaGCAGAGACCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALWSSEL*QRPAPP
Trigger: TGGAGGAGCTGGTCTCTGCCACAACTCAGAGCTCCA...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGCAGCAGGACCCGCTCTaGGCTCTCTGCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKQQDPL*ALCLLF
Trigger: AAAGAGGAGGCAGAGAGCCCAGAGCGGGTCCTGCTG...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGATCTAGATCCTGCCTTTaGGGCTTAGCGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGSRSCL*GLAGLW
Trigger: CCACAGGCCCGCTAAGCCCCAAAGGCAGGATCTAGA...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTCACCGGTGGGACAGCTaGGGTTGCAGGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGAHRWDS*GCRIER
Trigger: CCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGTG...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTAGCTGCTTGGAGCTCTaGGTTGTGGCAGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGASCLEL*VVAETS
Trigger: GCTGGTCTCTGCCACAACTCAGAGCTCCAAGCAGCT...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR TCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGCTGCTTGGAGCTCTaGGTTGTGGCAGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALSCLEL*VVAETS
Trigger: GCTGGTCTCTGCCACAACTCAGAGCTCCAAGCAGCT...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR TCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTATCCTGTGGGTCGACATaGAGCAAGTGGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALSCGST*SKWAAA
Trigger: AGCAGCTGCCCACTTGCTTCATGTCGACCCACAGGA...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR TCA 90 bp TGCTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTTGCAGGATGACCTGCTaGCCCTCCATGCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: CSASQGSEAEGVTCEMLGCRMTC*PSMPRT
Trigger: TGTCCTGGGCATGGAGGGTCAGCAGGTCATCCTGCA...ACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTTGCTTGCTGAGGCCCTaGTTTTTAGGGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGACLLRP*FLGGLG
Trigger: ACCCAGGCCCCCTAAAAATCAGGGCCTCAGCAAGCA...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTAGCCCACCCACGGGCTaGGGAAGATGGGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPSPPTG*GRWGGP
Trigger: AGGGCCGCCCCATCTTCCTCAGCCCGTGGGTGGGCT...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR GCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGGCTGAGGGAGTCACGTaGGAGATGTTAGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALAEGVT*EMLGPN
Trigger: GTTTGGACCTAACATCTCGCACGTGACTCCCTCAGC...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp CAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QGSEAEGVTCEMLGPNQPRNPAS*SASQGS
Trigger: AGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCT...GGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGGCGGCACCGGCTCCATaGTCCCCGCGGCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCEAAPAP*SPRLSG
Trigger: CCCAGAGAGCCGCGGGGACCATGGAGCCGGTGCCGC...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTTTCTGGAGGCGGACCTaGGTGACCTTGATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGAFWRRT*VTLIRS
Trigger: GGACCTGATCAAGGTCACCCAGGTCCGCCTCCAGAA...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGGATCCTGTAGGACCTaGAGCAGAGTTCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKGSCRT*SRVRGA
Trigger: TGCCCCTCGAACTCTGCTCCAGGTCCTACAGGATCC...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCACAGCAGGACCCGCTCTaGGCTCTCTGCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPAQQDPL*ALCLLF
Trigger: AAAGAGGAGGCAGAGAGCCCAGAGCGGGTCCTGCTG...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGTCTTCGCCTTGGGTTTaGGCAGCCGAGCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKSSPWV*AAERVA
Trigger: AGCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGA...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACTGTGGCCCTTCCTGTaGGCAGGAATCTTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGLWPFL*AGILLY
Trigger: GTACAGCAAGATTCCTGCCCACAGGAAGGGCCACAG...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGCCACCACCCGGAGTaGCCGGCCTGGCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQGHHPE*PAWLES
Trigger: GCTTTCCAGCCAGGCCGGCCACTCCGGGTGGTGGCC...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR CCA 90 bp TGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTTGTGCCTCACAGTCCTTTGTaGCCACCACCCGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: WLLLISPPAFGAQGPKVVPHSPL*PPPGVA
Trigger: GGCCACTCCGGGTGGTGGCCACAAAGGACTGTGAGG...CACAACCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR TCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGTCCTGCGCATGTGCATaGTGGCTTGGATCTCATACT +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALSCACA*WLGSHT
Trigger: AGTATGAGATCCAAGCCATCATGCACATGCGCAGGA...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTGTGGTGTCGGATTCCCTaGGAAGCAGCAGTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPRLMASDSPLHPPVGQLWCRIP*EAAVRK
Trigger: CTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCA...CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCGCGCGCACGAAGTCCTaGAGCGGCACCGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFARTKS*SGTGSM
Trigger: CATGGAGCCGGTGCCGCTGCAGGACTTCGTGCGCGC...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR GCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCGCGCGCACGAAGTCCTaGAGCGGCACCGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCARTKS*SGTGSM
Trigger: CATGGAGCCGGTGCCGCTGCAGGACTTCGTGCGCGC...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR GCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGTCTGGCAAGTCTGGCTaGCCCTTGGCCTTCACAACA +
Preference number: 4 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKSGKSG*PLAFTT
Trigger: TGTTGTGAAGGCCAAGGGGCAGCCAGACTTGCCAGA...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCCTCGGATTCCCCTCTaGATCCACCGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNPRIPL*IHRWDS
Trigger: GCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGG...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCAAGCGGTTTGATAAAGTaGACGTGCCGGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPASGLIK*TCREEA
Trigger: CGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCT...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGCAGCAGGACCCGCTCTaGGCTCTCTGCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRQQDPL*ALCLLF
Trigger: AAAGAGGAGGCAGAGAGCCCAGAGCGGGTCCTGCTG...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTACTGTGGCCCTTCCTGTaGGCAGGAATCTTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALLWPFL*AGILLY
Trigger: GTACAGCAAGATTCCTGCCCACAGGAAGGGCCACAG...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCACACCGGTGGGACAGCTaGGGTTGCAGGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPHRWDS*GCRIER
Trigger: CCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGTG...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGACTTGAGAAGACCTaGAAGTTGGGGGCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALRLEKT*KLGASS
Trigger: GGAGCTCGCCCCCAACTTCCAGGTCTTCTCAAGTCT...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373927.7
CDS-3UTR TCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCCTTAGAGCTTGGGGGTaGGAGTGGGGGTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLALRAWG*EWGWQT
Trigger: CGTCTGCCACCCCCACTCTCACCCCCAAGCTCTAAG...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp CTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCCTTAGAGCTTGGGGGTaGGAGTGGGGGTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: LLKLAPPHFTTSFWGPRSLRAWG*EWGWQT
Trigger: CGTCTGCCACCCCCACTCTCACCCCCAAGCTCTAAG...GGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTCTTGCGGCCCTTGCTTaGGGCCAGGACCCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLLAALA*GQDPPG
Trigger: CCCTGGCGGGTCCTGGCCTCAAGCAAGGGCCGCAAG...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR TCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCCCACAGCCAGGGACGTaGACTCGGGATTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLAPQPGT*TRDSPP
Trigger: GGGAGGAGAATCCCGAGTTCACGTCCCTGGCTGTGG...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR GCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTCCTGCTGACCCTCCATaGCCAGGACACAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPPADPP*PGHSGQ
Trigger: CTGCCCGCTGTGTCCTGGGCATGGAGGGTCAGCAGG...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCCTGGGCAGTCAGATCTaGCAGGCTGTAGCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLALGSQI*QAVAPA
Trigger: AGCCGGCGCTACAGCCTGGCAGATCTGACTGCCCAG...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGATGTGGGCAGGAATCTTaGTGTACGTACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGCGQES*CTYWSH
Trigger: ATGGCTCCAGTACGTACAGCAAGATTCCTGCCCACA...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp CAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGATCAGCATTGGCACTaGGCTGCTGTCACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: QGSEAEGVTCEMLGPNQPDQHWH*AAVTKV
Trigger: AACCTTGGTGACAGCAGCGCAGTGCCAATGCTGATC...GGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp CCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCACCTTGCGGCCCTTaGTTGAGGCCAGGACCCGCC +
Preference number: 4 (lower is better)
Translates to: PQVSIRVFLNWLLLISPPAPCGP*LRPGPA
Trigger: GGCGGGTCCTGGCCTCAAGCAAGGGCCGCAAGGTGC...TGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR CCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCAGAAGGGCCCCTTCTaGGATAGGGGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASQKGPF*DRGRCR
Trigger: CCTGCACCTGCCCCTATCCCAGAAGGGGCCCTTCTG...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp CAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCCAAGGCAGTGAAAACTaGGCAGTCAGATCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QGSEAEGVTCEMLGPNQPQGSEN*AVRSAR
Trigger: CCTGGCAGATCTGACTGCCCAGTTTTCACTGCCTTG...GGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCATCTAGATCCTGCCTTTaGGGCTTAGCGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPSRSCL*GLAGLW
Trigger: CCACAGGCCCGCTAAGCCCCAAAGGCAGGATCTAGA...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGGAACCTGAAGGAAGCTaGTGCAGTGTCCATCAAATC +
Preference number: 4 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALEPEGS*CSVHQI
Trigger: GATTTGATGGACACTGCACCAGCTTCCTTCAGGTTC...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCCTCTGCATCCACCGGTaGGACAGCTGGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLALCIHR*DSWGCR
Trigger: CCTGCAACCCCAGCTGTCCCACCGGTGGATGCAGAG...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCACAGTGTGATCAGCATTaGCACTGCGCTGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPAQCDQH*HCAAVT
Trigger: GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTG...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp CTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTGCAGGATGACCTGCTaGCCCTCCATGCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LLKLAPPHFTTSFWGPRSCRMTC*PSMPRT
Trigger: TGTCCTGGGCATGGAGGGTCAGCAGGTCATCCTGCA...GGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGGGGGCAGGTGCAGGATaGCCTGCTGACCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCEGAGAG*PADPPC
Trigger: GCATGGAGGGTCAGCAGGTCATCCTGCACCTGCCCC...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCACCTTGGCCACCACCTTaGCCTCACAAGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPPWPPP*PHKAVK
Trigger: TTTCACTGCCTTGTGAGGTCAAGGTGGTGGCCAAGG...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTTGTGCCAAGAATGGCTCTGTaGTCTTCTCCTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: WLLLISPPAFGAQGPKVVPRMAL*SSPPAA
Trigger: TGCGGCTGGAGGAGAAGATCACAGAGCCATTCTTGG...CACAACCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TGCTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTTGGTGTCGGATTCCCTaGGAAGCAGCAGTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: CSASQGSEAEGVTCEMLGWCRIP*EAAVRK
Trigger: CTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCA...ACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATTGCTGTCACCAAGGTTaGTGGCCTCGGATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNCCHQG*WPRIPL
Trigger: GAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCA...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTCTTAGAGCTTGGGGGTaGGAGTGGGGGTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPLRAWG*EWGWQT
Trigger: CGTCTGCCACCCCCACTCTCACCCCCAAGCTCTAAG...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGTCTCCTCCACGAAACTaGCAGGGAAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRSPPRN*QGSGRA
Trigger: TGCCCTTCCACTTCCCTGGCAGTTTCGTGGAGGAGA...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTATGTGGGCAGGAATCTTaGTGTACGTACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALCGQES*CTYWSH
Trigger: ATGGCTCCAGTACGTACAGCAAGATTCCTGCCCACA...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCATCATCATCTAGATCCTaGCTTTGGGGCTTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPASSSRS*LWGLAG
Trigger: GCCCGCTAAGCCCCAAAGGCAGGATCTAGATGATGA...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNRNPAS*SASQGS
Trigger: AGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCT...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGTGGGACAGCTGGGGTTaGAGGATTGAGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRWDSWG*RIERNP
Trigger: AGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCA...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCAGATCAGCATTGGCACTaGGCTGCTGTCACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPADQHWH*AAVTKV
Trigger: AACCTTGGTGACAGCAGCGCAGTGCCAATGCTGATC...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATTTCTGGAGGCGGACCTaGGTGACCTTGATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNFWRRT*VTLIRS
Trigger: GGACCTGATCAAGGTCACCCAGGTCCGCCTCCAGAA...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp TGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTTGTGTGGAGCTCTGAGTTGTaGCAGAGACCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WLLLISPPAFGAQGPKVVWSSEL*QRPAPP
Trigger: TGGAGGAGCTGGTCTCTGCCACAACTCAGAGCTCCA...CACAACCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp TCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTGTCTGTGACAATCCTGTaGGTCGACATGAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SPRLMASDSPLHPPVGQLSVTIL*VDMKQV
Trigger: CACTTGCTTCATGTCGACCCACAGGATTGTCACAGA...CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCAGAAGGGCCCCTTCTaGGATAGGGGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCQKGPF*DRGRCR
Trigger: CCTGCACCTGCCCCTATCCCAGAAGGGGCCCTTCTG...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGCTTGGATCTCATACTaGGGCCGCAGGATCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRAWISY*GRRIRE
Trigger: TTCCCTGATCCTGCGGCCCCAGTATGAGATCCAAGC...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp TGCTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCAAGGCAGTGAAAACTaGGCAGTCAGATCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CSASQGSEAEGVTCEMLGQGSEN*AVRSAR
Trigger: CCTGGCAGATCTGACTGCCCAGTTTTCACTGCCTTG...ACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTGGTCAGTGGGGTGGCTaGTGTCCTTGGCCACCACCT +
Preference number: 4 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPGQWGG*CPWPPP
Trigger: AGGTGGTGGCCAAGGACACCAGCCACCCCACTGACC...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCAGAGGGTCAGTGGGGTaGCTGGTGTCCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCRGSVG*LVSLAT
Trigger: GGTGGCCAAGGACACCAGCCACCCCACTGACCCTCT...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCAGAGGGTCAGTGGGGTaGCTGGTGTCCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTRGSVG*LVSLAT
Trigger: GGTGGCCAAGGACACCAGCCACCCCACTGACCCTCT...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCCCCCTCTGGCAAGTCTaGCTGCCCCTTGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTPLWQV*LPLGLH
Trigger: GTGAAGGCCAAGGGGCAGCCAGACTTGCCAGAGGGG...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCAAGGTCTTCGCCTTaGGTTTGGGCAGCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCARSSP*VWAAER
Trigger: ACGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGC...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCGCAAGGTCTTCGCCTTaGGTTTGGGCAGCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASARSSP*VWAAER
Trigger: ACGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGC...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGCTGTGGCCCTTCCTGTaGGCAGGAATCTTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRLWPFL*AGILLY
Trigger: GTACAGCAAGATTCCTGCCCACAGGAAGGGCCACAG...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAACTCTGCATCCACCGGTaGGACAGCTGGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQLCIHR*DSWGCR
Trigger: CCTGCAACCCCAGCTGTCCCACCGGTGGATGCAGAG...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGCTCTGCATCCACCGGTaGGACAGCTGGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVLCIHR*DSWGCR
Trigger: CCTGCAACCCCAGCTGTCCCACCGGTGGATGCAGAG...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTTGTGAGAAGACCTGGAAGTTaGGGGCGAGCTCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: WLLLISPPAFGAQGPKVVRRPGS*GRAPWS
Trigger: AGACCATGGAGCTCGCCCCCAACTTCCAGGTCTTCT...CACAACCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373927.7
CDS-3UTR CCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTTCATCCTCCCCAGCCTaGTCACTCAGCCGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPSSSPA*SLSRSL
Trigger: GAGCGAGCGGCTGAGTGACCAGGCTGGGGAGGATGA...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456990.1
CDS-3UTR TCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCCACCCTGCCCTCTGTaGCAATCCTGTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCPPCPL*QSCGST
Trigger: TGTCGACCCACAGGATTGTCACAGAGGGCAGGGTGG...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGCCACCCTGCCCTCTGTaGCAATCCTGTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKPPCPL*QSCGST
Trigger: TGTCGACCCACAGGATTGTCACAGAGGGCAGGGTGG...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCCCACAGCCTCAAGCATaGGGAGCTGGTCCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCPQPQA*GAGPQS
Trigger: TGACTGAGGACCAGCTCCTCATGCTTGAGGCTGTGG...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCTGCAGGATGACCTGCTaGCCCTCCATGCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCCRMTC*PSMPRT
Trigger: TGTCCTGGGCATGGAGGGTCAGCAGGTCATCCTGCA...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp CTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGGGCAGGTGCAGGATaGCCTGCTGACCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: LSFCETCPRSFRGLKWLAGAGAG*PADPPC
Trigger: GCATGGAGGGTCAGCAGGTCATCCTGCACCTGCCCC...AGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGACCTCACAAGGCAGTaGAAACTGGGCAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRDLTRQ*KLGSQI
Trigger: GATCTGACTGCCCAGTTTTCACTGCCTTGTGAGGTC...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCTGCTGTCACCAAGGTTaGTGGCCTCGGATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASCCHQG*WPRIPL
Trigger: GAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCA...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTCCTGCTGACCCTCCATaGCCAGGACACAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLPADPP*PGHSGQ
Trigger: CTGCCCGCTGTGTCCTGGGCATGGAGGGTCAGCAGG...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp ATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACCTGCTGACCCTCCATaGCCAGGACACAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: IKSVSTKLLPVCSSVSVRPADPP*PGHSGQ
Trigger: CTGCCCGCTGTGTCCTGGGCATGGAGGGTCAGCAGG...TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCTTGATAAAGTGGACGTaGCGGGAGGAGGCGGTGACG +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLALIKWT*REEAVT
Trigger: CGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAA...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASRNPAS*SASQGS
Trigger: AGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCT...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATTGGGACAGCTGGGGTTaGAGGATTGAGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNWDSWG*RIERNP
Trigger: AGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCA...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGCCTCGGATTCCCCTCTaGATCCACCGGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCEPRIPL*IHRWDS
Trigger: GCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGG...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp AGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGCATCTATCAGGCTTGGTaGTACAGAGATGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SWGCRIERNPASCSASQGIYQAW*YRDEED
Trigger: GTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGAT...GCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCGAGCTCCATGGTCTaGCTGGTCTTCGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCASSMV*LVFGFS
Trigger: TGAGAACCCGAAGACCAGCCAGACCATGGAGCTCGC...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTATCTGTGACAATCCTGTaGGTCGACATGAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALSVTIL*VDMKQV
Trigger: CACTTGCTTCATGTCGACCCACAGGATTGTCACAGA...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCTCTTCGCCTTGGGTTTaGGCAGCCGAGCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLASSPWV*AAERVA
Trigger: AGCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGA...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTGCAAGGTCTTCGCCTTaGGTTTGGGCAGCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPARSSP*VWAAER
Trigger: ACGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGC...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCGCAAGGTCTTCGCCTTaGGTTTGGGCAGCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCARSSP*VWAAER
Trigger: ACGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGC...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCAATCCTTGATGAACTCTaGCAAGGTCTTCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPAILDEL*QGLRLG
Trigger: CCCAAGGCGAAGACCTTGCCAGAGTTCATCAAGGAT...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGAACCTGAAGGAAGCTaGTGCAGTGTCCATCAAATC +
Preference number: 4 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKEPEGS*CSVHQI
Trigger: GATTTGATGGACACTGCACCAGCTTCCTTCAGGTTC...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTGAACCTGAAGGAAGCTaGTGCAGTGTCCATCAAATC +
Preference number: 4 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGAEPEGS*CSVHQI
Trigger: GATTTGATGGACACTGCACCAGCTTCCTTCAGGTTC...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTCACCGGTGGGACAGCTaGGGTTGCAGGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPHRWDS*GCRIER
Trigger: CCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGTG...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAACACCGGTGGGACAGCTaGGGTTGCAGGATTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQHRWDS*GCRIER
Trigger: CCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGTG...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGCTCTGCATCCACCGGTaGGACAGCTGGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCELCIHR*DSWGCR
Trigger: CCTGCAACCCCAGCTGTCCCACCGGTGGATGCAGAG...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGAGCTGCTTGGAGCTCTaGGTTGTGGCAGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKSCLEL*VVAETS
Trigger: GCTGGTCTCTGCCACAACTCAGAGCTCCAAGCAGCT...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR TCA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGTCCTGTGGGTCGACATaGAGCAAGTGGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVSCGST*SKWAAA
Trigger: AGCAGCTGCCCACTTGCTTCATGTCGACCCACAGGA...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR TCA 90 bp TACCAGTTTCTGCAGCCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCCACCCTGCCCTCTGTaGCAATCCTGTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: YQFLQPQVSIRVFLNWLLPPCPL*QSCGST
Trigger: TGTCGACCCACAGGATTGTCACAGAGGGCAGGGTGG...GAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGGCTGCAGAAACTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCCCACAGCCTCAAGCATaGGGAGCTGGTCCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFPQPQA*GAGPQS
Trigger: TGACTGAGGACCAGCTCCTCATGCTTGAGGCTGTGG...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGCCACAGCCTCAAGCATaGGGAGCTGGTCCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKPQPQA*GAGPQS
Trigger: TGACTGAGGACCAGCTCCTCATGCTTGAGGCTGTGG...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCCCTTGGCCACCACCTTaGCCTCACAAGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCPWPPP*PHKAVK
Trigger: TTTCACTGCCTTGTGAGGTCAAGGTGGTGGCCAAGG...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTTGCTTGCTGAGGCCCTaGTTTTTAGGGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAACLLRP*FLGGLG
Trigger: ACCCAGGCCCCCTAAAAATCAGGGCCTCAGCAAGCA...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCTGCTTGCTGAGGCCCTaGTTTTTAGGGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTCLLRP*FLGGLG
Trigger: ACCCAGGCCCCCTAAAAATCAGGGCCTCAGCAAGCA...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGCTGGGGTTGCAGGATTaGGAGGAACCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCELGLQD*EEPCQL
Trigger: CAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAG...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGTGCTGTCACCAAGGTTaGTGGCCTCGGATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVCCHQG*WPRIPL
Trigger: GAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCA...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp ATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTAGAGCTTGGGGGTaGGAGTGGGGGTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: IKSVSTKLLPVCSSVSVRLRAWG*EWGWQT
Trigger: CGTCTGCCACCCCCACTCTCACCCCCAAGCTCTAAG...TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACTAAGGTTGTGTTCTTaGAGCCAAGTTCCCACATTA +
Preference number: 4 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGLRLCS*SQVPTL
Trigger: TAATGTGGGAACTTGGCTTCAAGAACACAACCTTAG...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp AGCAAGAATCTAGAACCTGAAGGAAGCTGGTGCAGTGTCCATCAAATCAGTTTCGCCTTGGTAGCCCCCTaGCACCAGGAAGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SKNLEPEGSWCSVHQISFALVAP*HQEVPG
Trigger: CCCAGGCACTTCCTGGTGTCAGGGGGCTACCAAGGC...GAAACTGATTTGATGGACACTGCACCAGCTTCCTTCAGGTTCTAGATTCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR GCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCTTGATAAAGTGGACGTaGCGGGAGGAGGCGGTGACG +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFLIKWT*REEAVT
Trigger: CGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAA...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCCCGCTCTGGGCTCTCTaGCTCCTCTTTGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFPLWAL*LLFALF
Trigger: GAAGAGTGCAAAGAGGAGGCAGAGAGCCCAGAGCGG...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGTGTGGGCAGGAATCTTaGTGTACGTACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRCGQES*CTYWSH
Trigger: ATGGCTCCAGTACGTACAGCAAGATTCCTGCCCACA...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATTCATCATCTAGATCCTaGCTTTGGGGCTTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNSSSRS*LWGLAG
Trigger: GCCCGCTAAGCCCCAAAGGCAGGATCTAGATGATGA...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCAAGTTTCTGTGAGACTTaGCCGAGGTCTTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPASFCET*PRSFRG
Trigger: GCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACT...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGAAGCTACTCCCCGTCTaGAGCTCAGTTTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRKLLPV*SSVSVR
Trigger: TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTT...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAAAGCTACTCCCCGTCTaGAGCTCAGTTTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPKLLPV*SSVSVR
Trigger: TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTT...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTAGGAACCCTGCCAGCTaGTCTGCATCCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPRNPAS*SASQGS
Trigger: AGAGCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCT...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGGCCGCCGCCGCAGCTTaGCTTGGTAGCCCCCTGACA +
Preference number: 4 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQAAAAA*LGSPLT
Trigger: TGTCAGGGGGCTACCAAGGCAAGCTGCGGCGGCGGC...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR CCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTGCGAGCTCCATGGTCTaGCTGGTCTTCGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPASSMV*LVFGFS
Trigger: TGAGAACCCGAAGACCAGCCAGACCATGGAGCTCGC...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCAGTAGCCCTGGAAGTTaGGGGCGAGCTCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTSSPGS*GRAPWS
Trigger: AGACCATGGAGCTCGCCCCCAACTTCCAGGGCTACT...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGAGTAGCCCTGGAAGTTaGGGGCGAGCTCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKSSPGS*GRAPWS
Trigger: AGACCATGGAGCTCGCCCCCAACTTCCAGGGCTACT...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCAAGTGGGCAGCTGCTTaGAGCTCTGAGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCKWAAA*SSELWQ
Trigger: CTGCCACAACTCAGAGCTCCAAGCAGCTGCCCACTT...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCAAGTGGGCAGCTGCTTaGAGCTCTGAGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASKWAAA*SSELWQ
Trigger: CTGCCACAACTCAGAGCTCCAAGCAGCTGCCCACTT...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTCAGAAGGGCCCCTTCTaGGATAGGGGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLQKGPF*DRGRCR
Trigger: CCTGCACCTGCCCCTATCCCAGAAGGGGCCCTTCTG...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCGGATCCTGTAGGACCTaGAGCAGAGTTCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCGSCRT*SRVRGA
Trigger: TGCCCCTCGAACTCTGCTCCAGGTCCTACAGGATCC...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCGCTTGGATCTCATACTaGGGCCGCAGGATCAGGGAA +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASAWISY*GRRIRE
Trigger: TTCCCTGATCCTGCGGCCCCAGTATGAGATCCAAGC...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp CTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTTCATCCTCCCCAGCCTaGTCACTCAGCCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSFCETCPRSFRGLKWLASSSPA*SLSRSR
Trigger: CCTGGAGCGGCTGAGTGACCAGGCTGGGGAGGATGA...AGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328928.11
CDS-3UTR CCA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTTCTAGATCCTGCCTTTaGGGCTTAGCGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPSRSCL*GLAGLW
Trigger: CCACAGGCCCGCTAAGCCCCAAAGGCAGGATCTAGA...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTTCTAGATCCTGCCTTTaGGGCTTAGCGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPSRSCL*GLAGLW
Trigger: CCACAGGCCCGCTAAGCCCCAAAGGCAGGATCTAGA...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp TCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTGTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 4 (lower is better)
Translates to: SPRLMASDSPLHPPVGQLFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCCAGTGTGATCAGCATTaGCACTGCGCTGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLAQCDQH*HCAAVT
Trigger: GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTG...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CTGCAGCTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGAGTGGCCGGCCTGGCTaGAAAGCACCTAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LQLSFCETCPRSFRGLKWSGRPG*KAPRRS
Trigger: TGACCTCCTAGGTGCTTTCCAGCCAGGCCGGCCACT...CCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR CCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGTCCACGTCACTGCCCTaGGCCCCATGGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQSTSLP*APWAWP
Trigger: TGGCCAGGCCCATGGGGCCCAGGGCAGTGACGTGGA...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR TCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGGGGGCAGGTGCAGGATaGCCTGCTGACCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQGAGAG*PADPPC
Trigger: GCATGGAGGGTCAGCAGGTCATCCTGCACCTGCCCC...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATTCCTGCGCATGTGCATaGTGGCTTGGATCTCATACT +
Preference number: 4 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNSCACA*WLGSHT
Trigger: AGTATGAGATCCAAGCCATCATGCACATGCGCAGGA...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGCCTTGGCCACCACCTTaGCCTCACAAGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVPWPPP*PHKAVK
Trigger: TTTCACTGCCTTGTGAGGTCAAGGTGGTGGCCAAGG...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCCCAAGAATGGCTCTGTaGTCTTCTCCTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFPRMAL*SSPPAA
Trigger: TGCGGCTGGAGGAGAAGATCACAGAGCCATTCTTGG...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp CTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTCTGGGGTTGCAGGATTaGGAGGAACCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSFCETCPRSFRGLKWLALGLQD*EEPCQL
Trigger: CAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAG...AGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp CTGCAGCTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTGCTGTCACCAAGGTTaGTGGCCTCGGATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LQLSFCETCPRSFRGLKWCCHQG*WPRIPL
Trigger: GAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCA...CCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp CAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCCTAAGGTTGTGTTCTTaGAGCCAAGTTCCCACATTA +
Preference number: 4 (lower is better)
Translates to: QGSEAEGVTCEMLGPNQPLRLCS*SQVPTL
Trigger: TAATGTGGGAACTTGGCTTCAAGAACACAACCTTAG...GGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGCCTGCTGACCCTCCATaGCCAGGACACAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQPADPP*PGHSGQ
Trigger: CTGCCCGCTGTGTCCTGGGCATGGAGGGTCAGCAGG...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCTGGGACAGCTGGGGTTaGAGGATTGAGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFWDSWG*RIERNP
Trigger: AGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCA...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGTGGGACAGCTGGGGTTaGAGGATTGAGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVWDSWG*RIERNP
Trigger: AGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCA...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGATCAGCATTGGCACTaGGCTGCTGTCACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCDQHWH*AAVTKV
Trigger: AACCTTGGTGACAGCAGCGCAGTGCCAATGCTGATC...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TACCAGTTTCTGCAGCCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCGCGAGCTCCATGGTCTaGCTGGTCTTCGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: YQFLQPQVSIRVFLNWLLASSMV*LVFGFS
Trigger: TGAGAACCCGAAGACCAGCCAGACCATGGAGCTCGC...GAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGGCTGCAGAAACTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCTGGAGCTCTGAGTTGTaGCAGAGACCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFWSSEL*QRPAPP
Trigger: TGGAGGAGCTGGTCTCTGCCACAACTCAGAGCTCCA...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGAAGTGGGCAGCTGCTTaGAGCTCTGAGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKKWAAA*SSELWQ
Trigger: CTGCCACAACTCAGAGCTCCAAGCAGCTGCCCACTT...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGGGATCCTGTAGGACCTaGAGCAGAGTTCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCEGSCRT*SRVRGA
Trigger: TGCCCCTCGAACTCTGCTCCAGGTCCTACAGGATCC...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCATGTGCATGATGGCTTaGATCTCATACTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASMCMMA*ISYWGR
Trigger: GCGGCCCCAGTATGAGATCCAAGCCATCATGCACAT...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp TACCAGTTTCTGCAGCCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCAGCGGTTTGATAAAGTaGACGTGCCGGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: YQFLQPQVSIRVFLNWLLSGLIK*TCREEA
Trigger: CGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCT...GAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGGCTGCAGAAACTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAGTCTGGCTGCCCCTTaGCCTTCACAACAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPSLAAP*PSQQSG
Trigger: ACCTGACTGTTGTGAAGGCCAAGGGGCAGCCAGACT...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp CTGCAGCTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTCTTCGCCTTGGGTTTaGGCAGCCGAGCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LQLSFCETCPRSFRGLKWSSPWV*AAERVA
Trigger: AGCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGA...CCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGAGCAAGGTCTTCGCCTTaGGTTTGGGCAGCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: IKSVSTKLLPVCSSVSVRARSSP*VWAAER
Trigger: ACGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGC...TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCTGTGGCCCTTCCTGTaGGCAGGAATCTTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCLWPFL*AGILLY
Trigger: GTACAGCAAGATTCCTGCCCACAGGAAGGGCCACAG...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTCAGTGTGATCAGCATTaGCACTGCGCTGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAAQCDQH*HCAAVT
Trigger: GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTG...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACATGTTAACCACATGTaGTTAAACCCCTGTTTACCA +
Preference number: 4 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGHVNHM*LNPCLP
Trigger: TGGTAAACAGGGGTTTAACCACATGTGGTTAACATG...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGAGGGTCTTCTTAAATTaGCTCCTCCTCATTTCACCA +
Preference number: 4 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKRVFLN*LLLISP
Trigger: TGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp CTGCAGCTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGCCAAGAATGGCTCTGTaGTCTTCTCCTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LQLSFCETCPRSFRGLKWPRMAL*SSPPAA
Trigger: TGCGGCTGGAGGAGAAGATCACAGAGCCATTCTTGG...CCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp AGCAAGAATCTAGAACCTGAAGGAAGCTGGTGCAGTGTCCATCAAATCAGTTTCCTGGGGTTGCAGGATTaGGAGGAACCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKNLEPEGSWCSVHQISFLGLQD*EEPCQL
Trigger: CAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAG...GAAACTGATTTGATGGACACTGCACCAGCTTCCTTCAGGTTCTAGATTCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGCTTAGAGCTTGGGGGTaGGAGTGGGGGTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQLRAWG*EWGWQT
Trigger: CGTCTGCCACCCCCACTCTCACCCCCAAGCTCTAAG...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp CCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCATCTGGCAAGTCTGGCTaGCCCTTGGCCTTCACAACA +
Preference number: 4 (lower is better)
Translates to: PQVSIRVFLNWLLLISPPSGKSG*PLAFTT
Trigger: TGTTGTGAAGGCCAAGGGGCAGCCAGACTTGCCAGA...TGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGTCATCATCTAGATCCTaGCTTTGGGGCTTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVSSSRS*LWGLAG
Trigger: GCCCGCTAAGCCCCAAAGGCAGGATCTAGATGATGA...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCTCATCATCTAGATCCTaGCTTTGGGGCTTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFSSSRS*LWGLAG
Trigger: GCCCGCTAAGCCCCAAAGGCAGGATCTAGATGATGA...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGTCATCATCTAGATCCTaGCTTTGGGGCTTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKSSSRS*LWGLAG
Trigger: GCCCGCTAAGCCCCAAAGGCAGGATCTAGATGATGA...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCAAGCTACTCCCCGTCTaGAGCTCAGTTTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASKLLPV*SSVSVR
Trigger: TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTT...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCCTGAAGGAAGCTGGTaGAGTGTCCATCAAATCAGT +
Preference number: 4 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNPEGSW*SVHQIS
Trigger: ACTGATTTGATGGACACTGCACCAGCTTCCTTCAGG...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCGCTGAGGGAGTCACGTaGGAGATGTTAGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFAEGVT*EMLGPN
Trigger: GTTTGGACCTAACATCTCGCACGTGACTCCCTCAGC...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGTGGGACAGCTGGGGTTaGAGGATTGAGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCEWDSWG*RIERNP
Trigger: AGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCA...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTGATCAGCATTGGCACTaGGCTGCTGTCACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPDQHWH*AAVTKV
Trigger: AACCTTGGTGACAGCAGCGCAGTGCCAATGCTGATC...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGAGCGAGCTCCATGGTCTaGCTGGTCTTCGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: IKSVSTKLLPVCSSVSVRASSMV*LVFGFS
Trigger: TGAGAACCCGAAGACCAGCCAGACCATGGAGCTCGC...TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp ATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGAAGTAGCCCTGGAAGTTaGGGGCGAGCTCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: IKSVSTKLLPVCSSVSVRSSPGS*GRAPWS
Trigger: AGACCATGGAGCTCGCCCCCAACTTCCAGGGCTACT...TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGATGTGCATGATGGCTTaGATCTCATACTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVMCMMA*ISYWGR
Trigger: GCGGCCCCAGTATGAGATCCAAGCCATCATGCACAT...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCAAGGCAGTGAAAACTaGGCAGTCAGATCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCQGSEN*AVRSAR
Trigger: CCTGGCAGATCTGACTGCCCAGTTTTCACTGCCTTG...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCGCTCACCACCAAGAATaGCTCTGTGATCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASAHHQE*LCDLLL
Trigger: GAGGAGAAGATCACAGAGCCATTCTTGGTGGTGAGC...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp CCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAAGTCTGGCTGCCCCTTaGCCTTCACAACAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PQVSIRVFLNWLLLISPPSLAAP*PSQQSG
Trigger: ACCTGACTGTTGTGAAGGCCAAGGGGCAGCCAGACT...TGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp CTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTTCTTCGCCTTGGGTTTaGGCAGCCGAGCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSFCETCPRSFRGLKWLASSPWV*AAERVA
Trigger: AGCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGA...AGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCATCCTTGATGAACTCTaGCAAGGTCTTCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLAILDEL*QGLRLG
Trigger: CCCAAGGCGAAGACCTTGCCAGAGTTCATCAAGGAT...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCATCCTTGATGAACTCTaGCAAGGTCTTCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLKLAPPHFTTSFWGPRSILDEL*QGLRLG
Trigger: CCCAAGGCGAAGACCTTGCCAGAGTTCATCAAGGAT...GGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTTCTAGATCCTGCCTTTaGGGCTTAGCGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLSRSCL*GLAGLW
Trigger: CCACAGGCCCGCTAAGCCCCAAAGGCAGGATCTAGA...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGCTCTGCATCCACCGGTaGGACAGCTGGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQLCIHR*DSWGCR
Trigger: CCTGCAACCCCAGCTGTCCCACCGGTGGATGCAGAG...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
3UTR CAA 72 bp TCTGCAGCCTCAGGTCTCCATAAGGGTCTTCTTAAATaGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SAASGLHKGLLK*APPHFTTSFWG
Trigger: GCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCTCCTGCGCATGTGCATaGTGGCTTGGATCTCATACT +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFSCACA*WLGSHT
Trigger: AGTATGAGATCCAAGCCATCATGCACATGCGCAGGA...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGTGCAATCCTAAGACTTaGGAAGACTTGACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKCNPKT*EDLTPP
Trigger: GGGAGGCGTCAAGTCTTCTCAAGTCTTAGGATTGCA...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTTGCAATCCTAAGACTTaGGAAGACTTGACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPCNPKT*EDLTPP
Trigger: GGGAGGCGTCAAGTCTTCTCAAGTCTTAGGATTGCA...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCACTAAGGTTGTGTTCTTaGAGCCAAGTTCCCACATTA +
Preference number: 4 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPLRLCS*SQVPTL
Trigger: TAATGTGGGAACTTGGCTTCAAGAACACAACCTTAG...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTTGGTCACTCAGCCGCTaGCAAACCAAGACATCCACG +
Preference number: 4 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLWSLSR*QTKTST
Trigger: CGTGGATGTCTTGGTTTGTCAGCGGCTGAGTGACCA...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR GCA 90 bp AGCAAGAATCTAGAACCTGAAGGAAGCTGGTGCAGTGTCCATCAAATCAGTTTCCCGCTCTGGGCTCTCTaGCTCCTCTTTGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: SKNLEPEGSWCSVHQISFPLWAL*LLFALF
Trigger: GAAGAGTGCAAAGAGGAGGCAGAGAGCCCAGAGCGG...GAAACTGATTTGATGGACACTGCACCAGCTTCCTTCAGGTTCTAGATTCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp CTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTTCTCCTCCACGAAACTaGCAGGGAAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSFCETCPRSFRGLKWLASPPRN*QGSGRA
Trigger: TGCCCTTCCACTTCCCTGGCAGTTTCGTGGAGGAGA...AGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTTCTCCTCCACGAAACTaGCAGGGAAGTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLSPPRN*QGSGRA
Trigger: TGCCCTTCCACTTCCCTGGCAGTTTCGTGGAGGAGA...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGAAGCTACTCCCCGTCTaGAGCTCAGTTTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKKLLPV*SSVSVR
Trigger: TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTT...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCAAGCTACTCCCCGTCTaGAGCTCAGTTTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTKLLPV*SSVSVR
Trigger: TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTT...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp CTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCCCTGAAGGAAGCTGGTaGAGTGTCCATCAAATCAGT +
Preference number: 4 (lower is better)
Translates to: LLKLAPPHFTTSFWGPRSPEGSW*SVHQIS
Trigger: ACTGATTTGATGGACACTGCACCAGCTTCCTTCAGG...GGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp CTGCAGCTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGGCTGAGGGAGTCACGTaGGAGATGTTAGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LQLSFCETCPRSFRGLKWAEGVT*EMLGPN
Trigger: GTTTGGACCTAACATCTCGCACGTGACTCCCTCAGC...CCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAACAGAGATCTCATAGATaGAGCCCTCGAAGTAGACCC +
Preference number: 4 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQQRSHR*SPRSRP
Trigger: GGGTCTACTTCGAGGGCTCCATCTATGAGATCTCTG...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGCAGAGATCTCATAGATaGAGCCCTCGAAGTAGACCC +
Preference number: 4 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVQRSHR*SPRSRP
Trigger: GGGTCTACTTCGAGGGCTCCATCTATGAGATCTCTG...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp TCTTGGTTAGTCACTTACAACTTTGACGACTTTAACCACCTGATGAAACCTACCTGGGGGCGAGCTCCATaGTCTGGCTGGTCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: SWLVTYNFDDFNHLMKPTWGRAP*SGWSSG
Trigger: ACCCGAAGACCAGCCAGACCATGGAGCTCGCCCCCA...GGTAGGTTTCATCAGGTGGTTAAAGTCGTCAAAGTTGTAAGTGACTAACCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCTCTGTGACAATCCTGTaGGTCGACATGAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLASVTIL*VDMKQV
Trigger: CACTTGCTTCATGTCGACCCACAGGATTGTCACAGA...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp CTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGCTTGGATCTCATACTaGGGCCGCAGGATCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LSFCETCPRSFRGLKWLAAWISY*GRRIRE
Trigger: TTCCCTGATCCTGCGGCCCCAGTATGAGATCCAAGC...AGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTAGTCTGGCTGCCCCTTaGCCTTCACAACAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLSLAAP*PSQQSG
Trigger: ACCTGACTGTTGTGAAGGCCAAGGGGCAGCCAGACT...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTGTGGCCCTTCCTGTaGGCAGGAATCTTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: IKSVSTKLLPVCSSVSVRLWPFL*AGILLY
Trigger: GTACAGCAAGATTCCTGCCCACAGGAAGGGCCACAG...TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCACCTCCAGCACTTAGATaGTTTTCTGAAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPAPPALR*FSEIAQ
Trigger: TTGAGCAATTTCAGAAAACCATCTAAGTGCTGGAGG...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTTGTGTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 4 (lower is better)
Translates to: WLLLISPPAFGAQGPKVVFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...CACAACCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCGAACCTGAAGGAAGCTaGTGCAGTGTCCATCAAATC +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASEPEGS*CSVHQI
Trigger: GATTTGATGGACACTGCACCAGCTTCCTTCAGGTTC...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCGAACCTGAAGGAAGCTaGTGCAGTGTCCATCAAATC +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLAEPEGS*CSVHQI
Trigger: GATTTGATGGACACTGCACCAGCTTCCTTCAGGTTC...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGAGGGTCTTCTTAAATTaGCTCCTCCTCATTTCACCA +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRRVFLN*LLLISP
Trigger: TGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
3UTR CAA 72 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKW*AGVGFPEKQQL
Trigger: TAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp CCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCATGCAATCCTAAGACTTaGGAAGACTTGACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PQVSIRVFLNWLLLISPPCNPKT*EDLTPP
Trigger: GGGAGGCGTCAAGTCTTCTCAAGTCTTAGGATTGCA...TGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp CCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCATGTGGGCAGGAATCTTaGTGTACGTACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PQVSIRVFLNWLLLISPPCGQES*CTYWSH
Trigger: ATGGCTCCAGTACGTACAGCAAGATTCCTGCCCACA...TGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGTGTGGGCAGGAATCTTaGTGTACGTACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCECGQES*CTYWSH
Trigger: ATGGCTCCAGTACGTACAGCAAGATTCCTGCCCACA...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTAGTTTCTGTGAGACTTaGCCGAGGTCTTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPSFCET*PRSFRG
Trigger: GCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACT...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGAGTTTCTGTGAGACTTaGCCGAGGTCTTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKSFCET*PRSFRG
Trigger: GCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACT...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCCCTGAAGGAAGCTGGTaGAGTGTCCATCAAATCAGT +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFPEGSW*SVHQIS
Trigger: ACTGATTTGATGGACACTGCACCAGCTTCCTTCAGG...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCTCTGTGACAATCCTGTaGGTCGACATGAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFSVTIL*VDMKQV
Trigger: CACTTGCTTCATGTCGACCCACAGGATTGTCACAGA...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGTCTTCGCCTTGGGTTTaGGCAGCCGAGCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQSSPWV*AAERVA
Trigger: AGCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGA...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAATCCTTGATGAACTCTaGCAAGGTCTTCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PQVSIRVFLNWLLLISPPILDEL*QGLRLG
Trigger: CCCAAGGCGAAGACCTTGCCAGAGTTCATCAAGGAT...TGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCACCTCCAGCACTTAGATaGTTTTCTGAAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPPPALR*FSEIAQ
Trigger: TTGAGCAATTTCAGAAAACCATCTAAGTGCTGGAGG...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGCATGTTAACCACATGTaGTTAAACCCCTGTTTACCA +
Preference number: 4 (lower is better)
Translates to: RSIRLGATEMRKTVQASRHVNHM*LNPCLP
Trigger: TGGTAAACAGGGGTTTAACCACATGTGGTTAACATG...CCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp AGCAAGAATCTAGAACCTGAAGGAAGCTGGTGCAGTGTCCATCAAATCAGTTTCGACCTCACAAGGCAGTaGAAACTGGGCAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: SKNLEPEGSWCSVHQISFDLTRQ*KLGSQI
Trigger: GATCTGACTGCCCAGTTTTCACTGCCTTGTGAGGTC...GAAACTGATTTGATGGACACTGCACCAGCTTCCTTCAGGTTCTAGATTCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp CTGCAGCTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTGCAATCCTAAGACTTaGGAAGACCTGGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LQLSFCETCPRSFRGLKWCNPKT*EDLEVG
Trigger: CCCAACTTCCAGGTCTTCTCAAGTCTTAGGATTGCA...CCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373927.7
CDS-3UTR GCA 90 bp TCTTGGTTAGTCACTTACAACTTTGACGACTTTAACCACCTGATGAAACCTACCCCGCTCTGGGCTCTCTaGCTCCTCTTTGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: SWLVTYNFDDFNHLMKPTPLWAL*LLFALF
Trigger: GAAGAGTGCAAAGAGGAGGCAGAGAGCCCAGAGCGG...GGTAGGTTTCATCAGGTGGTTAAAGTCGTCAAAGTTGTAAGTGACTAACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR GCA 90 bp CTGCAGCTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGAGTTTCTGTGAGACTTaGCCGAGGTCTTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LQLSFCETCPRSFRGLKWSFCET*PRSFRG
Trigger: GCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACT...CCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGAGTTTCTGTGAGACTTaGCCGAGGTCTTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCESFCET*PRSFRG
Trigger: GCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACT...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp CATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGCCTGAAGGAAGCTGGTaGAGTGTCCATCAAATCAGT +
Preference number: 4 (lower is better)
Translates to: HQISFHKATPRLQLSFCEPEGSW*SVHQIS
Trigger: ACTGATTTGATGGACACTGCACCAGCTTCCTTCAGG...CTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTATCTATCAGGCTTGGTaGTACAGAGATGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPIYQAW*YRDEED
Trigger: GTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGAT...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCATCTATCAGGCTTGGTaGTACAGAGATGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCIYQAW*YRDEED
Trigger: GTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGAT...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR GCA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCAGACTTGAGAAGATGTaGATGATGGCTTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: YRSIRLGATEMRKTVQASRLEKM*MMAWIS
Trigger: TGAGATCCAAGCCATCATGCACATCTTCTCAAGTCT...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373925.5
CDS-3UTR CCA 90 bp AGCAAGAATCTAGAACCTGAAGGAAGCTGGTGCAGTGTCCATCAAATCAGTTTCATGTGCATGATGGCTTaGATCTCATACTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SKNLEPEGSWCSVHQISFMCMMA*ISYWGR
Trigger: GCGGCCCCAGTATGAGATCCAAGCCATCATGCACAT...GAAACTGATTTGATGGACACTGCACCAGCTTCCTTCAGGTTCTAGATTCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCTCACCACCAAGAATaGCTCTGTGATCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLAHHQE*LCDLLL
Trigger: GAGGAGAAGATCACAGAGCCATTCTTGGTGGTGAGC...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGCAGTGTGATCAGCATTaGCACTGCGCTGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQQCDQH*HCAAVT
Trigger: GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTG...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCAGGGTCTTCTTAAATTaGCTCCTCCTCATTTCACCA +
Preference number: 4 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLARVFLN*LLLISP
Trigger: TGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTCTAAGGTTGTGTTCTTaGAGCCAAGTTCCCACATTA +
Preference number: 4 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAALRLCS*SQVPTL
Trigger: TAATGTGGGAACTTGGCTTCAAGAACACAACCTTAG...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR TCA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCTAAGGTTGTGTTCTTaGAGCCAAGTTCCCACATTA +
Preference number: 4 (lower is better)
Translates to: ISFHKATPRLQLSFCETCLRLCS*SQVPTL
Trigger: TAATGTGGGAACTTGGCTTCAAGAACACAACCTTAG...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AGCAAGAATCTAGAACCTGAAGGAAGCTGGTGCAGTGTCCATCAAATCAGTTTCGCTCACCACCAAGAATaGCTCTGTGATCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SKNLEPEGSWCSVHQISFAHHQE*LCDLLL
Trigger: GAGGAGAAGATCACAGAGCCATTCTTGGTGGTGAGC...GAAACTGATTTGATGGACACTGCACCAGCTTCCTTCAGGTTCTAGATTCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR TCA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCACCACAGCCTCAAGCATaGGGAGCTGGTCCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSPQPQA*GAGPQS
Trigger: TGACTGAGGACCAGCTCCTCATGCTTGAGGCTGTGG...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp TCTTGGTTAGTCACTTACAACTTTGACGACTTTAACCACCTGATGAAACCTACCGATCAGCATTGGCACTaGGCTGCTGTCACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: SWLVTYNFDDFNHLMKPTDQHWH*AAVTKV
Trigger: AACCTTGGTGACAGCAGCGCAGTGCCAATGCTGATC...GGTAGGTTTCATCAGGTGGTTAAAGTCGTCAAAGTTGTAAGTGACTAACCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR GCA 90 bp ATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGAATCTATCAGGCTTGGTaGTACAGAGATGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: IKSVSTKLLPVCSSVSVRIYQAW*YRDEED
Trigger: GTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGAT...TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCATTCTGGAGGCGGACCTaGGTGACCTTGATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSFWRRT*VTLIRS
Trigger: GGACCTGATCAAGGTCACCCAGGTCCGCCTCCAGAA...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CCA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGATCCTTGATGAACTCTaGCAAGGTCTTCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQILDEL*QGLRLG
Trigger: CCCAAGGCGAAGACCTTGCCAGAGTTCATCAAGGAT...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTCCTCCAGCACTTAGATaGTTTTCTGAAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAAPPALR*FSEIAQ
Trigger: TTGAGCAATTTCAGAAAACCATCTAAGTGCTGGAGG...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp CTGCAGCTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 4 (lower is better)
Translates to: LQLSFCETCPRSFRGLKWFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...CCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp TACCAGTTTCTGCAGCCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCCTCCAGCACTTAGATaGTTTTCTGAAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: YQFLQPQVSIRVFLNWLLPPALR*FSEIAQ
Trigger: TTGAGCAATTTCAGAAAACCATCTAAGTGCTGGAGG...GAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGGCTGCAGAAACTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CCA 90 bp CTCAGTTTCTGTGAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 4 (lower is better)
Translates to: LSFCETCPRSFRGLKWLAFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...AGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTCACAGAAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTTTTAGAGGCTTAAAATaGTTGGCTGGTGTCGGATTC +
Preference number: 4 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLFRGLK*LAGVGF
Trigger: GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAA...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CCA 90 bp ATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGAAGGGTCTTCTTAAATTaGCTCCTCCTCATTTCACCA +
Preference number: 4 (lower is better)
Translates to: IKSVSTKLLPVCSSVSVRRVFLN*LLLISP
Trigger: TGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT...TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR TCA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCATTGAGAAGATGTGCATaGTGGCTTGGATCTCATACT +
Preference number: 4 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSLRRCA*WLGSHT
Trigger: AGTATGAGATCCAAGCCATCATGCACATCTTCTCAA...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373925.5
CDS-3UTR CCA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCACATGTTAACCACATGTaGTTAAACCCCTGTTTACCA +
Preference number: 4 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSHVNHM*LNPCLP
Trigger: TGGTAAACAGGGGTTTAACCACATGTGGTTAACATG...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS GCA 90 bp AGCACGCGCGGGAGGGAGGCGGGGTCCAAGGCGCGCACGAAGTCCTaGAGCGGCACCGGCTCCATGGTCCCCGCGGCTCTCTGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: STRGREAGSKARTKS*SGTGSMVPAALWAQ
Trigger: CTGAGCCCAGAGAGCCGCGGGGACCATGGAGCCGGTGCCGCTGCAGGACTTCGTGCGCGCCTTGGACCCCGCCTCCCTCCCGCGCGTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS CCA 90 bp GCCGCCGCAGCTTGCCTTGGTAGCCCCCTGACACCAGGAAGTGCCTaGGCACCTTGCGGCCCTTGCTTGAGGCCAGGACCCGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: AAAACLGSPLTPGSA*APCGPCLRPGPARV
Trigger: CACCCTGGCGGGTCCTGGCCTCAAGCAAGGGCCGCAAGGTGCCCAGGCACTTCCTGGTGTCAGGGGGCTACCAAGGCAAGCTGCGGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS TCA 90 bp CAGAAGGGCCCCTTCTGGGATAGGGGCAGGTGCAGGATGACCTGCTaGCCCTCCATGCCCAGGACACAGCGGGCAGAGCGGATCCCGAGG +
Preference number: 5 (lower is better)
Translates to: QKGPFWDRGRCRMTC*PSMPRTQRAERIPR
Trigger: CCTCGGGATCCGCTCTGCCCGCTGTGTCCTGGGCATGGAGGGTCAGCAGGTCATCCTGCACCTGCCCCTATCCCAGAAGGGGCCCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000427466.1
ENST00000456990.1
ENST00000466068.1
CDS TCA 90 bp GGCCAGGCCCCAGCACCTCCAGCCGGTCACCCACAGCCAGGGACGTaGACTCGGGATTCTCCTCCCTCTCGCCCTCACAGTCCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: GQAPAPPAGHPQPGT*TRDSPPSRPHSPLW
Trigger: CCACAAAGGACTGTGAGGGCGAGAGGGAGGAGAATCCCGAGTTCACGTCCCTGGCTGTGGGTGACCGGCTGGAGGTGCTGGGGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS GCA 90 bp GGTAGCCCCCTGACACCAGGAAGTGCCTGGGCACCTTGCGGCCCTTaGTTGAGGCCAGGACCCGCCAGGGTGGTGAGGCTAGGCCATAGA +
Preference number: 5 (lower is better)
Translates to: GSPLTPGSAWAPCGP*LRPGPARVVRLGHR
Trigger: TCTATGGCCTAGCCTCACCACCCTGGCGGGTCCTGGCCTCAAGCAAGGGCCGCAAGGTGCCCAGGCACTTCCTGGTGTCAGGGGGCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS GCA 90 bp GCTTGCCTTGGTAGCCCCCTGACACCAGGAAGTGCCTGGGCACCTTaGGGCCCTTGCTTGAGGCCAGGACCCGCCAGGGTGGTGAGGCTA +
Preference number: 5 (lower is better)
Translates to: ACLGSPLTPGSAWAP*GPCLRPGPARVVRL
Trigger: TAGCCTCACCACCCTGGCGGGTCCTGGCCTCAAGCAAGGGCCGCAAGGTGCCCAGGCACTTCCTGGTGTCAGGGGGCTACCAAGGCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS CCA 90 bp CCTTCCCAGGCCAGGACCTCGCTCAGCAGCAGCGGTTTGATAAAGTaGACGTGCCGGGAGGAGGCGGTGACGTCCTCCACGTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: PSQARTSLSSSGLIK*TCREEAVTSSTSTS
Trigger: GGAGGTCGACGTGGAGGACGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGGTCCTGGCCTGGGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000442118.5
CDS CCA 90 bp GCCTGGTCACTCAGCCGCTCGCTCAGCAGCAGCGGTTTGATAAAGTaGACGTGCCGGGAGGAGGCGGTGACGTCCTCCACGTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: AWSLSRSLSSSGLIK*TCREEAVTSSTSTS
Trigger: GGAGGTCGACGTGGAGGACGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGCGGCTGAGTGACCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456990.1
CDS GCA 90 bp CAGGCCAGGACCTCGCTCAGCAGCAGCGGTTTGATAAAGTGGACGTaGCGGGAGGAGGCGGTGACGTCCTCCACGTCGACCTCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: QARTSLSSSGLIKWT*REEAVTSSTSTSRV
Trigger: TACCCTGGAGGTCGACGTGGAGGACGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGGTCCTGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000442118.5
CDS GCA 90 bp TCACTCAGCCGCTCGCTCAGCAGCAGCGGTTTGATAAAGTGGACGTaGCGGGAGGAGGCGGTGACGTCCTCCACGTCGACCTCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: SLSRSLSSSGLIKWT*REEAVTSSTSTSRV
Trigger: TACCCTGGAGGTCGACGTGGAGGACGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGCGGCTGAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456990.1
CDS-3UTR CAA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGAAAGTGCCTGGGCACCTaGCGGCCCTTGCTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGKCLGT*RPLLEA
Trigger: GGCCTCAAGCAAGGGCCGCAAGGTGCCCAGGCACTT...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS TCA 90 bp GGGGTGGCTGGTGTCCTTGGCCACCACCTTGACCTCACAAGGCAGTaGAAACTGGGCAGTCAGATCTGCCAGGCTGTAGCGCCGGCTGTC +
Preference number: 5 (lower is better)
Translates to: GVAGVLGHHLDLTRQ*KLGSQICQAVAPAV
Trigger: GACAGCCGGCGCTACAGCCTGGCAGATCTGACTGCCCAGTTTTCACTGCCTTGTGAGGTCAAGGTGGTGGCCAAGGACACCAGCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
ENST00000467258.1
ENST00000482828.1
CDS TCA 90 bp AGACGCAAAGCCTCTGGCCTTTTTGCAAGGAGCCCACCCACGGGCTaGGGAAGATGGGGCGGCCCTCAGGAACCTCCAGGATCTCCATGG +
Preference number: 5 (lower is better)
Translates to: RRKASGLFARSPPTG*GRWGGPQEPPGSPW
Trigger: CCATGGAGATCCTGGAGGTTCCTGAGGGCCGCCCCATCTTCCTCAGCCCGTGGGTGGGCTCCTTGCAAAAAGGCCAGAGGCTTTGCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS TCA 90 bp TCCAACGCACAGAGGGGAAAAGTTGTGGTTCCAGGGCGACAGCAGTaGCCGGGCCCAGAGTCCCTCCACTGGGAGCCAAGACACGGGCTA +
Preference number: 5 (lower is better)
Translates to: SNAQRGKVVVPGRQQ*PGPESLHWEPRHGL
Trigger: TAGCCCGTGTCTTGGCTCCCAGTGGAGGGACTCTGGGCCCGGTCACTGCTGTCGCCCTGGAACCACAACTTTTCCCCTCTGTGCGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CCA 90 bp AGCTCCATGGTCTGGCTGGTCTTCGGGTTCTCACAGACCACCTTCTaGAGGCGGACCTGGGTGACCTTGATCAGGTCCCCCGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SSMVWLVFGFSQTTF*RRTWVTLIRSPVER
Trigger: CCTCTCCACGGGGGACCTGATCAAGGTCACCCAGGTCCGCCTCCAGAAGGTGGTCTGTGAGAACCCGAAGACCAGCCAGACCATGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000442118.5
ENST00000466068.1
CDS CCA 90 bp ACAATGGTCCTGCGCACCTGGAAGTTGGGGGCGAGCTCCATGGTCTaGCTGGTCTTCGGGTTCTCACAGACCACCTTCTGGAGGCGGACC +
Preference number: 5 (lower is better)
Translates to: TMVLRTWKLGASSMV*LVFGFSQTTFWRRT
Trigger: GGTCCGCCTCCAGAAGGTGGTCTGTGAGAACCCGAAGACCAGCCAGACCATGGAGCTCGCCCCCAACTTCCAGGTGCGCAGGACCATTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442118.5
CDS-3UTR CAA 90 bp ACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGCGGACCTGGGTGACCTaGATCAGGTCCCCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: TAGVAGLRGTLPAALHPKRTWVT*IRSPVE
Trigger: CTCCACGGGGGACCTGATCAAGGTCACCCAGGTCCG...CTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CAA 90 bp TCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTGGGGTGGCTGGTGTCCTaGGCCACCACCTTGACCTCA +
Preference number: 5 (lower is better)
Translates to: SPRLMASDSPLHPPVGQLGWLVS*ATTLTS
Trigger: TGAGGTCAAGGTGGTGGCCAAGGACACCAGCCACCC...CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS TCA 90 bp GAGCGTGCAGTGGGAGCACAGAAGAGGAGGCAGGACCACCGCTGCTaGGTGAGAAATCCGAGTCCCACCTTGCCTGTGAGCCTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: ERAVGAQKRRQDHRC*VRNPSPTLPVSLKE
Trigger: CTCCTTCAGGCTCACAGGCAAGGTGGGACTCGGATTTCTCACTCAGCAGCGGTGGTCCTGCCTCCTCTTCTGTGCTCCCACTGCACGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp TGCTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTGGCAAGGTCTTCGCCTaGGGTTTGGGCAGCCGAGCG +
Preference number: 5 (lower is better)
Translates to: CSASQGSEAEGVTCEMLGGKVFA*GLGSRA
Trigger: CGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGCC...ACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAGCTGGGGTTGCAGGATaGAGAGGAACCCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALAGVAG*RGTLPA
Trigger: AGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGC...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp AGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGCATCCCAAGGCCTGCTGTCACCAAGGTaGATGGCCTCGGATTCCCCT +
Preference number: 5 (lower is better)
Translates to: SWGCRIERNPASCSASQGLLSPR*MASDSP
Trigger: AGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG...GCCTTGGGATGCAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCCTTGCGGCCCTTGCTaGAGGCCAGGACCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: YRSIRLGATEMRKTVQASPCGPC*RPGPAR
Trigger: CCTGGCGGGTCCTGGCCTCAAGCAAGGGCCGCAAGG...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR CAA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGCCGTGGGGAACTCCCTaGGCCGCCGCCGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKPWGTP*AAAAAC
Trigger: GCAAGCTGCGGCGGCGGCCAAGGGAGTTCCCCACGG...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS CCA 90 bp TCCCTGATCAGCACCAAGATTCCAACGCACAGAGGGGAAAAGTTGTaGTTCCAGGGCGACAGCAGTGACCGGGCCCAGAGTCCCTCCACT +
Preference number: 5 (lower is better)
Translates to: SLISTKIPTHRGEKL*FQGDSSDRAQSPST
Trigger: AGTGGAGGGACTCTGGGCCCGGTCACTGCTGTCGCCCTGGAACCACAACTTTTCCCCTCTGTGCGTTGGAATCTTGGTGCTGATCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCGGACCTGGGTGACCTaGATCAGGTCCCCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNRTWVT*IRSPVE
Trigger: CTCCACGGGGGACCTGATCAAGGTCACCCAGGTCCG...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CAA 90 bp TCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGACAGCTGTCCTTGGCCACCACCTaGACCTCACAAGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: SPRLMASDSPLHPPVGQLSLATT*TSQGSE
Trigger: TTCACTGCCTTGTGAGGTCAAGGTGGTGGCCAAGGA...CAGCTGTCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGGGTGGCTGGTGTCCTaGGCCACCACCTTGACCTCA +
Preference number: 5 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPGWLVS*ATTLTS
Trigger: TGAGGTCAAGGTGGTGGCCAAGGACACCAGCCACCC...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp CAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCAAGTCTGGCTGCCCCTaGGCCTTCACAACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: QGSEAEGVTCEMLGPNQPKSGCP*AFTTVR
Trigger: CCTGACTGTTGTGAAGGCCAAGGGGCAGCCAGACTT...GGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTAAGTCTGGCTGCCCCTaGGCCTTCACAACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGAKSGCP*AFTTVR
Trigger: CCTGACTGTTGTGAAGGCCAAGGGGCAGCCAGACTT...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGGCACCTTGCGGCCCTaGCTTGAGGCCAGGACCCGC +
Preference number: 5 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVGTLRP*LEARTR
Trigger: GCGGGTCCTGGCCTCAAGCAAGGGCCGCAAGGTGCC...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS CCA 90 bp GAGCTGCGGGCATTTCTCTCGCTGGAGCGTGGACAGCAGAGTGAGTaGAGGAAGATGGGTCGGGGAGGTGCGACAAGTCAGCTTATAAAG +
Preference number: 5 (lower is better)
Translates to: ELRAFLSLERGQQSE*RKMGRGGATSQLIK
Trigger: CTTTATAAGCTGACTTGTCGCACCTCCCCGACCCATCTTCCTCCACTCACTCTGCTGTCCACGCTCCAGCGAGAGAAATGCCCGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp CTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCCGGACCTGGGTGACCTaGATCAGGTCCCCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LLKLAPPHFTTSFWGPRSRTWVT*IRSPVE
Trigger: CTCCACGGGGGACCTGATCAAGGTCACCCAGGTCCG...GGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
CDS-3UTR CAA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCCGGACCTGGGTGACCTaGATCAGGTCCCCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLARTWVT*IRSPVE
Trigger: CTCCACGGGGGACCTGATCAAGGTCACCCAGGTCCG...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CAA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCGGCAAGGTCTTCGCCTaGGGTTTGGGCAGCCGAGCG +
Preference number: 5 (lower is better)
Translates to: YRSIRLGATEMRKTVQASGKVFA*GLGSRA
Trigger: CGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGCC...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp ACCGGTGGGACAGCTGGGGTTGCAGGATTGAGAGGAACCCTGCCAGCTGCTCTGAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCT +
Preference number: 5 (lower is better)
Translates to: TGGTAGVAGLRGTLPAALRGLKW*AGVGFP
Trigger: AGGGAATCCGACACCAGCCAACCATTTTAAGCCTCT...CAGAGCAGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGCTGTCCCACCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCACTGCTGTCACCAAGGTaGATGGCCTCGGATTCCCCT +
Preference number: 5 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPALLSPR*MASDSP
Trigger: AGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTATTTCACCACCAGCTTTaGGGGCCCAAGGTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: SEAEGVTCEMLGPNQPALFHHQL*GPKVLR
Trigger: CCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAA...TAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGAGAAGACCTGGAAGTaGGGGGCGAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPEKTWK*GASSMV
Trigger: GACCATGGAGCTCGCCCCCAACTTCCAGGTCTTCTC...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373927.7
CDS CCA 90 bp GGCAGGAATCTTGCTGTACGTACTGGAGCCATCCTTGATGAACTCTaGCAAGGTCTTCGCCTTGGGTTTGGGCAGCCGAGCGTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GRNLAVRTGAILDEL*QGLRLGFGQPSVLL
Trigger: CAGCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGCCAGAGTTCATCAAGGATGGCTCCAGTACGTACAGCAAGATTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
ENST00000467258.1
ENST00000492877.1
CDS CCA 90 bp GTCCCTCCACTGGGAGCCAAGACACGGGCTAAGGTCTGTCGGTTCTaGAAAGTACCCTTTTCAGCACTGGCACAAGGCCTGTGTTTCGGA +
Preference number: 5 (lower is better)
Translates to: VPPLGAKTRAKVCRF*KVPFSALAQGLCFG
Trigger: TCCGAAACACAGGCCTTGTGCCAGTGCTGAAAAGGGTACTTTCCAGAACCGACAGACCTTAGCCCGTGTCTTGGCTCCCAGTGGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp TGCTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTTCCTTGGCCACCACCTaGACCTCACAAGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: CSASQGSEAEGVTCEMLGSLATT*TSQGSE
Trigger: TTCACTGCCTTGTGAGGTCAAGGTGGTGGCCAAGGA...ACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAAAGTCTGGCTGCCCCTaGGCCTTCACAACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPKSGCP*AFTTVR
Trigger: CCTGACTGTTGTGAAGGCCAAGGGGCAGCCAGACTT...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp TACAGATCTATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCGTCTTCGCCTTGGGTTaGGGCAGCCGAGCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: YRSIRLGATEMRKTVQASVFALG*GSRACC
Trigger: GCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGAC...GGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATAGATCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGGCAAGGTCTTCGCCTaGGGTTTGGGCAGCCGAGCG +
Preference number: 5 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKGKVFA*GLGSRA
Trigger: CGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGCC...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCGGCAAGGTCTTCGCCTaGGGTTTGGGCAGCCGAGCG +
Preference number: 5 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFGKVFA*GLGSRA
Trigger: CGCTCGGCTGCCCAAACCCAAGGCGAAGACCTTGCC...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTTGTGCTGCTGTCACCAAGGTaGATGGCCTCGGATTCCCCT +
Preference number: 5 (lower is better)
Translates to: WLLLISPPAFGAQGPKVVLLSPR*MASDSP
Trigger: AGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG...CACAACCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS TCA 90 bp TGGGGATACCGTAAGAAAGGAGCCACAAAGCCTTGTGACGACGCCTaGGCTGAGGTGGCCCAGAAGAAAGAGGACTTCCATTGCGTTCCC +
Preference number: 5 (lower is better)
Translates to: WGYRKKGATKPCDDA*AEVAQKKEDFHCVP
Trigger: GGGAACGCAATGGAAGTCCTCTTTCTTCTGGGCCACCTCAGCTCAGGCGTCGTCACAAGGCTTTGTGGCTCCTTTCTTACGGTATCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CCA 90 bp TGTTCATCATCATCTAGATCCTGCCTTTGGGGCTTAGCGGGCCTGTaGCCCTTCCTGTGGGCAGGAATCTTGCTGTACGTACTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: CSSSSRSCLWGLAGL*PFLWAGILLYVLEP
Trigger: TGGCTCCAGTACGTACAGCAAGATTCCTGCCCACAGGAAGGGCCACAGGCCCGCTAAGCCCCAAAGGCAGGATCTAGATGATGATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
ENST00000492877.1
CDS CCA 90 bp GTAAGAAAGGAGCCACAAAGCCTTGTGACGACGCCTGAGCTGAGGTaGCCCAGAAGAAAGAGGACTTCCATTGCGTTCCCCCATGTGCCA +
Preference number: 5 (lower is better)
Translates to: VRKEPQSLVTTPELR*PRRKRTSIAFPHVP
Trigger: TGGCACATGGGGGAACGCAATGGAAGTCCTCTTTCTTCTGGGCCACCTCAGCTCAGGCGTCGTCACAAGGCTTTGTGGCTCCTTTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTGTCTTCGCCTTGGGTTaGGGCAGCCGAGCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPVFALG*GSRACC
Trigger: GCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGAC...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGTCTTCGCCTTGGGTTaGGGCAGCCGAGCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQVFALG*GSRACC
Trigger: GCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGAC...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTCTTCGCCTTGGGTTaGGGCAGCCGAGCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKVFALG*GSRACC
Trigger: GCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGAC...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp TTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTGTCTTCGCCTTGGGTTaGGGCAGCCGAGCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: FLNWLLLISPPAFGAQGPVFALG*GSRACC
Trigger: GCAACACGCTCGGCTGCCCAAACCCAAGGCGAAGAC...AGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp TGCTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTGTACTGGAGCCATCCTaGATGAACTCTGGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: CSASQGSEAEGVTCEMLGVLEPS*MNSGKV
Trigger: GACCTTGCCAGAGTTCATCAAGGATGGCTCCAGTAC...ACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCATTTCACCACCAGCTTTaGGGGCCCAAGGTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPFHHQL*GPKVLR
Trigger: CCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAA...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCATGTGCATGATGGCTaGGATCTCATACTGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNHVHDG*DLILGP
Trigger: CGGCCCCAGTATGAGATCCAAGCCATCATGCACATG...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp TGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGGTTGTGAGGGTAGAAGGGATCTaGACAATGGTCCTGCGCATG +
Preference number: 5 (lower is better)
Translates to: WLLLISPPAFGAQGPKVVRVEGI*TMVLRM
Trigger: CATGCGCAGGACCATTGTCAAGATCCCTTCTACCCT...CACAACCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp TGCTCTGCATCCCAAGGCTCTGAGGCTGAGGGAGTCACGTGCGAGATGTTAGGTAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCT +
Preference number: 5 (lower is better)
Translates to: CSASQGSEAEGVTCEMLGRGLKW*AGVGFP
Trigger: AGGGAATCCGACACCAGCCAACCATTTTAAGCCTCT...ACCTAACATCTCGCACGTGACTCCCTCAGCCTCAGAGCCTTGGGATGCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGCTGGGGTTGCAGGATaGAGAGGAACCCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQAGVAG*RGTLPA
Trigger: AGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGC...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCGCTGGGGTTGCAGGATaGAGAGGAACCCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTAGVAG*RGTLPA
Trigger: AGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGC...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGCTGGGGTTGCAGGATaGAGAGGAACCCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAAAGVAG*RGTLPA
Trigger: AGCTGGCAGGGTTCCTCTCAATCCTGCAACCCCAGC...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCCTGCTGTCACCAAGGTaGATGGCCTCGGATTCCCCT +
Preference number: 5 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCLLSPR*MASDSP
Trigger: AGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCCTGCTGTCACCAAGGTaGATGGCCTCGGATTCCCCT +
Preference number: 5 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLALLSPR*MASDSP
Trigger: AGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp GGAGTCACGTGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATTTTCACCACCAGCTTTaGGGGCCCAAGGTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: GVTCEMLGPNQPALSSKNFHHQL*GPKVLR
Trigger: CCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAA...ATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCACGTGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp CTGCTGTCACCAAGGTTGATGGCCTCGGATTCCCCTCTGCATCCACCGGTGGGAAAGGGTCTTCTTAAATaGGCTCCTCCTCATTTCACC +
Preference number: 5 (lower is better)
Translates to: LLSPRLMASDSPLHPPVGKGLLK*APPHFT
Trigger: GGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTT...TCCCACCGGTGGATGCAGAGGGGAATCCGAGGCCATCAACCTTGGTGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp TTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTAAGAAGCCTCTGGCCTTTTaGCAAGGAGCCCACCCACGG +
Preference number: 5 (lower is better)
Translates to: LNWLLLISPPAFGAQGPKKPLAF*QGAHPR
Trigger: CCGTGGGTGGGCTCCTTGCAAAAAGGCCAGAGGCTT...CTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS-3UTR CAA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTCGCCCTCACAGTCCTTaGTGGCCACCACCCGGAGTG +
Preference number: 5 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLRPHSP*WPPPGV
Trigger: CACTCCGGGTGGTGGCCACAAAGGACTGTGAGGGCG...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373921.8
CDS GCA 90 bp CATATCAGGGGCCTGCCACAGAGTAAGCAGGTCACAGAAAGCAGCTaGAGAGGATATCACAGGTCTACTGGTGAGAAAAAGGACGCTCGG +
Preference number: 5 (lower is better)
Translates to: HIRGLPQSKQVTESS*RGYHRSTGEKKDAR
Trigger: CCGAGCGTCCTTTTTCTCACCAGTAGACCTGTGATATCCTCTGCAGCTGCTTTCTGTGACCTGCTTACTCTGTGGCAGGCCCCTGATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp GAGACTTGCCCGAGGTCTTTTAGAGGCTTAAAATGGTTGGCTGGTGTCGGATTCCTCAGCAGCAGCGGTTaGATAAAGTGGACGTGCCGG +
Preference number: 5 (lower is better)
Translates to: ETCPRSFRGLKWLAGVGFLSSSG*IKWTCR
Trigger: CCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAG...GAATCCGACACCAGCCAACCATTTTAAGCCTCTAAAAGACCTCGGGCAAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp CTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCTCCTTGGCCACCACCTaGACCTCACAAGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LLKLAPPHFTTSFWGPRSSLATT*TSQGSE
Trigger: TTCACTGCCTTGTGAGGTCAAGGTGGTGGCCAAGGA...GGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp ATCAAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGAGGGTGGCTGGTGTCCTaGGCCACCACCTTGACCTCA +
Preference number: 5 (lower is better)
Translates to: IKSVSTKLLPVCSSVSVRGWLVS*ATTLTS
Trigger: TGAGGTCAAGGTGGTGGCCAAGGACACCAGCCACCC...TCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp GTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCACTTAGAGTACTGGAGCCATCCTaGATGAACTCTGGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: VGFPEKQQLGSVVPPALRVLEPS*MNSGKV
Trigger: GACCTTGCCAGAGTTCATCAAGGATGGCTCCAGTAC...TCTAAGTGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373925.5
ENST00000373927.7
CDS-3UTR CAA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCCTGTGGGCAGGAATCTaGCTGTACGTACTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCLWAGI*LYVLEP
Trigger: TGGCTCCAGTACGTACAGCAAGATTCCTGCCCACAG...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp CTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAGGTCCCTGTGGGCAGGAATCTaGCTGTACGTACTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LLKLAPPHFTTSFWGPRSLWAGI*LYVLEP
Trigger: TGGCTCCAGTACGTACAGCAAGATTCCTGCCCACAG...GGACCTTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp TATCAGGCTTGGTGCTACAGAGATGAGGAAGACAGTCCAGGCCTCCCGGGGGCTAAGGGTCTTCTTAAATaGGCTCCTCCTCATTTCACC +
Preference number: 5 (lower is better)
Translates to: YQAWCYRDEEDSPGLPGAKGLLK*APPHFT
Trigger: GGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTT...AGCCCCCGGGAGGCCTGGACTGTCTTCCTCATCTCTGTAGCACCAAGCCTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp TCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCCGATGTGCATGATGGCTaGGATCTCATACTGGGGCCG +
Preference number: 5 (lower is better)
Translates to: SVSTKLLPVCSSVSVRLADVHDG*DLILGP
Trigger: CGGCCCCAGTATGAGATCCAAGCCATCATGCACATC...GGCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373925.5
CDS CCA 90 bp TGTGAAGCAGGACACCGGTGTGTAACTCAGAAGCACTGTGAGAATTaGTTGGGACAAAGCATATCAGGGGCCTGCCACAGAGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CEAGHRCVTQKHCEN*LGQSISGACHRVSR
Trigger: CCTGCTTACTCTGTGGCAGGCCCCTGATATGCTTTGTCCCAACCAATTCTCACAGTGCTTCTGAGTTACACACCGGTGTCCTGCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CCA 90 bp CACGGGCTAAGGTCTGTCGGTTCTGGAAAGTACCCTTTTCAGCACTaGCACAAGGCCTGTGTTTCGGATGTTTCAGTCCAGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: HGLRSVGSGKYPFQH*HKACVSDVSVQPLS
Trigger: TGACAATGGCTGGACTGAAACATCCGAAACACAGGCCTTGTGCCAGTGCTGAAAAGGGTACTTTCCAGAACCGACAGACCTTAGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp GGGTGGCAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGTACTGGAGCCATCCTaGATGAACTCTGGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: GWQTLTKSPMQCDQHWHCVLEPS*MNSGKV
Trigger: GACCTTGCCAGAGTTCATCAAGGATGGCTCCAGTAC...GCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTCTGTGGGCAGGAATCTaGCTGTACGTACTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAALWAGI*LYVLEP
Trigger: TGGCTCCAGTACGTACAGCAAGATTCCTGCCCACAG...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCCTGTGGGCAGGAATCTaGCTGTACGTACTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTLWAGI*LYVLEP
Trigger: TGGCTCCAGTACGTACAGCAAGATTCCTGCCCACAG...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp GCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCAGCACCTAAGGTTGTGTTCTaGAAGCCAAGTTCCCACATT +
Preference number: 5 (lower is better)
Translates to: AGVGFPEKQQLGSVVPPAPKVVF*KPSSHI
Trigger: AATGTGGGAACTTGGCTTCAAGAACACAACCTTAGG...TGCTGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAATTTCACCACCAGCTTTaGGGGCCCAAGGTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQFHHQL*GPKVLR
Trigger: CCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAA...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS GCA 90 bp GGGCTGAGACCACTCAGGAGTCATCTTGTAATTTCCACTGCCACCTaGTGCCTACCACACGTGATTAAATACGAGTCACCCAAGATCCCA +
Preference number: 5 (lower is better)
Translates to: GLRPLRSHLVISTAT*CLPHVIKYESPKIP
Trigger: TGGGATCTTGGGTGACTCGTATTTAATCACGTGTGGTAGGCAGCAGGTGGCAGTGGAAATTACAAGATGACTCCTGAGTGGTCTCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS GCA 90 bp CCCTCTGAGTGGTTTCAATTCCCAGTTTATGTAGGAGAGAAAGTGTaGCTTGTCAAAGGTCACACGGGGATCCACAGCAGGGCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: PSEWFQFPVYVGEKV*LVKGHTGIHSRAKV
Trigger: AACCTTGGCCCTGCTGTGGATCCCCGTGTGACCTTTGACAAGGCACACTTTCTCTCCTACATAAACTGGGAATTGAAACCACTCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTAGGGTAGAAGGGATCTaGACAATGGTCCTGCGCATG +
Preference number: 5 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAARVEGI*TMVLRM
Trigger: CATGCGCAGGACCATTGTCAAGATCCCTTCTACCCT...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp AAATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTCTCAGCAGCAGCGGTTaGATAAAGTGGACGTGCCGG +
Preference number: 5 (lower is better)
Translates to: KSVSTKLLPVCSSVSVRLLSSSG*IKWTCR
Trigger: CCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAG...AAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp TTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTGTCACCGTACTGGAGCCATCCTaGATGAACTCTGGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: LTKSPMQCDQHWHCAAVTVLEPS*MNSGKV
Trigger: GACCTTGCCAGAGTTCATCAAGGATGGCTCCAGTAC...GGTGACAGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTACTGGAGCCATCCTaGATGAACTCTGGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVVLEPS*MNSGKV
Trigger: GACCTTGCCAGAGTTCATCAAGGATGGCTCCAGTAC...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGGTTCCTCCACCTAAGGTTGTGTTCTaGAAGCCAAGTTCCCACATT +
Preference number: 5 (lower is better)
Translates to: LAGVGFPEKQQLGSVVPPPKVVF*KPSSHI
Trigger: AATGTGGGAACTTGGCTTCAAGAACACAACCTTAGG...TGGAGGAACCACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS TCA 90 bp GCCTTGGGTTTGGGCAGCCGAGCGTGTTGCTGCAATCCTAAGACTTaGGAAGACTTTGGGAGAAAAAGCAGAAATCATCAGGGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: ALGLGSRACCCNPKT*EDFGRKSRNHQGLK
Trigger: CTTGAGACCCTGATGATTTCTGCTTTTTCTCCCAAAGTCTTCTCAAGTCTTAGGATTGCAGCAACACGCTCGGCTGCCCAAACCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp ATCAGTTTCCACAAAGCTACTCCCCGTCTGCAGCTCAGTTTCTGTGAGACTTGCAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCT +
Preference number: 5 (lower is better)
Translates to: ISFHKATPRLQLSFCETCRGLKW*AGVGFP
Trigger: AGGGAATCCGACACCAGCCAACCATTTTAAGCCTCT...GCAAGTCTCACAGAAACTGAGCTGCAGACGGGGAGTAGCTTTGTGGAAACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp TTAAAATGGTTGGCTGGTGTCGGATTCCCTGAGAAGCAGCAGTTAGGAAGCGTGAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCT +
Preference number: 5 (lower is better)
Translates to: LKWLAGVGFPEKQQLGSVRGLKW*AGVGFP
Trigger: AGGGAATCCGACACCAGCCAACCATTTTAAGCCTCT...CACGCTTCCTAACTGCTGCTTCTCAGGGAATCCGACACCAGCCAACCATTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp AGGGTCTTCTTAAATTGGCTCCTCCTCATTTCACCACCAGCTTTTGGGGCCCAAAGAGGCTTAAAATGGTaGGCTGGTGTCGGATTCCCT +
Preference number: 5 (lower is better)
Translates to: RVFLNWLLLISPPAFGAQRGLKW*AGVGFP
Trigger: AGGGAATCCGACACCAGCCAACCATTTTAAGCCTCT...TTGGGCCCCAAAAGCTGGTGGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS TCA 90 bp GGGCAGCCACAGAAGGTTCCAGAAGATGGAGCTGAGGTCCATCAATaGCTAAGAAAGGAGTTAGGAGGCCTTTCTGACAGCTTTTGTAAG +
Preference number: 5 (lower is better)
Translates to: GQPQKVPEDGAEVHQ*LRKELGGLSDSFCK
Trigger: CTTACAAAAGCTGTCAGAAAGGCCTCCTAACTCCTTTCTTAGTCATTGATGGACCTCAGCTCCATCTTCTGGAACCTTCTGTGGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS GCA 90 bp GGACTTCCATTGCGTTCCCCCATGTGCCAGATGCTACATGACGTCTaGTCTTTAATCCTCAAGTTACCCTCTGAGTGGTTTCAATTCCCA +
Preference number: 5 (lower is better)
Translates to: GLPLRSPMCQMLHDV*SLILKLPSEWFQFP
Trigger: TGGGAATTGAAACCACTCAGAGGGTAACTTGAGGATTAAAGAGCAGACGTCATGTAGCATCTGGCACATGGGGGAACGCAATGGAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGCTCAGCAGCAGCGGTTaGATAAAGTGGACGTGCCGG +
Preference number: 5 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQLSSSG*IKWTCR
Trigger: CCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAG...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS GCA 90 bp CTGAGACCACTCAGGAGTCATCTTGTAATTTCCACTGCCACCTGCTaGCTACCACACGTGATTAAATACGAGTCACCCAAGATCCCAAAA +
Preference number: 5 (lower is better)
Translates to: LRPLRSHLVISTATC*LPHVIKYESPKIPK
Trigger: TTTTGGGATCTTGGGTGACTCGTATTTAATCACGTGTGGTAGGCAGCAGGTGGCAGTGGAAATTACAAGATGACTCCTGAGTGGTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp AGCAAGAATCTAGAACCTGAAGGAAGCTGGTGCAGTGTCCATCAAATCAGTTTCAGGGTAGAAGGGATCTaGACAATGGTCCTGCGCATG +
Preference number: 5 (lower is better)
Translates to: SKNLEPEGSWCSVHQISFRVEGI*TMVLRM
Trigger: CATGCGCAGGACCATTGTCAAGATCCCTTCTACCCT...GAAACTGATTTGATGGACACTGCACCAGCTTCCTTCAGGTTCTAGATTCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS-3UTR CAA 90 bp TGCGAGATGTTAGGTCCAAACCAGCCCGCCCTAAGTAGCAAGAATCTAGAACCTCCTAAGGTTGTGTTCTaGAAGCCAAGTTCCCACATT +
Preference number: 5 (lower is better)
Translates to: CEMLGPNQPALSSKNLEPPKVVF*KPSSHI
Trigger: AATGTGGGAACTTGGCTTCAAGAACACAACCTTAGG...AGGTTCTAGATTCTTGCTACTTAGGGCGGGCTGGTTTGGACCTAACATCTCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp CAGACGTTAACAAAATCTCCCATGCAGTGTGATCAGCATTGGCACTGCGCTGCTAAGGGTCTTCTTAAATaGGCTCCTCCTCATTTCACC +
Preference number: 5 (lower is better)
Translates to: QTLTKSPMQCDQHWHCAAKGLLK*APPHFT
Trigger: GGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTT...AGCAGCGCAGTGCCAATGCTGATCACACTGCATGGGAGATTTTGTTAACGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp TACCAGTTTCTGCAGCCTCAGGTCTCCATAAGGGTCTTCTTAAATTGGCTCCTCCCTAAGGTTGTGTTCTaGAAGCCAAGTTCCCACATT +
Preference number: 5 (lower is better)
Translates to: YQFLQPQVSIRVFLNWLLPKVVF*KPSSHI
Trigger: AATGTGGGAACTTGGCTTCAAGAACACAACCTTAGG...GAGGAGCCAATTTAAGAAGACCCTTATGGAGACCTGAGGCTGCAGAAACTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS-3UTR CAA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCACTGTGGGCAGGAATCTaGCTGTACGTACTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSLWAGI*LYVLEP
Trigger: TGGCTCCAGTACGTACAGCAAGATTCCTGCCCACAG...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS-3UTR CAA 90 bp ATCCATGTTAACCACATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCATTTCACCACCAGCTTTaGGGGCCCAAGGTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: IHVNHMWLNPCLPYTDLSFHHQL*GPKVLR
Trigger: CCTTAGGACCTTGGGCCCCAAAAGCTGGTGGTGAAA...TGATAGATCTGTATATGGTAAACAGGGGTTTAACCACATGTGGTTAACATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
CDS CCA 90 bp ATGCTACATGACGTCTGCTCTTTAATCCTCAAGTTACCCTCTGAGTaGTTTCAATTCCCAGTTTATGTAGGAGAGAAAGTGTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: MLHDVCSLILKLPSE*FQFPVYVGEKVCLV
Trigger: GACAAGGCACACTTTCTCTCCTACATAAACTGGGAATTGAAACCACTCAGAGGGTAACTTGAGGATTAAAGAGCAGACGTCATGTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS-3UTR CAA 90 bp ATGTGGTTAAACCCCTGTTTACCATATACAGATCTATCAGGCTTGGTGCTACAGAAGGGTCTTCTTAAATaGGCTCCTCCTCATTTCACC +
Preference number: 5 (lower is better)
Translates to: MWLNPCLPYTDLSGLVLQKGLLK*APPHFT
Trigger: GGTGAAATGAGGAGGAGCCAATTTAAGAAGACCCTT...CTGTAGCACCAAGCCTGATAGATCTGTATATGGTAAACAGGGGTTTAACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
CDS GCA 72 bp GGGAGGGAGGCGGGGTCCAAGGCGCGCACGAAGTCCTaGAGCGGCACCGGCTCCATGGTCCCCGCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: GREAGSKARTKS*SGTGSMVPAAL
Trigger: GAGAGCCGCGGGGACCATGGAGCCGGTGCCGCTGCAGGACTTCGTGCGCGCCTTGGACCCCGCCTCCCTCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000427466.1
CDS GCA 72 bp GGTAGCCCCCTGACACCAGGAAGTGCCTGGGCACCTTaGGGCCCTTGCTTGAGGCCAGGACCCGCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: GSPLTPGSAWAP*GPCLRPGPARV
Trigger: CACCCTGGCGGGTCCTGGCCTCAAGCAAGGGCCGCAAGGTGCCCAGGCACTTCCTGGTGTCAGGGGGCTACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS CAA 90 bp AGCCCCCTGACACCAGGAAGTGCCTGGGCACCTTGCGGCCCTTGCTaGAGGCCAGGACCCGCCAGGGTGGTGAGGCTAGGCCATAGACGC +
Preference number: 6 (lower is better)
Translates to: SPLTPGSAWAPCGPC*RPGPARVVRLGHRR
Trigger: GCGTCTATGGCCTAGCCTCACCACCCTGGCGGGTCCTGGCCTCAAGCAAGGGCCGCAAGGTGCCCAGGCACTTCCTGGTGTCAGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS TCA 72 bp CCCTTCTGGGATAGGGGCAGGTGCAGGATGACCTGCTaGCCCTCCATGCCCAGGACACAGCGGGCAGAGCGG +
Preference number: 6 (lower is better)
Translates to: PFWDRGRCRMTC*PSMPRTQRAER
Trigger: CCGCTCTGCCCGCTGTGTCCTGGGCATGGAGGGTCAGCAGGTCATCCTGCACCTGCCCCTATCCCAGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000427466.1
ENST00000456990.1
ENST00000466068.1
CDS GCA 72 bp CTGACACCAGGAAGTGCCTGGGCACCTTGCGGCCCTTaGTTGAGGCCAGGACCCGCCAGGGTGGTGAGGCTA +
Preference number: 6 (lower is better)
Translates to: LTPGSAWAPCGP*LRPGPARVVRL
Trigger: TAGCCTCACCACCCTGGCGGGTCCTGGCCTCAAGCAAGGGCCGCAAGGTGCCCAGGCACTTCCTGGTGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS CCA 72 bp GCTTGCCTTGGTAGCCCCCTGACACCAGGAAGTGCCTaGGCACCTTGCGGCCCTTGCTTGAGGCCAGGACCC +
Preference number: 6 (lower is better)
Translates to: ACLGSPLTPGSA*APCGPCLRPGP
Trigger: GGGTCCTGGCCTCAAGCAAGGGCCGCAAGGTGCCCAGGCACTTCCTGGTGTCAGGGGGCTACCAAGGCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS CCA 72 bp CGGGATTCTCCTCCCTCTCGCCCTCACAGTCCTTTGTaGCCACCACCCGGAGTGGCCGGCCTGGCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: RDSPPSRPHSPL*PPPGVAGLAGK
Trigger: CTTTCCAGCCAGGCCGGCCACTCCGGGTGGTGGCCACAAAGGACTGTGAGGGCGAGAGGGAGGAGAATCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS CAA 72 bp ACTCGGGATTCTCCTCCCTCTCGCCCTCACAGTCCTTaGTGGCCACCACCCGGAGTGGCCGGCCTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: TRDSPPSRPHSP*WPPPGVAGLAG
Trigger: TCCAGCCAGGCCGGCCACTCCGGGTGGTGGCCACAAAGGACTGTGAGGGCGAGAGGGAGGAGAATCCCGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS CAA 90 bp GGGAAAGGGCCTTCCCAGGCCAGGACCTCGCTCAGCAGCAGCGGTTaGATAAAGTGGACGTGCCGGGAGGAGGCGGTGACGTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: GKGPSQARTSLSSSG*IKWTCREEAVTSST
Trigger: CGTGGAGGACGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGGTCCTGGCCTGGGAAGGCCCTTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000442118.5
CDS TCA 72 bp GCCTCTGGCCTTTTTGCAAGGAGCCCACCCACGGGCTaGGGAAGATGGGGCGGCCCTCAGGAACCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: ASGLFARSPPTG*GRWGGPQEPPG
Trigger: TCCTGGAGGTTCCTGAGGGCCGCCCCATCTTCCTCAGCCCGTGGGTGGGCTCCTTGCAAAAAGGCCAGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS TCA 72 bp CCAGCACCTCCAGCCGGTCACCCACAGCCAGGGACGTaGACTCGGGATTCTCCTCCCTCTCGCCCTCACAGT +
Preference number: 6 (lower is better)
Translates to: PAPPAGHPQPGT*TRDSPPSRPHS
Trigger: ACTGTGAGGGCGAGAGGGAGGAGAATCCCGAGTTCACGTCCCTGGCTGTGGGTGACCGGCTGGAGGTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373921.8
ENST00000442118.5
CDS GCA 72 bp CGCTCGCTCAGCAGCAGCGGTTTGATAAAGTGGACGTaGCGGGAGGAGGCGGTGACGTCCTCCACGTCGACC +
Preference number: 6 (lower is better)
Translates to: RSLSSSGLIKWT*REEAVTSSTST
Trigger: GGTCGACGTGGAGGACGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456990.1
CDS CCA 72 bp GCCAGGACCTCGCTCAGCAGCAGCGGTTTGATAAAGTaGACGTGCCGGGAGGAGGCGGTGACGTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: ARTSLSSSGLIK*TCREEAVTSST
Trigger: CGTGGAGGACGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGGTCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000442118.5
CDS CCA 72 bp CTCAGCCGCTCGCTCAGCAGCAGCGGTTTGATAAAGTaGACGTGCCGGGAGGAGGCGGTGACGTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: LSRSLSSSGLIK*TCREEAVTSST
Trigger: CGTGGAGGACGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGCGGCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456990.1
CDS CAA 72 bp CCTTCCCAGGCCAGGACCTCGCTCAGCAGCAGCGGTTaGATAAAGTGGACGTGCCGGGAGGAGGCGGTGACG +
Preference number: 6 (lower is better)
Translates to: PSQARTSLSSSG*IKWTCREEAVT
Trigger: CGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGGTCCTGGCCTGGGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000442118.5
CDS CAA 72 bp GCCTGGTCACTCAGCCGCTCGCTCAGCAGCAGCGGTTaGATAAAGTGGACGTGCCGGGAGGAGGCGGTGACG +
Preference number: 6 (lower is better)
Translates to: AWSLSRSLSSSG*IKWTCREEAVT
Trigger: CGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGCGGCTGAGTGACCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456990.1
CDS GCA 72 bp ACCTCGCTCAGCAGCAGCGGTTTGATAAAGTGGACGTaGCGGGAGGAGGCGGTGACGTCCTCCACGTCGACC +
Preference number: 6 (lower is better)
Translates to: TSLSSSGLIKWT*REEAVTSSTST
Trigger: GGTCGACGTGGAGGACGTCACCGCCTCCTCCCGGCACGTCCACTTTATCAAACCGCTGCTGCTGAGCGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000442118.5
CDS GCA 72 bp GTGGCTATGGGGAGAGACCCCTCTGGCAAGTCTGGCTaGCCCTTGGCCTTCACAACAGTCAGGTCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VAMGRDPSGKSG*PLAFTTVRSSH
Trigger: GTGGCTGGACCTGACTGTTGTGAAGGCCAAGGGGCAGCCAGACTTGCCAGAGGGGTCTCTCCCCATAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
ENST00000467258.1
ENST00000482828.1
CDS CCA 72 bp TTCGGGTTCTCACAGACCACCTTCTGGAGGCGGACCTaGGTGACCTTGATCAGGTCCCCCGTGGAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: FGFSQTTFWRRT*VTLIRSPVERQ
Trigger: CTGCCTCTCCACGGGGGACCTGATCAAGGTCACCCAGGTCCGCCTCCAGAAGGTGGTCTGTGAGAACCCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000442118.5
ENST00000466068.1
CDS CCA 72 bp TGGTCCTGCGCACCTGGAAGTTGGGGGCGAGCTCCATaGTCTGGCTGGTCTTCGGGTTCTCACAGACCACCT +
Preference number: 6 (lower is better)
Translates to: WSCAPGSWGRAP*SGWSSGSHRPP
Trigger: AGGTGGTCTGTGAGAACCCGAAGACCAGCCAGACCATGGAGCTCGCCCCCAACTTCCAGGTGCGCAGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442118.5
CDS CCA 72 bp GTCCTGCGCATGTGCATGATGGCTTGGATCTCATACTaGGGCCGCAGGATCAGGGAATGCCAGGGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: VLRMCMMAWISY*GRRIRECQGRV
Trigger: CACCCTGCCCTGGCATTCCCTGATCCTGCGGCCCCAGTATGAGATCCAAGCCATCATGCACATGCGCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS CCA 72 bp CACTCAGCCGTGTGCATGATGGCTTGGATCTCATACTaGGGCCGCAGGATCAGGGAATGCCAGGGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: HSAVCMMAWISY*GRRIRECQGRV
Trigger: CACCCTGCCCTGGCATTCCCTGATCCTGCGGCCCCAGTATGAGATCCAAGCCATCATGCACACGGCTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466068.1
CDS CCA 72 bp CCCCAGCCTGGTCACTCAGCCGTGTGCATGATGGCTTaGATCTCATACTGGGGCCGCAGGATCAGGGAATGC +
Preference number: 6 (lower is better)
Translates to: PQPGHSAVCMMA*ISYWGRRIREC
Trigger: GCATTCCCTGATCCTGCGGCCCCAGTATGAGATCCAAGCCATCATGCACACGGCTGAGTGACCAGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466068.1
CDS CCA 72 bp ACCTTGCCTGTGAGCCTGAAGGAGGAAGAACACTGCTaGCAGAAGGCCTGGGTGTGGGGCTCTGGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: TLPVSLKEEEHC*QKAWVWGSGAG
Trigger: TCCTGCTCCAGAGCCCCACACCCAGGCCTTCTGCCAGCAGTGTTCTTCCTCCTTCAGGCTCACAGGCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CAA 72 bp ACGTCCTCCACGTCGACCTCCAGGGTAGAAGGGATCTaGACAATGGTCCTGCGCACCTGGAAGTTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: TSSTSTSRVEGI*TMVLRTWKLGA
Trigger: CGCCCCCAACTTCCAGGTGCGCAGGACCATTGTCAAGATCCCTTCTACCCTGGAGGTCGACGTGGAGGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442118.5
CDS CAA 90 bp GAGGTCAGAGGGTCAGTGGGGTGGCTGGTGTCCTTGGCCACCACCTaGACCTCACAAGGCAGTGAAAACTGGGCAGTCAGATCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: EVRGSVGWLVSLATT*TSQGSENWAVRSAR
Trigger: CCTGGCAGATCTGACTGCCCAGTTTTCACTGCCTTGTGAGGTCAAGGTGGTGGCCAAGGACACCAGCCACCCCACTGACCCTCTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
ENST00000467258.1
ENST00000482828.1
CDS CAA 90 bp AGCTCCCTGATCAGCACCAAGATTCCAACGCACAGAGGGGAAAAGTaGTGGTTCCAGGGCGACAGCAGTGACCGGGCCCAGAGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: SSLISTKIPTHRGEK*WFQGDSSDRAQSPS
Trigger: GGAGGGACTCTGGGCCCGGTCACTGCTGTCGCCCTGGAACCACAACTTTTCCCCTCTGTGCGTTGGAATCTTGGTGCTGATCAGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CCA 72 bp AGGACGAGGTCTTTCAGGGCTGGATCCTGTAGGACCTaGAGCAGAGTTCGAGGGGCACTAGGCTCCCATGTC +
Preference number: 6 (lower is better)
Translates to: RTRSFRAGSCRT*SRVRGALGSHV
Trigger: GACATGGGAGCCTAGTGCCCCTCGAACTCTGCTCCAGGTCCTACAGGATCCAGCCCTGAAAGACCTCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000456990.1
ENST00000466068.1
CDS CAA 72 bp TCCCCAGCCTGGTCACTCAGCCGTGTGCATGATGGCTaGGATCTCATACTGGGGCCGCAGGATCAGGGAATG +
Preference number: 6 (lower is better)
Translates to: SPAWSLSRVHDG*DLILGPQDQGM
Trigger: CATTCCCTGATCCTGCGGCCCCAGTATGAGATCCAAGCCATCATGCACACGGCTGAGTGACCAGGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466068.1
CDS CCA 72 bp GACTTGAGAAGACCTGGAAGTTGGGGGCGAGCTCCATaGTCTGGCTGGTCTTCGGGTTCTCACAGACCACCT +
Preference number: 6 (lower is better)
Translates to: DLRRPGSWGRAP*SGWSSGSHRPP
Trigger: AGGTGGTCTGTGAGAACCCGAAGACCAGCCAGACCATGGAGCTCGCCCCCAACTTCCAGGTCTTCTCAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373927.7
CDS CCA 72 bp GAGCCACAAAGCCTTGTGACGACGCCTGAGCTGAGGTaGCCCAGAAGAAAGAGGACTTCCATTGCGTTCCCC +
Preference number: 6 (lower is better)
Translates to: EPQSLVTTPELR*PRRKRTSIAFP
Trigger: GGGGAACGCAATGGAAGTCCTCTTTCTTCTGGGCCACCTCAGCTCAGGCGTCGTCACAAGGCTTTGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CAA 72 bp TTCTGTTTGGCCCCGTTTAGCAGGTCCTCTCTGGCCTaGGAGCAGGTAAGGTCCCTGCCCCGACAGAACTCT +
Preference number: 6 (lower is better)
Translates to: FCLAPFSRSSLA*EQVRSLPRQNS
Trigger: AGAGTTCTGTCGGGGCAGGGACCTTACCTGCTCCAAGGCCAGAGAGGACCTGCTAAACGGGGCCAAACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CAA 72 bp ATCAGCACCAAGATTCCAACGCACAGAGGGGAAAAGTaGTGGTTCCAGGGCGACAGCAGTGACCGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: ISTKIPTHRGEK*WFQGDSSDRAQ
Trigger: CTGGGCCCGGTCACTGCTGTCGCCCTGGAACCACAACTTTTCCCCTCTGTGCGTTGGAATCTTGGTGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CAA 90 bp CCCTTCCTGTGGGCAGGAATCTTGCTGTACGTACTGGAGCCATCCTaGATGAACTCTGGCAAGGTCTTCGCCTTGGGTTTGGGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: PFLWAGILLYVLEPS*MNSGKVFALGLGSR
Trigger: TCGGCTGCCCAAACCCAAGGCGAAGACCTTGCCAGAGTTCATCAAGGATGGCTCCAGTACGTACAGCAAGATTCCTGCCCACAGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
ENST00000467258.1
ENST00000492877.1
CDS CCA 72 bp CTTGAGAAGATGTGCATGATGGCTTGGATCTCATACTaGGGCCGCAGGATCAGGGAATGCCAGGGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: LEKMCMMAWISY*GRRIRECQGRV
Trigger: CACCCTGCCCTGGCATTCCCTGATCCTGCGGCCCCAGTATGAGATCCAAGCCATCATGCACATCTTCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373925.5
CDS CAA 72 bp ACGTCCTCCACGTCGACCTCCAGGGTAGAAGGGATCTaGACAATGGTCCTGCGCATGTGCATGATGGCTTGG +
Preference number: 6 (lower is better)
Translates to: TSSTSTSRVEGI*TMVLRMCMMAW
Trigger: CCAAGCCATCATGCACATGCGCAGGACCATTGTCAAGATCCCTTCTACCCTGGAGGTCGACGTGGAGGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000456990.1
CDS TCA 72 bp CGTAAGAAAGGAGCCACAAAGCCTTGTGACGACGCCTaGGCTGAGGTGGCCCAGAAGAAAGAGGACTTCCAT +
Preference number: 6 (lower is better)
Translates to: RKKGATKPCDDA*AEVAQKKEDFH
Trigger: ATGGAAGTCCTCTTTCTTCTGGGCCACCTCAGCTCAGGCGTCGTCACAAGGCTTTGTGGCTCCTTTCTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS TCA 72 bp AGAAAGCAGCTGCAGAGGATATCACAGGTCTACTGGTaGGAAAAAGGACGCTCGGAGGAGTACCCAGCACAG +
Preference number: 6 (lower is better)
Translates to: RKQLQRISQVYW*EKGRSEEYPAQ
Trigger: CTGTGCTGGGTACTCCTCCGAGCGTCCTTTTTCTCACCAGTAGACCTGTGATATCCTCTGCAGCTGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CCA 72 bp GGACACCGGTGTGTAACTCAGAAGCACTGTGAGAATTaGTTGGGACAAAGCATATCAGGGGCCTGCCACAGA +
Preference number: 6 (lower is better)
Translates to: GHRCVTQKHCEN*LGQSISGACHR
Trigger: TCTGTGGCAGGCCCCTGATATGCTTTGTCCCAACCAATTCTCACAGTGCTTCTGAGTTACACACCGGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CAA 72 bp TGGGCAGGAATCTTGCTGTACGTACTGGAGCCATCCTaGATGAACTCTGGCAAGGTCTTCGCCTTGGGTTTG +
Preference number: 6 (lower is better)
Translates to: WAGILLYVLEPS*MNSGKVFALGL
Trigger: CAAACCCAAGGCGAAGACCTTGCCAGAGTTCATCAAGGATGGCTCCAGTACGTACAGCAAGATTCCTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328928.11
ENST00000373921.8
ENST00000373925.5
ENST00000373927.7
ENST00000456990.1
ENST00000467258.1
ENST00000492877.1
CDS CAA 90 bp GAAGCAGGACACCGGTGTGTAACTCAGAAGCACTGTGAGAATTGGTaGGGACAAAGCATATCAGGGGCCTGCCACAGAGTAAGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: EAGHRCVTQKHCENW*GQSISGACHRVSRS
Trigger: TGACCTGCTTACTCTGTGGCAGGCCCCTGATATGCTTTGTCCCAACCAATTCTCACAGTGCTTCTGAGTTACACACCGGTGTCCTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS GCA 72 bp GGCCTGCCACAGAGTAAGCAGGTCACAGAAAGCAGCTaGAGAGGATATCACAGGTCTACTGGTGAGAAAAAG +
Preference number: 6 (lower is better)
Translates to: GLPQSKQVTESS*RGYHRSTGEKK
Trigger: CTTTTTCTCACCAGTAGACCTGTGATATCCTCTGCAGCTGCTTTCTGTGACCTGCTTACTCTGTGGCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CCA 72 bp GCAATCCTAAGACTTGAGAAGATGTGCATGATGGCTTaGATCTCATACTGGGGCCGCAGGATCAGGGAATGC +
Preference number: 6 (lower is better)
Translates to: AILRLEKMCMMA*ISYWGRRIREC
Trigger: GCATTCCCTGATCCTGCGGCCCCAGTATGAGATCCAAGCCATCATGCACATCTTCTCAAGTCTTAGGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373925.5
CDS CCA 72 bp AGGTCTGTCGGTTCTGGAAAGTACCCTTTTCAGCACTaGCACAAGGCCTGTGTTTCGGATGTTTCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: RSVGSGKYPFQH*HKACVSDVSVQ
Trigger: CTGGACTGAAACATCCGAAACACAGGCCTTGTGCCAGTGCTGAAAAGGGTACTTTCCAGAACCGACAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CAA 72 bp CACCGGTGTGTAACTCAGAAGCACTGTGAGAATTGGTaGGGACAAAGCATATCAGGGGCCTGCCACAGAGTA +
Preference number: 6 (lower is better)
Translates to: HRCVTQKHCENW*GQSISGACHRV
Trigger: TACTCTGTGGCAGGCCCCTGATATGCTTTGTCCCAACCAATTCTCACAGTGCTTCTGAGTTACACACCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS TCA 72 bp TATTTGACCTCTCTGTGCCTCTCACCTTCTCAACTGTaGAGCAGGACACCGGTGTGTAACTCAGAAGCACTG +
Preference number: 6 (lower is better)
Translates to: YLTSLCLSPSQL*SRTPVCNSEAL
Trigger: CAGTGCTTCTGAGTTACACACCGGTGTCCTGCTTCACAGTTGAGAAGGTGAGAGGCACAGAGAGGTCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS GCA 72 bp CCACTCAGGAGTCATCTTGTAATTTCCACTGCCACCTaGTGCCTACCACACGTGATTAAATACGAGTCACCC +
Preference number: 6 (lower is better)
Translates to: PLRSHLVISTAT*CLPHVIKYESP
Trigger: GGGTGACTCGTATTTAATCACGTGTGGTAGGCAGCAGGTGGCAGTGGAAATTACAAGATGACTCCTGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS GCA 72 bp CCAGAAGAAAGAGGACTTCCATTGCGTTCCCCCATGTaGCAGATGCTACATGACGTCTGCTCTTTAATCCTC +
Preference number: 6 (lower is better)
Translates to: PEERGLPLRSPM*QMLHDVCSLIL
Trigger: GAGGATTAAAGAGCAGACGTCATGTAGCATCTGGCACATGGGGGAACGCAATGGAAGTCCTCTTTCTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS TCA 72 bp CAGAAGGTTCCAGAAGATGGAGCTGAGGTCCATCAATaGCTAAGAAAGGAGTTAGGAGGCCTTTCTGACAGC +
Preference number: 6 (lower is better)
Translates to: QKVPEDGAEVHQ*LRKELGGLSDS
Trigger: GCTGTCAGAAAGGCCTCCTAACTCCTTTCTTAGTCATTGATGGACCTCAGCTCCATCTTCTGGAACCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS GCA 72 bp CTCAGGAGTCATCTTGTAATTTCCACTGCCACCTGCTaGCTACCACACGTGATTAAATACGAGTCACCCAAG +
Preference number: 6 (lower is better)
Translates to: LRSHLVISTATC*LPHVIKYESPK
Trigger: CTTGGGTGACTCGTATTTAATCACGTGTGGTAGGCAGCAGGTGGCAGTGGAAATTACAAGATGACTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS GCA 72 bp TTGCGTTCCCCCATGTGCCAGATGCTACATGACGTCTaGTCTTTAATCCTCAAGTTACCCTCTGAGTGGTTT +
Preference number: 6 (lower is better)
Translates to: LRSPMCQMLHDV*SLILKLPSEWF
Trigger: AAACCACTCAGAGGGTAACTTGAGGATTAAAGAGCAGACGTCATGTAGCATCTGGCACATGGGGGAACGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS TCA 72 bp TTGGGCAGCCGAGCGTGTTGCTGCAATCCTAAGACTTaGGAAGACTTTGGGAGAAAAAGCAGAAATCATCAG +
Preference number: 6 (lower is better)
Translates to: LGSRACCCNPKT*EDFGRKSRNHQ
Trigger: CTGATGATTTCTGCTTTTTCTCCCAAAGTCTTCTCAAGTCTTAGGATTGCAGCAACACGCTCGGCTGCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS GCA 72 bp TTTCAGGCTATGACCTCTCAAGACCCCTGGTGTTTTTaGTACATGCATGTGAAATATTCTCTGGCAAGGGAG +
Preference number: 6 (lower is better)
Translates to: FQAMTSQDPWCF*YMHVKYSLARE
Trigger: CTCCCTTGCCAGAGAATATTTCACATGCATGTAGCAAAAACACCAGGGGTCTTGAGAGGTCATAGCCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492877.1
CDS CCA 72 bp GACGTCTGCTCTTTAATCCTCAAGTTACCCTCTGAGTaGTTTCAATTCCCAGTTTATGTAGGAGAGAAAGTG +
Preference number: 6 (lower is better)
Translates to: DVCSLILKLPSE*FQFPVYVGEKV
Trigger: CACTTTCTCTCCTACATAAACTGGGAATTGAAACCACTCAGAGGGTAACTTGAGGATTAAAGAGCAGACGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492877.1