RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THEGL (Homo sapiens)

Ensembl gene IDs: ENSG00000249693

Ensembl transcript IDs: ENST00000510716.1, ENST00000512175.3

Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTTACATAACCAGGGTCTaGCTGTTGTGGCTTTCTGTA +
Preference number: 2 (lower is better)
Translates to: EARGECKLTVPQQGTKSSYITRV*LLWLSV
Trigger: TACAGAAAGCCACAACAGTCAGACCCTGGTTATGTA...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTGGCCTCGCGGGACTTaGGGGGCTCACGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGEARGECKLTVPQQGTKWPRGT*GAHGCG
Trigger: GCCACACCCGTGAGCCCCGCAAGTCCCGCGAGGCCA...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TTTGTGGGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGACGGGTGTGGCGGAGCTaGCGGGGTTCACGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: FVGGEARGECKLTVPQQGRVWRS*RGSRAL
Trigger: CAAGGCCCGTGAACCCCGCCAGCTCCGCCACACCCG...TCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCCCACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGCGGGGCTCACGGGTGTaGCGGAGCTGGCGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GGEARGECKLTVPQQGTKRGSRV*RSWRGS
Trigger: TGAACCCCGCCAGCTCCGCCACACCCGTGAGCCCCG...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TTTGTGGGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTCACCCTCCCGACTaGTTGCCCAGGCGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: FVGGEARGECKLTVPQQGTHPPD*LPRRSL
Trigger: CAAACTGCGCCTGGGCAACCAGTCGGGAGGGTGAGT...TCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCCCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATCCCAGGAAAGACAGCTaGGGCCGTGGCGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNPRKDS*GRGGAL
Trigger: CAGAGCCCCGCCACGGCCTCAGCTGTCTTTCCTGGG...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGGGGGGAGATCATTACTaGGGCGCTGGGAAGCAACTC +
Preference number: 4 (lower is better)
Translates to: GGEARGECKLTVPQQGTKGGDHY*GAGKQL
Trigger: GAGTTGCTTCCCAGCGCCGCAGTAATGATCTCCCCC...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCGGACTCGTCTCTCTaGTCTTGCTCCCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GGEARGECKLTVPQQGTKSDSSL*SCSLTS
Trigger: GGAGGTCAGGGAGCAAGACCAGAGAGACGAGTCCGA...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTGGGGTTCACGGGCCTTaGGGAGTTTGGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: EARGECKLTVPQQGTKSSGVHGP*GVWGLH
Trigger: ATGCAGCCCCCAAACTCCTCAAGGCCCGTGAACCCC...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp TTTGTGGGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAATTTCTGTTGAGACCTaGCCATCGGTCACCTCGGAC +
Preference number: 4 (lower is better)
Translates to: FVGGEARGECKLTVPQQGISVET*PSVTSD
Trigger: GTCCGAGGTGACCGATGGGCAGGTCTCAACAGAAAT...TCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCCCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp TTTGTGGGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAGGGGTGAATGTAAACTaGCAGTACCGCAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: FVGGEARGECKLTVPQQGGVNVN*QYRNRE
Trigger: TTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCC...TCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCCCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTGGTCTTGCTCCCTaGCCTCCTCGGGTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GECKLTVPQQGTKSSNMCSGLAP*PPRVPR
Trigger: CCGAGGAACCCGAGGAGGTCAGGGAGCAAGACCAGA...ACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTGTGGCGGGGCTCTGGTaGTCAGAGAGGGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: GECKLTVPQQGTKSSNMCVAGLW*SERGRS
Trigger: TGATCTCCCCCTCTCTGATCACCAGAGCCCCGCCAC...ACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGACGTGTAAGAGGTTGTaGCAACTCCCAGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: GGEARGECKLTVPQQGTKTCKRL*QLPDPL
Trigger: CAAAGGATCTGGGAGTTGTCACAACCTCTTACACGT...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGGGGTTGTCTAAACAATaGAGGAGGAGTGATCTCCCA +
Preference number: 4 (lower is better)
Translates to: GGEARGECKLTVPQQGTKGLSKQ*RRSDLP
Trigger: TGGGAGATCACTCCTCCTGCATTGTTTAGACAACCC...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATTCGTCTCTCTGGTCTTaGTCCCTGACCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNSSLWS*SLTSSG
Trigger: ACCCGAGGAGGTCAGGGAGCAAGACCAGAGAGACGA...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAGTCTTTTGGTCAGCTaGGCCTTCAAAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: EARGECKLTVPQQGTKSSSLLVS*AFKAPW
Trigger: CCAGGGTGCTTTGAAGGCTCAGCTGACCAAAAGACT...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp TTTGTGGGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACAATGCAGGAGGAGTaGTCTCCCAAATTACAGACT +
Preference number: 4 (lower is better)
Translates to: FVGGEARGECKLTVPQQGTMQEE*SPKLQT
Trigger: AGTCTGTAATTTGGGAGATCACTCCTCCTGCATTGT...TCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCCCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGGATAGTTTGGGTCTGTaGCTTTGGCTACTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: GGEARGECKLTVPQQGTKDSLGL*LWLLRV
Trigger: AACTCTCAGTAGCCAAAGGCACAGACCCAAACTATC...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTATGGAGTTCGTAAGGTaGATAGGAGTCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: EARGECKLTVPQQGTKSSMEFVR*IGVPGL
Trigger: AAGCCCCGGGACTCCTATGCACCTTACGAACTCCAT...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGGGTTCTCAAGTCTTTTaGTCAGCTGAGCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: GGEARGECKLTVPQQGTKGSQVF*SAEPSK
Trigger: CTTTGAAGGCTCAGCTGACCAAAAGACTTGAGAACC...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTGCAACTCGGTTTCCTTaGCCTCGCGGGACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: ECKLTVPQQGTKSSNMCSATRFP*PRGTCG
Trigger: CCCGCAAGTCCCGCGAGGCCAAGGAAACCGAGTTGC...AGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGAAGACAGCTGAGGCCGTaGCGGGGCTCTGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRRQLRP*RGSGDQ
Trigger: CTGATCACCAGAGCCCCGCCACGGCCTCAGCTGTCT...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAGTGGATATTTCTGTTaGGACCTGCCCATCGGTCAC +
Preference number: 4 (lower is better)
Translates to: EARGECKLTVPQQGTKSSSGYFC*DLPIGH
Trigger: GTGACCGATGGGCAGGTCTCAACAGAAATATCCACT...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATGAGTGTCGAGAATCCTaGGCACAATGGGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNECRES*AQWASG
Trigger: TCCAGAAGCCCATTGTGCTCAGGATTCTCGACACTC...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGAACCCTCCCGACTGGTTaGCCAGGCGCAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRTLPTG*PGAVCS
Trigger: AGAGCAAACTGCGCCTGGGCAACCAGTCGGGAGGGT...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATGCCTTCAAAGCACCCTaGGAAACAGGGCGAATAGGA +
Preference number: 4 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNAFKAP*ETGRIG
Trigger: TCCTATTCGCCCTGTTTCCCAGGGTGCTTTGAAGGC...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TTTGTGGGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAAGACTTCGGAGCAAGTaGATATTTCTGTTGAGACCT +
Preference number: 4 (lower is better)
Translates to: FVGGEARGECKLTVPQQGRLRSK*IFLLRP
Trigger: AGGTCTCAACAGAAATATCCACTTGCTCCGAAGTCT...TCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCCCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TTTGTGGGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAAACTTGATCCTTGGGTaGGCAAGCTCTATAATTCTT +
Preference number: 4 (lower is better)
Translates to: FVGGEARGECKLTVPQQGNLILG*ASSIIL
Trigger: AAGAATTATAGAGCTTGCCCACCCAAGGATCAAGTT...TCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTGGATTAGCTAGTTCCTaGATCCTAGGTGATGCTTTG +
Preference number: 4 (lower is better)
Translates to: EARGECKLTVPQQGTKSSGLASS*ILGDAL
Trigger: CAAAGCATCACCTAGGATTCAGGAACTAGCTAATCC...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TTTGTGGGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAAAACAGTTTTCTGTCTaGAGTTCCCCATTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FVGGEARGECKLTVPQQGKQFSV*SSPLLF
Trigger: AAAAAGCAATGGGGAACTCCAGACAGAAAACTGTTT...TCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCCCACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATGTAGACACTGTCTTTTaGATCCATTGGGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNVDTVF*IHWAVT
Trigger: TGTCACAGCCCAATGGATTCAAAAGACAGTGTCTAC...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGAACAGACCCTCTAACTTaGTCCTTGGGTGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRTDPLT*SLGGQA
Trigger: AGCTTGCCCACCCAAGGATCAAGTTAGAGGGTCTGT...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTGGCAGGAAACTTCCTTaGGCTGGGCAAGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ECKLTVPQQGTKSSNMCSGRKLP*AGQGSQ
Trigger: TTGAGAACCTTGCCCAGCCCAAGGAAGTTTCCTGCC...AGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGAGGCTGTGACAGCCTCTaGATCCTTTTGGAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRGCDSL*ILLEGC
Trigger: ACAACCCTCCAAAAGGATCCAGAGGCTGTCACAGCC...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATCATTACTGCGGCGCTaGGAAGCAACTCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRSLLRR*EATRFP
Trigger: AGGAAACCGAGTTGCTTCCCAGCGCCGCAGTAATGA...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATGGGCGAATAGGATCTTaGTTTCCCCAAAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNGRIGS*FPQNSF
Trigger: AAAACTGTTTTGGGGAAATCAAGATCCTATTCGCCC...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp AAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATACGAATCCATTGGGCTGTaGCAGCCTCTGGATCCTTTT +
Preference number: 4 (lower is better)
Translates to: KLTVPQQGTKSSNMCSRYESIGL*QPLDPF
Trigger: AAAAGGATCCAGAGGCTGTCACAGCCCAATGGATTC...GTATCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTTTGCTGAGTTATCACTaGAGGGTCTATTTAGTAGAC +
Preference number: 4 (lower is better)
Translates to: EARGECKLTVPQQGTKSSLLSYH*RVYLVD
Trigger: GTCTACTAAATAGACCCTTCAGTGATAACTCAGCAA...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp AAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATACAGCACAATGGGCTTCTaGAAGACTTCGGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: KLTVPQQGTKSSNMCSRYSTMGF*KTSEQV
Trigger: CACTTGCTCCGAAGTCTTCCAGAAGCCCATTGTGCT...GTATCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGAGAGGTACAGGACGGATaGGCAGTTCACTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSREVQDG*AVHFFV
Trigger: GACAAAGAAGTGAACTGCCCATCCGTCCTGTACCTC...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTAGTAGCATAAGATACTaGCCAATGGGCATCACGGTC +
Preference number: 4 (lower is better)
Translates to: GECKLTVPQQGTKSSNMCSSIRY*PMGITV
Trigger: GACCGTGATGCCCATTGGCCAGTATCTTATGCTACT...ACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTACATAACCAGGGTCTaGCTGTTGTGGCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: GECKLTVPQQGTKSSNMCYITRV*LLWLSV
Trigger: TACAGAAAGCCACAACAGTCAGACCCTGGTTATGTA...ACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp AAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATACACAGGAAACAGGATTTaGACCCAGGAAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: KLTVPQQGTKSSNMCSRYTGNRI*TQERQL
Trigger: CAGCTGTCTTTCCTGGGTGCAAATCCTGTTTCCTGT...GTATCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTGAAACTTCCTTGGGCTaGGCAAGGTTCTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ECKLTVPQQGTKSSNMCSETSLG*ARFSSL
Trigger: AAGACTTGAGAACCTTGCCCAGCCCAAGGAAGTTTC...AGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATTGCTTTCAAAGCAGCTaGCTTGGTTTTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNCFQSS*LGFKDI
Trigger: GATGTCTTTAAAACCAAGCCAGCTGCTTTGAAAGCA...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATACTCAGGGTAGAAAGTaGAATCTTGGTTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNTQGRK*NLGLHF
Trigger: AAAATGCAAACCAAGATTTCACTTTCTACCCTGAGT...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGAGAACTTAGAAACTCTTaGTTCTCCATTCGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRELRNS*FSIRAR
Trigger: TCTGGCGCGAATGGAGAACCAAGAGTTTCTAAGTTC...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp GGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTCTTGATGAACAGACTTaGACTTCGCTAGAGCTATTG +
Preference number: 4 (lower is better)
Translates to: GECKLTVPQQGTKSSNMCLDEQT*TSLELL
Trigger: CAATAGCTCTAGCGAAGTCCAAGTCTGTTCATCAAG...ACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGAAAGAGAATCTCTTGCTaGGTTATCACTGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRKRISC*VITEGS
Trigger: AGACCCTTCAGTGATAACTCAGCAAGAGATTCTCTT...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp AAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATACTTCCTGAATCCTAGGTaGTGCTTTGGAATGAGTAGT +
Preference number: 4 (lower is better)
Translates to: KLTVPQQGTKSSNMCSRYFLNPR*CFGMSS
Trigger: ACTACTCATTCCAAAGCATCACCTAGGATTCAGGAA...GTATCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATTGGGTCTGTGCCTTTaGCTACTGAGAGTTGTAATA +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRLGLCL*LLRVVI
Trigger: TATTACAACTCTCAGTAGCCAAAGGCACAGACCCAA...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR GCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATATAATTCTTGGAGTTaGAATCGCACTCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRYNSWS*NRTQGR
Trigger: TCTACCCTGAGTGCGATTGCAACTCCAAGAATTATA...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGAAAGCTCTATAATTCTTaGAGTTGCAATCGCACTCAG +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRKLYNS*SCNRTQ
Trigger: CTGAGTGCGATTGCAACTCCAAGAATTATAGAGCTT...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR TCA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATTGCTTTTTAGGCTTTaGAAGATTTGGGGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRLLFRL*KIWGSL
Trigger: AAGAGAACCCCAAATCTTTCAAAGCCTAAAAAGCAA...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS GCA 90 bp AGGCCGTGGCGGGGCTCTGGTGATCAGAGAGGGGGAGATCATTACTaGGGCGCTGGGAAGCAACTCGGTTTCCTTGGCCTCGCGGGACTT +
Preference number: 5 (lower is better)
Translates to: RPWRGSGDQRGGDHY*GAGKQLGFLGLAGL
Trigger: AAGTCCCGCGAGGCCAAGGAAACCGAGTTGCTTCCCAGCGCCGCAGTAATGATCTCCCCCTCTCTGATCACCAGAGCCCCGCCACGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CCA 90 bp TGCCCATCGGTCACCTCGGACGGCGCAGATGAACTTAGAAACTCTTaGTTCTCCATTCGCGCCAGAAGCTTCTGTCGCGCGCGGGACTCA +
Preference number: 5 (lower is better)
Translates to: CPSVTSDGADELRNS*FSIRARSFCRARDS
Trigger: TGAGTCCCGCGCGCGACAGAAGCTTCTGGCGCGAATGGAGAACCAAGAGTTTCTAAGTTCATCTGCGCCGTCCGAGGTGACCGATGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS TCA 90 bp GAGGCTCATCACATTCCTCGGACTCGTCTCTCTGGTCTTGCTCCCTaGCCTCCTCGGGTTCCTCGGGATTCTCGTGTTTCTCGGGATCCT +
Preference number: 5 (lower is better)
Translates to: EAHHIPRTRLSGLAP*PPRVPRDSRVSRDP
Trigger: AGGATCCCGAGAAACACGAGAATCCCGAGGAACCCGAGGAGGTCAGGGAGCAAGACCAGAGAGACGAGTCCGAGGAATGTGATGAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTCGGGCCTTGAGGAGTTaGGGGGCTGCATGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: EARGECKLTVPQQGTKSSRALRS*GAAWGP
Trigger: TGGGCCCCATGCAGCCCCCAAACTCCTCAAGGCCCG...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATTTGGCCTCGCGGGACTaGCGGGGCTCACGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNLASRD*RGSRVW
Trigger: CCACACCCGTGAGCCCCGCAAGTCCCGCGAGGCCAA...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS TCA 90 bp GGATTCTCGTGTTTCTCGGGATCCTCGGACTCCTCAAGCTCTCTGTaGGTGTCGAGAATCCTGAGCACAATGGGCTTCTGGAAGACTTCG +
Preference number: 5 (lower is better)
Translates to: GFSCFSGSSDSSSSL*VSRILSTMGFWKTS
Trigger: CGAAGTCTTCCAGAAGCCCATTGTGCTCAGGATTCTCGACACTCACAGAGAGCTTGAGGAGTCCGAGGATCCCGAGAAACACGAGAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS GCA 90 bp GGCTTCTGGAAGACTTCGGAGCAAGTGGATATTTCTGTTGAGACCTaGCCATCGGTCACCTCGGACGGCGCAGATGAACTTAGAAACTCT +
Preference number: 5 (lower is better)
Translates to: GFWKTSEQVDISVET*PSVTSDGADELRNS
Trigger: AGAGTTTCTAAGTTCATCTGCGCCGTCCGAGGTGACCGATGGGCAGGTCTCAACAGAAATATCCACTTGCTCCGAAGTCTTCCAGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATCTCGTCTCTCTGGTCTaGCTCCCTGACCTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNLVSLV*LPDLLG
Trigger: CCCGAGGAGGTCAGGGAGCAAGACCAGAGAGACGAG...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTGTCTTTTGAATCCATaGGGCTGTGACAGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GGEARGECKLTVPQQGTKCLLNP*GCDSLW
Trigger: CCAGAGGCTGTCACAGCCCAATGGATTCAAAAGACA...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTCACCCTCCCGACTGGTaGCCCAGGCGCAGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: GECKLTVPQQGTKSSNMCHPPDW*PRRSLL
Trigger: GAGCAAACTGCGCCTGGGCAACCAGTCGGGAGGGTG...ACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTCGGGGTTCACGGGCCTaGAGGAGTTTGGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ECKLTVPQQGTKSSNMCSRGSRA*RSLGAA
Trigger: TGCAGCCCCCAAACTCCTCAAGGCCCGTGAACCCCG...AGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATTGGCAGGAAACTTCCTaGGGCTGGGCAAGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNWQETS*GWARFS
Trigger: TGAGAACCTTGCCCAGCCCAAGGAAGTTTCCTGCCA...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGACAGCTGTGGTAGTATaGAGCCCTGTTAGGTACATA +
Preference number: 5 (lower is better)
Translates to: GGEARGECKLTVPQQGTKTAVVV*SPVRYI
Trigger: TATGTACCTAACAGGGCTCAATACTACCACAGCTGT...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp AAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATACAGCAACTCGGTTTCCTaGGCCTCGCGGGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: KLTVPQQGTKSSNMCSRYSNSVS*ASRDLR
Trigger: CCGCAAGTCCCGCGAGGCCAAGGAAACCGAGTTGCT...GTATCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GGAGGGGAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTTCAAAGCAGCTGGCTaGGTTTTAAAGACATCTGGA +
Preference number: 5 (lower is better)
Translates to: GGEARGECKLTVPQQGTKFKAAG*VLKTSG
Trigger: TCCAGATGTCTTTAAAACCAAGCCAGCTGCTTTGAA...CTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTCCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS TCA 90 bp GGGTCTGACTGTTGTGGCTTTCTGTATTTAACGTGTAAGAGGTTGTaGCAACTCCCAGATCCTTTGAGAACACTGTGCTTTCAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GSDCCGFLYLTCKRL*QLPDPLRTLCFQSS
Trigger: GCTGCTTTGAAAGCACAGTGTTCTCAAAGGATCTGGGAGTTGTCACAACCTCTTACACGTTAAATACAGAAAGCCACAACAGTCAGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CCA 90 bp TTTAGTAGACACTGTCTTTTGAATCCATTGGGCTGTGACAGCCTCTaGATCCTTTTGGAGGGTTGTCTAAACAATGCAGGAGGAGTGATC +
Preference number: 5 (lower is better)
Translates to: FSRHCLLNPLGCDSL*ILLEGCLNNAGGVI
Trigger: GATCACTCCTCCTGCATTGTTTAGACAACCCTCCAAAAGGATCCAGAGGCTGTCACAGCCCAATGGATTCAAAAGACAGTGTCTACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS-3UTR CAA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAGCCTCTGGATCCTTTaGGAGGGTTGTCTAAACAAT +
Preference number: 5 (lower is better)
Translates to: EARGECKLTVPQQGTKSSSLWIL*EGCLNN
Trigger: ATTGTTTAGACAACCCTCCAAAAGGATCCAGAGGCT...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTTTTGGGTCTGTGCCTTaGGCTACTGAGAGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: EARGECKLTVPQQGTKSSFGSVP*ATESCN
Trigger: ATTACAACTCTCAGTAGCCAAAGGCACAGACCCAAA...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GAAGCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTTTGAAGGATGATAGTTaGGGTCTGTGCCTTTGGCTA +
Preference number: 5 (lower is better)
Translates to: EARGECKLTVPQQGTKSSLKDDS*GLCLWL
Trigger: TAGCCAAAGGCACAGACCCAAACTATCATCCTTCAA...AGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp AAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGATACCACAGACCCTCTAACTaGATCCTTGGGTGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: KLTVPQQGTKSSNMCSRYHRPSN*ILGWAS
Trigger: GCTTGCCCACCCAAGGATCAAGTTAGAGGGTCTGTG...GTATCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GCAAGGGGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATCAACTCCCAGATCCTTaGAGAACACTGTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: ARGECKLTVPQQGTKSSNQLPDP*RTLCFQ
Trigger: TTGAAAGCACAGTGTTCTCAAAGGATCTGGGAGTTG...ATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACCCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GGTGAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTGATCCTTTTGGAGGGTaGTCTAAACAATGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GECKLTVPQQGTKSSNMCDPFGG*SKQCRR
Trigger: CCTCCTGCATTGTTTAGACAACCCTCCAAAAGGATC...ACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGACACAGGAAACAGGATTaGCACCCAGGAAAGACAGCT +
Preference number: 5 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRHRKQD*HPGKTA
Trigger: AGCTGTCTTTCCTGGGTGCAAATCCTGTTTCCTGTG...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp TGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGAAAGTGGATATTTCTGTaGAGACCTGCCCATCGGTCA +
Preference number: 5 (lower is better)
Translates to: CKLTVPQQGTKSSNMCSRKWIFL*RPAHRS
Trigger: TGACCGATGGGCAGGTCTCAACAGAAATATCCACTT...TCTAGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTGGGCAGTTCACTTCTTaGTCTTTCATAGCACAGACC +
Preference number: 5 (lower is better)
Translates to: ECKLTVPQQGTKSSNMCSGQFTS*SFIAQT
Trigger: GGTCTGTGCTATGAAAGACAAAGAAGTGAACTGCCC...AGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CCA 90 bp AGAACACTGTGCTTTCAAAGCAGCTGGCTTGGTTTTAAAGACATCTaGATCATAATACACAATACGCACAGGAGCCCTCTTATTTGGATT +
Preference number: 5 (lower is better)
Translates to: RTLCFQSSWLGFKDI*IIIHNTHRSPLIWI
Trigger: AATCCAAATAAGAGGGCTCCTGTGCGTATTGTGTATTATGATCCAGATGTCTTTAAAACCAAGCCAGCTGCTTTGAAAGCACAGTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS-3UTR CAA 90 bp GAATGTAAACTGACAGTACCGCAACAGGGAACTAAGTCATCTAATATGTGTTCTAGTAGACACTGTCTTTaGAATCCATTGGGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: ECKLTVPQQGTKSSNMCSSRHCL*NPLGCD
Trigger: GTCACAGCCCAATGGATTCAAAAGACAGTGTCTACT...AGAACACATATTAGATGACTTAGTTCCCTGTTGCGGTACTGTCAGTTTACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CAA 72 bp CTGGGAAGCAACTCGGTTTCCTTGGCCTCGCGGGACTaGCGGGGCTCACGGGTGTGGCGGAGCTGGCGGGGT +
Preference number: 6 (lower is better)
Translates to: LGSNSVSLASRD*RGSRVWRSWRG
Trigger: ACCCCGCCAGCTCCGCCACACCCGTGAGCCCCGCAAGTCCCGCGAGGCCAAGGAAACCGAGTTGCTTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CAA 90 bp GAGGGGGAGATCATTACTGCGGCGCTGGGAAGCAACTCGGTTTCCTaGGCCTCGCGGGACTTGCGGGGCTCACGGGTGTGGCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: EGEIITAALGSNSVS*ASRDLRGSRVWRSW
Trigger: CCAGCTCCGCCACACCCGTGAGCCCCGCAAGTCCCGCGAGGCCAAGGAAACCGAGTTGCTTCCCAGCGCCGCAGTAATGATCTCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS GCA 72 bp CGGGGCTCTGGTGATCAGAGAGGGGGAGATCATTACTaGGGCGCTGGGAAGCAACTCGGTTTCCTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: RGSGDQRGGDHY*GAGKQLGFLGL
Trigger: GAGGCCAAGGAAACCGAGTTGCTTCCCAGCGCCGCAGTAATGATCTCCCCCTCTCTGATCACCAGAGCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS GCA 72 bp GGCTCATCACATTCCTCGGACTCGTCTCTCTGGTCTTaGTCCCTGACCTCCTCGGGTTCCTCGGGATTCTCG +
Preference number: 6 (lower is better)
Translates to: GSSHSSDSSLWS*SLTSSGSSGFS
Trigger: CGAGAATCCCGAGGAACCCGAGGAGGTCAGGGAGCAAGACCAGAGAGACGAGTCCGAGGAATGTGATGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CAA 72 bp AGGCTCATCACATTCCTCGGACTCGTCTCTCTGGTCTaGCTCCCTGACCTCCTCGGGTTCCTCGGGATTCTC +
Preference number: 6 (lower is better)
Translates to: RLITFLGLVSLV*LPDLLGFLGIL
Trigger: GAGAATCCCGAGGAACCCGAGGAGGTCAGGGAGCAAGACCAGAGAGACGAGTCCGAGGAATGTGATGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CAA 90 bp GGACTCATGAGGCTCATCACATTCCTCGGACTCGTCTCTCTGGTCTaGCTCCCTGACCTCCTCGGGTTCCTCGGGATTCTCGTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: GLMRLITFLGLVSLV*LPDLLGFLGILVFL
Trigger: GAGAAACACGAGAATCCCGAGGAACCCGAGGAGGTCAGGGAGCAAGACCAGAGAGACGAGTCCGAGGAATGTGATGAGCCTCATGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CCA 72 bp GTCACCTCGGACGGCGCAGATGAACTTAGAAACTCTTaGTTCTCCATTCGCGCCAGAAGCTTCTGTCGCGCG +
Preference number: 6 (lower is better)
Translates to: VTSDGADELRNS*FSIRARSFCRA
Trigger: CGCGCGACAGAAGCTTCTGGCGCGAATGGAGAACCAAGAGTTTCTAAGTTCATCTGCGCCGTCCGAGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CAA 72 bp GCTTCTGGAAGACTTCGGAGCAAGTGGATATTTCTGTaGAGACCTGCCCATCGGTCACCTCGGACGGCGCAG +
Preference number: 6 (lower is better)
Translates to: ASGRLRSKWIFL*RPAHRSPRTAQ
Trigger: CTGCGCCGTCCGAGGTGACCGATGGGCAGGTCTCAACAGAAATATCCACTTGCTCCGAAGTCTTCCAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS TCA 72 bp CTTCTGGAAGACTTCGGAGCAAGTGGATATTTCTGTTaGGACCTGCCCATCGGTCACCTCGGACGGCGCAGA +
Preference number: 6 (lower is better)
Translates to: LLEDFGASGYFC*DLPIGHLGRRR
Trigger: TCTGCGCCGTCCGAGGTGACCGATGGGCAGGTCTCAACAGAAATATCCACTTGCTCCGAAGTCTTCCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS TCA 72 bp TGTTTCTCGGGATCCTCGGACTCCTCAAGCTCTCTGTaGGTGTCGAGAATCCTGAGCACAATGGGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: CFSGSSDSSSSL*VSRILSTMGFW
Trigger: CCAGAAGCCCATTGTGCTCAGGATTCTCGACACTCACAGAGAGCTTGAGGAGTCCGAGGATCCCGAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CAA 90 bp GCACAATGGGCTTCTGGAAGACTTCGGAGCAAGTGGATATTTCTGTaGAGACCTGCCCATCGGTCACCTCGGACGGCGCAGATGAACTTA +
Preference number: 6 (lower is better)
Translates to: AQWASGRLRSKWIFL*RPAHRSPRTAQMNL
Trigger: TAAGTTCATCTGCGCCGTCCGAGGTGACCGATGGGCAGGTCTCAACAGAAATATCCACTTGCTCCGAAGTCTTCCAGAAGCCCATTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS TCA 72 bp TTGGGCTGGGCAAGGTTCTCAAGTCTTTTGGTCAGCTaGGCCTTCAAAGCACCCTGGGAAACAGGGCGAATA +
Preference number: 6 (lower is better)
Translates to: LGWARFSSLLVS*AFKAPWETGRI
Trigger: TATTCGCCCTGTTTCCCAGGGTGCTTTGAAGGCTCAGCTGACCAAAAGACTTGAGAACCTTGCCCAGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS GCA 72 bp AAGACTTCGGAGCAAGTGGATATTTCTGTTGAGACCTaGCCATCGGTCACCTCGGACGGCGCAGATGAACTT +
Preference number: 6 (lower is better)
Translates to: KTSEQVDISVET*PSVTSDGADEL
Trigger: AAGTTCATCTGCGCCGTCCGAGGTGACCGATGGGCAGGTCTCAACAGAAATATCCACTTGCTCCGAAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CCA 72 bp AAACTTCCTTGGGCTGGGCAAGGTTCTCAAGTCTTTTaGTCAGCTGAGCCTTCAAAGCACCCTGGGAAACAG +
Preference number: 6 (lower is better)
Translates to: KLPWAGQGSQVF*SAEPSKHPGKQ
Trigger: CTGTTTCCCAGGGTGCTTTGAAGGCTCAGCTGACCAAAAGACTTGAGAACCTTGCCCAGCCCAAGGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS CAA 72 bp TTGAATCCATTGGGCTGTGACAGCCTCTGGATCCTTTaGGAGGGTTGTCTAAACAATGCAGGAGGAGTGATC +
Preference number: 6 (lower is better)
Translates to: LNPLGCDSLWIL*EGCLNNAGGVI
Trigger: GATCACTCCTCCTGCATTGTTTAGACAACCCTCCAAAAGGATCCAGAGGCTGTCACAGCCCAATGGATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS CAA 90 bp CACTGTCTTTTGAATCCATTGGGCTGTGACAGCCTCTGGATCCTTTaGGAGGGTTGTCTAAACAATGCAGGAGGAGTGATCTCCCAAATT +
Preference number: 6 (lower is better)
Translates to: HCLLNPLGCDSLWIL*EGCLNNAGGVISQI
Trigger: AATTTGGGAGATCACTCCTCCTGCATTGTTTAGACAACCCTCCAAAAGGATCCAGAGGCTGTCACAGCCCAATGGATTCAAAAGACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS GCA 72 bp CAGCCTCTGGATCCTTTTGGAGGGTTGTCTAAACAATaGAGGAGGAGTGATCTCCCAAATTACAGACTCTCT +
Preference number: 6 (lower is better)
Translates to: QPLDPFGGLSKQ*RRSDLPNYRLS
Trigger: AGAGAGTCTGTAATTTGGGAGATCACTCCTCCTGCATTGTTTAGACAACCCTCCAAAAGGATCCAGAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS CCA 72 bp CACTGTCTTTTGAATCCATTGGGCTGTGACAGCCTCTaGATCCTTTTGGAGGGTTGTCTAAACAATGCAGGA +
Preference number: 6 (lower is better)
Translates to: HCLLNPLGCDSL*ILLEGCLNNAG
Trigger: TCCTGCATTGTTTAGACAACCCTCCAAAAGGATCCAGAGGCTGTCACAGCCCAATGGATTCAAAAGACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS CAA 72 bp AAGGGTCTATTTAGTAGACACTGTCTTTTGAATCCATaGGGCTGTGACAGCCTCTGGATCCTTTTGGAGGGT +
Preference number: 6 (lower is better)
Translates to: KGLFSRHCLLNP*GCDSLWILLEG
Trigger: ACCCTCCAAAAGGATCCAGAGGCTGTCACAGCCCAATGGATTCAAAAGACAGTGTCTACTAAATAGACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS CAA 90 bp TTATCACTGAAGGGTCTATTTAGTAGACACTGTCTTTTGAATCCATaGGGCTGTGACAGCCTCTGGATCCTTTTGGAGGGTTGTCTAAAC +
Preference number: 6 (lower is better)
Translates to: LSLKGLFSRHCLLNP*GCDSLWILLEGCLN
Trigger: GTTTAGACAACCCTCCAAAAGGATCCAGAGGCTGTCACAGCCCAATGGATTCAAAAGACAGTGTCTACTAAATAGACCCTTCAGTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS CAA 72 bp TTATCACTGAAGGGTCTATTTAGTAGACACTGTCTTTaGAATCCATTGGGCTGTGACAGCCTCTGGATCCTT +
Preference number: 6 (lower is better)
Translates to: LSLKGLFSRHCL*NPLGCDSLWIL
Trigger: AAGGATCCAGAGGCTGTCACAGCCCAATGGATTCAAAAGACAGTGTCTACTAAATAGACCCTTCAGTGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510716.1
ENST00000512175.3
CDS TCA 72 bp TGTTGTGGCTTTCTGTATTTAACGTGTAAGAGGTTGTaGCAACTCCCAGATCCTTTGAGAACACTGTGCTTT +
Preference number: 6 (lower is better)
Translates to: CCGFLYLTCKRL*QLPDPLRTLCF
Trigger: AAAGCACAGTGTTCTCAAAGGATCTGGGAGTTGTCACAACCTCTTACACGTTAAATACAGAAAGCCACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512175.3
CDS CCA 72 bp CCAGATCCTTTGAGAACACTGTGCTTTCAAAGCAGCTaGCTTGGTTTTAAAGACATCTGGATCATAATACAC +
Preference number: 6 (lower is better)
Translates to: PDPLRTLCFQSS*LGFKDIWIIIH
Trigger: GTGTATTATGATCCAGATGTCTTTAAAACCAAGCCAGCTGCTTTGAAAGCACAGTGTTCTCAAAGGATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512175.3