RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THBS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137801

Ensembl transcript IDs: ENST00000260356.6, ENST00000397591.2, ENST00000466755.1, ENST00000484734.1, ENST00000490247.1, ENST00000497720.1, ENST00000559746.1, ENST00000560894.1

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCTTCATACAATCGTCTCGGGTATGCGCCCTCCCCTTAGTGCTTTaGCCTCTGCTCCCCGTGTTCCTGAAGGAGGATGTCAGGGTGGTT +
Preference number: 1 (lower is better)
Translates to: FFIQSSRVCALPLVL*PLLPVFLKEDVRVV
Trigger: AACCACCCTGACATCCTCCTTCAGGAACACGGGGAGCAGAGGCCAAAGCACTAAGGGGAGGGCGCATACCCGAGACGATTGTATGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 90 bp GTCTCCACAACATGCAATCGTGTTGCCCACCCAAGGCATCATTCGTaGGTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTT +
Preference number: 1 (lower is better)
Translates to: VSTTCNRVAHPRHHS*VRKCRCESCVCFSV
Trigger: AACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGACCCACGAATGATGCCTTGGGTGGGCAACACGATTGCATGTTGTGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR GCA 90 bp AGCTCCTCCCTCATCCACATTTACTTCCGAAGTGTCTCCACAACATaGAATCGTGTTGCCCACCCAAGGCATCATTCGTGGGTCAGAAAA +
Preference number: 1 (lower is better)
Translates to: SSSLIHIYFRSVSTT*NRVAHPRHHSWVRK
Trigger: TTTTCTGACCCACGAATGATGCCTTGGGTGGGCAACACGATTGCATGTTGTGGAGACACTTCGGAAGTAAATGTGGATGAGGGAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 90 bp TTCTCTGACATGCCTGAAAATGCTTTTGAGTCCACTGCTCAGAGATaGCCTCACAATAGCACCCTGCTCTGTGACAAAGGCAGAGTGGAA +
Preference number: 1 (lower is better)
Translates to: FSDMPENAFESTAQR*PHNSTLLCDKGRVE
Trigger: TTCCACTCTGCCTTTGTCACAGAGCAGGGTGCTATTGTGAGGCCATCTCTGAGCAGTGGACTCAAAAGCATTTTCAGGCATGTCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 90 bp CAATTTCAATGTGACCAGGCAATGGCAGCCAGCACTGCCTTACACTaGTTTGATTCTGATTCCCTAATTCTGGCCACTGCAGGTGATGAG +
Preference number: 1 (lower is better)
Translates to: QFQCDQAMAASTALH*FDSDSLILATAGDE
Trigger: CTCATCACCTGCAGTGGCCAGAATTAGGGAATCAGAATCAAACCAGTGTAAGGCAGTGCTGGCTGCCATTGCCTGGTCACATTGAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR GCA 90 bp AGTCCAGAAGCCAGTCTTTGTCTCCCTTTCCTGCTTCTATTTAAGTaGCTATTTACATGGGTTAATCAGCTAACGCCAGTCAGCATCATG +
Preference number: 1 (lower is better)
Translates to: SPEASLCLPFLLLFK*LFTWVNQLTPVSIM
Trigger: CATGATGCTGACTGGCGTTAGCTGATTAACCCATGTAAATAGGCACTTAAATAGAAGCAGGAAAGGGAGACAAAGACTGGCTTCTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR TCA 90 bp CATAACATCCACTCTGAGCACAAGGGGCAGAGCAGCTTATTAGACTaGTTTTCCTTGTGCTGTTCTTGCAAGAGATTTGCTGATAAATGT +
Preference number: 1 (lower is better)
Translates to: HNIHSEHKGQSSLLD*FSLCCSCKRFADKC
Trigger: ACATTTATCAGCAAATCTCTTGCAAGAACAGCACAAGGAAAATCAGTCTAATAAGCTGCTCTGCCCCTTGTGCTCAGAGTGGATGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 90 bp CCTGATTATTTGAAGGTCAGTCTTAGGGTGAAACTGGAACATGCCTaGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTATCTT +
Preference number: 1 (lower is better)
Translates to: PDYLKVSLRVKLEHA*KKSSSFQSLFLSYL
Trigger: AAGATAAGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTTCACCCTAAGACTGACCTTCAAATAATCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 90 bp TTTCTTCATACAATCGTCTCGGGTATGCGCCCTCCCCTTAGTGCTTaGGCCTCTGCTCCCCGTGTTCCTGAAGGAGGATGTCAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: FLHTIVSGMRPPLSA*ASAPRVPEGGCQGG
Trigger: ACCACCCTGACATCCTCCTTCAGGAACACGGGGAGCAGAGGCCAAAGCACTAAGGGGAGGGCGCATACCCGAGACGATTGTATGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATCTCCCCTTAGTGCTTTaGCCTCTGCTCCCCGTGTTC +
Preference number: 2 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHLPLVL*PLLPVF
Trigger: GAACACGGGGAGCAGAGGCCAAAGCACTAAGGGGAG...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGTGCTCCCCGTGTTCCTaGAGGAGGATGTCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQCSPCS*RRMSGW
Trigger: CCACCCTGACATCCTCCTTCAGGAACACGGGGAGCA...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 90 bp TCATCCACATTTACTTCCGAAGTGTCTCCACAACATGCAATCGTGTaGCCCACCCAAGGCATCATTCGTGGGTCAGAAAATGTCGCTGTG +
Preference number: 2 (lower is better)
Translates to: SSTFTSEVSPQHAIV*PTQGIIRGSENVAV
Trigger: CACAGCGACATTTTCTGACCCACGAATGATGCCTTGGGTGGGCAACACGATTGCATGTTGTGGAGACACTTCGGAAGTAAATGTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR GCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTAAATATAAGCACGGCTaGCCCTCCTTTGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVKYKHG*PSFGRQ
Trigger: CTGCCTCCCAAAGGAGGGGCAGCCGTGCTTATATTT...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTGTGACAAAGGCAGAGTaGAATGGGCACCTTCCCAAC +
Preference number: 2 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPVTKAE*NGHLPN
Trigger: GTTGGGAAGGTGCCCATTCCACTCTGCCTTTGTCAC...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGTCCACTGCTCAGAGATaGCCTCACAATAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQSTAQR*PHNSTL
Trigger: CAGGGTGCTATTGTGAGGCCATCTCTGAGCAGTGGA...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGGAAGCCAAGGAGAAGTaGTCCTGGGGGTTTTCTCAA +
Preference number: 2 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQEAKEK*SWGFSQ
Trigger: TTGAGAAAACCCCCAGGATCACTTCTCCTTGGCTTC...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR GCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTTCTCCCTGGAAATATaGACAAGGGATGGGGTAAAA +
Preference number: 2 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHFSLEI*TRDGVK
Trigger: TTTTACCCCATCCCTTGTGCATATTTCCAGGGAGAA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATAGCACTGCCTTACACTaGTTTGATTCTGATTCCCTA +
Preference number: 2 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHSTALH*FDSDSL
Trigger: TAGGGAATCAGAATCAAACCAGTGTAAGGCAGTGCT...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR GCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGAACATGCAATCGTGTTaGCCACCCAAGGCATCATTC +
Preference number: 2 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQNMQSC*PPKASF
Trigger: GAATGATGCCTTGGGTGGGCAACACGATTGCATGTT...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 90 bp TTATTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATaGCAAGGACAGCTCCTCCCTCATCCACATTTACTTCCGAAGTGT +
Preference number: 2 (lower is better)
Translates to: LFLLQEEVSVMLGST*QGQLLPHPHLLPKC
Trigger: ACACTTCGGAAGTAAATGTGGATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR GCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTCAATCGTCTCGGGTATaGGCCCTCCCCTTAGTGCTT +
Preference number: 2 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGQSSRV*ALPLVL
Trigger: AAGCACTAAGGGGAGGGCGCATACCCGAGACGATTG...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTCCAAGGCATCATTCGTaGGTCAGAAAATGTCGCTGT +
Preference number: 2 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSPRHHS*VRKCRC
Trigger: ACAGCGACATTTTCTGACCCACGAATGATGCCTTGG...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTAAAACTGCATTTTCTTaGGGCAGGTCGCACGTTCTA +
Preference number: 2 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSKTAFS*GRSHVL
Trigger: TAGAACGTGCGACCTGCCTCAAGAAAATGCAGTTTT...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR GCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTCTCACAATAGCACCCTaGTCTGTGACAAAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLLTIAP*SVTKAE
Trigger: CTCTGCCTTTGTCACAGAGCAGGGTGCTATTGTGAG...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTCAGAAAATGTCGCTGTaGGAGTTGCGTGTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIQKMSL*ELRVLQ
Trigger: CTGAAGCACACGCAACTCTCACAGCGACATTTTCTG...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR GCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTCTCCCTTCTCTGACATaGCTGAAAATGCTTTTGAGT +
Preference number: 2 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSLPSLT*LKMLLS
Trigger: ACTCAAAAGCATTTTCAGGCATGTCAGAGAAGGGAG...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR GCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTGTGAGAGTTGCGTGTaGTTCAGTGTTTTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSCESCV*FSVFPF
Trigger: AAAGGGAAAAACACTGAAGCACACGCAACTCTCACA...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTCGCCAGTCAGCATCATaGAATCCAGCAATAGTCTTT +
Preference number: 2 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLRQSAS*NPAIVF
Trigger: AAAGACTATTGCTGGATTTCATGATGCTGACTGGCG...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGTGCTATGTACAACACTaGCTTTTTAGGTACTACAGT +
Preference number: 2 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQCYVQH*LFRYYS
Trigger: ACTGTAGTACCTAAAAAGTCAGTGTTGTACATAGCA...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 90 bp GCACCACCTTTATTGTATGTACATTCTTATAAGACCTGGAGTTTATaGCTCTTCACTCGAGCTCTCCCACAACACATGACAATAAACTGT +
Preference number: 2 (lower is better)
Translates to: APPLLYVHSYKTWSL*LFTRALPQHMTINC
Trigger: ACAGTTTATTGTCATGTGTTGTGGGAGAGCTCGAGTGAAGAGCAATAAACTCCAGGTCTTATAAGAATGTACATACAATAAAGGTGGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTCTAGGAGTCCACACTaGTGCAAGCACAGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: QGLLIGTLGPFLHMIICISRSPH*CKHRKE
Trigger: TTCTTTTCTGTGCTTGCATCAGTGTGGACTCCTAGA...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTTCTTATGGGGGCCCTTaGCTTAGGGATAATTTCTCT +
Preference number: 2 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGSYGGP*LRDNFS
Trigger: AGAGAAATTATCCCTAAGTCAAGGGCCCCCATAAGA...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGTCAACAAAGATGACATaGATAGTCTTTACGCTTCTT +
Preference number: 2 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQSTKMT*IVFTLL
Trigger: AAGAAGCGTAAAGACTATCCATGTCATCTTTGTTGA...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTTTATTCATTGGAGGCTaGATGCTGAGTCTGTTTTTG +
Preference number: 2 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLLFIGG*MLSLFL
Trigger: CAAAAACAGACTCAGCATTCAGCCTCCAATGAATAA...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTCAAACACTTTCCGTATaGAGCCTAAATTTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGQTLSV*SLNFQA
Trigger: TGCCTGGAAATTTAGGCTTCATACGGAAAGTGTTTG...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTGGGGTAAAACAGTATTaGAGACCTCATGGCTTTCTT +
Preference number: 2 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIGVKQY*RPHGFL
Trigger: AAGAAAGCCATGAGGTCTTCAATACTGTTTTACCCC...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR GCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTCATAGTTCCAGAAGGTaGAATACCAGCATTGGTTTA +
Preference number: 2 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLHSSRR*NTSIGL
Trigger: TAAACCAATGCTGGTATTGCACCTTCTGGAACTATG...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTATCTGTAATGCTTaGCTCAACATTGCAAGGACA +
Preference number: 2 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIGICNA*LNIART
Trigger: TGTCCTTGCAATGTTGAGCCAAGCATTACAGATACC...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTAGGAGGATGTCAGGGTaGTTTTGTTTGCTAATTCTA +
Preference number: 2 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIRRMSG*FCLLIL
Trigger: TAGAATTAGCAAACAAAACCACCCTGACATCCTCCT...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTAAGTGCCTATTTACATaGGTTAATCAGCTAACGCCA +
Preference number: 2 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIKCLFT*VNQLTP
Trigger: TGGCGTTAGCTGATTAACCCATGTAAATAGGCACTT...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTCATATCTACACAATCTaGGATATCTATTCCAATGGC +
Preference number: 2 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGHIYTI*DIYSNG
Trigger: GCCATTGGAATAGATATCTCAGATTGTGTAGATATG...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR GCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTTCCTTGTGCTGTTCTTaGAAGAGATTTGCTGATAAA +
Preference number: 2 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGSLCCS*KRFADK
Trigger: TTTATCAGCAAATCTCTTGCAAGAACAGCACAAGGA...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGTGCAATACCAGCATTaGTTTATGATCAGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIVQYQH*FMISLS
Trigger: TGAAAGACTGATCATAAACCAATGCTGGTATTGCAC...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTAGATGTCTTATTCATTaGAGGCTGAATGCTGAGTCT +
Preference number: 2 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFRCLIH*RLNAES
Trigger: AGACTCAGCATTCAGCCTCCAATGAATAAGACATCT...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTAATATGCACAAGGGATaGGGTAAAACAGTATTGAAG +
Preference number: 2 (lower is better)
Translates to: QGLLIGTLGPFLHMIICINMHKG*GKTVLK
Trigger: CTTCAATACTGTTTTACCCCATCCCTTGTGCATATT...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 90 bp AGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTaGTATTTAGACACACACGCATTTATGGATTCCTTCCAAATTTTA +
Preference number: 2 (lower is better)
Translates to: RSAYWYTWAFSSHDN*YLDTHAFMDSFQIL
Trigger: TAAAATTTGGAAGGAATCCATAAATGCGTGTGTGTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR TCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACAAGCTACATCTAGAATaGAGCCACCAATTTCAATGT +
Preference number: 2 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDKLHLE*SHQFQC
Trigger: ACATTGAAATTGGTGGCTTCATTCTAGATGTAGCTT...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 72 bp CAATCGTCTCGGGTATGCGCCCTCCCCTTAGTGCTTTaGCCTCTGCTCCCCGTGTTCCTGAAGGAGGATGTC +
Preference number: 3 (lower is better)
Translates to: QSSRVCALPLVL*PLLPVFLKEDV
Trigger: GACATCCTCCTTCAGGAACACGGGGAGCAGAGGCCAAAGCACTAAGGGGAGGGCGCATACCCGAGACGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR GCA 72 bp TTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATaGGCCCTCCCCTTAGTGCTTTGGCCTCTGCTCCCC +
Preference number: 3 (lower is better)
Translates to: FLHIFFIQSSRV*ALPLVLWPLLP
Trigger: GGGGAGCAGAGGCCAAAGCACTAAGGGGAGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 72 bp ACATGCAATCGTGTTGCCCACCCAAGGCATCATTCGTaGGTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGC +
Preference number: 3 (lower is better)
Translates to: TCNRVAHPRHHS*VRKCRCESCVC
Trigger: GCACACGCAACTCTCACAGCGACATTTTCTGACCCACGAATGATGCCTTGGGTGGGCAACACGATTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 72 bp TGTGACCAGGCAATGGCAGCCAGCACTGCCTTACACTaGTTTGATTCTGATTCCCTAATTCTGGCCACTGCA +
Preference number: 3 (lower is better)
Translates to: CDQAMAASTALH*FDSDSLILATA
Trigger: TGCAGTGGCCAGAATTAGGGAATCAGAATCAAACCAGTGTAAGGCAGTGCTGGCTGCCATTGCCTGGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR TCA 72 bp TTCTTGAGGCAGGTCGCACGTTCTAGGAGTCCACACTaGTGCAAGCACAGAAAAGAAGGAAGCCAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: FLRQVARSRSPH*CKHRKEGSQGE
Trigger: TTCTCCTTGGCTTCCTTCTTTTCTGTGCTTGCATCAGTGTGGACTCCTAGAACGTGCGACCTGCCTCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR GCA 72 bp CTCATCCACATTTACTTCCGAAGTGTCTCCACAACATaGAATCGTGTTGCCCACCCAAGGCATCATTCGTGG +
Preference number: 3 (lower is better)
Translates to: LIHIYFRSVSTT*NRVAHPRHHSW
Trigger: CCACGAATGATGCCTTGGGTGGGCAACACGATTGCATGTTGTGGAGACACTTCGGAAGTAAATGTGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CAA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTACGGCTGCCCCTCCTTaGGGAGGCAGCTGGTGCTCA +
Preference number: 3 (lower is better)
Translates to: QGLLIGTLGPFLHMIICITAAPP*GGSWCS
Trigger: TGAGCACCAGCTGCCTCCCAAAGGAGGGGCAGCCGT...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR TCA 72 bp CAAGCTACATCTAGAATGAAGCCACCAATTTCAATGTaGCCAGGCAATGGCAGCCAGCACTGCCTTACACTG +
Preference number: 3 (lower is better)
Translates to: QATSRMKPPISM*PGNGSQHCLTL
Trigger: CAGTGTAAGGCAGTGCTGGCTGCCATTGCCTGGTCACATTGAAATTGGTGGCTTCATTCTAGATGTAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR TCA 72 bp CCCAAGGCATCATTCGTGGGTCAGAAAATGTCGCTGTaGGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGT +
Preference number: 3 (lower is better)
Translates to: PKASFVGQKMSL*ELRVLQCFSLC
Trigger: ACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGACCCACGAATGATGCCTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR GCA 72 bp TTACTTCCGAAGTGTCTCCACAACATGCAATCGTGTTaGCCACCCAAGGCATCATTCGTGGGTCAGAAAATG +
Preference number: 3 (lower is better)
Translates to: LLPKCLHNMQSC*PPKASFVGQKM
Trigger: CATTTTCTGACCCACGAATGATGCCTTGGGTGGGCAACACGATTGCATGTTGTGGAGACACTTCGGAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CAA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTGAAAACTGCATTTTCTaGAGGCAGGTCGCACGTTCT +
Preference number: 3 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPENCIF*RQVARS
Trigger: AGAACGTGCGACCTGCCTCAAGAAAATGCAGTTTTC...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CAA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCCTCCCCTTAGTGCTTaGGCCTCTGCTCCCCGTGTT +
Preference number: 3 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFPPLSA*ASAPRV
Trigger: AACACGGGGAGCAGAGGCCAAAGCACTAAGGGGAGG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR TCA 72 bp CACTCTGAGCACAAGGGGCAGAGCAGCTTATTAGACTaGTTTTCCTTGTGCTGTTCTTGCAAGAGATTTGCT +
Preference number: 3 (lower is better)
Translates to: HSEHKGQSSLLD*FSLCCSCKRFA
Trigger: AGCAAATCTCTTGCAAGAACAGCACAAGGAAAATCAGTCTAATAAGCTGCTCTGCCCCTTGTGCTCAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 72 bp ATTATTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTaGCTCAACATTGCAAGGACAGCTCCTCCCTCATCC +
Preference number: 3 (lower is better)
Translates to: IIPSSRGGICNA*LNIARTAPPSS
Trigger: GGATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATGTTCTTGCAAGAGATTaGCTGATAAATGTCAACTAC +
Preference number: 3 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHVLARD*LINVNY
Trigger: GTAGTTGACATTTATCAGCAAATCTCTTGCAAGAAC...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 72 bp TTGAAGGTCAGTCTTAGGGTGAAACTGGAACATGCCTaGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTG +
Preference number: 3 (lower is better)
Translates to: LKVSLRVKLEHA*KKSSSFQSLFL
Trigger: CAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTTCACCCTAAGACTGACCTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CAA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTTGGGGTAAAACAGTATaGAAGACCTCATGGCTTTCT +
Preference number: 3 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVWGKTV*KTSWLS
Trigger: AGAAAGCCATGAGGTCTTCAATACTGTTTTACCCCA...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CAA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACTGCCTGAAAATGCTTTaGAGTCCACTGCTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDCLKML*SPLLRD
Trigger: ATCTCTGAGCAGTGGACTCAAAAGCATTTTCAGGCA...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CAA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTGATGTCAGGGTGGTTTaGTTTGCTAATTCTAGTGAG +
Preference number: 3 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGDVRVV*FANSSE
Trigger: CTCACTAGAATTAGCAAACAAAACCACCCTGACATC...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CCA 72 bp CCCATCCAAAAATCAAGGTCTGCTTATTGGTACACTTaGGCCTTTTCTTCACATGATAATTTGTATTTAGAC +
Preference number: 3 (lower is better)
Translates to: PIQKSRSAYWYT*AFSSHDNLYLD
Trigger: GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTGATTTTTGGATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CAA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTATAAATGTCAACTACTaGCTCTCAAACACTTTCCGT +
Preference number: 3 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIINVNY*LSNTFR
Trigger: ACGGAAAGTGTTTGAGAGCAAGTAGTTGACATTTAT...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR-3UTR CAA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTAATGCTATTTCCTTATaGGGAATACTTCTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: GQYSTFIISPSKNQGLLINAISL*GILLCR
Trigger: TCTGCAGAGAAGTATTCCCAATAAGGAAATAGCATT...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 72 bp ACAATCGTCTCGGGTATGCGCCCTCCCCTTAGTGCTTaGGCCTCTGCTCCCCGTGTTCCTGAAGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: TIVSGMRPPLSA*ASAPRVPEGGC
Trigger: ACATCCTCCTTCAGGAACACGGGGAGCAGAGGCCAAAGCACTAAGGGGAGGGCGCATACCCGAGACGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATGACCCCAGCCTCCATTaGTGGGGCAGGCGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHDPSLH*WGRRLS
Trigger: AGAAAGACGCCTGCCCCATCAATGGAGGCTGGGGTC...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTGCTCCCCGTGTTCCTaGAGGAGGATGTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHCSPCS*RRMSGW
Trigger: CCACCCTGACATCCTCCTTCAGGAACACGGGGAGCA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTAGGGCGTTCCGCAGGTaGTCGCCAGGCCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVRAFRR*SPGPVV
Trigger: CACCACAGGGCCTGGCGAGCACCTGCGGAACGCCCT...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATCATTGGACACCACGCTaGAGACCTGGCCAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHHWTPR*RPGQSG
Trigger: ACCACTCTGGCCAGGTCTTCAGCGTGGTGTCCAATG...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTGGCCAGGTCTCTGGTaGAGACGCTTTGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHWPGLW*RRFGWG
Trigger: TCCCCATCCAAAGCGTCTTCACCAGAGACCTGGCCA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATGGTTGGCATCCTCGATaGGGAAAGCTGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHGWHPR*GKLGWK
Trigger: CTTCCAGCCCAGCTTTCCGCATCGAGGATGCCAACC...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTGGTCATGCCACAGGGTaGGCACCTGGCCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPGHATG*APGQGC
Trigger: ACACCCCTGGCCAGGTGCGCACCCTGTGGCATGACC...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATGTCTCCGCCAGACTCTaGAATGCGGTTGGTGCCACA +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHVSARL*NAVGAT
Trigger: TGTGGCACCAACCGCATTCCAGAGTCTGGCGGAGAC...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATATAGTCTTCCTGCCCTaGGTTGGGAAGGTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHIVFLP*VGKVGA
Trigger: TGCCCCAACCTTCCCAACTCAGGGCAGGAAGACTAT...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTAGGCCAGCCCCATGGTaGAGCTGTTGGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPRPAPW*SCWCPA
Trigger: TGCTGGGCACCAACAGCTCCACCATGGGGCTGGCCT...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTGCATGTTCGACACCCTaGCCGAAGGGCTGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPACSTP*PKGCEP
Trigger: CGGCTCACAGCCCTTCGGCCAGGGTGTCGAACATGC...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTCCTCACATCGGTTGTTaGGGCTATCGCAGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVPHIGC*GYRRSG
Trigger: GCCGCTCCTGCGATAGCCTCAACAACCGATGTGAGG...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATATCTCCAATGCGGTCTaGGTCAGAGTCCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHISNAV*VRVQLI
Trigger: GATCAGCTGGACTCTGACTCAGACCGCATTGGAGAT...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCCATGGTGGAGCTGTTaGTGCCCAGCAGGGATCCTG +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQPWWSC*CPAGIL
Trigger: CAGGATCCCTGCTGGGCACCAACAGCTCCACCATGG...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGAAGACCTGGCCAGAGTaGTCTTTCCGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQKTWPE*SFRSRA
Trigger: GGCCCTGGAGCGGAAAGACCACTCTGGCCAGGTCTT...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTTCTGCAGCACCCCCTaGAAATTGTCATTGACGCCC +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHFCSTP*KLSLTP
Trigger: GGGCGTCAATGACAATTTCCAGGGGGTGCTGCAGAA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTATCCCTGAGCCCTCGTaGGGTTGGTGTCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPIPEPS*GWCPSR
Trigger: CCTACTGGGACACCAACCCCACGAGGGCTCAGGGAT...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATAATGAAACCCGTCTTTaGCCTGTGGCTGAGACGCCA +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHNETRL*PVAETP
Trigger: TGGCGTCTCAGCCACAGGCCAAAGACGGGTTTCATT...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACCTGGCCGAAGGGCTGTaGGCCGGTGAAGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDLAEGL*AGEAWG
Trigger: CCCCCACGCTTCACCGGCTCACAGCCCTTCGGCCAG...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTCTTTGGCCTGTGGCTaGGACGCCATCTGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSSLACG*DAICRR
Trigger: CCGCCTACAGATGGCGTCTCAGCCACAGGCCAAAGA...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGTGGTGGAGCTGTTGGTaGCCAGCAGGGATCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQWWSCW*PAGILC
Trigger: ACACAGGATCCCTGCTGGGCACCAACAGCTCCACCA...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTCTTCCACTGGCCGGTTaGCAGGAGAGCTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVLPLAG*QESFFH
Trigger: GTGGAAGAAGCTCTCCTGGCAACCGGCCAGTGGAAG...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATCTCACAATAGCACCCTaGTCTGTGACAAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHLTIAP*SVTKAE
Trigger: CTCTGCCTTTGTCACAGAGCAGGGTGCTATTGTGAG...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGGGCAGGAGGGAGAATTaGTTGAACCGGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQGRREN*LNRGGR
Trigger: TCTGCCTCCCCGGTTCAAGCAATTCTCCCTCCTGCC...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGGTGATGCTCTTCCACTaGCCGGTTGCCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQVMLFH*PVARRA
Trigger: AGCTCTCCTGGCAACCGGCCAGTGGAAGAGCATCAC...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTGGCAGGTCCGTGTCTaGACCGAGGAGCCCTCACAT +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSWQVRV*TEEPSH
Trigger: ATGTGAGGGCTCCTCGGTCCAGACACGGACCTGCCA...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCCTGTTTGTTGGCCGTaGCATGTTCGACACCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQPVCWP*HVRHPG
Trigger: GCCAGGGTGTCGAACATGCCACGGCCAACAAACAGG...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTCCAGAGGAATCATCTaGAATCGGCGGAAATCGGTC +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHSRGII*NRRKSV
Trigger: GACCGATTTCCGCCGATTCCAGATGATTCCTCTGGA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACGAGCGACAGGAGCCCTaGACTCGCAGGCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDERQEP*TRRPAR
Trigger: CCGAGCTGGCCTGCGAGTTCAGGGCTCCTGTCGCTC...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTGCGGGCGGCCCCGGTaGGTTCAAAGATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSCGRPR*VQRCQT
Trigger: TGTTTGACATCTTTGAACTCACCGGGGCCGCCCGCA...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCTTGGACGGTCAGGCTaGGGTCCAGGGTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFLGRSG*GPGCPP
Trigger: AGGCGGGCACCCTGGACCTCAGCCTGACCGTCCAAG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTTGGTGCGCAGGCCCCTaGGTTCCAGGACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGWCAGP*VPGPCW
Trigger: CCAGCATGGTCCTGGAACTCAGGGGCCTGCGCACCA...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTTGTCACAGAACAAGATaGCCACGGGGACCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPCHRTR*PRGPVA
Trigger: AGCCACTGGTCCCCGTGGTCATCTTGTTCTGTGACA...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTAGGCCCGAGTATCCCTaGGCCCTCGTGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIRPEYP*ALVGLV
Trigger: CACCAACCCCACGAGGGCTCAGGGATACTCGGGCCT...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTGAGGGGCGCGGGGAATaGCTGTGCGTCCGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIEGRGE*LCVRSR
Trigger: TCTACTCCGGACGCACAGGCATTCCCCGCGCCCCTC...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGTCCACAGACACCACGTaGTGCTTTCCTTGGACGGTC +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQSTDTT*CFPWTV
Trigger: GACCGTCCAAGGAAAGCAGCACGTGGTGTCTGTGGA...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTTGGGCCCTGTCTTCCTaGACAAACAGGGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPWALSS*TNRVML
Trigger: GAGCATCACCCTGTTTGTGCAGGAAGACAGGGCCCA...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATACAAACCTCACATTCTaGAGCACCCCCTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHTNLTF*STPWKL
Trigger: CAATTTCCAGGGGGTGCTGCAGAATGTGAGGTTTGT...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGACTTGGCGTTCTTGTTaGAGTCGTGGGTCCCATCCG +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQTWRSC*SRGSHP
Trigger: CGGATGGGACCCACGACTGCAACAAGAACGCCAAGT...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTCCCAGGCCAGCCCCATaGTGGAGCTGTTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIPRPAP*WSCWCP
Trigger: TGGGCACCAACAGCTCCACCATGGGGCTGGCCTGGG...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGTGCGGATGGCAGGGCTaGAACCATTCACCACGTTGT +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQCGWQG*NHSPRC
Trigger: ACAACGTGGTGAATGGTTCCAGCCCTGCCATCCGCA...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTCTCCCCTTAGTGCTTTaGCCTCTGCTCCCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSLPLVL*PLLPVF
Trigger: GAACACGGGGAGCAGAGGCCAAAGCACTAAGGGGAG...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTAGAGCCGGATCCTTGTaGTCACACCATCACCACATG +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPRAGSL*SHHHHM
Trigger: CATGTGGTGATGGTGTGATCACAAGGATCCGGCTCT...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGGCTCTCCATTGTGGTTaGAGCAGGCATCAGGCACTT +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQALHCG*SRHQAL
Trigger: AAGTGCCTGATGCCTGCTTCAACCACAATGGAGAGC...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTCTTATGGGGGCCCTTaGCTTAGGGATAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHSYGGP*LRDNFS
Trigger: AGAGAAATTATCCCTAAGTCAAGGGCCCCCATAAGA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTCTGGAATGCGGTTGGTaGCACACACATGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPLECGW*HTHASG
Trigger: TCCTGATGCATGTGTGTGGCACCAACCGCATTCCAG...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTGAGGAAACCCTTTTCTaGCCGCACAGCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSEETLF*PHSIHQ
Trigger: CTGGTGGATGCTGTGCGGGCAGAAAAGGGTTTCCTC...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTCCAGGGCCAGCAGCGTaGCCCGGGTCTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIPGPAA*PGSSSS
Trigger: AGATGAAGAAGACCCGGGGCACGCTGCTGGCCCTGG...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTGGGGTGTGGGGTTGTTaGAGAGACGACTACGTTTCT +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVGVWGC*RDDYVS
Trigger: AGAAACGTAGTCGTCTCTGCAACAACCCCACACCCC...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATCATCAGGCACTTCTTTaGACTCATCAACATCTGTGC +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHHQALL*THQHLC
Trigger: GCACAGATGTTGATGAGTGCAAAGAAGTGCCTGATG...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCGTGGGTCCCATCCGTaGAGGGGTTACGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFRGSHP*RGYGAC
Trigger: GCAAGCCCCGTAACCCCTGCACGGATGGGACCCACG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTAGTGGCCCAGGTAGTTaGACTTGGCGTTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVSGPGS*TWRSCC
Trigger: GCAACAAGAACGCCAAGTGCAACTACCTGGGCCACT...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTGTTCCAGGACCATGCTaGACAGCTCATCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVVPGPC*TAHHRR
Trigger: TCTCCTGTGATGAGCTGTCCAGCATGGTCCTGGAAC...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTTGCACACCTGTTTGTTaGCCGTGGCATGTTCGACAC +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPCTPVC*PWHVRH
Trigger: GTGTCGAACATGCCACGGCCAACAAACAGGTGTGCA...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTAGCAGCCTTTGTTCCTaGGGATGTCTTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSSSLCS*GCLLVW
Trigger: CCACACCAGAAGACATCCTCAGGAACAAAGGCTGCT...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACGAGCGGCCGCGCTGCTaGATTCCATTGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDERPRC*IPLPQL
Trigger: GAGCTGTGGCAATGGAATTCAGCAGCGCGGCCGCTC...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTGTCCAGGATCACAGTTaGCAGTCTGGACGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVVQDHS*QSGRVL
Trigger: AAGAACTCGTCCAGACTGTCAACTGTGATCCTGGAC...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTCCACCAATTTCAATGTaGCCAGGCAATGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSPPISM*PGNGSQ
Trigger: CTGGCTGCCATTGCCTGGTCACATTGAAATTGGTGG...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGAGGTCAGTCTTAGGGTaGAACTGGAACATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQRSVLG*NWNMPG
Trigger: TCCAGGCATGTTCCAGTTTCACCCTAAGACTGACCT...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCGCGGGGAATGCCTGTaGGTCCGGAGTAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFRGECL*VRSRGC
Trigger: GCAACCTCTACTCCGGACGCACAGGCATTCCCCGCG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTATGCCGCAGATGGCTTaGAAGTCCTTTGTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVMPQMA*KSFVLW
Trigger: CCACAAGACAAAGGACTTGCAAGCCATCTGCGGCAT...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTGGCAGGCGTCTTTCTTaGAGGCTTTGGTCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGGRRLS*RLWSPA
Trigger: CGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCC...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTCAGCGTAGCCAGGCTTaGACTCGCAGCGGTACATGG +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIQRSQA*TRSGTW
Trigger: CCATGTACCGCTGCGAGTGCAAGCCTGGCTACGCTG...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTCACAGGTATCTCCAATaGGGTCTGAGTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVHRYLQ*GLSQSP
Trigger: TGGACTCTGACTCAGACCGCATTGGAGATACCTGTG...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTGCTTGGCTCAACATTaGAAGGACAGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSCLAQH*KDSSSL
Trigger: GAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCA...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTGCATCCACCAGGTCTTaGAACTTGTCATCAGGCACA +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPASTRS*NLSSGT
Trigger: TGTGCCTGATGACAAGTTCCAAGACCTGGTGGATGC...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTACCACGCTGAAGACCTaGCCAGAGTGGTCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLTTLKT*PEWSFR
Trigger: GCGGAAAGACCACTCTGGCCAGGTCTTCAGCGTGGT...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTACGTGCTGCTTTCCTTaGACGGTCAGGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLTCCFP*TVRLRS
Trigger: GGACCTCAGCCTGACCGTCCAAGGAAAGCAGCACGT...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTTGCGATGCGGAGTCTaGCGATGCTGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICILRCGV*RCWPGL
Trigger: GAGACCTGGCCAGCATCGCCAGACTCCGCATCGCAA...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTTGCTGTCCTGCAGCGTaGTCACAATGGTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGCCPAA*SQWCAG
Trigger: GCCTGCGCACCATTGTGACCACGCTGCAGGACAGCA...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTGCCGCCTCAGCTCATTaGCCAACTCTTTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVAASAH*PTLCSL
Trigger: AAGAGAACAAAGAGTTGGCCAATGAGCTGAGGCGGC...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTGGTCCACTCGGACCATaGAGACCAGCCATCGTCCGC +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFGPLGP*RPAIVR
Trigger: GCGGACGATGGCTGGTCTCCATGGTCCGAGTGGACC...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTGGTTTCCCGTTCATCTaGGGGCTGGGAGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLGFPFI*GLGELQ
Trigger: CTGCAACTCTCCCAGCCCCCAGATGAACGGGAAACC...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTTTCTTGTTGCAGTCGTaGGTCCCATCCGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLFLLQS*VPSVQG
Trigger: CCCCTGCACGGATGGGACCCACGACTGCAACAAGAA...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCCAGGTAGTTGCACTTaGCGTTCTTGTTGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQPGSCT*RSCCSR
Trigger: ACGACTGCAACAAGAACGCCAAGTGCAACTACCTGG...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTCTTCCTGCCCTGAGTTaGGAAGGTTGGGGCAATTAT +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVLPALS*EGWGNY
Trigger: ATAATTGCCCCAACCTTCCCAACTCAGGGCAGGAAG...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACGAGCCCTCGTGGGGTTaGTGTCCCAGTAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDEPSWG*CPSRTG
Trigger: CCCAGTCCTACTGGGACACCAACCCCACGAGGGCTC...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCACAGGGTGCGCACCTaGCCAGGGGTGTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFHRVRT*PGVFPV
Trigger: CACAGGAAACACCCCTGGCCAGGTGCGCACCCTGTG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 72 bp TTTACTTCCGAAGTGTCTCCACAACATGCAATCGTGTaGCCCACCCAAGGCATCATTCGTGGGTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: FTSEVSPQHAIV*PTQGIIRGSEN
Trigger: ATTTTCTGACCCACGAATGATGCCTTGGGTGGGCAACACGATTGCATGTTGTGGAGACACTTCGGAAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTCCCCTCCTCCACAGGTaGCAGAACAGATGTCCCATG +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIPLLHR*QNRCPM
Trigger: CATGGGACATCTGTTCTGTCACCTGTGGAGGAGGGG...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTTGTCCTCCCCGCAGATaGTGCCATTGCCAGCGTAGC +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFCPPRR*CHCQRS
Trigger: GCTACGCTGGCAATGGCATCATCTGCGGGGAGGACA...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGACGAGTTCTTTACCCTaGTGGCGTACAACCCAGTTA +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQTSSLP*WRTTQL
Trigger: TAACTGGGTTGTACGCCATCAGGGTAAAGAACTCGT...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTTCTTTCCAGCCTATGTaGCGAGGGTCATGCCACAGG +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLSFQPM*RGSCHR
Trigger: CCTGTGGCATGACCCTCGTCACATAGGCTGGAAAGA...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTCACCAACGCAGTCCTTaGCTCCAAACTGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGHQRSP*LQTGVW
Trigger: CCACACCCCAGTTTGGAGGCAAGGACTGCGTTGGTG...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCAACATAAAAGCGGCTaGTGGACTGGTAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQQHKSG*WTGSQR
Trigger: TCTTTGGCTACCAGTCCAGCAGCCGCTTTTATGTTG...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTCAGGCATCCATCAATTaGACAGTCCTGCTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPQASIN*TVLLVA
Trigger: TGCAACAAGCAGGACTGTCCAATTGATGGATGCCTG...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTACTCGCAGCGGTACATaGGGTCGCTATAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLITRSGT*GRYSGP
Trigger: TGGGCCACTATAGCGACCCCATGTACCGCTGCGAGT...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTACACCAGGTTCTCATTaGGCCAGCCATCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLTPGSH*ASHPGL
Trigger: CAGACCTGGATGGCTGGCCCAATGAGAACCTGGTGT...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTGTGTCTGCCTGATCTaGGTTGTGGTTGTAGGGACA +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSCVCLI*VVVVGT
Trigger: TGTCCCTACAACCACAACCCAGATCAGGCAGACACA...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTCATTGGAGCAGGGCATaGTGGGGCAGGACACCTTTT +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGHWSRA*WGRTPF
Trigger: AAAAGGTGTCCTGCCCCATCATGCCCTGCTCCAATG...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTCTCTTGTCACACTCCTaGATGTGGCAGGTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLILLSHS*MWQVRV
Trigger: GACACGGACCTGCCACATTCAGGAGTGTGACAAGAG...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTGTCCTGAGTCAGCCATaGTTTTCTTCCCTTCATACA +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPVLSQP*FSSLHT
Trigger: TGTATGAAGGGAAGAAAATCATGGCTGACTCAGGAC...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTTCTAGGAGTCCACACTaGTGCAAGCACAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPSRSPH*CKHRKE
Trigger: TTCTTTTCTGTGCTTGCATCAGTGTGGACTCCTAGA...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACGTCCGGAGTAGAGGTTaGTCCTGGAGAGCGACAGGA +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDVRSRG*SWRATG
Trigger: TCCTGTCGCTCTCCAGGAGCAACCTCTACTCCGGAC...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTCGGGTCTTCTTCATCTaGCTCAGGGATGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGRVFFI*LRDARR
Trigger: CCTTCTGGCATCCCTGAGGCAGATGAAGAAGACCCG...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTTTGCGGATGCTGTCCTaGAGCGTGGTCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGLRMLS*SVVTMV
Trigger: CACCATTGTGACCACGCTGCAGGACAGCATCCGCAA...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTAGGGGTTACGGGGCTTaGACACCTGTTTGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFRGYGA*TPVCWP
Trigger: CGGCCAACAAACAGGTGTGCAAGCCCCGTAACCCCT...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTCAATCGTCTCGGGTATaGGCCCTCCCCTTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIQSSRV*ALPLVL
Trigger: AAGCACTAAGGGGAGGGCGCATACCCGAGACGATTG...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTCTGGTGAAGACGCTTTaGATGGGGACGTCCAACTCA +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLLVKTL*MGTSNS
Trigger: TGAGTTGGACGTCCCCATCCAAAGCGTCTTCACCAG...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGGGATGTCTTCTGGTGTaGTTCCAAAGACAAACCTCA +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQGCLLV*FQRQTS
Trigger: TGAGGTTTGTCTTTGGAACCACACCAGAAGACATCC...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTCTTTCTTGCAGGCTTTaGTCTCCCGCGCTTCGCCTT +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLILSCRL*SPALRL
Trigger: AAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAG...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTCGGTGCTCTCCATTGTaGTTGAAGCAGGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIRCSPL*LKQASG
Trigger: GCCTGATGCCTGCTTCAACCACAATGGAGAGCACCG...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTCATGGTCAGCCTGGTTaGCATTGGGCACATAGGGAC +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIHGQPG*HWAHRD
Trigger: GTCCCTATGTGCCCAATGCCAACCAGGCTGACCATG...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTCCTTCTGGTCGGGATTaGGCACGAGTCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGPSGRD*ARVCSC
Trigger: ACAACTGCAGACTCGTGCCCAATCCCGACCAGAAGG...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCCGTCAGAGTCCTTCTaGTCGGGATTGGGCACGAGT +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFPSESF*SGLGTS
Trigger: ACTCGTGCCCAATCCCGACCAGAAGGACTCTGACGG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTGGGGTAAAACAGTATTaGAGACCTCATGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVGVKQY*RPHGFL
Trigger: AAGAAAGCCATGAGGTCTTCAATACTGTTTTACCCC...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCGCCAGACTCTGGAATaGGGTTGGTGCCACACACAT +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFRQTLE*GWCHTH
Trigger: ATGTGTGTGGCACCAACCGCATTCCAGAGTCTGGCG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACACAGACACCACGTGCTaGTTTCCTTGGACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDTDTTC*FPWTVR
Trigger: CCTGACCGTCCAAGGAAAGCAGCACGTGGTGTCTGT...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCAGTCACTTTGCGGATaGTGTCCTGCAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFQSLCG*CPAAWS
Trigger: TGACCACGCTGCAGGACAGCATCCGCAAAGTGACTG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTTCTCTTCAGTCACTTTaGGGATGCTGTCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGSLQSL*GCCPAA
Trigger: CGCTGCAGGACAGCATCCGCAAAGTGACTGAAGAGA...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTAAATATAAGCACGGCTaGCCCTCCTTTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIKYKHG*PSFGRQ
Trigger: CTGCCTCCCAAAGGAGGGGCAGCCGTGCTTATATTT...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTTGGGAATACTTCTCTaGAGAGTTTTTATGCTATGT +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHLGILL*RVFMLC
Trigger: ACATAGCATAAAAACTCTGCAGAGAAGTATTCCCAA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACCTCCAAACTGGGGTGTaGGGTTGTTGCAGAGACGAC +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDLQTGV*GCCRDD
Trigger: GTCGTCTCTGCAACAACCCCACACCCCAGTTTGGAG...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTTCCTTGCCTCCAAACTaGGGTGTGGGGTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFSLPPN*GVGLLQ
Trigger: CTGCAACAACCCCACACCCCAGTTTGGAGGCAAGGA...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTAGTGGTAAGTCGCATTaGCCACGCACACCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLISGKSH*PRTPGS
Trigger: AGAACCTGGTGTGCGTGGCCAATGCGACTTACCACT...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTGGGTTGTAATGGAATaGACAGTTGTCCCTGTCATC +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSWVVME*TVVPVI
Trigger: GATGACAGGGACAACTGTCCATTCCATTACAACCCA...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTCAGCCTGGTTGGCATTaGGCACATAGGGACAGTTGT +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIQPGWH*AHRDSC
Trigger: ACAACTGTCCCTATGTGCCCAATGCCAACCAGGCTG...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTTCCACTGCTCAGAGATaGCCTCACAATAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGSTAQR*PHNSTL
Trigger: CAGGGTGCTATTGTGAGGCCATCTCTGAGCAGTGGA...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTCAACAAAGATGACATaGATAGTCTTTACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHSTKMT*IVFTLL
Trigger: AAGAAGCGTAAAGACTATCCATGTCATCTTTGTTGA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTGGGCAATTGTCACACTaGTCTCCAACCCCATCCATA +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIGQLSH*SPTPSI
Trigger: TATGGATGGGGTTGGAGATCAGTGTGACAATTGCCC...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTGAAGCCAAGGAGAAGTaGTCCTGGGGGTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIEAKEK*SWGFSQ
Trigger: TTGAGAAAACCCCCAGGATCACTTCTCCTTGGCTTC...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGAGCAGCTTATTAGACTaGTTTTCCTTGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQSSLLD*FSLCCS
Trigger: AGAACAGCACAAGGAAAATCAGTCTAATAAGCTGCT...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTACTGCAAAGGGCTTATaGCTTTATAGTTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPTAKGL*LYSLLL
Trigger: CAGAAGCAAACTATAAAGTCATAAGCCCTTTGCAGT...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACTTGGTGCCACACACATaGATCAGGAACAGGACGCCT +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDLVPHT*IRNRTP
Trigger: AGGCGTCCTGTTCCTGATGCATGTGTGTGGCACCAA...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTGCTCATCACAGGAGATaGCGCAGATGGCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFAHHRR*RRWLAS
Trigger: ACTTGCAAGCCATCTGCGGCATCTCCTGTGATGAGC...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTGTCTCCATCAATGTCTaGAGCACAGGCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFVSINV*STGVSF
Trigger: GAAGGAGACGCCTGTGCTGCAGACATTGATGGAGAC...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTCACAGGCATCTCCCTTaGCATCTTTGTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIHRHLP*HLCHGQ
Trigger: CTGACCATGACAAAGATGGCAAGGGAGATGCCTGTG...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGATTGGGCACGAGTCTaGAGTTGTCCTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIDWARV*SCPCHQ
Trigger: CTGATGACAAGGACAACTGCAGACTCGTGCCCAATC...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTCATAGTTCCAGAAGGTaGAATACCAGCATTGGTTTA +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVHSSRR*NTSIGL
Trigger: TAAACCAATGCTGGTATTGCACCTTCTGGAACTATG...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTACTCTGGAATGCGGTTaGTGCCACACACATGCATCA +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICITLECG*CHTHAS
Trigger: TGATGCATGTGTGTGGCACCAACCGCATTCCAGAGT...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTAGGAGATGCCGCAGATaGCTTGCAAGTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIRRCRR*LASPLS
Trigger: AGACAAAGGACTTGCAAGCCATCTGCGGCATCTCCT...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTTGCTTGTTGCAGATCTaGTTTTCTGTTACATCACCA +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVCLLQI*FSVTSP
Trigger: TGGTGATGTAACAGAAAACCAGATCTGCAACAAGCA...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGATAGTCATACTGAGCTaGGTTGTAATGGAATGGACA +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQIVILS*VVMEWT
Trigger: TGTCCATTCCATTACAACCCAGCTCAGTATGACTAT...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTCAGTTAGGGTCATTTTaGGATGTCCCTTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGQLGSF*DVPLGS
Trigger: GGACCCCAAAGGGACATCCCAAAATGACCCTAACTG...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACGTGACAAAGGCAGAGTaGAATGGGCACCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDVTKAE*NGHLPN
Trigger: GTTGGGAAGGTGCCCATTCCACTCTGCCTTTGTCAC...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTAATGTGACCAGGCAATaGCAGCCAGCACTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFNVTRQ*QPALPY
Trigger: GTAAGGCAGTGCTGGCTGCCATTGCCTGGTCACATT...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTCCAAGGCATCATTCGTaGGTCAGAAAATGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLPRHHS*VRKCRC
Trigger: ACAGCGACATTTTCTGACCCACGAATGATGCCTTGG...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTAGTTGTCCCGTTCATTaGGGATACCGTCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICISCPVH*GYRLHQ
Trigger: TTGATGGAGACGGTATCCTCAATGAACGGGACAACT...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCAGAAAATGTCGCTGTaGGAGTTGCGTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFQKMSL*ELRVLQ
Trigger: CTGAAGCACACGCAACTCTCACAGCGACATTTTCTG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACGTGTTCTCACACCGGTaGTCTCCATTGTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDVFSHR*SPLWLK
Trigger: CTTCAACCACAATGGAGAGCACCGGTGTGAGAACAC...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTTTAAGTAATGAATTCTaGCATAAAAGAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPLSNEF*HKRGGT
Trigger: GGTCCCACCTCTTTTATGGCAGAATTCATTACTTAA...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTTGTCCAGATTGTTCTaGTGGCCATCTTCATCAATA +
Preference number: 4 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSLSRLF*WPSSSI
Trigger: TATTGATGAAGATGGCCACCAGAACAATCTGGACAA...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTTTGGGATGTCCCTTTaGGGTCCAGAGGAATCATCT +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIFGMSL*GPEESS
Trigger: AGATGATTCCTCTGGACCCCAAAGGGACATCCCAAA...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTGTGCAATACCAGCATTaGTTTATGATCAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPVQYQH*FMISLS
Trigger: TGAAAGACTGATCATAAACCAATGCTGGTATTGCAC...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTAATATGCACAAGGGATaGGGTAAAACAGTATTGAAG +
Preference number: 4 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVNMHKG*GKTVLK
Trigger: CTTCAATACTGTTTTACCCCATCCCTTGTGCATATT...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCCTGCTTCTTCACCTTaGTACTATAAAATGATTTGG +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQPASSP*YYKMIW
Trigger: CCAAATCATTTTATAGTACCAAGGTGAAGAAGCAGG...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTTTTGCAGATGGTAACTaGGTTCTGACAGTGACACTC +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIFADGN*VLTVTL
Trigger: GAGTGTCACTGTCAGAACTCAGTTACCATCTGCAAA...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTAAAACTGCATTTTCTTaGGGCAGGTCGCACGTTCTA +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIKTAFS*GRSHVL
Trigger: TAGAACGTGCGACCTGCCTCAAGAAAATGCAGTTTT...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTCTTCTTCCTGTTCCATaGATAATCCTTCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLLLPVP*IILQPD
Trigger: ATCTGGCTGAAGGATTATTCATGGAACAGGAAGAAG...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTGACAGTGACACTCAGTaGAGCTATCAACAGTCCATT +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGDSDTQ*SYQQSI
Trigger: AATGGACTGTTGATAGCTGCACTGAGTGTCACTGTC...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTGGCAATTATCCTTTTTaGAGTGGTAAGTCGCATTGG +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLGNYPF*SGKSHW
Trigger: CCAATGCGACTTACCACTGCAAAAAGGATAATTGCC...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTTGTCGCTGTGAGAGTTaGGTGTGCTTCAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGCRCES*VCFSVF
Trigger: AAAAACACTGAAGCACACGCAACTCTCACAGCGACA...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACAACATGCAATCGTGTTaGCCACCCAAGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDNMQSC*PPKASF
Trigger: GAATGATGCCTTGGGTGGGCAACACGATTGCATGTT...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACAGACCTGGAGTTTATTaGTCTTCACTCGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDRPGVY*SSLELS
Trigger: GGAGAGCTCGAGTGAAGAGCAATAAACTCCAGGTCT...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTCTGAGTTGGGAAGGTTaGGGCAATTATCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICILSWEG*GNYPFC
Trigger: GCAAAAAGGATAATTGCCCCAACCTTCCCAACTCAG...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTTCTGGCACACTGTCATaGTCAAAATCATCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLSGTLS*SKSSLQ
Trigger: CTGCAAAGATGATTTTGACCATGACAGTGTGCCAGA...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCATTCTTATAAGACCTaGAGTTTATTGCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQHSYKT*SLLLFT
Trigger: AGTGAAGAGCAATAAACTCCAGGTCTTATAAGAATG...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTGTTTGCTTCTGCCAATaGTATTTGGGACATAGTGAG +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIVCFCQ*YLGHSE
Trigger: CTCACTATGTCCCAAATATCATTGGCAGAAGCAAAC...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTGACAGTCCTGCTTGTTaGAGATCTGGTTTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIDSPAC*RSGFLL
Trigger: TAACAGAAAACCAGATCTGCAACAAGCAGGACTGTC...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTGTGAGAGTTGCGTGTaGTTCAGTGTTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICICESCV*FSVFPF
Trigger: AAAGGGAAAAACACTGAAGCACACGCAACTCTCACA...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACGATGTCATCGATGTCTaGCACACTGTCATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDDVIDV*HTVMVK
Trigger: TTTGACCATGACAGTGTGCCAGACATCGATGACATC...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTAGGAGGATGTCAGGGTaGTTTTGTTTGCTAATTCTA +
Preference number: 4 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLRRMSG*FCLLIL
Trigger: TAGAATTAGCAAACAAAACCACCCTGACATCCTCCT...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTAGCACTGCCTTACACTaGTTTGATTCTGATTCCCTA +
Preference number: 4 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGSTALH*FDSDSL
Trigger: TAGGGAATCAGAATCAAACCAGTGTAAGGCAGTGCT...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTGGTATCTGTAATGCTTaGCTCAACATTGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIGICNA*LNIART
Trigger: TGTCCTTGCAATGTTGAGCCAAGCATTACAGATACC...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 72 bp CTCAAGCCCATAGTTCCAGAAGGTGCAATACCAGCATaGGTTTATGATCAGTCTTTCAATCAACAATTTGAT +
Preference number: 4 (lower is better)
Translates to: LKPIVPEGAIPA*VYDQSFNQQFD
Trigger: ATCAAATTGTTGATTGAAAGACTGATCATAAACCAATGCTGGTATTGCACCTTCTGGAACTATGGGCTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 72 bp TTATTGTATGTACATTCTTATAAGACCTGGAGTTTATaGCTCTTCACTCGAGCTCTCCCACAACACATGACA +
Preference number: 4 (lower is better)
Translates to: LLYVHSYKTWSL*LFTRALPQHMT
Trigger: TGTCATGTGTTGTGGGAGAGCTCGAGTGAAGAGCAATAAACTCCAGGTCTTATAAGAATGTACATACAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACATCATAGATGGGTCCTaGGTCAGCCATGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDIIDGS*VSHDFL
Trigger: AAGAAAATCATGGCTGACTCAGGACCCATCTATGAT...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTAAGAACACCATTTCTTaGGAGAAGACAAACAACCCT +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIKNTIS*EKTNNP
Trigger: AGGGTTGTTTGTCTTCTCTCAAGAAATGGTGTTCTT...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTTATTCATTGGAGGCTaGATGCTGAGTCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICILFIGG*MLSLFL
Trigger: CAAAAACAGACTCAGCATTCAGCCTCCAATGAATAA...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACTCAATTGGACAGTCCTaGTTGTTGCAGATCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDSIGQS*LLQIWF
Trigger: AAACCAGATCTGCAACAAGCAGGACTGTCCAATTGA...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCTCCCTTCTCTGACATaGCTGAAAATGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFLPSLT*LKMLLS
Trigger: ACTCAAAAGCATTTTCAGGCATGTCAGAGAAGGGAG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACTTCTCCCTGGAAATATaGACAAGGGATGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDFSLEI*TRDGVK
Trigger: TTTTACCCCATCCCTTGTGCATATTTCCAGGGAGAA...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTAAGTGCCTATTTACATaGGTTAATCAGCTAACGCCA +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIKCLFT*VNQLTP
Trigger: TGGCGTTAGCTGATTAACCCATGTAAATAGGCACTT...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTTCTGCCAATGATATTTaGGACATAGTGAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLISANDI*DIVSLS
Trigger: AGAAAGGCTCACTATGTCCCAAATATCATTGGCAGA...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 72 bp TTTAACAAGTCCTTTATTTCAGTACAACCTGATTATTaGAAGGTCAGTCTTAGGGTGAAACTGGAACATGCC +
Preference number: 4 (lower is better)
Translates to: FNKSFISVQPDY*KVSLRVKLEHA
Trigger: GGCATGTTCCAGTTTCACCCTAAGACTGACCTTCAAATAATCAGGTTGTACTGAAATAAAGGACTTGTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTCAGCACTTCAAACGTTaGACTCTTCTGATAATGAAT +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIQHFKR*TLLIMN
Trigger: ATTCATTATCAGAAGAGTTCAACGTTTGAAGTGCTG...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR GCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTCCTTGTGCTGTTCTTaGAAGAGATTTGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICISLCCS*KRFADK
Trigger: TTTATCAGCAAATCTCTTGCAAGAACAGCACAAGGA...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTGTTGTCCCTGTCATCTaGAATTTTATCATTGTCATC +
Preference number: 4 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIVVPVI*NFIIVI
Trigger: GATGACAATGATAAAATTCCAGATGACAGGGACAAC...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTATGCTATTTCCTTATTaGGAATACTTCTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIMLFPY*EYFSAE
Trigger: CTCTGCAGAGAAGTATTCCCAATAAGGAAATAGCAT...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACGCTTATTGGTACACTTaGGCCTTTTCTTCACATGAT +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDAYWYT*AFSSHD
Trigger: ATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGC...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTAAGCTACATCTAGAATaGAGCCACCAATTTCAATGT +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFKLHLE*SHQFQC
Trigger: ACATTGAAATTGGTGGCTTCATTCTAGATGTAGCTT...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACTGCTATGTACAACACTaGCTTTTTAGGTACTACAGT +
Preference number: 4 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDCYVQH*LFRYYS
Trigger: ACTGTAGTACCTAAAAAGTCAGTGTTGTACATAGCA...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR TCA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCATATCTACACAATCTaGGATATCTATTCCAATGGC +
Preference number: 4 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFHIYTI*DIYSNG
Trigger: GCCATTGGAATAGATATCTCAGATTGTGTAGATATG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
3UTR CAA 72 bp TATTGGTACACTTGGGCCTTTTCTTCACATGATAATTaGTATTTAGACACACACGCATTTATGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: YWYTWAFSSHDN*YLDTHAFMDSF
Trigger: GAAGGAATCCATAAATGCGTGTGTGTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp CCAGCAGGGATCCTGTGTGTACCGGAGCGCGGCGGCCGGGAGCGGTaGCGAGGGCGGCGAGGGCTGGAGGGGCGCGGGGAATGCCTGTGC +
Preference number: 5 (lower is better)
Translates to: PAGILCVPERGGRER*RGRRGLEGRGECLC
Trigger: GCACAGGCATTCCCCGCGCCCCTCCAGCCCTCGCCGCCCTCGCCACCGCTCCCGGCCGCCGCGCTCCGGTACACACAGGATCCCTGCTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp TACCGGAGCGCGGCGGCCGGGAGCGGTGGCGAGGGCGGCGAGGGCTaGAGGGGCGCGGGGAATGCCTGTGCGTCCGGAGTAGAGGTTGCT +
Preference number: 5 (lower is better)
Translates to: YRSAAAGSGGEGGEG*RGAGNACASGVEVA
Trigger: AGCAACCTCTACTCCGGACGCACAGGCATTCCCCGCGCCCCTCCAGCCCTCGCCGCCCTCGCCACCGCTCCCGGCCGCCGCGCTCCGGTA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS GCA 90 bp GGGCTGGAGGGGCGCGGGGAATGCCTGTGCGTCCGGAGTAGAGGTTaGTCCTGGAGAGCGACAGGAGCCCTGAACTCGCAGGCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GLEGRGECLCVRSRG*SWRATGALNSQASS
Trigger: CGAGCTGGCCTGCGAGTTCAGGGCTCCTGTCGCTCTCCAGGAGCAACCTCTACTCCGGACGCACAGGCATTCCCCGCGCCCCTCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS CCA 90 bp AGGTCCAGGGTGCCCGCCTTGCCATTGGACACCACGCTGAAGACCTaGCCAGAGTGGTCTTTCCGCTCCAGGGCCAGCAGCGTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: RSRVPALPLDTTLKT*PEWSFRSRASSVPR
Trigger: CCGGGGCACGCTGCTGGCCCTGGAGCGGAAAGACCACTCTGGCCAGGTCTTCAGCGTGGTGTCCAATGGCAAGGCGGGCACCCTGGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp GTGCCCGCCTTGCCATTGGACACCACGCTGAAGACCTGGCCAGAGTaGTCTTTCCGCTCCAGGGCCAGCAGCGTGCCCCGGGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VPALPLDTTLKTWPE*SFRSRASSVPRVFF
Trigger: GAAGAAGACCCGGGGCACGCTGCTGGCCCTGGAGCGGAAAGACCACTCTGGCCAGGTCTTCAGCGTGGTGTCCAATGGCAAGGCGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS TCA 90 bp GGCCCTTCACCAGTCGGCGCCCAGACCCCTTGCGGGCGGCCCCGGTaGGTTCAAAGATGTCAAACACGCTGTTGTCTCCGCCAGACTCTG +
Preference number: 5 (lower is better)
Translates to: GPSPVGAQTPCGRPR*VQRCQTRCCLRQTL
Trigger: CAGAGTCTGGCGGAGACAACAGCGTGTTTGACATCTTTGAACTCACCGGGGCCGCCCGCAAGGGGTCTGGGCGCCGACTGGTGAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS GCA 90 bp CACTGGCCGGTTGCCAGGAGAGCTTCTTCCACAGACACCACGTGCTaGTTTCCTTGGACGGTCAGGCTGAGGTCCAGGGTGCCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: HWPVARRASSTDTTC*FPWTVRLRSRVPAL
Trigger: CAAGGCGGGCACCCTGGACCTCAGCCTGACCGTCCAAGGAAAGCAGCACGTGGTGTCTGTGGAAGAAGCTCTCCTGGCAACCGGCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 90 bp TTCCACTGGCCGGTTGCCAGGAGAGCTTCTTCCACAGACACCACGTaGTGCTTTCCTTGGACGGTCAGGCTGAGGTCCAGGGTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: FHWPVARRASSTDTT*CFPWTVRLRSRVPA
Trigger: GGCGGGCACCCTGGACCTCAGCCTGACCGTCCAAGGAAAGCAGCACGTGGTGTCTGTGGAAGAAGCTCTCCTGGCAACCGGCCAGTGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS TCA 90 bp TGCGGATGCTGTCCTGCAGCGTGGTCACAATGGTGCGCAGGCCCCTaGGTTCCAGGACCATGCTGGACAGCTCATCACAGGAGATGCCGC +
Preference number: 5 (lower is better)
Translates to: CGCCPAAWSQWCAGP*VPGPCWTAHHRRCR
Trigger: GCGGCATCTCCTGTGATGAGCTGTCCAGCATGGTCCTGGAACTCAGGGGCCTGCGCACCATTGTGACCACGCTGCAGGACAGCATCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS TCA 90 bp TGTGGCAGGTCCGTGTCTGGACCGAGGAGCCCTCACATCGGTTGTTaGGGCTATCGCAGGAGCGGCCGCGCTGCTGAATTCCATTGCCAC +
Preference number: 5 (lower is better)
Translates to: CGRSVSGPRSPHIGC*GYRRSGRAAEFHCH
Trigger: GTGGCAATGGAATTCAGCAGCGCGGCCGCTCCTGCGATAGCCTCAACAACCGATGTGAGGGCTCCTCGGTCCAGACACGGACCTGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 90 bp CAGGGCCAGCAGCGTGCCCCGGGTCTTCTTCATCTGCCTCAGGGATaGCAGAAGGAGGAAACCCTTTTCTGCCCGCACAGCATCCACCAG +
Preference number: 5 (lower is better)
Translates to: QGQQRAPGLLHLPQG*QKEETLFCPHSIHQ
Trigger: CTGGTGGATGCTGTGCGGGCAGAAAAGGGTTTCCTCCTTCTGGCATCCCTGAGGCAGATGAAGAAGACCCGGGGCACGCTGCTGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 90 bp ATGCCAGGCAACCAGCTGGGCAGAGCTGCTGCCCATGCTCACCCTTaGAGCGGACCTCACACTTACTGGGGCAGGCGTCTTTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: MPGNQLGRAAAHAHP*SGPHTYWGRRLSCR
Trigger: CCTGCAAGAAAGACGCCTGCCCCAGTAAGTGTGAGGTCCGCTGCAAGGGTGAGCATGGGCAGCAGCTCTGCCCAGCTGGTTGCCTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS CCA 90 bp ACACATGCATCAGGAACAGGACGCCTAGTCCCCAGGCCAGCCCCATaGTGGAGCTGTTGGTGCCCAGCAGGGATCCTGTGTGTACCGGAG +
Preference number: 5 (lower is better)
Translates to: THASGTGRLVPRPAP*WSCWCPAGILCVPE
Trigger: CTCCGGTACACACAGGATCCCTGCTGGGCACCAACAGCTCCACCATGGGGCTGGCCTGGGGACTAGGCGTCCTGTTCCTGATGCATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 90 bp CTGTTGTCTCCGCCAGACTCTGGAATGCGGTTGGTGCCACACACATaGATCAGGAACAGGACGCCTAGTCCCCAGGCCAGCCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: LLSPPDSGMRLVPHT*IRNRTPSPQASPMV
Trigger: CACCATGGGGCTGGCCTGGGGACTAGGCGTCCTGTTCCTGATGCATGTGTGTGGCACCAACCGCATTCCAGAGTCTGGCGGAGACAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS GCA 90 bp TCTTTCCGCTCCAGGGCCAGCAGCGTGCCCCGGGTCTTCTTCATCTaGCTCAGGGATGCCAGAAGGAGGAAACCCTTTTCTGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: SFRSRASSVPRVFFI*LRDARRRKPFSART
Trigger: TGTGCGGGCAGAAAAGGGTTTCCTCCTTCTGGCATCCCTGAGGCAGATGAAGAAGACCCGGGGCACGCTGCTGGCCCTGGAGCGGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 90 bp CACCCTTGCAGCGGACCTCACACTTACTGGGGCAGGCGTCTTTCTTaGAGGCTTTGGTCTCCCGCGCTTCGCCTTCACAGGGTTTCCCGT +
Preference number: 5 (lower is better)
Translates to: HPCSGPHTYWGRRLS*RLWSPALRLHRVSR
Trigger: ACGGGAAACCCTGTGAAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCCCAGTAAGTGTGAGGTCCGCTGCAAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS TCA 90 bp CCCTCACATCGGTTGTTGAGGCTATCGCAGGAGCGGCCGCGCTGCTaGATTCCATTGCCACAGCTCGTAGAACAGGAGGTCCACTCGGAC +
Preference number: 5 (lower is better)
Translates to: PSHRLLRLSQERPRC*IPLPQLVEQEVHSD
Trigger: GTCCGAGTGGACCTCCTGTTCTACGAGCTGTGGCAATGGAATTCAGCAGCGCGGCCGCTCCTGCGATAGCCTCAACAACCGATGTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp AGCTGGGCCCTGTCTTCCTGCACAAACAGGGTGATGCTCTTCCACTaGCCGGTTGCCAGGAGAGCTTCTTCCACAGACACCACGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SWALSSCTNRVMLFH*PVARRASSTDTTCC
Trigger: GCAGCACGTGGTGTCTGTGGAAGAAGCTCTCCTGGCAACCGGCCAGTGGAAGAGCATCACCCTGTTTGTGCAGGAAGACAGGGCCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp AATTCCATTGCCACAGCTCGTAGAACAGGAGGTCCACTCGGACCATaGAGACCAGCCATCGTCCGCAGAGTCGCTGGGCCAACAGCGAGG +
Preference number: 5 (lower is better)
Translates to: NSIATARRTGGPLGP*RPAIVRRVAGPTAR
Trigger: CCTCGCTGTTGGCCCAGCGACTCTGCGGACGATGGCTGGTCTCCATGGTCCGAGTGGACCTCCTGTTCTACGAGCTGTGGCAATGGAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp AGCGGACCTCACACTTACTGGGGCAGGCGTCTTTCTTGCAGGCTTTaGTCTCCCGCGCTTCGCCTTCACAGGGTTTCCCGTTCATCTGGG +
Preference number: 5 (lower is better)
Translates to: SGPHTYWGRRLSCRL*SPALRLHRVSRSSG
Trigger: CCCAGATGAACGGGAAACCCTGTGAAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCCCAGTAAGTGTGAGGTCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS TCA 90 bp CCCCCTTTGCGATGCGGAGTCTGGCGATGCTGGCCAGGTCTCTGGTaGAGACGCTTTGGATGGGGACGTCCAACTCAGCATTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: PPLRCGVWRCWPGLW*RRFGWGRPTQHSPS
Trigger: AGATGGAGAATGCTGAGTTGGACGTCCCCATCCAAAGCGTCTTCACCAGAGACCTGGCCAGCATCGCCAGACTCCGCATCGCAAAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 90 bp GGTAGTTGCACTTGGCGTTCTTGTTGCAGTCGTGGGTCCCATCCGTaGAGGGGTTACGGGGCTTGCACACCTGTTTGTTGGCCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: GSCTWRSCCSRGSHP*RGYGACTPVCWPWH
Trigger: ATGCCACGGCCAACAAACAGGTGTGCAAGCCCCGTAACCCCTGCACGGATGGGACCCACGACTGCAACAAGAACGCCAAGTGCAACTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS TCA 90 bp CACAGTCGATGTACAGCTGGGCCCTGTCTTCCTGCACAAACAGGGTaGTGCTCTTCCACTGGCCGGTTGCCAGGAGAGCTTCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: HSRCTAGPCLPAQTG*CSSTGRLPGELLPQ
Trigger: CTGTGGAAGAAGCTCTCCTGGCAACCGGCCAGTGGAAGAGCATCACCCTGTTTGTGCAGGAAGACAGGGCCCAGCTGTACATCGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATACGGCTGCCCCTCCTTaGGGAGGCAGCTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHTAAPP*GGSWCS
Trigger: TGAGCACCAGCTGCCTCCCAAAGGAGGGGCAGCCGT...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp ATGCGGAGTCTGGCGATGCTGGCCAGGTCTCTGGTGAAGACGCTTTaGATGGGGACGTCCAACTCAGCATTCTCCATCTTTTCACAGTCG +
Preference number: 5 (lower is better)
Translates to: MRSLAMLARSLVKTL*MGTSNSAFSIFSQS
Trigger: CGACTGTGAAAAGATGGAGAATGCTGAGTTGGACGTCCCCATCCAAAGCGTCTTCACCAGAGACCTGGCCAGCATCGCCAGACTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS TCA 90 bp TGTAGCCGGGGTCCGTGTTCTCACACCGGTGCTCTCCATTGTGGTTaGAGCAGGCATCAGGCACTTCTTTGCACTCATCAACATCTGTGC +
Preference number: 5 (lower is better)
Translates to: CSRGPCSHTGALHCG*SRHQALLCTHQHLC
Trigger: GCACAGATGTTGATGAGTGCAAAGAAGTGCCTGATGCCTGCTTCAACCACAATGGAGAGCACCGGTGTGAGAACACGGACCCCGGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000490247.1
CDS GCA 90 bp CTTCTTCATCTGCCTCAGGGATGCCAGAAGGAGGAAACCCTTTTCTaGCCGCACAGCATCCACCAGGTCTTGGAACTTGTCATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: LLHLPQGCQKEETLF*PHSIHQVLELVIRH
Trigger: GTGCCTGATGACAAGTTCCAAGACCTGGTGGATGCTGTGCGGGCAGAAAAGGGTTTCCTCCTTCTGGCATCCCTGAGGCAGATGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 90 bp TTCTCCATCTTTTCACAGTCGATGTACAGCTGGGCCCTGTCTTCCTaGACAAACAGGGTGATGCTCTTCCACTGGCCGGTTGCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: FSIFSQSMYSWALSS*TNRVMLFHWPVARR
Trigger: TCTCCTGGCAACCGGCCAGTGGAAGAGCATCACCCTGTTTGTGCAGGAAGACAGGGCCCAGCTGTACATCGACTGTGAAAAGATGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATCAGGGGTTACGGGGCTaGCACACCTGTTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHQGLRG*HTCLLA
Trigger: GGCCAACAAACAGGTGTGCAAGCCCCGTAACCCCTG...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp GACACTGGTAGAGCTGGAGCAGCCTTTGTTCCTGAGGATGTCTTCTaGTGTGGTTCCAAAGACAAACCTCACATTCTGCAGCACCCCCTG +
Preference number: 5 (lower is better)
Translates to: DTGRAGAAFVPEDVF*CGSKDKPHILQHPL
Trigger: CAGGGGGTGCTGCAGAATGTGAGGTTTGTCTTTGGAACCACACCAGAAGACATCCTCAGGAACAAAGGCTGCTCCAGCTCTACCAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp TTTCTGTTACATCACCAACGCAGTCCTTGCCTCCAAACTGGGGTGTaGGGTTGTTGCAGAGACGACTACGTTTCTGTACCCCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: FLLHHQRSPCLQTGV*GCCRDDYVSVPLLH
Trigger: GTGGAGGAGGGGTACAGAAACGTAGTCGTCTCTGCAACAACCCCACACCCCAGTTTGGAGGCAAGGACTGCGTTGGTGATGTAACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000497720.1
CDS CCA 90 bp GGGCTGCGTGGCTCACCAATTGGACAGTCCTGCTTGTTGCAGATCTaGTTTTCTGTTACATCACCAACGCAGTCCTTGCCTCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: GLRGSPIGQSCLLQI*FSVTSPTQSLPPNW
Trigger: CCAGTTTGGAGGCAAGGACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTCTTCCACTGGCCGGTaGCCAGGAGAGCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHSSTGR*PGELLP
Trigger: TGGAAGAAGCTCTCCTGGCAACCGGCCAGTGGAAGA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATAGGAGGGAGAATTGCTaGAACCGGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHRRENC*NRGGRG
Trigger: ACCTCTGCCTCCCCGGTTCAAGCAATTCTCCCTCCT...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 90 bp TTCATCCTGGGCTGCGTGGCTCACCAATTGGACAGTCCTGCTTGTTaGAGATCTGGTTTTCTGTTACATCACCAACGCAGTCCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: FILGCVAHQLDSPAC*RSGFLLHHQRSPCL
Trigger: GAGGCAAGGACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS GCA 90 bp GCATTCAGTAAAAGAGCAAAGCTCCTGGGTCGTTTCATCCTGGGCTaGGTGGCTCACCAATTGGACAGTCCTGCTTGTTGCAGATCTGGT +
Preference number: 5 (lower is better)
Translates to: AFSKRAKLLGRFILG*VAHQLDSPACCRSG
Trigger: ACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGACCCAGGAGCTTTGCTCTTTTACTGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS CCA 90 bp ACGTCCAACTCAGCATTCTCCATCTTTTCACAGTCGATGTACAGCTaGGCCCTGTCTTCCTGCACAAACAGGGTGATGCTCTTCCACTGG +
Preference number: 5 (lower is better)
Translates to: TSNSAFSIFSQSMYS*ALSSCTNRVMLFHW
Trigger: CCAGTGGAAGAGCATCACCCTGTTTGTGCAGGAAGACAGGGCCCAGCTGTACATCGACTGTGAAAAGATGGAGAATGCTGAGTTGGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp ACTGAACTCCGTTGTGATAGCATAGGGGAGGCCGCCTCAGCTCATTaGCCAACTCTTTGTTCTCTTCAGTCACTTTGCGGATGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: TELRCDSIGEAASAH*PTLCSLQSLCGCCP
Trigger: AGGACAGCATCCGCAAAGTGACTGAAGAGAACAAAGAGTTGGCCAATGAGCTGAGGCGGCCTCCCCTATGCTATCACAACGGAGTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp CAAAGCTCCTGGGTCGTTTCATCCTGGGCTGCGTGGCTCACCAATTaGACAGTCCTGCTTGTTGCAGATCTGGTTTTCTGTTACATCACC +
Preference number: 5 (lower is better)
Translates to: QSSWVVSSWAAWLTN*TVLLVADLVFCYIT
Trigger: GGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGACCCAGGAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS CCA 90 bp CTGCAGCATTCAGTAAAAGAGCAAAGCTCCTGGGTCGTTTCATCCTaGGCTGCGTGGCTCACCAATTGGACAGTCCTGCTTGTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: LQHSVKEQSSWVVSS*AAWLTNWTVLLVAD
Trigger: ATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGACCCAGGAGCTTTGCTCTTTTACTGAATGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS-3UTR CAA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTGTGCCCGCCTTGCCATaGGACACCACGCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPVPALP*DTTLKT
Trigger: GGTCTTCAGCGTGGTGTCCAATGGCAAGGCGGGCAC...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS TCA 90 bp GCGAGTCCAGGATCACAGTTGACAGTCTGGACGAGTTCTTTACCCTaGTGGCGTACAACCCAGTTAGGGTCATTTTGGGATGTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: ASPGSQLTVWTSSLP*WRTTQLGSFWDVPL
Trigger: CAAAGGGACATCCCAAAATGACCCTAACTGGGTTGTACGCCATCAGGGTAAAGAACTCGTCCAGACTGTCAACTGTGATCCTGGACTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000484734.1
CDS TCA 90 bp ACTTTGCTTCTGTTTGTTTCTCTAGTAGGTAACCTTCCTGCTCTATaGCCCACTGAACTGCAGGCTGCAGATGCCAGGCAACCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: TLLLFVSLVGNLPAL*PTELQAADARQPAG
Trigger: CCCAGCTGGTTGCCTGGCATCTGCAGCCTGCAGTTCAGTGGGTCATAGAGCAGGAAGGTTACCTACTAGAGAAACAAACAGAAGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS GCA 90 bp AGGCATCAGGCACTTCTTTGCACTCATCAACATCTGTGCACTGGATaGCATTTCCACTGTAACCAGGGGGACAAGCACCACATTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RHQALLCTHQHLCTG*HFHCNQGDKHHISS
Trigger: GCTGGAAATGTGGTGCTTGTCCCCCTGGTTACAGTGGAAATGGCATCCAGTGCACAGATGTTGATGAGTGCAAAGAAGTGCCTGATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000490247.1
CDS CCA 90 bp TCAGTAAAAGAGCAAAGCTCCTGGGTCGTTTCATCCTGGGCTGCGTaGCTCACCAATTGGACAGTCCTGCTTGTTGCAGATCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: SVKEQSSWVVSSWAA*LTNWTVLLVADLVF
Trigger: GAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGACCCAGGAGCTTTGCTCTTTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATGATGCCGCAGATGGCTaGCAAGTCCTTTGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHDAADG*QVLCLV
Trigger: CACAAGACAAAGGACTTGCAAGCCATCTGCGGCATC...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTCCCTCACATCGGTTGTaGAGGCTATCGCAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVPSHRL*RLSQER
Trigger: CCGCTCCTGCGATAGCCTCAACAACCGATGTGAGGG...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTGGGCAGGCGTCTTTCTaGCAGGCTTTGGTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSGQASF*QALVSR
Trigger: GCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCC...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTGCTCTCCATTGTGGTaGAAGCAGGCATCAGGCACT +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHCSPLW*KQASGT
Trigger: AGTGCCTGATGCCTGCTTCAACCACAATGGAGAGCA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTTGCACACCTGTTTGTaGGCCGTGGCATGTTCGACA +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHLHTCL*AVACST
Trigger: TGTCGAACATGCCACGGCCAACAAACAGGTGTGCAA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTCTTCCTGCCCTGAGTaGGGAAGGTTGGGGCAATTA +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHSSCPE*GRLGQL
Trigger: TAATTGCCCCAACCTTCCCAACTCAGGGCAGGAAGA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCCTCCCCTTAGTGCTTaGGCCTCTGCTCCCCGTGTT +
Preference number: 5 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQPPLSA*ASAPRV
Trigger: AACACGGGGAGCAGAGGCCAAAGCACTAAGGGGAGG...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTTCCAGGGTGCCCGCCTaGCCATTGGACACCACGCTG +
Preference number: 5 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLSRVPA*PLDTTL
Trigger: CAGCGTGGTGTCCAATGGCAAGGCGGGCACCCTGGA...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATGGGCAGGACACCTTTTaGCAGATGGTAACTGAGTTC +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHGQDTF*QMVTEF
Trigger: GAACTCAGTTACCATCTGCAAAAAGGTGTCCTGCCC...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTTCAGGAACTGTGGCATaGGAGCAGGGCATGATGGGG +
Preference number: 5 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVSGTVA*EQGMMG
Trigger: CCCCATCATGCCCTGCTCCAATGCCACAGTTCCTGA...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATAGTCCAGGATCACAGTaGACAGTCTGGACGAGTTCT +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHSPGSQ*TVWTSS
Trigger: AGAACTCGTCCAGACTGTCAACTGTGATCCTGGACT...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 90 bp TTGGACAGGCATCCATCAATTGGACAGTCCTGCTTGTTGCAGATCTaGTTTTCTGTTACATCACCAACGCAGTCCTTGCCTCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: LDRHPSIGQSCLLQI*FSVTSPTQSLPPNW
Trigger: CCAGTTTGGAGGCAAGGACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGATGGATGCCTGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTTCTGGTGAAGACGCTTaGGATGGGGACGTCCAACTC +
Preference number: 5 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVSGEDA*DGDVQL
Trigger: GAGTTGGACGTCCCCATCCAAAGCGTCTTCACCAGA...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTGAGCCCTCACATCGGTaGTTGAGGCTATCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSEPSHR*LRLSQE
Trigger: CTCCTGCGATAGCCTCAACAACCGATGTGAGGGCTC...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTTGGGGTGTGGGGTTGTaGCAGAGACGACTACGTTTC +
Preference number: 5 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVWGVGL*QRRLRF
Trigger: GAAACGTAGTCGTCTCTGCAACAACCCCACACCCCA...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTCACTTGGCGTTCTTGTaGCAGTCGTGGGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSHLAFL*QSWVPS
Trigger: GGATGGGACCCACGACTGCAACAAGAACGCCAAGTG...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTTTGCACTTGGCGTTCTaGTTGCAGTCGTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPLHLAF*LQSWVP
Trigger: TGGGACCCACGACTGCAACAAGAACGCCAAGTGCAA...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATCCTGAGTTGGGAAGGTaGGGGCAATTATCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHPELGR*GQLSFL
Trigger: CAAAAAGGATAATTGCCCCAACCTTCCCAACTCAGG...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTGAACCATTCACCACGTaGTTGTCAAGGGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVEPFTT*LSRVRR
Trigger: CCTCCTCACCCTTGACAACAACGTGGTGAATGGTTC...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGTTCTCTTCAGTCACTTaGCGGATGCTGTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQFSSVT*RMLSCS
Trigger: GCTGCAGGACAGCATCCGCAAAGTGACTGAAGAGAA...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTGGCCGCCTCAGCTCATaGGCCAACTCTTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSGRLSS*ANSLFS
Trigger: AGAGAACAAAGAGTTGGCCAATGAGCTGAGGCGGCC...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTTCGTCCCTTTCGGTGTaGATGAAGAAGGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPSSLSV*MKKVPL
Trigger: CAGTGGCACCTTCTTCATCAACACCGAAAGGGACGA...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGATGCTTGGCTCAACATaGCAAGGACAGCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQMLGST*QGQLLP
Trigger: AGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCAT...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTTGGGGGCTGGGAGAGTaGCAGAGCCGGATCCTTGTG +
Preference number: 5 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFWGLGE*QSRILV
Trigger: CACAAGGATCCGGCTCTGCAACTCTCCCAGCCCCCA...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGTCAGGAATGCCATCGTaGTCATCATCGTGGTCACAG +
Preference number: 5 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQSGMPS*SSSWSQ
Trigger: CTGTGACCACGATGATGACAACGATGGCATTCCTGA...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTCCAGTTAGGGTCATTTaGGGATGTCCCTTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSPVRVI*GCPFGV
Trigger: GACCCCAAAGGGACATCCCAAAATGACCCTAACTGG...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATTGGGGTAAAACAGTATaGAAGACCTCATGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHWGKTV*KTSWLS
Trigger: AGAAAGCCATGAGGTCTTCAATACTGTTTTACCCCA...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACCACGTGCTGCTTTCCTaGGACGGTCAGGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDHVLLS*DGQAEV
Trigger: GACCTCAGCCTGACCGTCCAAGGAAAGCAGCACGTG...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTCTTTCTTGCAGGCTTaGGTCTCCCGCGCTTCGCCT +
Preference number: 5 (lower is better)
Translates to: QGLLIGTLGPFLHMIICISFLQA*VSRASP
Trigger: AGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGA...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTAACTGGGGTGTGGGGTaGTTGCAGAGACGACTACGT +
Preference number: 5 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLNWGVG*LQRRLR
Trigger: ACGTAGTCGTCTCTGCAACAACCCCACACCCCAGTT...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTTCACCAACGCAGTCCTaGCCTCCAAACTGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGSPTQS*PPNWGV
Trigger: CACACCCCAGTTTGGAGGCAAGGACTGCGTTGGTGA...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GTCAGAAAATGTCGCTGTGAGAGTTGCGTGTGCTTCAGTGTTTTTCCCTTTGTTGCATCAGGCACTTCTTaGCACTCATCAACATCTGTG +
Preference number: 5 (lower is better)
Translates to: VRKCRCESCVCFSVFPFVASGTS*HSSTSV
Trigger: CACAGATGTTGATGAGTGCAAAGAAGTGCCTGATGC...AACAAAGGGAAAAACACTGAAGCACACGCAACTCTCACAGCGACATTTTCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTCACACCAGGTTCTCATaGGGCCAGCCATCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIHTRFS*GQPSRS
Trigger: AGACCTGGATGGCTGGCCCAATGAGAACCTGGTGTG...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGGAAAACTGCATTTTCTaGAGGCAGGTCGCACGTTCT +
Preference number: 5 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQENCIF*RQVARS
Trigger: AGAACGTGCGACCTGCCTCAAGAAAATGCAGTTTTC...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGACTCTGGAATGCGGTaGGTGCCACACACATGCATC +
Preference number: 5 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIDSGMR*VPHTCI
Trigger: GATGCATGTGTGTGGCACCAACCGCATTCCAGAGTC...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTATGTCAAACACGCTGTaGTCTCCGCCAGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLMSNTL*SPPDSG
Trigger: TCCAGAGTCTGGCGGAGACAACAGCGTGTTTGACAT...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTCCTTCTTCAAGAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGATTGGACAGTCCTGCTaGTTGCAGATCTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: FLLQEEVSVMLGSTLQGQIGQSC*LQIWFS
Trigger: AGAAAACCAGATCTGCAACAAGCAGGACTGTCCAAT...CTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTCTTGAAGAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTCACCGGTGCTCTCCATaGTGGTTGAAGCAGGCATCA +
Preference number: 5 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIHRCSP*WLKQAS
Trigger: TGATGCCTGCTTCAACCACAATGGAGAGCACCGGTG...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTAGACGGCTTGCACACCTGTTaGTTGGCCGTGGCATGTTCG +
Preference number: 5 (lower is better)
Translates to: SAYWYTWAFSSHDNLYLDGLHTC*LAVACS
Trigger: CGAACATGCCACGGCCAACAAACAGGTGTGCAAGCC...GTCTAAATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp AAACTGGAACATGCCTGGAAGAAAAGCTCCTCTTTCCAGTCACTTTTTCTGTCTTGGTCAAAATCATCTTaGCAGGCATCACCTCGACCA +
Preference number: 5 (lower is better)
Translates to: KLEHAWKKSSSFQSLFLSWSKSS*QASPRP
Trigger: TGGTCGAGGTGATGCCTGCAAAGATGATTTTGACCA...AGACAGAAAAAGTGACTGGAAAGAGGAGCTTTTCTTCCAGGCATGTTCCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GAGGAGGTATCTGTAATGCTTGGCTCAACATTGCAAGGACAGCTCCTCCCTCATATAAATGTCAACTACTaGCTCTCAAACACTTTCCGT +
Preference number: 5 (lower is better)
Translates to: EEVSVMLGSTLQGQLLPHINVNY*LSNTFR
Trigger: ACGGAAAGTGTTTGAGAGCAAGTAGTTGACATTTAT...ATGAGGGAGGAGCTGTCCTTGCAATGTTGAGCCAAGCATTACAGATACCTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS TCA 90 bp AACACTATTATGTTTTTACAAAGCAGAGTTCAATGCTGCAGCTGGTaGTGCTGGGAACTTTCTAAGACTCCCTGGTCAGAGTCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: NTIMFLQSRVQCCSW*CWELSKTPWSESWS
Trigger: TGACCAAGACTCTGACCAGGGAGTCTTAGAAAGTTCCCAGCATCACCAGCTGCAGCATTGAACTCTGCTTTGTAAAAACATAATAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484734.1
CDS-3UTR CAA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTAGCATCCACCAGGTCTaGGAACTTGTCATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGSIHQV*ELVIRH
Trigger: GTGCCTGATGACAAGTTCCAAGACCTGGTGGATGCT...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTGGCACGAGTCTGCAGTaGTCCTTGTCATCAGGAATG +
Preference number: 5 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIGTSLQ*SLSSGM
Trigger: CATTCCTGATGACAAGGACAACTGCAGACTCGTGCC...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTGAAGAACACCATTTCTaGAGAGAAGACAAACAACCC +
Preference number: 5 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPEEHHF*REDKQP
Trigger: GGGTTGTTTGTCTTCTCTCAAGAAATGGTGTTCTTC...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTCAACATGCAATCGTGTaGCCCACCCAAGGCATCATT +
Preference number: 5 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLQHAIV*PTQGII
Trigger: AATGATGCCTTGGGTGGGCAACACGATTGCATGTTG...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTCCATTCACCACGTTGTaGTCAAGGGTGAGGAGGACA +
Preference number: 5 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFPFTTL*SRVRRT
Trigger: TGTCCTCCTCACCCTTGACAACAACGTGGTGAATGG...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp ATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTACGCTTTGGCTTGCAAGTCCTTaGTCTTGTGGCCAATGTAGT +
Preference number: 5 (lower is better)
Translates to: ILQSRRLSTKMTWIVFTLWLASP*SCGQCS
Trigger: ACTACATTGGCCACAAGACAAAGGACTTGCAAGCCA...AAGCGTAAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTACAGGCATCCATCAATaGGACAGTCCTGCTTGTTGC +
Preference number: 5 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGTGIHQ*DSPACC
Trigger: GCAACAAGCAGGACTGTCCAATTGATGGATGCCTGT...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTCAGTTGTCCCGTTCATaGAGGATACCGTCTCCATCA +
Preference number: 5 (lower is better)
Translates to: QGLLIGTLGPFLHMIICIQLSRS*RIPSPS
Trigger: TGATGGAGACGGTATCCTCAATGAACGGGACAACTG...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGACAGTCCTGCTTGTaGCAGATCTGGTTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIGQSCL*QIWFSV
Trigger: AACAGAAAACCAGATCTGCAACAAGCAGGACTGTCC...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTAGTCTGCAGTTGTCCTaGTCATCAGGAATGCCATCG +
Preference number: 5 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFSLQLS*SSGMPS
Trigger: CGATGGCATTCCTGATGACAAGGACAACTGCAGACT...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CATGTAACAGTTCCTCCATATTTTCTTCATACAATCGTCTCGGGTATGCGCCCTCTGGCACCACCTTTATaGTATGTACATTCTTATAAG +
Preference number: 5 (lower is better)
Translates to: HVTVPPYFLHTIVSGMRPLAPPL*YVHSYK
Trigger: CTTATAAGAATGTACATACAATAAAGGTGGTGCCAG...AGGGCGCATACCCGAGACGATTGTATGAAGAAAATATGGAGGAACTGTTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTGCCTGAAAATGCTTTaGAGTCCACTGCTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: QGLLIGTLGPFLHMIICICLKML*SPLLRD
Trigger: ATCTCTGAGCAGTGGACTCAAAAGCATTTTCAGGCA...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTTCATTGGCCAACTCTTaGTTCTCTTCAGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: QGLLIGTLGPFLHMIICISLANS*FSSVTL
Trigger: CAAAGTGACTGAAGAGAACAAAGAGTTGGCCAATGA...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp GGTCAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGTACAACCTGATTATTaGAAGGTCAGTCTTAGGGTG +
Preference number: 5 (lower is better)
Translates to: GQYSTFIISPSKNQGLLIVQPDY*KVSLRV
Trigger: CACCCTAAGACTGACCTTCAAATAATCAGGTTGTAC...AATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAGTATTCCACATTCATAATTAGCCCATCCAAAAATCAAGGTCTGCTTATTGGTCCAGCACTTCAAACGTaGAACTCTTCTGATAATGAA +
Preference number: 5 (lower is better)
Translates to: QYSTFIISPSKNQGLLIGPALQT*NSSDNE
Trigger: TTCATTATCAGAAGAGTTCAACGTTTGAAGTGCTGG...ACCAATAAGCAGACCTTGATTTTTGGATGGGCTAATTATGAATGTGGAATACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp CAAGGTCTGCTTATTGGTACACTTGGGCCTTTTCTTCACATGATAATTTGTATTAATGCTATTTCCTTATaGGGAATACTTCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: QGLLIGTLGPFLHMIICINAISL*GILLCR
Trigger: TCTGCAGAGAAGTATTCCCAATAAGGAAATAGCATT...AATACAAATTATCATGTGAAGAAAAGGCCCAAGTGTACCAATAAGCAGACCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTTCTGGAATTTTATCATaGTCATCGTCATCATCACAG +
Preference number: 5 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFSGILS*SSSSSQ
Trigger: CTGTGATGATGACGATGACAATGATAAAATTCCAGA...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTGTTCTTGCAAGAGATTaGCTGATAAATGTCAACTAC +
Preference number: 5 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFVLARD*LINVNY
Trigger: GTAGTTGACATTTATCAGCAAATCTCTTGCAAGAAC...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS-3UTR CAA 90 bp TTTACAATCTTACAGTCACGAAGACTCTCAACAAAGATGACATGGATAGTCTTTAAATTATTTCTAGACTaGCACTGCAAAGGGCTTATG +
Preference number: 5 (lower is better)
Translates to: FTILQSRRLSTKMTWIVFKLFLD*HCKGLM
Trigger: CATAAGCCCTTTGCAGTGCAAGTCTAGAAATAATTT...AAAGACTATCCATGTCATCTTTGTTGAGAGTCTTCGTGACTGTAAGATTGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp ATCCTGTGTGTACCGGAGCGCGGCGGCCGGGAGCGGTaGCGAGGGCGGCGAGGGCTGGAGGGGCGCGGGGAA +
Preference number: 6 (lower is better)
Translates to: ILCVPERGGRER*RGRRGLEGRGE
Trigger: TTCCCCGCGCCCCTCCAGCCCTCGCCGCCCTCGCCACCGCTCCCGGCCGCCGCGCTCCGGTACACACAGGAT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp GGGCGGCGAGGGCTGGAGGGGCGCGGGGAATGCCTGTaGGTCCGGAGTAGAGGTTGCTCCTGGAGAGCGACA +
Preference number: 6 (lower is better)
Translates to: GRRGLEGRGECL*VRSRGCSWRAT
Trigger: TGTCGCTCTCCAGGAGCAACCTCTACTCCGGACGCACAGGCATTCCCCGCGCCCCTCCAGCCCTCGCCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS GCA 72 bp TGGCGAGGGCGGCGAGGGCTGGAGGGGCGCGGGGAATaGCTGTGCGTCCGGAGTAGAGGTTGCTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: WRGRRGLEGRGE*LCVRSRGCSWR
Trigger: TCTCCAGGAGCAACCTCTACTCCGGACGCACAGGCATTCCCCGCGCCCCTCCAGCCCTCGCCGCCCTCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS TCA 72 bp GCTGGGCATGGGGACAGGGCCGGGACCATCCCTCTTTaGCCCCGCGTTTGCTGTGTGTACCGGAGCGCGGCG +
Preference number: 6 (lower is better)
Translates to: AGHGDRAGTIPL*PRVCCVYRSAA
Trigger: CGCCGCGCTCCGGTACACACAGCAAACGCGGGGTCAAAGAGGGATGGTCCCGGCCCTGTCCCCATGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397591.2
CDS CAA 72 bp GGCTGGGCATGGGGACAGGGCCGGGACCATCCCTCTTaGACCCCGCGTTTGCTGTGTGTACCGGAGCGCGGC +
Preference number: 6 (lower is better)
Translates to: GWAWGQGRDHPS*TPRLLCVPERG
Trigger: GCCGCGCTCCGGTACACACAGCAAACGCGGGGTCAAAGAGGGATGGTCCCGGCCCTGTCCCCATGCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397591.2
CDS GCA 72 bp GGGCGCGGGGAATGCCTGTGCGTCCGGAGTAGAGGTTaGTCCTGGAGAGCGACAGGAGCCCTGAACTCGCAG +
Preference number: 6 (lower is better)
Translates to: GRGECLCVRSRG*SWRATGALNSQ
Trigger: CTGCGAGTTCAGGGCTCCTGTCGCTCTCCAGGAGCAACCTCTACTCCGGACGCACAGGCATTCCCCGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS TCA 72 bp CCAGTCGGCGCCCAGACCCCTTGCGGGCGGCCCCGGTaGGTTCAAAGATGTCAAACACGCTGTTGTCTCCGC +
Preference number: 6 (lower is better)
Translates to: PVGAQTPCGRPR*VQRCQTRCCLR
Trigger: GCGGAGACAACAGCGTGTTTGACATCTTTGAACTCACCGGGGCCGCCCGCAAGGGGTCTGGGCGCCGACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS TCA 72 bp GGTCCAGGGTGCCCGCCTTGCCATTGGACACCACGCTaGAGACCTGGCCAGAGTGGTCTTTCCGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: GPGCPPCHWTPR*RPGQSGLSAPG
Trigger: CCCTGGAGCGGAAAGACCACTCTGGCCAGGTCTTCAGCGTGGTGTCCAATGGCAAGGCGGGCACCCTGGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp TTGCCATTGGACACCACGCTGAAGACCTGGCCAGAGTaGTCTTTCCGCTCCAGGGCCAGCAGCGTGCCCCGG +
Preference number: 6 (lower is better)
Translates to: LPLDTTLKTWPE*SFRSRASSVPR
Trigger: CCGGGGCACGCTGCTGGCCCTGGAGCGGAAAGACCACTCTGGCCAGGTCTTCAGCGTGGTGTCCAATGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp GTGCCCGCCTTGCCATTGGACACCACGCTGAAGACCTaGCCAGAGTGGTCTTTCCGCTCCAGGGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: VPALPLDTTLKT*PEWSFRSRASS
Trigger: GCTGCTGGCCCTGGAGCGGAAAGACCACTCTGGCCAGGTCTTCAGCGTGGTGTCCAATGGCAAGGCGGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 72 bp CCTTGGACGGTCAGGCTGAGGTCCAGGGTGCCCGCCTaGCCATTGGACACCACGCTGAAGACCTGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: PWTVRLRSRVPA*PLDTTLKTWPE
Trigger: CTCTGGCCAGGTCTTCAGCGTGGTGTCCAATGGCAAGGCGGGCACCCTGGACCTCAGCCTGACCGTCCAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp GATGCCAGGCAACCAGCTGGGCAGAGCTGCTGCCCATaGTCACCCTTGCAGCGGACCTCACACTTACTGGGG +
Preference number: 6 (lower is better)
Translates to: DARQPAGQSCCP*SPLQRTSHLLG
Trigger: CCCCAGTAAGTGTGAGGTCCGCTGCAAGGGTGAGCATGGGCAGCAGCTCTGCCCAGCTGGTTGCCTGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS CCA 72 bp TCAGGAACAGGACGCCTAGTCCCCAGGCCAGCCCCATaGTGGAGCTGTTGGTGCCCAGCAGGGATCCTGTGT +
Preference number: 6 (lower is better)
Translates to: SGTGRLVPRPAP*WSCWCPAGILC
Trigger: ACACAGGATCCCTGCTGGGCACCAACAGCTCCACCATGGGGCTGGCCTGGGGACTAGGCGTCCTGTTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp GCCACAGCTCGTAGAACAGGAGGTCCACTCGGACCATaGAGACCAGCCATCGTCCGCAGAGTCGCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: ATARRTGGPLGP*RPAIVRRVAGP
Trigger: TGGCCCAGCGACTCTGCGGACGATGGCTGGTCTCCATGGTCCGAGTGGACCTCCTGTTCTACGAGCTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 72 bp ACGGTCAGGCTGAGGTCCAGGGTGCCCGCCTTGCCATaGGACACCACGCTGAAGACCTGGCCAGAGTGGTCT +
Preference number: 6 (lower is better)
Translates to: TVRLRSRVPALP*DTTLKTWPEWS
Trigger: AGACCACTCTGGCCAGGTCTTCAGCGTGGTGTCCAATGGCAAGGCGGGCACCCTGGACCTCAGCCTGACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 72 bp CAACCAGCTGGGCAGAGCTGCTGCCCATGCTCACCCTaGCAGCGGACCTCACACTTACTGGGGCAGGCGTCT +
Preference number: 6 (lower is better)
Translates to: QPAGQSCCPCSP*QRTSHLLGQAS
Trigger: AGACGCCTGCCCCAGTAAGTGTGAGGTCCGCTGCAAGGGTGAGCATGGGCAGCAGCTCTGCCCAGCTGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS CAA 90 bp TTTCCTTGGACGGTCAGGCTGAGGTCCAGGGTGCCCGCCTTGCCATaGGACACCACGCTGAAGACCTGGCCAGAGTGGTCTTTCCGCTCC +
Preference number: 6 (lower is better)
Translates to: FPWTVRLRSRVPALP*DTTLKTWPEWSFRS
Trigger: GGAGCGGAAAGACCACTCTGGCCAGGTCTTCAGCGTGGTGTCCAATGGCAAGGCGGGCACCCTGGACCTCAGCCTGACCGTCCAAGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 90 bp GATGCCAGGCAACCAGCTGGGCAGAGCTGCTGCCCATGCTCACCCTaGCAGCGGACCTCACACTTACTGGGGCAGGCGTCTTTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: DARQPAGQSCCPCSP*QRTSHLLGQASFLQ
Trigger: CTGCAAGAAAGACGCCTGCCCCAGTAAGTGTGAGGTCCGCTGCAAGGGTGAGCATGGGCAGCAGCTCTGCCCAGCTGGTTGCCTGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS TCA 72 bp TCCGTGTCTGGACCGAGGAGCCCTCACATCGGTTGTTaGGGCTATCGCAGGAGCGGCCGCGCTGCTGAATTC +
Preference number: 6 (lower is better)
Translates to: SVSGPRSPHIGC*GYRRSGRAAEF
Trigger: GAATTCAGCAGCGCGGCCGCTCCTGCGATAGCCTCAACAACCGATGTGAGGGCTCCTCGGTCCAGACACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp CCGCCAGACTCTGGAATGCGGTTGGTGCCACACACATaGATCAGGAACAGGACGCCTAGTCCCCAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PPDSGMRLVPHT*IRNRTPSPQAS
Trigger: GCTGGCCTGGGGACTAGGCGTCCTGTTCCTGATGCATGTGTGTGGCACCAACCGCATTCCAGAGTCTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS GCA 72 bp AACCAGCTGGGCAGAGCTGCTGCCCATGCTCACCCTTaGAGCGGACCTCACACTTACTGGGGCAGGCGTCTT +
Preference number: 6 (lower is better)
Translates to: NQLGRAAAHAHP*SGPHTYWGRRL
Trigger: AAGACGCCTGCCCCAGTAAGTGTGAGGTCCGCTGCAAGGGTGAGCATGGGCAGCAGCTCTGCCCAGCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS CAA 72 bp GGACCCCAGCCTCCATTGATGGGGCAGGCGTCTTTCTaGCAGGCTTTGGTCTCCCGCGCTTCGCCTTCACAG +
Preference number: 6 (lower is better)
Translates to: GPQPPLMGQASF*QALVSRASPSQ
Trigger: CTGTGAAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCCCATCAATGGAGGCTGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000497720.1
CDS CAA 90 bp TGCTGCTTTCCTTGGACGGTCAGGCTGAGGTCCAGGGTGCCCGCCTaGCCATTGGACACCACGCTGAAGACCTGGCCAGAGTGGTCTTTC +
Preference number: 6 (lower is better)
Translates to: CCFPWTVRLRSRVPA*PLDTTLKTWPEWSF
Trigger: GAAAGACCACTCTGGCCAGGTCTTCAGCGTGGTGTCCAATGGCAAGGCGGGCACCCTGGACCTCAGCCTGACCGTCCAAGGAAAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 90 bp GGACCCCAGCCTCCATTGATGGGGCAGGCGTCTTTCTTGCAGGCTTaGGTCTCCCGCGCTTCGCCTTCACAGGGTTTCCCGTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: GPQPPLMGQASFLQA*VSRASPSQGFPFIW
Trigger: CCAGATGAACGGGAAACCCTGTGAAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCCCATCAATGGAGGCTGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000497720.1
CDS TCA 72 bp TGTCCTGCAGCGTGGTCACAATGGTGCGCAGGCCCCTaGGTTCCAGGACCATGCTGGACAGCTCATCACAGG +
Preference number: 6 (lower is better)
Translates to: CPAAWSQWCAGP*VPGPCWTAHHR
Trigger: CCTGTGATGAGCTGTCCAGCATGGTCCTGGAACTCAGGGGCCTGCGCACCATTGTGACCACGCTGCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp CCGGTTGCCAGGAGAGCTTCTTCCACAGACACCACGTaGTGCTTTCCTTGGACGGTCAGGCTGAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: PVARRASSTDTT*CFPWTVRLRSR
Trigger: CCTGGACCTCAGCCTGACCGTCCAAGGAAAGCAGCACGTGGTGTCTGTGGAAGAAGCTCTCCTGGCAACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp AGCGGACCTCACACTTACTGGGGCAGGCGTCTTTCTTaGAGGCTTTGGTCTCCCGCGCTTCGCCTTCACAGG +
Preference number: 6 (lower is better)
Translates to: SGPHTYWGRRLS*RLWSPALRLHR
Trigger: CCTGTGAAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCCCAGTAAGTGTGAGGTCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS CAA 72 bp CCTCCATTGATGGGGCAGGCGTCTTTCTTGCAGGCTTaGGTCTCCCGCGCTTCGCCTTCACAGGGTTTCCCG +
Preference number: 6 (lower is better)
Translates to: PPLMGQASFLQA*VSRASPSQGFP
Trigger: CGGGAAACCCTGTGAAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCCCATCAATGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000497720.1
CDS CAA 90 bp CAGCGGACCTCACACTTACTGGGGCAGGCGTCTTTCTTGCAGGCTTaGGTCTCCCGCGCTTCGCCTTCACAGGGTTTCCCGTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: QRTSHLLGQASFLQA*VSRASPSQGFPFIW
Trigger: CCAGATGAACGGGAAACCCTGTGAAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCCCAGTAAGTGTGAGGTCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS TCA 72 bp CGATGCGGAGTCTGGCGATGCTGGCCAGGTCTCTGGTaGAGACGCTTTGGATGGGGACGTCCAACTCAGCAT +
Preference number: 6 (lower is better)
Translates to: RCGVWRCWPGLW*RRFGWGRPTQH
Trigger: ATGCTGAGTTGGACGTCCCCATCCAAAGCGTCTTCACCAGAGACCTGGCCAGCATCGCCAGACTCCGCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS TCA 72 bp CGGTTGTTGAGGCTATCGCAGGAGCGGCCGCGCTGCTaGATTCCATTGCCACAGCTCGTAGAACAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: RLLRLSQERPRC*IPLPQLVEQEV
Trigger: GACCTCCTGTTCTACGAGCTGTGGCAATGGAATTCAGCAGCGCGGCCGCTCCTGCGATAGCCTCAACAACCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp TCCAGGGCCAGCAGCGTGCCCCGGGTCTTCTTCATCTaGCTCAGGGATGCCAGAAGGAGGAAACCCTTTTCT +
Preference number: 6 (lower is better)
Translates to: SRASSVPRVFFI*LRDARRRKPFS
Trigger: AGAAAAGGGTTTCCTCCTTCTGGCATCCCTGAGGCAGATGAAGAAGACCCGGGGCACGCTGCTGGCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp GTTGCCAGGAGAGCTTCTTCCACAGACACCACGTGCTaGTTTCCTTGGACGGTCAGGCTGAGGTCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: VARRASSTDTTC*FPWTVRLRSRV
Trigger: CACCCTGGACCTCAGCCTGACCGTCCAAGGAAAGCAGCACGTGGTGTCTGTGGAAGAAGCTCTCCTGGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp CAGGCATCACCTCGACCATCGCCGTCAGAGTCCTTCTaGTCGGGATTGGGCACGAGTCTGCAGTTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: QASPRPSPSESF*SGLGTSLQLSL
Trigger: CAAGGACAACTGCAGACTCGTGCCCAATCCCGACCAGAAGGACTCTGACGGCGATGGTCGAGGTGATGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp CACACTTACTGGGGCAGGCGTCTTTCTTGCAGGCTTTaGTCTCCCGCGCTTCGCCTTCACAGGGTTTCCCGT +
Preference number: 6 (lower is better)
Translates to: HTYWGRRLSCRL*SPALRLHRVSR
Trigger: ACGGGAAACCCTGTGAAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCCCAGTAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS CAA 72 bp TCACACTTACTGGGGCAGGCGTCTTTCTTGCAGGCTTaGGTCTCCCGCGCTTCGCCTTCACAGGGTTTCCCG +
Preference number: 6 (lower is better)
Translates to: SHLLGQASFLQA*VSRASPSQGFP
Trigger: CGGGAAACCCTGTGAAGGCGAAGCGCGGGAGACCAAAGCCTGCAAGAAAGACGCCTGCCCCAGTAAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS GCA 72 bp CGCTGTTGTCTCCGCCAGACTCTGGAATGCGGTTGGTaGCACACACATGCATCAGGAACAGGACGCCTAGTC +
Preference number: 6 (lower is better)
Translates to: RCCLRQTLECGW*HTHASGTGRLV
Trigger: GACTAGGCGTCCTGTTCCTGATGCATGTGTGTGGCACCAACCGCATTCCAGAGTCTGGCGGAGACAACAGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS GCA 72 bp CTGCACAAACAGGGTGATGCTCTTCCACTGGCCGGTTaGCAGGAGAGCTTCTTCCACAGACACCACGTGCTG +
Preference number: 6 (lower is better)
Translates to: LHKQGDALPLAG*QESFFHRHHVL
Trigger: CAGCACGTGGTGTCTGTGGAAGAAGCTCTCCTGGCAACCGGCCAGTGGAAGAGCATCACCCTGTTTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp ACTTGGCGTTCTTGTTGCAGTCGTGGGTCCCATCCGTaGAGGGGTTACGGGGCTTGCACACCTGTTTGTTGG +
Preference number: 6 (lower is better)
Translates to: TWRSCCSRGSHP*RGYGACTPVCW
Trigger: CCAACAAACAGGTGTGCAAGCCCCGTAACCCCTGCACGGATGGGACCCACGACTGCAACAAGAACGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 72 bp GCGGCCCCGGTGAGTTCAAAGATGTCAAACACGCTGTaGTCTCCGCCAGACTCTGGAATGCGGTTGGTGCCA +
Preference number: 6 (lower is better)
Translates to: AAPVSSKMSNTL*SPPDSGMRLVP
Trigger: TGGCACCAACCGCATTCCAGAGTCTGGCGGAGACAACAGCGTGTTTGACATCTTTGAACTCACCGGGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000397591.2
CDS GCA 72 bp CTGCCTCAGGGATGCCAGAAGGAGGAAACCCTTTTCTaGCCGCACAGCATCCACCAGGTCTTGGAACTTGTC +
Preference number: 6 (lower is better)
Translates to: LPQGCQKEETLF*PHSIHQVLELV
Trigger: GACAAGTTCCAAGACCTGGTGGATGCTGTGCGGGCAGAAAAGGGTTTCCTCCTTCTGGCATCCCTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp CAGGCACCCATAAGCTCTCTCTCTGTTCCAGGGCTTTaGTTCTTACCTGGCCAGGGGTGTTTCCTGTGTGCC +
Preference number: 6 (lower is better)
Translates to: QAPISSLSVPGL*FLPGQGCFLCA
Trigger: GGCACACAGGAAACACCCCTGGCCAGGTAAGAAGCAAAGCCCTGGAACAGAGAGAGAGCTTATGGGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484734.1
CDS CCA 72 bp CTGTCTTCCTGCACAAACAGGGTGATGCTCTTCCACTaGCCGGTTGCCAGGAGAGCTTCTTCCACAGACACC +
Preference number: 6 (lower is better)
Translates to: LSSCTNRVMLFH*PVARRASSTDT
Trigger: GGTGTCTGTGGAAGAAGCTCTCCTGGCAACCGGCCAGTGGAAGAGCATCACCCTGTTTGTGCAGGAAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp CCGGGGTCCGTGTTCTCACACCGGTGCTCTCCATTGTaGTTGAAGCAGGCATCAGGCACTTCTTTGCACTCA +
Preference number: 6 (lower is better)
Translates to: PGSVFSHRCSPL*LKQASGTSLHS
Trigger: TGAGTGCAAAGAAGTGCCTGATGCCTGCTTCAACCACAATGGAGAGCACCGGTGTGAGAACACGGACCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000490247.1
CDS CAA 90 bp GATGCGGAGTCTGGCGATGCTGGCCAGGTCTCTGGTGAAGACGCTTaGGATGGGGACGTCCAACTCAGCATTCTCCATCTTTTCACAGTC +
Preference number: 6 (lower is better)
Translates to: DAESGDAGQVSGEDA*DGDVQLSILHLFTV
Trigger: GACTGTGAAAAGATGGAGAATGCTGAGTTGGACGTCCCCATCCAAAGCGTCTTCACCAGAGACCTGGCCAGCATCGCCAGACTCCGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 90 bp CTGGGCCAACAGCGAGGACAGCATTCTCCATCAGGAACTGTGGCATaGGAGCAGGGCATGATGGGGCAGGACACCTTTTTGCAGATGGTA +
Preference number: 6 (lower is better)
Translates to: LGQQRGQHSPSGTVA*EQGMMGQDTFLQMV
Trigger: TACCATCTGCAAAAAGGTGTCCTGCCCCATCATGCCCTGCTCCAATGCCACAGTTCCTGATGGAGAATGCTGTCCTCGCTGTTGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp GTTCCAGGACCATGCTGGACAGCTCATCACAGGAGATaGCGCAGATGGCTTGCAAGTCCTTTGTCTTGTGGC +
Preference number: 6 (lower is better)
Translates to: VPGPCWTAHHRR*RRWLASPLSCG
Trigger: GCCACAAGACAAAGGACTTGCAAGCCATCTGCGGCATCTCCTGTGATGAGCTGTCCAGCATGGTCCTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp TCTTTGTTCTCTTCAGTCACTTTGCGGATGCTGTCCTaGAGCGTGGTCACAATGGTGCGCAGGCCCCTGAGT +
Preference number: 6 (lower is better)
Translates to: SLFSSVTLRMLS*SVVTMVRRPLS
Trigger: ACTCAGGGGCCTGCGCACCATTGTGACCACGCTGCAGGACAGCATCCGCAAAGTGACTGAAGAGAACAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp CTGGCGATGCTGGCCAGGTCTCTGGTGAAGACGCTTTaGATGGGGACGTCCAACTCAGCATTCTCCATCTTT +
Preference number: 6 (lower is better)
Translates to: LAMLARSLVKTL*MGTSNSAFSIF
Trigger: AAAGATGGAGAATGCTGAGTTGGACGTCCCCATCCAAAGCGTCTTCACCAGAGACCTGGCCAGCATCGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp CATCACCAACGCAGTCCTTGCCTCCAAACTGGGGTGTaGGGTTGTTGCAGAGACGACTACGTTTCTGTACCC +
Preference number: 6 (lower is better)
Translates to: HHQRSPCLQTGV*GCCRDDYVSVP
Trigger: GGGTACAGAAACGTAGTCGTCTCTGCAACAACCCCACACCCCAGTTTGGAGGCAAGGACTGCGTTGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000497720.1
CDS CCA 72 bp GAGCAAAGCTCCTGGGTCGTTTCATCCTGGGCTGCGTaGCTCACCAATTGGACAGTCCTGCTTGTTGCAGAT +
Preference number: 6 (lower is better)
Translates to: EQSSWVVSSWAA*LTNWTVLLVAD
Trigger: ATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGACCCAGGAGCTTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS CAA 72 bp TCTGGCGATGCTGGCCAGGTCTCTGGTGAAGACGCTTaGGATGGGGACGTCCAACTCAGCATTCTCCATCTT +
Preference number: 6 (lower is better)
Translates to: SGDAGQVSGEDA*DGDVQLSILHL
Trigger: AAGATGGAGAATGCTGAGTTGGACGTCCCCATCCAAAGCGTCTTCACCAGAGACCTGGCCAGCATCGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 72 bp CATAGGGGAGGCCGCCTCAGCTCATTGGCCAACTCTTaGTTCTCTTCAGTCACTTTGCGGATGCTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: HRGGRLSSLANS*FSSVTLRMLSC
Trigger: GCAGGACAGCATCCGCAAAGTGACTGAAGAGAACAAAGAGTTGGCCAATGAGCTGAGGCGGCCTCCCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 72 bp CAGCGAGGACAGCATTCTCCATCAGGAACTGTGGCATaGGAGCAGGGCATGATGGGGCAGGACACCTTTTTG +
Preference number: 6 (lower is better)
Translates to: QRGQHSPSGTVA*EQGMMGQDTFL
Trigger: CAAAAAGGTGTCCTGCCCCATCATGCCCTGCTCCAATGCCACAGTTCCTGATGGAGAATGCTGTCCTCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp TTTTCACAGTCGATGTACAGCTGGGCCCTGTCTTCCTaGACAAACAGGGTGATGCTCTTCCACTGGCCGGTT +
Preference number: 6 (lower is better)
Translates to: FSQSMYSWALSS*TNRVMLFHWPV
Trigger: AACCGGCCAGTGGAAGAGCATCACCCTGTTTGTGCAGGAAGACAGGGCCCAGCTGTACATCGACTGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS GCA 72 bp AAAAGAGCAAAGCTCCTGGGTCGTTTCATCCTGGGCTaGGTGGCTCACCAATTGGACAGTCCTGCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: KRAKLLGRFILG*VAHQLDSPACC
Trigger: GCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGACCCAGGAGCTTTGCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS CAA 72 bp GGGTCCGTGTTCTCACACCGGTGCTCTCCATTGTGGTaGAAGCAGGCATCAGGCACTTCTTTGCACTCATCA +
Preference number: 6 (lower is better)
Translates to: GSVFSHRCSPLW*KQASGTSLHSS
Trigger: TGATGAGTGCAAAGAAGTGCCTGATGCCTGCTTCAACCACAATGGAGAGCACCGGTGTGAGAACACGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000490247.1
CDS TCA 72 bp GGTCCGTGTTCTCACACCGGTGCTCTCCATTGTGGTTaGAGCAGGCATCAGGCACTTCTTTGCACTCATCAA +
Preference number: 6 (lower is better)
Translates to: GPCSHTGALHCG*SRHQALLCTHQ
Trigger: TTGATGAGTGCAAAGAAGTGCCTGATGCCTGCTTCAACCACAATGGAGAGCACCGGTGTGAGAACACGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000490247.1
CDS CCA 72 bp CCATGCTGGACAGCTCATCACAGGAGATGCCGCAGATaGCTTGCAAGTCCTTTGTCTTGTGGCCAATGTAGT +
Preference number: 6 (lower is better)
Translates to: PCWTAHHRRCRR*LASPLSCGQCS
Trigger: ACTACATTGGCCACAAGACAAAGGACTTGCAAGCCATCTGCGGCATCTCCTGTGATGAGCTGTCCAGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp TCTGTTACATCACCAACGCAGTCCTTGCCTCCAAACTaGGGTGTGGGGTTGTTGCAGAGACGACTACGTTTC +
Preference number: 6 (lower is better)
Translates to: SVTSPTQSLPPN*GVGLLQRRLRF
Trigger: GAAACGTAGTCGTCTCTGCAACAACCCCACACCCCAGTTTGGAGGCAAGGACTGCGTTGGTGATGTAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000497720.1
CDS CCA 72 bp CCCTTCATACATCACCACTCTAATGAAACCCGTCTTTaGCCTGTGGCTGAGACGCCATCTGTAGGCGGTGAA +
Preference number: 6 (lower is better)
Translates to: PFIHHHSNETRL*PVAETPSVGGE
Trigger: TTCACCGCCTACAGATGGCGTCTCAGCCACAGGCCAAAGACGGGTTTCATTAGAGTGGTGATGTATGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000484734.1
CDS CCA 72 bp TGCTGGGAACTTTCTAAGACTCCCTGGTCAGAGTCTTaGTCAAAGCACAGCATCCCCAGTGCTAGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: CWELSKTPWSES*SKHSIPSASQA
Trigger: TGCCTGACTAGCACTGGGGATGCTGTGCTTTGACCAAGACTCTGACCAGGGAGTCTTAGAAAGTTCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484734.1
CDS CCA 72 bp TGGGTCGTTTCATCCTGGGCTGCGTGGCTCACCAATTaGACAGTCCTGCTTGTTGCAGATCTGGTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: WVVSSWAAWLTN*TVLLVADLVFC
Trigger: ACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS CAA 72 bp GGGCTGCGTGGCTCACCAATTGGACAGTCCTGCTTGTaGCAGATCTGGTTTTCTGTTACATCACCAACGCAG +
Preference number: 6 (lower is better)
Translates to: GLRGSPIGQSCL*QIWFSVTSPTQ
Trigger: CTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS CAA 72 bp CCTGGGCTGCGTGGCTCACCAATTGGACAGTCCTGCTaGTTGCAGATCTGGTTTTCTGTTACATCACCAACG +
Preference number: 6 (lower is better)
Translates to: PGLRGSPIGQSC*LQIWFSVTSPT
Trigger: CGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS CAA 90 bp GCAAAGCTCCTGGGTCGTTTCATCCTGGGCTGCGTGGCTCACCAATaGGACAGTCCTGCTTGTTGCAGATCTGGTTTTCTGTTACATCAC +
Preference number: 6 (lower is better)
Translates to: AKLLGRFILGCVAHQ*DSPACCRSGFLLHH
Trigger: GTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGACCCAGGAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS CAA 90 bp TTTCATCCTGGGCTGCGTGGCTCACCAATTGGACAGTCCTGCTTGTaGCAGATCTGGTTTTCTGTTACATCACCAACGCAGTCCTTGCCT +
Preference number: 6 (lower is better)
Translates to: FHPGLRGSPIGQSCL*QIWFSVTSPTQSLP
Trigger: AGGCAAGGACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS CAA 90 bp TCGTTTCATCCTGGGCTGCGTGGCTCACCAATTGGACAGTCCTGCTaGTTGCAGATCTGGTTTTCTGTTACATCACCAACGCAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: SFHPGLRGSPIGQSC*LQIWFSVTSPTQSL
Trigger: CAAGGACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS GCA 72 bp AGGCATCAGGCACTTCTTTGCACTCATCAACATCTGTaGACTGGATGCCATTTCCACTGTAACCAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: RHQALLCTHQHL*TGCHFHCNQGD
Trigger: GTCCCCCTGGTTACAGTGGAAATGGCATCCAGTGCACAGATGTTGATGAGTGCAAAGAAGTGCCTGATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000490247.1
CDS GCA 72 bp GGCTGCGTGGCTCACCAATTGGACAGTCCTGCTTGTTaGAGATCTGGTTTTCTGTTACATCACCAACGCAGT +
Preference number: 6 (lower is better)
Translates to: GCVAHQLDSPAC*RSGFLLHHQRS
Trigger: ACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS TCA 72 bp CTGTTTGTTTCTCTAGTAGGTAACCTTCCTGCTCTATaGCCCACTGAACTGCAGGCTGCAGATGCCAGGCAA +
Preference number: 6 (lower is better)
Translates to: LFVSLVGNLPAL*PTELQAADARQ
Trigger: TTGCCTGGCATCTGCAGCCTGCAGTTCAGTGGGTCATAGAGCAGGAAGGTTACCTACTAGAGAAACAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466755.1
CDS CCA 72 bp AGAGCTGGAGCAGCCTTTGTTCCTGAGGATGTCTTCTaGTGTGGTTCCAAAGACAAACCTCACATTCTGCAG +
Preference number: 6 (lower is better)
Translates to: RAGAAFVPEDVF*CGSKDKPHILQ
Trigger: CTGCAGAATGTGAGGTTTGTCTTTGGAACCACACCAGAAGACATCCTCAGGAACAAAGGCTGCTCCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp GGCTCACCAATTGGACAGTCCTGCTTGTTGCAGATCTaGTTTTCTGTTACATCACCAACGCAGTCCTTGCCT +
Preference number: 6 (lower is better)
Translates to: GSPIGQSCLLQI*FSVTSPTQSLP
Trigger: AGGCAAGGACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497720.1
CDS TCA 72 bp ATCCTGATTGTTGTCACAGGTATCTCCAATGCGGTCTaGGTCAGAGTCCAGCTGATCCGGATTGTGTTCCAA +
Preference number: 6 (lower is better)
Translates to: ILIVVTGISNAV*VRVQLIRIVFQ
Trigger: TTGGAACACAATCCGGATCAGCTGGACTCTGACTCAGACCGCATTGGAGATACCTGTGACAACAATCAGGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS TCA 72 bp GGATCACAGTTGACAGTCTGGACGAGTTCTTTACCCTaGTGGCGTACAACCCAGTTAGGGTCATTTTGGGAT +
Preference number: 6 (lower is better)
Translates to: GSQLTVWTSSLP*WRTTQLGSFWD
Trigger: ATCCCAAAATGACCCTAACTGGGTTGTACGCCATCAGGGTAAAGAACTCGTCCAGACTGTCAACTGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000484734.1
CDS TCA 72 bp GAGGAATCATCTGGAATCGGCGGAAATCGGTCTCACTaGTGTCAACATTCTCAGGACAGATGTCATCGATGT +
Preference number: 6 (lower is better)
Translates to: EESSGIGGNRSH*CQHSQDRCHRC
Trigger: ACATCGATGACATCTGTCCTGAGAATGTTGACATCAGTGAGACCGATTTCCGCCGATTCCAGATGATTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260356.6
ENST00000484734.1
CDS GCA 72 bp TGGACAGGCATCCATCAATTGGACAGTCCTGCTTGTTaGAGATCTGGTTTTCTGTTACATCACCAACGCAGT +
Preference number: 6 (lower is better)
Translates to: WTGIHQLDSPAC*RSGFLLHHQRS
Trigger: ACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGATGGATGCCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp CATCCATCAATTGGACAGTCCTGCTTGTTGCAGATCTaGTTTTCTGTTACATCACCAACGCAGTCCTTGCCT +
Preference number: 6 (lower is better)
Translates to: HPSIGQSCLLQI*FSVTSPTQSLP
Trigger: AGGCAAGGACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGATGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CCA 72 bp GTCTCCCACATCATCTCTGTCATAGTCATACTGAGCTaGGTTGTAATGGAATGGACAGTTGTCCCTGTCATC +
Preference number: 6 (lower is better)
Translates to: VSHIISVIVILS*VVMEWTVVPVI
Trigger: GATGACAGGGACAACTGTCCATTCCATTACAACCCAGCTCAGTATGACTATGACAGAGATGATGTGGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 72 bp TTGGACAGGCATCCATCAATTGGACAGTCCTGCTTGTaGCAGATCTGGTTTTCTGTTACATCACCAACGCAG +
Preference number: 6 (lower is better)
Translates to: LDRHPSIGQSCL*QIWFSVTSPTQ
Trigger: CTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGATGGATGCCTGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 72 bp GGATTGGACAGGCATCCATCAATTGGACAGTCCTGCTaGTTGCAGATCTGGTTTTCTGTTACATCACCAACG +
Preference number: 6 (lower is better)
Translates to: GLDRHPSIGQSC*LQIWFSVTSPT
Trigger: CGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGATGGATGCCTGTCCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260356.6
CDS CAA 90 bp TTAGAGGGCTGCAATGGGGAATTTTTCCAAGTCCTCTCATATTTGTaGTGTGCCACTGAGCACACATATAAAGCAGACAGAGAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LEGCNGEFFQVLSYL*CATEHTYKADREEG
Trigger: TCCCTCCTCTCTGTCTGCTTTATATGTGTGCTCAGTGGCACACAACAAATATGAGAGGACTTGGAAAAATTCCCCATTGCAGCCCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484734.1
CDS TCA 72 bp ATGTTTTTACAAAGCAGAGTTCAATGCTGCAGCTGGTaGTGCTGGGAACTTTCTAAGACTCCCTGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: MFLQSRVQCCSW*CWELSKTPWSE
Trigger: CTCTGACCAGGGAGTCTTAGAAAGTTCCCAGCATCACCAGCTGCAGCATTGAACTCTGCTTTGTAAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484734.1
CDS CCA 72 bp GTCTCCCACATCATCTCTGTCATAGTCATACTGAGCTaGGTTGTAATGGAATGGACAGTTGTCCTGCAAAGA +
Preference number: 6 (lower is better)
Translates to: VSHIISVIVILS*VVMEWTVVLQR
Trigger: TCTTTGCAGGACAACTGTCCATTCCATTACAACCCAGCTCAGTATGACTATGACAGAGATGATGTGGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560894.1
CDS CAA 90 bp AAGTTAGAGGGCTGCAATGGGGAATTTTTCCAAGTCCTCTCATATTaGTTGTGTGCCACTGAGCACACATATAAAGCAGACAGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: KLEGCNGEFFQVLSY*LCATEHTYKADREE
Trigger: CTCCTCTCTGTCTGCTTTATATGTGTGCTCAGTGGCACACAACAAATATGAGAGGACTTGGAAAAATTCCCCATTGCAGCCCTCTAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484734.1
CDS TCA 72 bp TCTACCACCAGCATAGGTTTTATCATAGATGGGTCCTaGGTCAGCCATGATTTTCTTCCCTTCATACATCAC +
Preference number: 6 (lower is better)
Translates to: STTSIGFIIDGS*VSHDFLPFIHH
Trigger: GTGATGTATGAAGGGAAGAAAATCATGGCTGACTCAGGACCCATCTATGATAAAACCTATGCTGGTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260356.6
ENST00000484734.1
ENST00000559746.1
CDS CAA 90 bp TGGACAGTTGTCCTGCAAAGAGAAGAAATGGAGCACTTAACAATGTaGTCCTTGAAAACAGCTCAAGCCTCAAACCATGTGCATAATATG +
Preference number: 6 (lower is better)
Translates to: WTVVLQREEMEHLTM*SLKTAQASNHVHNM
Trigger: CATATTATGCACATGGTTTGAGGCTTGAGCTGTTTTCAAGGACAACATTGTTAAGTGCTCCATTTCTTCTCTTTGCAGGACAACTGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560894.1