Pregenerated sensors for THAP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000173451Ensembl transcript IDs: ENST00000308086.3, ENST00000547843.1, ENST00000551238.1, ENST00000551488.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTaGTGCCCAGTAGACAGAGAACAAATGAACAGAAGATCTGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: FLYQVPSLWLVLCRG*CPVDREQMNRRSVL Trigger: CAACACAGATCTTCTGTTCATTTGTTCTCTGTCTACTGGGCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCCCTCCTAGGTTCAATTaGTCTTCCCACCTTAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCPPRFN*SSHLSL Trigger: GAGGCTAAGGTGGGAAGATCAATTGAACCTAGGAGG...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATAGCCTCCCAAGTAGCTaGGAACACAGGCATGCTAGT | + |
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Preference number: 2 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYSLPSS*EHRHAS Trigger: ACTAGCATGCCTGTGTTCCCAGCTACTTGGGAGGCT...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCGTTTTGTATCTGGGGTaGAGGGTGAACCACATGACA | + |
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Preference number: 2 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCVLYLG*RVNHMT Trigger: TGTCATGTGGTTCACCCTTCACCCCAGATACAAAAC...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGCACTTGCAGAGAAGGTAAACATTTACAGAGTACCTGTTATTTTCCAGGCACATGGCTATCAAAGATaGCTCAATTCCTCCGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: QALAEKVNIYRVPVIFQAHGYQR*LNSSAE Trigger: TTCTGCGGAGGAATTGAGTCATCTTTGATAGCCATG...TGCCTGGAAAATAACAGGTACTCTGTAAATGTTTACCTTCTCTGCAAGTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCAGGCCTTACCTAGTTTaGATGACTCAATGGTACTTC | + |
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Preference number: 2 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCRPYLV*MTQWYF Trigger: GAAGTACCATTGAGTCATCCAAACTAGGTAAGGCCT...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCTTCAACAAAGCTGTTTaGAGCAAAGGGTTCCTATTA | + |
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Preference number: 2 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCFNKAV*SKGFLL Trigger: TAATAGGAACCCTTTGCTTCAAACAGCTTTGTTGAA...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATACCTTTGCATTTCCTTaGGAGGCATTCCTTAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYTFAFP*EAFLSK Trigger: TTTACTAAGGAATGCCTCCCAAGGAAATGCAAAGGT...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAGTTCTTTGTAGAGGTTaGTGCCCAGTAGACAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TKDNVNSREDLLAENLCSVLCRG*CPVDRE Trigger: TTCTCTGTCTACTGGGCACCAACCTCTACAAAGAAC...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGCACTTGCAGAGAAGGTAAACATTTACAGAGTACCTGTTATTTTCCAGGCACATCGCTTAATTCCATaGCTATCAAAGATGACTCAA | + |
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Preference number: 2 (lower is better) Translates to: QALAEKVNIYRVPVIFQAHRLIP*LSKMTQ Trigger: TTGAGTCATCTTTGATAGCCATGGAATTAAGCGATG...TGCCTGGAAAATAACAGGTACTCTGTAAATGTTTACCTTCTCTGCAAGTGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAATTCCTTTTGCAAGTTaGCACACAGTAAATGCCCGA | + |
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Preference number: 2 (lower is better) Translates to: TKDNVNSREDLLAENLCSIPFAS*HTVNAR Trigger: TCGGGCATTTACTGTGTGCCAACTTGCAAAAGGAAT...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCACACAGGCATGCTAGTTaGTCTATTTCACTCACTAAA | + |
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Preference number: 2 (lower is better) Translates to: TKDNVNSREDLLAENLCSHRHAS*SISLTK Trigger: TTTAGTGAGTGAAATAGAGCAACTAGCATGCCTGTG...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCACATTTCTATTCCTTTTaGAAGTTGGCACACAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: TKDNVNSREDLLAENLCSHFYSF*KLAHSK Trigger: TTTACTGTGTGCCAACTTGCAAAAGGAATAGAAATG...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR GCA 72 bp | GTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTaGCCAGTAGACAGAGAACAAATGAACAGAAGATCT | + |
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Preference number: 3 (lower is better) Translates to: VPSLWLVLCRGW*PVDREQMNRRS Trigger: AGATCTTCTGTTCATTTGTTCTCTGTCTACTGGGCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR CCA 72 bp | CAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTaGTGCCCAGTAGACAGAGAACAAATGAACAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: QVPSLWLVLCRG*CPVDREQMNRR Trigger: TCTTCTGTTCATTTGTTCTCTGTCTACTGGGCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR CAA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCACTAGTTTAAAGTACTaGAGGCCTTACCTAGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCTSLKY*RPYLVW Trigger: CCAAACTAGGTAAGGCCTCAAGTACTTTAAACTAGT...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAGAGGCCTTACCTAGTTaGGATGACTCAATGGTACTT | + |
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Preference number: 3 (lower is better) Translates to: TKDNVNSREDLLAENLCSEALPS*DDSMVL Trigger: AAGTACCATTGAGTCATCCAAACTAGGTAAGGCCTC...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR CAA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCCCTTATGCACTATGGTaGCTTTATTTTTGTTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCPYALW*LYFCCC Trigger: GCAACAACAAAAATAAAGCAACCATAGTGCATAAGG...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAAGACTTTTCCTACCTTaGCATTTCCTTGGGAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TKDNVNSREDLLAENLCSRLFLP*HFLGRH Trigger: ATGCCTCCCAAGGAAATGCAAAGGTAGGAAAAGTCT...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCATATTCCTTTTGCAAGTaGGCACACAGTAAATGCCCG | + |
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Preference number: 3 (lower is better) Translates to: TKDNVNSREDLLAENLCSYSFCK*AHSKCP Trigger: CGGGCATTTACTGTGTGCCAACTTGCAAAAGGAATA...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCGAAGGGGTGTGTATGTaGGGGCGGAGGCGAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCEGVCM*GRRRRT Trigger: CGTCCTTCGCCTCCGCCCCCACATACACACCCCTTC...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCGTCGTGAGAGCGGAGTaGGAAGAAGGGGTGTGTATG | + |
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Preference number: 4 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCVVRAE*EEGVCM Trigger: CATACACACCCCTTCTTCCCACTCCGCTCTCACGAC...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATTCTTCTGGCAGAGGCTaGACAATCGAGGCAGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYSSGRG*TIEAGV Trigger: CACGCCTGCCTCGATTGTCCAGCCTCTGCCAGAAGA...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | AACTTTTTAATGTGTCTTTTCTTCGGGCACGTGGCAGGCACTTGCAGAGAAGGTTCAAGGCCCGGTCTGTaGAAGCTGATGTTAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: NFLMCLFFGHVAGTCREGSRPGL*KLMLMC Trigger: GCACATTAACATCAGCTTCCACAGACCGGGCCTTGA...ACCTTCTCTGCAAGTGCCTGCCACGTGCCCGAAGAAAAGACACATTAAAAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR CCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCACCGCCGCAGCGCAATTaGTCGGCATTTCCCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSPPQRN*SAFPFP Trigger: GGGAAAGGGAAATGCCGACCAATTGCGCTGCGGCGG...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR TCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCCCAAACACGTGGCTTTaGTCCATCTTCGAGTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCPNTWL*SIFELL Trigger: GAGCAACTCGAAGATGGATCAAAGCCACGTGTTTGG...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATTCTCTACTGAGGCGCTaGCTGCTAAGCTTTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYSLLRR*LLSFLL Trigger: CAGAAGAAAGCTTAGCAGCCAGCGCCTCAGTAGAGA...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR TCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATGTTTTGTATCTGGGGTaGAGGGTGAACCACATGACA | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYVLYLG*RVNHMT Trigger: TGTCATGTGGTTCACCCTTCACCCCAGATACAAAAC...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCTACCTAGCCTTTGGCTaGTTCTTTGTAGAGGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCYLAFG*FFVEVG Trigger: ACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTA...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | GTGGCAGGCACTTGCAGAGAAGGTAAACATTTACAGAGTACCTGTTATTTTCCAACGGTGATTGCTGATTaGGAAGATCTCTTTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: VAGTCREGKHLQSTCYFPTVIAD*EDLFLP Trigger: AGGGAGAAAGAGATCTTCCCAATCAGCAATCACCGT...TGGAAAATAACAGGTACTCTGTAAATGTTTACCTTCTCTGCAAGTGCCTGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR TCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCACCTCCTAGGTTCAATTaGTCTTCCCACCTTAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSPPRFN*SSHLSL Trigger: GAGGCTAAGGTGGGAAGATCAATTGAACCTAGGAGG...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCACAATCGAGGCAGGCGTaGCTTAATCGTGAGAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSQSRQA*LNRESL Trigger: TAAGCTCTCACGATTAAGGCACGCCTGCCTCGATTG...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCTCCAAAGGAAACCTGTaGAAGCTGATGTTAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCSKGNL*KLMLMC Trigger: GCACATTAACATCAGCTTCCACAGGTTTCCTTTGGA...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATGTTCTTTGTAGAGGTTaGTGCCCAGTAGACAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYVLCRG*CPVDRE Trigger: TTCTCTGTCTACTGGGCACCAACCTCTACAAAGAAC...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATCAAGTACCTAGCCTTTaGCTGGTTCTTTGTAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYQVPSL*LVLCRG Trigger: ACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTG...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ATTTACAGAGTACCTGTTATTTTCCAGGCATTGTTCAAAGTGCTTTCAAGAGTTTTTTCTTCGGGCACGTaGCAGGCACTTGCAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: IYRVPVIFQALFKVLSRVFSSGT*QALAEK Trigger: CTTCTCTGCAAGTGCCTGCCACGTGCCCGAAGAAAA...AACTCTTGAAAGCACTTTGAACAATGCCTGGAAAATAACAGGTACTCTGTAAAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR TCA 90 bp | GTGGCAGGCACTTGCAGAGAAGGTAAACATTTACAGAGTACCTGTTATTTTCCATTTTACGGTGATTGCTaGTTGGGAAGATCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VAGTCREGKHLQSTCYFPFYGDC*LGRSLS Trigger: AGAAAGAGATCTTCCCAATCAGCAATCACCGTAAAA...TGGAAAATAACAGGTACTCTGTAAATGTTTACCTTCTCTGCAAGTGCCTGCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR CCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATTTGATGCAAAGAGTTTaGAGCATGTTGTCAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYLMQRV*SMLSGQ Trigger: CTGTCCTGACAACATGCTCCAAACTCTTTGCATCAA...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR TCA 90 bp | ATTTACAGAGTACCTGTTATTTTCCAGGCATTGTTCAAAGTGCTTTCAAGAGTTAGCAGGCTTTTACGGTaGTTGCTGATTGGGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: IYRVPVIFQALFKVLSRVSRLLR*LLIGKI Trigger: GATCTTCCCAATCAGCAATCACCGTAAAAGCCTGCT...AACTCTTGAAAGCACTTTGAACAATGCCTGGAAAATAACAGGTACTCTGTAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR GCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATCAGGAGGCTTCAAAGTaGTTTGAACAAAGAAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYQEASK*FEQRKV Trigger: CACTTTTCTTTGTTCAAAGCACTTTGAAGCCTCCTG...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAATCTTCGAGTTGCTCTaGGTTCCTTTTGTAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSIFELL*VPFVGK Trigger: CTTGCCTACAAAAGGAACGCAGAGCAACTCGAAGAT...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR GCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATCACAGGCATGCTAGTTaGTCTATTTCACTCACTAAA | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYHRHAS*SISLTK Trigger: TTTAGTGAGTGAAATAGAGCAACTAGCATGCCTGTG...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCACTTTGTAGAGGTTGGTaGCCAGTAGACAGAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSLCRGW*PVDREQ Trigger: TTGTTCTCTGTCTACTGGGCACCAACCTCTACAAAG...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR GCA 90 bp | GTGGCAGGCACTTGCAGAGAAGGTAAACATTTACAGAGTACCTGTTATTTTCCAAGGCATTGTTCAAAGTaGTTTCAAGAGTTCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: VAGTCREGKHLQSTCYFPRHCSK*FQEFWF Trigger: AAACCAGAACTCTTGAAAGCACTTTGAACAATGCCT...TGGAAAATAACAGGTACTCTGTAAATGTTTACCTTCTCTGCAAGTGCCTGCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR GCA 90 bp | ATGGCTATCAAAGATGACTCAATTCCTCCGCAGAATTACTATGTGACTATTAGACACGTGGCAGGCACTTaGAGAGAAGGTAAACATTTA | + |
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Preference number: 4 (lower is better) Translates to: MAIKDDSIPPQNYYVTIRHVAGT*REGKHL Trigger: TAAATGTTTACCTTCTCTGCAAGTGCCTGCCACGTG...TCTAATAGTCACATAGTAATTCTGCGGAGGAATTGAGTCATCTTTGATAGCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCATTAGATGGTCCAGCTaGAGAACAACTGTTGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCIRWSS*RTTVVF Trigger: AAAAACAACAGTTGTTCTCCAGCTGGACCATCTAAT...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATAGGTATTACTGTAGATaGGAACTGGGCTACACAAAT | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYRYYCR*ELGYTN Trigger: ATTTGTGTAGCCCAGTTCCCATCTACAGTAATACCT...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | GTGGCAGGCACTTGCAGAGAAGGTAAACATTTACAGAGTACCTGTTATTTTCCACATCGCTTAATTCCATaGCTATCAAAGATGACTCAA | + |
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Preference number: 4 (lower is better) Translates to: VAGTCREGKHLQSTCYFPHRLIP*LSKMTQ Trigger: TTGAGTCATCTTTGATAGCCATGGAATTAAGCGATG...TGGAAAATAACAGGTACTCTGTAAATGTTTACCTTCTCTGCAAGTGCCTGCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR TCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATAAACAAAGGATAATGTaGACAGCAGAGAGGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYKQRIM*TAERIC Trigger: ACAAATCCTCTCTGCTGTTCACATTATCCTTTGTTT...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCACTTCCAAAGGAAGACTaGTTAAGGCAGTTGGTAACA | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSLPKED*LRQLVT Trigger: TGTTACCAACTGCCTTAAGCAGTCTTCCTTTGGAAG...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR GCA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCCATTTCTATTCCTTTTaGAAGTTGGCACACAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCHFYSF*KLAHSK Trigger: TTTACTGTGTGCCAACTTGCAAAAGGAATAGAAATG...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAAGGCCTTACCTAGTTTaGATGACTCAATGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSRPYLV*MTQWYF Trigger: GAAGTACCATTGAGTCATCCAAACTAGGTAAGGCCT...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR GCA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATAGGCATCAAGCTCTGTaGAAGCTAAATTTAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYRHQAL*KLNLNE Trigger: TTCATTTAAATTTAGCTTGCACAGAGCTTGATGCCT...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAATAATTCAGGTCAAATaGCAATGTCCTTGTACCTCC | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSIIQVK*QCPCTS Trigger: GGAGGTACAAGGACATTGGCATTTGACCTGAATTAT...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAACCTTTGCATTTCCTTaGGAGGCATTCCTTAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSTFAFP*EAFLSK Trigger: TTTACTAAGGAATGCCTCCCAAGGAAATGCAAAGGT...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAACTGTAGATGGGAACTaGGCTACACAAATAAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSTVDGN*ATQISV Trigger: AACACTTATTTGTGTAGCCCAGTTCCCATCTACAGT...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR TCA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCATTCAACAAAGCTGTTTaGAGCAAAGGGTTCCTATTA | + |
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Preference number: 4 (lower is better) Translates to: TKDNVNSREDLLAENLCSFNKAV*SKGFLL Trigger: TAATAGGAACCCTTTGCTTCAAACAGCTTTGTTGAA...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| 3UTR CAA 72 bp | TATTATCAGCTACTAGATTTTACTAGTTTAAAGTACTaGAGGCCTTACCTAGTTTGGATGACTCAATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: YYQLLDFTSLKY*RPYLVWMTQWY Trigger: GTACCATTGAGTCATCCAAACTAGGTAAGGCCTCAAGTACTTTAAACTAGTAAAATCTAGTAGCTGATAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CCA 90 bp | ATTTACAGAGTACCTGTTATTTTCCAGGCATTGTTCAAAGTGCTTTCAAGAGTTTGCTTTCAAGAGTTCTaGTTTGACAGAACTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: IYRVPVIFQALFKVLSRVCFQEF*FDRTKE Trigger: TTCTTTAGTTCTGTCAAACCAGAACTCTTGAAAGCA...AACTCTTGAAAGCACTTTGAACAATGCCTGGAAAATAACAGGTACTCTGTAAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS CCA 90 bp | GAGAGCTTAGTCGTGAGAGCGGAGTGGGAAGAAGGGGTGTGTATGTaGGGGCGGAGGCGAAGGACGGTCAGCCTTCCCTTTCTCTTTATT | + |
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Preference number: 5 (lower is better) Translates to: ESLVVRAEWEEGVCM*GRRRRTVSLPFLFI Trigger: AATAAAGAGAAAGGGAAGGCTGACCGTCCTTCGCCTCCGCCCCCACATACACACCCCTTCTTCCCACTCCGCTCTCACGACTAAGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS CCA 90 bp | TCCCTTTCCCACTCATTCAGCGCCCTTAGGTCTCTACTGAGGCGCTaGCTGCTAAGCTTTCTTCTGGCAGAGGCTGGACAATCGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SLSHSFSALRSLLRR*LLSFLLAEAGQSRQ Trigger: CTGCCTCGATTGTCCAGCCTCTGCCAGAAGAAAGCTTAGCAGCCAGCGCCTCAGTAGAGACCTAAGGGCGCTGAATGAGTGGGAAAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CAA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATCCCGCCGCAGCGCAATaGGTCGGCATTTCCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYPAAAQ*VGISLS Trigger: GGAAAGGGAAATGCCGACCAATTGCGCTGCGGCGGG...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CAA 90 bp | ATGGCTATCAAAGATGACTCAATTCCTCCGCAGAATTACTATGTGACTATTAGACCCGCCGCAGCGCAATaGGTCGGCATTTCCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: MAIKDDSIPPQNYYVTIRPAAAQ*VGISLS Trigger: GGAAAGGGAAATGCCGACCAATTGCGCTGCGGCGGG...TCTAATAGTCACATAGTAATTCTGCGGAGGAATTGAGTCATCTTTGATAGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR CAA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCCCTGGCACAAAATTTTaGCGCCTAACCAGGCGAACC | + |
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Preference number: 5 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCPGTKF*RLTRRT Trigger: GGTTCGCCTGGTTAGGCGCAAAAATTTTGTGCCAGG...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS TCA 90 bp | TTTCCTAATTTTAACGGGAACACAGCAGGCTTTTACGGTGATTGCTaGTTGGGAAGATCTCTTTCTCCCTTACGGCGTCATTCATGTCAA | + |
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Preference number: 5 (lower is better) Translates to: FPNFNGNTAGFYGDC*LGRSLSPLRRHSCQ Trigger: TTGACATGAATGACGCCGTAAGGGAGAAAGAGATCTTCCCAATCAGCAATCACCGTAAAAGCCTGCTGTGTTCCCGTTAAAATTAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS-3UTR CAA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCGACTGCTTAAGGCAGTaGGTAACATGTGTTCTGATG | + |
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Preference number: 5 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCDCLRQ*VTCVLM Trigger: CATCAGAACACATGTTACCAACTGCCTTAAGCAGTC...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CAA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATGAGGCCTTACCTAGTTaGGATGACTCAATGGTACTT | + |
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Preference number: 5 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYEALPS*DDSMVL Trigger: AAGTACCATTGAGTCATCCAAACTAGGTAAGGCCTC...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CAA 90 bp | TCCTTTTTATATCAAGTACCTAGCCTTTGGCTGGTTCTTTGTAGAGGTTGGTGCTTTGATGCAAAGAGTTaGGAGCATGTTGTCAGGACA | + |
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Preference number: 5 (lower is better) Translates to: SFLYQVPSLWLVLCRGWCFDAKS*EHVVRT Trigger: TGTCCTGACAACATGCTCCAAACTCTTTGCATCAAA...GCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGGTACTTGATATAAAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CAA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATTATTCCTTTTGCAAGTaGGCACACAGTAAATGCCCG | + |
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Preference number: 5 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYYSFCK*AHSKCP Trigger: CGGGCATTTACTGTGTGCCAACTTGCAAAAGGAATA...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CAA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAACCAAACACGTGGCTTaGATCCATCTTCGAGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: TKDNVNSREDLLAENLCSTKHVA*IHLRVA Trigger: AGCAACTCGAAGATGGATCAAAGCCACGTGTTTGGT...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CAA 90 bp | ACAAATAAGTGTTTTGTATCTGGGGTGAAGGGTGAACCACATGACAGTGGTTATAGCAGAGAGGATTTGTaGGCAGAAAATCTATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: TNKCFVSGVKGEPHDSGYSREDL*AENLCS Trigger: TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCT...ATAACCACTGTCATGTGGTTCACCCTTCACCCCAGATACAAAACACTTATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CAA 90 bp | CAGGCACTTGCAGAGAAGGTAAACATTTACAGAGTACCTGTTATTTTCCAGGCAGTTATTTTCCAGGCATaGTTCAAAGTGCTTTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: QALAEKVNIYRVPVIFQAVIFQA*FKVLSR Trigger: TCTTGAAAGCACTTTGAACAATGCCTGGAAAATAAC...TGCCTGGAAAATAACAGGTACTCTGTAAATGTTTACCTTCTCTGCAAGTGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS TCA 90 bp | GTAATACACTATTTGCTTCTAAATTCTTTACCAAACACGTGGCTTTaGTCCATCTTCGAGTTGCTCTGCGTTCCTTTTGTAGGCAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: VIHYLLLNSLPNTWL*SIFELLCVPFVGKF Trigger: AAACTTGCCTACAAAAGGAACGCAGAGCAACTCGAAGATGGATCAAAGCCACGTGTTTGGTAAAGAATTTAGAAGCAAATAGTGTATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308086.3 ENST00000551488.5 |
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| CDS-3UTR CAA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCAACTAGTTTAAAGTACTaGAGGCCTTACCTAGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: TKDNVNSREDLLAENLCSTSLKY*RPYLVW Trigger: CCAAACTAGGTAAGGCCTCAAGTACTTTAAACTAGT...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS-3UTR CAA 90 bp | ACAAAGGATAATGTGAACAGCAGAGAGGATTTGTTGGCAGAAAATCTATGTTCACCTTATGCACTATGGTaGCTTTATTTTTGTTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: TKDNVNSREDLLAENLCSPYALW*LYFCCC Trigger: GCAACAACAAAAATAAAGCAACCATAGTGCATAAGG...TGAACATAGATTTTCTGCCAACAAATCCTCTCTGCTGTTCACATTATCCTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS CCA 72 bp | GTCGTGAGAGCGGAGTGGGAAGAAGGGGTGTGTATGTaGGGGCGGAGGCGAAGGACGGTCAGCCTTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: VVRAEWEEGVCM*GRRRRTVSLPF Trigger: AAAGGGAAGGCTGACCGTCCTTCGCCTCCGCCCCCACATACACACCCCTTCTTCCCACTCCGCTCTCACGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS GCA 72 bp | TTTCTTCTGGCAGAGGCTGGACAATCGAGGCAGGCGTaGCTTAATCGTGAGAGCTTAGTCGTGAGAGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: FLLAEAGQSRQA*LNRESLVVRAE Trigger: CTCCGCTCTCACGACTAAGCTCTCACGATTAAGGCACGCCTGCCTCGATTGTCCAGCCTCTGCCAGAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS CCA 72 bp | CACTCATTCAGCGCCCTTAGGTCTCTACTGAGGCGCTaGCTGCTAAGCTTTCTTCTGGCAGAGGCTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: HSFSALRSLLRR*LLSFLLAEAGQ Trigger: TTGTCCAGCCTCTGCCAGAAGAAAGCTTAGCAGCCAGCGCCTCAGTAGAGACCTAAGGGCGCTGAATGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS TCA 72 bp | TTTAACGGGAACACAGCAGGCTTTTACGGTGATTGCTaGTTGGGAAGATCTCTTTCTCCCTTACGGCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: FNGNTAGFYGDC*LGRSLSPLRRH Trigger: ATGACGCCGTAAGGGAGAAAGAGATCTTCCCAATCAGCAATCACCGTAAAAGCCTGCTGTGTTCCCGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547843.1 |
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| CDS CAA 90 bp | GGTAATACACTATTTGCTTCTAAATTCTTTACCAAACACGTGGCTTaGATCCATCTTCGAGTTGCTCTGCGTTCCTTTTGTAGGCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GNTLFASKFFTKHVA*IHLRVALRSFCRQV Trigger: AACTTGCCTACAAAAGGAACGCAGAGCAACTCGAAGATGGATCAAAGCCACGTGTTTGGTAAAGAATTTAGAAGCAAATAGTGTATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308086.3 |
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| CDS TCA 72 bp | CACACAGGACCCAATCTGTCATCCTTTGGTCTCATTTaGAATGTCACATCCTTTGAAAAAGTGTTCTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: HTGPNLSSFGLI*NVTSFEKVFFD Trigger: GTCAAAGAACACTTTTTCAAAGGATGTGACATTTCAAATGAGACCAAAGGATGACAGATTGGGTCCTGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551488.5 |
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| CDS CAA 90 bp | TCCAAAGGAAACTTAAGTAGCACACAGGACCCAATCTGTCATCCTTaGGTCTCATTTGAAATGTCACATCCTTTGAAAAAGTGTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SKGNLSSTQDPICHP*VSFEMSHPLKKCSL Trigger: CAAAGAACACTTTTTCAAAGGATGTGACATTTCAAATGAGACCAAAGGATGACAGATTGGGTCCTGTGTGCTACTTAAGTTTCCTTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551488.5 |
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| CDS TCA 72 bp | CTGTTGTATCTGTATGGTGGAAATACTAAAATAGTGTaGAACTGCACATCTCTTTCCAACTCCATAATCAGT | + |
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Preference number: 6 (lower is better) Translates to: LLYLYGGNTKIV*NCTSLSNSIIS Trigger: ACTGATTATGGAGTTGGAAAGAGATGTGCAGTTTCACACTATTTTAGTATTTCCACCATACAGATACAACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551238.1 |
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