RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THAP11 (Homo sapiens)

Ensembl gene IDs: ENSG00000168286

Ensembl transcript IDs: ENST00000303596.3

Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAAGCTGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATaGCCTCCTGGGAAAATAAGTCCTAGGAGGCAGAGGCACAGATTT +
Preference number: 1 (lower is better)
Translates to: ASWISISRSSRSPCK*PPGKISPRRQRHRF
Trigger: AAATCTGTGCCTCTGCCTCCTAGGACTTATTTTCCCAGGAGGCCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR TCA 90 bp ATCCCACCTGCATCCCTAGAGGGTAAGTTTCAAGTTCAGTGGTTCTaGAGCCTCTGCTTAACCAGAATCTGCAACAATAACTGGGGAGGA +
Preference number: 1 (lower is better)
Translates to: IPPASLEGKFQVQWF*SLCLTRICNNNWGG
Trigger: TCCTCCCCAGTTATTGTTGCAGATTCTGGTTAAGCAGAGGCTTCAGAACCACTGAACTTGAAACTTACCCTCTAGGGATGCAGGTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR CCA 90 bp GAATTTGTAACCAGTAGCAAACAAAACAGGATAAACCTAAGTCCCTaGCAAGCTGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTA +
Preference number: 1 (lower is better)
Translates to: EFVTSSKQNRINLSP*QAGSPSAGHPDPLV
Trigger: TACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGCTTGCCAGGGACTTAGGTTTATCCTGTTTTGTTTGCTACTGGTTACAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR TCA 90 bp TCACAGGCTGCACCTGGGAAGGAAAAGCATGAAAAGGAGGAGAACTaGTGTTACTTGAATCTCTTATCACTACACACATTAGAGTTGTCT +
Preference number: 1 (lower is better)
Translates to: SQAAPGKEKHEKEEN*CYLNLLSLHTLELS
Trigger: AGACAACTCTAATGTGTGTAGTGATAAGAGATTCAAGTAACATCAGTTCTCCTCCTTTTCATGCTTTTCCTTCCCAGGTGCAGCCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR TCA 90 bp TACTTGAATCTCTTATCACTACACACATTAGAGTTGTCTGACTGCTaGCCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGA +
Preference number: 1 (lower is better)
Translates to: YLNLLSLHTLELSDC*PTLRYGFPKPIVPG
Trigger: TCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGGTCAGCAGTCAGACAACTCTAATGTGTGTAGTGATAAGAGATTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR TCA 90 bp CTGATGTTACTTGAATCTCTTATCACTACACACATTAGAGTTGTCTaGCTGCTGACCAACCTTAAGGTATGGTTTTCCCAAACCTATAGT +
Preference number: 1 (lower is better)
Translates to: LMLLESLITTHIRVV*LLTNLKVWFSQTYS
Trigger: ACTATAGGTTTGGGAAAACCATACCTTAAGGTTGGTCAGCAGTCAGACAACTCTAATGTGTGTAGTGATAAGAGATTCAAGTAACATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR-3UTR CCA 90 bp GGCCCCAGCTTCCACTTCAGGAGGAAACAATTGAGGATGCCAGGTCACCAGCAATGGCTGGATGGGGTCTaGGAGTCCAGCAGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: GPSFHFRRKQLRMPGHQQWLDGV*ESSRLP
Trigger: CGGCAGCCTGCTGGACTCCCAGACCCCATCCAGCCA...TTGCTGGTGACCTGGCATCCTCAATTGTTTCCTCCTGAAGTGGAAGCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR-3UTR CCA 90 bp CTGCTGACCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCTGGCCTGCGGTCCCCTaGCTGGATGGGGTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LLTNLKVWFSQTYSPWTSWPAVP*LDGVWE
Trigger: CTCCCAGACCCCATCCAGCCAGGGGACCGCAGGCCA...GGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR-3UTR CCA 90 bp CCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCCACCTGCAGAGGAGTTCAACAATaGCCTGCGGTCCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: PTLRYGFPKPIVPGHPTCRGVQQ*PAVPWL
Trigger: CAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCT...GCAGGTGGGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR-3UTR GCA 90 bp GCTGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATGGCCTCCTGGGAAGACAAAGTCATAATTaGTGGTGTCACCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AGSPSAGHPDPLVNGLLGRQSHN*WCHQGR
Trigger: TCTGCCCTGGTGACACCAGCAATTATGACTTTGTCT...TCCCAGGAGGCCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR-3UTR CCA 90 bp ATAAGTCCTAGGAGGCAGAGGCACAGATTTACCAGTCCCCATCAGAATCACAGGATCTGCAACAATAACTaGGGAGGAAGGGTAGACAAA +
Preference number: 2 (lower is better)
Translates to: ISPRRQRHRFTSPHQNHRICNNN*GGRVDK
Trigger: TTTGTCTACCCTTCCTCCCCAGTTATTGTTGCAGAT...CCTGTGATTCTGATGGGGACTGGTAAATCTGTGCCTCTGCCTCCTAGGACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR CCA 72 bp TCAACCAGTGCCCAGGAGTATAGAGGAGTTCAACAATaGCCTGCGGTCCCCTGGCTGGATGGGGTCTGGGAG +
Preference number: 3 (lower is better)
Translates to: STSAQEYRGVQQ*PAVPWLDGVWE
Trigger: CTCCCAGACCCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGCACTGGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR CCA 72 bp ATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATaGCCTCCTGGGAAAATAAGTCCTAGGAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: ISISRSSRSPCK*PPGKISPRRQR
Trigger: CCTCTGCCTCCTAGGACTTATTTTCCCAGGAGGCCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR CCA 72 bp CAAACAAAACAGGATAAACCTAAGTCCCTGGCAAGCTaGATCTCCATCAGCAGGTCATCCAGATCCCCTTGT +
Preference number: 3 (lower is better)
Translates to: QTKQDKPKSLAS*ISISRSSRSPC
Trigger: ACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGCTTGCCAGGGACTTAGGTTTATCCTGTTTTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR TCA 72 bp GCATCCCTAGAGGGTAAGTTTCAAGTTCAGTGGTTCTaGAGCCTCTGCTTAACCAGAATCTGCAACAATAAC +
Preference number: 3 (lower is better)
Translates to: ASLEGKFQVQWF*SLCLTRICNNN
Trigger: GTTATTGTTGCAGATTCTGGTTAAGCAGAGGCTTCAGAACCACTGAACTTGAAACTTACCCTCTAGGGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR TCA 72 bp CTCTTATCACTACACACATTAGAGTTGTCTGACTGCTaGCCAACCTTAAGGTATGGTTTTCCCAAACCTATA +
Preference number: 3 (lower is better)
Translates to: LLSLHTLELSDC*PTLRYGFPKPI
Trigger: TATAGGTTTGGGAAAACCATACCTTAAGGTTGGTCAGCAGTCAGACAACTCTAATGTGTGTAGTGATAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR TCA 72 bp CTTGAATCTCTTATCACTACACACATTAGAGTTGTCTaGCTGCTGACCAACCTTAAGGTATGGTTTTCCCAA +
Preference number: 3 (lower is better)
Translates to: LESLITTHIRVV*LLTNLKVWFSQ
Trigger: TTGGGAAAACCATACCTTAAGGTTGGTCAGCAGTCAGACAACTCTAATGTGTGTAGTGATAAGAGATTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
3UTR TCA 72 bp GCACCTGGGAAGGAAAAGCATGAAAAGGAGGAGAACTaGTGTTACTTGAATCTCTTATCACTACACACATTA +
Preference number: 3 (lower is better)
Translates to: APGKEKHEKEEN*CYLNLLSLHTL
Trigger: TAATGTGTGTAGTGATAAGAGATTCAAGTAACATCAGTTCTCCTCCTTTTCATGCTTTTCCTTCCCAGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp GCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGCGGCCGCCCTGGAAGTaGACGCTGCAGAGACGGTGG +
Preference number: 4 (lower is better)
Translates to: AQEYRGVQQWPAVPWLDGRPPWK*TLQRRW
Trigger: CCACCGTCTCTGCAGCGTTCACTTCCAGGGCGGCCG...CCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp AGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGGTCTGGGAGTCCAGACGCTGCAGAGACGGTaGCCTGTGGTGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RSSTMACGPLAGWGLGVQTLQRR*PVVGWK
Trigger: CTTCCAGCCCACCACAGGCCACCGTCTCTGCAGCGT...CTGGACTCCCAGACCCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGCCTACCACCACCAACTaGGGGCCCATAGGGCACTCG +
Preference number: 4 (lower is better)
Translates to: AQEYRGVQQWPAVPWLDGPTTTN*GPIGHS
Trigger: CGAGTGCCCTATGGGCCCCCAGTTGGTGGTGGTAGG...CCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp ACCAGTGCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGTGGCTGGATGGGGTCTaGGAGTCCAGCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TSAQEYRGVQQWPAVPWLWLDGV*ESSRLP
Trigger: CGGCAGCCTGCTGGACTCCCAGACCCCATCCAGCCA...CAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGCACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp AACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTGGTGTCACCAGGGCAGAGCCAGAATACGCTTCCTaGCGGCCCGCGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: NWGGRVDKVIIAGVTRAEPEYAS*RPAPRR
Trigger: GCGGCGCGGCGCGGGCCGGCAGGAAGCGTATTCTGG...CTCTGCCCTGGTGACACCAGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp TCCCTGGCAAGCTGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATGGCCGCCCGGCGCCCCGTaGCCAGAATACGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLASWISISRSSRSPCKWPPGAP*PEYASC
Trigger: GCAGGAAGCGTATTCTGGGCACGGGGCGCCGGGCGG...CCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGCTTGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp ACCAGTGCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGGGAGTCCAGCAGGCTaGCGGGGCACCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: TSAQEYRGVQQWPAVPWLGSPAG*RGTSSH
Trigger: ATGTGAACTGGTGCCCCGGCAGCCTGCTGGACTCCC...CAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGCACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGGTCTGGGAGTCCAAGAGGAGTTCAACAATaGCCTGCGGTCCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EEFNNGLRSPGWMGSGSPRGVQQ*PAVPWL
Trigger: CAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCT...TGGACTCCCAGACCCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp GAAACAATTGAGGATGCCAGGTCACCAGCAAGAGAGTCCAGCTGCCTTAAGCCTGGCCCACCGGCCTCCTaGGCTCTTCGACGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ETIEDARSPARESSCLKPGPPAS*ALRRPS
Trigger: ACTGGGCCGTCGAAGAGCGCAGGAGGCCGGTGGGCC...AGGCTTAAGGCAGCTGGACTCTCTTGCTGGTGACCTGGCATCCTCAATTGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp CCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCCACCTGCTCTTCGACGGCCCAGTaGCTACGCCGCCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PTLRYGFPKPIVPGHPTCSSTAQ*LRRRPP
Trigger: GGGCGGGCGGCGGCGTAGCCACTGGGCCGTCGAAGA...GCAGGTGGGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp GGCCCCAGCTTCCACTTCAGGAGGAAACAATTGAGGATGCCAGGTCACCAGCAACACGCGACACGTTCTTaGGCCAGAGGCGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: GPSFHFRRKQLRMPGHQQHATRS*ARGAAT
Trigger: AGTTGCGGCGCCTCTGGCTCAAGAACGTGTCGCGTG...TTGCTGGTGACCTGGCATCCTCAATTGTTTCCTCCTGAAGTGGAAGCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp TCCCTGGCAAGCTGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATGGTGGAGAAGCACCCACTaGCGCCGGCACGCGACACGT +
Preference number: 4 (lower is better)
Translates to: SLASWISISRSSRSPCKWWRSTH*RRHATR
Trigger: ACGTGTCGCGTGCCGGCGTCAGTGGGTGCTTCTCCA...CCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGCTTGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp CCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCCACCTGCGTGGTATCCCACCACTaGCGCTCGGCGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PTLRYGFPKPIVPGHPTCVVSHH*RSAQPA
Trigger: GGCCGGCTGCGCCGAGCGGCAGTGGTGGGATACCAC...GCAGGTGGGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp ACCAGTGCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGTACCGTGTAGGTCTTaGGGCCGCCCTGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: TSAQEYRGVQQWPAVPWLVPCRS*GRPGSE
Trigger: TTCACTTCCAGGGCGGCCGCAAGACCTACACGGTAC...CAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGCACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp GCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGATCCCGGAGCCTGACTaGTGTCTACAGTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: AQEYRGVQQWPAVPWLDGIPEPD*CLQWPE
Trigger: TTCAGGCCACTGTAGACAGCAGTCAGGCTCCGGGAT...CCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGGTTGTTGTAGCAGCCTaGCACGCAGCACGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: AQEYRGVQQWPAVPWLDGVVVAA*HAARKA
Trigger: GGCTTTACGTGCTGCGTGCCAGGCTGCTACAACAAC...CCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp TGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATGGCCTCCTGGGAAATGGCCTGCGGTCCCCTaGCTGGATGGGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WISISRSSRSPCKWPPGKWPAVP*LDGVWE
Trigger: CTCCCAGACCCCATCCAGCCAGGGGACCGCAGGCCA...TTTCCCAGGAGGCCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp GCTGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATGGCCTCCTGGGACTGTCTACAGTGGCCTaGAGGGTGAGAAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: AGSPSAGHPDPLVNGLLGLSTVA*RVRSTA
Trigger: GGCCGTGCTTCTCACCCTTCAGGCCACTGTAGACAG...TCCCAGGAGGCCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp GAAACAATTGAGGATGCCAGGTCACCAGCAAGAGAGTCCAGCTGCCTTAAGCCTCGGCCCCAGCGGGTCTaGGCGCTACTTTGCGCTCAT +
Preference number: 4 (lower is better)
Translates to: ETIEDARSPARESSCLKPRPQRV*ALLCAH
Trigger: ATGAGCGCAAAGTAGCGCGCAGACCCGCTGGGGCCG...AGGCTTAAGGCAGCTGGACTCTCTTGCTGGTGACCTGGCATCCTCAATTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp CAGAGTCTAAGGCCCCAGCTTCCACTTCAGGAGGAAACAATTGAGGATGCCAGGAGCGGCTGCGCCCTCTaGGGCTGCAAACTCCACTTG +
Preference number: 4 (lower is better)
Translates to: QSLRPQLPLQEETIEDARSGCAL*GCKLHL
Trigger: CAAGTGGAGTTTGCAGCCGCAGAGGGCGCAGCCGCT...CCTGGCATCCTCAATTGTTTCCTCCTGAAGTGGAAGCTGGGGCCTTAGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp CCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCCACCTGCCGCCGCGCGAGGCCTTaGGTGGTATCCCACCACTGC +
Preference number: 4 (lower is better)
Translates to: PTLRYGFPKPIVPGHPTCRRARP*VVSHHC
Trigger: GCAGTGGTGGGATACCACCCAAGGCCTCGCGCGGCG...GCAGGTGGGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp AGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGGTCTGGGAGTCCAGGCAGGTGGCGAATGCTaGCTTTCATCTCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: RSSTMACGPLAGWGLGVQAGGEC*LSSLSS
Trigger: AGATGAAAGAGATGAAAGGCAGCATTCGCCACCTGC...CTGGACTCCCAGACCCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp TCAGTACTGTCAACCAGTGCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGCAGCGGGAAGATGGTaGGGACGCGTACCGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SVLSTSAQEYRGVQQWPAAAGRW*GRVPCR
Trigger: CCTACACGGTACGCGTCCCCACCATCTTCCCGCTGC...CGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGCACTGGTTGACAGTACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp AAAGTCATAATTGCTGGTGTCACCAGGGCAGAGTCTAAGGCCCCAGCTTCCACTCTACTTTGCGCTCATTaGCGCCGCGCAGCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KVIIAGVTRAESKAPASTLLCAH*RRAAGR
Trigger: TCTTCCCGCTGCGCGGCGTCAATGAGCGCAAAGTAG...AGTGGAAGCTGGGGCCTTAGACTCTGCCCTGGTGACACCAGCAATTATGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp ATAAGTCCTAGGAGGCAGAGGCACAGATTTACCAGTCCCCATCAGAATCACAGGACGGATCCCGGAGCCTaGCTGCTGTCTACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ISPRRQRHRFTSPHQNHRTDPGA*LLSTVA
Trigger: GGCCACTGTAGACAGCAGTCAGGCTCCGGGATCCGT...CCTGTGATTCTGATGGGGACTGGTAAATCTGTGCCTCTGCCTCCTAGGACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp CTGCTGACCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCCTTCTCCAGTGGGAGTaGTGGGCGCCGGCTGTACGG +
Preference number: 4 (lower is better)
Translates to: LLTNLKVWFSQTYSPWTSLLQWE*WAPAVR
Trigger: CCGTACAGCCGGCGCCCATCACTCCCACTGGAGAAG...GGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGGTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp CCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCCACCTGCGCAGCTTGGCCTCAGTaGGACGCAGGTGGCGAATGC +
Preference number: 4 (lower is better)
Translates to: PTLRYGFPKPIVPGHPTCAAWPQ*DAGGEC
Trigger: GCATTCGCCACCTGCGTCTCACTGAGGCCAAGCTGC...GCAGGTGGGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp AAAGTCATAATTGCTGGTGTCACCAGGGCAGAGTCTAAGGCCCCAGCTTCCACTCGTGCTTCTTGCGGATaGCAGCCATGGCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KVIIAGVTRAESKAPASTRASCG*QPWQAA
Trigger: GGCTGCTTGCCATGGCTGTCATCCGCAAGAAGCACG...AGTGGAAGCTGGGGCCTTAGACTCTGCCCTGGTGACACCAGCAATTATGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp TGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATGGCCTCCTGGGAAACCTGGAAGTGAACGCTaGAGAGACGGTGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: WISISRSSRSPCKWPPGKPGSER*RDGGLW
Trigger: CCACAGGCCACCGTCTCTGCAGCGTTCACTTCCAGG...TTTCCCAGGAGGCCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp ACCAGAATCTGCAACAATAACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTGGCGGCCGCAGCGGCTaGGCCCTCTGCGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TRICNNNWGGRVDKVIIAGGRSG*ALCGCK
Trigger: TTTGCAGCCGCAGAGGGCGCAGCCGCTGCGGCCGCC...AGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTTATTGTTGCAGATTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp AAAGTCATAATTGCTGGTGTCACCAGGGCAGAGTCTAAGGCCCCAGCTTCCACTGCTGCTCATTCAGCTTaGGCAGGAGCTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: KVIIAGVTRAESKAPASTAAHSA*AGAPPP
Trigger: CGGAGGAGGAGCTCCTGCGCAAGCTGAATGAGCAGC...AGTGGAAGCTGGGGCCTTAGACTCTGCCCTGGTGACACCAGCAATTATGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp GAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGGTCTGGGAGTCCAAGACAAAGTCATAATTaGTGGTGTCACCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: EEFNNGLRSPGWMGSGSPRQSHN*WCHQGR
Trigger: TCTGCCCTGGTGACACCAGCAATTATGACTTTGTCT...TGGACTCCCAGACCCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGCAACTCAGCGTCCTTTaGAAACGTGTAGAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: AQEYRGVQQWPAVPWLDGQLSVL*KRVEVQ
Trigger: CTGCACTTCTACACGTTTCCAAAGGACGCTGAGTTG...CCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp GCTGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATGGCCTCCTGGGAGCTGCAAACTCCACTTaGACTGTGAGATCGATGGGC +
Preference number: 4 (lower is better)
Translates to: AGSPSAGHPDPLVNGLLGAANST*TVRSMG
Trigger: GCCCATCGATCTCACAGTGCAAGTGGAGTTTGCAGC...TCCCAGGAGGCCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp AACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTGGTGTCACCAGGGCAGAGAGTTCAACAATGGCCTaGGGTCCCCTGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: NWGGRVDKVIIAGVTRAESSTMA*GPLAGW
Trigger: CCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACT...CTCTGCCCTGGTGACACCAGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp AGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGATGGGGTCTGGGAGTCCAGTGCTTAACCAGAATCTaGAACAATAACTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSSTMACGPLAGWGLGVQCLTRI*NNNWGG
Trigger: TCCTCCCCAGTTATTGTTGCAGATTCTGGTTAAGCA...CTGGACTCCCAGACCCCATCCAGCCAGGGGACCGCAGGCCATTGTTGAACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp ATAAGTCCTAGGAGGCAGAGGCACAGATTTACCAGTCCCCATCAGAATCACAGGGGAGCTCCTCCTCCGTaGTGCCTGACGACAAGGAGT +
Preference number: 4 (lower is better)
Translates to: ISPRRQRHRFTSPHQNHRGAPPP*CLTTRS
Trigger: ACTCCTTGTCGTCAGGCACCACGGAGGAGGAGCTCC...CCTGTGATTCTGATGGGGACTGGTAAATCTGTGCCTCTGCCTCCTAGGACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp CCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCCACCTGCCTCCTCCGTGGTGCCTaGCGACAAGGAGTACGAATG +
Preference number: 4 (lower is better)
Translates to: PTLRYGFPKPIVPGHPTCLLRGA*RQGVRM
Trigger: CATTCGTACTCCTTGTCGTCAGGCACCACGGAGGAG...GCAGGTGGGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp CAGAGTCTAAGGCCCCAGCTTCCACTTCAGGAGGAAACAATTGAGGATGCCAGGTCAGGAGGAAACAATTaGGGATGCCAGGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: QSLRPQLPLQEETIEDARSGGNN*GCQVTS
Trigger: GCTGGTGACCTGGCATCCTCAATTGTTTCCTCCTGA...CCTGGCATCCTCAATTGTTTCCTCCTGAAGTGGAAGCTGGGGCCTTAGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp CTGCTGACCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCGCCAGGATGTCCCGCTaGTCATTCAGCTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLTNLKVWFSQTYSPWTSARMSR*SFSLRR
Trigger: CCTGCGCAAGCTGAATGAGCAGCGGGACATCCTGGC...GGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp CCTCCTGGGAAAATAAGTCCTAGGAGGCAGAGGCACAGATTTACCAGTCCCCATACTCCACTTGCACTGTaGGATCGATGGGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: PPGKISPRRQRHRFTSPHTPLAL*DRWASR
Trigger: ACGTGAAGCCCATCGATCTCACAGTGCAAGTGGAGT...ATGGGGACTGGTAAATCTGTGCCTCTGCCTCCTAGGACTTATTTTCCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp ACCAGAATCTGCAACAATAACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTGCGCGAGGCCTTGGGTaGTATCCCACCACTGCCGCT +
Preference number: 4 (lower is better)
Translates to: TRICNNNWGGRVDKVIIAARGLG*YPTTAA
Trigger: AGCGGCAGTGGTGGGATACCACCCAAGGCCTCGCGC...AGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTTATTGTTGCAGATTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp AAAGTCATAATTGCTGGTGTCACCAGGGCAGAGTCTAAGGCCCCAGCTTCCACTTCAGTGAGACGCAGGTaGCGAATGCTGCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: KVIIAGVTRAESKAPASTSVRRR*RMLPFI
Trigger: GATGAAAGGCAGCATTCGCCACCTGCGTCTCACTGA...AGTGGAAGCTGGGGCCTTAGACTCTGCCCTGGTGACACCAGCAATTATGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GAAACAATTGAGGATGCCAGGTCACCAGCAAGAGAGTCCAGCTGCCTTAAGCCTAAGTCCCTGGCAAGCTaGATCTCCATCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ETIEDARSPARESSCLKPKSLAS*ISISRS
Trigger: TGACCTGCTGATGGAGATCCAGCTTGCCAGGGACTT...AGGCTTAAGGCAGCTGGACTCTCTTGCTGGTGACCTGGCATCCTCAATTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GTAACCAGTAGCAAACAAAACAGGATAAACCTAAGTCCCTGGCAAGCTGGATCTAGAGACGGTGGCCTGTaGTGGGCTGGAAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VTSSKQNRINLSPWQAGSRDGGL*WAGRWR
Trigger: TCTCCACCTTCCAGCCCACCACAGGCCACCGTCTCT...AGATCCAGCTTGCCAGGGACTTAGGTTTATCCTGTTTTGTTTGCTACTGGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GCTGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATGGCCTCCTGGGAATAAACCTAAGTCCCTaGCAAGCTGGATCTCCATCA +
Preference number: 4 (lower is better)
Translates to: AGSPSAGHPDPLVNGLLGINLSP*QAGSPS
Trigger: TGATGGAGATCCAGCTTGCCAGGGACTTAGGTTTAT...TCCCAGGAGGCCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp GAAACAATTGAGGATGCCAGGTCACCAGCAAGAGAGTCCAGCTGCCTTAAGCCTGAGTTGTCTGACTGCTaGCCAACCTTAAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: ETIEDARSPARESSCLKPELSDC*PTLRYG
Trigger: ACCATACCTTAAGGTTGGTCAGCAGTCAGACAACTC...AGGCTTAAGGCAGCTGGACTCTCTTGCTGGTGACCTGGCATCCTCAATTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp ATAAGTCCTAGGAGGCAGAGGCACAGATTTACCAGTCCCCATCAGAATCACAGGGACGCAGGTGGCGAATaGTGCCTTTCATCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ISPRRQRHRFTSPHQNHRDAGGE*CLSSLS
Trigger: TGAAAGAGATGAAAGGCAGCATTCGCCACCTGCGTC...CCTGTGATTCTGATGGGGACTGGTAAATCTGTGCCTCTGCCTCCTAGGACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp AACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTGGTGTCACCAGGGCAGAGCAAAGTCATAATTGCTaGTGTCACCAGGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: NWGGRVDKVIIAGVTRAEQSHNC*CHQGRV
Trigger: GACTCTGCCCTGGTGACACCAGCAATTATGACTTTG...CTCTGCCCTGGTGACACCAGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp GAAACAATTGAGGATGCCAGGTCACCAGCAAGAGAGTCCAGCTGCCTTAAGCCTCACATTAGAGTTGTCTaGCTGCTGACCAACCTTAAG +
Preference number: 4 (lower is better)
Translates to: ETIEDARSPARESSCLKPHIRVV*LLTNLK
Trigger: CTTAAGGTTGGTCAGCAGTCAGACAACTCTAATGTG...AGGCTTAAGGCAGCTGGACTCTCTTGCTGGTGACCTGGCATCCTCAATTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GGAGGAGAACTGATGTTACTTGAATCTCTTATCACTACACACATTAGAGTTGTCGACGGTGGCCTGTGGTaGGCTGGAAGGTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GGELMLLESLITTHIRVVDGGLW*AGRWRS
Trigger: GCTTCTCCACCTTCCAGCCCACCACAGGCCACCGTC...GACAACTCTAATGTGTGTAGTGATAAGAGATTCAAGTAACATCAGTTCTCCTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp ATAGAATTTGTAACCAGTAGCAAACAAAACAGGATAAACCTAAGTCCCTGGCAACGCGCAGCGGGAAGATaGTGGGGACGCGTACCGTGT +
Preference number: 4 (lower is better)
Translates to: IEFVTSSKQNRINLSPWQRAAGR*WGRVPC
Trigger: ACACGGTACGCGTCCCCACCATCTTCCCGCTGCGCG...TTGCCAGGGACTTAGGTTTATCCTGTTTTGTTTGCTACTGGTTACAAATTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GGAGGAGAACTGATGTTACTTGAATCTCTTATCACTACACACATTAGAGTTGTCAGGTTCGGCTGCAGCTaGGCAGTCTGGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GGELMLLESLITTHIRVVRFGCS*AVWAVE
Trigger: CTCCACTGCCCAGACTGCCCAGCTGCAGCCGAACCT...GACAACTCTAATGTGTGTAGTGATAAGAGATTCAAGTAACATCAGTTCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp ATAGAATTTGTAACCAGTAGCAAACAAAACAGGATAAACCTAAGTCCCTGGCAACTGCGGTCCCCTGGCTaGATGGGGTCTGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: IEFVTSSKQNRINLSPWQLRSPG*MGSGSP
Trigger: TGGACTCCCAGACCCCATCCAGCCAGGGGACCGCAG...TTGCCAGGGACTTAGGTTTATCCTGTTTTGTTTGCTACTGGTTACAAATTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp TCCCTGGCAAGCTGGATCTCCATCAGCAGGTCATCCAGATCCCCTTGTAAATGGAGATCCCCTTGTAAATaGCCTCCTGGGAAAATAAGT +
Preference number: 4 (lower is better)
Translates to: SLASWISISRSSRSPCKWRSPCK*PPGKIS
Trigger: ACTTATTTTCCCAGGAGGCCATTTACAAGGGGATCT...CCATTTACAAGGGGATCTGGATGACCTGCTGATGGAGATCCAGCTTGCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp GAATTTGTAACCAGTAGCAAACAAAACAGGATAAACCTAAGTCCCTGGCAAGCTTGCGCCCTCTGCGGCTaGAAACTCCACTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: EFVTSSKQNRINLSPWQACALCG*KLHLHC
Trigger: ACAGTGCAAGTGGAGTTTGCAGCCGCAGAGGGCGCA...AGCTTGCCAGGGACTTAGGTTTATCCTGTTTTGTTTGCTACTGGTTACAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp ACAATTGAGGATGCCAGGTCACCAGCAAGAGAGTCCAGCTGCCTTAAGCCTCAGGAAAAGGAGGAGAACTaGTGTTACTTGAATCTCTTA +
Preference number: 4 (lower is better)
Translates to: TIEDARSPARESSCLKPQEKEEN*CYLNLL
Trigger: TAAGAGATTCAAGTAACATCAGTTCTCCTCCTTTTC...CTGAGGCTTAAGGCAGCTGGACTCTCTTGCTGGTGACCTGGCATCCTCAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp ACCAGAATCTGCAACAATAACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTCAAACCTATAGTCCCTaGACATCCCACCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: TRICNNNWGGRVDKVIIAQTYSP*TSHLHP
Trigger: GGGATGCAGGTGGGATGTCCAGGGACTATAGGTTTG...AGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTTATTGTTGCAGATTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR TCA 90 bp GTAACCAGTAGCAAACAAAACAGGATAAACCTAAGTCCCTGGCAAGCTGGATCTCAAGTTCAGTGGTTCTaGAGCCTCTGCTTAACCAGA +
Preference number: 4 (lower is better)
Translates to: VTSSKQNRINLSPWQAGSQVQWF*SLCLTR
Trigger: TCTGGTTAAGCAGAGGCTTCAGAACCACTGAACTTG...AGATCCAGCTTGCCAGGGACTTAGGTTTATCCTGTTTTGTTTGCTACTGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR GCA 90 bp GAATTTGTAACCAGTAGCAAACAAAACAGGATAAACCTAAGTCCCTGGCAAGCTCCAGTTCACATTCCGTaGTTCTTGCGGATGACAGCC +
Preference number: 4 (lower is better)
Translates to: EFVTSSKQNRINLSPWQAPVHIP*FLRMTA
Trigger: GGCTGTCATCCGCAAGAAGCACGGAATGTGAACTGG...AGCTTGCCAGGGACTTAGGTTTATCCTGTTTTGTTTGCTACTGGTTACAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp CTGCTGACCAACCTTAAGGTATGGTTTTCCCAAACCTATAGTCCCTGGACATCCATCTGCAACAATAACTaGGGAGGAAGGGTAGACAAA +
Preference number: 4 (lower is better)
Translates to: LLTNLKVWFSQTYSPWTSICNNN*GGRVDK
Trigger: TTTGTCTACCCTTCCTCCCCAGTTATTGTTGCAGAT...GGATGTCCAGGGACTATAGGTTTGGGAAAACCATACCTTAAGGTTGGTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp TCAGTACTGTCAACCAGTGCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGACCAACCTTAAGGTATaGTTTTCCCAAACCTATAGT +
Preference number: 4 (lower is better)
Translates to: SVLSTSAQEYRGVQQWPATNLKV*FSQTYS
Trigger: ACTATAGGTTTGGGAAAACCATACCTTAAGGTTGGT...CGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGCACTGGTTGACAGTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CCA 90 bp GGAGGAGAACTGATGTTACTTGAATCTCTTATCACTACACACATTAGAGTTGTCGACAAGGAGTACGAATaGTCGGAGCCAGTATCAGGG +
Preference number: 4 (lower is better)
Translates to: GGELMLLESLITTHIRVVDKEYE*SEPVSG
Trigger: CCCTGATACTGGCTCCGACCATTCGTACTCCTTGTC...GACAACTCTAATGTGTGTAGTGATAAGAGATTCAAGTAACATCAGTTCTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 90 bp GGGCGGCCGCGGCCCCAGCGGGTCTGCGCGCTACTTTGCGCTCATTaGCGCCGCGCAGCGGGAAGATGGTGGGGACGCGTACCGTGTAGG +
Preference number: 5 (lower is better)
Translates to: GRPRPQRVCALLCAH*RRAAGRWWGRVPCR
Trigger: CCTACACGGTACGCGTCCCCACCATCTTCCCGCTGCGCGGCGTCAATGAGCGCAAAGTAGCGCGCAGACCCGCTGGGGCCGCGGCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp TGCTGCTGCTGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTaGTGCTGCCTGCGGCGGGCGGCCGCGGCCCCAGCGGGTCTGCGC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCLRRAAAAPAGLR
Trigger: GCGCAGACCCGCTGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp GCTGTTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCCTaGGGCGGGCGGCCGCGGCCCCAGCGGGTCTGCGCGCTACTTTGC +
Preference number: 5 (lower is better)
Translates to: AVAAVAAAAAVAAAA*GGRPRPQRVCALLC
Trigger: GCAAAGTAGCGCGCAGACCCGCTGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp TGCTGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGCTaGCTGCGGCGGGCGGCCGCGGCCCCAGCGGGTCTGCGCGCTACT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*LRRAAAAPAGLRAT
Trigger: AGTAGCGCGCAGACCCGCTGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp TGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTGTTaGTGCTGCTGCCTGCGGCGGGCGGCCGCGGCCCCAGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCLRRAAAAPAGL
Trigger: CAGACCCGCTGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp TGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTGCTGCTGCTaGTGTTGCTGCTGCTGCCTGCGGCGGGCGGCCGCGGCCCCAGCG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCLRRAAAAPA
Trigger: CGCTGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp CGCCGCGCAGCGGGAAGATGGTGGGGACGCGTACCGTGTAGGTCTTaGGGCCGCCCTGGAAGTGAACGCTGCAGAGACGGTGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: RRAAGRWWGRVPCRS*GRPGSERCRDGGLW
Trigger: CCACAGGCCACCGTCTCTGCAGCGTTCACTTCCAGGGCGGCCGCAAGACCTACACGGTACGCGTCCCCACCATCTTCCCGCTGCGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp TGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTGCTGCTaGTGCTGTTGCTGCTGCTGCCTGCGGCGGGCGGCCGCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCLRRAAAAP
Trigger: TGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp TGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTGCTaGTGCTGCTGTTGCTGCTGCTGCCTGCGGCGGGCGGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCCLRRAAAA
Trigger: GGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 90 bp GTAGAAGTGCAGCGCCTTGTCCCGGTGCGAGTTGTTGTAGCAGCCTaGCACGCAGCACGTAAAGCCAGGCATGGCTGCGCCGCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: VEVQRLVPVRVVVAA*HAARKARHGCAARP
Trigger: GGGCCGCGCGGCGCAGCCATGCCTGGCTTTACGTGCTGCGTGCCAGGCTGCTACAACAACTCGCACCGGGACAAGGCGCTGCACTTCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 90 bp CGGAAGCAGATACCAGGTTCGGCTGCAGCTGGGCAGTCTGGGCAGTaGAGGCAGAGGGTGAGGACTGCTGCTGCTGCTGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RKQIPGSAAAGQSGQ*RQRVRTAAAAAAAA
Trigger: AGCAGCAGCAGCAGCAGCAGCAGCAGTCCTCACCCTCTGCCTCCACTGCCCAGACTGCCCAGCTGCAGCCGAACCTGGTATCTGCTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp GCAGTGGAGGCAGAGGGTGAGGACTGCTGCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AVEAEGEDCCCCCCC*CCCCCCCCCCCCCC
Trigger: GCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCCTCACCCTCTGCCTCCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp TGGGCAGTGGAGGCAGAGGGTGAGGACTGCTGCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: WAVEAEGEDCCCCCC*CCCCCCCCCCCCCC
Trigger: GCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCCTCACCCTCTGCCTCCACTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 90 bp GTACGGATCCCGGAGCCTGACTGCTGTCTACAGTGGCCTGAAGGGTaGGAAGCACGGCCGCGGAAGCAGATACCAGGTTCGGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VRIPEPDCCLQWPEG*EARPRKQIPGSAAA
Trigger: AGCTGCAGCCGAACCTGGTATCTGCTTCCGCGGCCGTGCTTCTCACCCTTCAGGCCACTGTAGACAGCAGTCAGGCTCCGGGATCCGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 90 bp CGCAGGAGCTCCTCCTCCGTGGTGCCTGACGACAAGGAGTACGAATaGTCGGAGCCAGTATCAGGGAAGCCCTCTTCCCCTACCACCACC +
Preference number: 5 (lower is better)
Translates to: RRSSSSVVPDDKEYE*SEPVSGKPSSPTTT
Trigger: GGTGGTGGTAGGGGAAGAGGGCTTCCCTGATACTGGCTCCGACCATTCGTACTCCTTGTCGTCAGGCACCACGGAGGAGGAGCTCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 90 bp CCGCTGCTCATTCAGCTTGCGCAGGAGCTCCTCCTCCGTGGTGCCTaGCGACAAGGAGTACGAATGGTCGGAGCCAGTATCAGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: PLLIQLAQELLLRGA*RQGVRMVGASIREA
Trigger: GGCTTCCCTGATACTGGCTCCGACCATTCGTACTCCTTGTCGTCAGGCACCACGGAGGAGGAGCTCCTGCGCAAGCTGAATGAGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp GGTCTGGGAGTCCAGCAGGCTGCCGGGGCACCAGTTCACATTCCGTaGTTCTTGCGGATGACAGCCATGGCAAGCAGCCGATCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GLGVQQAAGAPVHIP*FLRMTAMASSRSFS
Trigger: TGAGAAGGATCGGCTGCTTGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTGAACTGGTGCCCCGGCAGCCTGCTGGACTCCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 90 bp AGCAGGCTGCCGGGGCACCAGTTCACATTCCGTGCTTCTTGCGGATaGCAGCCATGGCAAGCAGCCGATCCTTCTCACGCAGTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: SRLPGHQFTFRASCG*QPWQAADPSHAVLR
Trigger: GCGAAGAACTGCGTGAGAAGGATCGGCTGCTTGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTGAACTGGTGCCCCGGCAGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp TGTCCCGCTGCTCATTCAGCTTGCGCAGGAGCTCCTCCTCCGTGGTaGCTGACGACAAGGAGTACGAATGGTCGGAGCCAGTATCAGGGA +
Preference number: 5 (lower is better)
Translates to: CPAAHSACAGAPPPW*LTTRSTNGRSQYQG
Trigger: TCCCTGATACTGGCTCCGACCATTCGTACTCCTTGTCGTCAGGCACCACGGAGGAGGAGCTCCTGCGCAAGCTGAATGAGCAGCGGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 90 bp GGATGTCCCGCTGCTCATTCAGCTTGCGCAGGAGCTCCTCCTCCGTaGTGCCTGACGACAAGGAGTACGAATGGTCGGAGCCAGTATCAG +
Preference number: 5 (lower is better)
Translates to: GCPAAHSACAGAPPP*CLTTRSTNGRSQYQ
Trigger: CTGATACTGGCTCCGACCATTCGTACTCCTTGTCGTCAGGCACCACGGAGGAGGAGCTCCTGCGCAAGCTGAATGAGCAGCGGGACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CAA 90 bp AAAGTCATAATTGCTGGTGTCACCAGGGCAGAGTCTAAGGCCCCAGCTTCCACTGCGCCGCGCGAGGCCTaGGGTGGTATCCCACCACTG +
Preference number: 5 (lower is better)
Translates to: KVIIAGVTRAESKAPASTAPREA*GGIPPL
Trigger: CAGTGGTGGGATACCACCCAAGGCCTCGCGCGGCGC...AGTGGAAGCTGGGGCCTTAGACTCTGCCCTGGTGACACCAGCAATTATGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 90 bp TCTTCACTTCCATCAGAGCCAGGATGTCCCGCTGCTCATTCAGCTTaGGCAGGAGCTCCTCCTCCGTGGTGCCTGACGACAAGGAGTACG +
Preference number: 5 (lower is better)
Translates to: SSLPSEPGCPAAHSA*AGAPPPWCLTTRST
Trigger: CGTACTCCTTGTCGTCAGGCACCACGGAGGAGGAGCTCCTGCGCAAGCTGAATGAGCAGCGGGACATCCTGGCTCTGATGGAAGTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 90 bp ACGCGACACGTTCTTGAGCCAGAGGCGCCGCAACTCAGCGTCCTTTaGAAACGTGTAGAAGTGCAGCGCCTTGTCCCGGTGCGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: TRHVLEPEAPQLSVL*KRVEVQRLVPVRVV
Trigger: AACAACTCGCACCGGGACAAGGCGCTGCACTTCTACACGTTTCCAAAGGACGCTGAGTTGCGGCGCCTCTGGCTCAAGAACGTGTCGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CAA 90 bp AACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTGGTGTCACCAGGGCAGAGGCACGCGACACGTTCTaGAGCCAGAGGCGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: NWGGRVDKVIIAGVTRAEARDTF*SQRRRN
Trigger: GTTGCGGCGCCTCTGGCTCAAGAACGTGTCGCGTGC...CTCTGCCCTGGTGACACCAGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CAA 90 bp ACCAGTGCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGGTCCCCTGGCTGGGCTGCAAACTCCACTaGCACTGTGAGATCGATGGG +
Preference number: 5 (lower is better)
Translates to: TSAQEYRGVQQWPAVPWLGCKLH*HCEIDG
Trigger: CCCATCGATCTCACAGTGCAAGTGGAGTTTGCAGCC...CAGCCAGGGGACCGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGCACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CAA 90 bp AACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTGGTGTCACCAGGGCAGAGGCTACTTTGCGCTCATaGACGCCGCGCAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: NWGGRVDKVIIAGVTRAEATLRS*TPRSGK
Trigger: CTTCCCGCTGCGCGGCGTCAATGAGCGCAAAGTAGC...CTCTGCCCTGGTGACACCAGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 90 bp GCAGCCGATCCTTCTCACGCAGTTCTTCGCGCAGCTTGGCCTCAGTaGGACGCAGGTGGCGAATGCTGCCTTTCATCTCTTTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: AADPSHAVLRAAWPQ*DAGGECCLSSLSSS
Trigger: TGAAGATGAAAGAGATGAAAGGCAGCATTCGCCACCTGCGTCTCACTGAGGCCAAGCTGCGCGAAGAACTGCGTGAGAAGGATCGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 90 bp TTCTCACGCAGTTCTTCGCGCAGCTTGGCCTCAGTGAGACGCAGGTaGCGAATGCTGCCTTTCATCTCTTTCATCTTCACTTCCATCAGA +
Preference number: 5 (lower is better)
Translates to: FSRSSSRSLASVRRR*RMLPFISFIFTSIR
Trigger: TCTGATGGAAGTGAAGATGAAAGAGATGAAAGGCAGCATTCGCCACCTGCGTCTCACTGAGGCCAAGCTGCGCGAAGAACTGCGTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CAA 90 bp ACCAGAATCTGCAACAATAACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTGGTCTGCGCGCTACTTaGCGCTCATTGACGCCGCGC +
Preference number: 5 (lower is better)
Translates to: TRICNNNWGGRVDKVIIAGLRAT*RSLTPR
Trigger: GCGCGGCGTCAATGAGCGCAAAGTAGCGCGCAGACC...AGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTTATTGTTGCAGATTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CAA 90 bp TCAGTACTGTCAACCAGTGCCCAGGAGTATAGAGGAGTTCAACAATGGCCTGCGTTCAGGAGGAAACAATaGAGGATGCCAGGTCACCAG +
Preference number: 5 (lower is better)
Translates to: SVLSTSAQEYRGVQQWPAFRRKQ*RMPGHQ
Trigger: CTGGTGACCTGGCATCCTCAATTGTTTCCTCCTGAA...CGCAGGCCATTGTTGAACTCCTCTATACTCCTGGGCACTGGTTGACAGTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CAA 90 bp GGAGGAGAACTGATGTTACTTGAATCTCTTATCACTACACACATTAGAGTTGTCAGTTCTTCGCGCAGCTaGGCCTCAGTGAGACGCAGG +
Preference number: 5 (lower is better)
Translates to: GGELMLLESLITTHIRVVSSSRS*ASVRRR
Trigger: CCTGCGTCTCACTGAGGCCAAGCTGCGCGAAGAACT...GACAACTCTAATGTGTGTAGTGATAAGAGATTCAAGTAACATCAGTTCTCCTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CAA 90 bp GAATTTGTAACCAGTAGCAAACAAAACAGGATAAACCTAAGTCCCTGGCAAGCTCACATTCCGTGCTTCTaGCGGATGACAGCCATGGCA +
Preference number: 5 (lower is better)
Translates to: EFVTSSKQNRINLSPWQAHIPCF*RMTAMA
Trigger: TGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTG...AGCTTGCCAGGGACTTAGGTTTATCCTGTTTTGTTTGCTACTGGTTACAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS-3UTR CAA 90 bp ACCAGAATCTGCAACAATAACTGGGGAGGAAGGGTAGACAAAGTCATAATTGCTGCAACTCAGCGTCCTTaGGAAACGTGTAGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: TRICNNNWGGRVDKVIIAATQRP*ETCRSA
Trigger: TGCACTTCTACACGTTTCCAAAGGACGCTGAGTTGC...AGCAATTATGACTTTGTCTACCCTTCCTCCCCAGTTATTGTTGCAGATTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 72 bp TGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGCTaGCTGCGGCGGGCGGCCGCGGCCCCAGCGGGTCTG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*LRRAAAAPAGL
Trigger: CAGACCCGCTGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 72 bp CGGGCGGCCGCGGCCCCAGCGGGTCTGCGCGCTACTTaGCGCTCATTGACGCCGCGCAGCGGGAAGATGGTG +
Preference number: 6 (lower is better)
Translates to: RAAAAPAGLRAT*RSLTPRSGKMV
Trigger: CACCATCTTCCCGCTGCGCGGCGTCAATGAGCGCAAAGTAGCGCGCAGACCCGCTGGGGCCGCGGCCGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 72 bp TGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTaGTGCTGCCTGCGGCGGGCGGCCGCGGCCCCAGCG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCLRRAAAAPA
Trigger: CGCTGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 72 bp CTGCTGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTGTaGCTGCTGCTGCCTGCGGCGGGCGGCCGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLL*LLLPAAGGRGP
Trigger: GGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 72 bp TGCTGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTGTTaGTGCTGCTGCCTGCGGCGGGCGGCCGCGGCCCCA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCLRRAAAAP
Trigger: TGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 72 bp GCGGCCCCAGCGGGTCTGCGCGCTACTTTGCGCTCATaGACGCCGCGCAGCGGGAAGATGGTGGGGACGCGT +
Preference number: 6 (lower is better)
Translates to: AAPAGLRATLRS*TPRSGKMVGTR
Trigger: ACGCGTCCCCACCATCTTCCCGCTGCGCGGCGTCAATGAGCGCAAAGTAGCGCGCAGACCCGCTGGGGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 90 bp TTGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTGTaGCTGCTGCTGCCTGCGGCGGGCGGCCGCGGCCCCAGCGGGTCT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLPAAGGRGPSGS
Trigger: AGACCCGCTGGGGCCGCGGCCGCCCGCCGCAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 72 bp CGGCCCCAGCGGGTCTGCGCGCTACTTTGCGCTCATTaGCGCCGCGCAGCGGGAAGATGGTGGGGACGCGTA +
Preference number: 6 (lower is better)
Translates to: RPQRVCALLCAH*RRAAGRWWGRV
Trigger: TACGCGTCCCCACCATCTTCCCGCTGCGCGGCGTCAATGAGCGCAAAGTAGCGCGCAGACCCGCTGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 72 bp GCGGGAAGATGGTGGGGACGCGTACCGTGTAGGTCTTaGGGCCGCCCTGGAAGTGAACGCTGCAGAGACGGT +
Preference number: 6 (lower is better)
Translates to: AGRWWGRVPCRS*GRPGSERCRDG
Trigger: ACCGTCTCTGCAGCGTTCACTTCCAGGGCGGCCGCAAGACCTACACGGTACGCGTCCCCACCATCTTCCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 72 bp CAGCGCCTTGTCCCGGTGCGAGTTGTTGTAGCAGCCTaGCACGCAGCACGTAAAGCCAGGCATGGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: QRLVPVRVVVAA*HAARKARHGCA
Trigger: GGCGCAGCCATGCCTGGCTTTACGTGCTGCGTGCCAGGCTGCTACAACAACTCGCACCGGGACAAGGCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 72 bp GAGAAGCACCCACTGACGCCGGCACGCGACACGTTCTaGAGCCAGAGGCGCCGCAACTCAGCGTCCTTTGGA +
Preference number: 6 (lower is better)
Translates to: EKHPLTPARDTF*SQRRRNSASFG
Trigger: TCCAAAGGACGCTGAGTTGCGGCGCCTCTGGCTCAAGAACGTGTCGCGTGCCGGCGTCAGTGGGTGCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 72 bp CCGGAGCCTGACTGCTGTCTACAGTGGCCTGAAGGGTaGGAAGCACGGCCGCGGAAGCAGATACCAGGTTCG +
Preference number: 6 (lower is better)
Translates to: PEPDCCLQWPEG*EARPRKQIPGS
Trigger: CGAACCTGGTATCTGCTTCCGCGGCCGTGCTTCTCACCCTTCAGGCCACTGTAGACAGCAGTCAGGCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 72 bp GCAGAGGGTGAGGACTGCTGCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: AEGEDCCCCCCC*CCCCCCCCCCC
Trigger: ACAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCCTCACCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 72 bp GTCCAGCAGGCTGCCGGGGCACCAGTTCACATTCCGTaGTTCTTGCGGATGACAGCCATGGCAAGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: VQQAAGAPVHIP*FLRMTAMASSR
Trigger: TCGGCTGCTTGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTGAACTGGTGCCCCGGCAGCCTGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 72 bp CGCAGCGGCTGCGCCCTCTGCGGCTGCAAACTCCACTaGCACTGTGAGATCGATGGGCTTCACGTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RSGCALCGCKLH*HCEIDGLHVFS
Trigger: GGAGAAGACGTGAAGCCCATCGATCTCACAGTGCAAGTGGAGTTTGCAGCCGCAGAGGGCGCAGCCGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 90 bp GGAGTCCAGCAGGCTGCCGGGGCACCAGTTCACATTCCGTGCTTCTaGCGGATGACAGCCATGGCAAGCAGCCGATCCTTCTCACGCAGT +
Preference number: 6 (lower is better)
Translates to: GVQQAAGAPVHIPCF*RMTAMASSRSFSRS
Trigger: ACTGCGTGAGAAGGATCGGCTGCTTGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTGAACTGGTGCCCCGGCAGCCTGCTGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 72 bp GCAGCGGCTGCGCCCTCTGCGGCTGCAAACTCCACTTaGACTGTGAGATCGATGGGCTTCACGTCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: AAAAPSAAANST*TVRSMGFTSSP
Trigger: TGGAGAAGACGTGAAGCCCATCGATCTCACAGTGCAAGTGGAGTTTGCAGCCGCAGAGGGCGCAGCCGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 72 bp AGCAGCCGATCCTTCTCACGCAGTTCTTCGCGCAGCTaGGCCTCAGTGAGACGCAGGTGGCGAATGCTGCCT +
Preference number: 6 (lower is better)
Translates to: SSRSFSRSSSRS*ASVRRRWRMLP
Trigger: AGGCAGCATTCGCCACCTGCGTCTCACTGAGGCCAAGCTGCGCGAAGAACTGCGTGAGAAGGATCGGCTGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 72 bp CAGGCTGCCGGGGCACCAGTTCACATTCCGTGCTTCTaGCGGATGACAGCCATGGCAAGCAGCCGATCCTTC +
Preference number: 6 (lower is better)
Translates to: QAAGAPVHIPCF*RMTAMASSRSF
Trigger: GAAGGATCGGCTGCTTGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTGAACTGGTGCCCCGGCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 72 bp CCGGGGCACCAGTTCACATTCCGTGCTTCTTGCGGATaGCAGCCATGGCAAGCAGCCGATCCTTCTCACGCA +
Preference number: 6 (lower is better)
Translates to: PGHQFTFRASCG*QPWQAADPSHA
Trigger: TGCGTGAGAAGGATCGGCTGCTTGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTGAACTGGTGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 72 bp GTTCTTGAGCCAGAGGCGCCGCAACTCAGCGTCCTTTaGAAACGTGTAGAAGTGCAGCGCCTTGTCCCGGTG +
Preference number: 6 (lower is better)
Translates to: VLEPEAPQLSVL*KRVEVQRLVPV
Trigger: CACCGGGACAAGGCGCTGCACTTCTACACGTTTCCAAAGGACGCTGAGTTGCGGCGCCTCTGGCTCAAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 72 bp TCCTCCTCCGTGGTGCCTGACGACAAGGAGTACGAATaGTCGGAGCCAGTATCAGGGAAGCCCTCTTCCCCT +
Preference number: 6 (lower is better)
Translates to: SSSVVPDDKEYE*SEPVSGKPSSP
Trigger: AGGGGAAGAGGGCTTCCCTGATACTGGCTCCGACCATTCGTACTCCTTGTCGTCAGGCACCACGGAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 90 bp GCCATGGCAAGCAGCCGATCCTTCTCACGCAGTTCTTCGCGCAGCTaGGCCTCAGTGAGACGCAGGTGGCGAATGCTGCCTTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: AMASSRSFSRSSSRS*ASVRRRWRMLPFIS
Trigger: AGAGATGAAAGGCAGCATTCGCCACCTGCGTCTCACTGAGGCCAAGCTGCGCGAAGAACTGCGTGAGAAGGATCGGCTGCTTGCCATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CAA 90 bp ATCTTCACTTCCATCAGAGCCAGGATGTCCCGCTGCTCATTCAGCTaGCGCAGGAGCTCCTCCTCCGTGGTGCCTGACGACAAGGAGTAC +
Preference number: 6 (lower is better)
Translates to: IFTSIRARMSRCSFS*RRSSSSVVPDDKEY
Trigger: GTACTCCTTGTCGTCAGGCACCACGGAGGAGGAGCTCCTGCGCAAGCTGAATGAGCAGCGGGACATCCTGGCTCTGATGGAAGTGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 72 bp ATTCAGCTTGCGCAGGAGCTCCTCCTCCGTGGTGCCTaGCGACAAGGAGTACGAATGGTCGGAGCCAGTATC +
Preference number: 6 (lower is better)
Translates to: IQLAQELLLRGA*RQGVRMVGASI
Trigger: GATACTGGCTCCGACCATTCGTACTCCTTGTCGTCAGGCACCACGGAGGAGGAGCTCCTGCGCAAGCTGAAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS TCA 72 bp CCTTCTCACGCAGTTCTTCGCGCAGCTTGGCCTCAGTaGGACGCAGGTGGCGAATGCTGCCTTTCATCTCTT +
Preference number: 6 (lower is better)
Translates to: PSHAVLRAAWPQ*DAGGECCLSSL
Trigger: AAGAGATGAAAGGCAGCATTCGCCACCTGCGTCTCACTGAGGCCAAGCTGCGCGAAGAACTGCGTGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS GCA 72 bp TTCATCTTCACTTCCATCAGAGCCAGGATGTCCCGCTaGTCATTCAGCTTGCGCAGGAGCTCCTCCTCCGTG +
Preference number: 6 (lower is better)
Translates to: FIFTSIRARMSR*SFSLRRSSSSV
Trigger: CACGGAGGAGGAGCTCCTGCGCAAGCTGAATGAGCAGCGGGACATCCTGGCTCTGATGGAAGTGAAGATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3
CDS CCA 72 bp AGTTCTTCGCGCAGCTTGGCCTCAGTGAGACGCAGGTaGCGAATGCTGCCTTTCATCTCTTTCATCTTCACT +
Preference number: 6 (lower is better)
Translates to: SSSRSLASVRRR*RMLPFISFIFT
Trigger: AGTGAAGATGAAAGAGATGAAAGGCAGCATTCGCCACCTGCGTCTCACTGAGGCCAAGCTGCGCGAAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303596.3