Pregenerated sensors for THAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000131931Ensembl transcript IDs: ENST00000254250.7, ENST00000345117.2, ENST00000529779.1, ENST00000532093.1
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCTCCTTTAATTTTTCAAGCTGCCGTTCTTGCCTTCTGCATCGCTaGTGTGCGGTCTTGAGCTTCTTTCTGAGTTTTTCAACTTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TSFNFSSCRSCLLHR*CAVLSFFLSFSTCC Trigger: ACAGCAAGTTGAAAAACTCAGAAAGAAGCTCAAGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGAAAAATTAAAGGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000345117.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGATACATAACTACAGCTGGGGAACTGGATGTCCTTCAGCTAGGGTGTAATTCAAGCTGCCGTTCTTaGCTTCTGCATCGCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GRYITTAGELDVLQLGCNSSCRS*LLHRCC Trigger: ACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGA...ATTACACCCTAGCTGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTATCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345117.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAATTTTTCAAGCTGCCGTTCTTGCCTTCTGCATCGCTGCTGTGCGGTCTTGATCCTTTTCCGCTGGTaGATTGTATCCTCCACAGTA | + |
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Preference number: 2 (lower is better) Translates to: FNFSSCRSCLLHRCCAVLILFRW*IVSSTV Trigger: TACTGTGGAGGATACAATGCACCAGCGGAAAAGGAT...CAAGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGAAAAATTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000345117.2 |
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| 3UTR-3UTR GCA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGAGCCGTTCTTGCCTTCTaGATCGCTGCTGTGCGGTCT | + |
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Preference number: 2 (lower is better) Translates to: DTNQTLLTQHICQRLEGRAVLAF*IAAVRS Trigger: AGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGC...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345117.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGATACATAACTACAGCTGGGGAACTGGATGTCCTTCAGCTAGGGTGTAATCTAGAGGAGGATATGTaGTATTGCCCCATTAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: GRYITTAGELDVLQLGCNLEEDM*YCPIRN Trigger: ATTTCTAATGGGGCAATACCACATATCCTCCTCTAG...ATTACACCCTAGCTGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTATCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| 3UTR-3UTR TCA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGACATTTGTCAGAGACTTaGAGGCAGATACATAACTAC | + |
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Preference number: 2 (lower is better) Translates to: DTNQTLLTQHICQRLEGRHLSET*RQIHNY Trigger: GTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATG...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| 3UTR-3UTR TCA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGAACAGAACTCACAGTTTaGACAGAAACCTCAGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: DTNQTLLTQHICQRLEGRTELTV*TETSVF Trigger: AAACACTGAGGTTTCTGTTCAAACTGTGAGTTCTGT...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| 3UTR-3UTR CCA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGACTAGAGGAGGATATGTaGTATTGCCCCATTAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: DTNQTLLTQHICQRLEGRLEEDM*YCPIRN Trigger: ATTTCTAATGGGGCAATACCACATATCCTCCTCTAG...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| 3UTR-3UTR TCA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCCAAAATCCCCAATCTTaGAACCAACTTACATTAGAG | + |
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Preference number: 2 (lower is better) Translates to: YDTNQTLLTQHICQRLEGQNPQS*NQLTLE Trigger: CTCTAATGTAAGTTGGTTTCAAGATTGGGGATTTTG...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAATTTTTCAAGCTGCCGTTCTTGCCTTCTGCATCGCTGCTGTGCGGTCTTGTTTTCCGCTGGTGCATaGTATCCTCCACAGTATAGT | + |
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Preference number: 3 (lower is better) Translates to: FNFSSCRSCLLHRCCAVLFSAGA*YPPQYS Trigger: ACTATACTGTGGAGGATACAATGCACCAGCGGAAAA...CAAGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGAAAAATTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000345117.2 |
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| 3UTR GCA 72 bp | AATTTTTCAAGCTGCCGTTCTTGCCTTCTGCATCGCTaGTGTGCGGTCTTGAGCTTCTTTCTGAGTTTTTCA | + |
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Preference number: 3 (lower is better) Translates to: NFSSCRSCLLHR*CAVLSFFLSFS Trigger: TGAAAAACTCAGAAAGAAGCTCAAGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGAAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000345117.2 |
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| 3UTR-3UTR CAA 90 bp | GGCAGATACATAACTACAGCTGGGGAACTGGATGTCCTTCAGCTAGGGTGTAATCCAAAATCCCCAATCTaGAAACCAACTTACATTAGA | + |
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Preference number: 3 (lower is better) Translates to: GRYITTAGELDVLQLGCNPKSPI*KPTYIR Trigger: TCTAATGTAAGTTGGTTTCAAGATTGGGGATTTTGG...ATTACACCCTAGCTGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTATCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| 3UTR TCA 72 bp | TCAAACTCTACTAACACAGCACATTTGTCAGAGACTTaGAGGCAGATACATAACTACAGCTGGGGAACTGGA | + |
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Preference number: 3 (lower is better) Translates to: SNSTNTAHLSET*RQIHNYSWGTG Trigger: TCCAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| 3UTR TCA 72 bp | CCTCTTTCTGATACGTCGTCTTTCTCTTTCTGGAAGTaGACAACCTCCTTTAATTTTTCAAGCTGCCGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PLSDTSSFSFWK*TTSFNFSSCRS Trigger: AGAACGGCAGCTTGAAAAATTAAAGGAGGTTGTTCACTTCCAGAAAGAGAAAGACGACGTATCAGAAAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345117.2 |
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| CDS-3UTR TCA 90 bp | GGCAGATACATAACTACAGCTGGGGAACTGGATGTCCTTCAGCTAGGGTGTAATGGCCTCCCTCGGGGGTaGCTAGTGTGCCCGTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: GRYITTAGELDVLQLGCNGLPRG*LVCPFC Trigger: ACAAAACGGGCACACTAGTCACCCCCGAGGGAGGCC...ATTACACCCTAGCTGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTATCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGCAGGCACTTCACTTCTaGCGCCGCAGAAGGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: QHICQRLEGRYITTAGELQALHF*RRRRQG Trigger: CCCCTGCCTTCTGCGGCGGCAGAAGTGAAGTGCCTG...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGTGTCGTAGCGGTTCTTaGAGCCGTAGGCGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QHICQRLEGRYITTAGELCRSGS*SRRRSR Trigger: CCTGCTCCGCCTACGGCTGCAAGAACCGCTACGACA...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | GGCAGATACATAACTACAGCTGGGGAACTGGATGTCCTTCAGCTAGGGTGTAATGCCGTTCTTGCCTTCTaGATCGCTGCTGTGCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GRYITTAGELDVLQLGCNAVLAF*IAAVRS Trigger: AGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGC...ATTACACCCTAGCTGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTATCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | TTTAATTTTTCAAGCTGCCGTTCTTGCCTTCTGCATCGCTGCTGTGCGGTCTTGTCAAGCTGCCGTTCTTaGCTTCTGCATCGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FNFSSCRSCLLHRCCAVLSSCRS*LLHRCC Trigger: ACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGA...CAAGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGAAAAATTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345117.2 |
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| CDS-3UTR TCA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGAGGCCTCCCTCGGGGGTaGCTAGTGTGCCCGTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: DTNQTLLTQHICQRLEGRGLPRG*LVCPFC Trigger: ACAAAACGGGCACACTAGTCACCCCCGAGGGAGGCC...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACTGTTCTCAGTGTCGCTaGGCTCGGTTGGATTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYCSQCR*ARLDSL Trigger: GAGGGAATCCAACCGAGCGCAGCGACACTGAGAACA...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGATGTCGTAGCGGTTCTTaGAGCCGTAGGCGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: DTNQTLLTQHICQRLEGRCRSGS*SRRRSR Trigger: CCTGCTCCGCCTACGGCTGCAAGAACCGCTACGACA...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR TCA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGGTGGTCACAGAAAACTaGGAGATTAACAGGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: QHICQRLEGRYITTAGELVVTEN*EINRGL Trigger: CAGACCCCTGTTAATCTCTCAGTTTTCTGTGACCAC...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACTCAAGCTGCCGTTCTTaGCTTCTGCATCGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYSSCRS*LLHRCC Trigger: ACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGA...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGGCCCGTTTTGTTGTTTaGATTAGCAGAAGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: QHICQRLEGRYITTAGELARFVV*ISRRTT Trigger: TGTGGTCCTTCTGCTAATGCAAACAACAAAACGGGC...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCGCCGTTCTTGCCTTCTaGATCGCTGCTGTGCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: YDTNQTLLTQHICQRLEGAVLAF*IAAVRS Trigger: AGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGC...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CCA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGAGTCGCTGCGCTCGGTTaGATTCCCTCGCTTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: DTNQTLLTQHICQRLEGRVAALG*IPSLLL Trigger: CAAAAGAAGCGAGGGAATCCAACCGAGCGCAGCGAC...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CCA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGGTAAGAGGAAACTTGTaGAAAGAAACGGGCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: QHICQRLEGRYITTAGELVRGNL*KETGLS Trigger: GGACAAGCCCGTTTCTTTCCACAAGTTTCCTCTTAC...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254250.7 |
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| CDS-3UTR GCA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCTGTTCTCAGTGTCGCTaGGCTCGGTTGGATTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: YDTNQTLLTQHICQRLEGCSQCR*ARLDSL Trigger: GAGGGAATCCAACCGAGCGCAGCGACACTGAGAACA...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CCA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACATAGCAGCATCAACCTaGGAAACAGGAGGCGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYIAAST*ETGGGK Trigger: TTTACCGCCTCCTGTTTCCCAGGTTGATGCTGCTAT...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CCA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGATACATAACTACAGCTaGGGAACTGGATGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QHICQRLEGRYITTAGELIHNYS*GTGCPS Trigger: TGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTAT...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| 3UTR CAA 72 bp | GCTGTTCTAGCTGATGAATCCTTTTCCGCTGGTGCATaGTATCCTCCACAGTATAGTTGTGGTCACAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: AVLADESFSAGA*YPPQYSCGHRK Trigger: TTTTCTGTGACCACAACTATACTGTGGAGGATACAATGCACCAGCGGAAAAGGATTCATCAGCTAGAACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACGCCCGTTTTGTTGTTTaGATTAGCAGAAGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYARFVV*ISRRTT Trigger: TGTGGTCCTTCTGCTAATGCAAACAACAAAACGGGC...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGCAGTCTGGAGTAAAGTaGTCTGAACAAATACTGCTA | + |
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Preference number: 4 (lower is better) Translates to: QHICQRLEGRYITTAGELQSGVK*SEQILL Trigger: TAGCAGTATTTGTTCAGAGCACTTTACTCCAGACTG...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254250.7 |
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| CDS-3UTR GCA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGATCTGCATCGCTGCTGTaGGGTCTTGAGCTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: DTNQTLLTQHICQRLEGRSASLL*GLELLS Trigger: AGAAAGAAGCTCAAGACCGCACAGCAGCGATGCAGA...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCTCTGCATCGCTGCTGTaGGGTCTTGAGCTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: YDTNQTLLTQHICQRLEGSASLL*GLELLS Trigger: AGAAAGAAGCTCAAGACCGCACAGCAGCGATGCAGA...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CCA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACATACATAACTACAGCTaGGGAACTGGATGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYIHNYS*GTGCPS Trigger: TGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTAT...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACTTTTCTTCTGACAGCTaGCTCCCATTCTTTACAAAG | + |
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Preference number: 4 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYFSSDS*LPFFTK Trigger: CTTTGTAAAGAATGGGAGGCAGCTGTCAGAAGAAAA...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254250.7 |
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| CDS-3UTR GCA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGAATCCTTTTCCGCTGGTaGATTGTATCCTCCACAGTA | + |
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Preference number: 4 (lower is better) Translates to: DTNQTLLTQHICQRLEGRILFRW*IVSSTV Trigger: TACTGTGGAGGATACAATGCACCAGCGGAAAAGGAT...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CCA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCATAGCAGCATCAACCTaGGAAACAGGAGGCGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: KAYHRSGPSFNYFIDDNAIAAST*ETGGGK Trigger: TTTACCGCCTCCTGTTTCCCAGGTTGATGCTGCTAT...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR TCA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGATTAACAGGGGTCTaGAGAGGCGGCATTAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: YDTNQTLLTQHICQRLEGRLTGV*RGGISN Trigger: ATTACTAATGCCGCCTCTTCAGACCCCTGTTAATCT...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR TCA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACCAAAATCCCCAATCTTaGAACCAACTTACATTAGAG | + |
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Preference number: 4 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYQNPQS*NQLTLE Trigger: CTCTAATGTAAGTTGGTTTCAAGATTGGGGATTTTG...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR GCA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCATCCTTTTCCGCTGGTaGATTGTATCCTCCACAGTA | + |
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Preference number: 4 (lower is better) Translates to: KAYHRSGPSFNYFIDDNAILFRW*IVSSTV Trigger: TACTGTGGAGGATACAATGCACCAGCGGAAAAGGAT...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR TCA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCCACATAACCTCTTTCTaGTACGTCGTCTTTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: YDTNQTLLTQHICQRLEGHITSF*YVVFLF Trigger: AAAGAGAAAGACGACGTATCAGAAAGAGGTTATGTG...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR TCA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCACAGAACTCACAGTTTaGACAGAAACCTCAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YDTNQTLLTQHICQRLEGTELTV*TETSVF Trigger: AAACACTGAGGTTTCTGTTCAAACTGTGAGTTCTGT...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCCTAGAGGAGGATATGTaGTATTGCCCCATTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KAYHRSGPSFNYFIDDNALEEDM*YCPIRN Trigger: ATTTCTAATGGGGCAATACCACATATCCTCCTCTAG...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CCA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAAGATCTTCTTTTTGTaGAAAGAAACGGGCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YDTNQTLLTQHICQRLEGKIFFL*KETGLS Trigger: GGACAAGCCCGTTTCTTTCCACAAAAAGAAGATCTT...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345117.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCTGGAGTAAAGTGCTCTaGACAAATACTGCTATACTT | + |
|
Preference number: 4 (lower is better) Translates to: KAYHRSGPSFNYFIDDNAWSKVL*TNTAIL Trigger: AAGTATAGCAGTATTTGTTCAGAGCACTTTACTCCA...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254250.7 |
||
| CDS-3UTR TCA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCCAAAATCCCCAATCTTaGAACCAACTTACATTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAYHRSGPSFNYFIDDNAQNPQS*NQLTLE Trigger: CTCTAATGTAAGTTGGTTTCAAGATTGGGGATTTTG...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS GCA 90 bp | GGAGCAGGACTGCACCATCCTTCCGGTCCTCAGGCACTTCACTTCTaGCGCCGCAGAAGGCAGGGGAAGCTGTTCTCAGTGTCGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GAGLHHPSGPQALHF*RRRRQGKLFSVSLR Trigger: GCGCAGCGACACTGAGAACAGCTTCCCCTGCCTTCTGCGGCGGCAGAAGTGAAGTGCCTGAGGACCGGAAGGATGGTGCAGTCCTGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000254250.7 ENST00000345117.2 ENST00000529779.1 |
||
| CDS GCA 90 bp | ACTTCTGCCGCCGCAGAAGGCAGGGGAAGCTGTTCTCAGTGTCGCTaGGCTCGGTTGGATTCCCTCGCTTCTTTTGTAGCTTTGGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSAAAEGRGSCSQCR*ARLDSLASFVALAN Trigger: GTTGGCCAAAGCTACAAAAGAAGCGAGGGAATCCAACCGAGCGCAGCGACACTGAGAACAGCTTCCCCTGCCTTCTGCGGCGGCAGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS GCA 90 bp | GAAACTTGTGGAAAGAAACGGGCTTGTCCTTGTCGTAGCGGTTCTTaGAGCCGTAGGCGGAGCAGGACTGCACCATCCTTCCGGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ETCGKKRACPCRSGS*SRRRSRTAPSFRSS Trigger: TGAGGACCGGAAGGATGGTGCAGTCCTGCTCCGCCTACGGCTGCAAGAACCGCTACGACAAGGACAAGCCCGTTTCTTTCCACAAGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000529779.1 |
||
| CDS GCA 90 bp | TCTTTTTGTGGAAAGAAACGGGCTTGTCCTTGTCGTAGCGGTTCTTaGAGCCGTAGGCGGAGCAGGACTGCACCATCCTTCCGGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFCGKKRACPCRSGS*SRRRSRTAPSFRSS Trigger: TGAGGACCGGAAGGATGGTGCAGTCCTGCTCCGCCTACGGCTGCAAGAACCGCTACGACAAGGACAAGCCCGTTTCTTTCCACAAAAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGATACATAACTACAGCTGGGGAACTGGATGTCCTTCAGCTAGGGTGTAATTTCAAGCTGCCGTTCTaGCCTTCTGCATCGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRYITTAGELDVLQLGCNFKLPF*PSASLL Trigger: CAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGAA...ATTACACCCTAGCTGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTATCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGTTCAAGCTGCCGTTCTaGCCTTCTGCATCGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QHICQRLEGRYITTAGELFKLPF*PSASLL Trigger: CAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGAA...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATTTTTCAAGCTGCCGTTCTTGCCTTCTGCATCGCTGCTGTGCGGTCTTGCGCTGCTGTGCGGTCTaGAGCTTCTTTCTGAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FNFSSCRSCLLHRCCAVLRCCAV*SFFLSF Trigger: AAAACTCAGAAAGAAGCTCAAGACCGCACAGCAGCG...CAAGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGAAAAATTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGCTGCCGTTCTTGCCTTCTGCATCGCTGCTGTGCGGTCTTGAGCTTCTTTCAGAAGATCTTCTTTTaGTGGAAAGAAACGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSCRSCLLHRCCAVLSFFQKIFF*WKETGL Trigger: CAAGCCCGTTTCTTTCCACAAAAAGAAGATCTTCTG...AAAGAAGCTCAAGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACTGTCGCTGCGCTCGGTaGGATTCCCTCGCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYCRCAR*DSLASF Trigger: AAAAGAAGCGAGGGAATCCAACCGAGCGCAGCGACA...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGCGCTGCTGTGCGGTCTaGAGCTTCTTTCTGAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QHICQRLEGRYITTAGELRCCAV*SFFLSF Trigger: AAAACTCAGAAAGAAGCTCAAGACCGCACAGCAGCG...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGCTGCCGTTCTTGCCTTCTGCATCGCTGCTGTGCGGTCTTGAGCTTCTTTAACAGAACTCACAGTTaGAACAGAAACCTCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSCRSCLLHRCCAVLSFFNRTHS*NRNLSV Trigger: AACACTGAGGTTTCTGTTCAAACTGTGAGTTCTGTT...AAAGAAGCTCAAGACCGCACAGCAGCGATGCAGAAGGCAAGAACGGCAGCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGATACATAACTACAGCTGGGGAACTGGATGTCCTTCAGCTAGGGTGTAATACTAGTGTGCCCGTTTaGTTGTTTGCATTAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRYITTAGELDVLQLGCNTSVPV*LFALAE Trigger: TTCTGCTAATGCAAACAACAAAACGGGCACACTAGT...ATTACACCCTAGCTGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTATCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGATGTCGCTGCGCTCGGTaGGATTCCCTCGCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: DTNQTLLTQHICQRLEGRCRCAR*DSLASF Trigger: AAAAGAAGCGAGGGAATCCAACCGAGCGCAGCGACA...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGATACATAACTACAGCTGGGGAACTGGATGTCCTTCAGCTAGGGTGTAATAACAGAACTCACAGTTaGAACAGAAACCTCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRYITTAGELDVLQLGCNNRTHS*NRNLSV Trigger: AACACTGAGGTTTCTGTTCAAACTGTGAGTTCTGTT...ATTACACCCTAGCTGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTATCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACAGTGTGCCCGTTTTGTaGTTTGCATTAGCAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYSVPVL*FALAEG Trigger: TCCTTCTGCTAATGCAAACAACAAAACGGGCACACT...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACATTTGTCAGAGACTTGAAGGCAGATACATAACTACAGCTGGGGAACTGCAGTACAAAGAAATATaGTGGGCACAGCATTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QHICQRLEGRYITTAGELQYKEI*WAQHSL Trigger: AAGAGAATGCTGTGCCCACAATATTTCTTTGTACTG...CAGTTCCCCAGCTGTAGTTATGTATCTGCCTTCAAGTCTCTGACAAATGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254250.7 |
||
| CDS-3UTR CAA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACGCTTCTTTTGTAGCTTaGGCCAACAGTTACAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYASFVA*ANSYSD Trigger: ATCACTGTAACTGTTGGCCAAAGCTACAAAAGAAGC...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CAA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACTTTTTATGTGAAGCCTaGTCCCAACTCAGTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYFLCEA*SQLSQV Trigger: CACTTGACTGAGTTGGGACAAGGCTTCACATAAAAA...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCCGAGTAAGAGGAAACTaGTGGAAAGAAACGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KAYHRSGPSFNYFIDDNARVRGN*WKETGL Trigger: CAAGCCCGTTTCTTTCCACAAGTTTCCTCTTACTCG...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254250.7 |
||
| CDS-3UTR CAA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCAGTGTGCCCGTTTTGTaGTTTGCATTAGCAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KAYHRSGPSFNYFIDDNASVPVL*FALAEG Trigger: TCCTTCTGCTAATGCAAACAACAAAACGGGCACACT...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCTTTTCCGCTGGTGCATaGTATCCTCCACAGTATAGT | + |
|
Preference number: 5 (lower is better) Translates to: YDTNQTLLTQHICQRLEGFSAGA*YPPQYS Trigger: ACTATACTGTGGAGGATACAATGCACCAGCGGAAAA...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CAA 90 bp | CTCCTTTACAGGCTAGAGGAGGATATGTGGTATTGCCCCATTAGAAATCAATACGTCTTAAAGGTTCTATaGCTCTTCAACGATCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLYRLEEDMWYCPIRNQYVLKVL*LFNDLS Trigger: ACTAAGATCGTTGAAGAGCAATAGAACCTTTAAGAC...GTATTGATTTCTAATGGGGCAATACCACATATCCTCCTCTAGCCTGTAAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CAA 90 bp | TATGATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCACTAGTGTGCCCGTTTaGTTGTTTGCATTAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YDTNQTLLTQHICQRLEGTSVPV*LFALAE Trigger: TTCTGCTAATGCAAACAACAAAACGGGCACACTAGT...GCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CAA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGATTCAGTAACTTGTTGTaGCACTCTCTCTTAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DTNQTLLTQHICQRLEGRFSNLL*HSLLKQ Trigger: CTGCTTTAAGAGAGAGTGCAACAACAAGTTACTGAA...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254250.7 |
||
| CDS-3UTR CAA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCTTTTTATGTGAAGCCTaGTCCCAACTCAGTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KAYHRSGPSFNYFIDDNAFLCEA*SQLSQV Trigger: CACTTGACTGAGTTGGGACAAGGCTTCACATAAAAA...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
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| CDS-3UTR CAA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCAGAAGATCTTCTTTCTaGTCATGTGGCTCAGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: KAYHRSGPSFNYFIDDNARRSSF*SCGSVQ Trigger: TTGTACTGAGCCACATGACAAGAAAGAAGATCTTCT...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254250.7 |
||
| CDS-3UTR CAA 90 bp | GATACAAATCAAACTCTACTAACACAGCACATTTGTCAGAGACTTGAAGGCAGACCAAAATCCCCAATCTaGAAACCAACTTACATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: DTNQTLLTQHICQRLEGRPKSPI*KPTYIR Trigger: TCTAATGTAAGTTGGTTTCAAGATTGGGGATTTTGG...TCTGCCTTCAAGTCTCTGACAAATGTGCTGTGTTAGTAGAGTTTGATTTGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCGTATCATAGATCAGGTCCCAGTTTTAATTACTTCATTGATGACAATGCCCCAAAATCCCCAATCTaGAAACCAACTTACATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KAYHRSGPSFNYFIDDNAPKSPI*KPTYIR Trigger: TCTAATGTAAGTTGGTTTCAAGATTGGGGATTTTGG...GGCATTGTCATCAATGAAGTAATTAAAACTGGGACCTGATCTATGATACGCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS CCA 72 bp | TGGTGGCAAAACCCGCGCCACCCTAGGCATCGCCCGTaGGCTCCGAACGCGTCAACCCAGGCCGTGAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: WWQNPRHPRHRP*APNASTQAVSE Trigger: TTCGCTCACGGCCTGGGTTGACGCGTTCGGAGCCCACGGGCGATGCCTAGGGTGGCGCGGGTTTTGCCACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532093.1 |
||
| CDS GCA 72 bp | CTGCACCATCCTTCCGGTCCTCAGGCACTTCACTTCTaGCGCCGCAGAAGGCAGGGGAAGCTGTTCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LHHPSGPQALHF*RRRRQGKLFSV Trigger: CACTGAGAACAGCTTCCCCTGCCTTCTGCGGCGGCAGAAGTGAAGTGCCTGAGGACCGGAAGGATGGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000254250.7 ENST00000345117.2 ENST00000529779.1 |
||
| CDS GCA 72 bp | GCCGCAGAAGGCAGGGGAAGCTGTTCTCAGTGTCGCTaGGCTCGGTTGGATTCCCTCGCTTCTTTTGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAEGRGSCSQCR*ARLDSLASFVA Trigger: AGCTACAAAAGAAGCGAGGGAATCCAACCGAGCGCAGCGACACTGAGAACAGCTTCCCCTGCCTTCTGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000254250.7 ENST00000345117.2 ENST00000529779.1 |
||
| CDS GCA 72 bp | GGAAAGAAACGGGCTTGTCCTTGTCGTAGCGGTTCTTaGAGCCGTAGGCGGAGCAGGACTGCACCATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GKKRACPCRSGS*SRRRSRTAPSF Trigger: GAAGGATGGTGCAGTCCTGCTCCGCCTACGGCTGCAAGAACCGCTACGACAAGGACAAGCCCGTTTCTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000254250.7 ENST00000345117.2 ENST00000529779.1 |
||
| CDS CAA 72 bp | TGGCCTCCCTCGGGGGTGACTAGTGTGCCCGTTTTGTaGTTTGCATTAGCAGAAGGACCACAGCCATCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WPPSGVTSVPVL*FALAEGPQPSP Trigger: GGGCGATGGCTGTGGTCCTTCTGCTAATGCAAACAACAAAACGGGCACACTAGTCACCCCCGAGGGAGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS CAA 72 bp | TGGTGGCCTCCCTCGGGGGTGACTAGTGTGCCCGTTTaGTTGTTTGCATTAGCAGAAGGACCACAGCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: WWPPSGVTSVPV*LFALAEGPQPS Trigger: CGATGGCTGTGGTCCTTCTGCTAATGCAAACAACAAAACGGGCACACTAGTCACCCCCGAGGGAGGCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS CAA 72 bp | GGCAGGGGAAGCTGTTCTCAGTGTCGCTGCGCTCGGTaGGATTCCCTCGCTTCTTTTGTAGCTTTGGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRGSCSQCRCAR*DSLASFVALAN Trigger: GTTGGCCAAAGCTACAAAAGAAGCGAGGGAATCCAACCGAGCGCAGCGACACTGAGAACAGCTTCCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS CAA 90 bp | GCCGCAGAAGGCAGGGGAAGCTGTTCTCAGTGTCGCTGCGCTCGGTaGGATTCCCTCGCTTCTTTTGTAGCTTTGGCCAACAGTTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: AAEGRGSCSQCRCAR*DSLASFVALANSYS Trigger: ACTGTAACTGTTGGCCAAAGCTACAAAAGAAGCGAGGGAATCCAACCGAGCGCAGCGACACTGAGAACAGCTTCCCCTGCCTTCTGCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS TCA 72 bp | TTGTGGTCACAGAAAACTGAGAGATTAACAGGGGTCTaGAGAGGCGGCATTAGTAATCCAATAGCAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LWSQKTERLTGV*RGGISNPIAAS Trigger: TGATGCTGCTATTGGATTACTAATGCCGCCTCTTCAGACCCCTGTTAATCTCTCAGTTTTCTGTGACCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000345117.2 |
||
| CDS TCA 72 bp | TGTATCCTCCACAGTATAGTTGTGGTCACAGAAAACTaGGAGATTAACAGGGGTCTTGTCATGTGGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CILHSIVVVTEN*EINRGLVMWLS Trigger: ACTGAGCCACATGACAAGACCCCTGTTAATCTCTCAGTTTTCTGTGACCACAACTATACTGTGGAGGATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529779.1 |
||
| CDS CAA 72 bp | CAGGGGTCTTGTCATGTGGCTCAGTACAAAGAAATATaGTGGGCACAGCATTCTCTTTCAGTAACTTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QGSCHVAQYKEI*WAQHSLSVTCC Trigger: ACAACAAGTTACTGAAAGAGAATGCTGTGCCCACAATATTTCTTTGTACTGAGCCACATGACAAGACCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529779.1 |
||
| CDS CAA 90 bp | CCAGAAGATCTTCTTTCTTGTCATGTGGCTCAGTACAAAGAAATATaGTGGGCACAGCATTCTCTTTCAGTAACTTGTTGTTGCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PEDLLSCHVAQYKEI*WAQHSLSVTCCCTL Trigger: GAGAGTGCAACAACAAGTTACTGAAAGAGAATGCTGTGCCCACAATATTTCTTTGTACTGAGCCACATGACAAGAAAGAAGATCTTCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254250.7 |
||
| CDS CAA 90 bp | CAAAGAAATATTGTGGGCACAGCATTCTCTTTCAGTAACTTGTTGTaGCACTCTCTCTTAAAGCAGTCTGGAGTAAAGTGCTCTGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: QRNIVGTAFSFSNLL*HSLLKQSGVKCSEQ Trigger: TTGTTCAGAGCACTTTACTCCAGACTGCTTTAAGAGAGAGTGCAACAACAAGTTACTGAAAGAGAATGCTGTGCCCACAATATTTCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254250.7 ENST00000529779.1 |
||
| CDS GCA 72 bp | TTGTTGCACTCTCTCTTAAAGCAGTCTGGAGTAAAGTaGTCTGAACAAATACTGCTATACTTGGTGGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: LLHSLLKQSGVK*SEQILLYLVGL Trigger: TAAACCCACCAAGTATAGCAGTATTTGTTCAGAGCACTTTACTCCAGACTGCTTTAAGAGAGAGTGCAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000254250.7 ENST00000529779.1 ENST00000532093.1 |
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| CDS CAA 72 bp | CTTCTTTCTTGTCATGTGGCTCAGTACAAAGAAATATaGTGGGCACAGCATTCTCTTTCAGTAACTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LLSCHVAQYKEI*WAQHSLSVTCC Trigger: ACAACAAGTTACTGAAAGAGAATGCTGTGCCCACAATATTTCTTTGTACTGAGCCACATGACAAGAAAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254250.7 |
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