RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THADA (Homo sapiens)

Ensembl gene IDs: ENSG00000115970

Ensembl transcript IDs: ENST00000398653.5, ENST00000402360.6, ENST00000402796.5, ENST00000403856.1, ENST00000404790.5, ENST00000405006.8, ENST00000405975.7, ENST00000408045.7, ENST00000436947.1, ENST00000467668.1, ENST00000473004.5, ENST00000474159.6, ENST00000485018.1, ENST00000485353.5, ENST00000486735.5, ENST00000497770.1

Found 917 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTCCCAACAGCCATCCCAGCAGGATGGGCAGTCCAGGGGCCAACTaGTCCCACTGCTGGAGCAGATCACACAGGACGGCCAGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: SPNSHPSRMGSPGAN*SHCWSRSHRTARAR
Trigger: CCTGGCCCTGGCCGTCCTGTGTGATCTGCTCCAGCAGTGGGACCAGTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 90 bp GCTGCCGCGGCCCACACTGCAGCAATGGCTAGTCTGGTGAGGCTCTaGAGGTACTGGGGCAGGCCTGGCACCTTGAAGGCCCAAGGGAAT +
Preference number: 1 (lower is better)
Translates to: AAAAHTAAMASLVRL*RYWGRPGTLKAQGN
Trigger: ATTCCCTTGGGCCTTCAAGGTGCCAGGCCTGCCCCAGTACCTCCAGAGCCTCACCAGACTAGCCATTGCTGCAGTGTGGGCCGCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 90 bp AGGCCACGAGGTCATCACTCTCTCCCAACAGCCATCCCAGCAGGATaGGCAGTCCAGGGGCCAACTGGTCCCACTGCTGGAGCAGATCAC +
Preference number: 1 (lower is better)
Translates to: RPRGHHSLPTAIPAG*AVQGPTGPTAGADH
Trigger: GTGATCTGCTCCAGCAGTGGGACCAGTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGAGAGTGATGACCTCGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 90 bp GCCCACACTGCAGCAATGGCTAGTCTGGTGAGGCTCTGGAGGTACTaGGGCAGGCCTGGCACCTTGAAGGCCCAAGGGAATCCCGTTATC +
Preference number: 1 (lower is better)
Translates to: AHTAAMASLVRLWRY*GRPGTLKAQGNPVI
Trigger: GATAACGGGATTCCCTTGGGCCTTCAAGGTGCCAGGCCTGCCCCAGTACCTCCAGAGCCTCACCAGACTAGCCATTGCTGCAGTGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 90 bp GGGCCTCCCCACTCCGACCCATGCTTCCGTTCTGCCAGTCCAACATaGCAAGTGTCCCCTGACAGAGGAATAAGACAGCTGACTGAGAGA +
Preference number: 1 (lower is better)
Translates to: GPPHSDPCFRSASPT*QVSPDRGIRQLTER
Trigger: TCTCTCAGTCAGCTGTCTTATTCCTCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR GCA 90 bp AAACATGTGCAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATaGTTCCGTTCTGCCAGTCCAACATGGCAAGTGTCCCCTGACAGA +
Preference number: 1 (lower is better)
Translates to: KHVQYPRAGPPHSDP*FRSASPTWQVSPDR
Trigger: TCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTGCACATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR GCA 90 bp GGGCTTGGGGGACGCCAGCCGGACTTTGAGAGGAGACAGAAGAGGTaGTTGCAGAGGTATTTCACAAAGATCAGGGTCTCGGCCCAAAAG +
Preference number: 1 (lower is better)
Translates to: GLGGRQPDFERRQKR*LQRYFTKIRVSAQK
Trigger: CTTTTGGGCCGAGACCCTGATCTTTGTGAAATACCTCTGCAAGCACCTCTTCTGTCTCCTCTCAAAGTCCGGCTGGCGTCCCCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 90 bp TCTGTTCCTTGCCTCTTCCAGCTTCTAGCAGCTGCAGGCATTCCATaGCCTGTAGCCATCTCATGCCAATCTCTACCTACGCTGTCGCAC +
Preference number: 1 (lower is better)
Translates to: SVPCLFQLLAAAGIP*PVAISCQSLPTLSH
Trigger: GTGCGACAGCGTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCTAGAAGCTGGAAGAGGCAAGGAACAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR TCA 90 bp AAGGTGACAGAGCATCTCAGGGCTTGGGGGACGCCAGCCGGACTTTaGGAGGAGACAGAAGAGGTGCTTGCAGAGGTATTTCACAAAGAT +
Preference number: 1 (lower is better)
Translates to: KVTEHLRAWGTPAGL*EETEEVLAEVFHKD
Trigger: ATCTTTGTGAAATACCTCTGCAAGCACCTCTTCTGTCTCCTCTCAAAGTCCGGCTGGCGTCCCCCAAGCCCTGAGATGCTCTGTCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 90 bp GTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCTTaGCTCTTCCAGCTTCTAGCAGCTGCAGGCATTCCATGGCCTGTA +
Preference number: 1 (lower is better)
Translates to: VSVGPCTPEALKSVP*LFQLLAAAGIPWPV
Trigger: TACAGGCCATGGAATGCCTGCAGCTGCTAGAAGCTGGAAGAGGCAAGGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CCA 90 bp CAGATCAAGAACTCCTTTGGGGTCAGATGGACACAGTGCTCCGTCTaGGGAAGCCACTCACCAGGGTCCATGCAGTGGAGAATTTTCAGT +
Preference number: 1 (lower is better)
Translates to: QIKNSFGVRWTQCSV*GSHSPGSMQWRIFS
Trigger: ACTGAAAATTCTCCACTGCATGGACCCTGGTGAGTGGCTTCCCCAGACGGAGCACTGTGTCCATCTGACCCCAAAGGAGTTCTTGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR TCA 90 bp TCCAGTGTTAGTGAGCGCACTTCAGGGAAGGCAGATTCTAACAGCTaGGAGAAAGAGATGGGGACATTCGTCTCCCGCTCTCCACTCTTG +
Preference number: 1 (lower is better)
Translates to: SSVSERTSGKADSNS*EKEMGTFVSRSPLL
Trigger: CAAGAGTGGAGAGCGGGAGACGAATGTCCCCATCTCTTTCTCTCAGCTGTTAGAATCTGCCTTCCCTGAAGTGCGCTCACTAACACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 90 bp GGTGATTTTCCTTCATGGCCAACAATAAGAACTTCTCTCCCATGTTaGACAGCAAGGGTGGCACGCCCTTCTCTCCAAGTCCAGAGGCTG +
Preference number: 1 (lower is better)
Translates to: GDFPSWPTIRTSLPC*TARVARPSLQVQRL
Trigger: CAGCCTCTGGACTTGGAGAGAAGGGCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTTCTTATTGTTGGCCATGAAGGAAAATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR TCA 90 bp GCAGGTAGGAAGCTGTCACACAGTCGTATGGTTTGGTGCTTGTGCTaGGCTCCAATGCTGCCTGAAATAAGCCTTGCAGTTTCCCCGAAT +
Preference number: 1 (lower is better)
Translates to: AGRKLSHSRMVWCLC*APMLPEISLAVSPN
Trigger: ATTCGGGGAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACAGCTTCCTACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR TCA 90 bp TTCAACGACGGCCAGCCTAGACTCTGTAGGAAGATGGTCTTCACATaGCAAGATGACCAGCTGAACCCACTGCTTCAGCTCAGCAGCTAT +
Preference number: 1 (lower is better)
Translates to: FNDGQPRLCRKMVFT*QDDQLNPLLQLSSY
Trigger: ATAGCTGCTGAGCTGAAGCAGTGGGTTCAGCTGGTCATCTTGTCATGTGAAGACCATCTTCCTACAGAGTCTAGGCTGGCCGTCGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 90 bp AGCTACCTTACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTaGTATTCACACCCTATCTGTCCCTCAGTGCCTGCTCAAGCCTAC +
Preference number: 1 (lower is better)
Translates to: SYLTTHLRKATSIPS*YSHPICPSVPAQAY
Trigger: GTAGGCTTGAGCAGGCACTGAGGGACAGATAGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGTAAGGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CCA 90 bp TCTTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTaGGGTCAGATGGACACAGTGCTCCGTCTGGGGAAGCCACTCACC +
Preference number: 1 (lower is better)
Translates to: SFIGSNIHRPDQELL*GQMDTVLRLGKPLT
Trigger: GGTGAGTGGCTTCCCCAGACGGAGCACTGTGTCCATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 90 bp TGTATCCTGCAACTCAAGAATAGGATGGGGGTTGGTGAGGAAAAGTaGTGTAGTACTGGTGAGGACTTCAACGACGGCCAGCCTAGACTC +
Preference number: 1 (lower is better)
Translates to: CILQLKNRMGVGEEK*CSTGEDFNDGQPRL
Trigger: GAGTCTAGGCTGGCCGTCGTTGAAGTCCTCACCAGTACTACACCACTTTTCCTCACCAACCCCCATCCTATTCTTGAGTTGCAGGATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR TCA 90 bp GCCTCAAGCAAGCCAAAGTCCTTTCCTCTTGAATGCGTAGTCTTGTaGACTCCACTGTCTTCACAAACTCAGCAGCTGGTGGAAGCTCTC +
Preference number: 1 (lower is better)
Translates to: ASSKPKSFPLECVVL*TPLSSQTQQLVEAL
Trigger: GAGAGCTTCCACCAGCTGCTGAGTTTGTGAAGACAGTGGAGTTCACAAGACTACGCATTCAAGAGGAAAGGACTTTGGCTTGCTTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 90 bp CGGAGGGCCTTTGCAGTTAACACTATCCTACCACCACCAGAGTCCTaGAACACAGATTTTGAACATGGCATTACAGAGAGGACTCCCTGT +
Preference number: 1 (lower is better)
Translates to: RRAFAVNTILPPPES*NTDFEHGITERTPC
Trigger: ACAGGGAGTCCTCTCTGTAATGCCATGTTCAAAATCTGTGTTGCAGGACTCTGGTGGTGGTAGGATAGTGTTAACTGCAAAGGCCCTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR GCA 90 bp TGGCCTGTAGCCATCTCATGCCAATCTCTACCTACGCTGTCGCACTaGCTCCTCTTTCTTTTGTTTGTCAAATCTCTCTCTGCCTCTGTC +
Preference number: 1 (lower is better)
Translates to: WPVAISCQSLPTLSH*LLFLLFVKSLSASV
Trigger: GACAGAGGCAGAGAGAGATTTGACAAACAAAAGAAAGAGGAGGCAGTGCGACAGCGTAGGTAGAGATTGGCATGAGATGGCTACAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CCA 90 bp GGAAAGGTAGTAACACTAACACATGCGCCTCTTCTGGAGCTACTCTaGTGGAACTTACAGAGGACCTACGGAGGGCCTTTGCAGTTAACA +
Preference number: 1 (lower is better)
Translates to: GKVVTLTHAPLLELL*WNLQRTYGGPLQLT
Trigger: TGTTAACTGCAAAGGCCCTCCGTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTGTTAGTGTTACTACCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR TCA 90 bp GATTTTGCCTCTTGGCCAGCCAGAGTTTGGCTTTGGTACAAACAGTaGTGTCAGTCAGCTCGTGCTGGAAGTCTGAATTCGTTCCGTGTT +
Preference number: 1 (lower is better)
Translates to: DFASWPARVWLWYKQ*CQSARAGSLNSFRV
Trigger: AACACGGAACGAATTCAGACTTCCAGCACGAGCTGACTGACATCACTGTTTGTACCAAAGCCAAACTCTGGCTGGCCAAGAGGCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 90 bp ACCTGCTCCACCGTCAATAATCCATCAGAAGATTCTGGCACAGGCTaGATGGGCAGAAGCTGGCACAACATGCCTAAAAGTAAAGCAACT +
Preference number: 1 (lower is better)
Translates to: TCSTVNNPSEDSGTG*MGRSWHNMPKSKAT
Trigger: AGTTGCTTTACTTTTAGGCATGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAGAATCTTCTGATGGATTATTGACGGTGGAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CCA 90 bp GCTCCACCGTCAATAATCCATCAGAAGATTCTGGCACAGGCTGCATaGGCAGAAGCTGGCACAACATGCCTAAAAGTAAAGCAACTTCCT +
Preference number: 1 (lower is better)
Translates to: APPSIIHQKILAQAA*AEAGTTCLKVKQLP
Trigger: AGGAAGTTGCTTTACTTTTAGGCATGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAGAATCTTCTGATGGATTATTGACGGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CCA 90 bp AAGGTAGTAACACTAACACATGCGCCTCTTCTGGAGCTACTCTGGTaGAACTTACAGAGGACCTACGGAGGGCCTTTGCAGTTAACACTA +
Preference number: 1 (lower is better)
Translates to: KVVTLTHAPLLELLW*NLQRTYGGPLQLTL
Trigger: TAGTGTTAACTGCAAAGGCCCTCCGTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTGTTAGTGTTACTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR TCA 90 bp TCCAAAAAGGCCAGCAGCCTCAAGCAAGCCAAAGTCCTTTCCTCTTaGATGCGTAGTCTTGTGAACTCCACTGTCTTCACAAACTCAGCA +
Preference number: 1 (lower is better)
Translates to: SKKASSLKQAKVLSS*MRSLVNSTVFTNSA
Trigger: TGCTGAGTTTGTGAAGACAGTGGAGTTCACAAGACTACGCATTCAAGAGGAAAGGACTTTGGCTTGCTTGAGGCTGCTGGCCTTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 90 bp CTGCAAAGCTCCTGTTATACAGTGGACTCGCCCATACATTGGAAATaGTGCTGCTGCCTGAAGCAGAGAATTTTCAGCCTGAGATACTTC +
Preference number: 1 (lower is better)
Translates to: LQSSCYTVDSPIHWK*CCCLKQRIFSLRYF
Trigger: GAAGTATCTCAGGCTGAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTCCACTGTATAACAGGAGCTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR TCA 90 bp CAGCTGGGGAGTGTGGACAACAGAGTTCGAATGGTATTAGGAATGTaGTCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCA +
Preference number: 1 (lower is better)
Translates to: QLGSVDNRVRMVLGM*SIITNGTKARAAIS
Trigger: TGAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTGTCCACACTCCCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR GCA 90 bp TCCTGTTATACAGTGGACTCGCCCATACATTGGAAATGCTGCTGCTaGCTGAAGCAGAGAATTTTCAGCCTGAGATACTTCTTCCTCAAG +
Preference number: 1 (lower is better)
Translates to: SCYTVDSPIHWKCCC*LKQRIFSLRYFFLK
Trigger: CTTGAGGAAGAAGTATCTCAGGCTGAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTCCACTGTATAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR GCA 90 bp CAAAGCTCCTGTTATACAGTGGACTCGCCCATACATTGGAAATGCTaGTGCTGCCTGAAGCAGAGAATTTTCAGCCTGAGATACTTCTTC +
Preference number: 1 (lower is better)
Translates to: QSSCYTVDSPIHWKC*CCLKQRIFSLRYFF
Trigger: GAAGAAGTATCTCAGGCTGAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTCCACTGTATAACAGGAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR GCA 90 bp TTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTaGAGACTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGC +
Preference number: 1 (lower is better)
Translates to: LLYSCIRHEVLPGIS*RLKMSMSSSYSQTC
Trigger: GCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR CCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATaGGACCAAGGCACGAGCTGCCATTTCACGGGAGTGGTAGACAGG +
Preference number: 1 (lower is better)
Translates to: QQSSNGIRNVIYHNK*DQGTSCHFTGVVDR
Trigger: CCTGTCTACCACTCCCGTGAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR TCA 90 bp GCTTGCAGAGGTATTTCACAAAGATCAGGGTCTCGGCCCAAAAGTTaGCTTCTGCTTTTTCAAACAGGTAGTCTTCTTCCACCTGATGCA +
Preference number: 1 (lower is better)
Translates to: ACRGISQRSGSRPKS*LLLFQTGSLLPPDA
Trigger: TGCATCAGGTGGAAGAAGACTACCTGTTTGAAAAAGCAGAAGTCAACTTTTGGGCCGAGACCCTGATCTTTGTGAAATACCTCTGCAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 90 bp CAGAAGATTCTGGCACAGGCTGCATGGGCAGAAGCTGGCACAACATaGCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATA +
Preference number: 1 (lower is better)
Translates to: QKILAQAAWAEAGTT*LKVKQLPSYFSNNI
Trigger: TATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAGAATCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR GCA 90 bp AAGACTCTCAGTCAATTCCACAAAGAAAGGATCAGGGACGAAATCTaGACCTTCCACAGTGAGCCGGTGCATTTGGAGAAGGTTTTTGAA +
Preference number: 1 (lower is better)
Translates to: KTLSQFHKERIRDEI*TFHSEPVHLEKVFE
Trigger: TTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTCGTCCCTGATCCTTTCTTTGTGGAATTGACTGAGAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR GCA 90 bp ATTAAATGCGTGTACTATGGCAGGAAAGGTAGTAACACTAACACATaGGCCTCTTCTGGAGCTACTCTGGTGGAACTTACAGAGGACCTA +
Preference number: 1 (lower is better)
Translates to: IKCVYYGRKGSNTNT*ASSGATLVELTEDL
Trigger: TAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTGTTAGTGTTACTACCTTTCCTGCCATAGTACACGCATTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR GCA 90 bp GAGGTATTTCACAAAGATCAGGGTCTCGGCCCAAAAGTTGACTTCTaGTTTTTCAAACAGGTAGTCTTCTTCCACCTGATGCATGCTCTC +
Preference number: 1 (lower is better)
Translates to: EVFHKDQGLGPKVDF*FFKQVVFFHLMHAL
Trigger: GAGAGCATGCATCAGGTGGAAGAAGACTACCTGTTTGAAAAAGCAGAAGTCAACTTTTGGGCCGAGACCCTGATCTTTGTGAAATACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR TCA 90 bp CTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATaGCTTTGGAAGCAAGTCTCAGAGCTACACTCTGAATTTCAGATC +
Preference number: 1 (lower is better)
Translates to: LSIPCSPHMSACGGK*LWKQVSELHSEFQI
Trigger: GATCTGAAATTCAGAGTGTAGCTCTGAGACTTGCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR TCA 90 bp CGCACTCCTGGAGACTGGCTGTTAAGATTGTATGTAATAAAGAACTaGATCCACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGA +
Preference number: 1 (lower is better)
Translates to: RTPGDWLLRLYVIKN*IHCISSMETISVLR
Trigger: TCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGGATTCAGTTCTTTATTACATACAATCTTAACAGCCAGTCTCCAGGAGTGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR GCA 90 bp CAATACTCTAATAGGATGCCCTGTGAAGAACACCATTATCACCTATaGAACATTCCTGCAAAAATGTACAGCATGAATCAAATCATCAGG +
Preference number: 1 (lower is better)
Translates to: QYSNRMPCEEHHYHL*NIPAKMYSMNQIIR
Trigger: CCTGATGATTTGATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTCACAGGGCATCCTATTAGAGTATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CCA 90 bp AAACAGAAGGGTGCTGTTTGGTTAACTCATTCTCTGGTTCACGTTTaGATTTACTCTGCTCCAATTTATAAAGTACCTGAGAACTTTCCT +
Preference number: 1 (lower is better)
Translates to: KQKGAVWLTHSLVHV*IYSAPIYKVPENFP
Trigger: AGGAAAGTTCTCAGGTACTTTATAAATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGAATGAGTTAACCAAACAGCACCCTTCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR TCA 90 bp TCTCTAATCTCTGAGTTGCCACGGCACCTAAGAGTCTGTACCACATaGTTTAGTCAATTACTGCCTTTCATTGTTATAATATCTAACACA +
Preference number: 1 (lower is better)
Translates to: SLISELPRHLRVCTT*FSQLLPFIVIISNT
Trigger: TGTGTTAGATATTATAACAATGAAAGGCAGTAATTGACTAAATCATGTGGTACAGACTCTTAGGTGCCGTGGCAACTCAGAGATTAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR GCA 90 bp AAAGCAACTTCCTTCATACTTCTCCAACAACATACCAGCACCATCTaGGCAGTTACATCACATGTTTTTACTTCTTTACCTTTGATTTCT +
Preference number: 1 (lower is better)
Translates to: KATSFILLQQHTSTI*AVTSHVFTSLPLIS
Trigger: AGAAATCAAAGGTAAAGAAGTAAAAACATGTGATGTAACTGCGCAGATGGTGCTGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CCA 90 bp ATTGGCTACAGTTTCCAACTGTTTGAGAAGAAAAGGATAGAGTTCTaGGAAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTT +
Preference number: 1 (lower is better)
Translates to: IGYSFQLFEKKRIEF*ETREKLSPCHSICF
Trigger: AAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAGTTGGAAACTGTAGCCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR CCA 90 bp ACAAAACAACTTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTaGAGACTGGCTGTTAAGATTGTATGTAATAAAGAACTGAATCCA +
Preference number: 1 (lower is better)
Translates to: TKQLFKKRTDLLPHS*RLAVKIVCNKELNP
Trigger: TGGATTCAGTTCTTTATTACATACAATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAAGTTGTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR TCA 90 bp AACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATaGATCAAATCATCAGGAAACAATGAGACAAACCCTGAGACATAT +
Preference number: 1 (lower is better)
Translates to: NTIITYATFLQKCTA*IKSSGNNETNPETY
Trigger: ATATGTCTCAGGGTTTGTCTCATTGTTTCCTGATGATTTGATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR GCA 90 bp CCAAAGAGATTAACTCTTTCATTGTTATTTTCAACAAATCCATTCTaGCTTTCTTTGGTTCAGATGCCAACAGTGCCTGTATGTAGAAAG +
Preference number: 1 (lower is better)
Translates to: PKRLTLSLLFSTNPF*LSLVQMPTVPVCRK
Trigger: CTTTCTACATACAGGCACTGTTGGCATCTGAACCAAAGAAAGGCAGAATGGATTTGTTGAAAATAACAATGAAAGAGTTAATCTCTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CAA 90 bp ACTGCTCTGACACCATCCTTTGAAGGTGACAGAGCATCTCAGGGCTaGGGGGACGCCAGCCGGACTTTGAGAGGAGACAGAAGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: TALTPSFEGDRASQG*GDASRTLRGDRRGA
Trigger: AGCACCTCTTCTGTCTCCTCTCAAAGTCCGGCTGGCGTCCCCCAAGCCCTGAGATGCTCTGTCACCTTCAAAGGATGGTGTCAGAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp GAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACACCAACCCCACTCCGACCCATaGTTCCGTTCTGCCAGTCCA +
Preference number: 2 (lower is better)
Translates to: ESRRSTIHRGSVESLQHQPHSDP*FRSASP
Trigger: TGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGG...TTGGTGTTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp TCATCACTCTCTCCCAACAGCCATCCCAGCAGGATGGGCAGTCCAGGGGCCAACGCTCCTGTTATACAGTaGACTCGCCCATACATTGGA +
Preference number: 2 (lower is better)
Translates to: SSLSPNSHPSRMGSPGANAPVIQ*TRPYIG
Trigger: TCCAATGTATGGGCGAGTCCACTGTATAACAGGAGC...GTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGAGAGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CAA 90 bp GGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCTaGCCTCTTCCAGCTTCTAGCAGCTGCAGGCATTCCATGGCCTGT +
Preference number: 2 (lower is better)
Translates to: GVSRAMHSRGSKICS*PLPASSSCRHSMAC
Trigger: ACAGGCCATGGAATGCCTGCAGCTGCTAGAAGCTGGAAGAGGCAAGGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR TCA 90 bp CACGGGAGTGGTAGACAGGTGAGTGACCACACCTGTCTACTGTATTGGCTACAGGGGATGAGCTCTGAATaGCTGGAGACACCACAGTGG +
Preference number: 2 (lower is better)
Translates to: HGSGRQVSDHTCLLYWLQGMSSE*LETPQW
Trigger: CCACTGTGGTGTCTCCAGTCATTCAGAGCTCATCCC...CTGTAGCCAATACAGTAGACAGGTGTGGTCACTCACCTGTCTACCACTCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402796.5
3UTR-3UTR GCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCCCAGCAGGCGGAGGTTaGAGTGAGCCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSPAGGG*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACCTCCGCCTGCTGG...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp ATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACTGGCACAGGCTGCATaGGCAGAAGCTGGCACAACA +
Preference number: 2 (lower is better)
Translates to: MNVVLPETLVSAAGECGQLAQAA*AEAGTT
Trigger: TGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAG...TTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CAA 90 bp CTGGAGCTACTCTGGTGGAACTTACAGAGGACCTACGGAGGGCCTTaGCAGTTAACACTATCCTACCACCACCAGAGTCCTGCAACACAG +
Preference number: 2 (lower is better)
Translates to: LELLWWNLQRTYGGP*QLTLSYHHQSPATQ
Trigger: CTGTGTTGCAGGACTCTGGTGGTGGTAGGATAGTGTTAACTGCAAAGGCCCTCCGTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR TCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCACAGTGTCCATTGGGATaGGGCCTTCAGGGGATGAGC +
Preference number: 2 (lower is better)
Translates to: NLEKCPMNVVLPETLVSAQCPLG*GLQGMS
Trigger: GCTCATCCCCTGAAGGCCTCATCCCAATGGACACTG...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp GCTGAGCAGGATATTTTCCTGTTTGACCACAGTCAACGAAGACAGCACAAGCAAGTAGCGGCATGCGCCTaGAGTCCCAGCTACTCGGGA +
Preference number: 2 (lower is better)
Translates to: AEQDIFLFDHSQRRQHKQVAACA*SPSYSG
Trigger: TCCCGAGTAGCTGGGACTTCAGGCGCATGCCGCTAC...TTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp TCATCACTCTCTCCCAACAGCCATCCCAGCAGGATGGGCAGTCCAGGGGCCAACAACTCAAGAATAGGATaGGGGTTGGTGAGGAAAAGT +
Preference number: 2 (lower is better)
Translates to: SSLSPNSHPSRMGSPGANNSRIG*GLVRKS
Trigger: ACTTTTCCTCACCAACCCCCATCCTATTCTTGAGTT...GTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGAGAGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR TCA 90 bp AGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGCTGTTTAGAGATTCAGGGGATGAGCTCTaGATGACTGGAGACACCACA +
Preference number: 2 (lower is better)
Translates to: SFSTTGLHSLTNCRLFRDSGDEL*MTGDTT
Trigger: TGTGGTGTCTCCAGTCATTCAGAGCTCATCCCCTGA...ATCTCTAAACAGCCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000402796.5
3UTR-3UTR TCA 90 bp TGCTCAAGCCTACAGCAATCTCTAATCTCTGAGTTGCCACGGCACCTAAGAGTCGAGGCCTTCAGGGGATaGGCTCTGAATGACTGGAGA +
Preference number: 2 (lower is better)
Translates to: CSSLQQSLISELPRHLRVEAFRG*ALNDWR
Trigger: TCTCCAGTCATTCAGAGCTCATCCCCTGAAGGCCTC...GACTCTTAGGTGCCGTGGCAACTCAGAGATTAGAGATTGCTGTAGGCTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR TCA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCCAGTGTCCATTGGGATaGGGCCTTCAGGGGATGAGC +
Preference number: 2 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSQCPLG*GLQGMS
Trigger: GCTCATCCCCTGAAGGCCTCATCCCAATGGACACTG...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGCCCCACTCCGACCCATaGTTCCGTTCTGCCAGTCCA +
Preference number: 2 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVPHSDP*FRSASP
Trigger: TGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGG...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCGTCAGATGGACACAGTaGTCCGTCTGGGGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSVRWTQ*SVWGSH
Trigger: GTGGCTTCCCCAGACGGAGCACTGTGTCCATCTGAC...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR TCA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACATCAGGGGATGAGCTCTaGATGACTGGAGACACCACA +
Preference number: 2 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTSGDEL*MTGDTT
Trigger: TGTGGTGTCTCCAGTCATTCAGAGCTCATCCCCTGA...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp TGCTCAAGCCTACAGCAATCTCTAATCTCTGAGTTGCCACGGCACCTAAGAGTCCACTGCCCAGACCGGTaGTGTAAAACCCAGAATTGC +
Preference number: 2 (lower is better)
Translates to: CSSLQQSLISELPRHLRVHCPDR*CKTQNC
Trigger: GCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTG...GACTCTTAGGTGCCGTGGCAACTCAGAGATTAGAGATTGCTGTAGGCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR GCA 90 bp CACGGGAGTGGTAGACAGGTGAGTGACCACACCTGTCTACTGTATTGGCTACAGTCAAATGCTCCTCTGTaGCTGGACTGCAAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: HGSGRQVSDHTCLLYWLQSNAPL*LDCKRC
Trigger: ACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGA...CTGTAGCCAATACAGTAGACAGGTGTGGTCACTCACCTGTCTACCACTCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402796.5
3UTR-3UTR GCA 90 bp TGTCACACAGTCGTATGGTTTGGTGCTTGTGCTGAGCTCCAATGCTGCCTGAAACCCATGCTTCCGTTCTaGCAGTCCAACATGGCAAGT +
Preference number: 2 (lower is better)
Translates to: CHTVVWFGACAELQCCLKPMLPF*QSNMAS
Trigger: ACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGG...TTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGGCCTTGCTTTATTCTTaGATCAGACACGAGGTTCTC +
Preference number: 2 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTEALLYS*IRHEVL
Trigger: GAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGC...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TCATCACTCTCTCCCAACAGCCATCCCAGCAGGATGGGCAGTCCAGGGGCCAACAAAGAAACAGAAGGGTaGTGTTTGGTTAACTCATTC +
Preference number: 2 (lower is better)
Translates to: SSLSPNSHPSRMGSPGANKETEG*CLVNSF
Trigger: GAATGAGTTAACCAAACAGCACCCTTCTGTTTCTTT...GTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGAGAGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCACCAGCTTCTAGCAGCTaGAGGCATTCCATGGCCTGT +
Preference number: 2 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPPASSS*RHSMAC
Trigger: ACAGGCCATGGAATGCCTGCAGCTGCTAGAAGCTGG...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp GCTGAGCAGGATATTTTCCTGTTTGACCACAGTCAACGAAGACAGCACAAGCAAGTAATCTCACCACTTTaGGAGGCCGAGGCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AEQDIFLFDHSQRRQHKQVISPL*EAEAGR
Trigger: TCTGCCCGCCTCGGCCTCCCAAAGTGGTGAGATTAC...TTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGAGCTCCCTCATGCTTTaGCCATTCCCTGTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRSSLML*PFPVKE
Trigger: CTCCTTCACAGGGAATGGCCAAAGCATGAGGGAGCT...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCTCCTTTGGGGTCAGATaGACACAGTGCTCCGTCTGG +
Preference number: 2 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSSFGVR*TQCSVW
Trigger: CCAGACGGAGCACTGTGTCCATCTGACCCCAAAGGA...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CAA 90 bp AAGCTACCTTACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTaGCTATTCACACCCTATCTGTCCCTCAGTGCCTGCTCAAGCCTA +
Preference number: 2 (lower is better)
Translates to: KLPYYPPKKGNFHPL*LFTPYLSLSACSSL
Trigger: TAGGCTTGAGCAGGCACTGAGGGACAGATAGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGTAAGGTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CAA 90 bp ATCTTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTaGGGGTCAGATGGACACAGTGCTCCGTCTGGGGAAGCCACTCAC +
Preference number: 2 (lower is better)
Translates to: IFHWKQYPSSRSRTP*GSDGHSAPSGEATH
Trigger: GTGAGTGGCTTCCCCAGACGGAGCACTGTGTCCATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR TCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGGAGGCCTTCAGGGGATaGGCTCTGAATGACTGGAGA +
Preference number: 2 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVEAFRG*ALNDWR
Trigger: TCTCCAGTCATTCAGAGCTCATCCCCTGAAGGCCTC...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTGATTCTGGCACAGGCTaGATGGGCAGAAGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGDSGTG*MGRSWH
Trigger: GTGCCAGCTTCTGCCCATGCAGCCTGTGCCAGAATC...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCGGAAACACTGGTCAGTaGAGCTGGGGAGTGTGGACA +
Preference number: 2 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSGNTGQ*SWGVWT
Trigger: TGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCC...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CCAACAATAAGAACTTCTCTCCCATGTTGCACAGCAAGGGTGGCACGCCCTTCTGGTGAACAAAACATGTaGAGTATCCAAGAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: PTIRTSLPCCTARVARPSGEQNM*SIQEQG
Trigger: GCCCTGCTCTTGGATACTGCACATGTTTTGTTCACC...AGAAGGGCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTTCTTATTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CCA 90 bp ATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAAATGCTCCTCTGTGCCTaGACTGCAAAAGGTGTTGTT +
Preference number: 2 (lower is better)
Translates to: MNVVLPETLVSAAGECGQMLLCA*TAKGVV
Trigger: AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCAT...TTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CAA 90 bp TTGCAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTaGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAG +
Preference number: 2 (lower is better)
Translates to: LQQMKNLEKCPMNVV*PETLVSAAGECGQQ
Trigger: CTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CAA 90 bp CCTTGCTCATGTGGGATTTTAACATACCTCTTGGCCAGCCAGAGTTaGGCTTTGGTACAAACAGTGATGTCAGTCAGCTCGTGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PCSCGILTYLLASQS*ALVQTVMSVSSCWK
Trigger: CTTCCAGCACGAGCTGACTGACATCACTGTTTGTACCAAAGCCAAACTCTGGCTGGCCAAGAGGTATGTTAAAATCCCACATGAGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CAA 90 bp GTCACCAAACATGGATTTTGCCTCTTGGCCAGCCAGAGTTTGGCTTaGGTACAAACAGTGATGTCAGTCAGCTCGTGCTGGAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: VTKHGFCLLASQSLA*VQTVMSVSSCWKSE
Trigger: TTCAGACTTCCAGCACGAGCTGACTGACATCACTGTTTGTACCAAAGCCAAACTCTGGCTGGCCAAGAGGCAAAATCCATGTTTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR TCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCAGGGATGAGCTCTGAATaGCTGGAGACACCACAGTGG +
Preference number: 2 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPGMSSE*LETPQW
Trigger: CCACTGTGGTGTCTCCAGTCATTCAGAGCTCATCCC...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGCACTGCCCAGACCGGTaGTGTAAAACCCAGAATTGC +
Preference number: 2 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVHCPDR*CKTQNC
Trigger: GCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTG...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCTGCACCTTCCACAGTaGGCCGGTGCATTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGLHLPQ*AGAFGE
Trigger: TTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAG...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCTCATGCCCAGACCGGTaGTGTAAAACCCAGAATTGC +
Preference number: 2 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSSCPDR*CKTQNC
Trigger: GCAATTCTGGGTTTTACATCACCGGTCTGGGCATGA...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp AGGAGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGTTTAGAGATATACATTGGAAATGCTaGTGCTGCCTGAAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: RSFSTTGLHSLTNCRFRDIHWKC*CCLKQR
Trigger: TCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTAT...ATCTCTAAACCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR GCA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACATACCAGCACCATCTaGGCAGTTACATCACATGTT +
Preference number: 2 (lower is better)
Translates to: HAESRRSTIHRGSVESLQHTSTI*AVTSHV
Trigger: AACATGTGATGTAACTGCGCAGATGGTGCTGGTATG...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGACCAAGGCACGAGCTaGCATTTCACGGGAGTGGTA +
Preference number: 2 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFDQGTS*HFTGVV
Trigger: TACCACTCCCGTGAAATGGCAGCTCGTGCCTTGGTC...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp CCAACAATAAGAACTTCTCTCCCATGTTGCACAGCAAGGGTGGCACGCCCTTCTATGTCAGTCAGCTCGTaGTGGAAGTCTGAATTCGTT +
Preference number: 2 (lower is better)
Translates to: PTIRTSLPCCTARVARPSMSVSS*WKSEFV
Trigger: AACGAATTCAGACTTCCAGCACGAGCTGACTGACAT...AGAAGGGCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTTCTTATTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGGACCATTTTTCAGCCTaGCATCCCCACGTGAATAAG +
Preference number: 2 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRDHFSA*HPHVNK
Trigger: CTTATTCACGTGGGGATGGCAGGCTGAAAAATGGTC...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCGACTCGCCCATACATTaGAAATGCTGCTGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSDSPIH*KCCCCL
Trigger: CAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTC...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCCTGGCACAGGCTGCATaGGCAGAAGCTGGCACAACA +
Preference number: 2 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFLAQAA*AEAGTT
Trigger: TGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAG...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp AGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGCTGTTTAGAGATCAAGTCTCATGCCACTaGTCAATCCAAGAACTCTCA +
Preference number: 2 (lower is better)
Translates to: SFSTTGLHSLTNCRLFRDQVSCH*SIQELS
Trigger: TGAGAGTTCTTGGATTGACCAGTGGCATGAGACTTG...ATCTCTAAACAGCCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCGTAATCCCAGCACTTTaGGAGACTAAGCAAGGCGGA +
Preference number: 2 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSVIPAL*ETKQGG
Trigger: TCCGCCTTGCTTAGTCTCCCAAAGTGCTGGGATTAC...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CAA 90 bp TGGCCATTCCCTGTGAAGGAGCAGCTGAGCAGGATATTTTCCTGTTaGACCACAGTCAACGAAGACAGCACAAGCAAGAAATCCCACATT +
Preference number: 2 (lower is better)
Translates to: WPFPVKEQLSRIFSC*TTVNEDSTSKKSHI
Trigger: AATGTGGGATTTCTTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGCTGCTCCTTCACAGGGAATGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CAA 90 bp GGGAAGCGTAGAGTCTCTCCAACACCAAAAGTAAGAGAAACATGCTaGGATGACGATTTGGTTCTCCCATATCATGCCCAGACCGGTGAT +
Preference number: 2 (lower is better)
Translates to: GKRRVSPTPKVRETC*DDDLVLPYHAQTGD
Trigger: ATCACCGGTCTGGGCATGATATGGGAGAACCAAATCGTCATCCAAGCATGTTTCTCTTACTTTTGGTGTTGGAGAGACTCTACGCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR TCA 90 bp ATCAAAAGGAGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGCTGAGAGAATTTTCAGCCTaGGATACTTCTTCCTCAAGA +
Preference number: 2 (lower is better)
Translates to: IKRSFSTTGLHSLTNCRLREFSA*DTSSSR
Trigger: TCTTGAGGAAGAAGTATCTCAGGCTGAAAATTCTCT...CAGCCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCTCCTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000402796.5
3UTR-3UTR TCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCAGGCAGAGGTCACGGTaGTCATGCCACTGTACCCCA +
Preference number: 2 (lower is better)
Translates to: SQLSNIITMALSHCPITCRQRSR*SCHCTP
Trigger: TGGGGTACAGTGGCATGATCACCGTGACCTCTGCCT...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR GCA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACAATACATTGGAAATGCTaGTGCTGCCTGAAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTIHWKC*CCLKQR
Trigger: TCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTAT...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACACCTCTGTGCCTGGACTaGAAAAGGTGTTGTTTAAAG +
Preference number: 2 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTPLCLD*KRCCLK
Trigger: CTTTAAACAACACCTTTTGCAGTCCAGGCACAGAGG...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGATGCTCCTCTGTGCCTaGACTGCAAAAGGTGTTGTT +
Preference number: 2 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKMLLCA*TAKGVV
Trigger: AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCAT...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCAATGCTCCTCTGTGCCTaGACTGCAAAAGGTGTTGTT +
Preference number: 2 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIAMLLCA*TAKGVV
Trigger: AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCAT...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTTGCAGCTGGGGAGTGTaGACAACAGAGTTCGAATGG +
Preference number: 2 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFCSWGV*TTEFEW
Trigger: CCATTCGAACTCTGTTGTCCACACTCCCCAGCTGCA...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATCTGCCAGTCCAACATaGCAAGTGTCCCCTGACAGA +
Preference number: 2 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPSASPT*QVSPDR
Trigger: TCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGA...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp TGTCACACAGTCGTATGGTTTGGTGCTTGTGCTGAGCTCCAATGCTGCCTGAAAGTGAGCCGGTGCATTTaGAGAAGGTTTTTGAACATG +
Preference number: 2 (lower is better)
Translates to: CHTVVWFGACAELQCCLKVSRCI*RRFLNM
Trigger: CATGTTCAAAAACCTTCTCCAAATGCACCGGCTCAC...TTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR CAA 90 bp ATAACTTCTGCAAAGCTCCTGTTATACAGTGGACTCGCCCATACATaGGAAATGCTGCTGCTGCCTGAAGCAGAGAATTTTCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: ITSAKLLLYSGLAHT*EMLLLPEAENFQPE
Trigger: CTCAGGCTGAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTCCACTGTATAACAGGAGCTTTGCAGAAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CAA 90 bp TCATGTGGGATTTTAACATACCTCTTGGCCAGCCAGAGTTTGGCTTaGGTACAAACAGTGATGTCAGTCAGCTCGTGCTGGAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: SCGILTYLLASQSLA*VQTVMSVSSCWKSE
Trigger: TTCAGACTTCCAGCACGAGCTGACTGACATCACTGTTTGTACCAAAGCCAAACTCTGGCTGGCCAAGAGGTATGTTAAAATCCCACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR TCA 90 bp GAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACACCAAAGAGAATTTTCAGCCTaGGATACTTCTTCCTCAAGA +
Preference number: 2 (lower is better)
Translates to: ESRRSTIHRGSVESLQHQREFSA*DTSSSR
Trigger: TCTTGAGGAAGAAGTATCTCAGGCTGAAAATTCTCT...TTGGTGTTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATCAGTGTCCATTGGGATaGGGCCTTCAGGGGATGAGC +
Preference number: 2 (lower is better)
Translates to: IRNNIFSQARISEQCSKDQCPLG*GLQGMS
Trigger: GCTCATCCCCTGAAGGCCTCATCCCAATGGACACTG...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGTCTCCCAACTATACTTaGATTCCCATTCAGGCTGTC +
Preference number: 2 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKSPNYT*IPIQAV
Trigger: GACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGA...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGGGATATTTTCCTGTTTaGCCACAGTCAACGAAGACA +
Preference number: 2 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRGYFPV*PQSTKT
Trigger: TGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCC...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR TCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGACTATTGAAATTCTATaGACTGATGGGAGACTCCCG +
Preference number: 2 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRTIEIL*TDGRLP
Trigger: CGGGAGTCTCCCATCAGTTCATAGAATTTCAATAGT...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR GCA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCATAAGCCAATTCAAATaGTCCTCTGTGCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSISQFK*SSVPGL
Trigger: CAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTAT...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp TTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTGGGGTCAGATCCCATGCTTCCGTTCTaGCAGTCCAACATGGCAAGT +
Preference number: 2 (lower is better)
Translates to: FHWKQYPSSRSRTPLGSDPMLPF*QSNMAS
Trigger: ACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGG...ATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCCTCCCAGGTATCAGTTaGAGACTGAAGATGTCCATG +
Preference number: 2 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSLPGIS*RLKMSM
Trigger: CATGGACATCTTCAGTCTGCAACTGATACCTGGGAG...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGCTCCCAGGTATCAGTTaGAGACTGAAGATGTCCATG +
Preference number: 2 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVLPGIS*RLKMSM
Trigger: CATGGACATCTTCAGTCTGCAACTGATACCTGGGAG...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACCACCATTATCACCTATaGAACATTCCTGCAAAAATG +
Preference number: 2 (lower is better)
Translates to: SSCRHSMACSHLMPISTYHHYHL*NIPAKM
Trigger: CATTTTTGCAGGAATGTTGCATAGGTGATAATGGTG...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACATCCATCAGAAGATTCTaGCACAGGCTGCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETSIRRF*HRLHGQ
Trigger: CTGCCCATGCAGCCTGTGCCAGAATCTTCTGATGGA...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp GAAACATGCTTGGATGACGATTTGGTTCTCCCATATCACTGTCTACTGTATTGGTCCATCAGAAGATTCTaGCACAGGCTGCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: ETCLDDDLVLPYHCLLYWSIRRF*HRLHGQ
Trigger: CTGCCCATGCAGCCTGTGCCAGAATCTTCTGATGGA...CCAATACAGTAGACAGTGATATGGGAGAACCAAATCGTCATCCAAGCATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR CCA 90 bp TTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTGGGGTCAGATTCTGCCAGTCCAACATaGCAAGTGTCCCCTGACAGA +
Preference number: 2 (lower is better)
Translates to: FHWKQYPSSRSRTPLGSDSASPT*QVSPDR
Trigger: TCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGA...ATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR TCA 90 bp CTAACACATGCGCCTCTTCTGGAGCTACTCTGGTGGAACTTACAGAGGACCTACAGCACAGAGTTTAGATaGAGGATCACTGCATTTAAT +
Preference number: 2 (lower is better)
Translates to: LTHAPLLELLWWNLQRTYSTEFR*RITAFN
Trigger: ATTAAATGCAGTGATCCTTCATCTAAACTCTGTGCT...GTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR TCA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATGGAGTGGTAGACAGGTaGGTGACCACACCTGTCTAC +
Preference number: 2 (lower is better)
Translates to: IRNNIFSQARISEQCSKDGVVDR*VTTPVY
Trigger: GTAGACAGGTGTGGTCACTCACCTGTCTACCACTCC...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402796.5
3UTR-3UTR TCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATGGAGAAGTGTCCCATaGATGTGGTTTTGCCGGAAA +
Preference number: 2 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPWRSVP*MWFCRK
Trigger: TTTCCGGCAAAACCACATTCATGGGACACTTCTCCA...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp AGGCAGACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTTGGCTCTTTAATCTGTaGACTCAAGGTGAACAAAAC +
Preference number: 2 (lower is better)
Translates to: RQTRMTVEHPARLRSSAGWLFNL*TQGEQN
Trigger: GTTTTGTTCACCTTGAGTTCACAGATTAAAGAGCCA...ACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCTGCATAAGGTACCAATaGCTGGTCTCCCATCACCTC +
Preference number: 2 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFCIRYQ*LVSHHL
Trigger: GAGGTGATGGGAGACCAGTCATTGGTACCTTATGCA...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CTCGAGGCTGAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATTGGAAATGCTGCTGCTaGCTGAAGCAGAGAATTTTC +
Preference number: 2 (lower is better)
Translates to: LEAESHSESSVSGLLTLNWKCCC*LKQRIF
Trigger: GAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCA...ATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTCAGCCTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTCACTCGCTCACCAACTaGAGGCTGTTTAGAGATAAC +
Preference number: 2 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKIHSLTN*RLFRDN
Trigger: GTTATCTCTAAACAGCCTGCAGTTGGTGAGCGAGTG...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGAAGCTGGCACAACATaGCTAAAAGTAAAGCAACTT +
Preference number: 2 (lower is better)
Translates to: NLEKCPMNVVLPETLVSAEAGTT*LKVKQL
Trigger: AAGTTGCTTTACTTTTAGGCATGTTGTGCCAGCTTC...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATCAAATGCTCCTCTGTaGCTGGACTGCAAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPSNAPL*LDCKRC
Trigger: ACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGA...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCATTTCTTTGGTTCAGATaGCAACAGTGCCTGTATGTA +
Preference number: 2 (lower is better)
Translates to: NLEKCPMNVVLPETLVSAFLWFR*QQCLYV
Trigger: TACATACAGGCACTGTTGGCATCTGAACCAAAGAAA...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTGGTGAACAAAACATGTaGAGTATCCAAGAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGGEQNM*SIQEQG
Trigger: GCCCTGCTCTTGGATACTGCACATGTTTTGTTCACC...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTATCAGGGACGAAATCTaGACCTTCCACAGTGAGCCG +
Preference number: 2 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIIRDEI*TFHSEP
Trigger: CGGCTCACTGTGGAAGGTGCAGATTTCGTCCCTGAT...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGTCCCACACACTTAGATaGAGCTACAACTGCTTTAAA +
Preference number: 2 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRSHTLR*SYNCFK
Trigger: TTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGA...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp GCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCGACTCGCCCATACATTaGAAATGCTGCTGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: AFLPWKQFLCSDYFHKASDSPIH*KCCCCL
Trigger: CAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTC...GCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp ATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTCTGGAGACACCACAGTaGAAAGCCTGTAGGACATCA +
Preference number: 2 (lower is better)
Translates to: ISFRIICKRLADSESVSILETPQ*KACRTS
Trigger: TGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAG...AATGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCCTGGCACAGGCTGCATaGGCAGAAGCTGGCACAACA +
Preference number: 2 (lower is better)
Translates to: KREKNSLPVILFVLECSSLAQAA*AEAGTT
Trigger: TGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAG...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR CAA 90 bp GTTCCCAATGGGTATAGACATATTCCAAAAGTCTCCCAACTATACTaGAATTCCCATTCAGGCTGTCCGTTAGGCTCGGGGAACTTGATT +
Preference number: 2 (lower is better)
Translates to: VPNGYRHIPKVSQLY*NSHSGCPLGSGNLI
Trigger: AATCAAGTTCCCCGAGCCTAACGGACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGACTTTTGGAATATGTCTATACCCATTGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR CAA 90 bp GGGAAGCGTAGAGTCTCTCCAACACCAAAAGTAAGAGAAACATGCTaGGATGACGATTTGGTTCTCCCATATCACTGTCTACTGTATTGG +
Preference number: 2 (lower is better)
Translates to: GKRRVSPTPKVRETC*DDDLVLPYHCLLYW
Trigger: CCAATACAGTAGACAGTGATATGGGAGAACCAAATCGTCATCCAAGCATGTTTCTCTTACTTTTGGTGTTGGAGAGACTCTACGCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR TCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACAAAAGAGAAGTGTGGATaGATTTCGCACTGCCCAGAC +
Preference number: 2 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETKEKCG*ISHCPD
Trigger: GTCTGGGCAGTGCGAAATTCATCCACACTTCTCTTT...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCAAAGAGAAGTGTGGATaGATTTCGCACTGCCCAGAC +
Preference number: 2 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFKEKCG*ISHCPD
Trigger: GTCTGGGCAGTGCGAAATTCATCCACACTTCTCTTT...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp GCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCATGGCAAGTGTCCCCTaGCAGAGGAATAAGACAGCT +
Preference number: 2 (lower is better)
Translates to: AFLPWKQFLCSDYFHKASMASVP*QRNKTA
Trigger: AGCTGTCTTATTCCTCTGTCAGGGGACACTTGCCAT...GCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp AGGCTGTCCGTTAGGCTCGGGGAACTTGATTCAAGGACTTGTATGGCTGAATTATCTGTGAACTCAAGGTaGACAAAACATGTGCAGTAT +
Preference number: 2 (lower is better)
Translates to: RLSVRLGELDSRTCMAELSVNSR*TKHVQY
Trigger: ATACTGCACATGTTTTGTTCACCTTGAGTTCACAGA...TAATTCAGCCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGTGGAAATGCTGCTGCTaGCTGAAGCAGAGAATTTTC +
Preference number: 2 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLWKCCC*LKQRIF
Trigger: GAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCA...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCAATAAGCCAATTCAAATaGTCCTCTGTGCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPISQFK*SSVPGL
Trigger: CAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTAT...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACATGTTCTGGCAGCTTTTaGAGACTCACATTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETCSGSF*RLTFGH
Trigger: GTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTTGTAAAACCCAGAATTaGAGCCTTAGCTCCATCAGC +
Preference number: 2 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGCKTQN*SLSSIS
Trigger: GCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp ATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAAGGAATGTTCATCCTTTaGCCTTTTAACTCCAAAAAT +
Preference number: 2 (lower is better)
Translates to: MNVVLPETLVSAAGECGQGMFIL*PFNSKN
Trigger: ATTTTTGGAGTTAAAAGGGCAAAGGATGAACATTCC...TTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACATCCACAGTGAGCCGGTaGATTTGGAGAAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETSTVSR*IWRRFL
Trigger: CAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGA...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TGTCACACAGTCGTATGGTTTGGTGCTTGTGCTGAGCTCCAATGCTGCCTGAAAAAAGAAACAGAAGGGTaGTGTTTGGTTAACTCATTC +
Preference number: 2 (lower is better)
Translates to: CHTVVWFGACAELQCCLKKETEG*CLVNSF
Trigger: GAATGAGTTAACCAAACAGCACCCTTCTGTTTCTTT...TTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR-3UTR GCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCATGTCAAATCTCTCTCTaGCTCTGTCTTGTAAGGATA +
Preference number: 2 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPCQISL*LCLVRI
Trigger: TATCCTTACAAGACAGAGGCAGAGAGAGATTTGACA...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR GCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGTTTAAAAGTAATGCCTaGAGTATGGCTTGCTCCATT +
Preference number: 2 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRFKSNA*SMACSI
Trigger: AATGGAGCAAGCCATACTGCAGGCATTACTTTTAAA...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTTGCAGCTGGGGAGTGTaGACAACAGAGTTCGAATGG +
Preference number: 2 (lower is better)
Translates to: RNNIFSQARISEQCSKDICSWGV*TTEFEW
Trigger: CCATTCGAACTCTGTTGTCCACACTCCCCAGCTGCA...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTACTGGTCAGTGCAGCTaGGGAGTGTGGACAACAGAG +
Preference number: 2 (lower is better)
Translates to: CKTQNCSLSSISNIRNNITGQCS*GVWTTE
Trigger: CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGT...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATTCTCAGAGCATCCAATaGATGTTCCCAATGGGTATA +
Preference number: 2 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNSQSIQ*MFPMGI
Trigger: TATACCCATTGGGAACATCCATTGGATGCTCTGAGA...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCTCTCTGGTTCACGTTTaGATTTACTCTGCTCCAATT +
Preference number: 2 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSSLVHV*IYSAPI
Trigger: AATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGA...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CCA 90 bp CTTACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTCACTGTCTACTGTATTaGCTACAGTTTCCAACTGTT +
Preference number: 2 (lower is better)
Translates to: LTTHLRKATSIPSCYSHPHCLLY*LQFPTV
Trigger: AACAGTTGGAAACTGTAGCCAATACAGTAGACAGTG...AGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CAA 90 bp CTATCCTTACTTGGCAATGCTGATGAATTAAGCCTTGCTTTATTCTaGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAA +
Preference number: 2 (lower is better)
Translates to: LSLLGNADELSLALF*HQTRGSPRYQLQTE
Trigger: TTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGCATTGCCAAGTAAGGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR CAA 90 bp CAGTTAACACTATCCTACCACCACCAGAGTCCTGCAACACAGATTTaGAACATGGCATTACAGAGAGGACTCCCTGTATATTACATGAGA +
Preference number: 2 (lower is better)
Translates to: QLTLSYHHQSPATQI*NMALQRGLPVYYMR
Trigger: TCTCATGTAATATACAGGGAGTCCTCTCTGTAATGCCATGTTCAAAATCTGTGTTGCAGGACTCTGGTGGTGGTAGGATAGTGTTAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CAA 90 bp GGACCCTTCTTCCATGTAAGGTTTGCATTCACAGCTTCTAAAGATTaGATGTGGATGTGTTTTAGAGACCATTTTTCAGCCTGCCATCCC +
Preference number: 2 (lower is better)
Translates to: GPFFHVRFAFTASKD*MWMCFRDHFSACHP
Trigger: GGGATGGCAGGCTGAAAAATGGTCTCTAAAACACATCCACATCAAATCTTTAGAAGCTGTGAATGCAAACCTTACATGGAAGAAGGGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR TCA 90 bp GAAATCTGCACCTTCCACAGTGAGCCGGTGCATTTGGAGAAGGTTTTTGAACATTTAGTATCTCGAGGCTaGATCTCATTCAGAATCATC +
Preference number: 2 (lower is better)
Translates to: EICTFHSEPVHLEKVFEHLVSRG*ISFRII
Trigger: GATGATTCTGAATGAGATTCAGCCTCGAGATACTAA...ATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACAAGGATATTTAAAGCATaGACCTGGGGGACTGTACTC +
Preference number: 2 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETRIFKA*TWGTVL
Trigger: GAGTACAGTCCCCCAGGTTCATGCTTTAAATATCCT...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp ACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTATCCAGTTTCCAACTGTTTaGGAAGAAAAGGATAGAGTT +
Preference number: 2 (lower is better)
Translates to: TTHLRKATSIPSCYSHPIQFPTV*EEKDRV
Trigger: AACTCTATCCTTTTCTTCTCAAACAGTTGGAAACTG...GATAGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR TCA 90 bp TTTCAACAAAAACAAGCTGATTGGTGGGCAGACAAAAAGCCATATTACATGCCCTCCGTGTTTGGAGTCTaGGTAGGCTTGCAACAAATG +
Preference number: 2 (lower is better)
Translates to: FQQKQADWWADKKPYYMPSVFGV*VGLQQM
Trigger: CATTTGTTGCAAGCCTACTCAGACTCCAAACACGGA...GGGCATGTAATATGGCTTTTTGTCTGCCCACCAATCAGCTTGTTTTTGTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR GCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGGAAGCTGGCACAACATaGCTAAAAGTAAAGCAACTT +
Preference number: 2 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVEAGTT*LKVKQL
Trigger: AAGTTGCTTTACTTTTAGGCATGTTGTGCCAGCTTC...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTTGTTCTGGCAGCTTTTaGAGACTCACATTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: TVLCMSSVGPAKEINSFICSGSF*RLTFGH
Trigger: GTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCTTCAGATGCCAACAGTaGCTGTATGTAGAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSFRCQQ*LYVERN
Trigger: ATTCCTTTCTACATACAGGCACTGTTGGCATCTGAA...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCTGTAAAACCCAGAATTaGAGCCTTAGCTCCATCAGC +
Preference number: 2 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFCKTQN*SLSSIS
Trigger: GCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATAGCTATTCGCAGACATaGCATCAAAGCTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: IRNNIFSQARISEQCSKDSYSQT*HQSSQS
Trigger: GCTCTGGGAGCTTTGATGGCATGTCTGCGAATAGCT...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCCCTATGCAACATTCCTaGAAAAATGTACAGCATGAA +
Preference number: 2 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSPMQHS*KNVQHE
Trigger: TTCATGCTGTACATTTTTGCAGGAATGTTGCATAGG...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR GCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCAAACTTAAGAATATCTaGAAGGACCCTTCTTCCATG +
Preference number: 2 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSKLKNI*KDPSSM
Trigger: CATGGAAGAAGGGTCCTTGCAGATATTCTTAAGTTT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAAGACTCGCCCATACATTaGAAATGCTGCTGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQDSPIH*KCCCCL
Trigger: CAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTC...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp CTTACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTAAAAGGATAGAGTTCTaGGAAACGAGAGAAAAACTC +
Preference number: 2 (lower is better)
Translates to: LTTHLRKATSIPSCYSHPKRIEF*ETREKL
Trigger: GAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTT...AGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR CCA 90 bp TTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTGGGGTCAGATATCTATCATAACAAATaGGACCAAGGCACGAGCTGC +
Preference number: 2 (lower is better)
Translates to: FHWKQYPSSRSRTPLGSDIYHNK*DQGTSC
Trigger: GCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGAT...ATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAATTTTGCCGGAAACACTaGTCAGTGCAGCTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQFCRKH*SVQLGS
Trigger: ACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAA...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATTCAGTCAGCTCGTGCTaGAAGTCTGAATTCGTTCCG +
Preference number: 2 (lower is better)
Translates to: IRNNIFSQARISEQCSKDSVSSC*KSEFVP
Trigger: CGGAACGAATTCAGACTTCCAGCACGAGCTGACTGA...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp ACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTATCATAAATTCTGCCTTCTaGGACATGAAAAACTTCAGC +
Preference number: 2 (lower is better)
Translates to: TTHLRKATSIPSCYSHPIINSAF*DMKNFS
Trigger: GCTGAAGTTTTTCATGTCCCAGAAGGCAGAATTTAT...GATAGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR GCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGTTTAGAGATAACTTCTaGAAAGCTCCTGTTATACAG +
Preference number: 2 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKFRDNF*KAPVIQ
Trigger: CTGTATAACAGGAGCTTTGCAGAAGTTATCTCTAAA...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCACCTATTTCTTTTACCTaGTCCACCGTCAATAATCCA +
Preference number: 2 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPPISFT*STVNNP
Trigger: TGGATTATTGACGGTGGAGCAGGTAAAAGAAATAGG...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTATAAGCCAATTCAAATaGTCCTCTGTGCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIISQFK*SSVPGL
Trigger: CAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTAT...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTCAGATGCCAACAGTaGCTGTATGTAGAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPFRCQQ*LYVERN
Trigger: ATTCCTTTCTACATACAGGCACTGTTGGCATCTGAA...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATTCAACAAATCCATTCTaGCTTTCTTTGGTTCAGATG +
Preference number: 2 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNSTNPF*LSLVQM
Trigger: CATCTGAACCAAAGAAAGGCAGAATGGATTTGTTGA...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCTATGTTCAACTCCTATaGACTCTACCAAACAACCAA +
Preference number: 2 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSYVQLL*TLPNNQ
Trigger: TTGGTTGTTTGGTAGAGTGCATAGGAGTTGAACATA...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp ACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTATCTGGAAACAATTTCTGTaGTCCGATTACTTTCACAAA +
Preference number: 2 (lower is better)
Translates to: TTHLRKATSIPSCYSHPIWKQFL*SDYFHK
Trigger: TTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCA...GATAGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR GCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAGTGTCAGTAGGGCCATaGACTCCAGAGGCTCTAAAA +
Preference number: 2 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEVSVGP*TPEALK
Trigger: TTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACAC...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR TCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAATGGAGAAGTGTCCCATaGATGTGGTTTTGCCGGAAA +
Preference number: 2 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQWRSVP*MWFCRK
Trigger: TTTCCGGCAAAACCACATTCATGGGACACTTCTCCA...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCTCAAATGCTCCTCTGTaGCTGGACTGCAAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: KREKNSLPVILFVLECSSSNAPL*LDCKRC
Trigger: ACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGA...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGCCTTGCTTTATTCTTaGATCAGACACGAGGTTCTC +
Preference number: 2 (lower is better)
Translates to: NIRNNIFSQARISEQCSKALLYS*IRHEVL
Trigger: GAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGC...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAAGCTCCTGTTATACAGTaGACTCGCCCATACATTGGA +
Preference number: 2 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQAPVIQ*TRPYIG
Trigger: TCCAATGTATGGGCGAGTCCACTGTATAACAGGAGC...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTATCTATCATAACAAATaGGACCAAGGCACGAGCTGC +
Preference number: 2 (lower is better)
Translates to: RNNIFSQARISEQCSKDIIYHNK*DQGTSC
Trigger: GCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGAT...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTAATTCGTTCCGTGTTTaGAGTCTGAGTAGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: RNNIFSQARISEQCSKDINSFRV*SLSRLA
Trigger: TGCAAGCCTACTCAGACTCCAAACACGGAACGAATT...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp ACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCACAAGTCTCATGCCACTaGTCAATCCAAGAACTCTCA +
Preference number: 2 (lower is better)
Translates to: TAFLPWKQFLCSDYFHKAQVSCH*SIQELS
Trigger: TGAGAGTTCTTGGATTGACCAGTGGCATGAGACTTG...TGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCAGGATATTTAAAGCATaGACCTGGGGGACTGTACTC +
Preference number: 2 (lower is better)
Translates to: KREKNSLPVILFVLECSSRIFKA*TWGTVL
Trigger: GAGTACAGTCCCCCAGGTTCATGCTTTAAATATCCT...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCATGGAAATGCTGCTGCTaGCTGAAGCAGAGAATTTTC +
Preference number: 2 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPWKCCC*LKQRIF
Trigger: GAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCA...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCCATACCAGCACCATCTaGGCAGTTACATCACATGTT +
Preference number: 2 (lower is better)
Translates to: KREKNSLPVILFVLECSSHTSTI*AVTSHV
Trigger: AACATGTGATGTAACTGCGCAGATGGTGCTGGTATG...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTGTGAGCCGGTGCATTTaGAGAAGGTTTTTGAACATG +
Preference number: 2 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIVSRCI*RRFLNM
Trigger: CATGTTCAAAAACCTTCTCCAAATGCACCGGCTCAC...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTAGAGAATTTTCAGCCTaGGATACTTCTTCCTCAAGA +
Preference number: 2 (lower is better)
Translates to: RNNIFSQARISEQCSKDIREFSA*DTSSSR
Trigger: TCTTGAGGAAGAAGTATCTCAGGCTGAAAATTCTCT...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGCCTATTTCTTTTACCTaGTCCACCGTCAATAATCCA +
Preference number: 2 (lower is better)
Translates to: NIRNNIFSQARISEQCSKPISFT*STVNNP
Trigger: TGGATTATTGACGGTGGAGCAGGTAAAAGAAATAGG...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATAAGGATGGGAAAGATTaGTCTTGTCCAGTTTTAGCA +
Preference number: 2 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYKDGKD*SCPVLA
Trigger: TGCTAAAACTGGACAAGAGCAATCTTTCCCATCCTT...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCAGATCCAGGAAACAATaGTTCAAAAAGACTGTTACA +
Preference number: 2 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFRSRKQ*FKKTVT
Trigger: TGTAACAGTCTTTTTGAAGCATTGTTTCCTGGATCT...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCTTAGTATCTCGAGGCTaGATCTCATTCAGAATCATC +
Preference number: 2 (lower is better)
Translates to: KREKNSLPVILFVLECSSLVSRG*ISFRII
Trigger: GATGATTCTGAATGAGATTCAGCCTCGAGATACTAA...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTAGCACAGAGTTTAGATaGAGGATCACTGCATTTAAT +
Preference number: 2 (lower is better)
Translates to: RNNIFSQARISEQCSKDISTEFR*RITAFN
Trigger: ATTAAATGCAGTGATCCTTCATCTAAACTCTGTGCT...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTTGGCTCTTTAATCTGTaGACTCAAGGTGAACAAAAC +
Preference number: 2 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIWLFNL*TQGEQN
Trigger: GTTTTGTTCACCTTGAGTTCACAGATTAAAGAGCCA...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAATTCAAAGAGGGAACTaGAATTTGACCCTCTTGAGA +
Preference number: 2 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEIQRGN*NLTLLR
Trigger: TCTCAAGAGGGTCAAATTTCAGTTCCCTCTTTGAAT...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR GCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTTTTAGAGATAACTTCTaGAAAGCTCCTGTTATACAG +
Preference number: 2 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIFRDNF*KAPVIQ
Trigger: CTGTATAACAGGAGCTTTGCAGAAGTTATCTCTAAA...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTTTCAGATGCCAACAGTaGCTGTATGTAGAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIFRCQQ*LYVERN
Trigger: ATTCCTTTCTACATACAGGCACTGTTGGCATCTGAA...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTTTTCTTTGGTTCAGATaGCAACAGTGCCTGTATGTA +
Preference number: 2 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIFLWFR*QQCLYV
Trigger: TACATACAGGCACTGTTGGCATCTGAACCAAAGAAA...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTTATGTTCAACTCCTATaGACTCTACCAAACAACCAA +
Preference number: 2 (lower is better)
Translates to: RNNIFSQARISEQCSKDIYVQLL*TLPNNQ
Trigger: TTGGTTGTTTGGTAGAGTGCATAGGAGTTGAACATA...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR TCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATATTAGTATCTCGAGGCTaGATCTCATTCAGAATCATC +
Preference number: 2 (lower is better)
Translates to: IPLVFGNDQHQYHDSADILVSRG*ISFRII
Trigger: GATGATTCTGAATGAGATTCAGCCTCGAGATACTAA...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR GCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTGTTCAACATGTTTCCTaGAGATTTAGTGGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIVQHVS*RFSGGK
Trigger: TTTTCCTCCACTAAATCTGCAGGAAACATGTTGAAC...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR GCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAATTACCACATACTTGGTaGTTAAAACCACAGAAACCT +
Preference number: 2 (lower is better)
Translates to: SFISHTLRCSYNCFKCAELPHTW*LKPQKP
Trigger: AGGTTTCTGTGGTTTTAAGCACCAAGTATGTGGTAA...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CCA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATCATTCCATTAGTGTTTaGAAACGACCAACATCAATA +
Preference number: 2 (lower is better)
Translates to: IRNNIFSQARISEQCSKDHSISV*KRPTSI
Trigger: TATTGATGTTGGTCGTTTCCAAACACTAATGGAATG...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR GCA 72 bp AGCAGGATGGGCAGTCCAGGGGCCAACTGGTCCCACTaGTGGAGCAGATCACACAGGACGGCCAGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SRMGSPGANWSH*WSRSHRTARAR
Trigger: CCTGGCCCTGGCCGTCCTGTGTGATCTGCTCCAGCAGTGGGACCAGTTGGCCCCTGGACTGCCCATCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 72 bp AGCCATCCCAGCAGGATGGGCAGTCCAGGGGCCAACTaGTCCCACTGCTGGAGCAGATCACACAGGACGGCC +
Preference number: 3 (lower is better)
Translates to: SHPSRMGSPGAN*SHCWSRSHRTA
Trigger: GGCCGTCCTGTGTGATCTGCTCCAGCAGTGGGACCAGTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 72 bp GGTCATCACTCTCTCCCAACAGCCATCCCAGCAGGATaGGCAGTCCAGGGGCCAACTGGTCCCACTGCTGGA +
Preference number: 3 (lower is better)
Translates to: GHHSLPTAIPAG*AVQGPTGPTAG
Trigger: TCCAGCAGTGGGACCAGTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGAGAGTGATGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 72 bp CAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATaGTTCCGTTCTGCCAGTCCAACATGGCAAGTGTCC +
Preference number: 3 (lower is better)
Translates to: QYPRAGPPHSDP*FRSASPTWQVS
Trigger: GGACACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR GCA 72 bp GCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATaGCAATCTCTACCTACGCTGTCGCACTGCCTCCTC +
Preference number: 3 (lower is better)
Translates to: AAAGIPWPVAIS*QSLPTLSHCLL
Trigger: GAGGAGGCAGTGCGACAGCGTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR GCA 72 bp GCCAGCCGGACTTTGAGAGGAGACAGAAGAGGTGCTTaGAGAGGTATTTCACAAAGATCAGGGTCTCGGCCC +
Preference number: 3 (lower is better)
Translates to: ASRTLRGDRRGA*RGISQRSGSRP
Trigger: GGGCCGAGACCCTGATCTTTGTGAAATACCTCTGCAAGCACCTCTTCTGTCTCCTCTCAAAGTCCGGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 72 bp CACTCCGACCCATGCTTCCGTTCTGCCAGTCCAACATaGCAAGTGTCCCCTGACAGAGGAATAAGACAGCTG +
Preference number: 3 (lower is better)
Translates to: HSDPCFRSASPT*QVSPDRGIRQL
Trigger: CAGCTGTCTTATTCCTCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGGTCGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR CCA 72 bp ACACTAACACATGCGCCTCTTCTGGAGCTACTCTGGTaGAACTTACAGAGGACCTACGGAGGGCCTTTGCAG +
Preference number: 3 (lower is better)
Translates to: TLTHAPLLELLW*NLQRTYGGPLQ
Trigger: CTGCAAAGGCCCTCCGTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTGTTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR CAA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGCTGTTCTGGCAGCTTTaGCAGACTCACATTTGGGCA +
Preference number: 3 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTELFWQL*QTHIWA
Trigger: TGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACAG...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR TCA 72 bp CTCTCTGAAGAACTGAGACAGGAGGTGGCACTGCTCTaGCACCATCCTTTGAAGGTGACAGAGCATCTCAGG +
Preference number: 3 (lower is better)
Translates to: LSEELRQEVALL*HHPLKVTEHLR
Trigger: CCTGAGATGCTCTGTCACCTTCAAAGGATGGTGTCAGAGCAGTGCCACCTCCTGTCTCAGTTCTTCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 72 bp CCTTCATGGCCAACAATAAGAACTTCTCTCCCATGTTaGACAGCAAGGGTGGCACGCCCTTCTCTCCAAGTC +
Preference number: 3 (lower is better)
Translates to: PSWPTIRTSLPC*TARVARPSLQV
Trigger: GACTTGGAGAGAAGGGCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTTCTTATTGTTGGCCATGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 72 bp GTAACACTAACACATGCGCCTCTTCTGGAGCTACTCTaGTGGAACTTACAGAGGACCTACGGAGGGCCTTTG +
Preference number: 3 (lower is better)
Translates to: VTLTHAPLLELL*WNLQRTYGGPL
Trigger: CAAAGGCCCTCCGTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTGTTAGTGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CCA 72 bp GGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTaGGGTCAGATGGACACAGTGCTCCGTCTGGGGAAG +
Preference number: 3 (lower is better)
Translates to: GSNIHRPDQELL*GQMDTVLRLGK
Trigger: CTTCCCCAGACGGAGCACTGTGTCCATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CAA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAAAAGAGAACAGATCTGTaGCCGCACTCCTGGAGACTG +
Preference number: 3 (lower is better)
Translates to: HAESRRSTIHRGSVESLQKRTDL*PHSWRL
Trigger: CAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTT...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp CTAACACATGCGCCTCTTCTGGAGCTACTCTGGTGGAACTTACAGAGGACCTACAAGAGAACAGATCTGTaGCCGCACTCCTGGAGACTG +
Preference number: 3 (lower is better)
Translates to: LTHAPLLELLWWNLQRTYKRTDL*PHSWRL
Trigger: CAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTT...GTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTGTTAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR CAA 90 bp GCTGAGCAGGATATTTTCCTGTTTGACCACAGTCAACGAAGACAGCACAAGCAAAGGCAGGAGAATCGCTaGAACCCAGCAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: AEQDIFLFDHSQRRQHKQRQENR*NPAGGG
Trigger: ACCTCCGCCTGCTGGGTTCAAGCGATTCTCCTGCCT...TTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR-3UTR CAA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGAGCCTTGCTTTATTCTaGCATCAGACACGAGGTTCT +
Preference number: 3 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTESLALF*HQTRGS
Trigger: AGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCT...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR TCA 72 bp CAGTGCCTGCTCAAGCCTACAGCAATCTCTAATCTCTaGGTTGCCACGGCACCTAAGAGTCTGTACCACATG +
Preference number: 3 (lower is better)
Translates to: QCLLKPTAISNL*VATAPKSLYHM
Trigger: CATGTGGTACAGACTCTTAGGTGCCGTGGCAACTCAGAGATTAGAGATTGCTGTAGGCTTGAGCAGGCACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR GCA 72 bp ACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTaGTATTCACACCCTATCTGTCCCTCAGTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: TTHLRKATSIPS*YSHPICPSVPA
Trigger: AGCAGGCACTGAGGGACAGATAGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CCA 72 bp CAACTCAAGAATAGGATGGGGGTTGGTGAGGAAAAGTaGTGTAGTACTGGTGAGGACTTCAACGACGGCCAG +
Preference number: 3 (lower is better)
Translates to: QLKNRMGVGEEK*CSTGEDFNDGQ
Trigger: CTGGCCGTCGTTGAAGTCCTCACCAGTACTACACCACTTTTCCTCACCAACCCCCATCCTATTCTTGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CAA 90 bp CCAACAATAAGAACTTCTCTCCCATGTTGCACAGCAAGGGTGGCACGCCCTTCTTTAGGCTCGGGGAACTaGATTCAAGGACTTGTATGG +
Preference number: 3 (lower is better)
Translates to: PTIRTSLPCCTARVARPSLGSGN*IQGLVW
Trigger: CCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAA...AGAAGGGCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTTCTTATTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CAA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAATCTCCCAGGTATCAGTaGCAGACTGAAGATGTCCAT +
Preference number: 3 (lower is better)
Translates to: HAESRRSTIHRGSVESLQSPRYQ*QTEDVH
Trigger: ATGGACATCTTCAGTCTGCAACTGATACCTGGGAGA...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCCATGGATTTTGCCTCTaGGCCAGCCAGAGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSHGFCL*ASQSLA
Trigger: AGCCAAACTCTGGCTGGCCAAGAGGCAAAATCCATG...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR TCA 72 bp TCTTGGCCAGCCAGAGTTTGGCTTTGGTACAAACAGTaGTGTCAGTCAGCTCGTGCTGGAAGTCTGAATTCG +
Preference number: 3 (lower is better)
Translates to: SWPARVWLWYKQ*CQSARAGSLNS
Trigger: CGAATTCAGACTTCCAGCACGAGCTGACTGACATCACTGTTTGTACCAAAGCCAAACTCTGGCTGGCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR TCA 72 bp GCCAGCAGCCTCAAGCAAGCCAAAGTCCTTTCCTCTTaGATGCGTAGTCTTGTGAACTCCACTGTCTTCACA +
Preference number: 3 (lower is better)
Translates to: ASSLKQAKVLSS*MRSLVNSTVFT
Trigger: TGTGAAGACAGTGGAGTTCACAAGACTACGCATTCAAGAGGAAAGGACTTTGGCTTGCTTGAGGCTGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CAA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAAAGCCAGAGTTTGGCTTaGGTACAAACAGTGATGTCA +
Preference number: 3 (lower is better)
Translates to: HAESRRSTIHRGSVESLQSQSLA*VQTVMS
Trigger: TGACATCACTGTTTGTACCAAAGCCAAACTCTGGCT...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp AGGAGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGTTTAGAGATGTCTCCCAACTATACTaGAATTCCCATTCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: RSFSTTGLHSLTNCRFRDVSQLY*NSHSGC
Trigger: ACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGAC...ATCTCTAAACCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR-3UTR CAA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCACACAGTCGTATGGTTaGGTGCTTGTGCTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSTQSYG*VLVLSS
Trigger: GGAGCTCAGCACAAGCACCAAACCATACGACTGTGT...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR TCA 72 bp AAGCTGTCACACAGTCGTATGGTTTGGTGCTTGTGCTaGGCTCCAATGCTGCCTGAAATAAGCCTTGCAGTT +
Preference number: 3 (lower is better)
Translates to: KLSHSRMVWCLC*APMLPEISLAV
Trigger: AACTGCAAGGCTTATTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR TCA 72 bp GGACTGGGCACGCAGCAGGTTTCAACAAAAACAAGCTaGTTGGTGGGCAGACAAAAAGCCATATTACATGCC +
Preference number: 3 (lower is better)
Translates to: GLGTQQVSTKTS*LVGRQKAILHA
Trigger: GGCATGTAATATGGCTTTTTGTCTGCCCACCAATCAGCTTGTTTTTGTTGAAACCTGCTGCGTGCCCAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR TCA 72 bp CCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATaGCTTTGGAAGCAAGTCTCAGAGCTACACTCTGAA +
Preference number: 3 (lower is better)
Translates to: PCSPHMSACGGK*LWKQVSELHSE
Trigger: TTCAGAGTGTAGCTCTGAGACTTGCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR GCA 72 bp ACAGTGGACTCGCCCATACATTGGAAATGCTGCTGCTaGCTGAAGCAGAGAATTTTCAGCCTGAGATACTTC +
Preference number: 3 (lower is better)
Translates to: TVDSPIHWKCCC*LKQRIFSLRYF
Trigger: GAAGTATCTCAGGCTGAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR GCA 72 bp TCGCTCACCAACTGCAGGCTGTTTAGAGATAACTTCTaGAAAGCTCCTGTTATACAGTGGACTCGCCCATAC +
Preference number: 3 (lower is better)
Translates to: SLTNCRLFRDNF*KAPVIQWTRPY
Trigger: GTATGGGCGAGTCCACTGTATAACAGGAGCTTTGCAGAAGTTATCTCTAAACAGCCTGCAGTTGGTGAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000402796.5
3UTR GCA 72 bp ACCGTCAATAATCCATCAGAAGATTCTGGCACAGGCTaGATGGGCAGAAGCTGGCACAACATGCCTAAAAGT +
Preference number: 3 (lower is better)
Translates to: TVNNPSEDSGTG*MGRSWHNMPKS
Trigger: ACTTTTAGGCATGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAGAATCTTCTGATGGATTATTGACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR GCA 72 bp TCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTaGAGACTGAAGATGTCCATGAGCTCTAGCTATTCG +
Preference number: 3 (lower is better)
Translates to: SCIRHEVLPGIS*RLKMSMSSSYS
Trigger: CGAATAGCTAGAGCTCATGGACATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR CCA 72 bp GCTTTGGTACAAACAGTGATGTCAGTCAGCTCGTGCTaGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAG +
Preference number: 3 (lower is better)
Translates to: ALVQTVMSVSSC*KSEFVPCLESE
Trigger: CTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGCACGAGCTGACTGACATCACTGTTTGTACCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCTCATCTGTAAGCGGCTaGCTGACTCTGAATCAGTGT +
Preference number: 3 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSSSVSG*LTLNQC
Trigger: ACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGA...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CAA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAAGCCAGAGTTTGGCTTaGGTACAAACAGTGATGTCA +
Preference number: 3 (lower is better)
Translates to: NLEKCPMNVVLPETLVSASQSLA*VQTVMS
Trigger: TGACATCACTGTTTGTACCAAAGCCAAACTCTGGCT...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp ATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAAGAACATGATTTTGGTTaGGTGTCTCAGAGCATCCAA +
Preference number: 3 (lower is better)
Translates to: MNVVLPETLVSAAGECGQEHDFG*VSQSIQ
Trigger: TTGGATGCTCTGAGACACCAAACCAAAATCATGTTC...TTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp TGTCACACAGTCGTATGGTTTGGTGCTTGTGCTGAGCTCCAATGCTGCCTGAAATTTCCAAGAGGTCACTaGCATAAGGTACCAATGACT +
Preference number: 3 (lower is better)
Translates to: CHTVVWFGACAELQCCLKFPRGH*HKVPMT
Trigger: AGTCATTGGTACCTTATGCAAGTGACCTCTTGGAAA...TTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR GCA 72 bp TGTTATACAGTGGACTCGCCCATACATTGGAAATGCTaGTGCTGCCTGAAGCAGAGAATTTTCAGCCTGAGA +
Preference number: 3 (lower is better)
Translates to: CYTVDSPIHWKC*CCLKQRIFSLR
Trigger: TCTCAGGCTGAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTCCACTGTATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR GCA 72 bp TTGGCTTTGGTACAAACAGTGATGTCAGTCAGCTCGTaGTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: LALVQTVMSVSS*WKSEFVPCLES
Trigger: AGACTCCAAACACGGAACGAATTCAGACTTCCAGCACGAGCTGACTGACATCACTGTTTGTACCAAAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR GCA 72 bp GCCATCTCATGCCAATCTCTACCTACGCTGTCGCACTaGCTCCTCTTTCTTTTGTTTGTCAAATCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: AISCQSLPTLSH*LLFLLFVKSLS
Trigger: AGAGAGAGATTTGACAAACAAAAGAAAGAGGAGGCAGTGCGACAGCGTAGGTAGAGATTGGCATGAGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CCA 72 bp CAAAGCTCCTGTTATACAGTGGACTCGCCCATACATTaGAAATGCTGCTGCTGCCTGAAGCAGAGAATTTTC +
Preference number: 3 (lower is better)
Translates to: QSSCYTVDSPIH*KCCCCLKQRIF
Trigger: GAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTCCACTGTATAACAGGAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CCA 72 bp GCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTaGTGGGAAATGACTTTGGAAGCAAGTCTCAGAGCT +
Preference number: 3 (lower is better)
Translates to: AINSLFSTHVCM*WEMTLEASLRA
Trigger: AGCTCTGAGACTTGCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CAA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTTCATCTGTAAGCGGCTaGCTGACTCTGAATCAGTGT +
Preference number: 3 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVSSVSG*LTLNQC
Trigger: ACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGA...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATCACCTGTCTACTGTATaGGCTACAGTTTCCAACTGT +
Preference number: 3 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNHLSTV*ATVSNC
Trigger: ACAGTTGGAAACTGTAGCCAATACAGTAGACAGGTG...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402796.5
3UTR-3UTR CAA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGTGCATTACCTCCCAGTaGTCTAACATAATTACGATG +
Preference number: 3 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRCITSQ*SNIITM
Trigger: CATCGTAATTATGTTAGACAACTGGGAGGTAATGCA...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR GCA 72 bp TCAGGGACGAAATCTGCACCTTCCACAGTGAGCCGGTaGATTTGGAGAAGGTTTTTGAACATGATTTTGGTT +
Preference number: 3 (lower is better)
Translates to: SGTKSAPSTVSR*IWRRFLNMILV
Trigger: AACCAAAATCATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTCGTCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR GCA 72 bp CACAAAGATCAGGGTCTCGGCCCAAAAGTTGACTTCTaGTTTTTCAAACAGGTAGTCTTCTTCCACCTGATG +
Preference number: 3 (lower is better)
Translates to: HKDQGLGPKVDF*FFKQVVFFHLM
Trigger: CATCAGGTGGAAGAAGACTACCTGTTTGAAAAAGCAGAAGTCAACTTTTGGGCCGAGACCCTGATCTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CCA 72 bp TTTAGAGATAACTTCTGCAAAGCTCCTGTTATACAGTaGACTCGCCCATACATTGGAAATGCTGCTGCTGCC +
Preference number: 3 (lower is better)
Translates to: FRDNFCKAPVIQ*TRPYIGNAAAA
Trigger: GGCAGCAGCAGCATTTCCAATGTATGGGCGAGTCCACTGTATAACAGGAGCTTTGCAGAAGTTATCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CCA 72 bp TCAATAATCCATCAGAAGATTCTGGCACAGGCTGCATaGGCAGAAGCTGGCACAACATGCCTAAAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: SIIHQKILAQAA*AEAGTTCLKVK
Trigger: CTTTACTTTTAGGCATGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAGAATCTTCTGATGGATTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CCA 72 bp TCGAATGGTATTAGGAATGTGATCTATCATAACAAATaGGACCAAGGCACGAGCTGCCATTTCACGGGAGTG +
Preference number: 3 (lower is better)
Translates to: SNGIRNVIYHNK*DQGTSCHFTGV
Trigger: CACTCCCGTGAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CCA 72 bp TCAGCTCGTGCTGGAAGTCTGAATTCGTTCCGTGTTTaGAGTCTGAGTAGGCTTGCAACAAATGAAAAACCT +
Preference number: 3 (lower is better)
Translates to: SARAGSLNSFRV*SLSRLATNEKP
Trigger: AGGTTTTTCATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGCACGAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR TCA 72 bp TATCCTACCACCACCAGAGTCCTGCAACACAGATTTTaGACATGGCATTACAGAGAGGACTCCCTGTATATT +
Preference number: 3 (lower is better)
Translates to: YPTTTRVLQHRF*TWHYREDSLYI
Trigger: AATATACAGGGAGTCCTCTCTGTAATGCCATGTTCAAAATCTGTGTTGCAGGACTCTGGTGGTGGTAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR GCA 72 bp TCTAAAACACTCCATAGCCACTGTTCTGGCAGCTTTTaGAGACTCACATTTGGGCACCTGTTTAGTACTTCA +
Preference number: 3 (lower is better)
Translates to: SKTLHSHCSGSF*RLTFGHLFSTS
Trigger: TGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACAGTGGCTATGGAGTGTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR GCA 72 bp TTTGCAGTTAACACTATCCTACCACCACCAGAGTCCTaGAACACAGATTTTGAACATGGCATTACAGAGAGG +
Preference number: 3 (lower is better)
Translates to: FAVNTILPPPES*NTDFEHGITER
Trigger: CCTCTCTGTAATGCCATGTTCAAAATCTGTGTTGCAGGACTCTGGTGGTGGTAGGATAGTGTTAACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CCA 72 bp ACGAAATCTGCACCTTCCACAGTGAGCCGGTGCATTTaGAGAAGGTTTTTGAACATGATTTTGGTTTGGTGT +
Preference number: 3 (lower is better)
Translates to: TKSAPSTVSRCI*RRFLNMILVWC
Trigger: ACACCAAACCAAAATCATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACAGTCTCCCAACTATACTaGAATTCCCATTCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETVSQLY*NSHSGC
Trigger: ACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGAC...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGTAAGAGAAACATGCTaGGATGACGATTTGGTTCTC +
Preference number: 3 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFVRETC*DDDLVL
Trigger: GAGAACCAAATCGTCATCCAAGCATGTTTCTCTTAC...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR TCA 72 bp ATGCTTTGTAGATTTCACCAGAGAAGTCACTTGCCCTaGACCTTCTCTTCCTCTGTGAGCCTTTTGAATACT +
Preference number: 3 (lower is better)
Translates to: MLCRFHQRSHLP*TFSSSVSLLNT
Trigger: AGTATTCAAAAGGCTCACAGAGGAAGAGAAGGTTCAGGGCAAGTGACTTCTCTGGTGAAATCTACAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR TCA 72 bp GGTATTTCACAAAGATCAGGGTCTCGGCCCAAAAGTTaGCTTCTGCTTTTTCAAACAGGTAGTCTTCTTCCA +
Preference number: 3 (lower is better)
Translates to: GISQRSGSRPKS*LLLFQTGSLLP
Trigger: TGGAAGAAGACTACCTGTTTGAAAAAGCAGAAGTCAACTTTTGGGCCGAGACCCTGATCTTTGTGAAATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR-3UTR CAA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTCCATTCTGCCTTTCTTaGGTTCAGATGCCAACAGTG +
Preference number: 3 (lower is better)
Translates to: RNNIFSQARISEQCSKDIPFCLS*VQMPTV
Trigger: CACTGTTGGCATCTGAACCAAAGAAAGGCAGAATGG...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACATTCTCTGGTTCACGTTaGGATTTACTCTGCTCCAAT +
Preference number: 3 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETFSGSR*DLLCSN
Trigger: ATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGAA...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCATCATCTGTAAGCGGCTaGCTGACTCTGAATCAGTGT +
Preference number: 3 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPSSVSG*LTLNQC
Trigger: ACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGA...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGAGCCTTGCTTTATTCTaGCATCAGACACGAGGTTCT +
Preference number: 3 (lower is better)
Translates to: NIRNNIFSQARISEQCSKSLALF*HQTRGS
Trigger: AGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCT...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTTTTGCAGACTCACATTaGGGCACCTGTTTAGTACTT +
Preference number: 3 (lower is better)
Translates to: RNNIFSQARISEQCSKDIFADSH*GTCLVL
Trigger: AAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAA...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR TCA 72 bp GCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTaGGTTTCACAAAACCAGTATAAGCCAATTCAAATG +
Preference number: 3 (lower is better)
Translates to: ADSHLGTCLVLQ*VSQNQYKPIQM
Trigger: CATTTGAATTGGCTTATACTGGTTTTGTGAAACTCACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CCA 72 bp AGTTTCCAACTGTTTGAGAAGAAAAGGATAGAGTTCTaGGAAACGAGAGAAAAACTCTCTCCCTGTCATTCT +
Preference number: 3 (lower is better)
Translates to: SFQLFEKKRIEF*ETREKLSPCHS
Trigger: AGAATGACAGGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAGTTGGAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
3UTR CCA 72 bp GGTGCTGTTTGGTTAACTCATTCTCTGGTTCACGTTTaGATTTACTCTGCTCCAATTTATAAAGTACCTGAG +
Preference number: 3 (lower is better)
Translates to: GAVWLTHSLVHV*IYSAPIYKVPE
Trigger: CTCAGGTACTTTATAAATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGAATGAGTTAACCAAACAGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR-3UTR CAA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGTGGGAAAGATTGCTCTaGTCCAGTTTTAGCATCAAT +
Preference number: 3 (lower is better)
Translates to: NIRNNIFSQARISEQCSKWERLL*SSFSIN
Trigger: ATTGATGCTAAAACTGGACAAGAGCAATCTTTCCCA...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTTTCTCTGGTTCACGTTaGGATTTACTCTGCTCCAAT +
Preference number: 3 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIFSGSR*DLLCSN
Trigger: ATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGAA...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR-3UTR CAA 90 bp CACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCAAATCATCAGGAAAAGGATATTTTCCTGTTaGACCACAGTCAACGAAGAC +
Preference number: 3 (lower is better)
Translates to: HLCNIPAKMYSMNQIIRKRIFSC*TTVNED
Trigger: GTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCT...TTTCCTGATGATTTGATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR TCA 72 bp TCTGAGTTGCCACGGCACCTAAGAGTCTGTACCACATaGTTTAGTCAATTACTGCCTTTCATTGTTATAATA +
Preference number: 3 (lower is better)
Translates to: SELPRHLRVCTT*FSQLLPFIVII
Trigger: TATTATAACAATGAAAGGCAGTAATTGACTAAATCATGTGGTACAGACTCTTAGGTGCCGTGGCAACTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR TCA 72 bp AAGCTAAAAAGAGGCATAATAACAAAACGCAATGCGTaGTCTAGGATTGCTTCCCAGATTGTAGGAAGCTTT +
Preference number: 3 (lower is better)
Translates to: KLKRGIITKRNA*SRIASQIVGSF
Trigger: AAAGCTTCCTACAATCTGGGAAGCAATCCTAGATCACGCATTGCGTTTTGTTATTATGCCTCTTTTTAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR GCA 72 bp GAATCCACTGCATTTCTTCCATGGAAACAATTTCTGTaGTCCGATTACTTTCACAAAGCAAGCCTAATGTAT +
Preference number: 3 (lower is better)
Translates to: ESTAFLPWKQFL*SDYFHKASLMY
Trigger: ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR GCA 72 bp AATAGGATGCCCTGTGAAGAACACCATTATCACCTATaGAACATTCCTGCAAAAATGTACAGCATGAATCAA +
Preference number: 3 (lower is better)
Translates to: NRMPCEEHHYHL*NIPAKMYSMNQ
Trigger: TTGATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTCACAGGGCATCCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR GCA 72 bp ACGCTTCAGCCTAGTTTTATTTCCCACACACTTAGATaGAGCTACAACTGCTTTAAATGTGCAGAAAACTTT +
Preference number: 3 (lower is better)
Translates to: TLQPSFISHTLR*SYNCFKCAENF
Trigger: AAAGTTTTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACTAGGCTGAAGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR GCA 72 bp TTTAAAAGTAATGCCTGCAGTATGGCTTGCTCCATTTaGATTACCTCCCAGTTGTCTAACATAATTACGATG +
Preference number: 3 (lower is better)
Translates to: FKSNACSMACSI*ITSQLSNIITM
Trigger: CATCGTAATTATGTTAGACAACTGGGAGGTAATGCAAATGGAGCAAGCCATACTGCAGGCATTACTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CCA 72 bp GTAAGGTTTGCATTCACAGCTTCTAAAGATTTGATGTaGATGTGTTTTAGAGACCATTTTTCAGCCTGCCAT +
Preference number: 3 (lower is better)
Translates to: VRFAFTASKDLM*MCFRDHFSACH
Trigger: ATGGCAGGCTGAAAAATGGTCTCTAAAACACATCCACATCAAATCTTTAGAAGCTGTGAATGCAAACCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR GCA 72 bp ATGAAATTCTTATACTGCTGTAAAGAAACAGAAGGGTaGTGTTTGGTTAACTCATTCTCTGGTTCACGTTTG +
Preference number: 3 (lower is better)
Translates to: MKFLYCCKETEG*CLVNSFSGSRL
Trigger: CAAACGTGAACCAGAGAATGAGTTAACCAAACAGCACCCTTCTGTTTCTTTACAGCAGTATAAGAATTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp TCATCACTCTCTCCCAACAGCCATCCCAGCAGGATGGGCAGTCCAGGGGCCAACGTACTGGGGCAGGCCTaGCACCTTGAAGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSLSPNSHPSRMGSPGANVLGQA*HLEGPR
Trigger: CCTTGGGCCTTCAAGGTGCCAGGCCTGCCCCAGTAC...GTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGAGAGTGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACCCAGCAGGCGGAGGTTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: SSCRHSMACSHLMPISTYPAGGG*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACCTCCGCCTGCTGG...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTAGAGTCGCAGGCGCCTaGTCCAGTCCCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEARVAGA*SSPGSR
Trigger: CCTGCTTCCGGGACTGGACCAGGCGCCTGCGACTCT...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGCAGTGTCCATTGGGATaGGGCCTTCAGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTEQCPLG*GLQGMS
Trigger: GCTCATCCCCTGAAGGCCTCATCCCAATGGACACTG...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CAA 72 bp ACACCATCCTTTGAAGGTGACAGAGCATCTCAGGGCTaGGGGGACGCCAGCCGGACTTTGAGAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: TPSFEGDRASQG*GDASRTLRGDR
Trigger: TCTGTCTCCTCTCAAAGTCCGGCTGGCGTCCCCCAAGCCCTGAGATGCTCTGTCACCTTCAAAGGATGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp CAAAACATGTGCAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATGCTTCCCCCATGCTTCCGTTCTaGCAGTCCAACATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: QNMCSIQEQGLPTPTHASPMLPF*QSNMAS
Trigger: ACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGG...GGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTGCACATGTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACCCCACTCCGACCCATaGTTCCGTTCTGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: MNVVLPETLVSAAGECGQPHSDP*FRSASP
Trigger: TGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGG...TTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGCCATCAAAGCTCCCAGGAGCATCTCAGGGCTTaGGGGACGCCAGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: LKMSMSSSYSQTCHQSSQEHLRA*GTPAGL
Trigger: AAGTCCGGCTGGCGTCCCCCAAGCCCTGAGATGCTC...CTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGTAGCGGCATGCGCCTaGAGTCCCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPVAACA*SPSYSG
Trigger: TCCCGAGTAGCTGGGACTTCAGGCGCATGCCGCTAC...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACCCAGCTTCTAGCAGCTaGAGGCATTCCATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSCRHSMACSHLMPISTYPASSS*RHSMAC
Trigger: ACAGGCCATGGAATGCCTGCAGCTGCTAGAAGCTGG...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGCTATCTGTCCCTCAGTaGCTGCTCAAGCCTACAGCA +
Preference number: 4 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTELSVPQ*LLKPTA
Trigger: TGCTGTAGGCTTGAGCAGGCACTGAGGGACAGATAG...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGCCAGGGCCAGAGCGATaGAGGCATCCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKPGPER*RHPPGR
Trigger: TCTGCCAGGTGGATGCCTCCATCGCTCTGGCCCTGG...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp CTCGAGGCTGAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATAGAGTCGCAGGCGCCTaGTCCAGTCCCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LEAESHSESSVSGLLTLNRVAGA*SSPGSR
Trigger: CCTGCTTCCGGGACTGGACCAGGCGCCTGCGACTCT...ATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTCAGCCTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTGTGCACGTCGGCGTCTaGGAAGAGTCGCAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGVHVGV*EESQAP
Trigger: AGGCGCCTGCGACTCTTCTCAGACGCCGACGTGCAC...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGCCATCAAAGCTCCCAGACGCCAGCCGGACTTTaGGAGGAGACAGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LKMSMSSSYSQTCHQSSQTPAGL*EETEEV
Trigger: CACCTCTTCTGTCTCCTCTCAAAGTCCGGCTGGCGT...CTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGATTCTGGCACAGGCTaGATGGGCAGAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NLEKCPMNVVLPETLVSADSGTG*MGRSWH
Trigger: GTGCCAGCTTCTGCCCATGCAGCCTGTGCCAGAATC...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTCTCTCCACTCTTGGCTaGCGCGGCCCACACTGCAGC +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVLSTLG*RGPHCS
Trigger: GCTGCAGTGTGGGCCGCGGCAGCCAAGAGTGGAGAG...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGTCAGATGGACACAGTaGTCCGTCTGGGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: NLEKCPMNVVLPETLVSAVRWTQ*SVWGSH
Trigger: GTGGCTTCCCCAGACGGAGCACTGTGTCCATCTGAC...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCCAACTGGTCCCACTaGTGGAGCAGATCACACAGG +
Preference number: 4 (lower is better)
Translates to: NLEKCPMNVVLPETLVSAANWSH*WSRSHR
Trigger: CCTGTGTGATCTGCTCCAGCAGTGGGACCAGTTGGC...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAAACTGGTCAGTGCAGCTaGGGAGTGTGGACAACAGAG +
Preference number: 4 (lower is better)
Translates to: HAESRRSTIHRGSVESLQTGQCS*GVWTTE
Trigger: CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGT...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTACCACTCGGGGACACTaGTGCAGTCCACTGAACGAA +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEATTRGH*CSPLNE
Trigger: TTCGTTCAGTGGACTGCACCAGTGTCCCCGAGTGGT...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGGCCATCCCAGCAGGATaGGCAGTCCAGGGGCCAACT +
Preference number: 4 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVAIPAG*AVQGPT
Trigger: AGTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGC...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CAA 72 bp CTCTGGTGGAACTTACAGAGGACCTACGGAGGGCCTTaGCAGTTAACACTATCCTACCACCACCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LWWNLQRTYGGP*QLTLSYHHQSP
Trigger: AGGACTCTGGTGGTGGTAGGATAGTGTTAACTGCAAAGGCCCTCCGTAGGTCCTCTGTAAGTTCCACCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp TGCTCAAGCCTACAGCAATCTCTAATCTCTGAGTTGCCACGGCACCTAAGAGTCGGGATGAGCTCTGAATaGCTGGAGACACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: CSSLQQSLISELPRHLRVGMSSE*LETPQW
Trigger: CCACTGTGGTGTCTCCAGTCATTCAGAGCTCATCCC...GACTCTTAGGTGCCGTGGCAACTCAGAGATTAGAGATTGCTGTAGGCTTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACAGTGCACGTCGGCGTCTaGGAAGAGTCGCAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETVHVGV*EESQAP
Trigger: AGGCGCCTGCGACTCTTCTCAGACGCCGACGTGCAC...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TCATCACTCTCTCCCAACAGCCATCCCAGCAGGATGGGCAGTCCAGGGGCCAACCTCAGAGCTACACTCTaGATTTCAGATCTTTCATTG +
Preference number: 4 (lower is better)
Translates to: SSLSPNSHPSRMGSPGANLRATL*ISDLSL
Trigger: CAATGAAAGATCTGAAATTCAGAGTGTAGCTCTGAG...GTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGAGAGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGGAAGCAGCACACAAATaGGGAATCTTTTCAGACGGG +
Preference number: 4 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTEEAAHK*GIFSDG
Trigger: CCCGTCTGAAAAGATTCCTCATTTGTGTGCTGCTTC...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAAAGAGAACAGATCTGTTaGCGCACTCCTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: MNVVLPETLVSAAGECGQREQIC*RTPGDW
Trigger: CCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCT...TTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTGATTCTGGCACAGGCTaGATGGGCAGAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELDSGTG*MGRSWH
Trigger: GTGCCAGCTTCTGCCCATGCAGCCTGTGCCAGAATC...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TCATCACTCTCTCCCAACAGCCATCCCAGCAGGATGGGCAGTCCAGGGGCCAACTTTCTTTGGTTCAGATaGCAACAGTGCCTGTATGTA +
Preference number: 4 (lower is better)
Translates to: SSLSPNSHPSRMGSPGANFLWFR*QQCLYV
Trigger: TACATACAGGCACTGTTGGCATCTGAACCAAAGAAA...GTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGAGAGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCCCATGCTTCCGTTCTaGCAGTCCAACATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEAPMLPF*QSNMAS
Trigger: ACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGG...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGGACGGTAGAGCATCCTaGCAGATTAAGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTEDGRAS*QIKKFS
Trigger: GCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTC...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTTGTCCTGATTTCTCGTaGACGTCGGCGTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEACPDFS*TSASEK
Trigger: CTTCTCAGACGCCGACGTGCACGAGAAATCAGGACA...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAATGCAGCTGGGGAGTGTaGACAACAGAGTTCGAATGG +
Preference number: 4 (lower is better)
Translates to: HAESRRSTIHRGSVESLQCSWGV*TTEFEW
Trigger: CCATTCGAACTCTGTTGTCCACACTCCCCAGCTGCA...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp GAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACACCAATTTTGCCGGAAACACTaGTCAGTGCAGCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ESRRSTIHRGSVESLQHQFCRKH*SVQLGS
Trigger: ACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAA...TTGGTGTTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTTCTGCCAGTCCAACATaGCAAGTGTCCCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEASASPT*QVSPDR
Trigger: TCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGA...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCAGTCCAGGGGCCAACTaGTCCCACTGCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSSPGAN*SHCWSR
Trigger: TCTGCTCCAGCAGTGGGACCAGTTGGCCCCTGGACT...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCACTGCACCTTCCACAGTaGGCCGGTGCATTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIALHLPQ*AGAFGE
Trigger: TTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAG...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGCTGCACCTTCCACAGTaGGCCGGTGCATTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKLHLPQ*AGAFGE
Trigger: TTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAG...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCACACTGCCCAGACCGGTaGTGTAAAACCCAGAATTGC +
Preference number: 4 (lower is better)
Translates to: NLEKCPMNVVLPETLVSAHCPDR*CKTQNC
Trigger: GCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTG...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCACTGGTGCAGTCCACTaGACGAAGCAGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSTGAVH*TKQHTA
Trigger: AGCAGTGTGCTGCTTCGTTCAGTGGACTGCACCAGT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAAATGGCAAGTGTCCCCTaGCAGAGGAATAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: HAESRRSTIHRGSVESLQMASVP*QRNKTA
Trigger: AGCTGTCTTATTCCTCTGTCAGGGGACACTTGCCAT...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGCTGTTTAGAGATAAGAGTCCCAAACACTaGGAACTAGGGTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SFSTTGLHSLTNCRLFRDKSPKH*ELGCLP
Trigger: GGGAAGACACCCTAGTTCTCAGTGTTTGGGACTCTT...ATCTCTAAACAGCCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp GCTGAGCAGGATATTTTCCTGTTTGACCACAGTCAACGAAGACAGCACAAGCAAGACAGGAGAACTGCTTaGACCCAGGAGGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: AEQDIFLFDHSQRRQHKQDRRTA*TQEAEV
Trigger: GACCTCTGCCTCCTGGGTTCAAGCAGTTCTCCTGTC...TTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp CAAAACATGTGCAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATGCTTCCCTGCAACACAGATTTTaGACATGGCATTACAGAGAG +
Preference number: 4 (lower is better)
Translates to: QNMCSIQEQGLPTPTHASLQHRF*TWHYRE
Trigger: CTCTCTGTAATGCCATGTTCAAAATCTGTGTTGCAG...GGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTGCACATGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp CTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGCCATCAAAGCTCCCAGATCAGGGACGAAATCTaGACCTTCCACAGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: LKMSMSSSYSQTCHQSSQIRDEI*TFHSEP
Trigger: CGGCTCACTGTGGAAGGTGCAGATTTCGTCCCTGAT...CTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TGCTCAAGCCTACAGCAATCTCTAATCTCTGAGTTGCCACGGCACCTAAGAGTCAGAGAACAGATCTGTTaGCGCACTCCTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: CSSLQQSLISELPRHLRVREQIC*RTPGDW
Trigger: CCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCT...GACTCTTAGGTGCCGTGGCAACTCAGAGATTAGAGATTGCTGTAGGCTTGAGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGATAAGCCAATTCAAATaGTCCTCTGTGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTEISQFK*SSVPGL
Trigger: CAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTAT...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTTACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTGGAAACACTGGTCAGTaGAGCTGGGGAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: LTTHLRKATSIPSCYSHPGNTGQ*SWGVWT
Trigger: TGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCC...AGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCACTCGGGGACACTGGTaGAGTCCACTGAACGAAGCA +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSTRGHW*SPLNEA
Trigger: TGCTTCGTTCAGTGGACTGCACCAGTGTCCCCGAGT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTACTTCTCTCCCATGTTaGACAGCAAGGGTGGCACGC +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELTSLPC*TARVAR
Trigger: GCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGT...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp AGGCAGACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTCACGGTTTCCGTGGCTaGATCTCTAACAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RQTRMTVEHPARLRSSAGHGFRG*ISNSLL
Trigger: GAGCAAGCTGTTAGAGATGCAGCCACGGAAACCGTG...ACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGTTCAGGCAATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRFRQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATTGCCTGAA...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp AGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGCTGTTTAGAGATCTGGAGACACCACAGTaGAAAGCCTGTAGGACATCA +
Preference number: 4 (lower is better)
Translates to: SFSTTGLHSLTNCRLFRDLETPQ*KACRTS
Trigger: TGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAG...ATCTCTAAACAGCCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000402796.5
CDS-3UTR CCA 90 bp ATCAAAAGGAGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGCTGATGCTCCTCTGTGCCTaGACTGCAAAAGGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: IKRSFSTTGLHSLTNCRLMLLCA*TAKGVV
Trigger: AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCAT...CAGCCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCTCCTTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000402796.5
CDS-3UTR CCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGGGTCCTGATGGCAAATaGTCAGCGCAGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRGPDGK*SAQQLA
Trigger: TGCAAGTTGCTGCGCTGACCATTTGCCATCAGGACC...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACAGCTGAGAGAAAGAGATaGGGACATTCGTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTAERKR*GHSSPA
Trigger: AGCGGGAGACGAATGTCCCCATCTCTTTCTCTCAGC...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGTCCTTTGGGGTCAGATaGACACAGTGCTCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKSFGVR*TQCSVW
Trigger: CCAGACGGAGCACTGTGTCCATCTGACCCCAAAGGA...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CAA 72 bp TACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTaGCTATTCACACCCTATCTGTCCCTCAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: YYPPKKGNFHPL*LFTPYLSLSAC
Trigger: GCAGGCACTGAGGGACAGATAGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CAA 72 bp CATGGATTTTGCCTCTTGGCCAGCCAGAGTTTGGCTTaGGTACAAACAGTGATGTCAGTCAGCTCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HGFCLLASQSLA*VQTVMSVSSCW
Trigger: CCAGCACGAGCTGACTGACATCACTGTTTGTACCAAAGCCAAACTCTGGCTGGCCAAGAGGCAAAATCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATGAGGCCTTCAGGGGATaGGCTCTGAATGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNEAFRG*ALNDWR
Trigger: TCTCCAGTCATTCAGAGCTCATCCCCTGAAGGCCTC...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTCAGTGTCCATTGGGATaGGGCCTTCAGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFQCPLG*GLQGMS
Trigger: GCTCATCCCCTGAAGGCCTCATCCCAATGGACACTG...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCACACTGCCCAGACCGGTaGTGTAAAACCCAGAATTGC +
Preference number: 4 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIAHCPDR*CKTQNC
Trigger: GCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTG...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGCCATCAAAGCTCCCAGATGGCAAGTGTCCCCTaGCAGAGGAATAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: LKMSMSSSYSQTCHQSSQMASVP*QRNKTA
Trigger: AGCTGTCTTATTCCTCTGTCAGGGGACACTTGCCAT...CTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACTCTCCCAACTATACTTaGATTCCCATTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSCRHSMACSHLMPISTYSPNYT*IPIQAV
Trigger: GACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGA...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp GAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACACCAACAAAAGGTCCCATGCTaGGAGCAGAAGAAGTACCAT +
Preference number: 4 (lower is better)
Translates to: ESRRSTIHRGSVESLQHQQKVPC*EQKKYH
Trigger: ATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTG...TTGGTGTTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAATGGCTAGTCTGGTaGGGCTCTGGAGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGQWLVW*GSGGTG
Trigger: CCCAGTACCTCCAGAGCCTCACCAGACTAGCCATTG...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AGGAGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGTTTAGAGATGAAGCAGCACACAAATaGGGAATCTTTTCAGACGGG +
Preference number: 4 (lower is better)
Translates to: RSFSTTGLHSLTNCRFRDEAAHK*GIFSDG
Trigger: CCCGTCTGAAAAGATTCCTCATTTGTGTGCTGCTTC...ATCTCTAAACCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACAACTGGTGCAGTCCACTaGACGAAGCAGCACACAAAT +
Preference number: 4 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTTGAVH*TKQHTN
Trigger: ATTTGTGTGCTGCTTCGTTCAGTGGACTGCACCAGT...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGACCCGGCCAATAAACTaGCTCTTAATTAAATGCGTG +
Preference number: 4 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTETRPIN*LLIKCV
Trigger: CACGCATTTAATTAAGAGTCAGTTTATTGGCCGGGT...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp CCAACAATAAGAACTTCTCTCCCATGTTGCACAGCAAGGGTGGCACGCCCTTCTTCAAATGCTCCTCTGTaGCTGGACTGCAAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: PTIRTSLPCCTARVARPSSNAPL*LDCKRC
Trigger: ACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGA...AGAAGGGCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTTCTTATTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGGACCAAGGCACGAGCTaGCATTTCACGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVDQGTS*HFTGVV
Trigger: TACCACTCCCGTGAAATGGCAGCTCGTGCCTTGGTC...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGACTCGGGGACACTGGTaGAGTCCACTGAACGAAGCA +
Preference number: 4 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVTRGHW*SPLNEA
Trigger: TGCTTCGTTCAGTGGACTGCACCAGTGTCCCCGAGT...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GCTGATGAATTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGACTCGGGGACACTGGTaGAGTCCACTGAACGAAGCA +
Preference number: 4 (lower is better)
Translates to: ADELSLALFLHQTRGSPRTRGHW*SPLNEA
Trigger: TGCTTCGTTCAGTGGACTGCACCAGTGTCCCCGAGT...CCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTGGTGAACAAAACATGTaGAGTATCCAAGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEAGEQNM*SIQEQG
Trigger: GCCCTGCTCTTGGATACTGCACATGTTTTGTTCACC...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTTCCACAGTGAGCCGGTaGATTTGGAGAAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEASTVSR*IWRRFL
Trigger: CAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGA...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp AGGAGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGTTTAGAGATGACGGTAGAGCATCCTaGCAGATTAAGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RSFSTTGLHSLTNCRFRDDGRAS*QIKKFS
Trigger: GCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTC...ATCTCTAAACCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCCTGAGACAGGAGAACTaGTTGAACCCAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSLRQEN*LNPGGR
Trigger: TCTGCCTCCTGGGTTCAAGCAGTTCTCCTGTCTCAG...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGGTGTCAGTAGGGCCATaGACTCCAGAGGCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRVSVGP*TPEALK
Trigger: TTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACAC...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTCTGGCACAGGCTGCATaGGCAGAAGCTGGCACAACA +
Preference number: 4 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFLAQAA*AEAGTT
Trigger: TGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAG...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTCTGGCACAGGCTGCATaGGCAGAAGCTGGCACAACA +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVLAQAA*AEAGTT
Trigger: TGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAG...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTTCCATCAGAAGATTCTaGCACAGGCTGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELSIRRF*HRLHGQ
Trigger: CTGCCCATGCAGCCTGTGCCAGAATCTTCTGATGGA...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCATGCAGCTGGGGAGTGTaGACAACAGAGTTCGAATGG +
Preference number: 4 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIACSWGV*TTEFEW
Trigger: CCATTCGAACTCTGTTGTCCACACTCCCCAGCTGCA...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATACTGGTCAGTGCAGCTaGGGAGTGTGGACAACAGAG +
Preference number: 4 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNTGQCS*GVWTTE
Trigger: CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGT...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CAAAACATGTGCAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATGCTTCCCACTGTCTACTGTATTaGCTACAGTTTCCAACTGTT +
Preference number: 4 (lower is better)
Translates to: QNMCSIQEQGLPTPTHASHCLLY*LQFPTV
Trigger: AACAGTTGGAAACTGTAGCCAATACAGTAGACAGTG...GGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTGCACATGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp AGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGCTGTTTAGAGATAAGACTCTCCAGAACTaGCTGGTTGTCCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SFSTTGLHSLTNCRLFRDKTLQN*LVVLCR
Trigger: TCTGCAAAGGACAACCAGCCAGTTCTGGAGAGTCTT...ATCTCTAAACAGCCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGAACTCAAGAATAGGATaGGGGTTGGTGAGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTENSRIG*GLVRKS
Trigger: ACTTTTCCTCACCAACCCCCATCCTATTCTTGAGTT...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCTCTTGTCGCCCAGGCTaGAGTACAATGGCGCAATCT +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSSCRPG*STMAQS
Trigger: AGATTGCGCCATTGTACTCCAGCCTGGGCGACAAGA...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CAA 72 bp ATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTaGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: MKNLEKCPMNVV*PETLVSAAGEC
Trigger: ACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTGGGATGAGCTCTGAATaGCTGGAGACACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVGMSSE*LETPQW
Trigger: CCACTGTGGTGTCTCCAGTCATTCAGAGCTCATCCC...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCAGAGGCCTTCAGGGGATaGGCTCTGAATGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPEAFRG*ALNDWR
Trigger: TCTCCAGTCATTCAGAGCTCATCCCCTGAAGGCCTC...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCATCCGTGTTTGGAGTCTaGGTAGGCTTGCAACAAATG +
Preference number: 4 (lower is better)
Translates to: NLEKCPMNVVLPETLVSASVFGV*VGLQQM
Trigger: CATTTGTTGCAAGCCTACTCAGACTCCAAACACGGA...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACAGTGACACTCCATCCGTaGGTTGCACACAATGTAACA +
Preference number: 4 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTVTLHP*VAHNVT
Trigger: TGTTACATTGTGTGCAACTCACGGATGGAGTGTCAC...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCATGGCAAGTGTCCCCTaGCAGAGGAATAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSMASVP*QRNKTA
Trigger: AGCTGTCTTATTCCTCTGTCAGGGGACACTTGCCAT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp GCTGATGAATTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGGTTTGGTGCTTGTGCTaGGCTCCAATGCTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: ADELSLALFLHQTRGSPRVWCLC*APMLPE
Trigger: TTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAAC...CCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATGTGCACGTCGGCGTCTaGGAAGAGTCGCAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNVHVGV*EESQAP
Trigger: AGGCGCCTGCGACTCTTCTCAGACGCCGACGTGCAC...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp CTTACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTGGAGTGGTAGACAGGTaGGTGACCACACCTCATAAT +
Preference number: 4 (lower is better)
Translates to: LTTHLRKATSIPSCYSHPGVVDR*VTTPHN
Trigger: ATTATGAGGTGTGGTCACTCACCTGTCTACCACTCC...AGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp CTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGCCATCAAAGCTCCCAGGCATGTGGTGGGAAATaGCTTTGGAAGCAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LKMSMSSSYSQTCHQSSQACGGK*LWKQVS
Trigger: TGAGACTTGCTTCCAAAGTCATTTCCCACCACATGC...CTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAAAAGATGGTCTTCACATaGCAAGATGACCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: HAESRRSTIHRGSVESLQKMVFT*QDDQLN
Trigger: GTTCAGCTGGTCATCTTGTCATGTGAAGACCATCTT...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAAGAAGGCAAACTCTGTTaGCTGGCAGGTATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: HAESRRSTIHRGSVESLQEGKLC*LAGIFL
Trigger: CAAGAAAATACCTGCCAGTCAACAGAGTTTGCCTTC...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACGGATATTTTCCTGTTTaGCCACAGTCAACGAAGACA +
Preference number: 4 (lower is better)
Translates to: SSCRHSMACSHLMPISTYGYFPV*PQSTKT
Trigger: TGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCC...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTAGCTATTCGCAGACATaGCATCAAAGCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELSYSQT*HQSSQS
Trigger: GCTCTGGGAGCTTTGATGGCATGTCTGCGAATAGCT...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCAGCTATTCGCAGACATaGCATCAAAGCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSSYSQT*HQSSQS
Trigger: GCTCTGGGAGCTTTGATGGCATGTCTGCGAATAGCT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GCTCCAATGCTGCCTGAAATAAGCCTTGCAGTTTCCCCGAATCCTGAAAATGTAAGAGAACAGATCTGTTaGCGCACTCCTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: APMLPEISLAVSPNPENVREQIC*RTPGDW
Trigger: CCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCT...TACATTTTCAGGATTCGGGGAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp CAAAACATGTGCAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATGCTTCCAAAGAAACAGAAGGGTaGTGTTTGGTTAACTCATTC +
Preference number: 4 (lower is better)
Translates to: QNMCSIQEQGLPTPTHASKETEG*CLVNSF
Trigger: GAATGAGTTAACCAAACAGCACCCTTCTGTTTCTTT...GGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTGCACATGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AGGCAGACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTTCAAATGCTCCTCTGTaGCTGGACTGCAAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RQTRMTVEHPARLRSSAGSNAPL*LDCKRC
Trigger: ACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGA...ACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAATGTAAAACCCAGAATTaGAGCCTTAGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: HAESRRSTIHRGSVESLQCKTQN*SLSSIS
Trigger: GCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTGACCAAGGCACGAGCTaGCATTTCACGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKIDQGTS*HFTGVV
Trigger: TACCACTCCCGTGAAATGGCAGCTCGTGCCTTGGTC...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCCCCACTCCGACCCATaGTTCCGTTCTGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: AFLPWKQFLCSDYFHKASPHSDP*FRSASP
Trigger: TGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGG...GCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp TGTCACACAGTCGTATGGTTTGGTGCTTGTGCTGAGCTCCAATGCTGCCTGAAAGACGGTAGAGCATCCTaGCAGATTAAGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: CHTVVWFGACAELQCCLKDGRAS*QIKKFS
Trigger: GCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTC...TTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCAATAGTAGTCACTCGTaGACGTCGGCGTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSNSSHS*TSASEK
Trigger: CTTCTCAGACGCCGACGTGCACGAGTGACTACTATT...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGCCTGCAGTATGGCTTaGTCCATTTGCATTACCTCC +
Preference number: 4 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPACSMA*SICITS
Trigger: GGAGGTAATGCAAATGGAGCAAGCCATACTGCAGGC...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GAAATCTGCACCTTCCACAGTGAGCCGGTGCATTTGGAGAAGGTTTTTGAACATCTGTCCCTCAGTGCCTaGTCAAGCCTACAGCAATCT +
Preference number: 4 (lower is better)
Translates to: EICTFHSEPVHLEKVFEHLSLSA*SSLQQS
Trigger: AGATTGCTGTAGGCTTGAGCAGGCACTGAGGGACAG...ATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTCCTGTTATACAGTaGACTCGCCCATACATTGGA +
Preference number: 4 (lower is better)
Translates to: NLEKCPMNVVLPETLVSAAPVIQ*TRPYIG
Trigger: TCCAATGTATGGGCGAGTCCACTGTATAACAGGAGC...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AGGCTGTCCGTTAGGCTCGGGGAACTTGATTCAAGGACTTGTATGGCTGAATTACTGGAGACACCACAGTaGAAAGCCTGTAGGACATCA +
Preference number: 4 (lower is better)
Translates to: RLSVRLGELDSRTCMAELLETPQ*KACRTS
Trigger: TGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAG...TAATTCAGCCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGCCATCAAAGCTCCCAGATGCTCCTCTGTGCCTaGACTGCAAAAGGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: LKMSMSSSYSQTCHQSSQMLLCA*TAKGVV
Trigger: AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCAT...CTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTTCAGTCAGCTCGTGCTaGAAGTCTGAATTCGTTCCG +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELSVSSC*KSEFVP
Trigger: CGGAACGAATTCAGACTTCCAGCACGAGCTGACTGA...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGACCACTCGGGGACACTaGTGCAGTCCACTGAACGAA +
Preference number: 4 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLTTRGH*CSPLNE
Trigger: TTCGTTCAGTGGACTGCACCAGTGTCCCCGAGTGGT...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGAACCACTCGGGGACACTaGTGCAGTCCACTGAACGAA +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRTTRGH*CSPLNE
Trigger: TTCGTTCAGTGGACTGCACCAGTGTCCCCGAGTGGT...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp GAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACACCAACTTGCAGAAGCATTCTaGGTGATTTTCCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: ESRRSTIHRGSVESLQHQLAEAF*VIFLHG
Trigger: GCCATGAAGGAAAATCACCCAGAATGCTTCTGCAAG...TTGGTGTTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACGTAATGCCTGCAGTATaGCTTGCTCCATTTGCATTA +
Preference number: 4 (lower is better)
Translates to: SSCRHSMACSHLMPISTYVMPAV*LAPFAL
Trigger: TAATGCAAATGGAGCAAGCCATACTGCAGGCATTAC...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp GAAATCTGCACCTTCCACAGTGAGCCGGTGCATTTGGAGAAGGTTTTTGAACATAGAGCCTTAAACTCCTaGGCCCAAACCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EICTFHSEPVHLEKVFEHRALNS*AQTILL
Trigger: CAGGAGGATGGTTTGGGCCCAGGAGTTTAAGGCTCT...ATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTTCAGGGGATGAGCTCTaGATGACTGGAGACACCACA +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVSGDEL*MTGDTT
Trigger: TGTGGTGTCTCCAGTCATTCAGAGCTCATCCCCTGA...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CCTGTCTACTGTATTGGCTACAGTTTCCAACTGTTTGAGAAGAAAAGGATAGAGCAGTGTCCATTGGGATaGGGCCTTCAGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PVYCIGYSFQLFEKKRIEQCPLG*GLQGMS
Trigger: GCTCATCCCCTGAAGGCCTCATCCCAATGGACACTG...CTCTATCCTTTTCTTCTCAAACAGTTGGAAACTGTAGCCAATACAGTAGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402796.5
CDS-3UTR TCA 90 bp TGTCACACAGTCGTATGGTTTGGTGCTTGTGCTGAGCTCCAATGCTGCCTGAAAAGGATATTTAAAGCATaGACCTGGGGGACTGTACTC +
Preference number: 4 (lower is better)
Translates to: CHTVVWFGACAELQCCLKRIFKA*TWGTVL
Trigger: GAGTACAGTCCCCCAGGTTCATGCTTTAAATATCCT...TTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCGGAGTGGTAGACAGGTaGGTGACCACACCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPGVVDR*VTTPVY
Trigger: GTAGACAGGTGTGGTCACTCACCTGTCTACCACTCC...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402796.5
CDS-3UTR TCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCACTTTGGTACAAACAGTaGTGTCAGTCAGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIALWYKQ*CQSARA
Trigger: AGCACGAGCTGACTGACATCACTGTTTGTACCAAAG...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCAAAGTTTCAAGGTCCTaGTGGCAAATGGTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSKVSRS*WQMVSA
Trigger: TGCGCTGACCATTTGCCATCAGGACCTTGAAACTTT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp CAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAAGCGTGACACTCCATCCGTaGGTTGCACACAATGTAACA +
Preference number: 4 (lower is better)
Translates to: QFPVLHTCLHVVGNDFGSVTLHP*VAHNVT
Trigger: TGTTACATTGTGTGCAACTCACGGATGGAGTGTCAC...GCTTCCAAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGAATAAGACAGCTGACTaGGAGATGTCACCACAACAG +
Preference number: 4 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRNKTAD*EMSPQQ
Trigger: CTGTTGTGGTGACATCTCTCAGTCAGCTGTCTTATT...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGATGGCAAGTGTCCCCTaGCAGAGGAATAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVMASVP*QRNKTA
Trigger: AGCTGTCTTATTCCTCTGTCAGGGGACACTTGCCAT...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CTCGAGGCTGAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCTTCACATGACAAGATaGCCAGCTGAACCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LEAESHSESSVSGLLTLNLHMTR*PAEPTA
Trigger: AGCAGTGGGTTCAGCTGGTCATCTTGTCATGTGAAG...ATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTCAGCCTCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTGCAGGTATTTTCTTGTaGCATGGCAGTTGTCACGGT +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELAGIFL*HGSCHG
Trigger: ACCGTGACAACTGCCATGTCACAAGAAAATACCTGC...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACATTCAAAGAGGGAACTaGAATTTGACCCTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SSCRHSMACSHLMPISTYIQRGN*NLTLLR
Trigger: TCTCAAGAGGGTCAAATTTCAGTTCCCTCTTTGAAT...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGAATCAGGGACGAAATCTaGACCTTCCACAGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRIRDEI*TFHSEP
Trigger: CGGCTCACTGTGGAAGGTGCAGATTTCGTCCCTGAT...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGGAAACCCAAGTCTCATaGCACTGGTCAATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRETQVS*HWSIQE
Trigger: TTCTTGGATTGACCAGTGGCATGAGACTTGGGTTTC...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GAAATCTGCACCTTCCACAGTGAGCCGGTGCATTTGGAGAAGGTTTTTGAACATAGCTATTCGCAGACATaGCATCAAAGCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: EICTFHSEPVHLEKVFEHSYSQT*HQSSQS
Trigger: GCTCTGGGAGCTTTGATGGCATGTCTGCGAATAGCT...ATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTTCAAATGCTCCTCTGTaGCTGGACTGCAAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELSNAPL*LDCKRC
Trigger: ACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGA...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CACGGGAGTGGTAGACAGGTGAGTGACCACACCTGTCTACTGTATTGGCTACAGTTCAGATGCCAACAGTaGCTGTATGTAGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: HGSGRQVSDHTCLLYWLQFRCQQ*LYVERN
Trigger: ATTCCTTTCTACATACAGGCACTGTTGGCATCTGAA...CTGTAGCCAATACAGTAGACAGGTGTGGTCACTCACCTGTCTACCACTCCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402796.5
CDS-3UTR GCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCGGAAACACTGGTCAGTaGAGCTGGGGAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPGNTGQ*SWGVWT
Trigger: TGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCC...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTCCCATGCTTCCGTTCTaGCAGTCCAACATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVPMLPF*QSNMAS
Trigger: ACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGG...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCACCCCACTCCGACCCATaGTTCCGTTCTGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TAFLPWKQFLCSDYFHKAPHSDP*FRSASP
Trigger: TGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGG...TGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACTCCCACACACTTAGATaGAGCTACAACTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SSCRHSMACSHLMPISTYSHTLR*SYNCFK
Trigger: TTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGA...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGACCCAAACCATCCTCCTaGCTTAGCCTCCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRPKPSS*LSLPSS
Trigger: ACTACTTGGGAGGCTAAGGCAGGAGGATGGTTTGGG...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCAGAAGGGTGCTGTTTaGTTAACTCATTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEAQKGAV*LTHSLV
Trigger: AACCAGAGAATGAGTTAACCAAACAGCACCCTTCTG...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTTGCAGCTGGGGAGTGTaGACAACAGAGTTCGAATGG +
Preference number: 4 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGCSWGV*TTEFEW
Trigger: CCATTCGAACTCTGTTGTCCACACTCCCCAGCTGCA...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCACTGGTCAGTGCAGCTaGGGAGTGTGGACAACAGAG +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPTGQCS*GVWTTE
Trigger: CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGT...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTTTGCCGGAAACACTaGTCAGTGCAGCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPFCRKH*SVQLGS
Trigger: ACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAA...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp TGTCACACAGTCGTATGGTTTGGTGCTTGTGCTGAGCTCCAATGCTGCCTGAAAAATTCGTTCCGTGTTTaGAGTCTGAGTAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: CHTVVWFGACAELQCCLKNSFRV*SLSRLA
Trigger: TGCAAGCCTACTCAGACTCCAAACACGGAACGAATT...TTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCTCAGTCAGCTCGTGCTaGAAGTCTGAATTCGTTCCG +
Preference number: 4 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSSVSSC*KSEFVP
Trigger: CGGAACGAATTCAGACTTCCAGCACGAGCTGACTGA...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTGGTCCTGATGGCAAATaGTCAGCGCAGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKIGPDGK*SAQQLA
Trigger: TGCAAGTTGCTGCGCTGACCATTTGCCATCAGGACC...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTTCTGCCAGTCCAACATaGCAAGTGTCCCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKISASPT*QVSPDR
Trigger: TCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGA...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTTCTCAGAGCATCCAATaGATGTTCCCAATGGGTATA +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEASQSIQ*MFPMGI
Trigger: TATACCCATTGGGAACATCCATTGGATGCTCTGAGA...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGTGTCACACAGTCGTATaGTTTGGTGCTTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKCHTVV*FGACAE
Trigger: CTCAGCACAAGCACCAAACCATACGACTGTGTGACA...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp CATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCGTTGCACAGCAAGGGTaGCACGCCCTTCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HFFHGNNFCAPITFTKQAVAQQG*HALLSK
Trigger: CTTGGAGAGAAGGGCGTGCCACCCTTGCTGTGCAAC...GGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp AATTCCCATTCAGGCTGTCCGTTAGGCTCGGGGAACTTGATTCAAGGACTTGTAAAACTCAGCAGCTGGTaGAAGCTCTCTGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: NSHSGCPLGSGNLIQGLVKLSSW*KLSEEL
Trigger: CAGTTCTTCAGAGAGCTTCCACCAGCTGCTGAGTTT...TACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCTGAATGGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAAGAGTCGCAGGCGCCTaGTCCAGTCCCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIRVAGA*SSPGSR
Trigger: CCTGCTTCCGGGACTGGACCAGGCGCCTGCGACTCT...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGCCACCACACCCGGCTaGTTTTCTTTTAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPATTPG*FSFKCL
Trigger: AAGACACTTAAAAGAAAACCAGCCGGGTGTGGTGGC...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp GCTGATGAATTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGCTGGAGCTACTCTGGTaGAACTTACAGAGGACCTAC +
Preference number: 4 (lower is better)
Translates to: ADELSLALFLHQTRGSPRLELLW*NLQRTY
Trigger: GTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAG...CCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp ATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTTCAGGGGATGAGCTCTaGATGACTGGAGACACCACA +
Preference number: 4 (lower is better)
Translates to: ISFRIICKRLADSESVSISGDEL*MTGDTT
Trigger: TGTGGTGTCTCCAGTCATTCAGAGCTCATCCCCTGA...AATGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTGAGGCCTTCAGGGGATaGGCTCTGAATGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIEAFRG*ALNDWR
Trigger: TCTCCAGTCATTCAGAGCTCATCCCCTGAAGGCCTC...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCAAGGATATTTAAAGCATaGACCTGGGGGACTGTACTC +
Preference number: 4 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIARIFKA*TWGTVL
Trigger: GAGTACAGTCCCCCAGGTTCATGCTTTAAATATCCT...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAAGATGTCCGTGTTTGGAGTCTaGGTAGGCTTGCAACAAATG +
Preference number: 4 (lower is better)
Translates to: YSCIRHEVLPGISCRLKMSVFGV*VGLQQM
Trigger: CATTTGTTGCAAGCCTACTCAGACTCCAAACACGGA...CATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CTCGAGGCTGAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCTTTGGTACAAACAGTaGTGTCAGTCAGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: LEAESHSESSVSGLLTLNLWYKQ*CQSARA
Trigger: AGCACGAGCTGACTGACATCACTGTTTGTACCAAAG...ATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTCAGCCTCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp GCTGATGAATTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGAAAGTTTCAAGGTCCTaGTGGCAAATGGTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ADELSLALFLHQTRGSPRKVSRS*WQMVSA
Trigger: TGCGCTGACCATTTGCCATCAGGACCTTGAAACTTT...CCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp GCTCCAATGCTGCCTGAAATAAGCCTTGCAGTTTCCCCGAATCCTGAAAATGTAGTGACACTCCATCCGTaGGTTGCACACAATGTAACA +
Preference number: 4 (lower is better)
Translates to: APMLPEISLAVSPNPENVVTLHP*VAHNVT
Trigger: TGTTACATTGTGTGCAACTCACGGATGGAGTGTCAC...TACATTTTCAGGATTCGGGGAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp GAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACACCAAAATATAATGGATTTGTaGCACTCCATCCGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: ESRRSTIHRGSVESLQHQNIMDL*HSIREL
Trigger: CAACTCACGGATGGAGTGTCACAAATCCATTATATT...TTGGTGTTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGCCATCAAAGCTCCCAGAGAAACATGCTTGGATaGCGATTTGGTTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: LKMSMSSSYSQTCHQSSQRNMLG*RFGSPI
Trigger: TATGGGAGAACCAAATCGTCATCCAAGCATGTTTCT...CTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGCAAAAGGTCCCATGCTaGGAGCAGAAGAAGTACCAT +
Preference number: 4 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVQKVPC*EQKKYH
Trigger: ATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTG...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTGGAGTGGTAGACAGGTaGGTGACCACACCTCATAAT +
Preference number: 4 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFGVVDR*VTTPHN
Trigger: ATTATGAGGTGTGGTCACTCACCTGTCTACCACTCC...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTGGAAGCTCTCTaGAGAACTGAGACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETLVEAL*RTETGG
Trigger: ACCTCCTGTCTCAGTTCTTCAGAGAGCTTCCACCAG...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTTCATGCCCAGACCGGTaGTGTAAAACCCAGAATTGC +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKISCPDR*CKTQNC
Trigger: GCAATTCTGGGTTTTACATCACCGGTCTGGGCATGA...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCACATGGCCTTATAAAATaGGGTAGGAGGTGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPHGLIK*GRRCSL
Trigger: AAGGGAACACCTCCTACCTCATTTTATAAGGCCATG...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp AGGCAGACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTCCTGTGAACTCAAGGTaGACAAAACATGTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: RQTRMTVEHPARLRSSAGPVNSR*TKHVQY
Trigger: ATACTGCACATGTTTTGTTCACCTTGAGTTCACAGG...ACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474159.6
CDS-3UTR GCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCAGAAACCCAAGTCTCATaGCACTGGTCAATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIAETQVS*HWSIQE
Trigger: TTCTTGGATTGACCAGTGGCATGAGACTTGGGTTTC...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAAAAGGATGGGAAAGATTaGTCTTGTCCAGTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: MNVVLPETLVSAAGECGQKDGKD*SCPVLA
Trigger: TGCTAAAACTGGACAAGAGCAATCTTTCCCATCCTT...TTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTAGCTATTCGCAGACATaGCATCAAAGCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGSYSQT*HQSSQS
Trigger: GCTCTGGGAGCTTTGATGGCATGTCTGCGAATAGCT...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGAGCTATTCGCAGACATaGCATCAAAGCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLSYSQT*HQSSQS
Trigger: GCTCTGGGAGCTTTGATGGCATGTCTGCGAATAGCT...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGGCCTTGCTTTATTCTTaGATCAGACACGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKALLYS*IRHEVL
Trigger: GAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGC...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGATACATTGGAAATGCTaGTGCTGCCTGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKIHWKC*CCLKQR
Trigger: TCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTAT...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATGATTCTGGCACAGGCTaGATGGGCAGAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYDSGTG*MGRSWH
Trigger: GTGCCAGCTTCTGCCCATGCAGCCTGTGCCAGAATC...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACCTATTTCTTTTACCTaGTCCACCGTCAATAATCCA +
Preference number: 4 (lower is better)
Translates to: HAESRRSTIHRGSVESLQPISFT*STVNNP
Trigger: TGGATTATTGACGGTGGAGCAGGTAAAAGAAATAGG...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCACCTCTGTGCCTGGACTaGAAAAGGTGTTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIAPLCLD*KRCCLK
Trigger: CTTTAAACAACACCTTTTGCAGTCCAGGCACAGAGG...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GCTCCAATGCTGCCTGAAATAAGCCTTGCAGTTTCCCCGAATCCTGAAAATGTATGTTCTGGCAGCTTTTaGAGACTCACATTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: APMLPEISLAVSPNPENVCSGSF*RLTFGH
Trigger: GTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA...TACATTTTCAGGATTCGGGGAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTATGTCAGTCAGCTCGTaGTGGAAGTCTGAATTCGTT +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELMSVSS*WKSEFV
Trigger: AACGAATTCAGACTTCCAGCACGAGCTGACTGACAT...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTCATGCCATTTTTATCTaGTTTCTCCAGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELHAIFI*FLQQRH
Trigger: GTGCCTCTGCTGGAGAAAGCAGATAAAAATGGCATG...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCACATGCCATTTTTATCTaGTTTCTCCAGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPHAIFI*FLQQRH
Trigger: GTGCCTCTGCTGGAGAAAGCAGATAAAAATGGCATG...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp AGGCAGACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTCGAGAAGTAAAACGGTaGATAGCCTCAGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: RQTRMTVEHPARLRSSAGREVKR*IASGRK
Trigger: TTTTCTACCTGAGGCTATGCACCGTTTTACTTCTCG...ACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCCCCACTCCGACCCATaGTTCCGTTCTGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNPHSDP*FRSASP
Trigger: TGGACTGGCAGAACGGAAGCATGGGTCGGAGTGGGG...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GCTCCAATGCTGCCTGAAATAAGCCTTGCAGTTTCCCCGAATCCTGAAAATGTATCCACAGTGAGCCGGTaGATTTGGAGAAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: APMLPEISLAVSPNPENVSTVSR*IWRRFL
Trigger: CAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGA...TACATTTTCAGGATTCGGGGAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATACCAAACATGGATTTTaGCTCTTGGCCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNTKHGF*LLASQS
Trigger: ACTCTGGCTGGCCAAGAGGCAAAATCCATGTTTGGT...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACCCTATGCAACATTCCTaGAAAAATGTACAGCATGAA +
Preference number: 4 (lower is better)
Translates to: SSCRHSMACSHLMPISTYPMQHS*KNVQHE
Trigger: TTCATGCTGTACATTTTTGCAGGAATGTTGCATAGG...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACTTACCACATACTTGGTaGTTAAAACCACAGAAACCT +
Preference number: 4 (lower is better)
Translates to: SSCRHSMACSHLMPISTYLPHTW*LKPQKP
Trigger: AGGTTTCTGTGGTTTTAAGCACCAAGTATGTGGTAA...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACAGACTCGCCCATACATTaGAAATGCTGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETDSPIH*KCCCCL
Trigger: CAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTC...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATGCTCCTGTTATACAGTaGACTCGCCCATACATTGGA +
Preference number: 4 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNAPVIQ*TRPYIG
Trigger: TCCAATGTATGGGCGAGTCCACTGTATAACAGGAGC...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCTCCATCAGAAGATTCTaGCACAGGCTGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPSIRRF*HRLHGQ
Trigger: CTGCCCATGCAGCCTGTGCCAGAATCTTCTGATGGA...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCTCCATCAGAAGATTCTaGCACAGGCTGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFSIRRF*HRLHGQ
Trigger: CTGCCCATGCAGCCTGTGCCAGAATCTTCTGATGGA...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AATTCCCATTCAGGCTGTCCGTTAGGCTCGGGGAACTTGATTCAAGGACTTGTAATCTATCATAACAAATaGGACCAAGGCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NSHSGCPLGSGNLIQGLVIYHNK*DQGTSC
Trigger: GCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGAT...TACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCTGAATGGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp ATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTTTTTGCCGGAAACACTaGTCAGTGCAGCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ISFRIICKRLADSESVSIFCRKH*SVQLGS
Trigger: ACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAA...AATGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCATCTCAGAGCATCCAATaGATGTTCCCAATGGGTATA +
Preference number: 4 (lower is better)
Translates to: NLEKCPMNVVLPETLVSASQSIQ*MFPMGI
Trigger: TATACCCATTGGGAACATCCATTGGATGCTCTGAGA...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGTGAGCCGGTGCATTTaGAGAAGGTTTTTGAACATG +
Preference number: 4 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPVSRCI*RRFLNM
Trigger: CATGTTCAAAAACCTTCTCCAAATGCACCGGCTCAC...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTCTCTCCAGAACTGGCTaGTTGTCCTTTGCAGATCTG +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKILSRTG*LSFADL
Trigger: CAGATCTGCAAAGGACAACCAGCCAGTTCTGGAGAG...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp GCTCCAATGCTGCCTGAAATAAGCCTTGCAGTTTCCCCGAATCCTGAAAATGTAGTTGGTGAGGAAAAGTaGTGTAGTACTGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: APMLPEISLAVSPNPENVVGEEK*CSTGED
Trigger: GTCCTCACCAGTACTACACCACTTTTCCTCACCAAC...TACATTTTCAGGATTCGGGGAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGAATGGAGGCATCCACCTaGCAGAAGGCAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRMEAST*QKANSV
Trigger: AACAGAGTTTGCCTTCTGCCAGGTGGATGCCTCCAT...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCCACAAACTCAGCAGCTaGTGGAAGCTCTCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSHKLSS*WKLSEE
Trigger: TTCTTCAGAGAGCTTCCACCAGCTGCTGAGTTTGTG...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCCACATGCGCCTCTTCTaGAGCTACTCTGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPHMRLF*SYSGGT
Trigger: AGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTG...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CAA 72 bp GCAAAGCTCCTGTTATACAGTGGACTCGCCCATACATaGGAAATGCTGCTGCTGCCTGAAGCAGAGAATTTT +
Preference number: 4 (lower is better)
Translates to: AKLLLYSGLAHT*EMLLLPEAENF
Trigger: AAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTCCACTGTATAACAGGAGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
3UTR CAA 72 bp GGGTATAGACATATTCCAAAAGTCTCCCAACTATACTaGAATTCCCATTCAGGCTGTCCGTTAGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GYRHIPKVSQLY*NSHSGCPLGSG
Trigger: CCCCGAGCCTAACGGACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGACTTTTGGAATATGTCTATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
3UTR CAA 72 bp ATTTTAACATACCTCTTGGCCAGCCAGAGTTTGGCTTaGGTACAAACAGTGATGTCAGTCAGCTCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ILTYLLASQSLA*VQTVMSVSSCW
Trigger: CCAGCACGAGCTGACTGACATCACTGTTTGTACCAAAGCCAAACTCTGGCTGGCCAAGAGGTATGTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTCTGCACCTTCCACAGTaGGCCGGTGCATTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RNNIFSQARISEQCSKDILHLPQ*AGAFGE
Trigger: TTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAG...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATGGGATGAGCTCTGAATaGCTGGAGACACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: IRNNIFSQARISEQCSKDGMSSE*LETPQW
Trigger: CCACTGTGGTGTCTCCAGTCATTCAGAGCTCATCCC...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGAGGATATTTAAAGCATaGACCTGGGGGACTGTACTC +
Preference number: 4 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVRIFKA*TWGTVL
Trigger: GAGTACAGTCCCCCAGGTTCATGCTTTAAATATCCT...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTTCCGTGTTTGGAGTCTaGGTAGGCTTGCAACAAATG +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVSVFGV*VGLQQM
Trigger: CATTTGTTGCAAGCCTACTCAGACTCCAAACACGGA...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTCTTTGGTACAAACAGTaGTGTCAGTCAGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFLWYKQ*CQSARA
Trigger: AGCACGAGCTGACTGACATCACTGTTTGTACCAAAG...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTAAAGTTTCAAGGTCCTaGTGGCAAATGGTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKIKVSRS*WQMVSA
Trigger: TGCGCTGACCATTTGCCATCAGGACCTTGAAACTTT...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCACACTGCTAATCAAATaGGGAATCTTTTCAGACGGG +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSTLLIK*GIFSDG
Trigger: CCCGTCTGAAAAGATTCCTCATTTGATTAGCAGTGT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp ACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAACTGGTGCAGTCCACTaGACGAAGCAGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: TAFLPWKQFLCSDYFHKATGAVH*TKQHTA
Trigger: AGCAGTGTGCTGCTTCGTTCAGTGGACTGCACCAGT...TGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474159.6
CDS-3UTR TCA 90 bp CTCGAGGCTGAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATAATAAGACAGCTGACTaGGAGATGTCACCACAACAG +
Preference number: 4 (lower is better)
Translates to: LEAESHSESSVSGLLTLNNKTAD*EMSPQQ
Trigger: CTGTTGTGGTGACATCTCTCAGTCAGCTGTCTTATT...ATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTCAGCCTCGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAAGATGAATAAGACAGCTGACTaGGAGATGTCACCACAACAG +
Preference number: 4 (lower is better)
Translates to: YSCIRHEVLPGISCRLKMNKTAD*EMSPQQ
Trigger: CTGTTGTGGTGACATCTCTCAGTCAGCTGTCTTATT...CATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCACTATTGAAATTCTATaGACTGATGGGAGACTCCCG +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSTIEIL*TDGRLP
Trigger: CGGGAGTCTCCCATCAGTTCATAGAATTTCAATAGT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGATATCCTCGGCTGCTTaGCATATAATAAGCACGAAA +
Preference number: 4 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRISSAA*HIISTK
Trigger: TTTCGTGCTTATTATATGTCAAGCAGCCGAGGATAT...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp AGGCAGACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGAGTCTGTACCACATaGTTTAGTCAATTACTGCCT +
Preference number: 4 (lower is better)
Translates to: RQTRMTVEHPARLRSSAGRVCTT*FSQLLP
Trigger: AGGCAGTAATTGACTAAATCATGTGGTACAGACTCT...ACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGTCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCGCAATCTCTAATCTCTaGGTTGCCACGGCACCTAAG +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPAISNL*VATAPK
Trigger: CTTAGGTGCCGTGGCAACTCAGAGATTAGAGATTGC...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp CATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTGTCCAGGCTGTTCTTaGACTCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: HFFHGNNFCAPITFTKQACPGCS*TPGLKQ
Trigger: TTGCTTGAGCCCAGGAGTTCAAGAACAGCCTGGACA...GGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp CTCGAGGCTGAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATATACATTGGAAATGCTaGTGCTGCCTGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LEAESHSESSVSGLLTLNIHWKC*CCLKQR
Trigger: TCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTAT...ATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTCAGCCTCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GCTGATGAATTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGCATACCAGCACCATCTaGGCAGTTACATCACATGTT +
Preference number: 4 (lower is better)
Translates to: ADELSLALFLHQTRGSPRHTSTI*AVTSHV
Trigger: AACATGTGATGTAACTGCGCAGATGGTGCTGGTATG...CCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GAAATCTGCACCTTCCACAGTGAGCCGGTGCATTTGGAGAAGGTTTTTGAACATCCTCTGTGCCTGGACTaGAAAAGGTGTTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: EICTFHSEPVHLEKVFEHPLCLD*KRCCLK
Trigger: CTTTAAACAACACCTTTTGCAGTCCAGGCACAGAGG...ATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTTGTTCTGGCAGCTTTTaGAGACTCACATTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVCSGSF*RLTFGH
Trigger: GTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAAGATGCATGCCATTTTTATCTaGTTTCTCCAGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: YSCIRHEVLPGISCRLKMHAIFI*FLQQRH
Trigger: GTGCCTCTGCTGGAGAAAGCAGATAAAAATGGCATG...CATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp GCTCCAATGCTGCCTGAAATAAGCCTTGCAGTTTCCCCGAATCCTGAAAATGTAACTCACCAGGGTCCATaGAGTGGAGAATTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: APMLPEISLAVSPNPENVTHQGP*SGEFSV
Trigger: TACTGAAAATTCTCCACTGCATGGACCCTGGTGAGT...TACATTTTCAGGATTCGGGGAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATCTTCCACCTGATGCATaGTCTCCACACAGGCCACGA +
Preference number: 4 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYLPPDA*SPHRPR
Trigger: TCGTGGCCTGTGTGGAGAGCATGCATCAGGTGGAAG...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACAAATAGTAGTCACTCGTaGACGTCGGCGTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETNSSHS*TSASEK
Trigger: CTTCTCAGACGCCGACGTGCACGAGTGACTACTATT...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGTGTCAAATCTCTCTCTaGCTCTGTCTTGTAAGGATA +
Preference number: 4 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRCQISL*LCLVRI
Trigger: TATCCTTACAAGACAGAGGCAGAGAGAGATTTGACA...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTTTTAAAAGTAATGCCTaGAGTATGGCTTGCTCCATT +
Preference number: 4 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEAFKSNA*SMACSI
Trigger: AATGGAGCAAGCCATACTGCAGGCATTACTTTTAAA...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp ACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTATCCCCCTGATAACTCCTTaGTCATGTGGGATTTTAACA +
Preference number: 4 (lower is better)
Translates to: TTHLRKATSIPSCYSHPIPLITP*SCGILT
Trigger: TGTTAAAATCCCACATGAGCAAGGAGTTATCAGGGG...GATAGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCATCTCTGGTTCACGTTTaGATTTACTCTGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: NLEKCPMNVVLPETLVSASLVHV*IYSAPI
Trigger: AATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGA...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTGACTCGCCCATACATTaGAAATGCTGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIDSPIH*KCCCCL
Trigger: CAGGCAGCAGCAGCATTTCCAATGTATGGGCGAGTC...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCACTGGCACAGGCTGCATaGGCAGAAGCTGGCACAACA +
Preference number: 4 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPLAQAA*AEAGTT
Trigger: TGTTGTGCCAGCTTCTGCCCATGCAGCCTGTGCCAG...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCTCAGTCAGCTCGTGCTaGAAGTCTGAATTCGTTCCG +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPSVSSC*KSEFVP
Trigger: CGGAACGAATTCAGACTTCCAGCACGAGCTGACTGA...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTGGTCCTGATGGCAAATaGTCAGCGCAGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIGPDGK*SAQQLA
Trigger: TGCAAGTTGCTGCGCTGACCATTTGCCATCAGGACC...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTCTGCCAGTCCAACATaGCAAGTGTCCCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: HFFHGNNFCAPITFTKQASASPT*QVSPDR
Trigger: TCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGA...GGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAGTAATCTCACCACTTTaGGAGGCCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEVISPL*EAEAGR
Trigger: TCTGCCCGCCTCGGCCTCCCAAAGTGGTGAGATTAC...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCAGCTCCCTCATGCTTTaGCCATTCCCTGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCSSLML*PFPVKE
Trigger: CTCCTTCACAGGGAATGGCCAAAGCATGAGGGAGCT...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGCAACTTATTCTTCCTaGTCTAGGAAAGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPATYSS*SRKGRN
Trigger: GTTTCTGCCTTTCCTAGACCAGGAAGAATAAGTTGC...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTTCTGGAGCTACTCTaGTGGAACTTACAGAGGACC +
Preference number: 4 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETLLELL*WNLQRT
Trigger: GGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAG...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CAA 72 bp CTATCCTACCACCACCAGAGTCCTGCAACACAGATTTaGAACATGGCATTACAGAGAGGACTCCCTGTATAT +
Preference number: 4 (lower is better)
Translates to: LSYHHQSPATQI*NMALQRGLPVY
Trigger: ATATACAGGGAGTCCTCTCTGTAATGCCATGTTCAAAATCTGTGTTGCAGGACTCTGGTGGTGGTAGGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCTGCACCTTCCACAGTaGGCCGGTGCATTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNLHLPQ*AGAFGE
Trigger: TTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAG...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGTTAGTATCTCGAGGCTaGATCTCATTCAGAATCATC +
Preference number: 4 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKLVSRG*ISFRII
Trigger: GATGATTCTGAATGAGATTCAGCCTCGAGATACTAA...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp GAAACATGCTTGGATGACGATTTGGTTCTCCCATATCACTGTCTACTGTATTGGAAAGAGAAGTGTGGATaGATTTCGCACTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: ETCLDDDLVLPYHCLLYWKEKCG*ISHCPD
Trigger: GTCTGGGCAGTGCGAAATTCATCCACACTTCTCTTT...CCAATACAGTAGACAGTGATATGGGAGAACCAAATCGTCATCCAAGCATGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp TTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTGGGGTCAGATTGGAGAAGTGTCCCATaGATGTGGTTTTGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: FHWKQYPSSRSRTPLGSDWRSVP*MWFCRK
Trigger: TTTCCGGCAAAACCACATTCATGGGACACTTCTCCA...ATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp ATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTTGGAGAAGTGTCCCATaGATGTGGTTTTGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: ISFRIICKRLADSESVSIWRSVP*MWFCRK
Trigger: TTTCCGGCAAAACCACATTCATGGGACACTTCTCCA...AATGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CCTGTCTACTGTATTGGCTACAGTTTCCAACTGTTTGAGAAGAAAAGGATAGAGCTCGTGCTGGAAGTCTaGATTCGTTCCGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PVYCIGYSFQLFEKKRIELVLEV*IRSVFG
Trigger: TCCAAACACGGAACGAATTCAGACTTCCAGCACGAG...CTCTATCCTTTTCTTCTCAAACAGTTGGAAACTGTAGCCAATACAGTAGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402796.5
CDS-3UTR TCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCTGGCTCTTTAATCTGTaGACTCAAGGTGAACAAAAC +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSWLFNL*TQGEQN
Trigger: GTTTTGTTCACCTTGAGTTCACAGATTAAAGAGCCA...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATGTTTGGTGCTTGTGCTaGGCTCCAATGCTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: IRNNIFSQARISEQCSKDVWCLC*APMLPE
Trigger: TTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAAC...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTGAGGTGGCACTGCTCTaGCACCATCCTTTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIEVALL*HHPLKV
Trigger: CACCTTCAAAGGATGGTGTCAGAGCAGTGCCACCTC...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGAAAGTCCTTTCCTCTTaGATGCGTAGTCTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVKVLSS*MRSLVN
Trigger: GTTCACAAGACTACGCATTCAAGAGGAAAGGACTTT...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp CCACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGACTGGTGCAGTCCACTaGACGAAGCAGCACACAAAT +
Preference number: 4 (lower is better)
Translates to: PLHFFHGNNFCAPITFTKTGAVH*TKQHTN
Trigger: ATTTGTGTGCTGCTTCGTTCAGTGGACTGCACCAGT...CTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAGCAATCTCAGCCCATTaGAACCTCAGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEAISAH*NLSLLG
Trigger: ACCCAGGAGGCTGAGGTTTCAATGGGCTGAGATTGC...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATCAGGGACGAAATCTaGACCTTCCACAGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: IRNNIFSQARISEQCSKDIRDEI*TFHSEP
Trigger: CGGCTCACTGTGGAAGGTGCAGATTTCGTCCCTGAT...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGGAAACCCAAGTCTCATaGCACTGGTCAATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLETQVS*HWSIQE
Trigger: TTCTTGGATTGACCAGTGGCATGAGACTTGGGTTTC...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTAAGGATGGGAAAGATTaGTCTTGTCCAGTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELKDGKD*SCPVLA
Trigger: TGCTAAAACTGGACAAGAGCAATCTTTCCCATCCTT...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTGGGGTCAGATCTCCCAGGTATCAGTTaGAGACTGAAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: FHWKQYPSSRSRTPLGSDLPGIS*RLKMSM
Trigger: CATGGACATCTTCAGTCTGCAACTGATACCTGGGAG...ATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp GAAACATGCTTGGATGACGATTTGGTTCTCCCATATCACTGTCTACTGTATTGGCTCCCAGGTATCAGTTaGAGACTGAAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: ETCLDDDLVLPYHCLLYWLPGIS*RLKMSM
Trigger: CATGGACATCTTCAGTCTGCAACTGATACCTGGGAG...CCAATACAGTAGACAGTGATATGGGAGAACCAAATCGTCATCCAAGCATGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTGCCTTGCTTTATTCTTaGATCAGACACGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVALLYS*IRHEVL
Trigger: GAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGC...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGGCCTTGCTTTATTCTTaGATCAGACACGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLALLYS*IRHEVL
Trigger: GAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGC...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp CCAACAATAAGAACTTCTCTCCCATGTTGCACAGCAAGGGTGGCACGCCCTTCTTTTAGAGATAACTTCTaGAAAGCTCCTGTTATACAG +
Preference number: 4 (lower is better)
Translates to: PTIRTSLPCCTARVARPSFRDNF*KAPVIQ
Trigger: CTGTATAACAGGAGCTTTGCAGAAGTTATCTCTAAA...AGAAGGGCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTTCTTATTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTCCTCTGTGCCTGGACTaGAAAAGGTGTTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVPLCLD*KRCCLK
Trigger: CTTTAAACAACACCTTTTGCAGTCCAGGCACAGAGG...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCAGACCAAGGCACGAGCTaGCATTTCACGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPDQGTS*HFTGVV
Trigger: TACCACTCCCGTGAAATGGCAGCTCGTGCCTTGGTC...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGAAACACTGGTCAGTaGAGCTGGGGAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQGNTGQ*SWGVWT
Trigger: TGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCC...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GCTGAGCAGGATATTTTCCTGTTTGACCACAGTCAACGAAGACAGCACAAGCAAACTCCATCCGTGAGTTaGACACAATGTAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: AEQDIFLFDHSQRRQHKQTPSVS*TQCNSK
Trigger: TTTGCTGTTACATTGTGTGCAACTCACGGATGGAGT...TTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCATGCCATTTTTATCTaGTTTCTCCAGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLHAIFI*FLQQRH
Trigger: GTGCCTCTGCTGGAGAAAGCAGATAAAAATGGCATG...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp TATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAAGATGCGAGAAGTAAAACGGTaGATAGCCTCAGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: YSCIRHEVLPGISCRLKMREVKR*IASGRK
Trigger: TTTTCTACCTGAGGCTATGCACCGTTTTACTTCTCG...CATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCAACTCGGGGACACTGGTaGAGTCCACTGAACGAAGCA +
Preference number: 4 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPTRGHW*SPLNEA
Trigger: TGCTTCGTTCAGTGGACTGCACCAGTGTCCCCGAGT...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCACCCATGCTTCCGTTCTaGCAGTCCAACATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: TAFLPWKQFLCSDYFHKAPMLPF*QSNMAS
Trigger: ACTTGCCATGTTGGACTGGCAGAACGGAAGCATGGG...TGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp ATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTGGTGAACAAAACATGTaGAGTATCCAAGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ISFRIICKRLADSESVSIGEQNM*SIQEQG
Trigger: GCCCTGCTCTTGGATACTGCACATGTTTTGTTCACC...AATGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACAGGTGAACAAAACATGTaGAGTATCCAAGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETGEQNM*SIQEQG
Trigger: GCCCTGCTCTTGGATACTGCACATGTTTTGTTCACC...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AGGCAGACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTGAATTTTCAGTATCTTaGAGAAGCATTCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: RQTRMTVEHPARLRSSAGEFSVS*RSILGD
Trigger: ATCACCCAGAATGCTTCTGCAAGATACTGAAAATTC...ACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp GCTGAGCAGGATATTTTCCTGTTTGACCACAGTCAACGAAGACAGCACAAGCAACCCGCATTCACTGGATaGTGTAACAAATTACCACAT +
Preference number: 4 (lower is better)
Translates to: AEQDIFLFDHSQRRQHKQPAFTG*CNKLPH
Trigger: ATGTGGTAATTTGTTACAGCATCCAGTGAATGCGGG...TTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTACTTCCATCCCCTCTTaGTATTCACACCCTATCTGT +
Preference number: 4 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGTSIPS*YSHPIC
Trigger: ACAGATAGGGTGTGAATAGCAAGAGGGGATGGAAGT...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTAGTAACACTAACACATaGGCCTCTTCTGGAGCTACT +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKISNTNT*ASSGAT
Trigger: AGTAGCTCCAGAAGAGGCGCATGTGTTAGTGTTACT...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTCAAGTCTCATGCCACTaGTCAATCCAAGAACTCTCA +
Preference number: 4 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFQVSCH*SIQELS
Trigger: TGAGAGTTCTTGGATTGACCAGTGGCATGAGACTTG...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCACGCACTCCTGGAGACTaGCTGTTAAGATTGTATGTA +
Preference number: 4 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPRTPGD*LLRLYV
Trigger: TACATACAATCTTAACAGCCAGTCTCCAGGAGTGCG...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCTCTCTGGTTCACGTTTaGATTTACTCTGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSSLVHV*IYSAPI
Trigger: AATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGA...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTATCTATCATAACAAATaGGACCAAGGCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKIIYHNK*DQGTSC
Trigger: GCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGAT...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTAATTCGTTCCGTGTTTaGAGTCTGAGTAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVNSFRV*SLSRLA
Trigger: TGCAAGCCTACTCAGACTCCAAACACGGAACGAATT...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCAACATATTTTGCCATATaGGAGAATCGGAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIATYFAI*ENRKSS
Trigger: GGAAGACTTCCGATTCTCCCATATGGCAAAATATGT...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp TTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTGGGGTCAGATTGTCACACAGTCGTATaGTTTGGTGCTTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FHWKQYPSSRSRTPLGSDCHTVV*FGACAE
Trigger: CTCAGCACAAGCACCAAACCATACGACTGTGTGACA...ATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTCCAGGGTCCATGCAGTaGAGAATTTTCAGTATCTTG +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVPGSMQ*RIFSIL
Trigger: CAAGATACTGAAAATTCTCCACTGCATGGACCCTGG...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAAAACTGGTCCCACTGCTaGAGCAGATCACACAGGACG +
Preference number: 4 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQNWSHC*SRSHRT
Trigger: CGTCCTGTGTGATCTGCTCCAGCAGTGGGACCAGTT...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCGTAATCCCAGCACTTTaGGAGACTAAGCAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCVIPAL*ETKQGG
Trigger: TCCGCCTTGCTTAGTCTCCCAAAGTGCTGGGATTAC...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp GAAATCTGCACCTTCCACAGTGAGCCGGTGCATTTGGAGAAGGTTTTTGAACATCAAAAACAAGCTGATTaGTGGGCAGACAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: EICTFHSEPVHLEKVFEHQKQAD*WADKKP
Trigger: TGGCTTTTTGTCTGCCCACCAATCAGCTTGTTTTTG...ATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGAAGGTGCAGATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CAA 72 bp CTTGGCAATGCTGATGAATTAAGCCTTGCTTTATTCTaGCATCAGACACGAGGTTCTCCCAGGTATCAGTTG +
Preference number: 4 (lower is better)
Translates to: LGNADELSLALF*HQTRGSPRYQL
Trigger: CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGCATTGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR CAA 72 bp AGAGTCTCTCCAACACCAAAAGTAAGAGAAACATGCTaGGATGACGATTTGGTTCTCCCATATCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: RVSPTPKVRETC*DDDLVLPYHAQ
Trigger: CTGGGCATGATATGGGAGAACCAAATCGTCATCCAAGCATGTTTCTCTTACTTTTGGTGTTGGAGAGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CAA 72 bp ATCCCCCAGATTTTCTTCAACATGCCGCTTCTGTTCTaGGAAGAGTTAACTGCCTCGATTCTGCATAAGAGT +
Preference number: 4 (lower is better)
Translates to: IPQIFFNMPLLF*EELTASILHKS
Trigger: ACTCTTATGCAGAATCGAGGCAGTTAACTCTTCCAAGAACAGAAGCGGCATGTTGAAGAAAATCTGGGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATTGCATAAGGTACCAATaGCTGGTCTCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYCIRYQ*LVSHHL
Trigger: GAGGTGATGGGAGACCAGTCATTGGTACCTTATGCA...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAAGATGAGAGAATTTTCAGCCTaGGATACTTCTTCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: YSCIRHEVLPGISCRLKMREFSA*DTSSSR
Trigger: TCTTGAGGAAGAAGTATCTCAGGCTGAAAATTCTCT...CATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCATCAGGGGATGAGCTCTaGATGACTGGAGACACCACA +
Preference number: 4 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPSGDEL*MTGDTT
Trigger: TGTGGTGTCTCCAGTCATTCAGAGCTCATCCCCTGA...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGAGCACAGAGTTTAGATaGAGGATCACTGCATTTAAT +
Preference number: 4 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKSTEFR*RITAFN
Trigger: ATTAAATGCAGTGATCCTTCATCTAAACTCTGTGCT...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp ATCTATAGCCAAAATATGTTCAACTCCTATGCACTCTACCAAACAACCAAGGCACTCGTGCTGGAAGTCTaGATTCGTTCCGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: IYSQNMFNSYALYQTTKALVLEV*IRSVFG
Trigger: TCCAAACACGGAACGAATTCAGACTTCCAGCACGAG...TGCCTTGGTTGTTTGGTAGAGTGCATAGGAGTTGAACATATTTTGGCTATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGCTCGTGCTGGAAGTCTaGATTCGTTCCGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NIRNNIFSQARISEQCSKLVLEV*IRSVFG
Trigger: TCCAAACACGGAACGAATTCAGACTTCCAGCACGAG...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATTCTGTGAACTCAAGGTaGACAAAACATGTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNSVNSR*TKHVQY
Trigger: ATACTGCACATGTTTTGTTCACCTTGAGTTCACAGA...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACATCTCCCAACTATACTTaGATTCCCATTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETSPNYT*IPIQAV
Trigger: GACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGA...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp CCACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGAGCTCCAATGCTGCCTaGAATAAGCCTTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PLHFFHGNNFCAPITFTKSSNAA*NKPCSF
Trigger: GAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGCT...CTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCGTTTGGTGCTTGTGCTaGGCTCCAATGCTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KREKNSLPVILFVLECSSVWCLC*APMLPE
Trigger: TTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAAC...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCACAGCTTCTAAAGATTTaGTGTGGATGTGTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPQLLKI*CGCVLE
Trigger: CTCTAAAACACATCCACATCAAATCTTTAGAAGCTG...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp GCTGAGCAGGATATTTTCCTGTTTGACCACAGTCAACGAAGACAGCACAAGCAATCTCTTCTAATTGCTTaGGGTGGAAAGTTAACTTGG +
Preference number: 4 (lower is better)
Translates to: AEQDIFLFDHSQRRQHKQSLLIA*GGKLTW
Trigger: CCAAGTTAACTTTCCACCTCAAGCAATTAGAAGAGA...TTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATATCAGGGACGAAATCTaGACCTTCCACAGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNIRDEI*TFHSEP
Trigger: CGGCTCACTGTGGAAGGTGCAGATTTCGTCCCTGAT...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCGAAACCCAAGTCTCATaGCACTGGTCAATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFETQVS*HWSIQE
Trigger: TTCTTGGATTGACCAGTGGCATGAGACTTGGGTTTC...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CCTGTCTACTGTATTGGCTACAGTTTCCAACTGTTTGAGAAGAAAAGGATAGAGCTCCCAGGTATCAGTTaGAGACTGAAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: PVYCIGYSFQLFEKKRIELPGIS*RLKMSM
Trigger: CATGGACATCTTCAGTCTGCAACTGATACCTGGGAG...CTCTATCCTTTTCTTCTCAAACAGTTGGAAACTGTAGCCAATACAGTAGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402796.5
CDS-3UTR GCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAAGAGAACAGATCTGTTaGCGCACTCCTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEREQIC*RTPGDW
Trigger: CCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCT...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCAAAGAAACAGAAGGGTaGTGTTTGGTTAACTCATTC +
Preference number: 4 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSKETEG*CLVNSF
Trigger: GAATGAGTTAACCAAACAGCACCCTTCTGTTTCTTT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTAAAGAAACAGAAGGGTaGTGTTTGGTTAACTCATTC +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELKETEG*CLVNSF
Trigger: GAATGAGTTAACCAAACAGCACCCTTCTGTTTCTTT...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCCATACCAGCACCATCTaGGCAGTTACATCACATGTT +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPHTSTI*AVTSHV
Trigger: AACATGTGATGTAACTGCGCAGATGGTGCTGGTATG...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCATAAGCCAATTCAAATaGTCCTCTGTGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFISQFK*SSVPGL
Trigger: CAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTAT...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCATCAACAAATCCATTCTaGCTTTCTTTGGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIASTNPF*LSLVQM
Trigger: CATCTGAACCAAAGAAAGGCAGAATGGATTTGTTGA...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACAAAAGTAAGAGAAACATaGTTGGATGACGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTKVRET*LDDDLV
Trigger: AACCAAATCGTCATCCAAGCATGTTTCTCTTACTTT...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTAGAGCAAGTGTATCCTaGAACTCAAGAATAGGATGG +
Preference number: 4 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFRASVS*NSRIGW
Trigger: CCATCCTATTCTTGAGTTGCAGGATACACTTGCTCT...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTCAGAAGGGTGCTGTTTaGTTAACTCATTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKIQKGAV*LTHSLV
Trigger: AACCAGAGAATGAGTTAACCAAACAGCACCCTTCTG...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTAAAAGGATAGAGTTCTaGGAAACGAGAGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELKRIEF*ETREKL
Trigger: GAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTT...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCATCTATCATAACAAATaGGACCAAGGCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFIYHNK*DQGTSC
Trigger: GCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGAT...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AGGCAGACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTTTCCAAAGATTTCCCTaGAAATCTTGTACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RQTRMTVEHPARLRSSAGFQRFP*KSCTFC
Trigger: ACAGAAAGTACAAGATTTCCAGGGAAATCTTTGGAA...ACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGTCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp GCTGAGCAGGATATTTTCCTGTTTGACCACAGTCAACGAAGACAGCACAAGCAAACATATTTTGCCATATaGGAGAATCGGAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AEQDIFLFDHSQRRQHKQTYFAI*ENRKSS
Trigger: GGAAGACTTCCGATTCTCCCATATGGCAAAATATGT...TTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGTATTTTCTTGTGACATaGCAGTTGTCACGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLYFLVT*QLSRFP
Trigger: CGGAAACCGTGACAACTGCCATGTCACAAGAAAATA...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGGGTTATCTAACTTGTTaGTGTTACAATTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRGYLTC*CYNCSL
Trigger: CAGTGAACAATTGTAACACCAACAAGTTAGATAACC...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAGAAACCTCAGCCTCCTaGGTTCAGGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEETSAS*VQAILL
Trigger: CAGGAGAATTGCCTGAACCCAGGAGGCTGAGGTTTC...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp CTTACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTAACTCCTTGCTCATGTaGGATTTTAACATACCTCTT +
Preference number: 4 (lower is better)
Translates to: LTTHLRKATSIPSCYSHPNSLLM*DFNIPL
Trigger: AAGAGGTATGTTAAAATCCCACATGAGCAAGGAGTT...AGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp TGTTCTGGCAGCTTTTGCAGACTCACATTTGGGCACCTGTTTAGTACTTCAGTGCAGTTTCCAACTGTTTaGGAAGAAAAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: CSGSFCRLTFGHLFSTSVQFPTV*EEKDRV
Trigger: AACTCTATCCTTTTCTTCTCAAACAGTTGGAAACTG...CACTGAAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTTGGAGAAGTGTCCCATaGATGTGGTTTTGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: RNNIFSQARISEQCSKDIWRSVP*MWFCRK
Trigger: TTTCCGGCAAAACCACATTCATGGGACACTTCTCCA...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATGGCTCTTTAATCTGTaGACTCAAGGTGAACAAAAC +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRWLFNL*TQGEQN
Trigger: GTTTTGTTCACCTTGAGTTCACAGATTAAAGAGCCA...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGAGTTTCCCCGAATCCTaGAAATGTACAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLSFPES*KCTAVF
Trigger: AAAAACAGCTGTACATTTTCAGGATTCGGGGAAACT...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGAAGTTTCCCCGAATCCTaGAAATGTACAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRSFPES*KCTAVF
Trigger: AAAAACAGCTGTACATTTTCAGGATTCGGGGAAACT...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp TTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTGGGGTCAGATAGAAACATGCTTGGATaGCGATTTGGTTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: FHWKQYPSSRSRTPLGSDRNMLG*RFGSPI
Trigger: TATGGGAGAACCAAATCGTCATCCAAGCATGTTTCT...ATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTCCTTTGCAGATCTGTTaGGGCAGCAAGTCAATAGGA +
Preference number: 4 (lower is better)
Translates to: RNNIFSQARISEQCSKDIPLQIC*GSKSIG
Trigger: TCCTATTGACTTGCTGCCTCAACAGATCTGCAAAGG...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAAGAAGTCACTTGCCCTaGACCTTCTCTTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAERSHLP*TFSSSV
Trigger: CACAGAGGAAGAGAAGGTTCAGGGCAAGTGACTTCT...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCGCCTTGCTTTATTCTTaGATCAGACACGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCALLYS*IRHEVL
Trigger: GAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGC...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GCTCCAATGCTGCCTGAAATAAGCCTTGCAGTTTCCCCGAATCCTGAAAATGTAAAAGAAACAGAAGGGTaGTGTTTGGTTAACTCATTC +
Preference number: 4 (lower is better)
Translates to: APMLPEISLAVSPNPENVKETEG*CLVNSF
Trigger: GAATGAGTTAACCAAACAGCACCCTTCTGTTTCTTT...TACATTTTCAGGATTCGGGGAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp GCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCTGGAAATGCTGCTGCTaGCTGAAGCAGAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: AFLPWKQFLCSDYFHKASWKCCC*LKQRIF
Trigger: GAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCA...GCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGCACTCGCTCACCAACTaGAGGCTGTTTAGAGATAAC +
Preference number: 4 (lower is better)
Translates to: NIRNNIFSQARISEQCSKHSLTN*RLFRDN
Trigger: GTTATCTCTAAACAGCCTGCAGTTGGTGAGCGAGTG...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000402796.5
CDS-3UTR GCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCCTATTTCTTTTACCTaGTCCACCGTCAATAATCCA +
Preference number: 4 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGPISFT*STVNNP
Trigger: TGGATTATTGACGGTGGAGCAGGTAAAAGAAATAGG...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGTGTTCTGGCAGCTTTTaGAGACTCACATTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: NIRNNIFSQARISEQCSKCSGSF*RLTFGH
Trigger: GTGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACA...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTTACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTGGAATGTTCATCCTTTaGCCTTTTAACTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: LTTHLRKATSIPSCYSHPGMFIL*PFNSKN
Trigger: ATTTTTGGAGTTAAAAGGGCAAAGGATGAACATTCC...AGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp TTTCAACAAAAACAAGCTGATTGGTGGGCAGACAAAAAGCCATATTACATGCCCATGTCAGTCAGCTCGTaGTGGAAGTCTGAATTCGTT +
Preference number: 4 (lower is better)
Translates to: FQQKQADWWADKKPYYMPMSVSS*WKSEFV
Trigger: AACGAATTCAGACTTCCAGCACGAGCTGACTGACAT...GGGCATGTAATATGGCTTTTTGTCTGCCCACCAATCAGCTTGTTTTTGTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGTCCACAGTGAGCCGGTaGATTTGGAGAAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: NIRNNIFSQARISEQCSKSTVSR*IWRRFL
Trigger: CAAAAACCTTCTCCAAATGCACCGGCTCACTGTGGA...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AGGCTGTCCGTTAGGCTCGGGGAACTTGATTCAAGGACTTGTATGGCTGAATTAAAAGTAAGAGAAACATaGTTGGATGACGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: RLSVRLGELDSRTCMAELKVRET*LDDDLV
Trigger: AACCAAATCGTCATCCAAGCATGTTTCTCTTACTTT...TAATTCAGCCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATGTTCAACATGTTTCCTaGAGATTTAGTGGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNVQHVS*RFSGGK
Trigger: TTTTCCTCCACTAAATCTGCAGGAAACATGTTGAAC...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp GCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCCACCACCAGAGTCCTaGAACACAGATTTTGAACAT +
Preference number: 4 (lower is better)
Translates to: AFLPWKQFLCSDYFHKASPPPES*NTDFEH
Trigger: ATGTTCAAAATCTGTGTTGCAGGACTCTGGTGGTGG...GCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCCAAGTCTCATGCCACTaGTCAATCCAAGAACTCTCA +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCQVSCH*SIQELS
Trigger: TGAGAGTTCTTGGATTGACCAGTGGCATGAGACTTG...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp CCACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGTCTCATGCCACTaGTCAATCCAAGAACTCTCA +
Preference number: 4 (lower is better)
Translates to: PLHFFHGNNFCAPITFTKQVSCH*SIQELS
Trigger: TGAGAGTTCTTGGATTGACCAGTGGCATGAGACTTG...CTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATCTCTGGTTCACGTTTaGATTTACTCTGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRSLVHV*IYSAPI
Trigger: AATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGA...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTTCTCTGGTTCACGTTTaGATTTACTCTGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKISLVHV*IYSAPI
Trigger: AATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGA...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCCAGAAGGGTGCTGTTTaGTTAACTCATTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFQKGAV*LTHSLV
Trigger: AACCAGAGAATGAGTTAACCAAACAGCACCCTTCTG...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTCTGGAGACACCACAGTaGAAAGCCTGTAGGACATCA +
Preference number: 4 (lower is better)
Translates to: CKTQNCSLSSISNIRNNILETPQ*KACRTS
Trigger: TGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAG...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp GCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCAATTCGTTCCGTGTTTaGAGTCTGAGTAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: AFLPWKQFLCSDYFHKASNSFRV*SLSRLA
Trigger: TGCAAGCCTACTCAGACTCCAAACACGGAACGAATT...GCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAGGTCCTGATGGCAAATaGTCAGCGCAGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIGPDGK*SAQQLA
Trigger: TGCAAGTTGCTGCGCTGACCATTTGCCATCAGGACC...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATATCTGCCAGTCCAACATaGCAAGTGTCCCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADISASPT*QVSPDR
Trigger: TCTGTCAGGGGACACTTGCCATGTTGGACTGGCAGA...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp CATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCGTGAGCCGGTGCATTTaGAGAAGGTTTTTGAACATG +
Preference number: 4 (lower is better)
Translates to: HFFHGNNFCAPITFTKQAVSRCI*RRFLNM
Trigger: CATGTTCAAAAACCTTCTCCAAATGCACCGGCTCAC...GGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATTGTCACACAGTCGTATaGTTTGGTGCTTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYCHTVV*FGACAE
Trigger: CTCAGCACAAGCACCAAACCATACGACTGTGTGACA...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
3UTR CAA 72 bp AGAGTCTCTCCAACACCAAAAGTAAGAGAAACATGCTaGGATGACGATTTGGTTCTCCCATATCACTGTCTA +
Preference number: 4 (lower is better)
Translates to: RVSPTPKVRETC*DDDLVLPYHCL
Trigger: TAGACAGTGATATGGGAGAACCAAATCGTCATCCAAGCATGTTTCTCTTACTTTTGGTGTTGGAGAGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
3UTR CAA 72 bp CAATTCTCAAATGTATTCCTAACCCCTGATAACTCCTaGCTCATGTGGGATTTTAACATACCTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QFSNVFLTPDNS*LMWDFNIPLGQ
Trigger: CTGGCCAAGAGGTATGTTAAAATCCCACATGAGCAAGGAGTTATCAGGGGTTAGGAATACATTTGAGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTAGCACAGAGTTTAGATaGAGGATCACTGCATTTAAT +
Preference number: 4 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKISTEFR*RITAFN
Trigger: ATTAAATGCAGTGATCCTTCATCTAAACTCTGTGCT...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTAGCACAGAGTTTAGATaGAGGATCACTGCATTTAAT +
Preference number: 4 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGSTEFR*RITAFN
Trigger: ATTAAATGCAGTGATCCTTCATCTAAACTCTGTGCT...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCAAAGAGAAGTGTGGATaGATTTCGCACTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: KREKNSLPVILFVLECSSKEKCG*ISHCPD
Trigger: GTCTGGGCAGTGCGAAATTCATCCACACTTCTCTTT...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTAAAGTTTCAAGGTCCTaGTGGCAAATGGTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIKVSRS*WQMVSA
Trigger: TGCGCTGACCATTTGCCATCAGGACCTTGAAACTTT...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATGTGACACTCCATCCGTaGGTTGCACACAATGTAACA +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNVTLHP*VAHNVT
Trigger: TGTTACATTGTGTGCAACTCACGGATGGAGTGTCAC...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp CCACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGACACTGCTAATCAAATaGGGAATCTTTTCAGACGGG +
Preference number: 4 (lower is better)
Translates to: PLHFFHGNNFCAPITFTKTLLIK*GIFSDG
Trigger: CCCGTCTGAAAAGATTCCTCATTTGATTAGCAGTGT...CTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474159.6
CDS-3UTR TCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCTGGCTCTTTAATCTGTaGACTCAAGGTGAACAAAAC +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPWLFNL*TQGEQN
Trigger: GTTTTGTTCACCTTGAGTTCACAGATTAAAGAGCCA...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCAGTTTCCCCGAATCCTaGAAATGTACAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPSFPES*KCTAVF
Trigger: AAAAACAGCTGTACATTTTCAGGATTCGGGGAAACT...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCACTATCTCCCTTCACTaGAACATAAGCTCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCTISLH*NISSKG
Trigger: TCCTTTGGAGCTTATGTTTCAGTGAAGGGAGATAGT...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp CACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCAAATCATCAGGAAACTCCCAGGTATCAGTTaGAGACTGAAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: HLCNIPAKMYSMNQIIRKLPGIS*RLKMSM
Trigger: CATGGACATCTTCAGTCTGCAACTGATACCTGGGAG...TTTCCTGATGATTTGATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCTGGAAACAATTTCTGTaGTCCGATTACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSWKQFL*SDYFHK
Trigger: TTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCA...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCAAAAGAAACAGAAGGGTaGTGTTTGGTTAACTCATTC +
Preference number: 4 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPKETEG*CLVNSF
Trigger: GAATGAGTTAACCAAACAGCACCCTTCTGTTTCTTT...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCAGATCCAGGAAACAATaGTTCAAAAAGACTGTTACA +
Preference number: 4 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSRSRKQ*FKKTVT
Trigger: TGTAACAGTCTTTTTGAAGCATTGTTTCCTGGATCT...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTCGAGGCTGAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATAGATCCAGGAAACAATaGTTCAAAAAGACTGTTACA +
Preference number: 4 (lower is better)
Translates to: LEAESHSESSVSGLLTLNRSRKQ*FKKTVT
Trigger: TGTAACAGTCTTTTTGAAGCATTGTTTCCTGGATCT...ATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTCAGCCTCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATTGGAAATGCTGCTGCTaGCTGAAGCAGAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYWKCCC*LKQRIF
Trigger: GAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCA...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGCATACCAGCACCATCTaGGCAGTTACATCACATGTT +
Preference number: 4 (lower is better)
Translates to: NIRNNIFSQARISEQCSKHTSTI*AVTSHV
Trigger: AACATGTGATGTAACTGCGCAGATGGTGCTGGTATG...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTGAAGCTGGCACAACATaGCTAAAAGTAAAGCAACTT +
Preference number: 4 (lower is better)
Translates to: ISFRIICKRLADSESVSIEAGTT*LKVKQL
Trigger: AAGTTGCTTTACTTTTAGGCATGTTGTGCCAGCTTC...AATGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCCCTATTTCTTTTACCTaGTCCACCGTCAATAATCCA +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPPISFT*STVNNP
Trigger: TGGATTATTGACGGTGGAGCAGGTAAAAGAAATAGG...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CCACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGACTCCATCCGTGAGTTaGACACAATGTAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: PLHFFHGNNFCAPITFTKTPSVS*TQCNSK
Trigger: TTTGCTGTTACATTGTGTGCAACTCACGGATGGAGT...CTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp ACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCATTCTCCACACATGTCTaGATGTGGTGGGAAATGACT +
Preference number: 4 (lower is better)
Translates to: TAFLPWKQFLCSDYFHKAFSTHV*MWWEMT
Trigger: AGTCATTTCCCACCACATGCAGACATGTGTGGAGAA...TGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATGACCATTTTTCAGCCTaGCATCCCCACGTGAATAAG +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNDHFSA*HPHVNK
Trigger: CTTATTCACGTGGGGATGGCAGGCTGAAAAATGGTC...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGCAAGTCTCATGCCACTaGTCAATCCAAGAACTCTCA +
Preference number: 4 (lower is better)
Translates to: NIRNNIFSQARISEQCSKQVSCH*SIQELS
Trigger: TGAGAGTTCTTGGATTGACCAGTGGCATGAGACTTG...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACATCTCTGGTTCACGTTTaGATTTACTCTGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETSLVHV*IYSAPI
Trigger: AATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGA...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCCATTCCATTAGTGTTTaGAAACGACCAACATCAATA +
Preference number: 4 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSHSISV*KRPTSI
Trigger: TATTGATGTTGGTCGTTTCCAAACACTAATGGAATG...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTGCTCCTGTTATACAGTaGACTCGCCCATACATTGGA +
Preference number: 4 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIAPVIQ*TRPYIG
Trigger: TCCAATGTATGGGCGAGTCCACTGTATAACAGGAGC...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAAATGCTCCTCTGTGCCTaGACTGCAAAAGGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQMLLCA*TAKGVV
Trigger: AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCAT...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCACCTGTCTACTGTATTaGCTACAGTTTCCAACTGTT +
Preference number: 4 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFTCLLY*LQFPTV
Trigger: AACAGTTGGAAACTGTAGCCAATACAGTAGACAGGT...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402796.5
CDS-3UTR CCA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATTTCCAAAGATTTCCCTaGAAATCTTGTACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNFQRFP*KSCTFC
Trigger: ACAGAAAGTACAAGATTTCCAGGGAAATCTTTGGAA...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAAATGGATTTTGCCTCTTaGCCAGCCAGAGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQMDFAS*PARVWL
Trigger: AAGCCAAACTCTGGCTGGCCAAGAGGCAAAATCCAT...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp CCTGTCTACTGTATTGGCTACAGTTTCCAACTGTTTGAGAAGAAAAGGATAGAGTTAGTATCTCGAGGCTaGATCTCATTCAGAATCATC +
Preference number: 4 (lower is better)
Translates to: PVYCIGYSFQLFEKKRIELVSRG*ISFRII
Trigger: GATGATTCTGAATGAGATTCAGCCTCGAGATACTAA...CTCTATCCTTTTCTTCTCAAACAGTTGGAAACTGTAGCCAATACAGTAGACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402796.5
CDS-3UTR TCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCAATATAATGGATTTGTaGCACTCCATCCGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCNIMDL*HSIREL
Trigger: CAACTCACGGATGGAGTGTCACAAATCCATTATATT...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp CATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCAATATAATGGATTTGTaGCACTCCATCCGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: HFFHGNNFCAPITFTKQANIMDL*HSIREL
Trigger: CAACTCACGGATGGAGTGTCACAAATCCATTATATT...GGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCTCTCCCAACTATACTTaGATTCCCATTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KREKNSLPVILFVLECSSSPNYT*IPIQAV
Trigger: GACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGA...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR TCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAAGCTCCAATGCTGCCTaGAATAAGCCTTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADISSNAA*NKPCSF
Trigger: GAAACTGCAAGGCTTATTTCAGGCAGCATTGGAGCT...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAAGAATGCGTAGTCTTGTaGACTCCACTGTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQECVVL*TPLSSQ
Trigger: TTGTGAAGACAGTGGAGTTCACAAGACTACGCATTC...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR TCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCAAGGCAGAAACCATTTaGCTAATCTCAAATCAGTCC +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCKAETI*LISNQS
Trigger: GGACTGATTTGAGATTAGTCAAATGGTTTCTGCCTT...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp GCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTATTACAAGACCTGTaGACTCAAGGTGAACAAAAC +
Preference number: 4 (lower is better)
Translates to: AFLPWKQFLCSDYFHKASLLQDL*TQGEQN
Trigger: GTTTTGTTCACCTTGAGTTCACAGGTCTTGTAATAG...GCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474159.6
CDS-3UTR GCA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACATATGTTCAACTCCTATaGACTCTACCAAACAACCAA +
Preference number: 4 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETYVQLL*TLPNNQ
Trigger: TTGGTTGTTTGGTAGAGTGCATAGGAGTTGAACATA...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCAAGGATGGGAAAGATTaGTCTTGTCCAGTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCKDGKD*SCPVLA
Trigger: TGCTAAAACTGGACAAGAGCAATCTTTCCCATCCTT...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATACTCCCAGGTATCAGTTaGAGACTGAAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADILPGIS*RLKMSM
Trigger: CATGGACATCTTCAGTCTGCAACTGATACCTGGGAG...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATGGAAACAATTTCTGTaGTCCGATTACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRWKQFL*SDYFHK
Trigger: TTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCA...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp CAGTATAAGCCAATTCAAATGCTCCTCTGTGCCTGGACTGCAAAAGGTGTTGTTAGATCCAGGAAACAATaGTTCAAAAAGACTGTTACA +
Preference number: 4 (lower is better)
Translates to: QYKPIQMLLCAWTAKGVVRSRKQ*FKKTVT
Trigger: TGTAACAGTCTTTTTGAAGCATTGTTTCCTGGATCT...AACAACACCTTTTGCAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTATACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCTGGAAATGCTGCTGCTaGCTGAAGCAGAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: KREKNSLPVILFVLECSSWKCCC*LKQRIF
Trigger: GAAAATTCTCTGCTTCAGGCAGCAGCAGCATTTCCA...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTATACATTGGAAATGCTaGTGCTGCCTGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIIHWKC*CCLKQR
Trigger: TCTCTGCTTCAGGCAGCAGCAGCATTTCCAATGTAT...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATACACTCGCTCACCAACTaGAGGCTGTTTAGAGATAAC +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIHSLTN*RLFRDN
Trigger: GTTATCTCTAAACAGCCTGCAGTTGGTGAGCGAGTG...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp CATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTTCAGATGCCAACAGTaGCTGTATGTAGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: HFFHGNNFCAPITFTKQAFRCQQ*LYVERN
Trigger: ATTCCTTTCTACATACAGGCACTGTTGGCATCTGAA...GGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTTTTCTTTGGTTCAGATaGCAACAGTGCCTGTATGTA +
Preference number: 4 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIFLWFR*QQCLYV
Trigger: TACATACAGGCACTGTTGGCATCTGAACCAAAGAAA...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCTCAACAAATCCATTCTaGCTTTCTTTGGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFSTNPF*LSLVQM
Trigger: CATCTGAACCAAAGAAAGGCAGAATGGATTTGTTGA...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTGGAATGTTCATCCTTTaGCCTTTTAACTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGGMFIL*PFNSKN
Trigger: ATTTTTGGAGTTAAAAGGGCAAAGGATGAACATTCC...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAACTCCATCCGTGAGTTaGACACAATGTAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: TAFLPWKQFLCSDYFHKATPSVS*TQCNSK
Trigger: TTTGCTGTTACATTGTGTGCAACTCACGGATGGAGT...TGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATCGAGAAGTAAAACGGTaGATAGCCTCAGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYREVKR*IASGRK
Trigger: TTTTCTACCTGAGGCTATGCACCGTTTTACTTCTCG...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAGGTGAACAAAACATGTaGAGTATCCAAGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIGEQNM*SIQEQG
Trigger: GCCCTGCTCTTGGATACTGCACATGTTTTGTTCACC...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp CACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCAAATCATCAGGAAAATGGCTTGCTCCATTTaGATTACCTCCCAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: HLCNIPAKMYSMNQIIRKMACSI*ITSQLS
Trigger: AGACAACTGGGAGGTAATGCAAATGGAGCAAGCCAT...TTTCCTGATGATTTGATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATCAGAAGGGTGCTGTTTaGTTAACTCATTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYQKGAV*LTHSLV
Trigger: AACCAGAGAATGAGTTAACCAAACAGCACCCTTCTG...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp AGCTATCAATTCCCTGTTCTCCACACATGTCTGCATGTGGTGGGAAATGACTTTCATTCCATTAGTGTTTaGAAACGACCAACATCAATA +
Preference number: 4 (lower is better)
Translates to: SYQFPVLHTCLHVVGNDFHSISV*KRPTSI
Trigger: TATTGATGTTGGTCGTTTCCAAACACTAATGGAATG...AAAGTCATTTCCCACCACATGCAGACATGTGTGGAGAACAGGGAATTGATAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGACATTCCATTAGTGTTTaGAAACGACCAACATCAATA +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRHSISV*KRPTSI
Trigger: TATTGATGTTGGTCGTTTCCAAACACTAATGGAATG...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCAAAAGGATAGAGTTCTaGGAAACGAGAGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPKRIEF*ETREKL
Trigger: GAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTT...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTCCAAAGATTTCCCTaGAAATCTTGTACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: FLRREQICCRTPGDWLLRFQRFP*KSCTFC
Trigger: ACAGAAAGTACAAGATTTCCAGGGAAATCTTTGGAA...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATTCTCAGAGCATCCAATaGATGTTCCCAATGGGTATA +
Preference number: 4 (lower is better)
Translates to: IRNNIFSQARISEQCSKDSQSIQ*MFPMGI
Trigger: TATACCCATTGGGAACATCCATTGGATGCTCTGAGA...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp ATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTAACATGATTTTGGTTTaGTGTCTCAGAGCATCCAAT +
Preference number: 4 (lower is better)
Translates to: ISFRIICKRLADSESVSINMILV*CLRASN
Trigger: ATTGGATGCTCTGAGACACCAAACCAAAATCATGTT...AATGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCGTGAGCCGGTGCATTTaGAGAAGGTTTTTGAACATG +
Preference number: 4 (lower is better)
Translates to: KREKNSLPVILFVLECSSVSRCI*RRFLNM
Trigger: CATGTTCAAAAACCTTCTCCAAATGCACCGGCTCAC...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCGCTTGGATGACGATTTaGTTCTCCCATATCACTGTC +
Preference number: 4 (lower is better)
Translates to: KREKNSLPVILFVLECSSAWMTI*FSHITV
Trigger: GACAGTGATATGGGAGAACCAAATCGTCATCCAAGC...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAAAGAAGCACCTTGTTTaGGACTGTGAATATCCTCGG +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEKKHLV*DCEYPR
Trigger: CCGAGGATATTCACAGTCCCAAACAAGGTGCTTCTT...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CAA 72 bp ACTTATTCTTCCTGGTCTAGGAAAGGCAGAAACCATTaGACTAATCTCAAATCAGTCCTACCACTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TYSSWSRKGRNH*TNLKSVLPLKF
Trigger: GAACTTCAGTGGTAGGACTGATTTGAGATTAGTCAAATGGTTTCTGCCTTTCCTAGACCAGGAAGAATAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTCAGTTTCCAACTGTTTaGGAAGAAAAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIQFPTV*EEKDRV
Trigger: AACTCTATCCTTTTCTTCTCAAACAGTTGGAAACTG...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp ACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAATATAATGGATTTGTaGCACTCCATCCGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: TAFLPWKQFLCSDYFHKANIMDL*HSIREL
Trigger: CAACTCACGGATGGAGTGTCACAAATCCATTATATT...TGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAAATAAGACAGCTGACTaGGAGATGTCACCACAACAG +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADINKTAD*EMSPQQ
Trigger: CTGTTGTGGTGACATCTCTCAGTCAGCTGTCTTATT...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCGATGATAATGAAGGATaGATTTACATCTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCDDNEG*IYISHP
Trigger: AGGATGGGAGATGTAAATTCATCCTTCATTATCATC...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAGCCTTGCTTTATTCTTaGATCAGACACGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIALLYS*IRHEVL
Trigger: GAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGC...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCTTTAGAGATAACTTCTaGAAAGCTCCTGTTATACAG +
Preference number: 4 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFFRDNF*KAPVIQ
Trigger: CTGTATAACAGGAGCTTTGCAGAAGTTATCTCTAAA...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATCTATAGCCAAAATATGTTCAACTCCTATGCACTCTACCAAACAACCAAGGCAGAAGCTGGCACAACATaGCTAAAAGTAAAGCAACTT +
Preference number: 4 (lower is better)
Translates to: IYSQNMFNSYALYQTTKAEAGTT*LKVKQL
Trigger: AAGTTGCTTTACTTTTAGGCATGTTGTGCCAGCTTC...TGCCTTGGTTGTTTGGTAGAGTGCATAGGAGTTGAACATATTTTGGCTATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAATAAGCCAATTCAAATaGTCCTCTGTGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIISQFK*SSVPGL
Trigger: CAGTCCAGGCACAGAGGAGCATTTGAATTGGCTTAT...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAATGTCAGTCAGCTCGTaGTGGAAGTCTGAATTCGTT +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIMSVSS*WKSEFV
Trigger: AACGAATTCAGACTTCCAGCACGAGCTGACTGACAT...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCGAGAAGTAAAACGGTaGATAGCCTCAGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNREVKR*IASGRK
Trigger: TTTTCTACCTGAGGCTATGCACCGTTTTACTTCTCG...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp CATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCCCAAAAGTTGACTTCTaGTTTTTCAAACAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: HFFHGNNFCAPITFTKQAPKVDF*FFKQVV
Trigger: GACTACCTGTTTGAAAAAGCAGAAGTCAACTTTTGG...GGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR GCA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCCACCATTATCACCTATaGAACATTCCTGCAAAAATG +
Preference number: 4 (lower is better)
Translates to: SQLSNIITMALSHCPITCHHYHL*NIPAKM
Trigger: CATTTTTGCAGGAATGTTGCATAGGTGATAATGGTG...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCTAAAATCTGTTCCTTaGCTCTTCCAGCTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNLKSVP*LFQLLA
Trigger: TGCTAGAAGCTGGAAGAGGCAAGGAACAGATTTTAG...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCCAGAAGGGTGCTGTTTaGTTAACTCATTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KREKNSLPVILFVLECSSQKGAV*LTHSLV
Trigger: AACCAGAGAATGAGTTAACCAAACAGCACCCTTCTG...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CCTGTCTACTGTATTGGCTACAGTTTCCAACTGTTTGAGAAGAAAAGGATAGAGATAAATTCTGCCTTCTaGGACATGAAAAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: PVYCIGYSFQLFEKKRIEINSAF*DMKNFS
Trigger: GCTGAAGTTTTTCATGTCCCAGAAGGCAGAATTTAT...CTCTATCCTTTTCTTCTCAAACAGTTGGAAACTGTAGCCAATACAGTAGACAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402796.5
CDS-3UTR CCA 90 bp CTGTTTGAGAAGAAAAGGATAGAGTTCTGGGAAACGAGAGAAAAACTCTCTCCCCATTCCATTAGTGTTTaGAAACGACCAACATCAATA +
Preference number: 4 (lower is better)
Translates to: LFEKKRIEFWETREKLSPHSISV*KRPTSI
Trigger: TATTGATGTTGGTCGTTTCCAAACACTAATGGAATG...GGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CCA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATACATATTTTGCCATATaGGAGAATCGGAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYTYFAI*ENRKSS
Trigger: GGAAGACTTCCGATTCTCCCATATGGCAAAATATGT...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CCA 90 bp ACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAACATATTTTGCCATATaGGAGAATCGGAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TAFLPWKQFLCSDYFHKATYFAI*ENRKSS
Trigger: GGAAGACTTCCGATTCTCCCATATGGCAAAATATGT...TGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR TCA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCAAGAGAATTTTCAGCCTaGGATACTTCTTCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPREFSA*DTSSSR
Trigger: TCTTGAGGAAGAAGTATCTCAGGCTGAAAATTCTCT...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR TCA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCATCTGTGAACTCAAGGTaGACAAAACATGTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPSVNSR*TKHVQY
Trigger: ATACTGCACATGTTTTGTTCACCTTGAGTTCACAGA...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR TCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATTCTGTGAACTCAAGGTaGACAAAACATGTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNSVNSR*TKHVQY
Trigger: ATACTGCACATGTTTTGTTCACCTTGAGTTCACAGA...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR TCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAATAGTAGTCACTCAGTaGCTCATTAGACTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEIVVTQ*LIRLRG
Trigger: TCCTCTTAGTCTAATGAGTCACTGAGTGACTACTAT...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTTGGAAACAATTTCTGTaGTCCGATTACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIWKQFL*SDYFHK
Trigger: TTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCA...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAAGAAGCTGGCACAACATaGCTAAAAGTAAAGCAACTT +
Preference number: 4 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQEAGTT*LKVKQL
Trigger: AAGTTGCTTTACTTTTAGGCATGTTGTGCCAGCTTC...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCATTTCTTTGGTTCAGATaGCAACAGTGCCTGTATGTA +
Preference number: 4 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPFLWFR*QQCLYV
Trigger: TACATACAGGCACTGTTGGCATCTGAACCAAAGAAA...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CAACAGAGTTCGAATGGTATTAGGAATGTGATCTATCATAACAAATGGGACCAAAGATTTTCTTCAACATaGCGCTTCTGTTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QQSSNGIRNVIYHNKWDQRFSST*RFCSWK
Trigger: CTTCCAAGAACAGAAGCGGCATGTTGAAGAAAATCT...TTGGTCCCATTTGTTATGATAGATCACATTCCTAATACCATTCGAACTCTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
3UTR CAA 72 bp TTCTTATACTGCTGTAAAGAAACAGAAGGGTGCTGTTaGGTTAACTCATTCTCTGGTTCACGTTTGGATTTA +
Preference number: 4 (lower is better)
Translates to: FLYCCKETEGCC*VNSFSGSRLDL
Trigger: TAAATCCAAACGTGAACCAGAGAATGAGTTAACCAAACAGCACCCTTCTGTTTCTTTACAGCAGTATAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR GCA 90 bp ACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCATTTAGAGATAACTTCTaGAAAGCTCCTGTTATACAG +
Preference number: 4 (lower is better)
Translates to: TAFLPWKQFLCSDYFHKAFRDNF*KAPVIQ
Trigger: CTGTATAACAGGAGCTTTGCAGAAGTTATCTCTAAA...TGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR GCA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCATCAACAAATCCATTCTaGCTTTCTTTGGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPSTNPF*LSLVQM
Trigger: CATCTGAACCAAAGAAAGGCAGAATGGATTTGTTGA...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp CACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCAAATCATCAGGAAAAAACTTAAGAATATCTaGAAGGACCCTTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: HLCNIPAKMYSMNQIIRKKLKNI*KDPSSM
Trigger: CATGGAAGAAGGGTCCTTGCAGATATTCTTAAGTTT...TTTCCTGATGATTTGATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAAGATGCAGCTACAACTaGTTTAAATGTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAERCSYN*FKCAEN
Trigger: GTTTTCTGCACATTTAAAGCAGTTGTAGCTGCATCT...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATAACATGATTTTGGTTTaGTGTCTCAGAGCATCCAAT +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNNMILV*CLRASN
Trigger: ATTGGATGCTCTGAGACACCAAACCAAAATCATGTT...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAAAACAAGCTGATTGGTaGGCAGACAAAAAGCCATAT +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIKQADW*ADKKPY
Trigger: ATATGGCTTTTTGTCTGCCCACCAATCAGCTTGTTT...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR GCA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCTGGAAACAATTTCTGTaGTCCGATTACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: KREKNSLPVILFVLECSSWKQFL*SDYFHK
Trigger: TTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCA...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR GCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAATGGAAACAATTTCTGTaGTCCGATTACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEWKQFL*SDYFHK
Trigger: TTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCA...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAAGATCCAGGAAACAATaGTTCAAAAAGACTGTTACA +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAERSRKQ*FKKTVT
Trigger: TGTAACAGTCTTTTTGAAGCATTGTTTCCTGGATCT...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATTTCTTCTCTTCTAATTaGTTGAGGTGGAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNFFSSN*LRWKVN
Trigger: GTTAACTTTCCACCTCAAGCAATTAGAAGAGAAGAA...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAATAAATTCTGCCTTCTaGGACATGAAAAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIINSAF*DMKNFS
Trigger: GCTGAAGTTTTTCATGTCCCAGAAGGCAGAATTTAT...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CCA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAATTCCAAAGATTTCCCTaGAAATCTTGTACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEFQRFP*KSCTFC
Trigger: ACAGAAAGTACAAGATTTCCAGGGAAATCTTTGGAA...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CCA 90 bp CACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCAAATCATCAGGAAAGAGTCTCAGAAGGACTaGTGTAATTCTTCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: HLCNIPAKMYSMNQIIRKESQKD*CNSSLN
Trigger: ATTTAAAGAAGAATTACACCAGTCCTTCTGAGACTC...TTTCCTGATGATTTGATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
3UTR CAA 72 bp TCTTCTCAAGTCACTAATTGTCATGTTTCTAGAAACTaGTCCATTTCATGTAGGTTATCTAACTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSQVTNCHVSRN*SISCRLSNLLV
Trigger: CACCAACAAGTTAGATAACCTACATGAAATGGACAAGTTTCTAGAAACATGACAATTAGTGACTTGAGAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR GCA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAAGATCCAGGAAACAATaGTTCAAAAAGACTGTTACA +
Preference number: 4 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIRSRKQ*FKKTVT
Trigger: TGTAACAGTCTTTTTGAAGCATTGTTTCCTGGATCT...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS CCA 90 bp GTAGTCACTCGTGCACGTCGGCGTCTGAGAAGAGTCGCAGGCGCCTaGTCCAGTCCCGGAAGCAGGTCTCCTTCTACGGCGTCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: VVTRARRRLRRVAGA*SSPGSRSPSTASPR
Trigger: CCTCGGAGACGCCGTAGAAGGAGACCTGCTTCCGGGACTGGACCAGGCGCCTGCGACTCTTCTCAGACGCCGACGTGCACGAGTGACTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398653.5
ENST00000404790.5
ENST00000405975.7
ENST00000408045.7
CDS CCA 90 bp CAGTTTCACAGCCGCCGAATCCTGGCGATACCAAAGGATGGGAATTaGTGTGGCTCGCCAGGCAGCCCTAGCAAAACTGGCCGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: QFHSRRILAIPKDGN*CGSPGSPSKTGRAE
Trigger: CTCGGCTCGGCCAGTTTTGCTAGGGCTGCCTGGCGAGCCACACCAATTCCCATCCTTTGGTATCGCCAGGATTCGGCGGCTGTGAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405006.8
CDS-3UTR CAA 90 bp TCATCACTCTCTCCCAACAGCCATCCCAGCAGGATGGGCAGTCCAGGGGCCAACCACCAAACATGGATTTaGCCTCTTGGCCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: SSLSPNSHPSRMGSPGANHQTWI*PLGQPE
Trigger: CTCTGGCTGGCCAAGAGGCAAAATCCATGTTTGGTG...GTTGGCCCCTGGACTGCCCATCCTGCTGGGATGGCTGTTGGGAGAGAGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS TCA 90 bp CCTGGCAGAAGGCAAACTCTGCAGAAGGAGATCGGGCCTTGGCACTaGGCCATCCCACAAGCAAGTGCCCCTGCCTTGCTCAGTTCATTT +
Preference number: 5 (lower is better)
Translates to: PGRRQTLQKEIGPWH*AIPQASAPALLSSF
Trigger: AAATGAACTGAGCAAGGCAGGGGCACTTGCTTGTGGGATGGCTCAGTGCCAAGGCCCGATCTCCTTCTGCAGAGTTTGCCTTCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467668.1
CDS-3UTR CAA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTTCCCGCTCTCCACTCTaGGCTGCCGCGGCCCACACT +
Preference number: 5 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKISRSPL*AAAAHT
Trigger: AGTGTGGGCCGCGGCAGCCAAGAGTGGAGAGCGGGA...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp CCAACAATAAGAACTTCTCTCCCATGTTGCACAGCAAGGGTGGCACGCCCTTCTAACTTCTCTCCCATGTaGCACAGCAAGGGTGGCACG +
Preference number: 5 (lower is better)
Translates to: PTIRTSLPCCTARVARPSNFSPM*HSKGGT
Trigger: CGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTT...AGAAGGGCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTTCTTATTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp GAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACACCAACTTGTGACATGGCAGTaGTCACGGTTTCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ESRRSTIHRGSVESLQHQLVTWQ*SRFPWL
Trigger: CAGCCACGGAAACCGTGACAACTGCCATGTCACAAG...TTGGTGTTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS CCA 90 bp CCTTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTTaGGGTCAGATGGACACAGTGCTCCGTCTGGGGAAGCCACTCACC +
Preference number: 5 (lower is better)
Translates to: PFIGSNIHRPDQELL*GQMDTVLRLGKPLT
Trigger: GGTGAGTGGCTTCCCCAGACGGAGCACTGTGTCCATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS-3UTR CAA 90 bp CAAAACATGTGCAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATGCTTCCAGCCAGAGTTTGGCTTaGGTACAAACAGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: QNMCSIQEQGLPTPTHASSQSLA*VQTVMS
Trigger: TGACATCACTGTTTGTACCAAAGCCAAACTCTGGCT...GGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTGCACATGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAGAGTTAGGCTCGGGGAACTaGATTCAAGGACTTGTATGG +
Preference number: 5 (lower is better)
Translates to: CGFAGNTGQCSWGVWTTELGSGN*IQGLVW
Trigger: CCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAA...CTCTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp CAAAACATGTGCAGTATCCAAGAGCAGGGCCTCCCCACTCCGACCCATGCTTCCGTCTCGGCCCAAAAGTaGACTTCTGCTTTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: QNMCSIQEQGLPTPTHASVSAQK*TSAFSN
Trigger: GTTTGAAAAAGCAGAAGTCAACTTTTGGGCCGAGAC...GGAAGCATGGGTCGGAGTGGGGAGGCCCTGCTCTTGGATACTGCACATGTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS TCA 90 bp TCATGCTTCCCTTTAGAACGCTGCTTCACTCTACACCTTCCTGGCTaGCTCCCACAAACATTCTCTGGGCGATTTCTGAACCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: SCFPLERCFTLHLPG*LPQTFSGRFLNHVE
Trigger: CTCCACGTGGTTCAGAAATCGCCCAGAGAATGTTTGTGGGAGTCAGCCAGGAAGGTGTAGAGTGAAGCAGCGTTCTAAAGGGAAGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405006.8
CDS-3UTR CAA 90 bp TGTCACACAGTCGTATGGTTTGGTGCTTGTGCTGAGCTCCAATGCTGCCTGAAAAAGAGAACAGATCTGTaGCCGCACTCCTGGAGACTG +
Preference number: 5 (lower is better)
Translates to: CHTVVWFGACAELQCCLKKRTDL*PHSWRL
Trigger: CAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTT...TTTCAGGCAGCATTGGAGCTCAGCACAAGCACCAAACCATACGACTGTGTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CAA 90 bp CATGCTGAGAGCAGAAGAAGTACCATCCATCGGGGAAGCGTAGAGTCTCTCCAACCCATGAATGTGGTTTaGCCGGAAACACTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: HAESRRSTIHRGSVESLQPMNVV*PETLVS
Trigger: ACTGACCAGTGTTTCCGGCAAAACCACATTCATGGG...TTGGAGAGACTCTACGCTTCCCCGATGGATGGTACTTCTTCTGCTCTCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACTATGGCTTGCTCCATTaGCATTACCTCCCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: SSCRHSMACSHLMPISTYYGLLH*HYLPVV
Trigger: GACAACTGGGAGGTAATGCAAATGGAGCAAGCCATA...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS TCA 90 bp CCTGCAGCTGCTCATAAACCACTCGGGGACACTGGTGCAGTCCACTaGACGAAGCAGCACACTGCTAATCAAATGAGGAATCTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: PAAAHKPLGDTGAVH*TKQHTANQMRNLFR
Trigger: TCTGAAAAGATTCCTCATTTGATTAGCAGTGTGCTGCTTCGTTCAGTGGACTGCACCAGTGTCCCCGAGTGGTTTATGAGCAGCTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402360.6
ENST00000403856.1
ENST00000404790.5
ENST00000405006.8
ENST00000405975.7
ENST00000474159.6
CDS GCA 90 bp AACCACGTGGAGTCGAGGAATGACAGTGGGAGAAAGTGGTTAAAGTaGTGTCTCCATGGAGACCTTAGCGACCGGAAATCAGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: NHVESRNDSGRKWLK*CLHGDLSDRKSVSQ
Trigger: CTGTGAAACTGATTTCCGGTCGCTAAGGTCTCCATGGAGACAGCACTTTAACCACTTTCTCCCACTGTCATTCCTCGACTCCACGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405006.8
CDS CCA 90 bp CGATTTCTGAACCACGTGGAGTCGAGGAATGACAGTGGGAGAAAGTaGTTAAAGTGCTGTCTCCATGGAGACCTTAGCGACCGGAAATCA +
Preference number: 5 (lower is better)
Translates to: RFLNHVESRNDSGRK*LKCCLHGDLSDRKS
Trigger: TGATTTCCGGTCGCTAAGGTCTCCATGGAGACAGCACTTTAACCACTTTCTCCCACTGTCATTCCTCGACTCCACGTGGTTCAGAAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405006.8
CDS CCA 90 bp GTAGTCATGCTTCCCTTTAGAACGCTGCTTCACTCTACACCTTCCTaGCTGACTCCCACAAACATTCTCTGGGCGATTTCTGAACCACGT +
Preference number: 5 (lower is better)
Translates to: VVMLPFRTLLHSTPS*LTPTNILWAISEPR
Trigger: ACGTGGTTCAGAAATCGCCCAGAGAATGTTTGTGGGAGTCAGCCAGGAAGGTGTAGAGTGAAGCAGCGTTCTAAAGGGAAGCATGACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405006.8
CDS-3UTR CAA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCAAGAGAACAGATCTGTaGCCGCACTCCTGGAGACTG +
Preference number: 5 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSKRTDL*PHSWRL
Trigger: CAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTT...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGAAGAGAACAGATCTGTaGCCGCACTCCTGGAGACTG +
Preference number: 5 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKKRTDL*PHSWRL
Trigger: CAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTT...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CAA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACACTGTTCTGGCAGCTTTaGCAGACTCACATTTGGGCA +
Preference number: 5 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTLFWQL*QTHIWA
Trigger: TGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACAG...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp ATCAAAAGGAGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGCTGAGCCAGAGTTTGGCTTaGGTACAAACAGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: IKRSFSTTGLHSLTNCRLSQSLA*VQTVMS
Trigger: TGACATCACTGTTTGTACCAAAGCCAAACTCTGGCT...CAGCCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCTCCTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000402796.5
CDS-3UTR CAA 90 bp AGCAGCTGCAGGCATTCCATGGCCTGTAGCCATCTCATGCCAATCTCTACCTACAGTGAGCCGGTGCATTaGGAGAAGGTTTTTGAACAT +
Preference number: 5 (lower is better)
Translates to: SSCRHSMACSHLMPISTYSEPVH*EKVFEH
Trigger: ATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACT...GTAGGTAGAGATTGGCATGAGATGGCTACAGGCCATGGAATGCCTGCAGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGACACAGTCGTATGGTTaGGTGCTTGTGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKTQSYG*VLVLSS
Trigger: GGAGCTCAGCACAAGCACCAAACCATACGACTGTGT...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CAA 90 bp CAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTCTAAAATCTGTTCCCGGGGTTTCACCATGTaGGCCAGTCTGGTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: QNQGVSRAMHSRGSKICSRGFTM*ASLVLN
Trigger: GTTTAAGACCAGACTGGCCAACATGGTGAAACCCCG...GGAACAGATTTTAGAGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACATCTCCCAGGTATCAGTaGCAGACTGAAGATGTCCAT +
Preference number: 5 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTSPRYQ*QTEDVH
Trigger: ATGGACATCTTCAGTCTGCAACTGATACCTGGGAGA...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp ACTACCCACCTAAGAAAGGCAACTTCCATCCCCTCTTGCTATTCACACCCTATCCTGTTCTGGCAGCTTTaGCAGACTCACATTTGGGCA +
Preference number: 5 (lower is better)
Translates to: TTHLRKATSIPSCYSHPILFWQL*QTHIWA
Trigger: TGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACAG...GATAGGGTGTGAATAGCAAGAGGGGATGGAAGTTGCCTTTCTTAGGTGGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CAA 90 bp ATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAAAGCCAGAGTTTGGCTTaGGTACAAACAGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: MNVVLPETLVSAAGECGQSQSLA*VQTVMS
Trigger: TGACATCACTGTTTGTACCAAAGCCAAACTCTGGCT...TTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AGCTTCTCTACCACAGGTCTCCACTCGCTCACCAACTGCAGGCTGTTTAGAGATGGTCAGCGCAGCAACTaGCATTTCTTTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SFSTTGLHSLTNCRLFRDGQRSN*HFFLLL
Trigger: AAGAAGAAGAAAGAAATGCAAGTTGCTGCGCTGACC...ATCTCTAAACAGCCTGCAGTTGGTGAGCGAGTGGAGACCTGTGGTAGAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp CTAACACATGCGCCTCTTCTGGAGCTACTCTGGTGGAACTTACAGAGGACCTACGGTCAGCGCAGCAACTaGCATTTCTTTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LTHAPLLELLWWNLQRTYGQRSN*HFFLLL
Trigger: AAGAAGAAGAAAGAAATGCAAGTTGCTGCGCTGACC...GTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CAA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTTTTCCAAGAGGTCACTaGCATAAGGTACCAATGACT +
Preference number: 5 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEAFPRGH*HKVPMT
Trigger: AGTCATTGGTACCTTATGCAAGTGACCTCTTGGAAA...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCATCTCCCAGGTATCAGTaGCAGACTGAAGATGTCCAT +
Preference number: 5 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIASPRYQ*QTEDVH
Trigger: ATGGACATCTTCAGTCTGCAACTGATACCTGGGAGA...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTAAGAGAACAGATCTGTaGCCGCACTCCTGGAGACTG +
Preference number: 5 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGKRTDL*PHSWRL
Trigger: CAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTT...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp GCTGATGAATTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGCTGTTCTGGCAGCTTTaGCAGACTCACATTTGGGCA +
Preference number: 5 (lower is better)
Translates to: ADELSLALFLHQTRGSPRLFWQL*QTHIWA
Trigger: TGCCCAAATGTGAGTCTGCAAAAGCTGCCAGAACAG...CCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAATTCATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAAGATGCCCATGAATGTGGTTTaGCCGGAAACACTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: YSCIRHEVLPGISCRLKMPMNVV*PETLVS
Trigger: ACTGACCAGTGTTTCCGGCAAAACCACATTCATGGG...CATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp CCAACAATAAGAACTTCTCTCCCATGTTGCACAGCAAGGGTGGCACGCCCTTCTGGCTATTTAGTGAGCTaGCCAATACTTTCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: PTIRTSLPCCTARVARPSGYLVS*PILSSR
Trigger: CCTTGAAGAAAGTATTGGCAAGCTCACTAAATAGCC...AGAAGGGCGTGCCACCCTTGCTGTGCAACATGGGAGAGAAGTTCTTATTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp ATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAAGGCTATTTAGTGAGCTaGCCAATACTTTCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: MNVVLPETLVSAAGECGQGYLVS*PILSSR
Trigger: CCTTGAAGAAAGTATTGGCAAGCTCACTAAATAGCC...TTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp ACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTAGGAAGTTAGGCTCGGGGAACTaGATTCAAGGACTTGTATGG +
Preference number: 5 (lower is better)
Translates to: TRMTVEHPARLRSSAGRKLGSGN*IQGLVW
Trigger: CCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAA...CTTCCTACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTACACAGTCGTATGGTTaGGTGCTTGTGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGTQSYG*VLVLSS
Trigger: GGAGCTCAGCACAAGCACCAAACCATACGACTGTGT...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCTCCAGAACTGGCTGGTaGTCCTTTGCAGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSSRTGW*SFADLL
Trigger: CAACAGATCTGCAAAGGACAACCAGCCAGTTCTGGA...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATAAGAGCATCTCAGGGCTaGGGGGACGCCAGCCGGACT +
Preference number: 5 (lower is better)
Translates to: IPLVFGNDQHQYHDSADIRASQG*GDASRT
Trigger: AGTCCGGCTGGCGTCCCCCAAGCCCTGAGATGCTCT...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp CTCGAGGCTGAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATATGCCGCTTCTGTTCTaGGAAGAGTTAACTGCCTCG +
Preference number: 5 (lower is better)
Translates to: LEAESHSESSVSGLLTLNMPLLF*EELTAS
Trigger: CGAGGCAGTTAACTCTTCCAAGAACAGAAGCGGCAT...ATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTCAGCCTCGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp CTCATAATGAAGGGAACAAAAGGTCCCATGCTGAGAGCAGAAGAAGTACCATCCACCTACGGAGGGCCTTaGCAGTTAACACTATCCTAC +
Preference number: 5 (lower is better)
Translates to: LIMKGTKGPMLRAEEVPSTYGGP*QLTLSY
Trigger: GTAGGATAGTGTTAACTGCAAAGGCCCTCCGTAGGT...GGATGGTACTTCTTCTGCTCTCAGCATGGGACCTTTTGTTCCCTTCATTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS GCA 90 bp ATGAAAAACCTTGGCACATCCATAGCCACGCCACTGGAGAAACTCTaGCTTAACCCTTCTTGGACTAGGGACCTTTCTAGCAACTTAAGA +
Preference number: 5 (lower is better)
Translates to: MKNLGTSIATPLEKL*LNPSWTRDLSSNLR
Trigger: TCTTAAGTTGCTAGAAAGGTCCCTAGTCCAAGAAGGGTTAAGGCAGAGTTTCTCCAGTGGCGTGGCTATGGATGTGCCAAGGTTTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486735.5
CDS-3UTR CAA 90 bp CTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGCCATCAAAGCTCCCAGTTTCCAAGAGGTCACTaGCATAAGGTACCAATGACT +
Preference number: 5 (lower is better)
Translates to: LKMSMSSSYSQTCHQSSQFPRGH*HKVPMT
Trigger: AGTCATTGGTACCTTATGCAAGTGACCTCTTGGAAA...CTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TGCCAACAGTGCCTGTATGTAGAAAGGAATTCCAGCACTGCGCCTTGTAGCACATTCTCTGGTTCACGTTaGGATTTACTCTGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: CQQCLYVERNSSTAPCSTFSGSR*DLLCSN
Trigger: ATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGAA...TGTGCTACAAGGCGCAGTGCTGGAATTCCTTTCTACATACAGGCACTGTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp CTGAAGATGTCCATGAGCTCTAGCTATTCGCAGACATGCCATCAAAGCTCCCAGTTTGCAGACTCACATTaGGGCACCTGTTTAGTACTT +
Preference number: 5 (lower is better)
Translates to: LKMSMSSSYSQTCHQSSQFADSH*GTCLVL
Trigger: AAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAA...CTGGGAGCTTTGATGGCATGTCTGCGAATAGCTAGAGCTCATGGACATCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AGGCAGACAAGGATGACGGTAGAGCATCCTGCCAGATTAAGAAGTTCAGCAGGTGGCTATTTAGTGAGCTaGCCAATACTTTCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: RQTRMTVEHPARLRSSAGGYLVS*PILSSR
Trigger: CCTTGAAGAAAGTATTGGCAAGCTCACTAAATAGCC...ACCTGCTGAACTTCTTAATCTGGCAGGATGCTCTACCGTCATCCTTGTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CAA 90 bp AACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTCAGTGCACAATCCACACATATTTaGCCATATGGGAGAATCGGA +
Preference number: 5 (lower is better)
Translates to: NLEKCPMNVVLPETLVSAQSTHI*PYGRIG
Trigger: TCCGATTCTCCCATATGGCAAAATATGTGTGGATTG...TGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAAGATGTGCTTGGATGACGATTaGGTTCTCCCATATCATGCC +
Preference number: 5 (lower is better)
Translates to: YSCIRHEVLPGISCRLKMCLDDD*VLPYHA
Trigger: GGCATGATATGGGAGAACCAAATCGTCATCCAAGCA...CATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp GGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGAGGCTAATATCCTCGGCTGCTaGACATATAATAAGCACGAA +
Preference number: 5 (lower is better)
Translates to: GSQKFKIKVSVGPCTPEANILGC*TYNKHE
Trigger: TTCGTGCTTATTATATGTCAAGCAGCCGAGGATATT...AGCCTCTGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp TTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTTCTCTAATCTCTGAGTaGCCACGGCACCTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: FKKRTDLLPHSWRLAVKISLISE*PRHLRV
Trigger: GACTCTTAGGTGCCGTGGCAACTCAGAGATTAGAGA...AATCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS CCA 90 bp ACATCCATAGCCACGCCACTGGAGAAACTCTGCCTTAACCCTTCTTaGACTAGGGACCTTTCTAGCAACTTAAGATTTTTCTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: TSIATPLEKLCLNPS*TRDLSSNLRFFSFH
Trigger: GTGAAAGGAGAAAAATCTTAAGTTGCTAGAAAGGTCCCTAGTCCAAGAAGGGTTAAGGCAGAGTTTCTCCAGTGGCGTGGCTATGGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486735.5
CDS-3UTR CAA 90 bp AGTGTGGATGAATTTCGCACTGCCCAGACCGGTGATGTAAAACCCAGAATTGCATTTCCAAGAGGTCACTaGCATAAGGTACCAATGACT +
Preference number: 5 (lower is better)
Translates to: SVDEFRTAQTGDVKPRIAFPRGH*HKVPMT
Trigger: AGTCATTGGTACCTTATGCAAGTGACCTCTTGGAAA...TGCAATTCTGGGTTTTACATCACCGGTCTGGGCAGTGCGAAATTCATCCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTTCTCCCAGGTATCAGTaGCAGACTGAAGATGTCCAT +
Preference number: 5 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGSPRYQ*QTEDVH
Trigger: ATGGACATCTTCAGTCTGCAACTGATACCTGGGAGA...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp GCTGAGCAGGATATTTTCCTGTTTGACCACAGTCAACGAAGACAGCACAAGCAAAGCCTTGCTTTATTCTaGCATCAGACACGAGGTTCT +
Preference number: 5 (lower is better)
Translates to: AEQDIFLFDHSQRRQHKQSLALF*HQTRGS
Trigger: AGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCT...TTGCTTGTGCTGTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCTGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp GCTGGAAGTCTGAATTCGTTCCGTGTTTGGAGTCTGAGTAGGCTTGCAACAAATAGCCTTGCTTTATTCTaGCATCAGACACGAGGTTCT +
Preference number: 5 (lower is better)
Translates to: AGSLNSFRVWSLSRLATNSLALF*HQTRGS
Trigger: AGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCT...ATTTGTTGCAAGCCTACTCAGACTCCAAACACGGAACGAATTCAGACTTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAGACTGAAGATGAGCCTTGCTTTATTCTaGCATCAGACACGAGGTTCT +
Preference number: 5 (lower is better)
Translates to: YSCIRHEVLPGISCRLKMSLALF*HQTRGS
Trigger: AGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCT...CATCTTCAGTCTGCAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CAA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCATTCTCTGGTTCACGTTaGGATTTACTCTGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPFSGSR*DLLCSN
Trigger: ATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGAA...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp AATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACACTGGTTCATCTGTAAGCGGCTaGCTGACTCTGAATCAGTGT +
Preference number: 5 (lower is better)
Translates to: NEKPGEVSHECGFAGNTGSSVSG*LTLNQC
Trigger: ACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGA...ACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGACCATTCTGCCTTTCTTaGGTTCAGATGCCAACAGTG +
Preference number: 5 (lower is better)
Translates to: FLRREQICCRTPGDWLLRPFCLS*VQMPTV
Trigger: CACTGTTGGCATCTGAACCAAAGAAAGGCAGAATGG...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AGTTCTGGAAGCCAGAAGTTCAAAATCAAGGTGTCAGTAGGGCCATGCACTCCAGGCTATTTAGTGAGCTaGCCAATACTTTCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: SSGSQKFKIKVSVGPCTPGYLVS*PILSSR
Trigger: CCTTGAAGAAAGTATTGGCAAGCTCACTAAATAGCC...TGGAGTGCATGGCCCTACTGACACCTTGATTTTGAACTTCTGGCTTCCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp AGGCTGTCCGTTAGGCTCGGGGAACTTGATTCAAGGACTTGTATGGCTGAATTACAATCCACACATATTTaGCCATATGGGAGAATCGGA +
Preference number: 5 (lower is better)
Translates to: RLSVRLGELDSRTCMAELQSTHI*PYGRIG
Trigger: TCCGATTCTCCCATATGGCAAAATATGTGTGGATTG...TAATTCAGCCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AATTCCCATTCAGGCTGTCCGTTAGGCTCGGGGAACTTGATTCAAGGACTTGTAGAACATGATTTTGGTTaGGTGTCTCAGAGCATCCAA +
Preference number: 5 (lower is better)
Translates to: NSHSGCPLGSGNLIQGLVEHDFG*VSQSIQ
Trigger: TTGGATGCTCTGAGACACCAAACCAAAATCATGTTC...TACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCTGAATGGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp CTAACACATGCGCCTCTTCTGGAGCTACTCTGGTGGAACTTACAGAGGACCTACTTTTTGAACATGATTTaGGTTTGGTGTCTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LTHAPLLELLWWNLQRTYFLNMI*VWCLRA
Trigger: TGCTCTGAGACACCAAACCAAAATCATGTTCAAAAA...GTAGGTCCTCTGTAAGTTCCACCAGAGTAGCTCCAGAAGAGGCGCATGTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CAA 90 bp AGGCTGTCCGTTAGGCTCGGGGAACTTGATTCAAGGACTTGTATGGCTGAATTAGTAAGAGAAACATGCTaGGATGACGATTTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RLSVRLGELDSRTCMAELVRETC*DDDLVL
Trigger: GAGAACCAAATCGTCATCCAAGCATGTTTCTCTTAC...TAATTCAGCCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAACGGACAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTGTAAGAGAAACATGCTaGGATGACGATTTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELVRETC*DDDLVL
Trigger: GAGAACCAAATCGTCATCCAAGCATGTTTCTCTTAC...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGTCCTTTGCAGATCTGTaGAGGCAGCAAGTCAATAGG +
Preference number: 5 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLSFADL*RQQVNR
Trigger: CCTATTGACTTGCTGCCTCAACAGATCTGCAAAGGA...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp CTGAATGACTGGAGACACCACAGTGGAAAGCCTGTAGGACATCAAAAGGAGCTTAGAAGGCAAACTCTGTaGACTGGCAGGTATTTTCTT +
Preference number: 5 (lower is better)
Translates to: LNDWRHHSGKPVGHQKELRRQTL*TGRYFL
Trigger: AAGAAAATACCTGCCAGTCAACAGAGTTTGCCTTCT...AAGCTCCTTTTGATGTCCTACAGGCTTTCCACTGTGGTGTCTCCAGTCATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCGCAATCTCAGCCCATaGAAACCTCAGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNRNLSP*KPQPPG
Trigger: CCCAGGAGGCTGAGGTTTCAATGGGCTGAGATTGCG...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS CCA 90 bp TCTTGGCCTCATGCTGGATTTCTGATGGTTGGGATAACTCGTTCCTaGGCGTTGAGTTTTTGTCATCATTCATCCAAACATATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: SWPHAGFLMVGITRS*ALSFCHHSSKHILP
Trigger: TGGGAGAATATGTTTGGATGAATGATGACAAAAACTCAACGCCCAGGAACGAGTTATCCCAACCATCAGAAATCCAGCATGAGGCCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473004.5
CDS-3UTR CAA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCAGTCTCCCAACTATACTaGAATTCCCATTCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPVSQLY*NSHSGC
Trigger: ACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGAC...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AAGCCCTTTATGACACCACTGTATGAAGCCACTAACACTCTCCAGCCTCCTAGGTTTTTGAACATGATTTaGGTTTGGTGTCTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: KPFMTPLYEATNTLQPPRFLNMI*VWCLRA
Trigger: TGCTCTGAGACACCAAACCAAAATCATGTTCAAAAA...CCTAGGAGGCTGGAGAGTGTTAGTGGCTTCATACAGTGGTGTCATAAAGGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp ATCTATAGCCAAAATATGTTCAACTCCTATGCACTCTACCAAACAACCAAGGCAACACAGTCGTATGGTTaGGTGCTTGTGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: IYSQNMFNSYALYQTTKATQSYG*VLVLSS
Trigger: GGAGCTCAGCACAAGCACCAAACCATACGACTGTGT...TGCCTTGGTTGTTTGGTAGAGTGCATAGGAGTTGAACATATTTTGGCTATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGTGCTTGGATGACGATTaGGTTCTCCCATATCACTGT +
Preference number: 5 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLCLDDD*VLPYHC
Trigger: ACAGTGATATGGGAGAACCAAATCGTCATCCAAGCA...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CAA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATCATGGATTTTGCCTCTaGGCCAGCCAGAGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYHGFCL*ASQSLA
Trigger: AGCCAAACTCTGGCTGGCCAAGAGGCAAAATCCATG...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGTTGTCCAGGCTGTTCTaGAACTCCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: NIRNNIFSQARISEQCSKLSRLF*NSWAQA
Trigger: TGCTTGAGCCCAGGAGTTCAAGAACAGCCTGGACAA...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CAA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATTCTCTGGTTCACGTTaGGATTTACTCTGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: FLRREQICCRTPGDWLLRFSGSR*DLLCSN
Trigger: ATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGAA...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CAA 90 bp GAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTTGCAGACTCACATTaGGGCACCTGTTTAGTACTT +
Preference number: 5 (lower is better)
Translates to: ESHSESSVSGLLTLNQCPFADSH*GTCLVL
Trigger: AAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAA...TGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TTAAGCCTTGCTTTATTCTTGCATCAGACACGAGGTTCTCCCAGGTATCAGTTGCAATCCACACATATTTaGCCATATGGGAGAATCGGA +
Preference number: 5 (lower is better)
Translates to: LSLALFLHQTRGSPRYQLQSTHI*PYGRIG
Trigger: TCCGATTCTCCCATATGGCAAAATATGTGTGGATTG...CAACTGATACCTGGGAGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CAA 90 bp ATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTGTCTCCCAACTATACTaGAATTCCCATTCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: ISFRIICKRLADSESVSIVSQLY*NSHSGC
Trigger: ACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGAC...AATGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp ATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATCAGTGTCCATTAGTGAGCCGGTGCATTaGGAGAAGGTTTTTGAACAT +
Preference number: 5 (lower is better)
Translates to: ISFRIICKRLADSESVSISEPVH*EKVFEH
Trigger: ATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACT...AATGGACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS TCA 90 bp GAGTTTAGAACTCTTAGGCTGAGGTTTAGAATGAAATACAGGACCTaGGACCTGAGGGCAGGATTGTGTGCAAGTTCATTACATAATGAC +
Preference number: 5 (lower is better)
Translates to: EFRTLRLRFRMKYRT*DLRAGLCASSLHND
Trigger: GTCATTATGTAATGAACTTGCACACAATCCTGCCCTCAGGTCTCAGGTCCTGTATTTCATTCTAAACCTCAGCCTAAGAGTTCTAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS CCA 90 bp GAAAAACCTCATGCTGGATTTCTGATGGTTGGGATAACTCGTTCCTaGGCGTTGAGTTTTTGTCATCATTCATCCAAACATATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: EKPHAGFLMVGITRS*ALSFCHHSSKHILP
Trigger: TGGGAGAATATGTTTGGATGAATGATGACAAAAACTCAACGCCCAGGAACGAGTTATCCCAACCATCAGAAATCCAGCATGAGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497770.1
CDS-3UTR CAA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTAGCCTTGCTTTATTCTaGCATCAGACACGAGGTTCT +
Preference number: 5 (lower is better)
Translates to: TVLCMSSVGPAKEINSFISLALF*HQTRGS
Trigger: AGAACCTCGTGTCTGATGCAAGAATAAAGCAAGGCT...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCTTCTCTGGTTCACGTTaGGATTTACTCTGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFFSGSR*DLLCSN
Trigger: ATTGGAGCAGAGTAAATCCAAACGTGAACCAGAGAA...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp ATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATTCATCTGTAAGCGGCTaGCTGACTCTGAATCAGTGT +
Preference number: 5 (lower is better)
Translates to: IRNNIFSQARISEQCSKDSSVSG*LTLNQC
Trigger: ACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGA...ATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGTCATCTGTAAGCGGCTaGCTGACTCTGAATCAGTGT +
Preference number: 5 (lower is better)
Translates to: NIRNNIFSQARISEQCSKSSVSG*LTLNQC
Trigger: ACACTGATTCAGAGTCAGCAAGCCGCTTACAGATGA...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp CTCGAGGCTGAATCTCATTCAGAATCATCTGTAAGCGGCTTGCTGACTCTGAATTCCCTGTCATTCTATTaGTTTTGGAATGTTCATCCT +
Preference number: 5 (lower is better)
Translates to: LEAESHSESSVSGLLTLNSLSFY*FWNVHP
Trigger: AGGATGAACATTCCAAAACAAATAGAATGACAGGGA...ATTCAGAGTCAGCAAGCCGCTTACAGATGATTCTGAATGAGATTCAGCCTCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCCCCATGAATGTGGTTTaGCCGGAAACACTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: KREKNSLPVILFVLECSSPMNVV*PETLVS
Trigger: ACTGACCAGTGTTTCCGGCAAAACCACATTCATGGG...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCGGTCAGCGCAGCAACTaGCATTTCTTTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SQLSNIITMALSHCPITCGQRSN*HFFLLL
Trigger: AAGAAGAAGAAAGAAATGCAAGTTGCTGCGCTGACC...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTAGTGAGCCGGTGCATTaGGAGAAGGTTTTTGAACAT +
Preference number: 5 (lower is better)
Translates to: TVLCMSSVGPAKEINSFISEPVH*EKVFEH
Trigger: ATGTTCAAAAACCTTCTCCAAATGCACCGGCTCACT...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp CCACTGCATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGACCCCTGATAACTCCTaGCTCATGTGGGATTTTAAC +
Preference number: 5 (lower is better)
Translates to: PLHFFHGNNFCAPITFTKTPDNS*LMWDFN
Trigger: GTTAAAATCCCACATGAGCAAGGAGTTATCAGGGGT...CTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATGCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS CCA 90 bp ATTGGCTACAGTTTCCAACTGTTTGAGAAGAAAAGGATAGAGTTCTaGGAAACGAGAGAAAAACTCTCTCCCTGTCATTCACTTCCATTC +
Preference number: 5 (lower is better)
Translates to: IGYSFQLFEKKRIEF*ETREKLSPCHSLPF
Trigger: GAATGGAAGTGAATGACAGGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAGTTGGAAACTGTAGCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485353.5
CDS-3UTR CAA 90 bp ACTGTACTCTGTATGTCATCTGTAGGCCCAGCCAAAGAGATTAACTCTTTCATTTTTCCAAGAGGTCACTaGCATAAGGTACCAATGACT +
Preference number: 5 (lower is better)
Translates to: TVLCMSSVGPAKEINSFIFPRGH*HKVPMT
Trigger: AGTCATTGGTACCTTATGCAAGTGACCTCTTGGAAA...AATGAAAGAGTTAATCTCTTTGGCTGGGCCTACAGATGACATACAGAGTACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp CACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATCAAATCATCAGGAAATCTCCCAGGTATCAGTaGCAGACTGAAGATGTCCAT +
Preference number: 5 (lower is better)
Translates to: HLCNIPAKMYSMNQIIRKSPRYQ*QTEDVH
Trigger: ATGGACATCTTCAGTCTGCAACTGATACCTGGGAGA...TTTCCTGATGATTTGATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp AAACGAGAGAAAAACTCTCTCCCTGTCATTCTATTTGTTTTGGAATGTTCATCCCCATTCTGCCTTTCTTaGGTTCAGATGCCAACAGTG +
Preference number: 5 (lower is better)
Translates to: KREKNSLPVILFVLECSSPFCLS*VQMPTV
Trigger: CACTGTTGGCATCTGAACCAAAGAAAGGCAGAATGG...GGATGAACATTCCAAAACAAATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp TTTTTAAGAAGAGAACAGATCTGTTGCCGCACTCCTGGAGACTGGCTGTTAAGATCCCTGTCATTCTATTaGTTTTGGAATGTTCATCCT +
Preference number: 5 (lower is better)
Translates to: FLRREQICCRTPGDWLLRSLSFY*FWNVHP
Trigger: AGGATGAACATTCCAAAACAAATAGAATGACAGGGA...TCTTAACAGCCAGTCTCCAGGAGTGCGGCAACAGATCTGTTCTCTTCTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CAA 90 bp AACATAAGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGCACCTGTCTACTGTATaGGCTACAGTTTCCAACTGT +
Preference number: 5 (lower is better)
Translates to: NIRNNIFSQARISEQCSKHLSTV*ATVSNC
Trigger: ACAGTTGGAAACTGTAGCCAATACAGTAGACAGGTG...CTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402796.5
CDS-3UTR CAA 90 bp CCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTAATGTATGGTCAGCGCAGCAACTaGCATTTCTTTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: PWKQFLCSDYFHKASLMYGQRSN*HFFLLL
Trigger: AAGAAGAAGAAAGAAATGCAAGTTGCTGCGCTGACC...ATACATTAGGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CAA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCCAATCCACACATATTTaGCCATATGGGAGAATCGGA +
Preference number: 5 (lower is better)
Translates to: SQLSNIITMALSHCPITCQSTHI*PYGRIG
Trigger: TCCGATTCTCCCATATGGCAAAATATGTGTGGATTG...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAATTAGGCTCGGGGAACTaGATTCAAGGACTTGTATGG +
Preference number: 5 (lower is better)
Translates to: SFISHTLRCSYNCFKCAELGSGN*IQGLVW
Trigger: CCATACAAGTCCTTGAATCAAGTTCCCCGAGCCTAA...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCAAAGGAAGAAGCACCTaGTTTGGGACTGTGAATATC +
Preference number: 5 (lower is better)
Translates to: SQLSNIITMALSHCPITCKGRST*FGTVNI
Trigger: GATATTCACAGTCCCAAACAAGGTGCTTCTTCCTTT...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTAACTTCCATCCCCTCTaGCTATTCACACCCTATCTG +
Preference number: 5 (lower is better)
Translates to: CKTQNCSLSSISNIRNNINFHPL*LFTPYL
Trigger: CAGATAGGGTGTGAATAGCAAGAGGGGATGGAAGTT...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CAA 90 bp CATTTCTTCCATGGAAACAATTTCTGTGCTCCGATTACTTTCACAAAGCAAGCCTGGGAAAGATTGCTCTaGTCCAGTTTTAGCATCAAT +
Preference number: 5 (lower is better)
Translates to: HFFHGNNFCAPITFTKQAWERLL*SSFSIN
Trigger: ATTGATGCTAAAACTGGACAAGAGCAATCTTTCCCA...GGCTTGCTTTGTGAAAGTAATCGGAGCACAGAAATTGTTTCCATGGAAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp ATTCCATTAGTGTTTGGAAACGACCAACATCAATATCATGACTCAGCTGATATATCTCCCAGGTATCAGTaGCAGACTGAAGATGTCCAT +
Preference number: 5 (lower is better)
Translates to: IPLVFGNDQHQYHDSADISPRYQ*QTEDVH
Trigger: ATGGACATCTTCAGTCTGCAACTGATACCTGGGAGA...TATATCAGCTGAGTCATGATATTGATGTTGGTCGTTTCCAAACACTAATGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000408045.7
ENST00000474159.6
CDS-3UTR CAA 90 bp AGTTTTATTTCCCACACACTTAGATGCAGCTACAACTGCTTTAAATGTGCAGAAGTCTCCCAACTATACTaGAATTCCCATTCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: SFISHTLRCSYNCFKCAEVSQLY*NSHSGC
Trigger: ACAGCCTGAATGGGAATTCAAGTATAGTTGGGAGAC...TTCTGCACATTTAAAGCAGTTGTAGCTGCATCTAAGTGTGTGGGAAATAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp CAACAAATGAAAAACCTGGAGAAGTGTCCCATGAATGTGGTTTTGCCGGAAACATTTTTGAACATGATTTaGGTTTGGTGTCTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: QQMKNLEKCPMNVVLPETFLNMI*VWCLRA
Trigger: TGCTCTGAGACACCAAACCAAAATCATGTTCAAAAA...TGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGGTTTTTCATTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp AGGAATAATATTTTCTCCCAGGCGCGTATCTCTGAACAATGCTCTAAGGATATTTCACTGTCTACTGTATaGGCTACAGTTTCCAACTGT +
Preference number: 5 (lower is better)
Translates to: RNNIFSQARISEQCSKDISLSTV*ATVSNC
Trigger: ACAGTTGGAAACTGTAGCCAATACAGTAGACAGTGA...AATATCCTTAGAGCATTGTTCAGAGATACGCGCCTGGGAGAAAATATTATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CAA 90 bp ATTAGGAATGTGATCTATCATAACAAATGGGACCAAGGCACGAGCTGCCATTTCATTTCAGATCTTTCATaGGAAGCAATATCCATCGTC +
Preference number: 5 (lower is better)
Translates to: IRNVIYHNKWDQGTSCHFISDLS*EAISIV
Trigger: GACGATGGATATTGCTTCCAATGAAAGATCTGAAAT...GAAATGGCAGCTCGTGCCTTGGTCCCATTTGTTATGATAGATCACATTCCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCAAGACAGAAGAGGTGCTaGCAGAGGTATTTCACAAAG +
Preference number: 5 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPRQKRC*QRYFTK
Trigger: CTTTGTGAAATACCTCTGCAAGCACCTCTTCTGTCT...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398653.5
CDS-3UTR CAA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCAATTTTAACATACCTCTaGGCCAGCCAGAGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPILTYL*ASQSLA
Trigger: AGCCAAACTCTGGCTGGCCAAGAGGTATGTTAAAAT...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408045.7
CDS-3UTR CAA 90 bp ACAACATGCCTAAAAGTAAAGCAACTTCCTTCATACTTCTCCAACAACATACCATTTGCAGACTCACATTaGGGCACCTGTTTAGTACTT +
Preference number: 5 (lower is better)
Translates to: TTCLKVKQLPSYFSNNIPFADSH*GTCLVL
Trigger: AAGTACTAAACAGGTGCCCAAATGTGAGTCTGCAAA...TGGTATGTTGTTGGAGAAGTATGAAGGAAGTTGCTTTACTTTTAGGCATGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398653.5
ENST00000402796.5
ENST00000408045.7
CDS-3UTR CAA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATGAACATGATTTTGGTTaGGTGTCTCAGAGCATCCAA +
Preference number: 5 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNEHDFG*VSQSIQ
Trigger: TTGGATGCTCTGAGACACCAAACCAAAATCATGTTC...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp TGTAAAACCCAGAATTGCAGCCTTAGCTCCATCAGCAACATAAGGAATAATATTGAACATGATTTTGGTTaGGTGTCTCAGAGCATCCAA +
Preference number: 5 (lower is better)
Translates to: CKTQNCSLSSISNIRNNIEHDFG*VSQSIQ
Trigger: TTGGATGCTCTGAGACACCAAACCAAAATCATGTTC...AATATTATTCCTTATGTTGCTGATGGAGCTAAGGCTGCAATTCTGGGTTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398653.5
ENST00000408045.7
CDS-3UTR CAA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATAGGATATTTTCCTGTTaGACCACAGTCAACGAAGAC +
Preference number: 5 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNRIFSC*TTVNED
Trigger: GTCTTCGTTGACTGTGGTCAAACAGGAAAATATCCT...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp TCCCAGTTGTCTAACATAATTACGATGGCATTAAGTCACTGCCCAATTACATGCTTCTCTTCTAATTGCTaGAGGTGGAAAGTTAACTTG +
Preference number: 5 (lower is better)
Translates to: SQLSNIITMALSHCPITCFSSNC*RWKVNL
Trigger: CAAGTTAACTTTCCACCTCAAGCAATTAGAAGAGAA...GCATGTAATTGGGCAGTGACTTAATGCCATCGTAATTATGTTAGACAACTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS GCA 90 bp AGTTTTTGTCATCATTCATCCAAACATATTCTCCCATCTTTGGGCTaGCTGTTGTCACCTCCTCACAATATAAACTTCTTTCTTAGTAGT +
Preference number: 5 (lower is better)
Translates to: SFCHHSSKHILPSLG*LLSPPHNINFFLSS
Trigger: ACTACTAAGAAAGAAGTTTATATTGTGAGGAGGTGACAACAGGCAGCCCAAAGATGGGAGAATATGTTTGGATGAATGATGACAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473004.5
ENST00000497770.1
CDS-3UTR CAA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATTGCATTACCTCCCAGTaGTCTAACATAATTACGATG +
Preference number: 5 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNCITSQ*SNIITM
Trigger: CATCGTAATTATGTTAGACAACTGGGAGGTAATGCA...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS-3UTR CAA 90 bp GAAGAACACCATTATCACCTATGCAACATTCCTGCAAAAATGTACAGCATGAATAAAGGCAGAAACCATTaGACTAATCTCAAATCAGTC +
Preference number: 5 (lower is better)
Translates to: EEHHYHLCNIPAKMYSMNKGRNH*TNLKSV
Trigger: GACTGATTTGAGATTAGTCAAATGGTTTCTGCCTTT...ATTCATGCTGTACATTTTTGCAGGAATGTTGCATAGGTGATAATGGTGTTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403856.1
CDS GCA 90 bp TCAGCTAAACAATTTTTAAACATCAGTGGCAAATGTCTAAGAACGTaGATACAACAAACTAACTGGGAAAAGACTAATCTGAACACACGA +
Preference number: 5 (lower is better)
Translates to: SAKQFLNISGKCLRT*IQQTNWEKTNLNTR
Trigger: TCGTGTGTTCAGATTAGTCTTTTCCCAGTTAGTTTGTTGTATGCACGTTCTTAGACATTTGCCACTGATGTTTAAAAATTGTTTAGCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497770.1
CDS CCA 90 bp AACATCAGTGGCAAATGTCTAAGAACGTGCATACAACAAACTAACTaGGAAAAGACTAATCTGAACACACGAGAAATCTATTCAAACAAA +
Preference number: 5 (lower is better)
Translates to: NISGKCLRTCIQQTN*EKTNLNTREIYSNK
Trigger: TTTGTTTGAATAGATTTCTCGTGTGTTCAGATTAGTCTTTTCCCAGTTAGTTTGTTGTATGCACGTTCTTAGACATTTGCCACTGATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497770.1
CDS CCA 72 bp CGTGCACGTCGGCGTCTGAGAAGAGTCGCAGGCGCCTaGTCCAGTCCCGGAAGCAGGTCTCCTTCTACGGCG +
Preference number: 6 (lower is better)
Translates to: RARRRLRRVAGA*SSPGSRSPSTA
Trigger: CGCCGTAGAAGGAGACCTGCTTCCGGGACTGGACCAGGCGCCTGCGACTCTTCTCAGACGCCGACGTGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398653.5
ENST00000403856.1
ENST00000404790.5
ENST00000405975.7
ENST00000408045.7
CDS CAA 90 bp GCATCCACCTGGCAGAAGGCAAACTCTGCAGAAGGAGATCGGGCCTaGGCACTGAGCCATCCCACAAGCAAGTGCCCCTGCCTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: ASTWQKANSAEGDRA*ALSHPTSKCPCLAQ
Trigger: CTGAGCAAGGCAGGGGCACTTGCTTGTGGGATGGCTCAGTGCCAAGGCCCGATCTCCTTCTGCAGAGTTTGCCTTCTGCCAGGTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467668.1
CDS TCA 72 bp AGGCAAACTCTGCAGAAGGAGATCGGGCCTTGGCACTaGGCCATCCCACAAGCAAGTGCCCCTGCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: RQTLQKEIGPWH*AIPQASAPALL
Trigger: GAGCAAGGCAGGGGCACTTGCTTGTGGGATGGCTCAGTGCCAAGGCCCGATCTCCTTCTGCAGAGTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467668.1
CDS CCA 72 bp AGCCGCCGAATCCTGGCGATACCAAAGGATGGGAATTaGTGTGGCTCGCCAGGCAGCCCTAGCAAAACTGGC +
Preference number: 6 (lower is better)
Translates to: SRRILAIPKDGN*CGSPGSPSKTG
Trigger: GCCAGTTTTGCTAGGGCTGCCTGGCGAGCCACACCAATTCCCATCCTTTGGTATCGCCAGGATTCGGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405006.8
CDS CAA 72 bp TGGCAGAAGGCAAACTCTGCAGAAGGAGATCGGGCCTaGGCACTGAGCCATCCCACAAGCAAGTGCCCCTGC +
Preference number: 6 (lower is better)
Translates to: WQKANSAEGDRA*ALSHPTSKCPC
Trigger: GCAGGGGCACTTGCTTGTGGGATGGCTCAGTGCCAAGGCCCGATCTCCTTCTGCAGAGTTTGCCTTCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467668.1
CDS CAA 72 bp TGTGGTCAGCTGGAGAAGTGTCCCATGAATGTGGTTTaGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGT +
Preference number: 6 (lower is better)
Translates to: CGQLEKCPMNVV*PETLVSAAGEC
Trigger: ACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGCTGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473004.5
CDS CAA 90 bp CAAAGACTGTGTGGTCAGCTGGAGAAGTGTCCCATGAATGTGGTTTaGCCGGAAACACTGGTCAGTGCAGCTGGGGAGTGTGGACAACAG +
Preference number: 6 (lower is better)
Translates to: QRLCGQLEKCPMNVV*PETLVSAAGECGQQ
Trigger: CTGTTGTCCACACTCCCCAGCTGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGCTGACCACACAGTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473004.5
CDS TCA 72 bp CTGGCTGACTCCCACAAACATTCTCTGGGCGATTTCTaGACCACGTGGAGTCGAGGAATGACAGTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: LADSHKHSLGDF*TTWSRGMTVGE
Trigger: TTCTCCCACTGTCATTCCTCGACTCCACGTGGTTCAGAAATCGCCCAGAGAATGTTTGTGGGAGTCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405006.8
CDS GCA 72 bp CTTGGCACATCCATAGCCACGCCACTGGAGAAACTCTaGCTTAACCCTTCTTGGACTAGGGACCTTTCTAGC +
Preference number: 6 (lower is better)
Translates to: LGTSIATPLEKL*LNPSWTRDLSS
Trigger: GCTAGAAAGGTCCCTAGTCCAAGAAGGGTTAAGGCAGAGTTTCTCCAGTGGCGTGGCTATGGATGTGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486735.5
CDS CAA 90 bp ACCTTTCATTGGAAGCAATATCCATCGTCCAGATCAAGAACTCCTTaGGGGTCAGATGGACACAGTGCTCCGTCTGGGGAAGCCACTCAC +
Preference number: 6 (lower is better)
Translates to: TFHWKQYPSSRSRTP*GSDGHSAPSGEATH
Trigger: GTGAGTGGCTTCCCCAGACGGAGCACTGTGTCCATCTGACCCCAAAGGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS TCA 72 bp TCCAAAGACTGTGTGGTCAGCTGGAGAAGTGTCCCATaGATGTGGTTTTGCCGGAAACACTGGTCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: SKDCVVSWRSVP*MWFCRKHWSVQ
Trigger: CTGCACTGACCAGTGTTTCCGGCAAAACCACATTCATGGGACACTTCTCCAGCTGACCACACAGTCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473004.5
CDS TCA 72 bp GCTCATAAACCACTCGGGGACACTGGTGCAGTCCACTaGACGAAGCAGCACACTGCTAATCAAATGAGGAAT +
Preference number: 6 (lower is better)
Translates to: AHKPLGDTGAVH*TKQHTANQMRN
Trigger: ATTCCTCATTTGATTAGCAGTGTGCTGCTTCGTTCAGTGGACTGCACCAGTGTCCCCGAGTGGTTTATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402360.6
ENST00000403856.1
ENST00000404790.5
ENST00000405006.8
ENST00000405975.7
ENST00000474159.6
CDS TCA 72 bp CCTTTAGAACGCTGCTTCACTCTACACCTTCCTGGCTaGCTCCCACAAACATTCTCTGGGCGATTTCTGAAC +
Preference number: 6 (lower is better)
Translates to: PLERCFTLHLPG*LPQTFSGRFLN
Trigger: GTTCAGAAATCGCCCAGAGAATGTTTGTGGGAGTCAGCCAGGAAGGTGTAGAGTGAAGCAGCGTTCTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405006.8
CDS CCA 72 bp CTTCCCTTTAGAACGCTGCTTCACTCTACACCTTCCTaGCTGACTCCCACAAACATTCTCTGGGCGATTTCT +
Preference number: 6 (lower is better)
Translates to: LPFRTLLHSTPS*LTPTNILWAIS
Trigger: AGAAATCGCCCAGAGAATGTTTGTGGGAGTCAGCCAGGAAGGTGTAGAGTGAAGCAGCGTTCTAAAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405006.8
CDS CCA 72 bp TGGAGTCTGAGTAGGCTTGCAACAAATGAAAAACCTTaGCACATCCATAGCCACGCCACTGGAGAAACTCTG +
Preference number: 6 (lower is better)
Translates to: WSLSRLATNEKP*HIHSHATGETL
Trigger: CAGAGTTTCTCCAGTGGCGTGGCTATGGATGTGCCAAGGTTTTTCATTTGTTGCAAGCCTACTCAGACTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486735.5
CDS CAA 90 bp ATGACTGATGGGACCATACATCTTACCAAGGTTGCACAGGAGGTTTaGGGGGCAAACCTTTCATTGGAAGCAATATCCATCGTCCAGATC +
Preference number: 6 (lower is better)
Translates to: MTDGTIHLTKVAQEV*GANLSLEAISIVQI
Trigger: GATCTGGACGATGGATATTGCTTCCAATGAAAGGTTTGCCCCCAAAACCTCCTGTGCAACCTTGGTAAGATGTATGGTCCCATCAGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS CAA 72 bp AAGGTTGCACAGGAGGTTTTGGGGGCAAACCTTTCATaGGAAGCAATATCCATCGTCCAGATCAAGAACTCC +
Preference number: 6 (lower is better)
Translates to: KVAQEVLGANLS*EAISIVQIKNS
Trigger: GGAGTTCTTGATCTGGACGATGGATATTGCTTCCAATGAAAGGTTTGCCCCCAAAACCTCCTGTGCAACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS CAA 72 bp GGGACCATACATCTTACCAAGGTTGCACAGGAGGTTTaGGGGGCAAACCTTTCATTGGAAGCAATATCCATC +
Preference number: 6 (lower is better)
Translates to: GTIHLTKVAQEV*GANLSLEAISI
Trigger: GATGGATATTGCTTCCAATGAAAGGTTTGCCCCCAAAACCTCCTGTGCAACCTTGGTAAGATGTATGGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS TCA 72 bp AGGGCAGGATTGTGTGCAAGTTCATTACATAATGACTaGTGGGACCATACATCTTACCAAGGTTGCACAGGA +
Preference number: 6 (lower is better)
Translates to: RAGLCASSLHND*WDHTSYQGCTG
Trigger: TCCTGTGCAACCTTGGTAAGATGTATGGTCCCATCAGTCATTATGTAATGAACTTGCACACAATCCTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS TCA 72 bp ACTCTTAGGCTGAGGTTTAGAATGAAATACAGGACCTaGGACCTGAGGGCAGGATTGTGTGCAAGTTCATTA +
Preference number: 6 (lower is better)
Translates to: TLRLRFRMKYRT*DLRAGLCASSL
Trigger: TAATGAACTTGCACACAATCCTGCCCTCAGGTCTCAGGTCCTGTATTTCATTCTAAACCTCAGCCTAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS TCA 72 bp CTGAGGTTTAAGGGAAAATCTCTTGCTTCTCTGGGGTaGACACCACAACATCTGTTCTTTGGTCATAACAGC +
Preference number: 6 (lower is better)
Translates to: LRFKGKSLASLG*TPQHLFFGHNS
Trigger: GCTGTTATGACCAAAGAACAGATGTTGTGGTGTTCACCCCAGAGAAGCAAGAGATTTTCCCTTAAACCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485353.5
CDS CAA 90 bp CCTCATGCTGGATTTCTGATGGTTGGGATAACTCGTTCCTGGGCGTaGAGTTTTTGTCATCATTCATCCAAACATATTCTCCCATCTTTG +
Preference number: 6 (lower is better)
Translates to: PHAGFLMVGITRSWA*SFCHHSSKHILPSL
Trigger: CAAAGATGGGAGAATATGTTTGGATGAATGATGACAAAAACTCAACGCCCAGGAACGAGTTATCCCAACCATCAGAAATCCAGCATGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473004.5
ENST00000497770.1
CDS CCA 72 bp CATGCTGGATTTCTGATGGTTGGGATAACTCGTTCCTaGGCGTTGAGTTTTTGTCATCATTCATCCAAACAT +
Preference number: 6 (lower is better)
Translates to: HAGFLMVGITRS*ALSFCHHSSKH
Trigger: ATGTTTGGATGAATGATGACAAAAACTCAACGCCCAGGAACGAGTTATCCCAACCATCAGAAATCCAGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473004.5
ENST00000497770.1
CDS CAA 72 bp GGATTTCTGATGGTTGGGATAACTCGTTCCTGGGCGTaGAGTTTTTGTCATCATTCATCCAAACATATTCTC +
Preference number: 6 (lower is better)
Translates to: GFLMVGITRSWA*SFCHHSSKHIL
Trigger: GAGAATATGTTTGGATGAATGATGACAAAAACTCAACGCCCAGGAACGAGTTATCCCAACCATCAGAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473004.5
ENST00000497770.1
CDS CAA 90 bp TGTCATCATTCATCCAAACATATTCTCCCATCTTTGGGCTGCCTGTaGTCACCTCCTCACAATATAAACTTCTTTCTTAGTAGTCTCCAA +
Preference number: 6 (lower is better)
Translates to: CHHSSKHILPSLGCL*SPPHNINFFLSSLQ
Trigger: TTGGAGACTACTAAGAAAGAAGTTTATATTGTGAGGAGGTGACAACAGGCAGCCCAAAGATGGGAGAATATGTTTGGATGAATGATGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473004.5
ENST00000497770.1
CDS CCA 72 bp AGTTTCCAACTGTTTGAGAAGAAAAGGATAGAGTTCTaGGAAACGAGAGAAAAACTCTCTCCCTGTCATTCA +
Preference number: 6 (lower is better)
Translates to: SFQLFEKKRIEF*ETREKLSPCHS
Trigger: TGAATGACAGGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCTTTTCTTCTCAAACAGTTGGAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485353.5
CDS CAA 72 bp TCATCCAAACATATTCTCCCATCTTTGGGCTGCCTGTaGTCACCTCCTCACAATATAAACTTCTTTCTTAGT +
Preference number: 6 (lower is better)
Translates to: SSKHILPSLGCL*SPPHNINFFLS
Trigger: ACTAAGAAAGAAGTTTATATTGTGAGGAGGTGACAACAGGCAGCCCAAAGATGGGAGAATATGTTTGGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473004.5
ENST00000497770.1
CDS CCA 72 bp TTGAATATAACTCTAGATCCTCAAGAGAAAGACCACTaGGCCAAACTGGATCCTATTTGTTTTGGAATGTTC +
Preference number: 6 (lower is better)
Translates to: LNITLDPQEKDH*AKLDPICFGMF
Trigger: GAACATTCCAAAACAAATAGGATCCAGTTTGGCCCAGTGGTCTTTCTCTTGAGGATCTAGAGTTATATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436947.1
CDS GCA 72 bp ACTTTGAATAGTGGGATCACACATGCCATTTTTATCTaGTTTCTCCAGCAGAGGCACAATCTGTTTAATATA +
Preference number: 6 (lower is better)
Translates to: TLNSGITHAIFI*FLQQRHNLFNI
Trigger: TATATTAAACAGATTGTGCCTCTGCTGGAGAAAGCAGATAAAAATGGCATGTGTGATCCCACTATTCAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000398653.5
ENST00000402360.6
ENST00000403856.1
ENST00000404790.5
ENST00000405006.8
ENST00000405975.7
ENST00000408045.7
ENST00000474159.6
CDS CCA 72 bp GGCAAATGTCTAAGAACGTGCATACAACAAACTAACTaGGAAAAGACTAATCTGAACACACGAGAAATCTAT +
Preference number: 6 (lower is better)
Translates to: GKCLRTCIQQTN*EKTNLNTREIY
Trigger: ATAGATTTCTCGTGTGTTCAGATTAGTCTTTTCCCAGTTAGTTTGTTGTATGCACGTTCTTAGACATTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497770.1
CDS CAA 72 bp AACCTTGGTAAAAATACTCAGCAATCCACACATATTTaGCCATATGGGAGAATCGGAAGTCTTCCAAAGATT +
Preference number: 6 (lower is better)
Translates to: NLGKNTQQSTHI*PYGRIGSLPKI
Trigger: AATCTTTGGAAGACTTCCGATTCTCCCATATGGCAAAATATGTGTGGATTGCTGAGTATTTTTACCAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000398653.5
ENST00000402360.6
ENST00000403856.1
ENST00000404790.5
ENST00000405006.8
ENST00000405975.7
ENST00000408045.7
ENST00000474159.6
CDS CCA 72 bp CTGGTTACAAAAATGCCTCCGGAAGCAATTACCTTTTaGTTATTAATGCAAATCACTGACATCATTCTATTG +
Preference number: 6 (lower is better)
Translates to: LVTKMPPEAITF*LLMQITDIILL
Trigger: CAATAGAATGATGTCAGTGATTTGCATTAATAACCAAAAGGTAATTGCTTCCGGAGGCATTTTTGTAACCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS CAA 72 bp CAAAATTACAATCAGACATATTTCATACACCGGTTTTaGCAGATAGTCTGTAATCCATGCAGAGGTGAATAC +
Preference number: 6 (lower is better)
Translates to: QNYNQTYFIHRF*QIVCNPCRGEY
Trigger: GTATTCACCTCTGCATGGATTACAGACTATCTGCAAAAACCGGTGTATGAAATATGTCTGATTGTAATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485018.1
CDS GCA 72 bp CAATTTTTAAACATCAGTGGCAAATGTCTAAGAACGTaGATACAACAAACTAACTGGGAAAAGACTAATCTG +
Preference number: 6 (lower is better)
Translates to: QFLNISGKCLRT*IQQTNWEKTNL
Trigger: CAGATTAGTCTTTTCCCAGTTAGTTTGTTGTATGCACGTTCTTAGACATTTGCCACTGATGTTTAAAAATTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497770.1