RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TH (Homo sapiens)

Ensembl gene IDs: ENSG00000180176

Ensembl transcript IDs: ENST00000324155.8, ENST00000333684.9, ENST00000352909.8, ENST00000381168.7, ENST00000381175.5, ENST00000381178.5, ENST00000412076.1, ENST00000416223.5, ENST00000461172.1, ENST00000469226.1, ENST00000479437.5

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATaGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCGGCTCAGGGG +
Preference number: 1 (lower is better)
Translates to: GQCPARTARRCGRPA*ARAPAARGSSPAQG
Trigger: CCCCTGAGCCGGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
3UTR CCA 90 bp GCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCGTaGCGTAGAGGCCCTTCAGCGTGGTGTAGACCTCCTTCCAGGTGG +
Preference number: 1 (lower is better)
Translates to: APAKQRPPGAPRRRA*RRGPSAWCRPPSRW
Trigger: CCACCTGGAAGGAGGTCTACACCACGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR GCA 90 bp GGTCGCCGTGCCTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGT +
Preference number: 1 (lower is better)
Translates to: GRRACTGRRSQQSAS*AGGTPGPRSPGGPS
Trigger: ACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCACGGCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324155.8
3UTR CCA 90 bp CCGTGCCTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGTCCAGG +
Preference number: 1 (lower is better)
Translates to: PCLYWKAISAISFLR*RYTWSEKPGWSKSR
Trigger: CCTGGACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324155.8
3UTR CCA 90 bp CCCTGCCTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGTCCAGG +
Preference number: 1 (lower is better)
Translates to: PCLYWKAISAISFLR*RYTWSEKPGWSKSR
Trigger: CCTGGACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381168.7
3UTR GCA 90 bp CAGGTCCCTGCCTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGT +
Preference number: 1 (lower is better)
Translates to: QVPACTGRRSQQSAS*AGGTPGPRSPGGPS
Trigger: ACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCAGGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381168.7
3UTR-3UTR TCA 90 bp CAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCGTGGCGTAGAGGCCCTTCAGCGCCTGGCGCACACCACTaGGCAGGGCGGCCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: QRPPGAPRRRAWRRGPSAPGAHH*AGRPGP
Trigger: GGGACCTGGCCGCCCTGCTCAGTGGTGTGCGCCAGG...CGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp CGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCACCCCGCAGGCGTGCGTaGCGTAGAGGCCCTTCAGCG +
Preference number: 2 (lower is better)
Translates to: REGAVGQHGHVPQQLVAAPRRRA*RRGPSA
Trigger: CGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGG...TGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp CCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTCCTTCAGGAAGCGGGAGACGACGAAGTACTCCAGGTaGGGGCCCCCAGCTCGCGGC +
Preference number: 2 (lower is better)
Translates to: PATGRSWKPVRSFRKRETTKYSR*GPPARG
Trigger: GCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGT...CGTCTCCCGCTTCCTGAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR GCA 90 bp GTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTCCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGT +
Preference number: 2 (lower is better)
Translates to: VPGGQQAGHRPQLEARALQQSAS*AGGTPG
Trigger: ACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTG...GAGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp GTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCGGCTCCGAGAAGCCCGGGTaGTCCAAGTCCAGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: VRSASMGTCPSSSWQQSGSEKPG*SKSRSG
Trigger: CCCTGACCTGGACTTGGACCACCCGGGCTTCTCGGA...GCCGGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp GCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCCCCGCAGGCGTGCGTaGCGTAGAGGCCCTTCAGCG +
Preference number: 2 (lower is better)
Translates to: AAEALQQSKGLQVLPAGVPRRRA*RRGPSA
Trigger: CGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGG...CACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp CGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTGCCACAGGCCGCAGCTaGAAGCCCGTGCGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: RRCGRPAWARAPAARGSSATGRS*KPVRSF
Trigger: GAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGC...ACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGCAGCAGGGAGGGCATaGGGGGCACCCGGGACCCAG +
Preference number: 2 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGAAGRA*GAPGTQ
Trigger: CTGGGTCCCGGGTGCCCCCCATGCCCTCCCTGCTGC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
3UTR-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGAGGACCAGGGGAGGTTaGGAAGGGCCCTCAGGGACG +
Preference number: 2 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRRTRGG*EGPSGT
Trigger: CGTCCCTGAGGGCCCTTCCCAACCTCCCCTGGTCCT...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
3UTR-3UTR TCA 90 bp AGGGACGCCAGGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCGCTGCGCACGTCCTCTaGCACCTGGCGCACACCACT +
Preference number: 2 (lower is better)
Translates to: RDARPMSCENCAKVRSASAAHVL*HLAHTT
Trigger: AGTGGTGTGCGCCAGGTGTCAGAGGACGTGCGCAGC...GCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGCGTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR GCA 90 bp TCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCACGCAAAGGCCTCCAGGTaGTCCCCGCAGGCGTGCGTG +
Preference number: 2 (lower is better)
Translates to: SGSGECMGEDAWRIYWVHAKASR*SPQACV
Trigger: CACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGC...GTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp AGCTCGTGGCAGCAGTCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGACGTCCTCTGACACCTaGCGCACACCACTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: SSWQQSGSGECMGEDAWRTSSDT*RTPLSR
Trigger: CCTGCTCAGTGGTGTGCGCCAGGTGTCAGAGGACGT...CCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGACTGCTGCCACGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp GGACGCCAGGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGCTCAGGGGAGTGCATaGGCGAGGACGCGTGGCGGA +
Preference number: 2 (lower is better)
Translates to: GRQANVLRELREGAVGQHAQGSA*ARTRGG
Trigger: TCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGC...ATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
3UTR-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGAGGACCAGGGGAGGTTaGGAAGGGCCCTCAGGGACG +
Preference number: 2 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQRTRGG*EGPSGT
Trigger: CGTCCCTGAGGGCCCTTCCCAACCTCCCCTGGTCCT...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
3UTR-3UTR GCA 90 bp AGCTCGTGGCAGCAGTCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGGGCGGATATACTGGGTaGACTGGAACACGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: SSWQQSGSGECMGEDAWRGGYTG*TGTRGR
Trigger: CCTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCC...CCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGACTGCTGCCACGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
3UTR-3UTR CCA 90 bp ACCTCCTTCCAGGTGGCAATCTCCTCGGCGGTGTACTCCACACGGGGAATCGGGCCAGCTCGCGGCCTCTaGGCGGGCCGGGTCTCTAGA +
Preference number: 2 (lower is better)
Translates to: TSFQVAISSAVYSTRGIGPARGL*AGRVSR
Trigger: TCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGG...CCCGATTCCCCGTGTGGAGTACACCGCCGAGGAGATTGCCACCTGGAAGGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp GGTGCTCCCCGCAGGCGTGCGTGGCGTAGAGGCCCTTCAGCGTGGTGTAGACCTTCCGAGAAGCCCGGGTaGTCCAAGTCCAGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: GAPRRRAWRRGPSAWCRPSEKPG*SKSRSG
Trigger: CCCTGACCTGGACTTGGACCACCCGGGCTTCTCGGA...AGGTCTACACCACGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGGAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGGCAGCAGGGAGGGCATaGGGGGCACCCGGGACCCAG +
Preference number: 2 (lower is better)
Translates to: IVTVIGAADSVREGRRAVAAGRA*GAPGTQ
Trigger: CTGGGTCCCGGGTGCCCCCCATGCCCTCCCTGCTGC...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
3UTR-3UTR TCA 90 bp GTAGACCTCCTTCCAGGTGGCAATCTCCTCGGCGGTGTACTCCACACGGGGAATCCTGGCGCACACCACTaGGCAGGGCGGCCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: VDLLPGGNLLGGVLHTGNPGAHH*AGRPGP
Trigger: GGGACCTGGCCGCCCTGCTCAGTGGTGTGCGCCAGG...ATTCCCCGTGTGGAGTACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp GGAAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGGCCGGGTCTCTAGATaGTGGATTTTGGCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: GSPGRTAGRPQAAAGSPCGRVSR*WILASN
Trigger: GTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCC...GCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp GCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGAGACCTCCTTCCAGGTaGCAATCTCCTCGGCGGTGT +
Preference number: 2 (lower is better)
Translates to: AAEALQQSKGLQVLPAGVRPPSR*QSPRRC
Trigger: ACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCT...CACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp AATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCGCGTGGCGGATATACTaGGTGCACTGGAACACGCGG +
Preference number: 2 (lower is better)
Translates to: NVLRELREGAVGQHGHVPAWRIY*VHWNTR
Trigger: CCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGC...GGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
3UTR-3UTR CCA 90 bp CAGGAAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTCGGGTCTCTAGATGGTaGATTTTGGCTTCAAACGTC +
Preference number: 2 (lower is better)
Translates to: QEVPGGQQAGHRPQLEARRVSRW*ILASNV
Trigger: GACGTTTGAAGCCAAAATCCACCATCTAGAGACCCG...ACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp GTAGACCTCCTTCCAGGTGGCAATCTCCTCGGCGGTGTACTCCACACGGGGAATACGAAGTACTCCAGGTaGGGGCCCCCAGCTCGCGGC +
Preference number: 2 (lower is better)
Translates to: VDLLPGGNLLGGVLHTGNTKYSR*GPPARG
Trigger: GCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGT...ATTCCCCGTGTGGAGTACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp AGGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGAGACCTCCTTCCAGGTaGCAATCTCCTCGGCGGTGT +
Preference number: 2 (lower is better)
Translates to: RPMSCENCAKVRSASMGTRPPSR*QSPRRC
Trigger: ACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCT...CGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGAGGACCAGGGGAGGTTaGGAAGGGCCCTCAGGGACG +
Preference number: 2 (lower is better)
Translates to: STTSPRAHTAVALRSRCRRTRGG*EGPSGT
Trigger: CGTCCCTGAGGGCCCTTCCCAACCTCCCCTGGTCCT...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
3UTR-3UTR TCA 90 bp TGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCACTGGAACACGCGGAAGCTTCCCGGTAGCCGCTaGAGCGCTCCAGCAAAGCAA +
Preference number: 2 (lower is better)
Translates to: CMGEDAWRIYWVHWNTRKLPGSR*SAPAKQ
Trigger: TTGCTTTGCTGGAGCGCTTCAGCGGCTACCGGGAAG...CTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp CGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCGGGTCTCTAGATGGTaGATTTTGGCTTCAAACGTC +
Preference number: 2 (lower is better)
Translates to: RRCGRPAWARAPAARGSSRVSRW*ILASNV
Trigger: GACGTTTGAAGCCAAAATCCACCATCTAGAGACCCG...ACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCAGCAGGGAGGGCATaGGGGGCACCCGGGACCCAG +
Preference number: 2 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRAAGRA*GAPGTQ
Trigger: CTGGGTCCCGGGTGCCCCCCATGCCCTCCCTGCTGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
3UTR-3UTR CCA 90 bp CTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGGCGGTACACCTGGGGCCGGGTCTCTAGATaGTGGATTTTGGCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: LYWKAISAISFLRWRYTWGRVSR*WILASN
Trigger: GTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCC...CCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR CCA 72 bp TCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTaGAAGCCCGTGCGCTCCTTCAGGAAGCGGGAGACG +
Preference number: 3 (lower is better)
Translates to: SRADSRPATGRS*KPVRSFRKRET
Trigger: CGTCTCCCGCTTCCTGAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR TCA 72 bp GGCTGCGCACGTCCTCTGACACCTGGCGCACACCACTaGGCAGGGCGGCCAGGTCCCCTCGGCGCACCTCGA +
Preference number: 3 (lower is better)
Translates to: GCARPLTPGAHH*AGRPGPLGAPR
Trigger: TCGAGGTGCGCCGAGGGGACCTGGCCGCCCTGCTCAGTGGTGTGCGCCAGGTGTCAGAGGACGTGCGCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR GCA 72 bp ACGCCAGGCCAATGTCCTGCGAGAACTGCGCGAAGGTaGGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: TPGQCPARTARR*GRPAWARAPAA
Trigger: AGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
3UTR CCA 72 bp CCCCGCAGGCGTGCGTGGCGTAGAGGCCCTTCAGCGTaGTGTAGACCTCCTTCCAGGTGGCAATCTCCTCGG +
Preference number: 3 (lower is better)
Translates to: PRRRAWRRGPSA*CRPPSRWQSPR
Trigger: CCGAGGAGATTGCCACCTGGAAGGAGGTCTACACCACGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR CCA 72 bp GCAGCTCGTGGCAGCAGTCCGGCTCAGGGGAGTGCATaGGCGAGGACGCGTGGCGGATATACTGGGTGCACT +
Preference number: 3 (lower is better)
Translates to: AARGSSPAQGSA*ARTRGGYTGCT
Trigger: AGTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGACTGCTGCCACGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
3UTR-3UTR CAA 90 bp CGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGCTCTGACACTTTTCTaGGGAACCAGGGGACCTTGG +
Preference number: 3 (lower is better)
Translates to: REGAVGQHGHVPQQLVAAALTLF*GTRGPW
Trigger: CCAAGGTCCCCTGGTTCCCAAGAAAAGTGTCAGAGC...TGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR CCA 72 bp AAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCGTaGCGTAGAGGCCCTTCAGCGTGGTGTAGACCTCCT +
Preference number: 3 (lower is better)
Translates to: KQRPPGAPRRRA*RRGPSAWCRPP
Trigger: AGGAGGTCTACACCACGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR CCA 72 bp CAGTCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTaGCGGATATACTGGGTGCACTGGAACACGCGGAAG +
Preference number: 3 (lower is better)
Translates to: QSGSGECMGEDA*RIYWVHWNTRK
Trigger: CTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
3UTR GCA 72 bp GCCTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGTCCGAGAAGCCCGGGT +
Preference number: 3 (lower is better)
Translates to: ACTGRRSQQSAS*AGGTPGPRSPG
Trigger: ACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR CCA 72 bp TACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCC +
Preference number: 3 (lower is better)
Translates to: YWKAISAISFLR*RYTWSEKPGWS
Trigger: GGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR CCA 72 bp ATCTCAGCAATCAGCTTCCTGCGCTGGCGGTACACCTaGTCCGAGAAGCCCGGGTGGTCCAAGTCCAGGTCA +
Preference number: 3 (lower is better)
Translates to: ISAISFLRWRYT*SEKPGWSKSRS
Trigger: TGACCTGGACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
3UTR-3UTR CAA 90 bp TTACACAGCCCGAACTCCACCGTGAACCAGTACAGCGTGGACAGCTTCTCAATTGCTCTGACACTTTTCTaGGGAACCAGGGGACCTTGG +
Preference number: 3 (lower is better)
Translates to: LHSPNSTVNQYSVDSFSIALTLF*GTRGPW
Trigger: CCAAGGTCCCCTGGTTCCCAAGAAAAGTGTCAGAGC...AATTGAGAAGCTGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGCTGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR CCA 90 bp GCGCACGAAGTACTCCAGGTGGGGGCCCCCAGCTCGCGGCCTCTGGGCGGGCCGTGGTGGCGTCGGGGGTaGGCATGGCTCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: AHEVLQVGAPSSRPLGGPWWRRG*AWLSVE
Trigger: CTCCACACTGAGCCATGCCCACCCCCGACGCCACCA...CGGCCCGCCCAGAGGCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGTGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp AGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTGCTCAGGGGAGTGCATaGGCGAGGACGCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: SPGRTAGRPQAAAGSPCAAQGSA*ARTRGG
Trigger: TCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGC...AGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR TCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCTGGCGCACACCACTaGGCAGGGCGGCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRPGAHH*AGRPGP
Trigger: GGGACCTGGCCGCCCTGCTCAGTGGTGTGCGCCAGG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp TGGCCAGGAAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCGCCAGCATGGGCACGTaGCCCAGCAGCTCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WPGSPGRTAGRPQAAAGSASMGT*PSSSWQ
Trigger: CTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGC...GCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTTCCTGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGAGCGCCGCACGGCCTaGGGGCTGTCCAGCACGTCG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRERRTA*GLSSTS
Trigger: CGACGTGCTGGACAGCCCCCAGGCCGTGCGGCGCTC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TGGCCAGGAAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCGCCACAGGCCGCAGCTaGAAGCCCGTGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WPGSPGRTAGRPQAAAGSATGRS*KPVRSF
Trigger: GAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGC...GCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTTCCTGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp CCAGGTGGGGGCCCCCAGCTCGCGGCCTCTGGGCGGGCCGGGTCTCTAGATGGTATGTCCTGCGAGAACTaGGCGAAGGTGCGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PGGGPQLAASGRAGSLDGMSCEN*AKVRSA
Trigger: GGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACAT...ACCATCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGGGGGCCCCCACCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCTTGGCCTGTGGCGTaGTGGCGTCGGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRPWPVA*WRRGWA
Trigger: TGCCCACCCCCGACGCCACCACGCCACAGGCCAAGG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGCTCGTGGCAGCAGTCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGGAAGCCCTTGGCCTGTaGCGTGGTGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SSWQQSGSGECMGEDAWREALGL*RGGVGG
Trigger: ACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTC...CCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGACTGCTGCCACGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp AGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCGCCCTGCGGAAGCCCTTaGCCTGTGGCGTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RCGRPAWARAPAARGSSPPCGSP*PVAWWR
Trigger: ACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGG...CGGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp AGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCGCGCTGGCGGTACACCTaGTCCGAGAAGCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RCGRPAWARAPAARGSSPRWRYT*SEKPGW
Trigger: CCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCG...CGGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGAGCGCCGCACGGCCTaGGGGCTGTCCAGCACGTCG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQERRTA*GLSSTS
Trigger: CGACGTGCTGGACAGCCCCCAGGCCGTGCGGCGCTC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCAGCAGGGAGGGCATaGGGGGCACCCGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQAAGRA*GAPGTQ
Trigger: CTGGGTCCCGGGTGCCCCCCATGCCCTCCCTGCTGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCCCGCAGGCGTGCGTaGCGTAGAGGCCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRPRRRA*RRGPSA
Trigger: CGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGCTCAGGGGAGTGCATaGGCGAGGACGCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: REGAVGQHGHVPQQLVAAAQGSA*ARTRGG
Trigger: TCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGC...TGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp ACCTGGCGCACACCACTGAGCAGGGCGGCCAGGTCCCCTCGGCGCACCTCGAGGGCGCCGAGGGCTTGGTaGCCCTGCCCTCTTACCATG +
Preference number: 4 (lower is better)
Translates to: TWRTPLSRAARSPRRTSRAPRAW*PCPLTM
Trigger: CATGGTAAGAGGGCAGGGCCACCAAGCCCTCGGCGC...CCTCGAGGTGCGCCGAGGGGACCTGGCCGCCCTGCTCAGTGGTGTGCGCCAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS-3UTR TCA 90 bp AGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTCTTCCCGGTAGCCGCTaGAGCGCTCCAGCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SPGRTAGRPQAAAGSPCALPGSR*SAPAKQ
Trigger: TTGCTTTGCTGGAGCGCTTCAGCGGCTACCGGGAAG...AGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGGGCTCCGAGGGGACTaGAGCGGCCGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGGLRGD*SGRCCH
Trigger: GTGGCAGCAGCGGCCGCTGCAGTCCCCTCGGAGCCC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GCGCACGAAGTACTCCAGGTGGGGGCCCCCAGCTCGCGGCCTCTGGGCGGGCCGCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGT +
Preference number: 4 (lower is better)
Translates to: AHEVLQVGAPSSRPLGGPQQSAS*AGGTPG
Trigger: ACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTG...CGGCCCGCCCAGAGGCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp CAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCGTGGCGTAGAGGCCCTTCAGCGGCCAGCATGGGCACGTaGCCCAGCAGCTCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QRPPGAPRRRAWRRGPSAASMGT*PSSSWQ
Trigger: CTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGC...CGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp TGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCGCAAAGGCCTCCAGGTaGTCCCCGCAGGCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: CENCAKVRSASMGTCPSSAKASR*SPQACV
Trigger: CACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGC...GCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGCAAAGGCCTCCAGGTaGTCCCCGCAGGCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRAKASR*SPQACV
Trigger: CACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGGAAGCCCTTGGCCTGTaGCGTGGTGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LRELREGAVGQHGHVPQQEALGL*RGGVGG
Trigger: ACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTC...CTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCCTGCGGAAGCCCTTaGCCTGTGGCGTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRPCGSP*PVAWWR
Trigger: ACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGCGCCGAGGGCTTGGTaGCCCTCGGGGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRAPRAW*PSGRRA
Trigger: TGCTCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCACCAGCTCGCGGCCTCTaGGCGGGCCGGGTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: CPARTARRCGRPAWARAPPARGL*AGRVSR
Trigger: TCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGG...TGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGCCAGCTCGCGGCCTCTaGGCGGGCCGGGTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQPARGL*AGRVSR
Trigger: TCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGG...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACGTCCTCTGACACCTGGCGCACACCACTGAGCAGGGCGGCCAGGTCCCCTCGGACGAAGTACTCCAGGTaGGGGCCCCCAGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: TSSDTWRTPLSRAARSPRTKYSR*GPPARG
Trigger: GCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGT...CCGAGGGGACCTGGCCGCCCTGCTCAGTGGTGTGCGCCAGGTGTCAGAGGACGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp GGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTCCTTCATCCGAGAAGCCCGGGTaGTCCAAGTCCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRTAGRPQAAAGSPCAPSSEKPG*SKSRSG
Trigger: CCCTGACCTGGACTTGGACCACCCGGGCTTCTCGGA...TGAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCGCTGGCGGTACACCTaGTCCGAGAAGCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRRWRYT*SEKPGW
Trigger: CCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CAGGCTGGCCAGGAAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: QAGQEVPGGQQAGHRPQLISFLR*RYTWSE
Trigger: CTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGAT...CAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTTCCTGGCCAGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp AAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: KSRADSRPATGRSWKPVRISFLR*RYTWSE
Trigger: CTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGAT...GCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp TGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCACCCCGCAGGCGTGCGTaGCGTAGAGGCCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: CPARTARRCGRPAWARAPPRRRA*RRGPSA
Trigger: CGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGG...TGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TCCAGGTGGGGGCCCCCAGCTCGCGGCCTCTGGGCGGGCCGGGTCTCTAGATGGGCGTGGCGGATATACTaGGTGCACTGGAACACGCGG +
Preference number: 4 (lower is better)
Translates to: SRWGPPARGLWAGRVSRWAWRIY*VHWNTR
Trigger: CCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGC...CCATCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGGGGGCCCCCACCTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGCTCAGGGGAGTGCATaGGCGAGGACGCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRAQGSA*ARTRGG
Trigger: TCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCGTCGGGGGTGGGCATaGCTCAGTGTGGAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRRRGWA*LSVEVR
Trigger: CCGGACCTCCACACTGAGCCATGCCCACCCCCGACG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000352909.8
CDS-3UTR TCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGTGCGGGCGTCCTCGATaGGGCTCTGCCTGCGCCCAA +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQCGRPR*GSACAQ
Trigger: TTGGGCGCAGGCAGAGCCTCATCGAGGACGCCCGCA...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp CAGGAAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCCCGAACTCCACCGTaGACCAGTACAGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: QEVPGGQQAGHRPQLEARARTPP*TSTAWT
Trigger: TGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGC...ACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000416223.5
CDS-3UTR GCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGCTCAGACACGGCCCTaGGGAAGCCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRAQTRP*GSPWPV
Trigger: CACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGGCCAGCATGGGCACGTaGCCCAGCAGCTCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AAEALQQSKGLQVLPAGVASMGT*PSSSWQ
Trigger: CTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGC...CACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCAGCATGGGCACGTaGCCCAGCAGCTCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQASMGT*PSSSWQ
Trigger: CTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTCCTTCAGGAAGCGGGAGACGATGTCCTGCGAGAACTaGGCGAAGGTGCGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PATGRSWKPVRSFRKRETMSCEN*AKVRSA
Trigger: GGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACAT...CGTCTCCCGCTTCCTGAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGAAGGGCGGAGGGCAGTaGAGCAGCCCCCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQKGGGQ*SSPQDP
Trigger: AGGGTCCTGGGGGCTGCTGCACTGCCCTCCGCCCTT...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCAAAGGCCTCCAGGTaGTCCCCGCAGGCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQAKASR*SPQACV
Trigger: CACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp AGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTTACCATGATGGCCTCTaGCTGCTTGGCGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPGRTAGRPQAAAGSPCAYHDGL*LLGVQL
Trigger: GAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTA...AGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGTGGTGGCGTCGGGGGTaGGCATGGCTCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRWWRRG*AWLSVE
Trigger: CTCCACACTGAGCCATGCCCACCCCCGACGCCACCA...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp GTAGCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCCCTTGGCCTGTGGCGTaGTGGCGTCGGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VAAEALQQSKGLQVLPAGPWPVA*WRRGWA
Trigger: TGCCCACCCCCGACGCCACCACGCCACAGGCCAAGG...GCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGAAGCCCTTGGCCTGTaGCGTGGTGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQEALGL*RGGVGG
Trigger: ACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CGCCAGGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCCCTGCGGAAGCCCTTaGCCTGTGGCGTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RQANVLRELREGAVGQHGPCGSP*PVAWWR
Trigger: ACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGG...CCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGACAGCGCCGAGGGCTTaGTGGCCCTCGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRTAPRA*WPSGRR
Trigger: TCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGT...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGACGAAGTACTCCAGGTaGGGGCCCCCAGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQTKYSR*GPPARG
Trigger: GCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGT...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CAGGAAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTACGTCCTCTGACACCTaGCGCACACCACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QEVPGGQQAGHRPQLEARTSSDT*RTPLSR
Trigger: CCTGCTCAGTGGTGTGCGCCAGGTGTCAGAGGACGT...ACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGCGCTGGCGGTACACCTaGTCCGAGAAGCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQRWRYT*SEKPGW
Trigger: CCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCG...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCAGACCTCCTTCCAGGTaGCAATCTCCTCGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: KSRADSRPATGRSWKPVRRPPSR*QSPRRC
Trigger: ACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCT...GCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp AGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTGAGACGTCCTCCAGCTaGGGGATATTGTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SPGRTAGRPQAAAGSPCAETSSS*GILSSR
Trigger: CCGGGAAGACAATATCCCCCAGCTGGAGGACGTCTC...AGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCACAGGCCGCAGCTaGAAGCCCGTGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQATGRS*KPVRSF
Trigger: GAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGTGCCCCAGCAGCTCGTaGCAGCAGTCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQCPSSS*QQSGSG
Trigger: CCCTGAGCCGGACTGCTGCCACGAGCTGCTGGGGCA...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCTGCCCCAGCAGCTCGTaGCAGCAGTCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLKRSSKAKASRCSPQACCPSSS*QQSGSG
Trigger: CCCTGAGCCGGACTGCTGCCACGAGCTGCTGGGGCA...GCACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp AAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCGCCCGTGCGCTCAGGTaGCAATCTCCTCGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: KVRSASMGTCPSSSWQQSARALR*QSPRRC
Trigger: ACACCGCCGAGGAGATTGCCACCTGAGCGCACGGGC...GGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416223.5
CDS-3UTR TCA 90 bp ACCTCCTTCCAGGTGGCAATCTCCTCGGCGGTGTACTCCACACGGGGAATCGGGCCTGGCGCACACCACTaGGCAGGGCGGCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TSFQVAISSAVYSTRGIGPGAHH*AGRPGP
Trigger: GGGACCTGGCCGCCCTGCTCAGTGGTGTGCGCCAGG...CCCGATTCCCCGTGTGGAGTACACCGCCGAGGAGATTGCCACCTGGAAGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR TCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGGGGCGCTGGATGCGTaGGGCATAGCTCCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRGALDA*GIAPEL
Trigger: AAGCTCAGGAGCTATGCCTCACGCATCCAGCGCCCC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp CCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTCCTTCAGGAAGCGGGAGACGCTTCCCGGTAGCCGCTaGAGCGCTCCAGCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: PATGRSWKPVRSFRKRETLPGSR*SAPAKQ
Trigger: TTGCTTTGCTGGAGCGCTTCAGCGGCTACCGGGAAG...CGTCTCCCGCTTCCTGAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGCCAGCATGGGCACGTaGCCCAGCAGCTCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGASMGT*PSSSWQ
Trigger: CTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTATGTCCTGCGAGAACTaGGCGAAGGTGCGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RRCGRPAWARAPAARGSSMSCEN*AKVRSA
Trigger: GGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACAT...ACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp CCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCTGGTGGCGTCGGGGGTaGGCATGGCTCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PLKRSSKAKASRCSPQACWWRRG*AWLSVE
Trigger: CTCCACACTGAGCCATGCCCACCCCCGACGCCACCA...GCACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGTGGCCTCTGCCTGCTTaGCGTCCAGCTCAGACACGG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRWPLPA*RPAQTR
Trigger: CCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCA...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGCGCCGAGGGCTTGGTaGCCCTCGGGGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGAPRAW*PSGRRA
Trigger: TGCTCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CAGTCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGACGAAGTACTCCAGGTaGGGGCCCCCAGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: QSGSGECMGEDAWRIYWVTKYSR*GPPARG
Trigger: GCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGT...CACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGTCCGAGAAGCCCGGGTaGTCCAAGTCCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRSEKPG*SKSRSG
Trigger: CCCTGACCTGGACTTGGACCACCCGGGCTTCTCGGA...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTCGCCGTGCCTGTACTaGAAGGCGATCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: KSRADSRPATGRSWKPVRSPCLY*KAISAI
Trigger: GATTGCTGAGATCGCCTTCCAGTACAGGCACGGCGA...GCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000416223.5
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGTGTCCAGCTCATCCTaGACACCCTCCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRVSSSS*TPSRER
Trigger: GCGCTCCCTGGAGGGTGTCCAGGATGAGCTGGACAC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp GTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCGGCAGACCTCCTTCCAGGTaGCAATCTCCTCGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: VRSASMGTCPSSSWQQSGRPPSR*QSPRRC
Trigger: ACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCT...GCCGGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp GGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCTCCTTCAAGAGGCCCTTCAGCGTaGTGTAGACCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRTAGRPQAAAGSPCAPSRGPSA*CRPPSR
Trigger: CCTGGAAGGAGGTCTACACCACGCTGAAGGGCCTCT...TGAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp CAGGTCCCCTCGGCGCACCTCGAGGCGCACGAAGTACTCCAGGTGGGGGCCCCCAGAGGCCCTTCAGCGTaGTGTAGACCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QVPSAHLEAHEVLQVGAPRGPSA*CRPPSR
Trigger: CCTGGAAGGAGGTCTACACCACGCTGAAGGGCCTCT...GGGGGCCCCCACCTGGAGTACTTCGTGCGCCTCGAGGTGCGCCGAGGGGACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGCTCAGGGGAGTGCATaGGCGAGGACGCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGAQGSA*ARTRGG
Trigger: TCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp GGACGCCAGGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATTGCCCCAGCAGCTCGTaGCAGCAGTCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRQANVLRELREGAVGQHCPSSS*QQSGSG
Trigger: CCCTGAGCCGGACTGCTGCCACGAGCTGCTGGGGCA...ATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp GCAGTCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCCACAGGCCGCAGCTaGAAGCCCGTGCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: AVRLRGVHGRGRVADILGATGRS*KPVRSG
Trigger: ACCTGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGC...ACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416223.5
CDS-3UTR TCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGCTGCGCACGTCCTCTaGCACCTGGCGCACACCACT +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGAAHVL*HLAHTT
Trigger: AGTGGTGTGCGCCAGGTGTCAGAGGACGTGCGCAGC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp AGGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGGGGCTTGGTGGCCCATaGTGGCCTCTGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RPMSCENCAKVRSASMGTGLGGP*WPLPAW
Trigger: CCAAGCAGGCAGAGGCCATCATGGGCCACCAAGCCC...CGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR TCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCTTCCCGGTAGCCGCTaGAGCGCTCCAGCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRLPGSR*SAPAKQ
Trigger: TTGCTTTGCTGGAGCGCTTCAGCGGCTACCGGGAAG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGGCCCCGGGGCGCCCATaGTGGCCTCTGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVAPGRP*WPLPAW
Trigger: CCAAGCAGGCAGAGGCCATCATGGGCGCCCCGGGGC...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381175.5
CDS-3UTR GCA 90 bp CCAGGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCAGCTCAGACACGGCCCTaGGGAAGCCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PGQCPARTARRCGRPAWAAQTRP*GSPWPV
Trigger: CACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGC...TGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGTCCTCGATGAGGCTCTaGCTGCGCCCAATGAACCGC +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRSSMRL*LRPMNR
Trigger: GCGGTTCATTGGGCGCAGGCAGAGCCTCATCGAGGA...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGT +
Preference number: 4 (lower is better)
Translates to: AKVRSASMGTCPSSSWQQQQSAS*AGGTPG
Trigger: ACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTG...CTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR GCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGCCAGGCCAATGTCCTaGGAGAACTGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRARPMS*ENCAKV
Trigger: CACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCGGCTTCACCTCCCCGTTCTaGTTACACAGCCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: VRSASMGTCPSSSWQQSGFTSPF*LHSPNS
Trigger: GGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAA...GCCGGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000416223.5
CDS-3UTR GCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCCATGATGGCCTCTaGCTGCTTGGCGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQAHDGL*LLGVQL
Trigger: GAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381175.5
CDS-3UTR GCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGATGCAGCTGGGGCTaGAGTTCCAGGCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQGCSWG*SSRPRR
Trigger: TCTCCGTGGCCTGGAACTGCAGCCCCAGCTGCATCC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCTGGTGGCGTCGGGGGTaGGCATGGCTCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGWWRRG*AWLSVE
Trigger: CTCCACACTGAGCCATGCCCACCCCCGACGCCACCA...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGTGGCCTCTGCCTGCTTaGCGTCCAGCTCAGACACGG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQWPLPA*RPAQTR
Trigger: CCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCA...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCTCCGAGAAGCCCGGGTaGTCCAAGTCCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: MSCENCAKVRSASMGTCPSEKPG*SKSRSG
Trigger: CCCTGACCTGGACTTGGACCACCCGGGCTTCTCGGA...GGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRISFLR*RYTWSE
Trigger: CTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGAT...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCTGCCCCAGCAGCTCGTaGCAGCAGTCCCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGCPSSS*QQSQVA
Trigger: TGCCACCTGGGACTGCTGCCACGAGCTGCTGGGGCA...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333684.9
CDS-3UTR CCA 90 bp GCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGACAGCGCCGAGGGCTTaGTGGCCCATGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AAEALQQSKGLQVLPAGVTAPRA*WPMMAS
Trigger: AGAGGCCATCATGGGCCACCAAGCCCTCGGCGCTGT...CACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR CCA 90 bp ATCAGCTTCCTGCGCTGGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGGCCACAGGCCGCAGCTaGAAGCCCGTGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ISFLRWRYTWSEKPGWSKATGRS*KPVRSF
Trigger: GAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGC...CTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGATGGGCGAGGACGCGTaGCGGATATACTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRMGEDA*RIYWVH
Trigger: GTGCACCCAGTATATCCGCCACGCGTCCTCGCCCAT...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGAACCGCGGGGACCTTaGGGTGGGGGTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGEPRGP*GGGVGC
Trigger: GCATCCTACACCCCCACCCCAAGGTCCCCGCGGTTC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp GTAGCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCACAGCGCCGAGGGCTTaGTGGCCCTGCCCTCTTACC +
Preference number: 4 (lower is better)
Translates to: VAAEALQQSKGLQVLPAGTAPRA*WPCPLT
Trigger: GGTAAGAGGGCAGGGCCACCAAGCCCTCGGCGCTGT...GCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS-3UTR TCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCCGAACTCCACCGTaGACCAGTACAGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQARTPP*TSTAWT
Trigger: TGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGCCTGCCCTCTTACCATaGTGGCCTCTGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQPALLP*WPLPAW
Trigger: CCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGG...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381178.5
CDS-3UTR GCA 90 bp AAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGT +
Preference number: 4 (lower is better)
Translates to: KVRSASMGTCPSSSWQQSQQSAS*AGGTPG
Trigger: ACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTG...GGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR GCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCATGTCCTGCGAGAACTaGGCGAAGGTGCGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGMSCEN*AKVRSA
Trigger: GGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACAT...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCAGGCCAATGTCCTaGGAGAACTGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQARPMS*ENCAKV
Trigger: CACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GACGCCAGGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGCCCATGATGGCCTCTaGCTGCTTGGCGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: DARPMSCENCAKVRSASMAHDGL*LLGVQL
Trigger: GAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGGC...CATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR GCA 90 bp GCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTGGCGGATATACTGGGTaGACTGGAACACGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARTARRCGRPAWARAPAAGGYTG*TGTRGR
Trigger: CCTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCC...AGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCCTTGGCCTGTGGCGTaGTGGCGTCGGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVPWPVA*WRRGWA
Trigger: TGCCCACCCCCGACGCCACCACGCCACAGGCCAAGG...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCACTGGCCTCTGCCTGCTTaGCGTCCAGCTCAGACACGG +
Preference number: 4 (lower is better)
Translates to: SGSGECMGEDAWRIYWVHWPLPA*RPAQTR
Trigger: CCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCA...GTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp GCGCACGAAGTACTCCAGGTGGGGGCCCCCAGCTCGCGGCCTCTGGGCGGGCCGCGGGTCTCTAGATGGTaGATTTTGGCTTCAAACGTC +
Preference number: 4 (lower is better)
Translates to: AHEVLQVGAPSSRPLGGPRVSRW*ILASNV
Trigger: GACGTTTGAAGCCAAAATCCACCATCTAGAGACCCG...CGGCCCGCCCAGAGGCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGTGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp AAGTCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTGGAAGCCCGTGCGCGGCCGGGTCTCTAGATaGTGGATTTTGGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KSRADSRPATGRSWKPVRGRVSR*WILASN
Trigger: GTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCC...GCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp CTCCAGCTGGGGGATATTGTCTTCCCGGTAGCCGCTGAAGCGCTCCAGCAAAGCCCAGCTCGCGGCCTCTaGGCGGGCCGGGTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LQLGDIVFPVAAEALQQSPARGL*AGRVSR
Trigger: TCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGG...GCTTTGCTGGAGCGCTTCAGCGGCTACCGGGAAGACAATATCCCCCAGCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGACGTCCTCTGACACCTaGCGCACACCACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQTSSDT*RTPLSR
Trigger: CCTGCTCAGTGGTGTGCGCCAGGTGTCAGAGGACGT...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCTCCGAGAAGCCCGGGTaGTCCAAGTCCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGSEKPG*SKSRSG
Trigger: CCCTGACCTGGACTTGGACCACCCGGGCTTCTCGGA...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCACTGGAACACGCGGACGCTGGCGGTACACCTaGTCCGAGAAGCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SAWARTRGGYTGCTGTRGRWRYT*SEKPGW
Trigger: CCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCG...TCCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGTGTCCAGCACGTCGATaGCCAGCGTGTACGGGTCGA +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQCPARR*PACTGR
Trigger: TCGACCCGTACACGCTGGCCATCGACGTGCTGGACA...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGTGTCCAGCTCATCCTaGACACCCTCCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGVSSSS*TPSRER
Trigger: GCGCTCCCTGGAGGGTGTCCAGGATGAGCTGGACAC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGATGGCACTCAGCGCATaGGCAAGGGTGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRMALSA*ARVSSS
Trigger: TGAGCTGGACACCCTTGCCCATGCGCTGAGTGCCAT...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCCCCGCAGGCGTGCGTaGCGTAGAGGCCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVPRRRA*RRGPSA
Trigger: CGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGG...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCGTGGCGGATATACTaGGTGCACTGGAACACGCGG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQAWRIY*VHWNTR
Trigger: CCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGTGCGGGCGTCCTCGATaGGGCTCTGCCTGCGCCCAA +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVCGRPR*GSACAQ
Trigger: TTGGGCGCAGGCAGAGCCTCATCGAGGACGCCCGCA...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGCCCGAACTCCACCGTaGACCAGTACAGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGARTPP*TSTAWT
Trigger: TGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp AATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGCCCCCTGCCCTCTTACCATaGTGGCCTCTGCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: NVLRELREGAVGQHGHVPPALLP*WPLPAW
Trigger: CCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGG...GGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS-3UTR GCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQMMASA*LASSSD
Trigger: GTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCAT...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGT +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQQQSAS*AGGTPG
Trigger: ACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTG...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGCCAGGCCAATGTCCTaGGAGAACTGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGARPMS*ENCAKV
Trigger: CACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GCAGTCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCCAGGCCAATGTCCTaGGAGAACTGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AVRLRGVHGRGRVADILGARPMS*ENCAKV
Trigger: CACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGC...ACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR GCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGTTCACCTCCCCGTTCTaGTTACACAGCCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRFTSPF*LHSPNS
Trigger: GGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAA...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGAAGGGCGGAGGGCAGTaGAGCAGCCCCCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVKGGGQ*SSPQDP
Trigger: AGGGTCCTGGGGGCTGCTGCACTGCCCTCCGCCCTT...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GTAGCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCAGGGCTTGGTGGCCCTaGCCTCTTACCATGATGGCC +
Preference number: 4 (lower is better)
Translates to: VAAEALQQSKGLQVLPAGRAWWP*PLTMMA
Trigger: GGCCATCATGGTAAGAGGGCAGGGCCACCAAGCCCT...GCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS-3UTR CCA 90 bp CCGTTCTGCTTACACAGCCCGAACTCCACCGTGAACCAGTACAGCGTGGACAGCCCTTGGCCTGTGGCGTaGTGGCGTCGGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PFCLHSPNSTVNQYSVDSPWPVA*WRRGWA
Trigger: TGCCCACCCCCGACGCCACCACGCCACAGGCCAAGG...GCTGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGCTGTGTAAGCAGAACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGAAGCCCTTGGCCTGTaGCGTGGTGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCREALGL*RGGVGG
Trigger: ACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGCCCTGCGGAAGCCCTTaGCCTGTGGCGTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRPCGSP*PVAWWR
Trigger: ACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGG...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGGCGCCGAGGGCTTGGTaGCCCTCGGGGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVAPRAW*PSGRRA
Trigger: TGCTCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGC...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGACGAAGTACTCCAGGTaGGGGCCCCCAGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRTKYSR*GPPARG
Trigger: GCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGT...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CCCGCAGGCGTGCGTGGCGTAGAGGCCCTTCAGCGTGGTGTAGACCTCCTTCCAACGTCCTCTGACACCTaGCGCACACCACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PAGVRGVEALQRGVDLLPTSSDT*RTPLSR
Trigger: CCTGCTCAGTGGTGTGCGCCAGGTGTCAGAGGACGT...TGGAAGGAGGTCTACACCACGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCACGTCCTCTGACACCTaGCGCACACCACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGTSSDT*RTPLSR
Trigger: CCTGCTCAGTGGTGTGCGCCAGGTGTCAGAGGACGT...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp GGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGGCGGTACACCTGGTCCGAGACGCTGGCGGTACACCTaGTCCGAGAAGCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRRSQQSASCAGGTPGPRRWRYT*SEKPGW
Trigger: CCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCG...TCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGISFLR*RYTWSE
Trigger: CTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGAT...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCTGTCCAGCACGTCGATaGCCAGCGTGTACGGGTCGA +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGCPARR*PACTGR
Trigger: TCGACCCGTACACGCTGGCCATCGACGTGCTGGACA...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGCGTGCACCTAGCCAATaGCACTCAGCGCATGGGCAA +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQRAPSQ*HSAHGQ
Trigger: TTGCCCATGCGCTGAGTGCCATTGGCTAGGTGCACG...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCATGGGCGAGGACGCGTaGCGGATATACTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGMGEDA*RIYWVH
Trigger: GTGCACCCAGTATATCCGCCACGCGTCCTCGCCCAT...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGCTCAGGGGAGTGCATaGGCGAGGACGCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRAQGSA*ARTRGG
Trigger: TCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGTGCCCCAGCAGCTCGTaGCAGCAGTCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVCPSSS*QQSGSG
Trigger: CCCTGAGCCGGACTGCTGCCACGAGCTGCTGGGGCA...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGGCTGCGCACGTCCTCTaGCACCTGGCGCACACCACT +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVAAHVL*HLAHTT
Trigger: AGTGGTGTGCGCCAGGTGTCAGAGGACGTGCGCAGC...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp GCCCGGGTGGTCCAAGTCCAGGTCAGGGTCGAACTTGGTGACCAGGTGATGACAGCTGCGCACGTCCTCTaGCACCTGGCGCACACCACT +
Preference number: 4 (lower is better)
Translates to: ARVVQVQVRVELGDQVMTAAHVL*HLAHTT
Trigger: AGTGGTGTGCGCCAGGTGTCAGAGGACGTGCGCAGC...TGTCATCACCTGGTCACCAAGTTCGACCCTGACCTGGACTTGGACCACCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR TCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGTGTCCTTGGCGTCACTaGAGCTCTCAGACACGAAGT +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRCPWRH*SSQTRS
Trigger: ACTTCGTGTCTGAGAGCTTCAGTGACGCCAAGGACA...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGCTCAGACACGGCCCTaGGGAAGCCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRAQTRP*GSPWPV
Trigger: CACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp TCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCACATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SGSGECMGEDAWRIYWVHMMASA*LASSSD
Trigger: GTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCAT...GTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGT +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGQQSAS*AGGTPG
Trigger: ACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTG...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGGCGGTACACCTGGGCAAAGGCCTCCAGGTaGTCCCCGCAGGCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LYWKAISAISFLRWRYTWAKASR*SPQACV
Trigger: CACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGC...CCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGACAGCGCCGAGGGCTTaGTGGCCCTCGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRTAPRA*WPSGRR
Trigger: TCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGT...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGAGCGCCGCACGGCCTaGGGGCTGTCCAGCACGTCG +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRERRTA*GLSSTS
Trigger: CGACGTGCTGGACAGCCCCCAGGCCGTGCGGCGCTC...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCATGGCACTCAGCGCATaGGCAAGGGTGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGMALSA*ARVSSS
Trigger: TGAGCTGGACACCCTTGCCCATGCGCTGAGTGCCAT...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGCAGGGAGGGCATaGGGGGCACCCGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRAAGRA*GAPGTQ
Trigger: CTGGGTCCCGGGTGCCCCCCATGCCCTCCCTGCTGC...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCAGACCTCCTTCCAGGTaGCAATCTCCTCGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGRPPSR*QSPRRC
Trigger: ACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCT...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGAGACGTCCTCCAGCTaGGGGATATTGTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGETSSS*GILSSR
Trigger: CCGGGAAGACAATATCCCCCAGCTGGAGGACGTCTC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCAGCTTCCTGCGCTGGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGTGCGTGGCGGATATACTaGGTGCACTGGAACACGCGG +
Preference number: 4 (lower is better)
Translates to: SASCAGGTPGPRSPGGPSAWRIY*VHWNTR
Trigger: CCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGC...ACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TCAGCTTCCTGCGCTGGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGTATGGGCGAGGACGCGTaGCGGATATACTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SASCAGGTPGPRSPGGPSMGEDA*RIYWVH
Trigger: GTGCACCCAGTATATCCGCCACGCGTCCTCGCCCAT...ACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp CTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGGCGGTACACCTGGGCTCAGGGGAGTGCATaGGCGAGGACGCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LYWKAISAISFLRWRYTWAQGSA*ARTRGG
Trigger: TCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGC...CCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGAACCGCGGGGACCTTaGGGTGGGGGTGTAGGATGC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCREPRGP*GGGVGC
Trigger: GCATCCTACACCCCCACCCCAAGGTCCCCGCGGTTC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp GCCTTCACCTCCCCGTTCTGCTTACACAGCCCGAACTCCACCGTGAACCAGTACGCTGCGCACGTCCTCTaGCACCTGGCGCACACCACT +
Preference number: 4 (lower is better)
Translates to: AFTSPFCLHSPNSTVNQYAAHVL*HLAHTT
Trigger: AGTGGTGTGCGCCAGGTGTCAGAGGACGTGCGCAGC...GTACTGGTTCACGGTGGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR TCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGAGACACGAAGTAGACTaGCTGGTACGTCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRRHEVD*LVRLVL
Trigger: CAAGACCAGACGTACCAGTCAGTCTACTTCGTGTCT...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGTGTCCTTGGCGTCACTaGAGCTCTCAGACACGAAGT +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQCPWRH*SSQTRS
Trigger: ACTTCGTGTCTGAGAGCTTCAGTGACGCCAAGGACA...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGATGTCCTGCGAGAACTaGGCGAAGGTGCGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRMSCEN*AKVRSA
Trigger: GGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACAT...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGATGTCCTGCGAGAACTaGGCGAAGGTGCGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVMSCEN*AKVRSA
Trigger: GGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACAT...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp TGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCACTGGAACACGCGGAAGGCCAGGCCAATGTCCTaGGAGAACTGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CMGEDAWRIYWVHWNTRKARPMS*ENCAKV
Trigger: CACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGC...CTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR GCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCTTCACCTCCCCGTTCTaGTTACACAGCCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGFTSPF*LHSPNS
Trigger: GGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAA...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGGATGCAGCTGGGGCTaGAGTTCCAGGCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRGCSWG*SSRPRR
Trigger: TCTCCGTGGCCTGGAACTGCAGCCCCAGCTGCATCC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGCCTTGGCCTGTGGCGTaGTGGCGTCGGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRPWPVA*WRRGWA
Trigger: TGCCCACCCCCGACGCCACCACGCCACAGGCCAAGG...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGCCAGCTCGCGGCCTCTaGGCGGGCCGGGTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRPARGL*AGRVSR
Trigger: TCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGG...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCACTGGAACACGCGGAAGATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: CMGEDAWRIYWVHWNTRKISFLR*RYTWSE
Trigger: CTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGAT...CTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324155.8
ENST00000381168.7
ENST00000416223.5
CDS-3UTR CCA 90 bp GCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCGTGGCGTAGATCGCCGTGCCTGTACTaGAAGGCGATCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: APAKQRPPGAPRRRAWRRSPCLY*KAISAI
Trigger: GATTGCTGAGATCGCCTTCCAGTACAGGCACGGCGA...TCTACGCCACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGTGTCCAGCTCATCCTaGACACCCTCCAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRVSSSS*TPSRER
Trigger: GCGCTCCCTGGAGGGTGTCCAGGATGAGCTGGACAC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGCCCCGCAGGCGTGCGTaGCGTAGAGGCCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRPRRRA*RRGPSA
Trigger: CGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGG...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp GCAGCAGTCCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTCCCTGCCTGTACTaGAAGGCGATCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: AAVRLRGVHGRGRVADILGPCLY*KAISAI
Trigger: GATTGCTGAGATCGCCTTCCAGTACAGGCAGGGACC...CAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGGACTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS-3UTR TCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGTGCGGGCGTCCTCGATaGGGCTCTGCCTGCGCCCAA +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRCGRPR*GSACAQ
Trigger: TTGGGCGCAGGCAGAGCCTCATCGAGGACGCCCGCA...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGGCCCGAACTCCACCGTaGACCAGTACAGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVARTPP*TSTAWT
Trigger: TGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGC...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGAGACACGAAGTAGACTaGCTGGTACGTCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQRHEVD*LVRLVL
Trigger: CAAGACCAGACGTACCAGTCAGTCTACTTCGTGTCT...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGCTTCCCGGTAGCCGCTaGAGCGCTCCAGCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRLPGSR*SAPAKQ
Trigger: TTGCTTTGCTGGAGCGCTTCAGCGGCTACCGGGAAG...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGTCTGCCTGCGCCCAATaGACCGCGGGGACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRSACAQ*TAGTLG
Trigger: CCCCAAGGTCCCCGCGGTTCATTGGGCGCAGGCAGA...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GTGGTCAGCAGGTCCCTGCCTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCTCAGACACGGCCCTaGGGAAGCCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VVSRSLPVLEGDLSNQLPAQTRP*GSPWPV
Trigger: CACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGC...AGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCAGGGACCTGCTGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS-3UTR GCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGGACATGATGGCCTCTaGCTGCTTGGCGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRGHDGL*LLGVQL
Trigger: GAGCTGGACGCCAAGCAGGCAGAGGCCATCATGTCC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333684.9
ENST00000352909.8
CDS-3UTR GCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGTCCTCGATGAGGCTCTaGCTGCGCCCAATGAACCGC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRSSMRL*LRPMNR
Trigger: GCGGTTCATTGGGCGCAGGCAGAGCCTCATCGAGGA...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCCAGCATGGGCACGTaGCCCAGCAGCTCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRASMGT*PSSSWQ
Trigger: CTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGC...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGCCAGGCCAATGTCCTaGGAGAACTGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRARPMS*ENCAKV
Trigger: CACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GGCACCATAGGCCTTCACCTCCCCGTTCTGCTTACACAGCCCGAACTCCACCGTGCCAGGCCAATGTCCTaGGAGAACTGCGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GTIGLHLPVLLTQPELHRARPMS*ENCAKV
Trigger: CACCTTCGCGCAGTTCTCGCAGGACATTGGCCTGGC...ACGGTGGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAAGGCCTATGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000416223.5
CDS-3UTR CCA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCGGGTCTCTAGATGGTaGATTTTGGCTTCAAACGTC +
Preference number: 4 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRRVSRW*ILASNV
Trigger: GACGTTTGAAGCCAAAATCCACCATCTAGAGACCCG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGACGAAGTACTCCAGGTaGGGGCCCCCAGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRTKYSR*GPPARG
Trigger: GCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCGT...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGACGTCCTCTGACACCTaGCGCACACCACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRTSSDT*RTPLSR
Trigger: CCTGCTCAGTGGTGTGCGCCAGGTGTCAGAGGACGT...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVISFLR*RYTWSE
Trigger: CTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGAT...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGTGTCCAGCACGTCGATaGCCAGCGTGTACGGGTCGA +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRCPARR*PACTGR
Trigger: TCGACCCGTACACGCTGGCCATCGACGTGCTGGACA...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCCACAGGCCGCAGCTaGAAGCCCGTGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRATGRS*KPVRSF
Trigger: GAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGC...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGGCGGTACACCTGGTCCGAGATGGGCGAGGACGCGTaGCGGATATACTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: WKAISAISFLRWRYTWSEMGEDA*RIYWVH
Trigger: GTGCACCCAGTATATCCGCCACGCGTCCTCGCCCAT...CTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGATGGGCGAGGACGCGTaGCGGATATACTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRMGEDA*RIYWVH
Trigger: GTGCACCCAGTATATCCGCCACGCGTCCTCGCCCAT...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp GGCACCATAGGCCTTCACCTCCCCGTTCTGCTTACACAGCCCGAACTCCACCGTATGGGCGAGGACGCGTaGCGGATATACTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GTIGLHLPVLLTQPELHRMGEDA*RIYWVH
Trigger: GTGCACCCAGTATATCCGCCACGCGTCCTCGCCCAT...ACGGTGGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAAGGCCTATGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000416223.5
CDS-3UTR CCA 90 bp GTCCAAGTCCAGGTCAGGGTCGAACTTGGTGACCAGGTGATGACACTTGTCCAGTGCCCCAGCAGCTCGTaGCAGCAGTCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: VQVQVRVELGDQVMTLVQCPSSS*QQSGSG
Trigger: CCCTGAGCCGGACTGCTGCCACGAGCTGCTGGGGCA...CTGGACAAGTGTCATCACCTGGTCACCAAGTTCGACCCTGACCTGGACTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR TCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCTGCGCACGTCCTCTaGCACCTGGCGCACACCACT +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRAAHVL*HLAHTT
Trigger: AGTGGTGTGCGCCAGGTGTCAGAGGACGTGCGCAGC...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp GCCTTCACCTCCCCGTTCTGCTTACACAGCCCGAACTCCACCGTGAACCAGTACGCCCGAACTCCACCGTaGACCAGTACAGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: AFTSPFCLHSPNSTVNQYARTPP*TSTAWT
Trigger: TGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGC...GTACTGGTTCACGGTGGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000416223.5
CDS-3UTR GCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVMMASA*LASSSD
Trigger: GTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCAT...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRMMASA*LASSSD
Trigger: GTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCAT...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGGGCTCCGAGGGGACTaGAGCGGCCGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRGLRGD*SGRCCH
Trigger: GTGGCAGCAGCGGCCGCTGCAGTCCCCTCGGAGCCC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGT +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVQQSAS*AGGTPG
Trigger: ACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTG...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGGGCGGATATACTGGGTaGACTGGAACACGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVGGYTG*TGTRGR
Trigger: CCTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCC...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGGCGGATATACTGGGTaGACTGGAACACGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRGGYTG*TGTRGR
Trigger: CCTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGTGGTGGCGTCGGGGGTaGGCATGGCTCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRWWRRG*AWLSVE
Trigger: CTCCACACTGAGCCATGCCCACCCCCGACGCCACCA...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGACAGCGCCGAGGGCTTaGTGGCCCTCGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRTAPRA*WPSGRR
Trigger: TCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGT...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCGGCCGGGTCTCTAGATaGTGGATTTTGGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGGRVSR*WILASN
Trigger: GTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCC...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGATGGCACTCAGCGCATaGGCAAGGGTGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVMALSA*ARVSSS
Trigger: TGAGCTGGACACCCTTGCCCATGCGCTGAGTGCCAT...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGCGTGCACCTAGCCAATaGCACTCAGCGCATGGGCAA +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRRAPSQ*HSAHGQ
Trigger: TTGCCCATGCGCTGAGTGCCATTGGCTAGGTGCACG...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCGTGCACCTAGCCAATaGCACTCAGCGCATGGGCAA +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVRAPSQ*HSAHGQ
Trigger: TTGCCCATGCGCTGAGTGCCATTGGCTAGGTGCACG...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGAGACCTCCTTCCAGGTaGCAATCTCCTCGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVRPPSR*QSPRRC
Trigger: ACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCT...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGAGAGGCCCTTCAGCGTaGTGTAGACCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRRGPSA*CRPPSR
Trigger: CCTGGAAGGAGGTCTACACCACGCTGAAGGGCCTCT...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGGAGACGTCCTCCAGCTaGGGGATATTGTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVETSSS*GILSSR
Trigger: CCGGGAAGACAATATCCCCCAGCTGGAGGACGTCTC...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp GTAGACCTCCTTCCAGGTGGCAATCTCCTCGGCGGTGTACTCCACACGGGGAATATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: VDLLPGGNLLGGVLHTGNMMASA*LASSSD
Trigger: GTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCAT...ATTCCCCGTGTGGAGTACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR GCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGTTCACCTCCCCGTTCTaGTTACACAGCCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRFTSPF*LHSPNS
Trigger: GGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAA...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGGCGGTACACCTGGGGCGGATATACTGGGTaGACTGGAACACGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LYWKAISAISFLRWRYTWGGYTG*TGTRGR
Trigger: CCTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCC...CCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGCCTTGGCCTGTGGCGTaGTGGCGTCGGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRPWPVA*WRRGWA
Trigger: TGCCCACCCCCGACGCCACCACGCCACAGGCCAAGG...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGCCAGCTCGCGGCCTCTaGGCGGGCCGGGTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRPARGL*AGRVSR
Trigger: TCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGG...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGTCGCCGTGCCTGTACTaGAAGGCGATCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVSPCLY*KAISAI
Trigger: GATTGCTGAGATCGCCTTCCAGTACAGGCACGGCGA...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGTGTCCTTGGCGTCACTaGAGCTCTCAGACACGAAGT +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVCPWRH*SSQTRS
Trigger: ACTTCGTGTCTGAGAGCTTCAGTGACGCCAAGGACA...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGTCTGCCTGCGCCCAATaGACCGCGGGGACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRSACAQ*TAGTLG
Trigger: CCCCAAGGTCCCCGCGGTTCATTGGGCGCAGGCAGA...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGTCCTCGATGAGGCTCTaGCTGCGCCCAATGAACCGC +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRSSMRL*LRPMNR
Trigger: GCGGTTCATTGGGCGCAGGCAGAGCCTCATCGAGGA...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp TACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGGCGGTACACCTGGTCCTTCACCTCCCCGTTCTaGTTACACAGCCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: YWKAISAISFLRWRYTWSFTSPF*LHSPNS
Trigger: GGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAA...GGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR GCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGAAGGGCGGAGGGCAGTaGAGCAGCCCCCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRKGGGQ*SSPQDP
Trigger: AGGGTCCTGGGGGCTGCTGCACTGCCCTCCGCCCTT...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCAAAGGCCTCCAGGTaGTCCCCGCAGGCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRAKASR*SPQACV
Trigger: CACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGAAGCCCTTGGCCTGTaGCGTGGTGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGREALGL*RGGVGG
Trigger: ACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGCCCTGCGGAAGCCCTTaGCCTGTGGCGTGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRPCGSP*PVAWWR
Trigger: ACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGG...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCAGCTTCCTGCGCTGGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGTCGGGTCTCTAGATGGTaGATTTTGGCTTCAAACGTC +
Preference number: 4 (lower is better)
Translates to: SASCAGGTPGPRSPGGPSRVSRW*ILASNV
Trigger: GACGTTTGAAGCCAAAATCCACCATCTAGAGACCCG...ACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGCGCTGGCGGTACACCTaGTCCGAGAAGCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRRWRYT*SEKPGW
Trigger: CCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCG...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGTGTCCAGCACGTCGATaGCCAGCGTGTACGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRCPARR*PACTGR
Trigger: TCGACCCGTACACGCTGGCCATCGACGTGCTGGACA...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCCACAGGCCGCAGCTaGAAGCCCGTGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRATGRS*KPVRSF
Trigger: GAAGGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCGTGGCGGATATACTaGGTGCACTGGAACACGCGG +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRAWRIY*VHWNTR
Trigger: CCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGC...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGTGCCCCAGCAGCTCGTaGCAGCAGTCCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRCPSSS*QQSGSG
Trigger: CCCTGAGCCGGACTGCTGCCACGAGCTGCTGGGGCA...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCTGCGCACGTCCTCTaGCACCTGGCGCACACCACT +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRAAHVL*HLAHTT
Trigger: AGTGGTGTGCGCCAGGTGTCAGAGGACGTGCGCAGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGAGACACGAAGTAGACTaGCTGGTACGTCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRRHEVD*LVRLVL
Trigger: CAAGACCAGACGTACCAGTCAGTCTACTTCGTGTCT...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCTCAGACACGGCCCTaGGGAAGCCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRAQTRP*GSPWPV
Trigger: CACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CACAGCCCGAACTCCACCGTGAACCAGTACAGCGTGGACAGCTTCTCAATTTCCGGCGGATATACTGGGTaGACTGGAACACGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: HSPNSTVNQYSVDSFSISGGYTG*TGTRGR
Trigger: CCTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCC...GGAAATTGAGAAGCTGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000416223.5
CDS-3UTR GCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGTACCATGATGGCCTCTaGCTGCTTGGCGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRYHDGL*LLGVQL
Trigger: GAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTA...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381178.5
CDS-3UTR CCA 90 bp TTACACAGCCCGAACTCCACCGTGAACCAGTACAGCGTGGACAGCTTCTCAATTTGGCCTCTGCCTGCTTaGCGTCCAGCTCAGACACGG +
Preference number: 4 (lower is better)
Translates to: LHSPNSTVNQYSVDSFSIWPLPA*RPAQTR
Trigger: CCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCA...AATTGAGAAGCTGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGCTGTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGGCCGGGTCTCTAGATaGTGGATTTTGGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRGRVSR*WILASN
Trigger: GTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGTATTGTGACGGTGATTaGGGCAGCAGACAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVYCDGD*GSRQCQ
Trigger: CTGACACTGTCTGCTGCCCCAATCACCGTCACAATA...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGAGACCTCCTTCCAGGTaGCAATCTCCTCGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRRPPSR*QSPRRC
Trigger: ACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCT...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGAGAGGCCCTTCAGCGTaGTGTAGACCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRRGPSA*CRPPSR
Trigger: CCTGGAAGGAGGTCTACACCACGCTGAAGGGCCTCT...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGGGGCGCTGGATGCGTaGGGCATAGCTCCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRGALDA*GIAPEL
Trigger: AAGCTCAGGAGCTATGCCTCACGCATCCAGCGCCCC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGTGGCCTCTGCCTGCTTaGCGTCCAGCTCAGACACGG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRWPLPA*RPAQTR
Trigger: CCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCA...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp GTAGCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCCTAGATGGTGGATTTTaGCTTCAAACGTCTCAAACA +
Preference number: 4 (lower is better)
Translates to: VAAEALQQSKGLQVLPAGLDGGF*LQTSQT
Trigger: TGTTTGAGACGTTTGAAGCCAAAATCCACCATCTAG...GCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCCTAGATGGTGGATTTTaGCTTCAAACGTCTCAAACA +
Preference number: 4 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGLDGGF*LQTSQT
Trigger: TGTTTGAGACGTTTGAAGCCAAAATCCACCATCTAG...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CTCCCCGCAGGCGTGCGTGGCGTAGAGGCCCTTCAGCGTGGTGTAGACCTCCTTCTAGATGGTGGATTTTaGCTTCAAACGTCTCAAACA +
Preference number: 4 (lower is better)
Translates to: LPAGVRGVEALQRGVDLLLDGGF*LQTSQT
Trigger: TGTTTGAGACGTTTGAAGCCAAAATCCACCATCTAG...AAGGAGGTCTACACCACGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCGGGTCTCTAGATGGTaGATTTTGGCTTCAAACGTC +
Preference number: 4 (lower is better)
Translates to: IVTVIGAADSVREGRRAVRVSRW*ILASNV
Trigger: GACGTTTGAAGCCAAAATCCACCATCTAGAGACCCG...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp GTAGACCTCCTTCCAGGTGGCAATCTCCTCGGCGGTGTACTCCACACGGGGAATGGCCGGGTCTCTAGATaGTGGATTTTGGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: VDLLPGGNLLGGVLHTGNGRVSR*WILASN
Trigger: GTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCC...ATTCCCCGTGTGGAGTACACCGCCGAGGAGATTGCCACCTGGAAGGAGGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGTCGCCGTGCCTGTACTaGAAGGCGATCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRSPCLY*KAISAI
Trigger: GATTGCTGAGATCGCCTTCCAGTACAGGCACGGCGA...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp ACACAGCCCGAACTCCACCGTGAACCAGTACAGCGTGGACAGCTTCTCAATTTCGAGACGTCCTCCAGCTaGGGGATATTGTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TQPELHREPVQRGQLLNFETSSS*GILSSR
Trigger: CCGGGAAGACAATATCCCCCAGCTGGAGGACGTCTC...GAAATTGAGAAGCTGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS-3UTR CCA 90 bp TTACACAGCCCGAACTCCACCGTGAACCAGTACAGCGTGGACAGCTTCTCAATTGCGTGGCGGATATACTaGGTGCACTGGAACACGCGG +
Preference number: 4 (lower is better)
Translates to: LHSPNSTVNQYSVDSFSIAWRIY*VHWNTR
Trigger: CCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGC...AATTGAGAAGCTGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGCTGTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000416223.5
CDS-3UTR TCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCCCGAACTCCACCGTaGACCAGTACAGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRARTPP*TSTAWT
Trigger: TGTCCACGCTGTACTGGTTCACGGTGGAGTTCGGGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGTCCTCGATGAGGCTCTaGCTGCGCCCAATGAACCGC +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRSSMRL*LRPMNR
Trigger: GCGGTTCATTGGGCGCAGGCAGAGCCTCATCGAGGA...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGACGTCCTCTGACACCTaGCGCACACCACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRTSSDT*RTPLSR
Trigger: CCTGCTCAGTGGTGTGCGCCAGGTGTCAGAGGACGT...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRISFLR*RYTWSE
Trigger: CTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGAT...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGTGGCGGATATACTaGGTGCACTGGAACACGCGG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRAWRIY*VHWNTR
Trigger: CCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGT +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRQQSAS*AGGTPG
Trigger: ACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTG...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGTATTGTGACGGTGATTaGGGCAGCAGACAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SFIVTVIGAADSVREGRRYCDGD*GSRQCQ
Trigger: CTGACACTGTCTGCTGCCCCAATCACCGTCACAATA...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGAGACGTCCTCCAGCTaGGGGATATTGTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRETSSS*GILSSR
Trigger: CCGGGAAGACAATATCCCCCAGCTGGAGGACGTCTC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR GCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGTTCACCTCCCCGTTCTaGTTACACAGCCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRFTSPF*LHSPNS
Trigger: GGAGTTCGGGCTGTGTAAGCAGAACGGGGAGGTGAA...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGCTAGATGGTGGATTTTaGCTTCAAACGTCTCAAACA +
Preference number: 4 (lower is better)
Translates to: STTSPRAHTAVALRSRCRLDGGF*LQTSQT
Trigger: TGTTTGAGACGTTTGAAGCCAAAATCCACCATCTAG...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGTCGCCGTGCCTGTACTaGAAGGCGATCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRSPCLY*KAISAI
Trigger: GATTGCTGAGATCGCCTTCCAGTACAGGCACGGCGA...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR TCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGTGTCCTTGGCGTCACTaGAGCTCTCAGACACGAAGT +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRCPWRH*SSQTRS
Trigger: ACTTCGTGTCTGAGAGCTTCAGTGACGCCAAGGACA...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGGCCGGGTCTCTAGATaGTGGATTTTGGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRGRVSR*WILASN
Trigger: GTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGCGGGTCTCTAGATGGTaGATTTTGGCTTCAAACGTC +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRRVSRW*ILASNV
Trigger: GACGTTTGAAGCCAAAATCCACCATCTAGAGACCCG...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CCA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGCTAGATGGTGGATTTTaGCTTCAAACGTCTCAAACA +
Preference number: 4 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRLDGGF*LQTSQT
Trigger: TGTTTGAGACGTTTGAAGCCAAAATCCACCATCTAG...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS GCA 90 bp GGCTCCCTCCGAGGCCGCGGCGTACCTGCGAGAACTGCGCGAAGGTaGGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCTCGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: GSLRGRGVPARTARR*GRPAWARAPAARGS
Trigger: GCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGTACGCCGCGGCCTCGGAGGGAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461172.1
CDS CCA 90 bp CGCGGCGTACCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATaGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCGGCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: RGVPARTARRCGRPA*ARAPAARGSSPAQG
Trigger: CCCCTGAGCCGGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGTACGCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461172.1
CDS GCA 90 bp GCCACCGCCGCCTCCCGCTCCTTGCGGGCGTCCTCGATGAGGCTCTaGCTGCGCCCAATGAACCGCGGGGACATGATGGCCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ATAASRSLRASSMRL*LRPMNRGDMMASAC
Trigger: GCAGGCAGAGGCCATCATGTCCCCGCGGTTCATTGGGCGCAGGCAGAGCCTCATCGAGGACGCCCGCAAGGAGCGGGAGGCGGCGGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333684.9
ENST00000352909.8
CDS GCA 90 bp CTGGGCCCCGGGGCGCCCTGCCCTCTTACCATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LGPGAPCPLTMMASA*LASSSDTALRKPLA
Trigger: GGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGGGCGCCCCGGGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381178.5
CDS CCA 90 bp CTCCAGGGGTCTCTGGGACACTTCCCTGGCGGCAGAGACCTTCCCTaGCCGCCCAGGATCCGCACCTCCACCGGGCCTCCTCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LQGSLGHFPGGRDLP*PPRIRTSTGPPPPG
Trigger: GCCTGGAGGAGGAGGCCCGGTGGAGGTGCGGATCCTGGGCGGCCAGGGAAGGTCTCTGCCGCCAGGGAAGTGTCCCAGAGACCCCTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461172.1
CDS-3UTR CAA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCCTGCGGAAGCCCTaGGCCTGTGGCGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQALRKP*ACGVVA
Trigger: CGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp CCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCGCCCTGCGGAAGCCCTaGGCCTGTGGCGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: PLKRSSKAKASRCSPQACALRKP*ACGVVA
Trigger: CGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGC...GCACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CAA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCCGCCTCCCGCTCCTaGCGGGCGTCCTCGATGAGG +
Preference number: 5 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQAASRS*RASSMR
Trigger: CCTCATCGAGGACGCCCGCAAGGAGCGGGAGGCGGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGACAGCGCCGAGGGCTaGGTGGCCCTCGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRDSAEG*VALGEK
Trigger: CTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGTC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS GCA 90 bp GAGGCTGGGCCCCGGGGCGCCCTGCCCTCTTACCATGATGGCCTCTaGCTGCTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: EAGPRGALPSYHDGL*LLGVQLRHGPAEAL
Trigger: AAGGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGGGCGCCCCGGGGCCCAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381178.5
CDS CCA 90 bp CTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCCTTGGCCTGTaGCGTGGTGGCGTCGGGGGTGGGCATGGCTCAGTGTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LGVQLRHGPAEALGL*RGGVGGGHGSVWRS
Trigger: GGACCTCCACACTGAGCCATGCCCACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324155.8
ENST00000333684.9
ENST00000352909.8
ENST00000381168.7
ENST00000381175.5
ENST00000381178.5
CDS CCA 90 bp CTGCCTGCTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCCTTaGCCTGTGGCGTGGTGGCGTCGGGGGTGGGCATGGCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LPAWRPAQTRPCGSP*PVAWWRRGWAWLSV
Trigger: CACACTGAGCCATGCCCACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324155.8
ENST00000333684.9
ENST00000352909.8
ENST00000381168.7
ENST00000381175.5
ENST00000381178.5
CDS CCA 90 bp CCTCCAGGGAGCGCCGCACGGCCTGGGGGCTGTCCAGCACGTCGATaGCCAGCGTGTACGGGTCGAACTTCACGGAGAAGGGGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: PPGSAARPGGCPARR*PACTGRTSRRRGAG
Trigger: TCCAGCGCCCCTTCTCCGTGAAGTTCGACCCGTACACGCTGGCCATCGACGTGCTGGACAGCCCCCAGGCCGTGCGGCGCTCCCTGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 90 bp CCAGGTGCTCCCCGCAGGCGTGCGTGGCGTAGAGGCCCTTCAGCGTaGTGTAGACCTCCTTCCTGCGGGCAGCCAGGCTCAGGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: PGAPRRRAWRRGPSA*CRPPSCGQPGSGPS
Trigger: AGAGGGCCCTGAGCCTGGCTGCCCGCAGGAAGGAGGTCTACACCACGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGGAGCACCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479437.5
CDS-3UTR CAA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGACAGCGCCGAGGGCTaGGTGGCCCTCGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQDSAEG*VALGEK
Trigger: CTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGTC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 90 bp GTGTCCAGCTCATCCTGGACACCCTCCAGGGAGCGCCGCACGGCCTaGGGGCTGTCCAGCACGTCGATGGCCAGCGTGTACGGGTCGAAC +
Preference number: 5 (lower is better)
Translates to: VSSSSWTPSRERRTA*GLSSTSMASVYGSN
Trigger: GTTCGACCCGTACACGCTGGCCATCGACGTGCTGGACAGCCCCCAGGCCGTGCGGCGCTCCCTGGAGGGTGTCCAGGATGAGCTGGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCTGGTACGTCTGGTCTaGGTAGGGCTGCACGGCCGC +
Preference number: 5 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRLVRLV*VGLHGR
Trigger: GCGGCCGTGCAGCCCTACCAAGACCAGACGTACCAG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp GCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGGACAGCGCCGAGGGCTaGGTGGCCCTGCCCTCTTAC +
Preference number: 5 (lower is better)
Translates to: AAEALQQSKGLQVLPAGVDSAEG*VALPSY
Trigger: GTAAGAGGGCAGGGCCACCAAGCCCTCGGCGCTGTC...CACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS GCA 90 bp CCGAGGGCTTGGTGGCCCTGCCCTCTTACCATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PRAWWPCPLTMMASA*LASSSDTALRKPLA
Trigger: GGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGGGCCACCAAGCCCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS CCA 90 bp GGCCAATGTCCTGCGAGAACTGCGCGAAGGTGCGGTCGGCCAGCATaGGCACGTGCCCCAGCAGCTCGTGGCAGCAGTCCCAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: GQCPARTARRCGRPA*ARAPAARGSSPRWQ
Trigger: TTGCCACCTGGGACTGCTGCCACGAGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGACATTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333684.9
ENST00000412076.1
CDS-3UTR CAA 90 bp AGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCACTGGAACACGCGGAGCCCTGCGGAAGCCCTaGGCCTGTGGCGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: SAWARTRGGYTGCTGTRGALRKP*ACGVVA
Trigger: CGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGC...TCCGCGTGTTCCAGTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS CCA 90 bp GCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCGTaGCGTAGAGGCCCTTCAGCGTGGTGTAGACCTCCTTCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: APAKQRPPGAPRRRA*RRGPSAWCRPPSCG
Trigger: CCCGCAGGAAGGAGGTCTACACCACGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479437.5
CDS-3UTR CAA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGGCCCTGCGGAAGCCCTaGGCCTGTGGCGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: IVTVIGAADSVREGRRAVALRKP*ACGVVA
Trigger: CGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGC...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGGCCGCCTCCCGCTCCTaGCGGGCGTCCTCGATGAGG +
Preference number: 5 (lower is better)
Translates to: IVTVIGAADSVREGRRAVAASRS*RASSMR
Trigger: CCTCATCGAGGACGCCCGCAAGGAGCGGGAGGCGGC...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCCTGGTACGTCTGGTCTaGGTAGGGCTGCACGGCCGC +
Preference number: 5 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGLVRLV*VGLHGR
Trigger: GCGGCCGTGCAGCCCTACCAAGACCAGACGTACCAG...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS GCA 90 bp AGCCTGCAGGACGGAGTCTGGGTCCCGAGCGCAGGGGCCCCTCACTaGCTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: SLQDGVWVPSAGAPH*LYWKAISAISFLRW
Trigger: CCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCAGTGAGGGGCCCCTGCGCTCGGGACCCAGACTCCGTCCTGCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS CCA 90 bp GGGGAGGTTGGGAAGGGCCCTCAGGGACGCCGTGCACCTAGCCAATaGCACTCAGCGCATGGGCAAGGGTGTCCAGCTCATCCTGGACAC +
Preference number: 5 (lower is better)
Translates to: GEVGKGPQGRRAPSQ*HSAHGQGCPAHPGH
Trigger: GTGTCCAGGATGAGCTGGACACCCTTGCCCATGCGCTGAGTGCCATTGGCTAGGTGCACGGCGTCCCTGAGGGCCCTTCCCAACCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 90 bp GACGGAGTCTGGGTCCCGAGCGCAGGGGCCCCTCACTGCCTGTACTaGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGGCGGTACACC +
Preference number: 5 (lower is better)
Translates to: DGVWVPSAGAPHCLY*KAISAISFLRWRYT
Trigger: GGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCAGTGAGGGGCCCCTGCGCTCGGGACCCAGACTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS-3UTR CAA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGGACAGCGCCGAGGGCTaGGTGGCCCTCGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: STTSPRAHTAVALRSRCRDSAEG*VALGEK
Trigger: CTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGTC...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 90 bp CTTCACTGGGCACAGGTCCACACCCGCCTAGTGCAGCGAGGCCTTTaGGTTGGAGGATGGACAGGAGGGTGCACCCCAGCTGACTGTGCC +
Preference number: 5 (lower is better)
Translates to: LHWAQVHTRLVQRGL*VGGWTGGCTPADCA
Trigger: GGCACAGTCAGCTGGGGTGCACCCTCCTGTCCATCCTCCAACCCAAAGGCCTCGCTGCACTAGGCGGGTGTGGACCTGTGCCCAGTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS-3UTR CAA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGGCTCTGACACTTTTCTaGGGAACCAGGGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRALTLF*GTRGPW
Trigger: CCAAGGTCCCCTGGTTCCCAAGAAAAGTGTCAGAGC...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp TGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCTCCTGAGCTTGTCCTaGGCGTCACTGAAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: WGSRQCQGRAEGSAAAPRLLSLS*ASLKLS
Trigger: TGAGAGCTTCAGTGACGCCAAGGACAAGCTCAGGAG...CCTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 90 bp ACGTCTCAAACACCTTCACAGCTCGGGACAGCGCCGAGGGCTTGGTaGCCCTCGGGGAGAAGAGCAGGTTTAGCACGGCCTTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: TSQTPSQLGTAPRAW*PSGRRAGLARPSPP
Trigger: AGGAGGGGAAGGCCGTGCTAAACCTGCTCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGTCCCGAGCTGTGAAGGTGTTTGAGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCCGCCTCCCGCTCCTaGCGGGCGTCCTCGATGAGG +
Preference number: 5 (lower is better)
Translates to: SFIVTVIGAADSVREGRRAASRS*RASSMR
Trigger: CCTCATCGAGGACGCCCGCAAGGAGCGGGAGGCGGC...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGGCTCTGACACTTTTCTaGGGAACCAGGGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQALTLF*GTRGPW
Trigger: CCAAGGTCCCCTGGTTCCCAAGAAAAGTGTCAGAGC...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCTGGTACGTCTGGTCTaGGTAGGGCTGCACGGCCGC +
Preference number: 5 (lower is better)
Translates to: IVTVIGAADSVREGRRAVLVRLV*VGLHGR
Trigger: GCGGCCGTGCAGCCCTACCAAGACCAGACGTACCAG...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp TTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGCAGCAGCCCCCAGCTCCTGAGCTTGTCCTaGGCGTCACTGAAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: LGQQTVSGKGGGQCSSPQLLSLS*ASLKLS
Trigger: TGAGAGCTTCAGTGACGCCAAGGACAAGCTCAGGAG...CTGGGGGCTGCTGCACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS GCA 90 bp CCCCTCACTGCCTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTaGGCTGGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGT +
Preference number: 5 (lower is better)
Translates to: PLTACTGRRSQQSAS*AGGTPGPRSPGGPS
Trigger: ACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCAGTGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS CCA 90 bp CAAACGTCTCAAACACCTTCACAGCTCGGGACAGCGCCGAGGGCTTaGTGGCCCTCGGGGAGAAGAGCAGGTTTAGCACGGCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: QTSQTPSQLGTAPRA*WPSGRRAGLARPSP
Trigger: AGGGGAAGGCCGTGCTAAACCTGCTCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGTCCCGAGCTGTGAAGGTGTTTGAGACGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 90 bp CACTGCCTGTACTGGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTaGCGGTACACCTGGTCCGAGAAGCCCGGGTGGTCCAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: HCLYWKAISAISFLR*RYTWSEKPGWSKSR
Trigger: CCTGGACTTGGACCACCCGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS-3UTR CAA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGACAGCGCCGAGGGCTaGGTGGCCCTCGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SFIVTVIGAADSVREGRRDSAEG*VALGEK
Trigger: CTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGTC...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp GCTCCAGCAAAGCAAAGGCCTCCAGGTGCTCCCCGCAGGCGTGCGTGGCGTAGAGCTCTGACACTTTTCTaGGGAACCAGGGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: APAKQRPPGAPRRRAWRRALTLF*GTRGPW
Trigger: CCAAGGTCCCCTGGTTCCCAAGAAAAGTGTCAGAGC...TCTACGCCACGCACGCCTGCGGGGAGCACCTGGAGGCCTTTGCTTTGCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CAA 90 bp CCGGCTCAGGGGAGTGCATGGGCGAGGACGCGTGGCGGATATACTGGGTGCACTGCTCTGACACTTTTCTaGGGAACCAGGGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: PAQGSAWARTRGGYTGCTALTLF*GTRGPW
Trigger: CCAAGGTCCCCTGGTTCCCAAGAAAAGTGTCAGAGC...AGTGCACCCAGTATATCCGCCACGCGTCCTCGCCCATGCACTCCCCTGAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CAA 90 bp GTCCAAGTCCAGGTCAGGGTCGAACTTGGTGACCAGGTGATGACACTTGTCCAGGACAGCGCCGAGGGCTaGGTGGCCCATGATGGCCTC +
Preference number: 5 (lower is better)
Translates to: VQVQVRVELGDQVMTLVQDSAEG*VAHDGL
Trigger: GAGGCCATCATGGGCCACCAAGCCCTCGGCGCTGTC...CTGGACAAGTGTCATCACCTGGTCACCAAGTTCGACCCTGACCTGGACTTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS CCA 90 bp CCCACTGGGATTTGGGGACATGGAAAGCCCTGGAGCAGAGCTGCCTaGCAGGAGGCACTGATGCTGGTGACAAGATGGGTCCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: PTGIWGHGKPWSRAA*QEALMLVTRWVLPF
Trigger: AAAGGGGAGGACCCATCTTGTCACCAGCATCAGTGCCTCCTGCCAGGCAGCTCTGCTCCAGGGCTTTCCATGTCCCCAAATCCCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS-3UTR CAA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCCCTGCGGAAGCCCTaGGCCTGTGGCGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRALRKP*ACGVVA
Trigger: CGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCCGCCTCCCGCTCCTaGCGGGCGTCCTCGATGAGG +
Preference number: 5 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRAASRS*RASSMR
Trigger: CCTCATCGAGGACGCCCGCAAGGAGCGGGAGGCGGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGCTGGTACGTCTGGTCTaGGTAGGGCTGCACGGCCGC +
Preference number: 5 (lower is better)
Translates to: SFIVTVIGAADSVREGRRLVRLV*VGLHGR
Trigger: GCGGCCGTGCAGCCCTACCAAGACCAGACGTACCAG...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS TCA 90 bp GAGCTTGTCCTTGGCGTCACTGAAGCTCTCAGACACGAAGTAGACTaGCTGGTACGTCTGGTCTTGGTAGGGCTGCACGGCCGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: ELVLGVTEALRHEVD*LVRLVLVGLHGRSL
Trigger: GAGGCTGCGGCCGTGCAGCCCTACCAAGACCAGACGTACCAGTCAGTCTACTTCGTGTCTGAGAGCTTCAGTGACGCCAAGGACAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGCTCCTGAGCTTGTCCTaGGCGTCACTGAAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: STTSPRAHTAVALRSRCRLLSLS*ASLKLS
Trigger: TGAGAGCTTCAGTGACGCCAAGGACAAGCTCAGGAG...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp ACCCTGGGAGCCAGGACAGGACCTCACCACAGGCAGCACAACCTCACCACGGGCTCTAGATGGTGGATTTaGGCTTCAAACGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TLGARTGPHHRQHNLTTGSRWWI*ASNVSN
Trigger: GTTTGAGACGTTTGAAGCCAAAATCCACCATCTAGA...GCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCTGTCCTGGCTCCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp CCTTCCAGGTGGCAATCTCCTCGGCGGTGTACTCCACACGGGGAATCGGGTCGCTCTAGATGGTGGATTTaGGCTTCAAACGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PSRWQSPRRCTPHGESGRSRWWI*ASNVSN
Trigger: GTTTGAGACGTTTGAAGCCAAAATCCACCATCTAGA...GCGACCCGATTCCCCGTGTGGAGTACACCGCCGAGGAGATTGCCACCTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CAA 90 bp TCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCTCTGACACTTTTCTaGGGAACCAGGGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: SFIVTVIGAADSVREGRRALTLF*GTRGPW
Trigger: CCAAGGTCCCCTGGTTCCCAAGAAAAGTGTCAGAGC...CCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp AGCACAACCTCACCACGGGCACACACAGCTGTTGCGCTGAGAAGCAGGTGCAGGTCTAGATGGTGGATTTaGGCTTCAAACGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: STTSPRAHTAVALRSRCRSRWWI*ASNVSN
Trigger: GTTTGAGACGTTTGAAGCCAAAATCCACCATCTAGA...CCTGCACCTGCTTCTCAGCGCAACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp ATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCGGAGGGCAGTGTCTAGATGGTGGATTTaGGCTTCAAACGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: IVTVIGAADSVREGRRAVSRWWI*ASNVSN
Trigger: GTTTGAGACGTTTGAAGCCAAAATCCACCATCTAGA...CACTGCCCTCCGCCCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS-3UTR CAA 90 bp GGGGATATTGTCTTCCCGGTAGCCGCTGAAGCGCTCCAGCAAAGCAAAGGCCTCTCTAGATGGTGGATTTaGGCTTCAAACGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GDIVFPVAAEALQQSKGLSRWWI*ASNVSN
Trigger: GTTTGAGACGTTTGAAGCCAAAATCCACCATCTAGA...GAGGCCTTTGCTTTGCTGGAGCGCTTCAGCGGCTACCGGGAAGACAATATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324155.8
ENST00000381168.7
CDS-3UTR CAA 90 bp CACAGTTTCTTTTATTGTGACGGTGATTGGGGCAGCAGACAGTGTCAGGGAAGGGCTCTGACACTTTTCTaGGGAACCAGGGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: HSFFYCDGDWGSRQCQGRALTLF*GTRGPW
Trigger: CCAAGGTCCCCTGGTTCCCAAGAAAAGTGTCAGAGC...CCTTCCCTGACACTGTCTGCTGCCCCAATCACCGTCACAATAAAAGAAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS GCA 72 bp CGGCTCCCTCCGAGGCCGCGGCGTACCTGCGAGAACTaGGCGAAGGTGCGGTCGGCCAGCATGGGCACGTGC +
Preference number: 6 (lower is better)
Translates to: RLPPRPRRTCEN*AKVRSASMGTC
Trigger: GCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGTACGCCGCGGCCTCGGAGGGAGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461172.1
CDS CCA 72 bp TCCCGGGCGGACAGCAGGCCGGCCACAGGCCGCAGCTaGAAGCCCGTGCGCTCAGGTGGCAATCTCCTCGGC +
Preference number: 6 (lower is better)
Translates to: SRADSRPATGRS*KPVRSGGNLLG
Trigger: GCCGAGGAGATTGCCACCTGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCTGCTGTCCGCCCGGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416223.5
CDS CAA 72 bp CTGGGCCCCGGGGCGCCCATGATGGCCTCTGCCTGCTaGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: LGPGAPMMASAC*ASSSDTALRKP
Trigger: GGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGGCGCCCCGGGGCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381175.5
CDS GCA 72 bp AGGCTGGGCCCCGGGGCGCCCATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAG +
Preference number: 6 (lower is better)
Translates to: RLGPGAPMMASA*LASSSDTALRK
Trigger: CTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGGCGCCCCGGGGCCCAGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381175.5
CDS GCA 72 bp CGAGGCCGCGGCGTACCTGCGAGAACTGCGCGAAGGTaGGGTCGGCCAGCATGGGCACGTGCCCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: RGRGVPARTARR*GRPAWARAPAA
Trigger: AGCTGCTGGGGCACGTGCCCATGCTGGCCGACCGCACCTTCGCGCAGTTCTCGCAGGTACGCCGCGGCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461172.1
CDS CCA 72 bp TGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCCTTaGCCTGTGGCGTGGTGGCGTCGGGGGTGGGCATGG +
Preference number: 6 (lower is better)
Translates to: WRPAQTRPCGSP*PVAWWRRGWAW
Trigger: CCATGCCCACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324155.8
ENST00000333684.9
ENST00000352909.8
ENST00000381168.7
ENST00000381175.5
ENST00000381178.5
CDS GCA 72 bp CCTCTGCCTGCTTGGCGTCCAGCTCAGACACGGCCCTaGGGAAGCCCTTGGCCTGTGGCGTGGTGGCGTCGG +
Preference number: 6 (lower is better)
Translates to: PLPAWRPAQTRP*GSPWPVAWWRR
Trigger: CCGACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324155.8
ENST00000333684.9
ENST00000352909.8
ENST00000381168.7
ENST00000381175.5
ENST00000381178.5
CDS GCA 72 bp CCCCGGGGCGCCCTGCCCTCTTACCATGATGGCCTCTaGCTGCTTGGCGTCCAGCTCAGACACGGCCCTGCG +
Preference number: 6 (lower is better)
Translates to: PRGALPSYHDGL*LLGVQLRHGPA
Trigger: CGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGGGCGCCCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381178.5
CDS GCA 72 bp GCCTCCCGCTCCTTGCGGGCGTCCTCGATGAGGCTCTaGCTGCGCCCAATGAACCGCGGGGACCTTGGGGTG +
Preference number: 6 (lower is better)
Translates to: ASRSLRASSMRL*LRPMNRGDLGV
Trigger: CACCCCAAGGTCCCCGCGGTTCATTGGGCGCAGGCAGAGCCTCATCGAGGACGCCCGCAAGGAGCGGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381175.5
ENST00000381178.5
CDS CCA 72 bp CAGCTCAGACACGGCCCTGCGGAAGCCCTTGGCCTGTaGCGTGGTGGCGTCGGGGGTGGGCATGGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: QLRHGPAEALGL*RGGVGGGHGSV
Trigger: CACTGAGCCATGCCCACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324155.8
ENST00000333684.9
ENST00000352909.8
ENST00000381168.7
ENST00000381175.5
ENST00000381178.5
CDS CCA 72 bp GCACTCAGCGCATGGGCAAGGGTGTCCAGCTCATCCTaGACACCCTCCAGGGAGCGCCGCACGGCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: ALSAWARVSSSS*TPSRERRTAWG
Trigger: CCCCCAGGCCGTGCGGCGCTCCCTGGAGGGTGTCCAGGATGAGCTGGACACCCTTGCCCATGCGCTGAGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 72 bp GGAAGCCCTTGGCCTGTGGCGTGGTGGCGTCGGGGGTaGGCATGGCTCAGTGTGGAGGTCCGGGCTCCGTCT +
Preference number: 6 (lower is better)
Translates to: GSPWPVAWWRRG*AWLSVEVRAPS
Trigger: AGACGGAGCCCGGACCTCCACACTGAGCCATGCCCACCCCCGACGCCACCACGCCACAGGCCAAGGGCTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352909.8
CDS CAA 90 bp GGCCCCGGGGCGCCCTGCCCTCTTACCATGATGGCCTCTGCCTGCTaGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCCTTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: GPGAPCPLTMMASAC*ASSSDTALRKPLAC
Trigger: ACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGGGCGCCCCGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381178.5
CDS GCA 72 bp GCCTCCCGCTCCTTGCGGGCGTCCTCGATGAGGCTCTaGCTGCGCCCAATGAACCGCGGGGACATGATGGCC +
Preference number: 6 (lower is better)
Translates to: ASRSLRASSMRL*LRPMNRGDMMA
Trigger: GGCCATCATGTCCCCGCGGTTCATTGGGCGCAGGCAGAGCCTCATCGAGGACGCCCGCAAGGAGCGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333684.9
ENST00000352909.8
CDS GCA 72 bp GCGCCGAGGGCTTGGTGGCCCATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAG +
Preference number: 6 (lower is better)
Translates to: APRAWWPMMASA*LASSSDTALRK
Trigger: CTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGGCCACCAAGCCCTCGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS CCA 72 bp TCTCTGGGACACTTCCCTGGCGGCAGAGACCTTCCCTaGCCGCCCAGGATCCGCACCTCCACCGGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: SLGHFPGGRDLP*PPRIRTSTGPP
Trigger: AGGAGGCCCGGTGGAGGTGCGGATCCTGGGCGGCCAGGGAAGGTCTCTGCCGCCAGGGAAGTGTCCCAGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461172.1
CDS CCA 72 bp CCCCGCAGGCGTGCGTGGCGTAGAGGCCCTTCAGCGTaGTGTAGACCTCCTTCCTGCGGGCAGCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: PRRRAWRRGPSA*CRPPSCGQPGS
Trigger: TGAGCCTGGCTGCCCGCAGGAAGGAGGTCTACACCACGCTGAAGGGCCTCTACGCCACGCACGCCTGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479437.5
CDS CAA 72 bp CCGAGGGCTTGGTGGCCCATGATGGCCTCTGCCTGCTaGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: PRAWWPMMASAC*ASSSDTALRKP
Trigger: GGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGGCCACCAAGCCCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324155.8
CDS GCA 72 bp GGGGCGCCCTGCCCTCTTACCATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAG +
Preference number: 6 (lower is better)
Translates to: GAPCPLTMMASA*LASSSDTALRK
Trigger: CTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGGGCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381178.5
CDS CCA 72 bp AGCGCCGCACGGCCTGGGGGCTGTCCAGCACGTCGATaGCCAGCGTGTACGGGTCGAACTTCACGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: SAARPGGCPARR*PACTGRTSRRR
Trigger: CCTTCTCCGTGAAGTTCGACCCGTACACGCTGGCCATCGACGTGCTGGACAGCCCCCAGGCCGTGCGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CAA 72 bp GCGCCCTGCCCTCTTACCATGATGGCCTCTGCCTGCTaGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: APCPLTMMASAC*ASSSDTALRKP
Trigger: GGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381178.5
CDS GCA 72 bp CGCCCAATGAACCGCGGGGACATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAG +
Preference number: 6 (lower is better)
Translates to: RPMNRGDMMASA*LASSSDTALRK
Trigger: CTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGTCCCCGCGGTTCATTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333684.9
ENST00000352909.8
CDS CAA 72 bp CCAATGAACCGCGGGGACATGATGGCCTCTGCCTGCTaGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: PMNRGDMMASAC*ASSSDTALRKP
Trigger: GGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGTCCCCGCGGTTCATTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333684.9
ENST00000352909.8
CDS CAA 72 bp GGCACAGGTCCACACCCGCCTAGTGCAGCGAGGCCTTaGGGTTGGAGGATGGACAGGAGGGTGCACCCCAGC +
Preference number: 6 (lower is better)
Translates to: GTGPHPPSAARP*GWRMDRRVHPS
Trigger: GCTGGGGTGCACCCTCCTGTCCATCCTCCAACCCAAAGGCCTCGCTGCACTAGGCGGGTGTGGACCTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS CAA 90 bp AGGGCTTGGTGGCCCTGCCCTCTTACCATGATGGCCTCTGCCTGCTaGGCGTCCAGCTCAGACACGGCCCTGCGGAAGCCCTTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: RAWWPCPLTMMASAC*ASSSDTALRKPLAC
Trigger: ACAGGCCAAGGGCTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGGGCCACCAAGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS TCA 72 bp GATGGACAGGAGGGTGCACCCCAGCTGACTGTGCCGTaGGCCGGCTATGTGGCCTCGGCAGGTTGCTCTAGC +
Preference number: 6 (lower is better)
Translates to: DGQEGAPQLTVP*AGYVASAGCSS
Trigger: GCTAGAGCAACCTGCCGAGGCCACATAGCCGGCTCACGGCACAGTCAGCTGGGGTGCACCCTCCTGTCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS TCA 72 bp TTGGGTTGGAGGATGGACAGGAGGGTGCACCCCAGCTaGCTGTGCCGTGAGCCGGCTATGTGGCCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: LGWRMDRRVHPS*LCREPAMWPRQ
Trigger: CTGCCGAGGCCACATAGCCGGCTCACGGCACAGTCAGCTGGGGTGCACCCTCCTGTCCATCCTCCAACCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS GCA 72 bp TGGTGGCCCTGCCCTCTTACCATGATGGCCTCTGCCTaGTTGGCGTCCAGCTCAGACACGGCCCTGCGGAAG +
Preference number: 6 (lower is better)
Translates to: WWPCPLTMMASA*LASSSDTALRK
Trigger: CTTCCGCAGGGCCGTGTCTGAGCTGGACGCCAAGCAGGCAGAGGCCATCATGGTAAGAGGGCAGGGCCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381168.7
CDS CCA 72 bp ACACCTTCACAGCTCGGGACAGCGCCGAGGGCTTGGTaGCCCTCGGGGAGAAGAGCAGGTTTAGCACGGCCT +
Preference number: 6 (lower is better)
Translates to: TPSQLGTAPRAW*PSGRRAGLARP
Trigger: AGGCCGTGCTAAACCTGCTCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGTCCCGAGCTGTGAAGGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 72 bp GGGAAGGGCCCTCAGGGACGCCGTGCACCTAGCCAATaGCACTCAGCGCATGGGCAAGGGTGTCCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: GKGPQGRRAPSQ*HSAHGQGCPAH
Trigger: ATGAGCTGGACACCCTTGCCCATGCGCTGAGTGCCATTGGCTAGGTGCACGGCGTCCCTGAGGGCCCTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 72 bp TGGGTCCCGAGCGCAGGGGCCCCTCACTGCCTGTACTaGAAGGCGATCTCAGCAATCAGCTTCCTGCGCTGG +
Preference number: 6 (lower is better)
Translates to: WVPSAGAPHCLY*KAISAISFLRW
Trigger: CCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCAGTGAGGGGCCCCTGCGCTCGGGACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS CCA 72 bp GCACAGGTCCACACCCGCCTAGTGCAGCGAGGCCTTTaGGTTGGAGGATGGACAGGAGGGTGCACCCCAGCT +
Preference number: 6 (lower is better)
Translates to: AQVHTRLVQRGL*VGGWTGGCTPA
Trigger: AGCTGGGGTGCACCCTCCTGTCCATCCTCCAACCCAAAGGCCTCGCTGCACTAGGCGGGTGTGGACCTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS GCA 72 bp GACGGAGTCTGGGTCCCGAGCGCAGGGGCCCCTCACTaGCTGTACTGGAAGGCGATCTCAGCAATCAGCTTC +
Preference number: 6 (lower is better)
Translates to: DGVWVPSAGAPH*LYWKAISAISF
Trigger: GAAGCTGATTGCTGAGATCGCCTTCCAGTACAGGCAGTGAGGGGCCCCTGCGCTCGGGACCCAGACTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS CCA 72 bp CAAACACCTTCACAGCTCGGGACAGCGCCGAGGGCTTaGTGGCCCTCGGGGAGAAGAGCAGGTTTAGCACGG +
Preference number: 6 (lower is better)
Translates to: QTPSQLGTAPRA*WPSGRRAGLAR
Trigger: CCGTGCTAAACCTGCTCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGTCCCGAGCTGTGAAGGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CAA 90 bp TCAAACGTCTCAAACACCTTCACAGCTCGGGACAGCGCCGAGGGCTaGGTGGCCCTCGGGGAGAAGAGCAGGTTTAGCACGGCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: SNVSNTFTARDSAEG*VALGEKSRFSTAFP
Trigger: GGGGAAGGCCGTGCTAAACCTGCTCTTCTCCCCGAGGGCCACCAAGCCCTCGGCGCTGTCCCGAGCTGTGAAGGTGTTTGAGACGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS TCA 72 bp CGGGTCGAACTTCACGGAGAAGGGGCGCTGGATGCGTaGGGCATAGCTCCTGAGCTTGTCCTTGGCGTCACT +
Preference number: 6 (lower is better)
Translates to: RVELHGEGALDA*GIAPELVLGVT
Trigger: AGTGACGCCAAGGACAAGCTCAGGAGCTATGCCTCACGCATCCAGCGCCCCTTCTCCGTGAAGTTCGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CCA 72 bp CCAGCTCGCGGCCTCTGGGCGGGCCGGGTCTCTAGATaGTGGATTTTGGCTTCAAACGTCTCAAACACCTTC +
Preference number: 6 (lower is better)
Translates to: PARGLWAGRVSR*WILASNVSNTF
Trigger: GAAGGTGTTTGAGACGTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324155.8
ENST00000333684.9
ENST00000352909.8
ENST00000381168.7
ENST00000381175.5
ENST00000381178.5
CDS CCA 72 bp GCTCGCGGCCTCTGGGCGGGCCGGGTCTCTAGATGGTaGATTTTGGCTTCAAACGTCTTAGGGAGCAAAAGC +
Preference number: 6 (lower is better)
Translates to: ARGLWAGRVSRW*ILASNVLGSKS
Trigger: GCTTTTGCTCCCTAAGACGTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS CAA 90 bp CCAGCTCGCGGCCTCTGGGCGGGCCGGGTCTCTAGATGGTGGATTTaGGCTTCAAACGTCTTAGGGAGCAAAAGCAGGAAGAGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: PARGLWAGRVSRWWI*ASNVLGSKSRKRER
Trigger: TCTCTCTCTCTTCCTGCTTTTGCTCCCTAAGACGTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS GCA 72 bp TGGGATTTGGGGACATGGAAAGCCCTGGAGCAGAGCTaGCTGGCAGGAGGCACTGATGCTGGTGACAAGATG +
Preference number: 6 (lower is better)
Translates to: WDLGTWKALEQS*LAGGTDAGDKM
Trigger: CATCTTGTCACCAGCATCAGTGCCTCCTGCCAGGCAGCTCTGCTCCAGGGCTTTCCATGTCCCCAAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469226.1
CDS CCA 72 bp GCTCGCGGCCTCTGGGCGGGCCGGGTCTCTAGATGGTaGATTTTGGCTTCAAACGTCTCAAACACCTTCACA +
Preference number: 6 (lower is better)
Translates to: ARGLWAGRVSRW*ILASNVSNTFT
Trigger: TGTGAAGGTGTTTGAGACGTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324155.8
ENST00000333684.9
ENST00000352909.8
ENST00000381168.7
ENST00000381175.5
ENST00000381178.5
CDS CAA 72 bp GGCCTCTGGGCGGGCCGGGTCTCTAGATGGTGGATTTaGGCTTCAAACGTCTCAAACACCTTCACAGCTCGG +
Preference number: 6 (lower is better)
Translates to: GLWAGRVSRWWI*ASNVSNTFTAR
Trigger: CCGAGCTGTGAAGGTGTTTGAGACGTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCCCGCCCAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324155.8
ENST00000333684.9
ENST00000352909.8
ENST00000381168.7
ENST00000381175.5
ENST00000381178.5
CDS TCA 72 bp CTTGGCGTCACTGAAGCTCTCAGACACGAAGTAGACTaGCTGGTACGTCTGGTCTTGGTAGGGCTGCACGGC +
Preference number: 6 (lower is better)
Translates to: LGVTEALRHEVD*LVRLVLVGLHG
Trigger: GCCGTGCAGCCCTACCAAGACCAGACGTACCAGTCAGTCTACTTCGTGTCTGAGAGCTTCAGTGACGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333684.9
ENST00000352909.8
ENST00000381175.5
ENST00000381178.5
CDS CAA 72 bp GGCCTCTGGGCGGGCCGGGTCTCTAGATGGTGGATTTaGGCTTCAAACGTCTTAGGGAGCAAAAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GLWAGRVSRWWI*ASNVLGSKSRK
Trigger: CTTCCTGCTTTTGCTCCCTAAGACGTTTGAAGCCAAAATCCACCATCTAGAGACCCGGCCCGCCCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469226.1