RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137574

Ensembl transcript IDs: ENST00000260129.6, ENST00000519494.1, ENST00000523948.5

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTTGCTTTCCTCATTaGTTCCTCCATTACGTGGTTCACTTTGGCCGGAAGCAGGGCACT +
Preference number: 1 (lower is better)
Translates to: LVGLCLYSPMSCFPH*FLHYVVHFGRKQGT
Trigger: AGTGCCCTGCTTCCGGCCAAAGTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR GCA 90 bp GTGAATCCTCAGCTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTTaGTTTCCTCATTGGTTCCTCCATTACGTGGTTCACTTTGGCCGG +
Preference number: 1 (lower is better)
Translates to: VNPQLVGLCLYSPMS*FPHWFLHYVVHFGR
Trigger: CCGGCCAAAGTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGCTGAGGATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR GCA 90 bp ATCATCAAAACGGGAGAAGAGCCTGTACCTCTGGGCCCAGTATTTTaGCAGCTCAGGAACAGCAGCTATTTCAGGAGGCAGACCATTCAC +
Preference number: 1 (lower is better)
Translates to: IIKTGEEPVPLGPVF*QLRNSSYFRRQTIH
Trigger: GTGAATGGTCTGCCTCCTGAAATAGCTGCTGTTCCTGAGCTGGCAAAATACTGGGCCCAGAGGTACAGGCTCTTCTCCCGTTTTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 90 bp GTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTaGGTCTTCCTCACTTTCATCTCCATCAGTACCACTGGCATGTGG +
Preference number: 1 (lower is better)
Translates to: VQFMAPLQFAWLMLR*VFLTFISISTTGMW
Trigger: CCACATGCCAGTGGTACTGATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 90 bp TTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTaGGTAACACAATCCTGCTCATCTGGAACAGTTGCTAGCAAGCTG +
Preference number: 1 (lower is better)
Translates to: FTSASVSAWRESGTS*VTQSCSSGTVASKL
Trigger: CAGCTTGCTAGCAACTGTTCCAGATGAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 90 bp CCAACTCCACAGAATGCGTCTACTACAACGTCACACTTGAAGGACTaGCTAACACGGCCAGCAATGTGTTCAGCAATCTTCTCGGGTGTA +
Preference number: 1 (lower is better)
Translates to: PTPQNASTTTSHLKD*LTRPAMCSAIFSGV
Trigger: TACACCCGAGAAGATTGCTGAACACATTGCTGGCCGTGTTAGTCAGTCCTTCAAGTGTGACGTTGTAGTAGACGCATTCTGTGGAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 90 bp TCCAACTTAATCCCATCATCAAAACGGGAGAAGAGCCTGTACCTCTaGGCCCAGTATTTTGCCAGCTCAGGAACAGCAGCTATTTCAGGA +
Preference number: 1 (lower is better)
Translates to: SNLIPSSKREKSLYL*AQYFASSGTAAISG
Trigger: TCCTGAAATAGCTGCTGTTCCTGAGCTGGCAAAATACTGGGCCCAGAGGTACAGGCTCTTCTCCCGTTTTGATGATGGGATTAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR GCA 90 bp TCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATaGTCAGGTGGGTCTTCCTCACTTTCATCTCCATCAGTACCACTG +
Preference number: 1 (lower is better)
Translates to: SSMSSSWLLFSLLGL*SGGSSSLSSPSVPL
Trigger: CAGTGGTACTGATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 90 bp GATGAGTTGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACTTTaGCCGGAAGCAGGGCACTCTCTTTTGCTACTAACTTCACTTAGC +
Preference number: 1 (lower is better)
Translates to: DELLSSLVPPLRGSL*PEAGHSLLLLTSLS
Trigger: GCTAAGTGAAGTTAGTAGCAAAAGAGAGTGCCCTGCTTCCGGCCAAAGTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 90 bp TATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATCAGTACCACTaGCATGTGGTCTGTCTTTGCTTGTGTTTGCTCCTGAAGACTTCT +
Preference number: 1 (lower is better)
Translates to: YAQVGLPHFHLHQYH*HVVCLCLCLLLKTS
Trigger: AGAAGTCTTCAGGAGCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 90 bp CTTCTTCTTTTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTaGCACTTCTTGAGTAACACAATCCTGCTCATCTGGAACAGTTGC +
Preference number: 1 (lower is better)
Translates to: LLLFHFSFSFCLAGV*HFLSNTILLIWNSC
Trigger: GCAACTGTTCCAGATGAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAAAAGAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR GCA 90 bp GTTCTTCTTCTTGTTCTTCTTCTTTTTCACTTCAGCTTCAGTTTCTaGCTGGCGGGAGTCTGGCACTTCTTGAGTAACACAATCCTGCTC +
Preference number: 1 (lower is better)
Translates to: VLLLVLLLFHFSFSF*LAGVWHFLSNTILL
Trigger: GAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAAAAGAAGAAGAACAAGAAGAAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 90 bp GTGCAGTTATCCTACCAAATTGAAGTGGCAATCCCATACTTCTCATaGGTTCAGCCTCAGAATCAAGTTCACTTTCATCCAGGCCTATGC +
Preference number: 1 (lower is better)
Translates to: VQLSYQIEVAIPYFS*VQPQNQVHFHPGLC
Trigger: GCATAGGCCTGGATGAAAGTGAACTTGATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACTTCAATTTGGTAGGATAACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR GCA 90 bp ATTGTCTTCAATTTGTTGTTAAGGAAGTTCTGTTCTATTTCCACTTaGCCTCCAGGCCCAGCTAAGGATGCCACCTGGTCAATATCAGCA +
Preference number: 1 (lower is better)
Translates to: IVFNLLLRKFCSIST*PPGPAKDATWSISA
Trigger: TGCTGATATTGACCAGGTGGCATCCTTAGCTGGGCCTGGAGGGCAAGTGGAAATAGAACAGAACTTCCTTAACAACAAATTGAAGACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 90 bp TCTTCCTTTGTATCAGGAAAGTTCCAAGGTTCAGAAGATAGTGCTTaGCCCGGATGTTTTTCTTGCCAACTTTGCCACAATAGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: SSFVSGKFQGSEDSA*PGCFSCQLCHNSPP
Trigger: AGGAGGACTATTGTGGCAAAGTTGGCAAGAAAAACATCCGGGTCAAGCACTATCTTCTGAACCTTGGAACTTTCCTGATACAAAGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 90 bp GTGATCTTCTTAGAAAGTCTCTCATTCCTGTTAAGGCAAACTGAATaGTATTTCCTCCAACTCCACAGAATGCGTCTACTACAACGTCAC +
Preference number: 1 (lower is better)
Translates to: VIFLESLSFLLRQTE*YFLQLHRMRLLQRH
Trigger: GTGACGTTGTAGTAGACGCATTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGGAATGAGAGACTTTCTAAGAAGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 90 bp TGTTCCTCTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATaGGAAGATGATTCCTGTGATGCTTCTTCATCCATTGGTTTATTA +
Preference number: 1 (lower is better)
Translates to: CSSESLLVEASCTLS*EDDSCDASSSIGLL
Trigger: TAATAAACCAATGGATGAAGAAGCATCACAGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAGAGGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 90 bp TTAGACTTAAGCTTCACATTCTTCTCTAAATACCTGACCTGCCGATaGCTGAAATTTGGGATTCCACCATATTTTTGTCCTGAGCCATAC +
Preference number: 1 (lower is better)
Translates to: LDLSFTFFSKYLTCR*LKFGIPPYFCPEPY
Trigger: GTATGGCTCAGGACAAAAATATGGTGGAATCCCAAATTTCAGTCATCGGCAGGTCAGGTATTTAGAGAAGAATGTGAAGCTTAAGTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 90 bp ATTAGTGATCTTCTTAGAAAGTCTCTCATTCCTGTTAAGGCAAACTaGATGGTATTTCCTCCAACTCCACAGAATGCGTCTACTACAACG +
Preference number: 1 (lower is better)
Translates to: ISDLLRKSLIPVKAN*MVFPPTPQNASTTT
Trigger: CGTTGTAGTAGACGCATTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGGAATGAGAGACTTTCTAAGAAGATCACTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 90 bp TTCATAGATACCTCAAAATCCTTATGTGCAGTTATCCTACCAAATTaGAGTGGCAATCCCATACTTCTCATGAGTTCAGCCTCAGAATCA +
Preference number: 1 (lower is better)
Translates to: FIDTSKSLCAVILPN*SGNPILLMSSASES
Trigger: TGATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACTTCAATTTGGTAGGATAACTGCACATAAGGATTTTGAGGTATCTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 90 bp GCTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTTGCTTTCCTCATaGGTTCCTCCATTACGTGGTTCACTTTGGCCGGAAGCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: AGGSVFVFPDELLSS*VPPLRGSLWPEAGH
Trigger: GTGCCCTGCTTCCGGCCAAAGTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR GCA 90 bp CAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTAGTACGGTGTGGCAGTaGCCACCTAAAGCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: QCPVHGSSSVCLAYAQVGSTVWQ*PPKAPA
Trigger: AGCTGGGGCTTTAGGTGGGCACTGCCACACCGTACT...ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CCA 90 bp CAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTGGTTCCTCCATTACGTaGTTCACTTTGGCCGGAAGC +
Preference number: 2 (lower is better)
Translates to: QCPVHGSSSVCLAYAQVGGSSIT*FTLAGS
Trigger: GCTTCCGGCCAAAGTGAACCACGTAATGGAGGAACC...ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 90 bp TGTGAATCCTCAGCTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTaGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACTTTGGCCG +
Preference number: 2 (lower is better)
Translates to: CESSAGGSVFVFPDE*LSSLVPPLRGSLWP
Trigger: CGGCCAAAGTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGCTGAGGATTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CCA 90 bp TTCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGCACTGCACTCCAGCCTaGGCGGTAAAAGTGAGATCC +
Preference number: 2 (lower is better)
Translates to: FINVQFMAPLQFAWLMLRHCTPA*AVKVRS
Trigger: GGATCTCACTTTTACCGCCCAGGCTGGAGTGCAGTG...CCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 90 bp CACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTaGTGTTTGCTCCTGAAGACTTCTGTGAATCCTCAGCTGGTGGGT +
Preference number: 2 (lower is better)
Translates to: HFHLHQYHWHVVCLC*CLLLKTSVNPQLVG
Trigger: ACCCACCAGCTGAGGATTCACAGAAGTCTTCAGGAGCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CCA 90 bp TTCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTTACGTGGTTCACTTTaGCCGGAAGCAGGGCACTCT +
Preference number: 2 (lower is better)
Translates to: FINVQFMAPLQFAWLMLRLRGSL*PEAGHS
Trigger: AGAGTGCCCTGCTTCCGGCCAAAGTGAACCACGTAA...CCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 90 bp TCCTCACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTaGCTTGTGTTTGCTCCTGAAGACTTCTGTGAATCCTCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: SSLSSPSVPLACGLS*LVFAPEDFCESSAG
Trigger: ACCAGCTGAGGATTCACAGAAGTCTTCAGGAGCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR TCA 90 bp CAGCTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCTCAGAAGATAGTGCTTaGCCCGGATGTTTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: QLVGLCLYSPMSCFPHWFSEDSA*PGCFSC
Trigger: GCAAGAAAAACATCCGGGTCAAGCACTATCTTCTGA...GAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR TCA 90 bp TTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTGAGTAACTTCCATTTCATACGGTaGTATAAGACCATGGGTAGA +
Preference number: 2 (lower is better)
Translates to: FHFSFSFCLAGVWHFLSNFHFIR*YKTMGR
Trigger: TCTACCCATGGTCTTATATCACCGTATGAAATGGAA...GTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR TCA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTTACCTGACCTGCCGATaGCTGAAATTTGGGATTCCA +
Preference number: 2 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPYLTCR*LKFGIP
Trigger: TGGAATCCCAAATTTCAGTCATCGGCAGGTCAGGTA...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR GCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACAGTACGGTGTGGCAGTaGCCACCTAAAGCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: SVATVLQSNQINCKLSRHSTVWQ*PPKAPA
Trigger: AGCTGGGGCTTTAGGTGGGCACTGCCACACCGTACT...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR-3UTR CCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAACACTGCACTCCAGCCTaGGCGGTAAAAGTGAGATCC +
Preference number: 2 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKHCTPA*AVKVRS
Trigger: GGATCTCACTTTTACCGCCCAGGCTGGAGTGCAGTG...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR-3UTR CCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAAAGTTTGACACCAGCCTaGGCAACATGGTGGGACCTC +
Preference number: 2 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKSLTPA*ATWWDL
Trigger: GAGGTCCCACCATGTTGCCCAGGCTGGTGTCAAACT...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR CAA 90 bp GCAGCTATTTCAGGAGGCAGACCATTCACCTTTTTGTTCTTCTTCTaGTTCTTCTTCTTTTTCACTTCAGCTTCAGTTTCTGCCTGGCGG +
Preference number: 2 (lower is better)
Translates to: AAISGGRPFTFLFFF*FFFFFTSASVSAWR
Trigger: CCGCCAGGCAGAAACTGAAGCTGAAGTGAAAAAGAAGAAGAACAAGAAGAAGAACAAAAAGGTGAATGGTCTGCCTCCTGAAATAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR GCA 90 bp ACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTTGTGTTTGCTCTGTATCACAGCTTTaGGAGGCATCAAAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: TFISISTTGMWSVFACVCSVSQL*EASKVQ
Trigger: TTGGACTTTTGATGCCTCGCAAAGCTGTGATACAGA...GCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR TCA 90 bp GTCATCAGCTTCTGTTTTAGATGTGTAAGTATCTGTATCACAGCTTTGCGAGGCATTTTGACCACTCCATaGTCTTTTGTCCTCGCACTG +
Preference number: 2 (lower is better)
Translates to: VISFCFRCVSICITALRGILTTP*SFVLAL
Trigger: CAGTGCGAGGACAAAAGATCATGGAGTGGTCAAAAT...GCCTCGCAAAGCTGTGATACAGATACTTACACATCTAAAACAGAAGCTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR TCA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATGTTATCCTACCAAATTaGAGTGGCAATCCCATACTT +
Preference number: 2 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHVILPN*SGNPIL
Trigger: AAGTATGGGATTGCCACTTCAATTTGGTAGGATAAC...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR GCA 90 bp TTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTGAGTAACCTCAAAATCCTTATGTaGAGTTATCCTACCAAATTG +
Preference number: 2 (lower is better)
Translates to: FHFSFSFCLAGVWHFLSNLKILM*SYPTKL
Trigger: CAATTTGGTAGGATAACTGCACATAAGGATTTTGAG...GTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR GCA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTTTTTCTTGCCAACTTTaGCACAATAGTCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPFSCQL*HNSPPP
Trigger: TGGAGGAGGACTATTGTGGCAAAGTTGGCAAGAAAA...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CCA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTTCAATGTCCAGTTCATaGCTCCTCTTCAGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPSMSSS*LLFSLL
Trigger: AAGCAAACTGAAGAGGAGCCATGAACTGGACATTGA...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 90 bp GTCATCAGCTTCTGTTTTAGATGTGTAAGTATCTGTATCACAGCTTaGCGAGGCATCAAAAGTCCAACCCTGAGCTTCCCAATACTGAAA +
Preference number: 2 (lower is better)
Translates to: VISFCFRCVSICITA*RGIKSPTLSFPILK
Trigger: TTTCAGTATTGGGAAGCTCAGGGTTGGACTTTTGATGCCTCGCAAAGCTGTGATACAGATACTTACACATCTAAAACAGAAGCTGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR TCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAAGACAGAAGGATTGCTTaGACTCAGAAGGCTGAACCT +
Preference number: 2 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKDRRIA*TQKAEP
Trigger: AGGTTCAGCCTTCTGAGTTCAAGCAATCCTTCTGTC...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR CAA 90 bp AGCTCAGGAACAGCAGCTATTTCAGGAGGCAGACCATTCACCTTTTaGTTCTTCTTCTTGTTCTTCTTCTTTTTCACTTCAGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: SSGTAAISGGRPFTF*FFFLFFFFFTSASV
Trigger: AACTGAAGCTGAAGTGAAAAAGAAGAAGAACAAGAAGAAGAACAAAAAGGTGAATGGTCTGCCTCCTGAAATAGCTGCTGTTCCTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR TCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACATTTTGACCACTCCATaGTCTTTTGTCCTCGCACTG +
Preference number: 2 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHILTTP*SFVLAL
Trigger: CAGTGCGAGGACAAAAGATCATGGAGTGGTCAAAAT...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR CAA 90 bp ATTCATAGATACCTCAAAATCCTTATGTGCAGTTATCCTACCAAATaGAAGTGGCAATCCCATACTTCTCATGAGTTCAGCCTCAGAATC +
Preference number: 2 (lower is better)
Translates to: IHRYLKILMCSYPTK*KWQSHTSHEFSLRI
Trigger: GATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACTTCAATTTGGTAGGATAACTGCACATAAGGATTTTGAGGTATCTATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 90 bp TTGCGAGGCATCAAAAGTCCAACCCTGAGCTTCCCAATACTGAAATaGTTCCAAATAATACCAATAAAGTTGACTATAATGTTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: LRGIKSPTLSFPILK*FQIIPIKLTIMLLP
Trigger: TGGGAGCAACATTATAGTCAACTTTATTGGTATTATTTGGAACAATTTCAGTATTGGGAAGCTCAGGGTTGGACTTTTGATGCCTCGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAGGTGATATAAGACCATaGGTAGAAAATATCAGTGAA +
Preference number: 2 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLGDIRP*VENISE
Trigger: TTCACTGATATTTTCTACCCATGGTCTTATATCACC...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR-3UTR CCA 90 bp GTCATCAGCTTCTGTTTTAGATGTGTAAGTATCTGTATCACAGCTTTGCGAGGCGGTGATATAAGACCATaGGTAGAAAATATCAGTGAA +
Preference number: 2 (lower is better)
Translates to: VISFCFRCVSICITALRGGDIRP*VENISE
Trigger: TTCACTGATATTTTCTACCCATGGTCTTATATCACC...GCCTCGCAAAGCTGTGATACAGATACTTACACATCTAAAACAGAAGCTGATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 90 bp AATAATACCAATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTaGTATCAGGAAAGTTCCAAGGTTCAGAAGATAGTGCTTGACCCG +
Preference number: 2 (lower is better)
Translates to: NNTNKVDYNVAPILP*YQESSKVQKIVLDP
Trigger: CGGGTCAAGCACTATCTTCTGAACCTTGGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATTGGTATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR TCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACTTCCATTTCATACGGTaGTATAAGACCATGGGTAGA +
Preference number: 2 (lower is better)
Translates to: SVATVLQSNQINCKLSRHFHFIR*YKTMGR
Trigger: TCTACCCATGGTCTTATATCACCGTATGAAATGGAA...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR-3UTR CCA 90 bp AATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTTGTATCAGGAAAGTTCCGAAGTTCATATGTTCTaGTGTTCTCATACTGTTCAA +
Preference number: 2 (lower is better)
Translates to: NKVDYNVAPILPLYQESSEVHMF*CSHTVQ
Trigger: TTGAACAGTATGAGAACACCAGAACATATGAACTTC...GGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp GCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTaGGTAACACAATCCTGCTCATCTGGAACAGTTGCT +
Preference number: 3 (lower is better)
Translates to: ASVSAWRESGTS*VTQSCSSGTVA
Trigger: AGCAACTGTTCCAGATGAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR GCA 72 bp CAGCTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTTaGTTTCCTCATTGGTTCCTCCATTACGTGGTTCAC +
Preference number: 3 (lower is better)
Translates to: QLVGLCLYSPMS*FPHWFLHYVVH
Trigger: GTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 72 bp GTGGGTCTTCCTCACTTTCATCTCCATCAGTACCACTaGCATGTGGTCTGTCTTTGCTTGTGTTTGCTCCTG +
Preference number: 3 (lower is better)
Translates to: VGLPHFHLHQYH*HVVCLCLCLLL
Trigger: CAGGAGCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGTGAGGAAGACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 72 bp TTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTaGCACTTCTTGAGTAACACAATCCTGCTCATCTGG +
Preference number: 3 (lower is better)
Translates to: FHFSFSFCLAGV*HFLSNTILLIW
Trigger: CCAGATGAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp GCCAGCAATGTGTTCAGCAATCTTCTCGGGTGTAACTaGAAACCAGCCCTCTCTGTCCAACTTAATCCCATC +
Preference number: 3 (lower is better)
Translates to: ASNVFSNLLGCN*KPALSVQLNPI
Trigger: GATGGGATTAAGTTGGACAGAGAGGGCTGGTTTTCAGTTACACCCGAGAAGATTGCTGAACACATTGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR GCA 72 bp TCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATaGTCAGGTGGGTCTTCCTCACTTTCATCTCCATCA +
Preference number: 3 (lower is better)
Translates to: SSSWLLFSLLGL*SGGSSSLSSPS
Trigger: TGATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 72 bp CTTTCCTCATTGGTTCCTCCATTACGTGGTTCACTTTaGCCGGAAGCAGGGCACTCTCTTTTGCTACTAACT +
Preference number: 3 (lower is better)
Translates to: LSSLVPPLRGSL*PEAGHSLLLLT
Trigger: AGTTAGTAGCAAAAGAGAGTGCCCTGCTTCCGGCCAAAGTGAACCACGTAATGGAGGAACCAATGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 72 bp CTGTGTTTGTATTCCCCGATGAGTTGCTTTCCTCATTaGTTCCTCCATTACGTGGTTCACTTTGGCCGGAAG +
Preference number: 3 (lower is better)
Translates to: LCLYSPMSCFPH*FLHYVVHFGRK
Trigger: CTTCCGGCCAAAGTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 72 bp ATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTaGGTCTTCCTCACTTTCATCTCCATCAGTACCACT +
Preference number: 3 (lower is better)
Translates to: MAPLQFAWLMLR*VFLTFISISTT
Trigger: AGTGGTACTGATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATGTATTCCCCGATGAGTaGCTTTCCTCATTGGTTCCT +
Preference number: 3 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHVFPDE*LSSLVP
Trigger: AGGAACCAATGAGGAAAGCAACTCATCGGGGAATAC...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp CAGAATGCGTCTACTACAACGTCACACTTGAAGGACTaGCTAACACGGCCAGCAATGTGTTCAGCAATCTTC +
Preference number: 3 (lower is better)
Translates to: QNASTTTSHLKD*LTRPAMCSAIF
Trigger: GAAGATTGCTGAACACATTGCTGGCCGTGTTAGTCAGTCCTTCAAGTGTGACGTTGTAGTAGACGCATTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTACCACTCCATGATCTTTaGTCCTCGCACTGCTGCATA +
Preference number: 3 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLPLHDL*SSHCCI
Trigger: TATGCAGCAGTGCGAGGACAAAAGATCATGGAGTGG...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR-3UTR CAA 90 bp TTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTGAGTAACAGTTATCCTACCAAATaGAAGTGGCAATCCCATACT +
Preference number: 3 (lower is better)
Translates to: FHFSFSFCLAGVWHFLSNSYPTK*KWQSHT
Trigger: AGTATGGGATTGCCACTTCAATTTGGTAGGATAACT...GTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp TTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACATCTGTATCACAGCTTaGCGAGGCATCAAAAGTCCA +
Preference number: 3 (lower is better)
Translates to: LYSPMSCFPHWFLHYVVHICITA*RGIKSP
Trigger: TGGACTTTTGATGCCTCGCAAAGCTGTGATACAGAT...GTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTGAGTTGCTTTCCTCATaGGTTCCTCCATTACGTGGT +
Preference number: 3 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPELLSS*VPPLRG
Trigger: ACCACGTAATGGAGGAACCAATGAGGAAAGCAACTC...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR GCA 72 bp GGCAAACTGAATGGTATTTCCTCCAACTCCACAGAATaGGTCTACTACAACGTCACACTTGAAGGACTGACT +
Preference number: 3 (lower is better)
Translates to: GKLNGISSNSTE*VYYNVTLEGLT
Trigger: AGTCAGTCCTTCAAGTGTGACGTTGTAGTAGACGCATTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTCCACTCCATGATCTTTaGTCCTCGCACTGCTGCATA +
Preference number: 3 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVPLHDL*SSHCCI
Trigger: TATGCAGCAGTGCGAGGACAAAAGATCATGGAGTGG...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp TTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTGAGTAACGGTTTTTCTGACTCTTaGGTAAAGAAGATGTGTTTG +
Preference number: 3 (lower is better)
Translates to: FHFSFSFCLAGVWHFLSNGFSDS*VKKMCL
Trigger: CAAACACATCTTCTTTACCAAAGAGTCAGAAAAACC...GTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp GTATCAGGAAAGTTCCAAGGTTCAGAAGATAGTGCTTaGCCCGGATGTTTTTCTTGCCAACTTTGCCACAAT +
Preference number: 3 (lower is better)
Translates to: VSGKFQGSEDSA*PGCFSCQLCHN
Trigger: ATTGTGGCAAAGTTGGCAAGAAAAACATCCGGGTCAAGCACTATCTTCTGAACCTTGGAACTTTCCTGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp GAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATaGGAAGATGATTCCTGTGATGCTTCTTCATCCATT +
Preference number: 3 (lower is better)
Translates to: ESLLVEASCTLS*EDDSCDASSSI
Trigger: AATGGATGAAGAAGCATCACAGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp ACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTTGTGTTTGCTCTCATACTGTTCAATaGAAGATGGATCATCTGAAG +
Preference number: 3 (lower is better)
Translates to: TFISISTTGMWSVFACVCSHTVQ*KMDHLK
Trigger: CTTCAGATGATCCATCTTCAATTGAACAGTATGAGA...GCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTGCTCCCATTCTTCCTTaGTATCAGGAAAGTTCCAAG +
Preference number: 3 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVAPILP*YQESSK
Trigger: CTTGGAACTTTCCTGATACAAAGGAAGAATGGGAGC...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp TTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACAAGTTGACTATAATGTaGCTCCCATTCTTCCTTTGT +
Preference number: 3 (lower is better)
Translates to: LYSPMSCFPHWFLHYVVHKLTIM*LPFFLC
Trigger: ACAAAGGAAGAATGGGAGCAACATTATAGTCAACTT...GTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp TCCTACCAAATTGAAGTGGCAATCCCATACTTCTCATaGGTTCAGCCTCAGAATCAAGTTCACTTTCATCCA +
Preference number: 3 (lower is better)
Translates to: SYQIEVAIPYFS*VQPQNQVHFHP
Trigger: TGGATGAAAGTGAACTTGATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACTTCAATTTGGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp ACCTCAAAATCCTTATGTGCAGTTATCCTACCAAATTaGAGTGGCAATCCCATACTTCTCATGAGTTCAGCC +
Preference number: 3 (lower is better)
Translates to: TSKSLCAVILPN*SGNPILLMSSA
Trigger: GGCTGAACTCATGAGAAGTATGGGATTGCCACTTCAATTTGGTAGGATAACTGCACATAAGGATTTTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp CTTCTTAGAAAGTCTCTCATTCCTGTTAAGGCAAACTaGATGGTATTTCCTCCAACTCCACAGAATGCGTCT +
Preference number: 3 (lower is better)
Translates to: LLRKSLIPVKAN*MVFPPTPQNAS
Trigger: AGACGCATTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGGAATGAGAGACTTTCTAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR-3UTR CAA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTGATGACCATCATGACTaGTACAGGAATCTAATTGGC +
Preference number: 3 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVDDHHD*YRNLIG
Trigger: GCCAATTAGATTCCTGTACAAGTCATGATGGTCATC...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp AGCTTCACATTCTTCTCTAAATACCTGACCTGCCGATaGCTGAAATTTGGGATTCCACCATATTTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: SFTFFSKYLTCR*LKFGIPPYFCP
Trigger: AGGACAAAAATATGGTGGAATCCCAAATTTCAGTCATCGGCAGGTCAGGTATTTAGAGAAGAATGTGAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR TCA 72 bp TTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTaGCACTTTTCAGGTTCTGGATTATTAGTCTCCAGT +
Preference number: 3 (lower is better)
Translates to: FSVSSSPAEDTL*HFSGSGLLVSS
Trigger: ACTGGAGACTAATAATCCAGAACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CCA 72 bp TTAGAAAGTCTCTCATTCCTGTTAAGGCAAACTGAATaGTATTTCCTCCAACTCCACAGAATGCGTCTACTA +
Preference number: 3 (lower is better)
Translates to: LESLSFLLRQTE*YFLQLHRMRLL
Trigger: TAGTAGACGCATTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGGAATGAGAGACTTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGCTTCGGAGGCAGCTCTaGCGTACGCAGCCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: FINVQFMAPLQFAWLMLRLRRQL*RTQPGS
Trigger: CGACCCGGGCTGCGTACGTCAGAGCTGCCTCCGAAG...CCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGCCCGCAAGCCCTGGATaGGGAGATAGAAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: FINVQFMAPLQFAWLMLRPASPG*GDRNWP
Trigger: GGGCCAGTTTCTATCTCCTCATCCAGGGCTTGCGGG...CCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACAGCCCGGGTCGCGCCTaGCGGGCCTCCGCTCGGTTA +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHSPGRA*RASARL
Trigger: TAACCGAGCGGAGGCCCGGCAGGCGCGACCCGGGCT...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp AATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTTGTATCAGGAAAGTTCCAGCCCGGGTCGCGCCTaGCGGGCCTCCGCTCGGTTA +
Preference number: 4 (lower is better)
Translates to: NKVDYNVAPILPLYQESSSPGRA*RASARL
Trigger: TAACCGAGCGGAGGCCCGGCAGGCGCGACCCGGGCT...GGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTGAGTAACCCTCCGCTCGGTTACTaGAGACTTAAAACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: FHFSFSFCLAGVWHFLSNPPLGY*RLKTGL
Trigger: GAGGCCTGTTTTAAGTCTCCAGTAACCGAGCGGAGG...GTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 72 bp AGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTaGAGTAACACAATCCTGCTCATCTGGAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: SFSFCLAGVWHF*SNTILLIWNSC
Trigger: GCAACTGTTCCAGATGAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACCTTCGGAGGCAGCTCTaGCGTACGCAGCCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHLRRQL*RTQPGS
Trigger: CGACCCGGGCTGCGTACGTCAGAGCTGCCTCCGAAG...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTGAGTAACCCAGGCCTATGCCTTTaGTGTCATGTGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FHFSFSFCLAGVWHFLSNPGLCL*CHVILQ
Trigger: CTGCAGAATCACATGACAGCAAAGGCATAGGCCTGG...GTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp CAGCTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCTGTTCTATTTCCACTTaGCCTCCAGGCCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: QLVGLCLYSPMSCFPHWFCSIST*PPGPAK
Trigger: CTTAGCTGGGCCTGGAGGGCAAGTGGAAATAGAACA...GAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp ACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTTGTGTTTGCAGTTTGACACCAGCCTaGGCAACATGGTGGGACCTC +
Preference number: 4 (lower is better)
Translates to: TFISISTTGMWSVFACVCSLTPA*ATWWDL
Trigger: GAGGTCCCACCATGTTGCCCAGGCTGGTGTCAAACT...GCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 72 bp GCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACTTaGGCCGGAAGCAGGGCACTCTCTTTTGCTACTAAC +
Preference number: 4 (lower is better)
Translates to: AFLIGSSITWFT*AGSRALSFATN
Trigger: GTTAGTAGCAAAAGAGAGTGCCCTGCTTCCGGCCAAAGTGAACCACGTAATGGAGGAACCAATGAGGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp CAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTTACCTGACCTGCCGATaGCTGAAATTTGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: QCPVHGSSSVCLAYAQVGYLTCR*LKFGIP
Trigger: TGGAATCCCAAATTTCAGTCATCGGCAGGTCAGGTA...ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp CAGCTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCGACAGAAGGATTGCTTaGACTCAGAAGGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: QLVGLCLYSPMSCFPHWFDRRIA*TQKAEP
Trigger: AGGTTCAGCCTTCTGAGTTCAAGCAATCCTTCTGTC...GAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp CCTACCAAATTGAAGTGGCAATCCCATACTTCTCATGAGTTCAGCCTCAGAATCCTGGGCCCAGTATTTTaGCAGCTCAGGAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTKLKWQSHTSHEFSLRILGPVF*QLRNSS
Trigger: GCTGCTGTTCCTGAGCTGGCAAAATACTGGGCCCAG...GATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACTTCAATTTGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp TTCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTGGTCTCTCCACAAATaGCCTGGAGCAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: FINVQFMAPLQFAWLMLRWSLHK*PGAKAQ
Trigger: CTGTGCCTTTGCTCCAGGGCATTTGTGGAGAGACCA...CCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATTTACGTGGTTCACTTTaGCCGGAAGCAGGGCACTCT +
Preference number: 4 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHLRGSL*PEAGHS
Trigger: AGAGTGCCCTGCTTCCGGCCAAAGTGAACCACGTAA...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACGGTTCCTCCATTACGTaGTTCACTTTGGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LYSPMSCFPHWFLHYVVHGSSIT*FTLAGS
Trigger: GCTTCCGGCCAAAGTGAACCACGTAATGGAGGAACC...GTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTATGGCCCTCCCCAAGGTaGGCTGAGGAACACAACATC +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLWPSPR*AEEHNI
Trigger: GATGTTGTGTTCCTCAGCCCACCTTGGGGAGGGCCA...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR CAA 72 bp CTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTaGTGTTTGCTCCTGAAGACTTCTGTGAATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LHQYHWHVVCLC*CLLLKTSVNPQ
Trigger: CTGAGGATTCACAGAAGTCTTCAGGAGCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAACCCGCAAGCCCTGGATaGGGAGATAGAAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKPASPG*GDRNWP
Trigger: GGGCCAGTTTCTATCTCCTCATCCAGGGCTTGCGGG...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATGTCCTGAGCCATACTTaGATCCTAGAAGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHVLSHT*ILEGNH
Trigger: GTGGTTCCCTTCTAGGATTCAAGTATGGCTCAGGAC...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATTCACACTTGAAGGACTaGCTAACACGGCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHSHLKD*LTRPAM
Trigger: CATTGCTGGCCGTGTTAGTCAGTCCTTCAAGTGTGA...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTGAGTAACATTTTGACCACTCCATaGTCTTTTGTCCTCGCACTG +
Preference number: 4 (lower is better)
Translates to: FHFSFSFCLAGVWHFLSNILTTP*SFVLAL
Trigger: CAGTGCGAGGACAAAAGATCATGGAGTGGTCAAAAT...GTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATGGCTCCTCTTCAGTTTaGTTGGCTTATGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHGSSSV*LAYAQV
Trigger: CACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCC...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp CAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTTTGTCCTCGCACTaGTGCATAGTTAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: QCPVHGSSSVCLAYAQVGLLSSH*CIVRFQ
Trigger: CTGAAACCTAACTATGCAGCAGTGCGAGGACAAAAG...ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TTCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGCTCCATCAGTACCACTaGCATGTGGTCTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: FINVQFMAPLQFAWLMLRLHQYH*HVVCLC
Trigger: GCAAAGACAGACCACATGCCAGTGGTACTGATGGAG...CCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp AGTGGCAATCCCATACTTCTCATGAGTTCAGCCTCAGAATCAAGTTCACTTTCAGCTTCAGTTTCTGCCTaGCGGGAGTCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SGNPILLMSSASESSSLSASVSA*RESGTS
Trigger: AGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGC...TGAAAGTGAACTTGATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATGCAGTGGCATAGTCTaGCCCTCCCCAAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKCSGIV*PSPRWA
Trigger: AGCCCACCTTGGGGAGGGCCAGACTATGCCACTGCA...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp GTCATCAGCTTCTGTTTTAGATGTGTAAGTATCTGTATCACAGCTTTGCGAGGCCACTGCACTCCAGCCTaGGCGGTAAAAGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: VISFCFRCVSICITALRGHCTPA*AVKVRS
Trigger: GGATCTCACTTTTACCGCCCAGGCTGGAGTGCAGTG...GCCTCGCAAAGCTGTGATACAGATACTTACACATCTAAAACAGAAGCTGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTTCACTTCAGCTTCAGTTTCTGCCTGGCGGGAGTCTGGCACTTCTTGAGTAACATCCCATACTTCTCATaGGTTCAGCCTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: FHFSFSFCLAGVWHFLSNIPYFS*VQPQNQ
Trigger: TTGATTCTGAGGCTGAACTCATGAGAAGTATGGGAT...GTTACTCAAGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAAGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTACTTCTCGGGTGTAACTaGAAACCAGCCCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLLLGCN*KPALSV
Trigger: GACAGAGAGGGCTGGTTTTCAGTTACACCCGAGAAG...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTATCGATCCTCCACAAATaGCCTGGAGCAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLSILHK*PGAKAQ
Trigger: CTGTGCCTTTGCTCCAGGGCATTTGTGGAGGATCGA...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp CAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTTTTTCTTGCCAACTTTaGCACAATAGTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QCPVHGSSSVCLAYAQVGFSCQL*HNSPPP
Trigger: TGGAGGAGGACTATTGTGGCAAAGTTGGCAAGAAAA...ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp ACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTTGTGTTTGCAGTTTGCTTGGCTTATaGTCAGGTGGGTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TFISISTTGMWSVFACVCSLLGL*SGGSSS
Trigger: TGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACT...GCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTTTCAGCTTCAGTTTCTaGCTGGCGGGAGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVFSFSF*LAGVWH
Trigger: GTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAA...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp TTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACTTGTCCTCGCACTGCTaGATAGTTAGGTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LYSPMSCFPHWFLHYVVHLSSHC*IVRFQR
Trigger: CCTCTGAAACCTAACTATGCAGCAGTGCGAGGACAA...GTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAAAGTACGGTGTGGCAGTaGCCACCTAAAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKSTVWQ*PPKAPA
Trigger: AGCTGGGGCTTTAGGTGGGCACTGCCACACCGTACT...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTACCTCCGCTCGGTTACTaGAGACTTAAAACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLPPLGY*RLKTGL
Trigger: GAGGCCTGTTTTAAGTCTCCAGTAACCGAGCGGAGG...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp GTCATCAGCTTCTGTTTTAGATGTGTAAGTATCTGTATCACAGCTTTGCGAGGCTGCCTGGCGGGAGTCTaGCACTTCTTGAGTAACACA +
Preference number: 4 (lower is better)
Translates to: VISFCFRCVSICITALRGCLAGV*HFLSNT
Trigger: TGTGTTACTCAAGAAGTGCCAGACTCCCGCCAGGCA...GCCTCGCAAAGCTGTGATACAGATACTTACACATCTAAAACAGAAGCTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp CAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTGCTAAGGATGCCACCTaGTCAATATCAGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: QCPVHGSSSVCLAYAQVGAKDAT*SISAFL
Trigger: AAGAAATGCTGATATTGACCAGGTGGCATCCTTAGC...ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 72 bp TCTGTGTTTGTATTCCCCGATGAGTTGCTTTCCTCATaGGTTCCTCCATTACGTGGTTCACTTTGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: SVFVFPDELLSS*VPPLRGSLWPE
Trigger: TTCCGGCCAAAGTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 72 bp AAGACTTCTGTGAATCCTCAGCTGGTGGGTCTGTGTTaGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTC +
Preference number: 4 (lower is better)
Translates to: KTSVNPQLVGLC*YSPMSCFPHWF
Trigger: GAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGCTGAGGATTCACAGAAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTGCTGAAGATACGCTCTaGCACTTTTCAGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPAEDTL*HFSGSG
Trigger: TCCAGAACCTGAAAAGTGTCAGAGCGTATCTTCAGC...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTATCACACTTGAAGGACTaGCTAACACGGCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLSHLKD*LTRPAM
Trigger: CATTGCTGGCCGTGTTAGTCAGTCCTTCAAGTGTGA...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACCTCCCCAAGGTGGGCTaGGGAACACAACATCAGCCT +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHLPKVG*GTQHQP
Trigger: AGGCTGATGTTGTGTTCCTCAGCCCACCTTGGGGAG...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTACCAGGCCTATGCCTTTaGTGTCATGTGATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLPGLCL*CHVILQ
Trigger: CTGCAGAATCACATGACAGCAAAGGCATAGGCCTGG...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAGGCTCCTCTTCAGTTTaGTTGGCTTATGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLGSSSV*LAYAQV
Trigger: CACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCC...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTCAGCTTCAGTTTCTaGCTGGCGGGAGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKFSFSF*LAGVWH
Trigger: GTGCCAGACTCCCGCCAGGCAGAAACTGAAGCTGAA...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp ACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTTGTGTTTGCTCCAACTCCACAGAATaGGTCTACTACAACGTCACA +
Preference number: 4 (lower is better)
Translates to: TFISISTTGMWSVFACVCSNSTE*VYYNVT
Trigger: TGTGACGTTGTAGTAGACGCATTCTGTGGAGTTGGA...GCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAAATGTCAAAGGTCTCTaGAGTGGCATAGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLNVKGL*SGIVWP
Trigger: GGGCCAGACTATGCCACTGCAGAGACCTTTGACATT...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATAGTACCACTGGCATGTaGTCTGTCTTTGCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHSTTGM*SVFACV
Trigger: AACACAAGCAAAGACAGACCACATGCCAGTGGTACT...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACCAAAGGTCTCTGCAGTaGCATAGTCTGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHQRSLQ*HSLALP
Trigger: GGGGAGGGCCAGACTATGCCACTGCAGAGACCTTTG...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTATACCTGACCTGCCGATaGCTGAAATTTGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLYLTCR*LKFGIP
Trigger: TGGAATCCCAAATTTCAGTCATCGGCAGGTCAGGTA...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACCTGGGCCCAGTATTTTaGCAGCTCAGGAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHLGPVF*QLRNSS
Trigger: GCTGCTGTTCCTGAGCTGGCAAAATACTGGGCCCAG...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp AATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTTGTATCAGGAAAGTTCCAGTACGGTGTGGCAGTaGCCACCTAAAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: NKVDYNVAPILPLYQESSSTVWQ*PPKAPA
Trigger: AGCTGGGGCTTTAGGTGGGCACTGCCACACCGTACT...GGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTATCTTCTTCTGTCGCCTaGTCTCCTGAATTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLSSSVA*SPELLP
Trigger: TGGCAACAATTCAGGAGACCAGGCGACAGAAGAAGA...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTACGTGGTTCACTTTaGCCGGAAGCAGGGCACTCT +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKLRGSL*PEAGHS
Trigger: AGAGTGCCCTGCTTCCGGCCAAAGTGAACCACGTAA...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACAGTTGCTTTCCTCATTaGTTCCTCCATTACGTGGTT +
Preference number: 4 (lower is better)
Translates to: LYSPMSCFPHWFLHYVVHSCFPH*FLHYVV
Trigger: AACCACGTAATGGAGGAACCAATGAGGAAAGCAACT...GTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp ACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTTGTGTTTGCTCAATGTCCAGTTCATaGCTCCTCTTCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TFISISTTGMWSVFACVCSMSSS*LLFSLL
Trigger: AAGCAAACTGAAGAGGAGCCATGAACTGGACATTGA...GCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp CAGCTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCTGCTTCTTCATCCATTaGTTTATTAACCCATGTGAG +
Preference number: 4 (lower is better)
Translates to: QLVGLCLYSPMSCFPHWFCFFIH*FINPCE
Trigger: CTCACATGGGTTAATAAACCAATGGATGAAGAAGCA...GAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACGCTTCAGTTTCTGCCTaGCGGGAGTCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHASVSA*RESGTS
Trigger: AGAAGTGCCAGACTCCCGCCAGGCAGAAACTGAAGC...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACAGTTTGACACCAGCCTaGGCAACATGGTGGGACCTC +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHSLTPA*ATWWDL
Trigger: GAGGTCCCACCATGTTGCCCAGGCTGGTGTCAAACT...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACCCTCCCGCTCCTCAATaGAGAGAAACATTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHPPAPQ*RETFPP
Trigger: TGGCGGAAATGTTTCTCTTCATTGAGGAGCGGGAGG...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACTGTCGCCTGGTCTCCTaGATTGTTGCCACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHCRLVS*IVATVS
Trigger: AGAGACAGTGGCAACAATTCAGGAGACCAGGCGACA...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAAGTCCTGAGCCATACTTaGATCCTAGAAGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKVLSHT*ILEGNH
Trigger: GTGGTTCCCTTCTAGGATTCAAGTATGGCTCAGGAC...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp CCTACCAAATTGAAGTGGCAATCCCATACTTCTCATGAGTTCAGCCTCAGAATCTCGTGCACATTGTCATaGGAAGATGATTCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PTKLKWQSHTSHEFSLRISCTLS*EDDSCD
Trigger: ATCACAGGAATCATCTTCTCATGACAATGTGCACGA...GATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACTTCAATTTGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp AGTGGCAATCCCATACTTCTCATGAGTTCAGCCTCAGAATCAAGTTCACTTTCACATGTCTTGTTCCTCTaGATCACTACTTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SGNPILLMSSASESSSLSHVLFL*ITTCGS
Trigger: GCTTCCACAAGTAGTGATTCAGAGGAACAAGACATG...TGAAAGTGAACTTGATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTGAGTCTGGCACTTCTTaGGTAACACAATCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVESGTS*VTQSCS
Trigger: TGAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTC...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTTTTCATCCAGGCCTATaGCTTTGCTGTCATGTGATT +
Preference number: 4 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPFHPGL*LCCHVI
Trigger: AATCACATGACAGCAAAGGCATAGGCCTGGATGAAA...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTCCCGGATGTTTTTCTTaGCAACTTTGCCACAATAGT +
Preference number: 4 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPPGCFS*QLCHNS
Trigger: ACTATTGTGGCAAAGTTGGCAAGAAAAACATCCGGG...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTATCCAACTCCACAGAATaGGTCTACTACAACGTCACA +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLSNSTE*VYYNVT
Trigger: TGTGACGTTGTAGTAGACGCATTCTGTGGAGTTGGA...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATGTTCTATTTCCACTTaGCCTCCAGGCCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKCSIST*PPGPAK
Trigger: CTTAGCTGGGCCTGGAGGGCAAGTGGAAATAGAACA...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTATGCCTTTACTTCACCTaGCATCTCCCTAGTGACTTT +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLCLYFT*HLPSDF
Trigger: AAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCA...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGGTTCCTCCATTACGTaGTTCACTTTGGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHGSSIT*FTLAGS
Trigger: GCTTCCGGCCAAAGTGAACCACGTAATGGAGGAACC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACTGCCTGGCGGGAGTCTaGCACTTCTTGAGTAACACA +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHCLAGV*HFLSNT
Trigger: TGTGTTACTCAAGAAGTGCCAGACTCCCGCCAGGCA...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATTTAAGGCAAACTGAATaGTATTTCCTCCAACTCCAC +
Preference number: 4 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHLRQTE*YFLQLH
Trigger: GTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAA...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp CAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTGGTGATATAAGACCATaGGTAGAAAATATCAGTGAA +
Preference number: 4 (lower is better)
Translates to: QCPVHGSSSVCLAYAQVGGDIRP*VENISE
Trigger: TTCACTGATATTTTCTACCCATGGTCTTATATCACC...ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTTCTCCACAAATGCCCTaGAGCAAAGGCACAGTATCT +
Preference number: 4 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVSPQMP*SKGTVS
Trigger: AGATACTGTGCCTTTGCTCCAGGGCATTTGTGGAGA...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 72 bp TTCTGTTTTAGATGTGTAAGTATCTGTATCACAGCTTaGCGAGGCATCAAAAGTCCAACCCTGAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FCFRCVSICITA*RGIKSPTLSFP
Trigger: TGGGAAGCTCAGGGTTGGACTTTTGATGCCTCGCAAAGCTGTGATACAGATACTTACACATCTAAAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTGTTATCCTACCAAATTaGAGTGGCAATCCCATACTT +
Preference number: 4 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPVILPN*SGNPIL
Trigger: AAGTATGGGATTGCCACTTCAATTTGGTAGGATAAC...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAAGCTGAAGATACGCTCTaGCACTTTTCAGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKAEDTL*HFSGSG
Trigger: TCCAGAACCTGAAAAGTGTCAGAGCGTATCTTCAGC...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTTTCAAGTTCACCAGCTaGAGATACGCTCTGACACTT +
Preference number: 4 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVFKFTS*RYALTL
Trigger: AAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAA...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp AATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTTGTATCAGGAAAGTTCCCTTCTCGGGTGTAACTaGAAACCAGCCCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: NKVDYNVAPILPLYQESSLLGCN*KPALSV
Trigger: GACAGAGAGGGCTGGTTTTCAGTTACACCCGAGAAG...GGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAAGTTTTATCCCTGTGTaGTTAGTGGGCAGCAATATC +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLSFIPV*LVGSNI
Trigger: GATATTGCTGCCCACTAATCACACAGGGATAAAACT...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTACCCGGATGTTTTTCTTaGCAACTTTGCCACAATAGT +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLPGCFS*QLCHNS
Trigger: ACTATTGTGGCAAAGTTGGCAAGAAAAACATCCGGG...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACCCTCCACAAATGCCCTaGAGCAAAGGCACAGTATCT +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHPPQMP*SKGTVS
Trigger: AGATACTGTGCCTTTGCTCCAGGGCATTTGTGGAGG...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAAGTTGCTTTCCTCATTaGTTCCTCCATTACGTGGTT +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLSCFPH*FLHYVV
Trigger: AACCACGTAATGGAGGAACCAATGAGGAAAGCAACT...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACCTCCATCAGTACCACTaGCATGTGGTCTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHLHQYH*HVVCLC
Trigger: GCAAAGACAGACCACATGCCAGTGGTACTGATGGAG...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAGCTAAGGATGCCACCTaGTCAATATCAGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLAKDAT*SISAFL
Trigger: AAGAAATGCTGATATTGACCAGGTGGCATCCTTAGC...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAACATGTCTTGTTCCTCTaGATCACTACTTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKHVLFL*ITTCGS
Trigger: GCTTCCACAAGTAGTGATTCAGAGGAACAAGACATG...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACGAGTCTGGCACTTCTTaGGTAACACAATCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHESGTS*VTQSCS
Trigger: TGAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTC...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTATTCCATTTCATACGGTaGTATAAGACCATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLFHFIR*YKTMGR
Trigger: TCTACCCATGGTCTTATATCACCGTATGAAATGGAA...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGACAGAAGGATTGCTTaGACTCAGAAGGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHDRRIA*TQKAEP
Trigger: AGGTTCAGCCTTCTGAGTTCAAGCAATCCTTCTGTC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACAGTTTGCTTGGCTTATaGTCAGGTGGGTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHSLLGL*SGGSSS
Trigger: TGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACT...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTTGTCCTCGCACTGCTaGATAGTTAGGTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHLSSHC*IVRFQR
Trigger: CCTCTGAAACCTAACTATGCAGCAGTGCGAGGACAA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAACTTTTGTCCTCGCACTaGTGCATAGTTAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKLLSSH*CIVRFQ
Trigger: CTGAAACCTAACTATGCAGCAGTGCGAGGACAAAAG...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAGTGATTTTGGAAATCTaGCTTTACTTCACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLVILEI*LYFTCH
Trigger: ATGGCAGGTGAAGTAAAGGCAGATTTCCAAAATCAC...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp AGTGGCAATCCCATACTTCTCATGAGTTCAGCCTCAGAATCAAGTTCACTTTCAGTACAGGAATCTAATTaGCTCTGTGTTACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SGNPILLMSSASESSSLSVQESN*LCVTSS
Trigger: AGAGGAAGTAACACAGAGCCAATTAGATTCCTGTAC...TGAAAGTGAACTTGATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp CGAATTAGGTCACCAAAATATGCAGTGATTGTCTTCAATTTGTTGTTAAGGAAGTCTTCTTCTGTCGCCTaGTCTCTCCACAAATGCCCT +
Preference number: 4 (lower is better)
Translates to: RIRSPKYAVIVFNLLLRKSSSVA*SLHKCP
Trigger: AGGGCATTTGTGGAGAGACCAGGCGACAGAAGAAGA...CTTCCTTAACAACAAATTGAAGACAATCACTGCATATTTTGGTGACCTAATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTCAGAAGATAGTGCTTaGCCCGGATGTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHSEDSA*PGCFSC
Trigger: GCAAGAAAAACATCCGGGTCAAGCACTATCTTCTGA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATCGTGCACATTGTCATaGGAAGATGATTCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKSCTLS*EDDSCD
Trigger: ATCACAGGAATCATCTTCTCATGACAATGTGCACGA...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTTCAAGTTCACCAGCTaGAGATACGCTCTGACACTT +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHFKFTS*RYALTL
Trigger: AAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACATTTTGACCACTCCATaGTCTTTTGTCCTCGCACTG +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHILTTP*SFVLAL
Trigger: CAGTGCGAGGACAAAAGATCATGGAGTGGTCAAAAT...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTTTCCATTTCATACGGTaGTATAAGACCATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVFHFIR*YKTMGR
Trigger: TCTACCCATGGTCTTATATCACCGTATGAAATGGAA...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACAGTACCACTGGCATGTaGTCTGTCTTTGCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHSTTGM*SVFACV
Trigger: AACACAAGCAAAGACAGACCACATGCCAGTGGTACT...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACCTGAATCACTACTTGTaGAAGCGTCGTGCACATTGT +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHLNHYL*KRRAHC
Trigger: ACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR CAA 72 bp TACCTCAAAATCCTTATGTGCAGTTATCCTACCAAATaGAAGTGGCAATCCCATACTTCTCATGAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: YLKILMCSYPTK*KWQSHTSHEFS
Trigger: GCTGAACTCATGAGAAGTATGGGATTGCCACTTCAATTTGGTAGGATAACTGCACATAAGGATTTTGAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATGTTGCCACTGTCTCTaGTGTAATAGCCTTTTAATC +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKCCHCL*CNSLLI
Trigger: GATTAAAAGGCTATTACATCAGAGACAGTGGCAACA...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACATCCCATACTTCTCATaGGTTCAGCCTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHIPYFS*VQPQNQ
Trigger: TTGATTCTGAGGCTGAACTCATGAGAAGTATGGGAT...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp AATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTTGTATCAGGAAAGTTCCTCAGAAGATAGTGCTTaGCCCGGATGTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: NKVDYNVAPILPLYQESSSEDSA*PGCFSC
Trigger: GCAAGAAAAACATCCGGGTCAAGCACTATCTTCTGA...GGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACCCTGTTAAGGCAAACTaGATGGTATTTCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHPVKAN*MVFPPT
Trigger: AGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGG...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTTTCATCCAGGCCTATaGCTTTGCTGTCATGTGATT +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHFHPGL*LCCHVI
Trigger: AATCACATGACAGCAAAGGCATAGGCCTGGATGAAA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTTTTCTTGCCAACTTTaGCACAATAGTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHFSCQL*HNSPPP
Trigger: TGGAGGAGGACTATTGTGGCAAAGTTGGCAAGAAAA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTCTGTATCACAGCTTTaGGAGGCATCAAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHSVSQL*EASKVQ
Trigger: TTGGACTTTTGATGCCTCGCAAAGCTGTGATACAGA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTATCCCATAAACTTCTaGATTATTGCGAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHYPINF*IIASKG
Trigger: GCCCTTGCTCGCAATAATGCAGAAGTTTATGGGATA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAGAAGTTCATATGTTCTaGTGTTCTCATACTGTTCAA +
Preference number: 4 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLEVHMF*CSHTVQ
Trigger: TTGAACAGTATGAGAACACCAGAACATATGAACTTC...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTCAATGTCCAGTTCATaGCTCCTCTTCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHSMSSS*LLFSLL
Trigger: AAGCAAACTGAAGAGGAGCCATGAACTGGACATTGA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp AATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTTGTATCAGGAAAGTTCCCTGAATCACTACTTGTaGAAGCGTCGTGCACATTGT +
Preference number: 4 (lower is better)
Translates to: NKVDYNVAPILPLYQESSLNHYL*KRRAHC
Trigger: ACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG...GGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACCAGGATCGATATCAATaGCAATCACTCTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHQDRYQ*QSLSFL
Trigger: CAGGAATGAGAGTGATTGCCATTGATATCGATCCTG...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAAAGGTCTAACCTTCAATaGACAAGTGTTGTATGTCAC +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKRSNLQ*TSVVCH
Trigger: GTGACATACAACACTTGTCCATTGAAGGTTAGACCT...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR CAA 72 bp TCAGGAGGCAGACCATTCACCTTTTTGTTCTTCTTCTaGTTCTTCTTCTTTTTCACTTCAGCTTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGGRPFTFLFFF*FFFFFTSASVS
Trigger: AGAAACTGAAGCTGAAGTGAAAAAGAAGAAGAACAAGAAGAAGAACAAAAAGGTGAATGGTCTGCCTCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523948.5
3UTR CAA 72 bp ACAGCAGCTATTTCAGGAGGCAGACCATTCACCTTTTaGTTCTTCTTCTTGTTCTTCTTCTTTTTCACTTCA +
Preference number: 4 (lower is better)
Translates to: TAAISGGRPFTF*FFFLFFFFFTS
Trigger: TGAAGTGAAAAAGAAGAAGAACAAGAAGAAGAACAAAAAGGTGAATGGTCTGCCTCCTGAAATAGCTGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGTTATCCTACCAAATTaGAGTGGCAATCCCATACTT +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHVILPN*SGNPIL
Trigger: AAGTATGGGATTGCCACTTCAATTTGGTAGGATAAC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACACTGTCATCAAAGTCTaGAGCTGGGTTTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHTVIKV*SWVFIN
Trigger: ATTGATGAAAACCCAGCTTCAGACTTTGATGACAGT...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR TCA 90 bp CGAATTAGGTCACCAAAATATGCAGTGATTGTCTTCAATTTGTTGTTAAGGAAGCCTGTTAAGGCAAACTaGATGGTATTTCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: RIRSPKYAVIVFNLLLRKPVKAN*MVFPPT
Trigger: AGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGG...CTTCCTTAACAACAAATTGAAGACAATCACTGCATATTTTGGTGACCTAATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR GCA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTCTCAAAATCCTTATGTaGAGTTATCCTACCAAATTG +
Preference number: 4 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVLKILM*SYPTKL
Trigger: CAATTTGGTAGGATAACTGCACATAAGGATTTTGAG...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACGTACAGGAATCTAATTaGCTCTGTGTTACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHVQESN*LCVTSS
Trigger: AGAGGAAGTAACACAGAGCCAATTAGATTCCTGTAC...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTTAAGGCAAACTGAATaGTATTTCCTCCAACTCCAC +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHLRQTE*YFLQLH
Trigger: GTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
3UTR CAA 72 bp GAAGTTCATATGTTCTGGTGTTCTCATACTGTTCAATaGAAGATGGATCATCTGAAGCCAAAATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: EVHMFWCSHTVQ*KMDHLKPKCRL
Trigger: AAGACGACATTTTGGCTTCAGATGATCCATCTTCAATTGAACAGTATGAGAACACCAGAACATATGAACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR TCA 90 bp AATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTTGTATCAGGAAAGTTCCACTGTCATCAAAGTCTaGAGCTGGGTTTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: NKVDYNVAPILPLYQESSTVIKV*SWVFIN
Trigger: ATTGATGAAAACCCAGCTTCAGACTTTGATGACAGT...GGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACCCGATGACTGAAATTTaGGATTCCACCATATTTTTG +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHPMTEI*DSTIFL
Trigger: CAAAAATATGGTGGAATCCCAAATTTCAGTCATCGG...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTGCTTCTTCATCCATTaGTTTATTAACCCATGTGAG +
Preference number: 4 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHCFFIH*FINPCE
Trigger: CTCACATGGGTTAATAAACCAATGGATGAAGAAGCA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAAGGTGATATAAGACCATaGGTAGAAAATATCAGTGAA +
Preference number: 4 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKGDIRP*VENISE
Trigger: TTCACTGATATTTTCTACCCATGGTCTTATATCACC...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR GCA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACCTCAAAATCCTTATGTaGAGTTATCCTACCAAATTG +
Preference number: 4 (lower is better)
Translates to: SVATVLQSNQINCKLSRHLKILM*SYPTKL
Trigger: CAATTTGGTAGGATAACTGCACATAAGGATTTTGAG...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CCA 90 bp AATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTTGTATCAGGAAAGTTCCCCGATGACTGAAATTTaGGATTCCACCATATTTTTG +
Preference number: 4 (lower is better)
Translates to: NKVDYNVAPILPLYQESSPMTEI*DSTIFL
Trigger: CAAAAATATGGTGGAATCCCAAATTTCAGTCATCGG...GGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS TCA 90 bp CGGCTCCACTTCTCGCAGCACATTTTACCACTTCGGAGGCAGCTCTaGCGTACGCAGCCCGGGTCGCGCCTGCCGGGCCTCCGCTCGGTT +
Preference number: 5 (lower is better)
Translates to: RLHFSQHILPLRRQL*RTQPGSRLPGLRSV
Trigger: AACCGAGCGGAGGCCCGGCAGGCGCGACCCGGGCTGCGTACGTCAGAGCTGCCTCCGAAGTGGTAAAATGTGCTGCGAGAAGTGGAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260129.6
ENST00000523948.5
CDS CCA 90 bp ACGTACGCAGCCCGGGTCGCGCCTGCCGGGCCTCCGCTCGGTTACTaGAGACTTAAAACAGGCCTCGCCCGCAAGCCCTGGATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: TYAARVAPAGPPLGY*RLKTGLARKPWMRR
Trigger: TCTCCTCATCCAGGGCTTGCGGGCGAGGCCTGTTTTAAGTCTCCAGTAACCGAGCGGAGGCCCGGCAGGCGCGACCCGGGCTGCGTACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260129.6
ENST00000523948.5
CDS TCA 90 bp CCCTGGAGCAAAGGCACAGTATCTTACAATCCTCCCGCTCCTCAATaGAGAGAAACATTTCCGCCACGCGGCTCCACTTCTCGCAGCACA +
Preference number: 5 (lower is better)
Translates to: PWSKGTVSYNPPAPQ*RETFPPRGSTSRST
Trigger: TGTGCTGCGAGAAGTGGAGCCGCGTGGCGGAAATGTTTCTCTTCATTGAGGAGCGGGAGGATTGTAAGATACTGTGCCTTTGCTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260129.6
ENST00000523948.5
CDS GCA 90 bp TTCAAAGCCATCAGGAGACATCATTGTTCTAATGTCAAAGGTCTCTaGAGTGGCATAGTCTGGCCCTCCCCAAGGTGGGCTGAGGAACAC +
Preference number: 5 (lower is better)
Translates to: FKAIRRHHCSNVKGL*SGIVWPSPRWAEEH
Trigger: GTGTTCCTCAGCCCACCTTGGGGAGGGCCAGACTATGCCACTGCAGAGACCTTTGACATTAGAACAATGATGTCTCCTGATGGCTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp CAGCTGGTGGGTCTGTGTTTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCGCTCCCATTCTTCCTTaGTATCAGGAAAGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: QLVGLCLYSPMSCFPHWFAPILP*YQESSK
Trigger: CTTGGAACTTTCCTGATACAAAGGAAGAATGGGAGC...GAACCAATGAGGAAAGCAACTCATCGGGGAATACAAACACAGACCCACCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACTCCTCTTCAGTTTGCTaGGCTTATGCTCAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LYSPMSCFPHWFLHYVVHSSSVC*AYAQVG
Trigger: ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGA...GTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACCCTCTGAATCACTACTaGTGGAAGCGTCGTGCACAT +
Preference number: 5 (lower is better)
Translates to: LYSPMSCFPHWFLHYVVHPLNHY*WKRRAH
Trigger: ATGTGCACGACGCTTCCACAAGTAGTGATTCAGAGG...GTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TTGTATTCCCCGATGAGTTGCTTTCCTCATTGGTTCCTCCATTACGTGGTTCACGGAGTCTGGCACTTCTaGAGTAACACAATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LYSPMSCFPHWFLHYVVHGVWHF*SNTILL
Trigger: GAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTCC...GTGAACCACGTAATGGAGGAACCAATGAGGAAAGCAACTCATCGGGGAATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS GCA 90 bp GTTCAGCCTCAGAATCAAGTTCACTTTCATCCAGGCCTATGCCTTTaGTGTCATGTGATTCTGCAGTACCACAGGAATAACCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: VQPQNQVHFHPGLCL*CHVILQYHRNNHLP
Trigger: AGGAAGGTGGTTATTCCTGTGGTACTGCAGAATCACATGACAGCAAAGGCATAGGCCTGGATGAAAGTGAACTTGATTCTGAGGCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260129.6
ENST00000523948.5
CDS-3UTR CAA 90 bp TTCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGGCAGGGCACTCTCTTTaGCTACTAACTTCACTTAGC +
Preference number: 5 (lower is better)
Translates to: FINVQFMAPLQFAWLMLRAGHSL*LLTSLS
Trigger: GCTAAGTGAAGTTAGTAGCAAAAGAGAGTGCCCTGC...CCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATGAGTTGCTTTCCTCATaGGTTCCTCCATTACGTGGT +
Preference number: 5 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHELLSS*VPPLRG
Trigger: ACCACGTAATGGAGGAACCAATGAGGAAAGCAACTC...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TTCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGGCTCATCTGGAACAGTaGCTAGCAAGCTGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: FINVQFMAPLQFAWLMLRAHLEQ*LASCLF
Trigger: AAAGAGACAGCTTGCTAGCAACTGTTCCAGATGAGC...CCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTCTTCCTCACTTTCATCTCCATATCTGTATCACAGCTTaGCGAGGCATCAAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: SSVCLAYAQVGLPHFHLHICITA*RGIKSP
Trigger: TGGACTTTTGATGCCTCGCAAAGCTGTGATACAGAT...ATGGAGATGAAAGTGAGGAAGACCCACCTGAGCATAAGCCAAGCAAACTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTGTGGTCTGTCTTTGCTaGTGTTTGCTCCTGAAGACT +
Preference number: 5 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPVVCLC*CLLLKT
Trigger: AGTCTTCAGGAGCAAACACAAGCAAAGACAGACCAC...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp CTGAATCACTACTTGTGGAAGCGTCGTGCACATTGTCATGAGAAGATGATTCCTTGTCCTGAGCCATACTaGAATCCTAGAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: LNHYLWKRRAHCHEKMIPCPEPY*NPRREP
Trigger: TGGTTCCCTTCTAGGATTCAAGTATGGCTCAGGACA...AGGAATCATCTTCTCATGACAATGTGCACGACGCTTCCACAAGTAGTGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAAGCCTGGTCTCCTGAATaGTTGCCACTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKAWSPE*LPLSLM
Trigger: CATCAGAGACAGTGGCAACAATTCAGGAGACCAGGC...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAGTATTCCCCGATGAGTaGCTTTCCTCATTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLVFPDE*LSSLVP
Trigger: AGGAACCAATGAGGAAAGCAACTCATCGGGGAATAC...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp CAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTGGGTGGTTTTTCTGACTCTTaGGTAAAGAAGATGTGTTTG +
Preference number: 5 (lower is better)
Translates to: QCPVHGSSSVCLAYAQVGGFSDS*VKKMCL
Trigger: CAAACACATCTTCTTTACCAAAGAGTCAGAAAAACC...ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS TCA 90 bp GGATCGATATCAATGGCAATCACTCTCATTCCTGTTAAGGCAAACTaGATGGTATTTCCTCCAACTCCACAGAATGCGTCTACTACAACG +
Preference number: 5 (lower is better)
Translates to: GSISMAITLIPVKAN*MVFPPTPQNASTTT
Trigger: CGTTGTAGTAGACGCATTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGGAATGAGAGTGATTGCCATTGATATCGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS CCA 90 bp CGATATCAATGGCAATCACTCTCATTCCTGTTAAGGCAAACTGAATaGTATTTCCTCCAACTCCACAGAATGCGTCTACTACAACGTCAC +
Preference number: 5 (lower is better)
Translates to: RYQWQSLSFLLRQTE*YFLQLHRMRLLQRH
Trigger: GTGACGTTGTAGTAGACGCATTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGGAATGAGAGTGATTGCCATTGATATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATCCAGGCCTATGCCTTaGCTGTCATGTGATTCTGCA +
Preference number: 5 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKSRPMP*LSCDSA
Trigger: TGCAGAATCACATGACAGCAAAGGCATAGGCCTGGA...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp AGTTTTCTGTTTCAAGTTCACCAGCTGAAGATACGCTCTGACACTTTTCAGGTTGTATTCCCCGATGAGTaGCTTTCCTCATTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SFLFQVHQLKIRSDTFQVVFPDE*LSSLVP
Trigger: AGGAACCAATGAGGAAAGCAACTCATCGGGGAATAC...AACCTGAAAAGTGTCAGAGCGTATCTTCAGCTGGTGAACTTGAAACAGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS GCA 90 bp AGAAGCCAGCAGCAAGAAATCTCCACAGATGAACTCTATCTTATCTaGTATCCCATAAACTTCTGCATTATTGCGAGCAAGGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: RSQQQEISTDELYLI*YPINFCIIASKGNL
Trigger: AAGATTGCCCTTGCTCGCAATAATGCAGAAGTTTATGGGATAGCAGATAAGATAGAGTTCATCTGTGGAGATTTCTTGCTGCTGGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTCATCAATGTCCAGTTCATGGCTCCTCTTCAGTTTGCTTGGCTTATGCTCAGGTCTCATACTGTTCAATaGAAGATGGATCATCTGAAG +
Preference number: 5 (lower is better)
Translates to: FINVQFMAPLQFAWLMLRSHTVQ*KMDHLK
Trigger: CTTCAGATGATCCATCTTCAATTGAACAGTATGAGA...CCTGAGCATAAGCCAAGCAAACTGAAGAGGAGCCATGAACTGGACATTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACTCCTCTTCAGTTTGCTaGGCTTATGCTCAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: SVATVLQSNQINCKLSRHSSSVC*AYAQVG
Trigger: ACCCACCTGAGCATAAGCCAAGCAAACTGAAGAGGA...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACCCTCTGAATCACTACTaGTGGAAGCGTCGTGCACAT +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHPLNHY*WKRRAH
Trigger: ATGTGCACGACGCTTCCACAAGTAGTGATTCAGAGG...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGGAGTCTGGCACTTCTaGAGTAACACAATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHGVWHF*SNTILL
Trigger: GAGCAGGATTGTGTTACTCAAGAAGTGCCAGACTCC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp AATAAAGTTGACTATAATGTTGCTCCCATTCTTCCTTTGTATCAGGAAAGTTCCTCCAGGCCTATGCCTTaGCTGTCATGTGATTCTGCA +
Preference number: 5 (lower is better)
Translates to: NKVDYNVAPILPLYQESSSRPMP*LSCDSA
Trigger: TGCAGAATCACATGACAGCAAAGGCATAGGCCTGGA...GGAACTTTCCTGATACAAAGGAAGAATGGGAGCAACATTATAGTCAACTTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp CCTACCAAATTGAAGTGGCAATCCCATACTTCTCATGAGTTCAGCCTCAGAATCAAGTTGACTATAATGTaGCTCCCATTCTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: PTKLKWQSHTSHEFSLRIKLTIM*LPFFLC
Trigger: ACAAAGGAAGAATGGGAGCAACATTATAGTCAACTT...GATTCTGAGGCTGAACTCATGAGAAGTATGGGATTGCCACTTCAATTTGGTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAAATCTGTATCACAGCTTaGCGAGGCATCAAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKICITA*RGIKSP
Trigger: TGGACTTTTGATGCCTCGCAAAGCTGTGATACAGAT...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACGCAGGGCACTCTCTTTaGCTACTAACTTCACTTAGC +
Preference number: 5 (lower is better)
Translates to: SVATVLQSNQINCKLSRHAGHSL*LLTSLS
Trigger: GCTAAGTGAAGTTAGTAGCAAAAGAGAGTGCCCTGC...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGAGTTGCTTTCCTCATaGGTTCCTCCATTACGTGGT +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHELLSS*VPPLRG
Trigger: ACCACGTAATGGAGGAACCAATGAGGAAAGCAACTC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGTGGTCTGTCTTTGCTaGTGTTTGCTCCTGAAGACT +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHVVCLC*CLLLKT
Trigger: AGTCTTCAGGAGCAAACACAAGCAAAGACAGACCAC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACTGTCCTGAGCCATACTaGAATCCTAGAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHCPEPY*NPRREP
Trigger: TGGTTCCCTTCTAGGATTCAAGTATGGCTCAGGACA...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGCTCATCTGGAACAGTaGCTAGCAAGCTGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHAHLEQ*LASCLF
Trigger: AAAGAGACAGCTTGCTAGCAACTGTTCCAGATGAGC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp CGAATTAGGTCACCAAAATATGCAGTGATTGTCTTCAATTTGTTGTTAAGGAAGCCACTCCATGATCTTTaGTCCTCGCACTGCTGCATA +
Preference number: 5 (lower is better)
Translates to: RIRSPKYAVIVFNLLLRKPLHDL*SSHCCI
Trigger: TATGCAGCAGTGCGAGGACAAAAGATCATGGAGTGG...CTTCCTTAACAACAAATTGAAGACAATCACTGCATATTTTGGTGACCTAATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGCTCCCATTCTTCCTTaGTATCAGGAAAGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHAPILP*YQESSK
Trigger: CTTGGAACTTTCCTGATACAAAGGAAGAATGGGAGC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TGGAAATCTGCCTTTACTTCACCTGCCATCTCCCTAGTGACTTTAAGAATGCTAAAGTTGACTATAATGTaGCTCCCATTCTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: WKSAFTSPAISLVTLRMLKLTIM*LPFFLC
Trigger: ACAAAGGAAGAATGGGAGCAACATTATAGTCAACTT...TAGCATTCTTAAAGTCACTAGGGAGATGGCAGGTGAAGTAAAGGCAGATTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS GCA 90 bp ATCTCCACAGATGAACTCTATCTTATCTGCTATCCCATAAACTTCTaGATTATTGCGAGCAAGGGCAATCTTAACAGGATCGATATCAAT +
Preference number: 5 (lower is better)
Translates to: ISTDELYLICYPINF*IIASKGNLNRIDIN
Trigger: ATTGATATCGATCCTGTTAAGATTGCCCTTGCTCGCAATAATGCAGAAGTTTATGGGATAGCAGATAAGATAGAGTTCATCTGTGGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGATGACCATCATGACTaGTACAGGAATCTAATTGGC +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHDDHHD*YRNLIG
Trigger: GCCAATTAGATTCCTGTACAAGTCATGATGGTCATC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACAGTTATCCTACCAAATaGAAGTGGCAATCCCATACT +
Preference number: 5 (lower is better)
Translates to: SVATVLQSNQINCKLSRHSYPTK*KWQSHT
Trigger: AGTATGGGATTGCCACTTCAATTTGGTAGGATAACT...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTCACCTTTATTGATCAGCTCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATCTCATACTGTTCAATaGAAGATGGATCATCTGAAG +
Preference number: 5 (lower is better)
Translates to: FTFIDQLSCYCTAEQSDKSHTVQ*KMDHLK
Trigger: CTTCAGATGATCCATCTTCAATTGAACAGTATGAGA...TTTATCTGATTGCTCTGCAGTACAGTAGCAACTGAGCTGATCAATAAAGGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp CGAATTAGGTCACCAAAATATGCAGTGATTGTCTTCAATTTGTTGTTAAGGAAGGATGACCATCATGACTaGTACAGGAATCTAATTGGC +
Preference number: 5 (lower is better)
Translates to: RIRSPKYAVIVFNLLLRKDDHHD*YRNLIG
Trigger: GCCAATTAGATTCCTGTACAAGTCATGATGGTCATC...CTTCCTTAACAACAAATTGAAGACAATCACTGCATATTTTGGTGACCTAATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACCCTTTTAATCCCAAATaGTACAATTTTCGATCCTCC +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHPFNPK*YNFRSS
Trigger: GGAGGATCGAAAATTGTACAATTTGGGATTAAAAGG...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACGGTTTTTCTGACTCTTaGGTAAAGAAGATGTGTTTG +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHGFSDS*VKKMCL
Trigger: CAAACACATCTTCTTTACCAAAGAGTCAGAAAAACC...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TTAAAATATAGAAGTCCCAGGTCTAACCTTCAATGGACAAGTGTTGTATGTCACAGACCATTCACCTTTTaGTTCTTCTTCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LKYRSPRSNLQWTSVVCHRPFTF*FFFLFF
Trigger: GAAGAACAAGAAGAAGAACAAAAAGGTGAATGGTCT...GTGACATACAACACTTGTCCATTGAAGGTTAGACCTGGGACTTCTATATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp TCAGTTGCTACTGTACTGCAGAGCAATCAGATAAATTGTAAACTTTCAAGACACGTAATTTCACCTTTATaGATCAGCTCAGTTGCTACT +
Preference number: 5 (lower is better)
Translates to: SVATVLQSNQINCKLSRHVISPL*ISSVAT
Trigger: AGTAGCAACTGAGCTGATCAATAAAGGTGAAATTAC...GTGTCTTGAAAGTTTACAATTTATCTGATTGCTCTGCAGTACAGTAGCAACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS-3UTR CAA 90 bp CGAATTAGGTCACCAAAATATGCAGTGATTGTCTTCAATTTGTTGTTAAGGAAGAGACCATTCACCTTTTaGTTCTTCTTCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RIRSPKYAVIVFNLLLRKRPFTF*FFFLFF
Trigger: GAAGAACAAGAAGAAGAACAAAAAGGTGAATGGTCT...CTTCCTTAACAACAAATTGAAGACAATCACTGCATATTTTGGTGACCTAATTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523948.5
CDS CCA 72 bp GCCCGGGTCGCGCCTGCCGGGCCTCCGCTCGGTTACTaGAGACTTAAAACAGGCCTCGCCCGCAAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: ARVAPAGPPLGY*RLKTGLARKPW
Trigger: CCAGGGCTTGCGGGCGAGGCCTGTTTTAAGTCTCCAGTAACCGAGCGGAGGCCCGGCAGGCGCGACCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260129.6
ENST00000523948.5
CDS TCA 72 bp GGAGACTTAAAACAGGCCTCGCCCGCAAGCCCTGGATaGGGAGATAGAAACTGGCCCGCGGCCGCTCGCGCC +
Preference number: 6 (lower is better)
Translates to: GDLKQASPASPG*GDRNWPAAARA
Trigger: GGCGCGAGCGGCCGCGGGCCAGTTTCTATCTCCTCATCCAGGGCTTGCGGGCGAGGCCTGTTTTAAGTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260129.6
ENST00000523948.5
CDS CCA 72 bp TGTTCTAATGTCAAAGGTCTCTGCAGTGGCATAGTCTaGCCCTCCCCAAGGTGGGCTGAGGAACACAACATC +
Preference number: 6 (lower is better)
Translates to: CSNVKGLCSGIV*PSPRWAEEHNI
Trigger: GATGTTGTGTTCCTCAGCCCACCTTGGGGAGGGCCAGACTATGCCACTGCAGAGACCTTTGACATTAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS GCA 72 bp ATCAGGAGACATCATTGTTCTAATGTCAAAGGTCTCTaGAGTGGCATAGTCTGGCCCTCCCCAAGGTGGGCT +
Preference number: 6 (lower is better)
Translates to: IRRHHCSNVKGL*SGIVWPSPRWA
Trigger: AGCCCACCTTGGGGAGGGCCAGACTATGCCACTGCAGAGACCTTTGACATTAGAACAATGATGTCTCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS GCA 72 bp CAGCCTCAGAATCAAGTTCACTTTCATCCAGGCCTATaGCTTTGCTGTCATGTGATTCTGCAGTACCACAGG +
Preference number: 6 (lower is better)
Translates to: QPQNQVHFHPGL*LCCHVILQYHR
Trigger: CCTGTGGTACTGCAGAATCACATGACAGCAAAGGCATAGGCCTGGATGAAAGTGAACTTGATTCTGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260129.6
ENST00000523948.5
CDS CAA 90 bp TCCTCACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTaGCTTGTGTTTGCTCCTGAAGACTTCTGTGAATCTAAAGAGGCA +
Preference number: 6 (lower is better)
Translates to: SSLSSPSVPLACGLS*LVFAPEDFCESKEA
Trigger: TGCCTCTTTAGATTCACAGAAGTCTTCAGGAGCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519494.1
CDS CCA 72 bp CCAAATTGTACAATTTTCGATCCTCCACAAATGCCCTaGAGCAAAGGCACAGTATCTTACAATCCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: PNCTIFDPPQMP*SKGTVSYNPPA
Trigger: AGCGGGAGGATTGTAAGATACTGTGCCTTTGCTCCAGGGCATTTGTGGAGGATCGAAAATTGTACAATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS CAA 72 bp CTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTaGTGTTTGCTCCTGAAGACTTCTGTGAATCTAAAG +
Preference number: 6 (lower is better)
Translates to: LHQYHWHVVCLC*CLLLKTSVNLK
Trigger: CTTTAGATTCACAGAAGTCTTCAGGAGCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519494.1
CDS CAA 90 bp CACTTTCATCTCCATCAGTACCACTGGCATGTGGTCTGTCTTTGCTaGTGTTTGCTCCTGAAGACTTCTGTGAATCTAAAGAGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: HFHLHQYHWHVVCLC*CLLLKTSVNLKRQK
Trigger: TTTCTGCCTCTTTAGATTCACAGAAGTCTTCAGGAGCAAACACAAGCAAAGACAGACCACATGCCAGTGGTACTGATGGAGATGAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519494.1
CDS GCA 72 bp CAGAATCAAGTTCACTTTCATCCAGGCCTATGCCTTTaGTGTCATGTGATTCTGCAGTACCACAGGAATAAC +
Preference number: 6 (lower is better)
Translates to: QNQVHFHPGLCL*CHVILQYHRNN
Trigger: GTTATTCCTGTGGTACTGCAGAATCACATGACAGCAAAGGCATAGGCCTGGATGAAAGTGAACTTGATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260129.6
ENST00000523948.5
CDS TCA 72 bp TCAATGGCAATCACTCTCATTCCTGTTAAGGCAAACTaGATGGTATTTCCTCCAACTCCACAGAATGCGTCT +
Preference number: 6 (lower is better)
Translates to: SMAITLIPVKAN*MVFPPTPQNAS
Trigger: AGACGCATTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGGAATGAGAGTGATTGCCATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS CCA 72 bp TGGCAATCACTCTCATTCCTGTTAAGGCAAACTGAATaGTATTTCCTCCAACTCCACAGAATGCGTCTACTA +
Preference number: 6 (lower is better)
Translates to: WQSLSFLLRQTE*YFLQLHRMRLL
Trigger: TAGTAGACGCATTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACAGGAATGAGAGTGATTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS TCA 72 bp CTGTCGCCTGGTCTCCTGAATTGTTGCCACTGTCTCTaGTGTAATAGCCTTTTAATCCCAAATTGTACAATT +
Preference number: 6 (lower is better)
Translates to: LSPGLLNCCHCL*CNSLLIPNCTI
Trigger: AATTGTACAATTTGGGATTAAAAGGCTATTACATCAGAGACAGTGGCAACAATTCAGGAGACCAGGCGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260129.6
CDS GCA 72 bp CAGCAAGAAATCTCCACAGATGAACTCTATCTTATCTaGTATCCCATAAACTTCTGCATTATTGCGAGCAAG +
Preference number: 6 (lower is better)
Translates to: QQEISTDELYLI*YPINFCIIASK
Trigger: CTTGCTCGCAATAATGCAGAAGTTTATGGGATAGCAGATAAGATAGAGTTCATCTGTGGAGATTTCTTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260129.6