RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGOLN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000152291

Ensembl transcript IDs: ENST00000282120.6, ENST00000377386.8, ENST00000398263.6, ENST00000409015.5, ENST00000409232.7, ENST00000444342.2

Found 818 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTACAGAGCCCGGGCCCCAGGGAGGGTGGTCAGCAGCGCAGCCTaGCCAGGCTGGGATCTCCCTTTGGTCATAGCCGTGTTTCCATAT +
Preference number: 1 (lower is better)
Translates to: SYRARAPGRVVSSAA*PGWDLPLVIAVFPY
Trigger: ATATGGAAACACGGCTATGACCAAAGGGAGATCCCAGCCTGGGCAGGCTGCGCTGCTGACCACCCTCCCTGGGGCCCGGGCTCTGTAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR GCA 90 bp CACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTaGAATGCCACAGTCAAGGACCAACTTTCCTACAGAGCCCGGGCC +
Preference number: 1 (lower is better)
Translates to: HLQFSPRSAERNSAE*NATVKDQLSYRARA
Trigger: GGCCCGGGCTCTGTAGGAAAGTTGGTCCTTGACTGTGGCATTGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR GCA 90 bp GGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTaGTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGAC +
Preference number: 1 (lower is better)
Translates to: GECNSNSNRIPRISH*CFMANASPLLGPSD
Trigger: GTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR GCA 90 bp GCCTGCAGAAGCACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTaGAATGCTCTAGTTCTCATCACGCCCATAGCATCTGGCATCAGG +
Preference number: 1 (lower is better)
Translates to: ACRSTGSGASQFPPC*NALVLITPIASGIR
Trigger: CCTGATGCCAGATGCTATGGGCGTGATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTGCTTCTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CCA 90 bp ACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATaGCAAATGCAAGCCCACTACTGGGTCCATCTGACGTTGCCTATC +
Preference number: 1 (lower is better)
Translates to: TATATASPESATAAS*QMQAHYWVHLTLPI
Trigger: GATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR GCA 90 bp ATGGCCTGCAGAAGCACAGGATCTGGTGCCTCACAGTTTCCTCCATaGTGCAATGCTCTAGTTCTCATCACGCCCATAGCATCTGGCATC +
Preference number: 1 (lower is better)
Translates to: MACRSTGSGASQFPP*CNALVLITPIASGI
Trigger: GATGCCAGATGCTATGGGCGTGATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTGCTTCTGCAGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 90 bp GAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTaGTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGTT +
Preference number: 1 (lower is better)
Translates to: ECNSNSNRIPRISHC*FMANASPLLGPSDV
Trigger: AACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR GCA 90 bp CAGAAGCACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATaGTCTAGTTCTCATCACGCCCATAGCATCTGGCATCAGGTTACC +
Preference number: 1 (lower is better)
Translates to: QKHRIWCLTVSSMLQ*SSSHHAHSIWHQVT
Trigger: GGTAACCTGATGCCAGATGCTATGGGCGTGATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 90 bp GGAAGTCCTAAGGAAGGTCACCATGATCAGCAGATAGGAAAGCATTaGCAAGGGCTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCA +
Preference number: 1 (lower is better)
Translates to: GSPKEGHHDQQIGKH*QGLSLKSLVFLGRP
Trigger: TGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAGCCCTTGGCAATGCTTTCCTATCTGCTGATCATGGTGACCTTCCTTAGGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 90 bp TTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTaGTCAAGTTCTGAAATGAGTGGCATGATGAAGAGCTGGTGGAGC +
Preference number: 1 (lower is better)
Translates to: FLGRPERHQILTALF*SSSEMSGMMKSWWS
Trigger: GCTCCACCAGCTCTTCATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 90 bp CAGACCCAAACCCTTCACAGAGAGACTCTAAGTGTACATCTGACTTaGAGAACTAGACGAGTTGAGTCACTGTTAGCTCTGGATATACCG +
Preference number: 1 (lower is better)
Translates to: QTQTLHRETLSVHLT*RTRRVESLLALDIP
Trigger: CGGTATATCCAGAGCTAACAGTGACTCAACTCGTCTAGTTCTGCAAGTCAGATGTACACTTAGAGTCTCTCTGTGAAGGGTTTGGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CCA 90 bp CAAATAGGACAGATGGGAACAGAAAAATCTGGGTGCATACGAAGGTaGATGGAAAGGAGCTGGTACAGATGGGCACAACCAGAAAACATG +
Preference number: 1 (lower is better)
Translates to: QIGQMGTEKSGCIRR*MERSWYRWAQPENM
Trigger: CATGTTTTCTGGTTGTGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTCTGTTCCCATCTGTCCTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 90 bp TATGTGTATCTAGATGTTTCTAGTTTGTTGTCTAAAAAGGGCGAATaGAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGC +
Preference number: 1 (lower is better)
Translates to: YVYLDVSSLLSKKGE*NSNSNRIPRISHCC
Trigger: GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTTTTTAGACAACAAACTAGAAACATCTAGATACACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR TCA 90 bp GCTCAGAAACAACTCTCTTTAGGCTCTCTACAATGCGGTAGAGCATaGTTAGAAAAGATAAACCTTCAAACAATAGTGTTGTCCAAGACA +
Preference number: 1 (lower is better)
Translates to: AQKQLSLGSLQCGRA*LEKINLQTIVLSKT
Trigger: TGTCTTGGACAACACTATTGTTTGAAGGTTTATCTTTTCTAATCATGCTCTACCGCATTGTAGAGAGCCTAAAGAGAGTTGTTTCTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CCA 90 bp GGAACCCACGGAATTTCTTCATTTGTATTAACTCCTGACATGGCATaGAAGAAGAATTTTTATCAAATACCCTTGGCATCTTATATCAGA +
Preference number: 1 (lower is better)
Translates to: GTHGISSFVLTPDMA*KKNFYQIPLASYIR
Trigger: TCTGATATAAGATGCCAAGGGTATTTGATAAAAATTCTTCTTCCATGCCATGTCAGGAGTTAATACAAATGAAGAAATTCCGTGGGTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGCAGCCCCCTACCTCTaGCAGCCCAGACCCGCCACT +
Preference number: 2 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDAAPYL*QPRPAT
Trigger: AGTGGCGGGTCTGGGCTGGCAGAGGTAGGGGGCTGC...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR GCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAGCAGCCCCCTACCTCTaGCAGCCCAGACCCGCCACT +
Preference number: 2 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGAAPYL*QPRPAT
Trigger: AGTGGCGGGTCTGGGCTGGCAGAGGTAGGGGGCTGC...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR TCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGAAGAGAGGCCTGGCTTTaGGGGCCTCTTCACCACCAG +
Preference number: 2 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGREAWL*GPLHHQ
Trigger: CTGGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCT...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGGTCAGCAGCGCAGCCTaGCCAGGCTGGGATCTCCCT +
Preference number: 2 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKVSSAA*PGWDLP
Trigger: AGGGAGATCCCAGCCTGGGCAGGCTGCGCTGCTGAC...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR TCA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGAGAATGGGTTAATGGCTaGGGAGACAGTCAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: KGTDGHPTGGALARLGCREWVNG*GDSQRN
Trigger: ATTCCTTTGACTGTCTCCTCAGCCATTAACCCATTC...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGAGGACAGTGGCCTCACTaGCAGGAAGCCCAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGGQWPH*QEAQVL
Trigger: CAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTCC...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp GGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGCAAGCCCACTACTaGGTCCATCTGACGTTGCCT +
Preference number: 2 (lower is better)
Translates to: GECNSNSNRIPRISHCCFMQAHY*VHLTLP
Trigger: AGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCAT...GAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR-3UTR GCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATTCACCAAAGTGCAGGTaGAAAGCCCAAAGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: IPLHSPSEEERMEATSINSPKCR*KAQSSP
Trigger: GGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGA...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR GCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPATMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR CCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTGCAGCCTGCCCAGGCTaGGATCTCCCTTTGGTCATA +
Preference number: 2 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTAACPG*DLPLVI
Trigger: TATGACCAAAGGGAGATCCCAGCCTGGGCAGGCTGC...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR CCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCAGCAGCCTGCCCAGGCTaGGATCTCCCTTTGGTCATA +
Preference number: 2 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAAACPG*DLPLVI
Trigger: TATGACCAAAGGGAGATCCCAGCCTGGGCAGGCTGC...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR CCA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGAAGGGGAATTTCCATTTaGATGGTCAATAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: KGTDGHPTGGALARLGCRRGISI*MVNSVQ
Trigger: CTGGACACTATTGACCATCCAAATGGAAATTCCCCT...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGAGGACAGTGGCCTCACTaGCAGGAAGCCCAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGGQWPH*QEAQVL
Trigger: CAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTCC...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCTGGATGGAAAGGAGCTaGTACAGATGGGCACAACCA +
Preference number: 2 (lower is better)
Translates to: EETVKGIERPGFEGLFTTWMERS*YRWAQP
Trigger: TGGTTGTGCCCATCTGTACCAGCTCCTTTCCATCCA...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATAAACAAACTGGGCCCTaGCGAAACAGGCGGATTGGG +
Preference number: 2 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHKQTGP*RNRRIG
Trigger: CCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTT...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGGCAGCCCCCTACCTCTaGCAGCCCAGACCCGCCACT +
Preference number: 2 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTAAPYL*QPRPAT
Trigger: AGTGGCGGGTCTGGGCTGGCAGAGGTAGGGGGCTGC...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGCAGCCCCCTACCTCTaGCAGCCCAGACCCGCCACT +
Preference number: 2 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFAAPYL*QPRPAT
Trigger: AGTGGCGGGTCTGGGCTGGCAGAGGTAGGGGGCTGC...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR GCA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: PLHSPSEEERMEATSINKTMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR GCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: IPLHSPSEEERMEATSINTMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR CCA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGAACTCCTGACATGGCATaGAAGAAGAATTTTTATCAA +
Preference number: 2 (lower is better)
Translates to: KGTDGHPTGGALARLGCRTPDMA*KKNFYQ
Trigger: TTGATAAAAATTCTTCTTCCATGCCATGTCAGGAGT...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGAGAATGGGTTAATGGCTaGGGAGACAGTCAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGEWVNG*GDSQRN
Trigger: ATTCCTTTGACTGTCTCCTCAGCCATTAACCCATTC...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATTGGATGGAAAGGAGCTaGTACAGATGGGCACAACCA +
Preference number: 2 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHWMERS*YRWAQP
Trigger: TGGTTGTGCCCATCTGTACCAGCTCCTTTCCATCCA...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGGCATACGAAGGTGGATaGAAAGGAGCTGGTACAGAT +
Preference number: 2 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQAYEGG*KGAGTD
Trigger: ATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGC...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATCACTGGAAGCCATCATaGGAGTACTATGTCAGAGCG +
Preference number: 2 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHHWKPS*EYYVRA
Trigger: CGCTCTGACATAGTACTCCCATGATGGCTTCCAGTG...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGACATCAGTACAGAGAATaGCCCAAGAAGGGTAGGAGT +
Preference number: 2 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGHQYRE*PKKGRS
Trigger: ACTCCTACCCTTCTTGGGTCATTCTCTGTACTGATG...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAAGCACAATCCATTGGTaGCGTTCATCTTTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGSTIHW*RSSFSR
Trigger: TCTGGAAAAAGATGAACGTCACCAATGGATTGTGCT...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
3UTR-3UTR GCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGATTCAAAGTAGCTCTTTaGCCATTGGCATTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGFKVAL*PLAFPH
Trigger: ATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAA...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCCTCGGTACAACTAAGTaGAAGTTGATTCACTTTGTC +
Preference number: 2 (lower is better)
Translates to: EETVKGIERPGFEGLFTTLGTTK*KLIHFV
Trigger: GACAAAGTGAATCAACTTCCACTTAGTTGTACCGAG...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGGGGTGCATACGAAGGTaGATGGAAAGGAGCTGGTAC +
Preference number: 2 (lower is better)
Translates to: LSLKSLVFLGRPERHQILGCIRR*MERSWY
Trigger: GTACCAGCTCCTTTCCATCCACCTTCGTATGCACCC...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCTCATGTTTTCTCGCATaGAACATAAACTTGCCCTAT +
Preference number: 2 (lower is better)
Translates to: EETVKGIERPGFEGLFTTSCFLA*NINLPY
Trigger: ATAGGGCAAGTTTATGTTTCATGCGAGAAAACATGA...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGAGTGAGGAAGGTGTATaGGGAAACAAACTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKSEEGV*GNKLGP
Trigger: AGGGCCCAGTTTGTTTCCTCATACACCTTCCTCACT...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGCAGTGCAGAGTGCAATaGCACAGTCAAGGACCAACT +
Preference number: 2 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKQCRVQ*HSQGPT
Trigger: AGTTGGTCCTTGACTGTGGCATTGCACTCTGCACTG...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGTTGGCCAGGTTGGGATaGAGAGAAAAACAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: LSLKSLVFLGRPERHQILLARLG*REKQAG
Trigger: TCCTGCCTGTTTTTCTCTGCATCCCAACCTGGCCAA...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATACATCAGATCCTGACTaGCCTGTTTTGCTCAAGTTC +
Preference number: 2 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHTSDPD*PVLLKF
Trigger: GAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGT...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp CTATTAAAGTTTATGGAGCGCTGGCAGAATGCAGAAAGCTCAGGACTGGGAGACTCTAAAAAGGGCGAATaGAACAGCAACAGCAACCGC +
Preference number: 2 (lower is better)
Translates to: LLKFMERWQNAESSGLGDSKKGE*NSNSNR
Trigger: GCGGTTGCTGTTGCTGTTGCATTCGCCCTTTTTAGA...GTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCATAAACTTTAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR-3UTR CCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATGGGAACAGAAAAATCTaGGTGCATACGAAGGTGGAT +
Preference number: 2 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHGNRKI*VHTKVD
Trigger: ATCCACCTTCGTATGCACCCAGATTTTTCTGTTCCC...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp CCAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAAGGGGAATTTCCATTTaGATGGTCAATAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: PKKHGKLESRGHSRNKGTRGISI*MVNSVQ
Trigger: CTGGACACTATTGACCATCCAAATGGAAATTCCCCT...TGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CAA 90 bp TTGAGGGCCTCTTCACCACCAGCACAAGATAAGGCAAAGGACCATTaGTCAGAGACACCAAGAAAGGGGAATTTCCATTTGGATGGTCAA +
Preference number: 2 (lower is better)
Translates to: LRASSPPAQDKAKDH*SETPRKGNFHLDGQ
Trigger: TTGACCATCCAAATGGAAATTCCCCTTTCTTGGTGTCTCTGACAAATGGTCCTTTGCCTTATCTTGTGCTGGTGGTGAAGAGGCCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp CCAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACATTAGAAAAGTTTAGTTaGCAGACAGAGACCGAAGTG +
Preference number: 2 (lower is better)
Translates to: PKKHGKLESRGHSRNKGTLEKFS*QTETEV
Trigger: CACTTCGGTCTCTGTCTGTCAACTAAACTTTTCTAA...TGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGCAGTCTTTCCAAGAGTaGGCTCCTTTCCAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKQSFQE*APFQEA
Trigger: AGCTTCTTGGAAAGGAGCTCACTCTTGGAAAGACTG...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: HQILTALFCSSSEMSGMMTMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGATTTGTATTAACTCCTaGCATGGCATGGAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQICINS*HGMEEE
Trigger: TTCTTCTTCCATGCCATGTCAGGAGTTAATACAAAT...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATTTAGAAAAGTTTAGTTaGCAGACAGAGACCGAAGTG +
Preference number: 2 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHLEKFS*QTETEV
Trigger: CACTTCGGTCTCTGTCTGTCAACTAAACTTTTCTAA...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGTTTAACCTGCTGTTTTaGTTTGCTGCTGAAGTCTTT +
Preference number: 2 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQFNLLF*FAAEVF
Trigger: AAAGACTTCAGCAGCAAACCAAAACAGCAGGTTAAA...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp GAAAAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATGGGCAATTTGTATTAACTCCTaGCATGGCATGGAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: EKSGCIRRWMERSWYRWAICINS*HGMEEE
Trigger: TTCTTCTTCCATGCCATGTCAGGAGTTAATACAAAT...TGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATCAATGCGGTAGAGCATaGTTAGAAAAGATAAACCTT +
Preference number: 2 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHQCGRA*LEKINL
Trigger: AAGGTTTATCTTTTCTAATCATGCTCTACCGCATTG...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGAGCACAATCCATTGGTaGCGTTCATCTTTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: LSLKSLVFLGRPERHQILSTIHW*RSSFSR
Trigger: TCTGGAAAAAGATGAACGTCACCAATGGATTGTGCT...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGAGCACAATCCATTGGTaGCGTTCATCTTTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKSTIHW*RSSFSR
Trigger: TCTGGAAAAAGATGAACGTCACCAATGGATTGTGCT...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGACTCATAAAAGCCCTTTaGAAAAACTGCAGACCAAAA +
Preference number: 2 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGLIKAL*KNCRPK
Trigger: TTTTGGTCTGCAGTTTTTCCAAAGGGCTTTTATGAG...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGCAACTAAGTGGAAGTTaGTTCACTTTGTCTCAAGCT +
Preference number: 2 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKQLSGS*FTLSQA
Trigger: AGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTG...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTCAGTGCAGAGTGCAATaGCACAGTCAAGGACCAACT +
Preference number: 2 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFQCRVQ*HSQGPT
Trigger: AGTTGGTCCTTGACTGTGGCATTGCACTCTGCACTG...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR TCA 90 bp GTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCGAATGGGTTAATGGCTaGGGAGACAGTCAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: VHTKASDQGKYFGKISLSEWVNG*GDSQRN
Trigger: ATTCCTTTGACTGTCTCCTCAGCCATTAACCCATTC...GGAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGTTTAACCTGCTGTTTTaGTTTGCTGCTGAAGTCTTT +
Preference number: 2 (lower is better)
Translates to: HQILTALFCSSSEMSGMMFNLLF*FAAEVF
Trigger: AAAGACTTCAGCAGCAAACCAAAACAGCAGGTTAAA...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGCTCATAAAAGCCCTTTaGAAAAACTGCAGACCAAAA +
Preference number: 2 (lower is better)
Translates to: LSLKSLVFLGRPERHQILLIKAL*KNCRPK
Trigger: TTTTGGTCTGCAGTTTTTCCAAAGGGCTTTTATGAG...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGGAATTTCCATTTGGATaGTCAATAGTGTCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: RHQILTALFCSSSEMSGMEFPFG*SIVSSS
Trigger: AGAACTGGACACTATTGACCATCCAAATGGAAATTC...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAAACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKTMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR TCA 90 bp AGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCGCTATCCGCCAAGAATaGAAATGTCAACTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: SSHQSFRPGKIFWKDQSFAIRQE*KCQLKA
Trigger: AGCTTTGAGTTGACATTTTCATTCTTGGCGGATAGC...GAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR TCA 90 bp GTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCAGACAGAGACCGAAGTaGGTTAGTAAAAGTCATGAA +
Preference number: 2 (lower is better)
Translates to: VHTKASDQGKYFGKISLSRQRPK*VSKSHE
Trigger: TTCATGACTTTTACTAACTCACTTCGGTCTCTGTCT...GGAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAATTCAAAGTAGCTCTTTaGCCATTGGCATTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: REKFLSMTTKLNYSIPAEFKVAL*PLAFPH
Trigger: ATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAA...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTCCAAGTTCTGTTTTATaGTCGGTACAACTAAGTGGA +
Preference number: 2 (lower is better)
Translates to: DSLSLEKFTPKLQTRENIPSSVL*SVQLSG
Trigger: TCCACTTAGTTGTACCGAGCATAAAACAGAACTTGG...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR GCA 90 bp GTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCCCAAGTTCTGTTTTATaGTCGGTACAACTAAGTGGA +
Preference number: 2 (lower is better)
Translates to: VHTKASDQGKYFGKISLSPSSVL*SVQLSG
Trigger: TCCACTTAGTTGTACCGAGCATAAAACAGAACTTGG...GGAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CCA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAATTTAACCTGCTGTTTTaGTTTGCTGCTGAAGTCTTT +
Preference number: 2 (lower is better)
Translates to: REKFLSMTTKLNYSIPAEFNLLF*FAAEVF
Trigger: AAAGACTTCAGCAGCAAACCAAAACAGCAGGTTAAA...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CCA 72 bp GCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATaGCAAATGCAAGCCCACTACTGGGTCCATCTGACG +
Preference number: 3 (lower is better)
Translates to: ATASPESATAAS*QMQAHYWVHLT
Trigger: CGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR TCA 72 bp CAGAGTCTGCTCAAAAGCTCAGCTCTGTGGACTCCGTaGCAAAATGTACGCGTCCACTGCCGACCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: QSLLKSSALWTP*QNVRVHCRPSW
Trigger: CCAAGAGGGTCGGCAGTGGACGCGTACATTTTGTCACGGAGTCCACAGAGCTGAGCTTTTGAGCAGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 72 bp AGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTaGTTCATGGCAAATGCAAGCCCACTACTGGGTCCA +
Preference number: 3 (lower is better)
Translates to: SNSNRIPRISHC*FMANASPLLGP
Trigger: TGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR CCA 72 bp GGTGGGGTAGTGAGGAAGGTGTATGAGGAAACAAACTaGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGA +
Preference number: 3 (lower is better)
Translates to: GGVVRKVYEETN*ALTKQADWGRR
Trigger: TCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCCTCATACACCTTCCTCACTACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 72 bp AACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTaGTGCTTCATGGCAAATGCAAGCCCACTACTGGGT +
Preference number: 3 (lower is better)
Translates to: NSNSNRIPRISH*CFMANASPLLG
Trigger: ACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR-3UTR CAA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGGGCTGGGATCTCCCTTaGGTCATAGCCGTGTTTCCA +
Preference number: 3 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKGWDLP*VIAVFP
Trigger: TGGAAACACGGCTATGACCAAAGGGAGATCCCAGCC...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR-3UTR CAA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCACCTGCTGTTTTGGTTaGCTGCTGAAGTCTTTGAAG +
Preference number: 3 (lower is better)
Translates to: EETVKGIERPGFEGLFTTTCCFG*LLKSLK
Trigger: CTTCAAAGACTTCAGCAGCAAACCAAAACAGCAGGT...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 72 bp AGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATaGTCTAGTTCTCATCACGCCCATAGCATCTGGCAT +
Preference number: 3 (lower is better)
Translates to: RIWCLTVSSMLQ*SSSHHAHSIWH
Trigger: ATGCCAGATGCTATGGGCGTGATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 72 bp AGCACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTaGAATGCTCTAGTTCTCATCACGCCCATAGCATCT +
Preference number: 3 (lower is better)
Translates to: STGSGASQFPPC*NALVLITPIAS
Trigger: AGATGCTATGGGCGTGATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 72 bp AGAAGCACAGGATCTGGTGCCTCACAGTTTCCTCCATaGTGCAATGCTCTAGTTCTCATCACGCCCATAGCA +
Preference number: 3 (lower is better)
Translates to: RSTGSGASQFPP*CNALVLITPIA
Trigger: TGCTATGGGCGTGATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CCA 72 bp GGGTTTTCAGAAAATGGCCTGCAGAAGCACAGGATCTaGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCT +
Preference number: 3 (lower is better)
Translates to: GFSENGLQKHRI*CLTVSSMLQCS
Trigger: AGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTGCTTCTGCAGGCCATTTTCTGAAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGGTAGCTCTTTGCCCATaGGCATTTCCCCATCTTCTA +
Preference number: 3 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQVALCP*AFPHLL
Trigger: TAGAAGATGGGGAAATGCCAATGGGCAAAGAGCTAC...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATTGTGGGACCCCTCATTaGAGTCACATCCATATGGCA +
Preference number: 3 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHCGTPH*SHIHMA
Trigger: TGCCATATGGATGTGACTCAAATGAGGGGTCCCACA...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CCA 72 bp TGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATaGGCACAACCAGAAAACATGAGGAGGGGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: CIRRWMERSWYR*AQPENMRRGKE
Trigger: TTCCTTTCCCCTCCTCATGTTTTCTGGTTGTGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CCA 72 bp AAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTaGTACAGATGGGCACAACCAGAAAACATGAGGAGG +
Preference number: 3 (lower is better)
Translates to: KSGCIRRWMERS*YRWAQPENMRR
Trigger: CCTCCTCATGTTTTCTGGTTGTGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATGTAGCTCTTTGCCCATaGGCATTTCCCCATCTTCTA +
Preference number: 3 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHVALCP*AFPHLL
Trigger: TAGAAGATGGGGAAATGCCAATGGGCAAAGAGCTAC...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR TCA 72 bp AAAGAGTGTTTCTGCGTGGGCCTATTTCCTCATCTGTaGAGGGAGGTAGCTGCTGTAGAGTATTCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: KECFCVGLFPHL*REVAAVEYSKV
Trigger: GACCTTGGAATACTCTACAGCAGCTACCTCCCTTCACAGATGAGGAAATAGGCCCACGCAGAAACACTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR GCA 72 bp CAAATGCCTATTAAAGTTTATGGAGCGCTGGCAGAATaGAGAAAGCTCAGGACTGGGAGACTAGGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: QMPIKVYGALAE*RKLRTGRLGSC
Trigger: GCAACTCCCTAGTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCATAAACTTTAATAGGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
3UTR-3UTR CAA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATACAACTAAGTGGAAGTaGATTCACTTTGTCTCAAGC +
Preference number: 3 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHTTKWK*IHFVSS
Trigger: GCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGT...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 72 bp AGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTaGTCAAGTTCTGAAATGAGTGGCATGATGAAGAGC +
Preference number: 3 (lower is better)
Translates to: RPERHQILTALF*SSSEMSGMMKS
Trigger: GCTCTTCATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR GCA 72 bp AAGGAAGGTCACCATGATCAGCAGATAGGAAAGCATTaGCAAGGGCTGTCCCTCAAGAGCTTAGTTTTCTTA +
Preference number: 3 (lower is better)
Translates to: KEGHHDQQIGKH*QGLSLKSLVFL
Trigger: TAAGAAAACTAAGCTCTTGAGGGACAGCCCTTGGCAATGCTTTCCTATCTGCTGATCATGGTGACCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAAGGCTGGGATCTCCCTTaGGTCATAGCCGTGTTTCCA +
Preference number: 3 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKGWDLP*VIAVFP
Trigger: TGGAAACACGGCTATGACCAAAGGGAGATCCCAGCC...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR TCA 72 bp AACCCCAAAAGGTCTGTAACTGGATTCTCTAAGCCTTaGGAAGTTCACACCAAAGCTTCAGACCAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: NPKRSVTGFSKP*EVHTKASDQGK
Trigger: TTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATCCAGTTACAGACCTTTTGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp TTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTGGGTTCTTTAGGCTTCAAACAATAGTGTaGTCCAAGACACTACCCTCA +
Preference number: 3 (lower is better)
Translates to: FNDNQAELFDTSRTGFFRLQTIV*SKTLPS
Trigger: TGAGGGTAGTGTCTTGGACAACACTATTGTTTGAAG...CCTAAAGAACCCAGTTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTCATCTCCCAAGTTATTaGTATTTCCCTGAGATCAGC +
Preference number: 3 (lower is better)
Translates to: DSLSLEKFTPKLQTRENIHLPSY*YFPEIS
Trigger: GCTGATCTCAGGGAAATACAAATAACTTGGGAGATG...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp TTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTGGGTTCTTTAGGTACACTGAGGTAAAATaGGCAGAGAGTATAGTTTCT +
Preference number: 3 (lower is better)
Translates to: FNDNQAELFDTSRTGFFRYTEVK*AESIVS
Trigger: AGAAACTATACTCTCTGCCAATTTTACCTCAGTGTA...CCTAAAGAACCCAGTTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAATTCAGACTTACTGCCTaGACAGCACAGAATTCATCT +
Preference number: 3 (lower is better)
Translates to: REKFLSMTTKLNYSIPAEFRLTA*TAQNSS
Trigger: AGATGAATTCTGTGCTGTCAAGGCAGTAAGTCTGAA...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR TCA 72 bp CAAAGTATTATAAGACTAACGCATCAGTACAGAGAATaGCCCAAGAAGGGTAGGAGTTCATTCCTTACCTTC +
Preference number: 3 (lower is better)
Translates to: QSIIRLTHQYRE*PKKGRSSFLTF
Trigger: GAAGGTAAGGAATGAACTCCTACCCTTCTTGGGTCATTCTCTGTACTGATGCGTTAGTCTTATAATACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGTACACTGAGGTAAAATaGGCAGAGAGTATAGTTTCT +
Preference number: 3 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTYTEVK*AESIVS
Trigger: AGAAACTATACTCTCTGCCAATTTTACCTCAGTGTA...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR-3UTR CAA 90 bp AGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCAAGGCAAAATGGACTTaGTGGGAAATGTATCTCATA +
Preference number: 3 (lower is better)
Translates to: SSHQSFRPGKIFWKDQSFKAKWT*WEMYLI
Trigger: TATGAGATACATTTCCCACAAAGTCCATTTTGCCTT...GAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CCA 72 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTaGAAGTTGATTCACTTTGTCTCAAGCTACATAAAA +
Preference number: 3 (lower is better)
Translates to: KPKFCFMLGTTK*KLIHFVSSYIK
Trigger: TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGACACGGCTCCCGCCGCTaGGACGTTCAGGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: KGTDGHPTGGALARLGCRHGSRR*DVQEDQ
Trigger: TTGGTCCTCCTGAACGTCGCAGCGGCGGGAGCCGTG...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCGTCAGCAGCGCAGCCTaGCCAGGCTGGGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAVSSAA*PGWDLP
Trigger: AGGGAGATCCCAGCCTGGGCAGGCTGCGCTGCTGAC...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCGCTGGAGCCGTCTTTTaGGGTCTGGCCGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAAGAVF*GLAVRT
Trigger: GGTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGC...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCCTCTTCTTTGGGCGGTaGGCCCTCCTCGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPALFFGR*ALLGSC
Trigger: ACAGGACCCGAGGAGGGCTCACCGCCCAAAGAAGAG...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGACTCCAGTCCCGCCCCTaGTGCGCGCGTCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGLQSRP*CARLSV
Trigger: GACTGAGAGACGCGCGCAGCAGGGGCGGGACTGGAG...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR CCA 90 bp GGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCGAGCCTCCAGGCCGTTaGCTCAAGCTGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GECNSNSNRIPRISHCCFEPPGR*LKLGWV
Trigger: CACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTC...GAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCGCTGGAGCCGTCTTTTaGGGTCTGGCCGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSAGAVF*GLAVRT
Trigger: GGTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGC...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGGCTGGAGCCGTCTTTTaGGGTCTGGCCGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQAGAVF*GLAVRT
Trigger: GGTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGC...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCGCTGGGCCCGTCTATTaGGCCCTGCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GECNSNSNRIPRISHCCFAGPVY*ALLLCT
Trigger: GGTGCAGAGGAGCAGGGCCCAATAGACGGGCCCAGC...GAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGAGCAGCCTGCCCAGGCTaGGATCTCCCTTTGGTCATA +
Preference number: 4 (lower is better)
Translates to: KGTDGHPTGGALARLGCRAACPG*DLPLVI
Trigger: TATGACCAAAGGGAGATCCCAGCCTGGGCAGGCTGC...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAACTCCAGTCCCGCCCCTaGTGCGCGCGTCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PLHSPSEEERMEATSINKLQSRP*CARLSV
Trigger: GACTGAGAGACGCGCGCAGCAGGGGCGGGACTGGAG...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR GCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCACACGGCTCCCGCCGCTaGGACGTTCAGGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPHGSRR*DVQEDQ
Trigger: TTGGTCCTCCTGAACGTCGCAGCGGCGGGAGCCGTG...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGGCAACACGGCTCCCGCCGCTaGGACGTTCAGGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: ATATATASPESATAASWQHGSRR*DVQEDQ
Trigger: TTGGTCCTCCTGAACGTCGCAGCGGCGGGAGCCGTG...TTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCGTCTGCGGCTCCGGATaGGACTTGGTAGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAVCGSG*DLVEPP
Trigger: TGGAGGCTCTACCAAGTCGCATCCGGAGCCGCAGAC...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCTGGGCCCTGCTCCTCTaGACCGGACTTGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAWALLL*TGLVRA
Trigger: GGCTCTAACAAGTCCGGTGCAGAGGAGCAGGGCCCA...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCGTCAGCAGCGCAGCCTaGCCAGGCTGGGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: EETVKGIERPGFEGLFTTVSSAA*PGWDLP
Trigger: AGGGAGATCCCAGCCTGGGCAGGCTGCGCTGCTGAC...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAGTCAGCAGCGCAGCCTaGCCAGGCTGGGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: HIPLHSPSEEERMEATSIVSSAA*PGWDLP
Trigger: AGGGAGATCCCAGCCTGGGCAGGCTGCGCTGCTGAC...TATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCGAGCCTCCAGGCCGTTaGCTCAAGCTGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EETVKGIERPGFEGLFTTEPPGR*LKLGWV
Trigger: CACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTC...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCCAGAATCAGCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCAGCTGGAGCCGTCTTTTaGGGTCTGGCCGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: PRISHCCFMANASPLLGPAGAVF*GLAVRT
Trigger: GGTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGC...TGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp CATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAGCTGGGCCCGTCTATTaGGCCCTGCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: HIPLHSPSEEERMEATSIAGPVY*ALLLCT
Trigger: GGTGCAGAGGAGCAGGGCCCAATAGACGGGCCCAGC...TATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp TGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCGCTGGGCCCGTCTATTaGGCCCTGCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: CFHIPLHSPSEEERMEATAGPVY*ALLLCT
Trigger: GGTGCAGAGGAGCAGGGCCCAATAGACGGGCCCAGC...GGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
3UTR CAA 72 bp GTCAGCAGCGCAGCCTGCCCAGGCTGGGATCTCCCTTaGGTCATAGCCGTGTTTCCATATACCCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: VSSAACPGWDLP*VIAVFPYTPPL
Trigger: GAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGGGAGATCCCAGCCTGGGCAGGCTGCGCTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGACAGCTTCTTCTTGCTTaGCGCTTTCGGTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: KGTDGHPTGGALARLGCRQLLLA*RFRWPR
Trigger: TCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTG...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TCAGCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGCTCTTCTTTGGGCGGTaGGCCCTCCTCGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SATAASWQMQAHYWVHLTLFFGR*ALLGSC
Trigger: ACAGGACCCGAGGAGGGCTCACCGCCCAAAGAAGAG...CGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGAGAGAGGCCTGGCTTTaGGGGCCTCTTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQREAWL*GPLHHQ
Trigger: CTGGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCT...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGAATATCTATCAGAGGGTaGGGGGCTGGCTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: KGTDGHPTGGALARLGCRISIRG*GAGLLA
Trigger: TGCCAGTAAGCCAGCCCCTCACCCTCTGATAGATAT...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCAGTCCCGCCCCTGCTaGGCGCGTCTCTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYQSRPC*ARLSVS
Trigger: GGAGACTGAGAGACGCGCGCAGCAGGGGCGGGACTG...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR GCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCGGTGGAGACGTTTCCTaGAGAAGGCCGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAGGDVS*RRPYSS
Trigger: GCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACC...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTGTCTGCGGCTCCGGATaGGACTTGGTAGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RANATATATASPESATAAVCGSG*DLVEPP
Trigger: TGGAGGCTCTACCAAGTCGCATCCGGAGCCGCAGAC...AGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp AAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCGCCGTTGGCTCAAGCTaGGGTGGGTGGAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: KGECNSNSNRIPRISHCCAVGSS*GGWRRF
Trigger: GAAACGTCTCCACCCACCCCAGCTTGAGCCAACGGC...GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCGCTGGAGCCGTCTTTTaGGGTCTGGCCGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLAGAVF*GLAVRT
Trigger: GGTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGC...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCCCGGGAAGGCTGCTCTaGAACCACCTTGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAPGRLL*NHLVRA
Trigger: AGCCCTAACAAGGTGGTTCCAGAGCAGCCTTCCCGG...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp TGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCCCTGCGGGGGAGAAATaGGGTCAGTTTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CFHIPLHSPSEEERMEATPAGEK*GQFPPQ
Trigger: CTGGGGAGGAAACTGACCTCATTTCTCCCCCGCAGG...GGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp AAAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCCTGCGGGGGAGAAATaGGGTCAGTTTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KGRMQQQQQPHPQNQPLLPAGEK*GQFPPQ
Trigger: CTGGGGAGGAAACTGACCTCATTTCTCCCCCGCAGG...CAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGACTCTTCTTTGGGCGGTaGGCCCTCCTCGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGLFFGR*ALLGSC
Trigger: ACAGGACCCGAGGAGGGCTCACCGCCCAAAGAAGAG...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGATCTGCCAGAAGGAACTaGACTCTGGAAGTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: KGTDGHPTGGALARLGCRSARRN*TLEVLR
Trigger: CCTTAGGACTTCCAGAGTTCAGTTCCTTCTGGCAGA...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATGCGCTCGCCTTCGGCTaGTTCGCTTACTGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINALAFG*FAYCRR
Trigger: TCGGCGACAGTAAGCGAAGCAGCCGAAGGCGAGCGC...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR GCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTCACGGCTCCCGCCGCTaGGACGTTCAGGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTHGSRR*DVQEDQ
Trigger: TTGGTCCTCCTGAACGTCGCAGCGGCGGGAGCCGTG...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGTCTGCGGCTCCGGATaGGACTTGGTAGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPVCGSG*DLVEPP
Trigger: TGGAGGCTCTACCAAGTCGCATCCGGAGCCGCAGAC...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCGTCTGCGGCTCCGGATaGGACTTGGTAGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCVCGSG*DLVEPP
Trigger: TGGAGGCTCTACCAAGTCGCATCCGGAGCCGCAGAC...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCGGCTGCTCTCCGCGCTaGCATTTCCAGAACCGTTCG +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCGCSPR*HFQNRS
Trigger: CGAACGGTTCTGGAAATGGCAGCGCGGAGAGCAGCC...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGGCTGCTCTCCGCGCTaGCATTTCCAGAACCGTTCG +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPGCSPR*HFQNRS
Trigger: CGAACGGTTCTGGAAATGGCAGCGCGGAGAGCAGCC...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp TGGAGCGCTGGCAGAATGCAGAAAGCTCAGGACTGGGAGACTAGGGAGTTGCTAGGCTGCTCTCCGCGCTaGCATTTCCAGAACCGTTCG +
Preference number: 4 (lower is better)
Translates to: WSAGRMQKAQDWETRELLGCSPR*HFQNRS
Trigger: CGAACGGTTCTGGAAATGGCAGCGCGGAGAGCAGCC...TAGCAACTCCCTAGTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGGCAGCCCCCTACCTCTaGCAGCCCAGACCCGCCACT +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKAAPYL*QPRPAT
Trigger: AGTGGCGGGTCTGGGCTGGCAGAGGTAGGGGGCTGC...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCGGAGCGCTGGCAGAATaGAGAAAGCTCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GECNSNSNRIPRISHCCFGALAE*RKLRTG
Trigger: CCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCC...GAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACGAGCCTCCAGGCCGTTaGCTCAAGCTGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYEPPGR*LKLGWV
Trigger: CACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTC...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCCCTGCGGGGGAGAAATaGGGTCAGTTTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLPAGEK*GQFPPQ
Trigger: CTGGGGAGGAAACTGACCTCATTTCTCCCCCGCAGG...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCGCTCTGTGGACTCCGTaGCAAAATGTACGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSALWTP*QNVRVH
Trigger: GTGGACGCGTACATTTTGTCACGGAGTCCACAGAGC...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGACACGGCTCCCGCCGCTaGGACGTTCAGGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGHGSRR*DVQEDQ
Trigger: TTGGTCCTCCTGAACGTCGCAGCGGCGGGAGCCGTG...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGGCAAGGTGGAGACGTTTCCTaGAGAAGGCCGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: ATATATASPESATAASWQGGDVS*RRPYSS
Trigger: GCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACC...TTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGGGCCCTGCTCCTCTaGACCGGACTTGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLWALLL*TGLVRA
Trigger: GGCTCTAACAAGTCCGGTGCAGAGGAGCAGGGCCCA...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGACCGTCTATTGGGCCCTaGTCCTCTGCACCGGACTTG +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGPSIGP*SSAPDL
Trigger: CAAGTCCGGTGCAGAGGAGCAGGGCCCAATAGACGG...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCATGCAAAGAAGTGGCTaGTCTCCGCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAMQRSG*SPRCHF
Trigger: GAAATGGCAGCGCGGAGAGCAGCCACTTCTTTGCAT...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGGACAGTGGCCTCACTaGCAGGAAGCCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPGQWPH*QEAQVL
Trigger: CAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTCC...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATACGATCTCGGCTCACTaGAACCTCCGCCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINTISAH*NLRLPD
Trigger: ATCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGT...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGATCTCGGCTCACTaGAACCTCCGCCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGTISAH*NLRLPD
Trigger: ATCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGT...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTCCTTACAGGCAGAGCTaGAGCTCCCTCGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTPYRQS*SSLASR
Trigger: GCGAGAGGCGAGGGAGCTCCAGCTCTGCCTGTAAGG...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282120.6
CDS-3UTR CCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATGCCGTTGGCTCAAGCTaGGGTGGGTGGAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINAVGSS*GGWRRF
Trigger: GAAACGTCTCCACCCACCCCAGCTTGAGCCAACGGC...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCGCCAGTGCTGTCTTTTaGAGTCTGCAGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: KGECNSNSNRIPRISHCCASAVF*SLQLRM
Trigger: CATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGC...GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp GCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGGCAACCGGGAAGGCTGCTCTaGAACCACCTTGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: ATATATASPESATAASWQPGRLL*NHLVRA
Trigger: AGCCCTAACAAGGTGGTTCCAGAGCAGCCTTCCCGG...TTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCGGGTGCATACGAAGGTaGATGGAAAGGAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAGCIRR*MERSWY
Trigger: GTACCAGCTCCTTTCCATCCACCTTCGTATGCACCC...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGAGAGGGGCTGGCTTACTaGCAGTTTGACATACTATAC +
Preference number: 4 (lower is better)
Translates to: KGTDGHPTGGALARLGCREGLAY*QFDILY
Trigger: GTATAGTATGTCAAACTGCCAGTAAGCCAGCCCCTC...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCCTGCGGGGGAGAAATaGGGTCAGTTTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPPAGEK*GQFPPQ
Trigger: CTGGGGAGGAAACTGACCTCATTTCTCCCCCGCAGG...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGCTCTTCTTTGGGCGGTaGGCCCTCCTCGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKLFFGR*ALLGSC
Trigger: ACAGGACCCGAGGAGGGCTCACCGCCCAAAGAAGAG...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTCTCTTCTTTGGGCGGTaGGCCCTCCTCGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFLFFGR*ALLGSC
Trigger: ACAGGACCCGAGGAGGGCTCACCGCCCAAAGAAGAG...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAGAGAGGCCTGGCTTTaGGGGCCTCTTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTREAWL*GPLHHQ
Trigger: CTGGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCT...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAAAACAAACTGGGCCCTaGCGAAACAGGCGGATTGGG +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPKQTGP*RNRRIG
Trigger: CCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTT...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCAGCTCTGTGGACTCCGTaGCAAAATGTACGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPALWTP*QNVRVH
Trigger: GTGGACGCGTACATTTTGTCACGGAGTCCACAGAGC...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGACCACGAACCGCATCCTaGTCGGATAGCGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGPRTAS*SDSASA
Trigger: GGCGGAAGCGCTATCCGAGCAGGATGCGGTTCGTGG...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGACTCCAGCTTCTTCTTaGTTGACGCTTTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQTPASS*LTLSVA
Trigger: GGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGT...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTGTCTGCAGCTCCGGATaGGACTTACTAGTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RANATATATASPESATAAVCSSG*DLLVLS
Trigger: AGACAGCACTAGTAAGTCGCATCCGGAGCTGCAGAC...AGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCCGTCTATTGGGCCCTaGTCCTCTGCACCGGACTTG +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYPSIGP*SSAPDL
Trigger: CAAGTCCGGTGCAGAGGAGCAGGGCCCAATAGACGG...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGGGCTGCTCTCCGCGCTaGCATTTCCAGAACCGTTCG +
Preference number: 4 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQGCSPR*HFQNRS
Trigger: CGAACGGTTCTGGAAATGGCAGCGCGGAGAGCAGCC...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTGGCTGCTCTCCGCGCTaGCATTTCCAGAACCGTTCG +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTGCSPR*HFQNRS
Trigger: CGAACGGTTCTGGAAATGGCAGCGCGGAGAGCAGCC...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATGCAAAGAAGTGGCTaGTCTCCGCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSMQRSG*SPRCHF
Trigger: GAAATGGCAGCGCGGAGAGCAGCCACTTCTTTGCAT...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGGCAGCCCCCTACCTCTaGCAGCCCAGACCCGCCACT +
Preference number: 4 (lower is better)
Translates to: LSLKSLVFLGRPERHQILAAPYL*QPRPAT
Trigger: AGTGGCGGGTCTGGGCTGGCAGAGGTAGGGGGCTGC...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGGCAGCCCCCTACCTCTaGCAGCCCAGACCCGCCACT +
Preference number: 4 (lower is better)
Translates to: RHQILTALFCSSSEMSGMAAPYL*QPRPAT
Trigger: AGTGGCGGGTCTGGGCTGGCAGAGGTAGGGGGCTGC...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGACAGTGGCCTCACTaGCAGGAAGCCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDGQWPH*QEAQVL
Trigger: CAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTCC...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCTTGGCCAGGTTGGGATaGAGAGAAAAACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPALARLG*REKQAG
Trigger: TCCTGCCTGTTTTTCTCTGCATCCCAACCTGGCCAA...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTACGATCTCGGCTCACTaGAACCTCCGCCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTTISAH*NLRLPD
Trigger: ATCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGT...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTGCCGTTGGCTCAAGCTaGGGTGGGTGGAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTAVGSS*GGWRRF
Trigger: GAAACGTCTCCACCCACCCCAGCTTGAGCCAACGGC...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCGCCAGTGCTGTCTTTTaGAGTCTGCAGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCASAVF*SLQLRM
Trigger: CATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGC...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGGTTAGAGCCGTCTTTTaGAGTCTGCTTCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQVRAVF*SLLLRT
Trigger: GGTGCGGAGAAGCAGACTCCAAAAGACGGCTCTAAC...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCCCGGGAAGGCTGCTCTaGAACCACCTTGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLPGRLL*NHLVRA
Trigger: AGCCCTAACAAGGTGGTTCCAGAGCAGCCTTCCCGG...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGAGATGGGCTTGGAATaGTCTTTCCGGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPEMGLE*SFREGC
Trigger: GCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTC...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGGCAAGAGATGGGCTTGGAATaGTCTTTCCGGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ATATATASPESATAASWQEMGLE*SFREGC
Trigger: GCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTC...TTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp GGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCTTTCTTTCTCTTCTTTaGGCGGTGAGCCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GECNSNSNRIPRISHCCFFLSLL*AVSPPR
Trigger: CCGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAA...GAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp AGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTCTTCACGGTTCTCACTaGAGGCAGAACCGGACATCT +
Preference number: 4 (lower is better)
Translates to: RANATATATASPESATAALHGSH*RQNRTS
Trigger: AGATGTCCGGTTCTGCCTCCAGTGAGAACCGTGAAG...AGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGTAGTCACTGGCCTTTaGCCGCCGGGTGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPVVTGL*PPGDFR
Trigger: TCTAAAGTCACCCGGCGGCCAAAGGCCAGTGACTAC...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CCCAGAATCAGCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCAGTAGTCACTGGCCTTTaGCCGCCGGGTGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: PRISHCCFMANASPLLGPVVTGL*PPGDFR
Trigger: TCTAAAGTCACCCGGCGGCCAAAGGCCAGTGACTAC...TGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCGCAGCCTGCCCAGGCTaGGATCTCCCTTTGGTCATA +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLAACPG*DLPLVI
Trigger: TATGACCAAAGGGAGATCCCAGCCTGGGCAGGCTGC...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGAGAAACATGGGAAGCTaGAAAGTCGAGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQRNMGS*KVEGTA
Trigger: GGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCT...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCCAGGTTGGAGTTCAGTaGCACGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CFHIPLHSPSEEERMEATQVGVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCGTGCCACTGAACTCCAACCTG...GGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCCACGCCCATAGCATCTaGCATCAGGTTACCCTGTAC +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSHAHSI*HQVTLY
Trigger: GTACAGGGTAACCTGATGCCAGATGCTATGGGCGTG...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATACAGAGGGTGAGGGGCTaGCTTACTGGCAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: HIPLHSPSEEERMEATSIQRVRG*LTGSLT
Trigger: TGTCAAACTGCCAGTAAGCCAGCCCCTCACCCTCTG...TATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCCAGAATCAGCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCCCTCCCATGGACCTaGCTCCTCCTTCCTTACCTT +
Preference number: 4 (lower is better)
Translates to: PRISHCCFMANASPLLGPSLPWT*LLLPYL
Trigger: AAGGTAAGGAAGGAGGAGCCAGGTCCATGGGAGGGA...TGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGTTAGGGGGCAGCTGCTaGTGTCGGCGCTCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: RHQILTALFCSSSEMSGMLGGSC*CRRSPS
Trigger: CGAAGGCGAGCGCCGACATCAGCAGCTGCCCCCTAA...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR TCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCACAGCTTCTTCTTGCTTaGCGCTTTCGGTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPQLLLA*RFRWPR
Trigger: TCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTG...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAAAACAAACTGGGCCCTaGCGAAACAGGCGGATTGGG +
Preference number: 4 (lower is better)
Translates to: PLHSPSEEERMEATSINKKQTGP*RNRRIG
Trigger: CCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTT...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGCTCTCAGTCTCCCGCTaGCGCCAAGACGAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RHQILTALFCSSSEMSGMLSVSR*RQDEGR
Trigger: CCGCCCTTCGTCTTGGCGGCAGCGGGAGACTGAGAG...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR GCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTAGGTGGAGACGTTTCCTaGAGAAGGCCGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLGGDVS*RRPYSS
Trigger: GCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACC...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCAGGTGGAGACGTTTCCTaGAGAAGGCCGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAGGDVS*RRPYSS
Trigger: GCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACC...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAGTCTGCGGCTCCGGATaGGACTTGGTAGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLVCGSG*DLVEPP
Trigger: TGGAGGCTCTACCAAGTCGCATCCGGAGCCGCAGAC...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTATGGGCCCTGCTCCTCTaGACCGGACTTGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLWALLL*TGLVRA
Trigger: GGCTCTAACAAGTCCGGTGCAGAGGAGCAGGGCCCA...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTACCGTCTATTGGGCCCTaGTCCTCTGCACCGGACTTG +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLPSIGP*SSAPDL
Trigger: CAAGTCCGGTGCAGAGGAGCAGGGCCCAATAGACGG...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTCCGTCTATTGGGCCCTaGTCCTCTGCACCGGACTTG +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFPSIGP*SSAPDL
Trigger: CAAGTCCGGTGCAGAGGAGCAGGGCCCAATAGACGG...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCAATGCAAAGAAGTGGCTaGTCTCCGCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: ANATATATASPESATAASMQRSG*SPRCHF
Trigger: GAAATGGCAGCGCGGAGAGCAGCCACTTCTTTGCAT...TGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAGTCAGCAGCGCAGCCTaGCCAGGCTGGGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEVSSAA*PGWDLP
Trigger: AGGGAGATCCCAGCCTGGGCAGGCTGCGCTGCTGAC...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATATCTCCCCAGGACTCTTaGTCAAGCAAGTCACGCCAA +
Preference number: 4 (lower is better)
Translates to: HIPLHSPSEEERMEATSISPQDS*SSKSRQ
Trigger: TTGGCGTGACTTGCTTGAGCAAGAGTCCTGGGGAGA...TATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AAAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTGCTTCATGGCAAATaGAAGCCCACTACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KGRMQQQQQPHPQNQPLLLLHGK*KPTTGS
Trigger: GGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAG...CAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAGCCGTTGGCTCAAGCTaGGGTGGGTGGAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLAVGSS*GGWRRF
Trigger: GAAACGTCTCCACCCACCCCAGCTTGAGCCAACGGC...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATGCCAGTGCTGTCTTTTaGAGTCTGCAGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINASAVF*SLQLRM
Trigger: CATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGC...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCAGTTAGAGCCGTCTTTTaGAGTCTGCTTCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: ANATATATASPESATAASVRAVF*SLLLRT
Trigger: GGTGCGGAGAAGCAGACTCCAAAAGACGGCTCTAAC...TGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGGCTGGGCCCGTCTATTaGGCCCTGCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: HQILTALFCSSSEMSGMMAGPVY*ALLLCT
Trigger: GGTGCAGAGGAGCAGGGCCCAATAGACGGGCCCAGC...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGGCTGGGCCCGTCTATTaGGCCCTGCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LSLKSLVFLGRPERHQILAGPVY*ALLLCT
Trigger: GGTGCAGAGGAGCAGGGCCCAATAGACGGGCCCAGC...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAGCTGGGCCCGTCTATTaGGCCCTGCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEAGPVY*ALLLCT
Trigger: GGTGCAGAGGAGCAGGGCCCAATAGACGGGCCCAGC...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCCGGGAAGGCTGCTCTaGAACCACCTTGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYPGRLL*NHLVRA
Trigger: AGCCCTAACAAGGTGGTTCCAGAGCAGCCTTCCCGG...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGGCAAGGTTGGAGATGGGCTTaGAATGGTCTTTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: ATATATASPESATAASWQGWRWA*NGLSGK
Trigger: CTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACC...TTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp AAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCCAGAAGGGTTGGAGATaGGCTTGGAATGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KGECNSNSNRIPRISHCCQKGWR*AWNGLS
Trigger: GGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTG...GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCACCTTTGTCAGCAAGCTaGTTTGTGTCAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPPLSAS*FVSALG
Trigger: CCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGG...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCTTTCTTTCTCTTCTTTaGGCGGTGAGCCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCFLSLL*AVSPPR
Trigger: CCGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAA...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGACTTCACGGTTCTCACTaGAGGCAGAACCGGACATCT +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGLHGSH*RQNRTS
Trigger: AGATGTCCGGTTCTGCCTCCAGTGAGAACCGTGAAG...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCTTCACGGTTCTCACTaGAGGCAGAACCGGACATCT +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCLHGSH*RQNRTS
Trigger: AGATGTCCGGTTCTGCCTCCAGTGAGAACCGTGAAG...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAAGATATGCAAAGAAGTaGCTGCTCTCCGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPRYAKK*LLSALP
Trigger: TGGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCT...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp TGGAGCGCTGGCAGAATGCAGAAAGCTCAGGACTGGGAGACTAGGGAGTTGCTAAGATATGCAAAGAAGTaGCTGCTCTCCGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WSAGRMQKAQDWETRELLRYAKK*LLSALP
Trigger: TGGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCT...TAGCAACTCCCTAGTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCGCATACGAAGGTGGATaGAAAGGAGCTGGTACAGAT +
Preference number: 4 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAAYEGG*KGAGTD
Trigger: ATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGC...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCAGAAACATGGGAAGCTaGAAAGTCGAGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: EETVKGIERPGFEGLFTTRNMGS*KVEGTA
Trigger: GGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCT...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGTCAACCATGTGGGGTaGGGTAGTGAGGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPVNHVG*GSEEGV
Trigger: TACACCTTCCTCACTACCCCACCCCACATGGTTGAC...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATCAGGTTGGAGTTCAGTaGCACGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINQVGVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCGTGCCACTGAACTCCAACCTG...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCACAGAAGCACAGGATCTaGTGCCTCACAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPQKHRI*CLTVSS
Trigger: GGAGGAAACTGTGAGGCACCAGATCCTGTGCTTCTG...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCCAGAATCAGCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCAATGCAAGCCCACTACTaGGTCCATCTGACGTTGCCT +
Preference number: 4 (lower is better)
Translates to: PRISHCCFMANASPLLGPMQAHY*VHLTLP
Trigger: AGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCAT...TGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp GCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGGCAAGCCACTGCTGCTTCATaGCAAATGCAAGCCCACTAC +
Preference number: 4 (lower is better)
Translates to: ATATATASPESATAASWQATAAS*QMQAHY
Trigger: GTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGC...TTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp AAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCCAGAAAGCTCAGGACTaGGAGACTAGGGAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: KGECNSNSNRIPRISHCCQKAQD*ETRELL
Trigger: TAGCAACTCCCTAGTCTCCCAGTCCTGAGCTTTCTG...GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp ACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCCAGACAGCACAATCCATTGGTaGCGTTCATCTTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TKVQVQSPKQPPTSASPDSTIHW*RSSFSR
Trigger: TCTGGAAAAAGATGAACGTCACCAATGGATTGTGCT...GTCTGGGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCTCTGCCAGAAGGAACTaGACTCTGGAAGTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCSARRN*TLEVLR
Trigger: CCTTAGGACTTCCAGAGTTCAGTTCCTTCTGGCAGA...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAGTGGGACCCCTCATTTaGGTCACATCCATATGGCAT +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGVGPLI*VTSIWH
Trigger: ATGCCATATGGATGTGACTCAAATGAGGGGTCCCAC...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp AAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCCTATTTCCTCATCTGTaGAGGGAGGTAGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: KGECNSNSNRIPRISHCCLFPHL*REVAAV
Trigger: TACAGCAGCTACCTCCCTTCACAGATGAGGAAATAG...GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGCCACGAACCGCATCCTaGTCGGATAGCGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: RHQILTALFCSSSEMSGMPRTAS*SDSASA
Trigger: GGCGGAAGCGCTATCCGAGCAGGATGCGGTTCGTGG...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCACTCCAGCTTCTTCTTaGTTGACGCTTTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLTPASS*LTLSVA
Trigger: GGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGT...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCGTCTGCAGCTCCGGATaGGACTTACTAGTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLVCSSG*DLLVLS
Trigger: AGACAGCACTAGTAAGTCGCATCCGGAGCTGCAGAC...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CTATTAAAGTTTATGGAGCGCTGGCAGAATGCAGAAAGCTCAGGACTGGGAGACTGGGCCCTGCTCCTCTaGACCGGACTTGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: LLKFMERWQNAESSGLGDWALLL*TGLVRA
Trigger: GGCTCTAACAAGTCCGGTGCAGAGGAGCAGGGCCCA...GTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCATAAACTTTAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp GCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGGCAATCTTTCCGGGAAGGCTaGTCTGGAACCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: ATATATASPESATAASWQSFREG*SGTTLL
Trigger: TAACAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGA...TTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAATGCAAAGAAGTGGCTaGTCTCCGCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: PLHSPSEEERMEATSINKMQRSG*SPRCHF
Trigger: GAAATGGCAGCGCGGAGAGCAGCCACTTCTTTGCAT...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCTGCAGTCACCAGATATaGAAAGAAGTGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSCSHQI*KEVAAL
Trigger: GAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCA...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTTCACCAAAGTGCAGGTaGAAAGCCCAAAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPSPKCR*KAQSSP
Trigger: GGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGA...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTTCACCAAAGTGCAGGTaGAAAGCCCAAAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTSPKCR*KAQSSP
Trigger: GGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGA...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCACAGTGCAGAGTGCAATaGCACAGTCAAGGACCAACT +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPQCRVQ*HSQGPT
Trigger: AGTTGGTCCTTGACTGTGGCATTGCACTCTGCACTG...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGGGACAGTGGCCTCACTaGCAGGAAGCCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKGQWPH*QEAQVL
Trigger: CAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTCC...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCCAGATAGGAAAGCATTaGCAAGGGCTGTCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: EETVKGIERPGFEGLFTTQIGKH*QGLSLK
Trigger: CTTGAGGGACAGCCCTTGGCAATGCTTTCCTATCTG...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTCTAAAAAGGGCGAATaGAACAGCAACAGCAACCGC +
Preference number: 4 (lower is better)
Translates to: KGECNSNSNRIPRISHCCSKKGE*NSNSNR
Trigger: GCGGTTGCTGTTGCTGTTGCATTCGCCCTTTTTAGA...GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGCTTACTGTCGCCGAGTaGGAGGCGAGCCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKLTVAE*EASLFF
Trigger: GAAGAAGAGGCTCGCCTCCCACTCGGCGACAGTAAG...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR CCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGGCCAGTGCTGTCTTTTaGAGTCTGCAGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQASAVF*SLQLRM
Trigger: CATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGC...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCGTTAGAGCCGTCTTTTaGAGTCTGCTTCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLVRAVF*SLLLRT
Trigger: GGTGCGGAGAAGCAGACTCCAAAAGACGGCTCTAAC...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CCAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGAGATGGGCTTGGAATaGTCTTTCCGGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PKKHGKLESRGHSRNKGTEMGLE*SFREGC
Trigger: GCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTC...TGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR CCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAGGTTTGTGTCAGCCTTaGGGAGCTCCTTGTTATCAG +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGGLCQP*GAPCYQ
Trigger: CTGATAACAAGGAGCTCCCCAAGGCTGACACAAACC...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATTTTCTTTCTCTTCTTTaGGCGGTGAGCCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINFLSLL*AVSPPR
Trigger: CCGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAA...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGACCTTCTCGCTACCCGTaGAATCCGAAAGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGPSRYP*NPKVSL
Trigger: AAGGGACACTTTCGGATTCCACGGGTAGCGAGAAGG...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGACCTTCTCGCTACCCGTaGAATCCGAAAGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGPSRYP*NPKVSL
Trigger: AAGGGACACTTTCGGATTCCACGGGTAGCGAGAAGG...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATCCTTCTCGCTACCCGTaGAATCCGAAAGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDPSRYP*NPKVSL
Trigger: AAGGGACACTTTCGGATTCCACGGGTAGCGAGAAGG...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATCCTTCTCGCTACCCGTaGAATCCGAAAGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RMQQQQQPHPQNQPLLLHPSRYP*NPKVSL
Trigger: AAGGGACACTTTCGGATTCCACGGGTAGCGAGAAGG...ATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCGGACAGCCACAAGAATaGCTGCAGTCACCAGATATG +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCGQPQE*LQSPDM
Trigger: CATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCC...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CCCAGAATCAGCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCAGGACAGCCACAAGAATaGCTGCAGTCACCAGATATG +
Preference number: 4 (lower is better)
Translates to: PRISHCCFMANASPLLGPGQPQE*LQSPDM
Trigger: CATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCC...TGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTGTAGTCACTGGCCTTTaGCCGCCGGGTGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTVVTGL*PPGDFR
Trigger: TCTAAAGTCACCCGGCGGCCAAAGGCCAGTGACTAC...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GAAAAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATGGGCAGCAGCCTGCCCAGGCTaGGATCTCCCTTTGGTCATA +
Preference number: 4 (lower is better)
Translates to: EKSGCIRRWMERSWYRWAAACPG*DLPLVI
Trigger: TATGACCAAAGGGAGATCCCAGCCTGGGCAGGCTGC...TGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCATGGATGGAAAGGAGCTaGTACAGATGGGCACAACCA +
Preference number: 4 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPWMERS*YRWAQP
Trigger: TGGTTGTGCCCATCTGTACCAGCTCCTTTCCATCCA...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAGCCAAGACAAAGACTTaGGAATCACTCACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGAKTKT*ESLTPR
Trigger: CCTCGGAGTGAGTGATTCCCAAGTCTTTGTCTTGGC...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAGAAACATGGGAAGCTaGAAAGTCGAGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINRNMGS*KVEGTA
Trigger: GGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCT...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCATATGAGGAAACAAACTaGGCCCTGACGAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPYEETN*ALTKQA
Trigger: CGCCTGTTTCGTCAGGGCCCAGTTTGTTTCCTCATA...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGTCAACCATGTGGGGTaGGGTAGTGAGGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDVNHVG*GSEEGV
Trigger: TACACCTTCCTCACTACCCCACCCCACATGGTTGAC...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAAAAGAGTCAACCATGTaGGGTGGGGTAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPKESTM*GGVVRK
Trigger: CTTCCTCACTACCCCACCCCACATGGTTGACTCTTT...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAAGCCAGGAAAAGCTGTaGGACCCCTCATTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPSQEKL*DPSFES
Trigger: TGACTCAAATGAGGGGTCCCACAGCTTTTCCTGGCT...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCAGGTTGGAGTTCAGTaGCACGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPQVGVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCGTGCCACTGAACTCCAACCTG...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCACCTTTCTACACAGACTaGCCTTCAACTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPPFYTD*PSTSPE
Trigger: CTCAGGGGAAGTTGAAGGCCAGTCTGTGTAGAAAGG...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCACAGAGGGTGAGGGGCTaGCTTACTGGCAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAQRVRG*LTGSLT
Trigger: TGTCAAACTGCCAGTAAGCCAGCCCCTCACCCTCTG...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTGGGTTCTTTAGGTTAGGGGGCAGCTGCTaGTGTCGGCGCTCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: FNDNQAELFDTSRTGFFRLGGSC*CRRSPS
Trigger: CGAAGGCGAGCGCCGACATCAGCAGCTGCCCCCTAA...CCTAAAGAACCCAGTTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR TCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACAGCTTCTTCTTGCTTaGCGCTTTCGGTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLQLLLA*RFRWPR
Trigger: TCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTG...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAATCCTCAGTAGGCTCTaGAGACTTAACTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPILSRL*RLNFLL
Trigger: CAGGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGAT...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CCCAGAATCAGCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCAATCCTCAGTAGGCTCTaGAGACTTAACTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PRISHCCFMANASPLLGPILSRL*RLNFLL
Trigger: CAGGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGAT...TGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCCCAGGACAAAAGCAATaGTCTTCCGCTTGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSPGQKQ*SSACCD
Trigger: ATCACAACAAGCGGAAGATCATTGCTTTTGTCCTGG...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACAGTCTTTCCAAGAGTaGGCTCCTTTCCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPQSFQE*APFQEA
Trigger: AGCTTCTTGGAAAGGAGCTCACTCTTGGAAAGACTG...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCCAGTCTTTCCAAGAGTaGGCTCCTTTCCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CFHIPLHSPSEEERMEATQSFQE*APFQEA
Trigger: AGCTTCTTGGAAAGGAGCTCACTCTTGGAAAGACTG...GGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGACAGTCTTTCCAAGAGTaGGCTCCTTTCCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGQSFQE*APFQEA
Trigger: AGCTTCTTGGAAAGGAGCTCACTCTTGGAAAGACTG...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGGGATTCTCTAAGCCTTaGGAAGTTCACACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQGFSKP*EVHTKA
Trigger: AGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATCC...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGATCTGCCAGAAGGAACTaGACTCTGGAAGTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGSARRN*TLEVLR
Trigger: CCTTAGGACTTCCAGAGTTCAGTTCCTTCTGGCAGA...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CTAAAAAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTACTACTGGGTCCATCTaGCGTTGCCTATCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: LKRANATATATASPESATTTGSI*RCLSLL
Trigger: TAGGAGGGATAGGCAACGTCAGATGGACCCAGTAGT...AGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTGTCTGCAGCTCCGGATaGGACTTACTAGTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPVCSSG*DLLVLS
Trigger: AGACAGCACTAGTAAGTCGCATCCGGAGCTGCAGAC...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATTCTTTCCGGGAAGGCTaGTCTGGAACCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINSFREG*SGTTLL
Trigger: TAACAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGA...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGGGCTGCTCTCCGCGCTaGCATTTCCAGAACCGTTCG +
Preference number: 4 (lower is better)
Translates to: LSLKSLVFLGRPERHQILGCSPR*HFQNRS
Trigger: CGAACGGTTCTGGAAATGGCAGCGCGGAGAGCAGCC...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATTCACCAAAGTGCAGGTaGAAAGCCCAAAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHSPKCR*KAQSSP
Trigger: GGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGA...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HIPLHSPSEEERMEATSITMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...TATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCAACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPTMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATCAGTGCAGAGTGCAATaGCACAGTCAAGGACCAACT +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINQCRVQ*HSQGPT
Trigger: AGTTGGTCCTTGACTGTGGCATTGCACTCTGCACTG...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCCAGTGCAGAGTGCAATaGCACAGTCAAGGACCAACT +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLQCRVQ*HSQGPT
Trigger: AGTTGGTCCTTGACTGTGGCATTGCACTCTGCACTG...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCTGCAGAGAGAAACAGTaGAGAGTGCAATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: EETVKGIERPGFEGLFTTCREKQ*RVQCHS
Trigger: ACTGTGGCATTGCACTCTGCACTGTTTCTCTCTGCA...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCATGCAGAGAGAAACAGTaGAGAGTGCAATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPCREKQ*RVQCHS
Trigger: ACTGTGGCATTGCACTCTGCACTGTTTCTCTCTGCA...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAAATGGGCTGGGGGTGTaGAATAAGAGAAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGNGLGV*NKRSKE
Trigger: TTCCTTGCTTCTCTTATTGCACACCCCCAGCCCATT...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAATTGGCCAGGTTGGGATaGAGAGAAAAACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PLHSPSEEERMEATSINKLARLG*REKQAG
Trigger: TCCTGCCTGTTTTTCTCTGCATCCCAACCTGGCCAA...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATCAGATAGGAAAGCATTaGCAAGGGCTGTCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDQIGKH*QGLSLK
Trigger: CTTGAGGGACAGCCCTTGGCAATGCTTTCCTATCTG...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCTTCAAGCAATTCTCCTaGCTCAGCCTATCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSFKQFS*LSLSSS
Trigger: GCTACTAGATAGGCTGAGGCAGGAGAATTGCTTGAA...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGTCTCCCCAGGACTCTTaGTCAAGCAAGTCACGCCAA +
Preference number: 4 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQSPQDS*SSKSRQ
Trigger: TTGGCGTGACTTGCTTGAGCAAGAGTCCTGGGGAGA...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp TCAGCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGAGAATCAGCCACTGCTaGTTCATGGCAAATGCAAGC +
Preference number: 4 (lower is better)
Translates to: SATAASWQMQAHYWVHLTRISHC*FMANAS
Trigger: GCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCT...CGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCAGTTAGAGCCGTCTTTTaGAGTCTGCTTCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAVRAVF*SLLLRT
Trigger: GGTGCGGAGAAGCAGACTCCAAAAGACGGCTCTAAC...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTGTTAGAGCCGTCTTTTaGAGTCTGCTTCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPVRAVF*SLLLRT
Trigger: GGTGCGGAGAAGCAGACTCCAAAAGACGGCTCTAAC...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCAGGTTGGAGATGGGCTTaGAATGGTCTTTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAGWRWA*NGLSGK
Trigger: CTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACC...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGACAGAAGGGTTGGAGATaGGCTTGGAATGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGQKGWR*AWNGLS
Trigger: GGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTG...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCCTTTGTCAGCAAGCTaGTTTGTGTCAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYPLSAS*FVSALG
Trigger: CCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGG...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CTAAAAAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTCCTTTGTCAGCAAGCTaGTTTGTGTCAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LKRANATATATASPESATPLSAS*FVSALG
Trigger: CCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGG...AGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTATTTCTTTCTCTTCTTTaGGCGGTGAGCCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLFLSLL*AVSPPR
Trigger: CCGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAA...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCACTTCACGGTTCTCACTaGAGGCAGAACCGGACATCT +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSALHGSH*RQNRTS
Trigger: AGATGTCCGGTTCTGCCTCCAGTGAGAACCGTGAAG...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCACCTTCTCGCTACCCGTaGAATCCGAAAGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAPSRYP*NPKVSL
Trigger: AAGGGACACTTTCGGATTCCACGGGTAGCGAGAAGG...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACAGATATGCAAAGAAGTaGCTGCTCTCCGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYRYAKK*LLSALP
Trigger: TGGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCT...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAGTAGTCACTGGCCTTTaGCCGCCGGGTGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLVVTGL*PPGDFR
Trigger: TCTAAAGTCACCCGGCGGCCAAAGGCCAGTGACTAC...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAAGGAGCTGGTACAGATaGGCACAACCAGAAAACATG +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPRSWYR*AQPENM
Trigger: CATGTTTTCTGGTTGTGCCCATCTGTACCAGCTCCT...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTGGGTGCATACGAAGGTaGATGGAAAGGAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTGCIRR*MERSWY
Trigger: GTACCAGCTCCTTTCCATCCACCTTCGTATGCACCC...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCTAACCAAAGAAACATaGGAAGCTGGAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQLTKET*EAGKSR
Trigger: CCTCGACTTTCCAGCTTCCCATGTTTCTTTGGTTAG...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAATATGAGGAAACAAACTaGGCCCTGACGAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: PLHSPSEEERMEATSINKYEETN*ALTKQA
Trigger: CGCCTGTTTCGTCAGGGCCCAGTTTGTTTCCTCATA...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTAGGAGTCTCGCTCTATTaGCAGGTTGGAGTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLGVSLY*QVGVQW
Trigger: CCACTGAACTCCAACCTGCCAATAGAGCGAGACTCC...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAACACTGGAAGCCATCATaGGAGTACTATGTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PLHSPSEEERMEATSINKHWKPS*EYYVRA
Trigger: CGCTCTGACATAGTACTCCCATGATGGCTTCCAGTG...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTCAGAAGCACAGGATCTaGTGCCTCACAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTQKHRI*CLTVSS
Trigger: GGAGGAAACTGTGAGGCACCAGATCCTGTGCTTCTG...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCTCGGTTTTGAAAGCATaGGGAGAAAGCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: CFHIPLHSPSEEERMEATSVLKA*GESFPL
Trigger: CAAAGGGAAGCTTTCTCCTCATGCTTTCAAAACCGA...GGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGACCCCAGATTCGGTTTTaGAAGCATGAGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGPQIRF*KHEEKA
Trigger: AGCTTTCTCCTCATGCTTTCAAAACCGAATCTGGGG...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR TCA 90 bp GCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGTTGCCTATCCCTCCCCAGATTCGGTTTTaGAAGCATGAGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: ASWQMQAHYWVHLTLPIPPQIRF*KHEEKA
Trigger: AGCTTTCTCCTCATGCTTTCAAAACCGAATCTGGGG...AGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGGACAAAAGCAATaGTCTTCCGCTTGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPPGQKQ*SSACCD
Trigger: ATCACAACAAGCGGAAGATCATTGCTTTTGTCCTGG...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTAGTGAGGAAGGTGTATaGGGAAACAAACTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPSEEGV*GNKLGP
Trigger: AGGGCCCAGTTTGTTTCCTCATACACCTTCCTCACT...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAGGCTTACTGGCAGTTTaGCATACTATACAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGGLLAV*HTIQLR
Trigger: TCTGAGCTGTATAGTATGTCAAACTGCCAGTAAGCC...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAACTCCAGCTTCTTCTTaGTTGACGCTTTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLTPASS*LTLSVA
Trigger: GGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGT...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGACTCCAGCTTCTTCTTaGTTGACGCTTTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKTPASS*LTLSVA
Trigger: GGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGT...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGGGTGGAGACGTTTCCTaGAGAAGGCCGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKGGDVS*RRPYSS
Trigger: GCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACC...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGGTCTGCAGCTCCGGATaGGACTTACTAGTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKVCSSG*DLLVLS
Trigger: AGACAGCACTAGTAAGTCGCATCCGGAGCTGCAGAC...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTATCTTTCCGGGAAGGCTaGTCTGGAACCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLSFREG*SGTTLL
Trigger: TAACAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGA...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACTCTTTCCGGGAAGGCTaGTCTGGAACCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYSFREG*SGTTLL
Trigger: TAACAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGA...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATATGCAAAGAAGTGGCTaGTCTCCGCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHMQRSG*SPRCHF
Trigger: GAAATGGCAGCGCGGAGAGCAGCCACTTCTTTGCAT...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAAGCCACAAGAATGGCTaGAGTCACCAGATATGCAAA +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPSHKNG*SHQICK
Trigger: TTTGCATATCTGGTGACTGCAGCCATTCTTGTGGCT...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAAGCAGCCCCCTACCTCTaGCAGCCCAGACCCGCCACT +
Preference number: 4 (lower is better)
Translates to: REKFLSMTTKLNYSIPAEAAPYL*QPRPAT
Trigger: AGTGGCGGGTCTGGGCTGGCAGAGGTAGGGGGCTGC...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGTMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCGTCAGCAGCGCAGCCTaGCCAGGCTGGGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: VHTKASDQGKYFGKISLSVSSAA*PGWDLP
Trigger: AGGGAGATCCCAGCCTGGGCAGGCTGCGCTGCTGAC...GGAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTCAGTGCAGAGTGCAATaGCACAGTCAAGGACCAACT +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTQCRVQ*HSQGPT
Trigger: AGTTGGTCCTTGACTGTGGCATTGCACTCTGCACTG...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATTGCAGAGAGAAACAGTaGAGAGTGCAATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDCREKQ*RVQCHS
Trigger: ACTGTGGCATTGCACTCTGCACTGTTTCTCTCTGCA...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAGGACAGTGGCCTCACTaGCAGGAAGCCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEGQWPH*QEAQVL
Trigger: CAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTCC...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTTTGGCCAGGTTGGGATaGAGAGAAAAACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPLARLG*REKQAG
Trigger: TCCTGCCTGTTTTTCTCTGCATCCCAACCTGGCCAA...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCACATCAGATCCTGACTaGCCTGTTTTGCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCTSDPD*PVLLKF
Trigger: GAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGT...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTCAGATAGGAAAGCATTaGCAAGGGCTGTCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTQIGKH*QGLSLK
Trigger: CTTGAGGGACAGCCCTTGGCAATGCTTTCCTATCTG...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAAGGTGCACGTCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGRCTSP*PANFCI
Trigger: AATACAAAAATTAGCCGGGCATGGTGACGTGCACCT...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAAGGTGCACGTCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPRCTSP*PANFCI
Trigger: AATACAAAAATTAGCCGGGCATGGTGACGTGCACCT...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGTTTCCTCCATGCTaGAATGCTCTAGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCQFPPC*NALVLI
Trigger: GATGAGAACTAGAGCATTGCAGCATGGAGGAAACTG...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCTCACAGTTTCCTCCATaGTGCAATGCTCTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: EETVKGIERPGFEGLFTTSQFPP*CNALVL
Trigger: GAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGA...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGCTTACTGTCGCCGAGTaGGAGGCGAGCCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HQILTALFCSSSEMSGMMLTVAE*EASLFF
Trigger: GAAGAAGAGGCTCGCCTCCCACTCGGCGACAGTAAG...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAAAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATGGGCAGTTAGAGCCGTCTTTTaGAGTCTGCTTCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: EKSGCIRRWMERSWYRWAVRAVF*SLLLRT
Trigger: GGTGCGGAGAAGCAGACTCCAAAAGACGGCTCTAAC...TGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTGGTTGGAGATGGGCTTaGAATGGTCTTTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFGWRWA*NGLSGK
Trigger: CTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACC...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACAGAAGGGTTGGAGATaGGCTTGGAATGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLQKGWR*AWNGLS
Trigger: GGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTG...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGCCTTTGTCAGCAAGCTaGTTTGTGTCAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKPLSAS*FVSALG
Trigger: CCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGG...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCAGGAGCTGGTACAGATaGGCACAACCAGAAAACATG +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLRSWYR*AQPENM
Trigger: CATGTTTTCTGGTTGTGCCCATCTGTACCAGCTCCT...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTGGGTGCATACGAAGGTaGATGGAAAGGAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFGCIRR*MERSWY
Trigger: GTACCAGCTCCTTTCCATCCACCTTCGTATGCACCC...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCGGGAACAGAAAAATCTaGGTGCATACGAAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: CFHIPLHSPSEEERMEATGNRKI*VHTKVD
Trigger: ATCCACCTTCGTATGCACCCAGATTTTTCTGTTCCC...GGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAGGGAACAGAAAAATCTaGGTGCATACGAAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGGNRKI*VHTKVD
Trigger: ATCCACCTTCGTATGCACCCAGATTTTTCTGTTCCC...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTGCCAAGACAAAGACTTaGGAATCACTCACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTAKTKT*ESLTPR
Trigger: CCTCGGAGTGAGTGATTCCCAAGTCTTTGTCTTGGC...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCCTAACCAAAGAAACATaGGAAGCTGGAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: EETVKGIERPGFEGLFTTLTKET*EAGKSR
Trigger: CCTCGACTTTCCAGCTTCCCATGTTTCTTTGGTTAG...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAAAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATGGGCAGTCAACCATGTGGGGTaGGGTAGTGAGGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: EKSGCIRRWMERSWYRWAVNHVG*GSEEGV
Trigger: TACACCTTCCTCACTACCCCACCCCACATGGTTGAC...TGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCAAAAGAGTCAACCATGTaGGGTGGGGTAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAKESTM*GGVVRK
Trigger: CTTCCTCACTACCCCACCCCACATGGTTGACTCTTT...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTAAAAGAGTCAACCATGTaGGGTGGGGTAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLKESTM*GGVVRK
Trigger: CTTCCTCACTACCCCACCCCACATGGTTGACTCTTT...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAAAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATGGGCAGGAGTCTCGCTCTATTaGCAGGTTGGAGTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: EKSGCIRRWMERSWYRWAGVSLY*QVGVQW
Trigger: CCACTGAACTCCAACCTGCCAATAGAGCGAGACTCC...TGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAAAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATGGGCACACGCCCATAGCATCTaGCATCAGGTTACCCTGTAC +
Preference number: 4 (lower is better)
Translates to: EKSGCIRRWMERSWYRWAHAHSI*HQVTLY
Trigger: GTACAGGGTAACCTGATGCCAGATGCTATGGGCGTG...TGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATGAGGGGCTGGCTTACTaGCAGTTTGACATACTATAC +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINEGLAY*QFDILY
Trigger: GTATAGTATGTCAAACTGCCAGTAAGCCAGCCCCTC...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGGCAAAAGTTTATGGAGCGCTaGCAGAATGCAGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ATATATASPESATAASWQKFMER*QNAESS
Trigger: TGAGCTTTCTGCATTCTGCCAGCGCTCCATAAACTT...TTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTCGGTTTTGAAAGCATaGGGAGAAAGCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLSVLKA*GESFPL
Trigger: CAAAGGGAAGCTTTCTCCTCATGCTTTCAAAACCGA...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATTCGGTTTTGAAAGCATaGGGAGAAAGCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RMQQQQQPHPQNQPLLLHSVLKA*GESFPL
Trigger: CAAAGGGAAGCTTTCTCCTCATGCTTTCAAAACCGA...ATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCCCCAGATTCGGTTTTaGAAGCATGAGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYPQIRF*KHEEKA
Trigger: AGCTTTCTCCTCATGCTTTCAAAACCGAATCTGGGG...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTATCCTCAGTAGGCTCTaGAGACTTAACTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTILSRL*RLNFLL
Trigger: CAGGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGAT...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp GCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGTTGCCTATCCCTCCAGGACAAAAGCAATaGTCTTCCGCTTGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: ASWQMQAHYWVHLTLPIPPGQKQ*SSACCD
Trigger: ATCACAACAAGCGGAAGATCATTGCTTTTGTCCTGG...AGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCAGCACAATCCATTGGTaGCGTTCATCTTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCSTIHW*RSSFSR
Trigger: TCTGGAAAAAGATGAACGTCACCAATGGATTGTGCT...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCATCAGACTTACTGCCTTaGCAGCACAGAATTCATCTT +
Preference number: 4 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPSDLLP*QHRIHL
Trigger: AAGATGAATTCTGTGCTGTCAAGGCAGTAAGTCTGA...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCGCTATCCGCCAAGAATaGAAATGTCAACTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCAIRQE*KCQLKA
Trigger: AGCTTTGAGTTGACATTTTCATTCTTGGCGGATAGC...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CCAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACACATCAGTACAGAGAATaGCCCAAGAAGGGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PKKHGKLESRGHSRNKGTHQYRE*PKKGRS
Trigger: ACTCCTACCCTTCTTGGGTCATTCTCTGTACTGATG...TGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATGTGGGACCCCTCATTTaGGTCACATCCATATGGCAT +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHVGPLI*VTSIWH
Trigger: ATGCCATATGGATGTGACTCAAATGAGGGGTCCCAC...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGGCTCTGTGGACTCCGTaGCAAAATGTACGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: HQILTALFCSSSEMSGMMALWTP*QNVRVH
Trigger: GTGGACGCGTACATTTTGTCACGGAGTCCACAGAGC...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAGGCTTACTGGCAGTTTaGCATACTATACAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGGLLAV*HTIQLR
Trigger: TCTGAGCTGTATAGTATGTCAAACTGCCAGTAAGCC...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATATCCTCAGTAGGCTCTaGAGACTTAACTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDILSRL*RLNFLL
Trigger: AAGGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGAT...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398263.6
CDS-3UTR GCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTCTCAGTCTCCCGCTaGCGCCAAGACGAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLLSVSR*RQDEGR
Trigger: CCGCCCTTCGTCTTGGCGGCAGCGGGAGACTGAGAG...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR GCA 90 bp AGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCACGGCTCCCGCCGCTaGGACGTTCAGGAGGACCAA +
Preference number: 4 (lower is better)
Translates to: SSHQSFRPGKIFWKDQSFHGSRR*DVQEDQ
Trigger: TTGGTCCTCCTGAACGTCGCAGCGGCGGGAGCCGTG...GAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCATGCAGTCACCAGATATaGAAAGAAGTGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSACSHQI*KEVAAL
Trigger: GAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCA...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATAGCCACAAGAATGGCTaGAGTCACCAGATATGCAAA +
Preference number: 4 (lower is better)
Translates to: RMQQQQQPHPQNQPLLLHSHKNG*SHQICK
Trigger: TTTGCATATCTGGTGACTGCAGCCATTCTTGTGGCT...ATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTAACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLTMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTCAGTGCAGAGTGCAATaGCACAGTCAAGGACCAACT +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFQCRVQ*HSQGPT
Trigger: AGTTGGTCCTTGACTGTGGCATTGCACTCTGCACTG...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp TGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCACAGAAAAATCTGGGTaGATACGAAGGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: CFHIPLHSPSEEERMEATTEKSG*IRRWME
Trigger: TTCCATCCACCTTCGTATGCACCCAGATTTTTCTGT...GGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAACAGAAAAATCTGGGTaGATACGAAGGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGTEKSG*IRRWME
Trigger: TTCCATCCACCTTCGTATGCACCCAGATTTTTCTGT...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGAACATCAGATCCTGACTaGCCTGTTTTGCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGTSDPD*PVLLKF
Trigger: GAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGT...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTATCCTCCATGCTGCAATaGTCTAGTTCTCATCACGCC +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLSSMLQ*SSSHHA
Trigger: GGCGTGATGAGAACTAGAGCATTGCAGCATGGAGGA...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATAAGCACAGGATCTGGTaGCTCACAGTTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHKHRIW*LTVSSM
Trigger: CATGGAGGAAACTGTGAGGCACCAGATCCTGTGCTT...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCGAGCCTCCAGGCCGTTaGCTCAAGCTGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSHQSFRPGKIFWKDQSFEPPGR*LKLGWV
Trigger: CACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTC...GAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAGCCAGTGCTGTCTTTTaGAGTCTGCAGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEASAVF*SLQLRM
Trigger: CATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGC...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTGCTGGAGCCGTCTTTTaGGGTCTGGCCGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLAGAVF*GLAVRT
Trigger: GGTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGC...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGGAGATGGGCTTGGAATaGTCTTTCCGGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HQILTALFCSSSEMSGMMEMGLE*SFREGC
Trigger: GCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTC...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR CCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATTGTTATCAGAAGGGTTaGAGATGGGCTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINCYQKG*RWAWNG
Trigger: ACCATTCCAAGCCCATCTCCAACCCTTCTGATAACA...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATTGTTATCAGAAGGGTTaGAGATGGGCTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: RMQQQQQPHPQNQPLLLHCYQKG*RWAWNG
Trigger: ACCATTCCAAGCCCATCTCCAACCCTTCTGATAACA...ATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGAGGACAGCCACAAGAATaGCTGCAGTCACCAGATATG +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGGQPQE*LQSPDM
Trigger: CATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCC...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAGGACAGCCACAAGAATaGCTGCAGTCACCAGATATG +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLGQPQE*LQSPDM
Trigger: CATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCC...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTTGGATGGAAAGGAGCTaGTACAGATGGGCACAACCA +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFWMERS*YRWAQP
Trigger: TGGTTGTGCCCATCTGTACCAGCTCCTTTCCATCCA...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAAAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATGGGCATGGATGGAAAGGAGCTaGTACAGATGGGCACAACCA +
Preference number: 4 (lower is better)
Translates to: EKSGCIRRWMERSWYRWAWMERS*YRWAQP
Trigger: TGGTTGTGCCCATCTGTACCAGCTCCTTTCCATCCA...TGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGAGCCAAGACAAAGACTTaGGAATCACTCACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGAKTKT*ESLTPR
Trigger: CCTCGGAGTGAGTGATTCCCAAGTCTTTGTCTTGGC...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTAGCCAGGAAAAGCTGTaGGACCCCTCATTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFSQEKL*DPSFES
Trigger: TGACTCAAATGAGGGGTCCCACAGCTTTTCCTGGCT...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGAAGCCTATCTAGTAGCTaGGACTACAGGTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGSLSSS*DYRCTS
Trigger: TGACGTGCACCTGTAGTCCCAGCTACTAGATAGGCT...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGAGCCTATCTAGTAGCTaGGACTACAGGTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKSLSSS*DYRCTS
Trigger: TGACGTGCACCTGTAGTCCCAGCTACTAGATAGGCT...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTCACTGGAAGCCATCATaGGAGTACTATGTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFHWKPS*EYYVRA
Trigger: CGCTCTGACATAGTACTCCCATGATGGCTTCCAGTG...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACGAGGGGCTGGCTTACTaGCAGTTTGACATACTATAC +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYEGLAY*QFDILY
Trigger: GTATAGTATGTCAAACTGCCAGTAAGCCAGCCCCTC...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCACAAACCACATTGGGATaGCATTTACAGAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPQTTLG*HLQKLR
Trigger: TCTGAGCTTCTGTAAATGCCATCCCAATGTGGTTTG...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTCCCCAGATTCGGTTTTaGAAGCATGAGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFPQIRF*KHEEKA
Trigger: AGCTTTCTCCTCATGCTTTCAAAACCGAATCTGGGG...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTCTCTTCTTTGGGCGGTaGGCCCTCCTCGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSLFFGR*ALLGSC
Trigger: ACAGGACCCGAGGAGGGCTCACCGCCCAAAGAAGAG...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CCAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACACCAGGACAAAAGCAATaGTCTTCCGCTTGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: PKKHGKLESRGHSRNKGTPGQKQ*SSACCD
Trigger: ATCACAACAAGCGGAAGATCATTGCTTTTGTCCTGG...TGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCCAGGACAAAAGCAATaGTCTTCCGCTTGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPPGQKQ*SSACCD
Trigger: ATCACAACAAGCGGAAGATCATTGCTTTTGTCCTGG...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATACAACTAAGTGGAAGTTaGTTCACTTTGTCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: HIPLHSPSEEERMEATSIQLSGS*FTLSQA
Trigger: AGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTG...TATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCACAACTAAGTGGAAGTTaGTTCACTTTGTCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPQLSGS*FTLSQA
Trigger: AGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTG...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTACATCAGTACAGAGAATaGCCCAAGAAGGGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLHQYRE*PKKGRS
Trigger: ACTCCTACCCTTCTTGGGTCATTCTCTGTACTGATG...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCAAGACAGAGACCGAAGTaGGTTAGTAAAAGTCATGAA +
Preference number: 4 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPRQRPK*VSKSHE
Trigger: TTCATGACTTTTACTAACTCACTTCGGTCTCTGTCT...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCATTAGAAAAGTTTAGTTaGCAGACAGAGACCGAAGTG +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPLEKFS*QTETEV
Trigger: CACTTCGGTCTCTGTCTGTCAACTAAACTTTTCTAA...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CCAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGAATGGGTTAATGGCTaGGGAGACAGTCAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: PKKHGKLESRGHSRNKGTEWVNG*GDSQRN
Trigger: ATTCCTTTGACTGTCTCCTCAGCCATTAACCCATTC...TGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTGAATGGGTTAATGGCTaGGGAGACAGTCAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTEWVNG*GDSQRN
Trigger: ATTCCTTTGACTGTCTCCTCAGCCATTAACCCATTC...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGGGATTCTCTAAGCCTTaGGAAGTTCACACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQGFSKP*EVHTKA
Trigger: AGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATCC...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGAAAGACATCAGATCCTaGCTGCCCTGTTTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQKDIRS*LPCFAQ
Trigger: TTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTT...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACAAAGACATCAGATCCTaGCTGCCCTGTTTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYKDIRS*LPCFAQ
Trigger: TTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTT...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCATTTCAACACAAGCAATaGTACTTCTCAGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPFQHKQ*YFSESA
Trigger: AGCAGACTCTGAGAAGTATCATTGCTTGTGTTGAAA...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTAGGCTTACTGGCAGTTTaGCATACTATACAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLGLLAV*HTIQLR
Trigger: TCTGAGCTGTATAGTATGTCAAACTGCCAGTAAGCC...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTGCGCTCGCCTTCGGCTaGTTCGCTTACTGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLALAFG*FAYCRR
Trigger: TCGGCGACAGTAAGCGAAGCAGCCGAAGGCGAGCGC...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR GCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCCACGAACCGCATCCTaGTCGGATAGCGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLPRTAS*SDSASA
Trigger: GGCGGAAGCGCTATCCGAGCAGGATGCGGTTCGTGG...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTCCACGAACCGCATCCTaGTCGGATAGCGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFPRTAS*SDSASA
Trigger: GGCGGAAGCGCTATCCGAGCAGGATGCGGTTCGTGG...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGGTCTGCAGCTCCGGATaGGACTTACTAGTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HQILTALFCSSSEMSGMMVCSSG*DLLVLS
Trigger: AGACAGCACTAGTAAGTCGCATCCGGAGCTGCAGAC...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTGGGCCCTGCTCCTCTaGACCGGACTTGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: DSLSLEKFTPKLQTRENIWALLL*TGLVRA
Trigger: GGCTCTAACAAGTCCGGTGCAGAGGAGCAGGGCCCA...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTTGCAGTCACCAGATATaGAAAGAAGTGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFCSHQI*KEVAAL
Trigger: GAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCA...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCAAGCCACAAGAATGGCTaGAGTCACCAGATATGCAAA +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSASHKNG*SHQICK
Trigger: TTTGCATATCTGGTGACTGCAGCCATTCTTGTGGCT...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAACAATGTCACCAAAGTaGAGGTGCAAAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLTMSPK*RCKAQS
Trigger: GCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAATTCAAAGTAGCTCTTTaGCCATTGGCATTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PLHSPSEEERMEATSINKFKVAL*PLAFPH
Trigger: ATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAA...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCACCAAGTTCTGTTTTATaGTCGGTACAACTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPPSSVL*SVQLSG
Trigger: TCCACTTAGTTGTACCGAGCATAAAACAGAACTTGG...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCACCAAGTTCTGTTTTATaGTCGGTACAACTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPPSSVL*SVQLSG
Trigger: TCCACTTAGTTGTACCGAGCATAAAACAGAACTTGG...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGACCAAGTTCTGTTTTATaGTCGGTACAACTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGPSSVL*SVQLSG
Trigger: TCCACTTAGTTGTACCGAGCATAAAACAGAACTTGG...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGAAATGGGCTGGGGGTGTaGAATAAGAGAAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGNGLGV*NKRSKE
Trigger: TTCCTTGCTTCTCTTATTGCACACCCCCAGCCCATT...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCCTGACTGCCCTGTTTTaGTCAAGTTCTGAAATGAGT +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLLTALF*SSSEMS
Trigger: ACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAG...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTCAGTTTCCTCCATGCTaGAATGCTCTAGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTQFPPC*NALVLI
Trigger: GATGAGAACTAGAGCATTGCAGCATGGAGGAAACTG...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGCGAGCCTCTTCTTCCTaGTTTCTCGTCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: RHQILTALFCSSSEMSGMRASSS*FLVSTT
Trigger: TGTGGTGGAGACGAGAAACCAGGAAGAAGAGGCTCG...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR CCA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAAGAGCCTCCAGGCCGTTaGCTCAAGCTGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKEPPGR*LKLGWV
Trigger: CACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTC...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAGGTTGGAGATGGGCTTaGAATGGTCTTTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEGWRWA*NGLSGK
Trigger: CTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACC...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTTGTTATCAGAAGGGTTaGAGATGGGCTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPCYQKG*RWAWNG
Trigger: ACCATTCCAAGCCCATCTCCAACCCTTCTGATAACA...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CTATTAAAGTTTATGGAGCGCTGGCAGAATGCAGAAAGCTCAGGACTGGGAGACGGTTTGTGTCAGCCTTaGGGAGCTCCTTGTTATCAG +
Preference number: 4 (lower is better)
Translates to: LLKFMERWQNAESSGLGDGLCQP*GAPCYQ
Trigger: CTGATAACAAGGAGCTCCCCAAGGCTGACACAAACC...GTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCATAAACTTTAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAACCTTTGTCAGCAAGCTaGTTTGTGTCAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEPLSAS*FVSALG
Trigger: CCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGG...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGTTTCTTTCTCTTCTTTaGGCGGTGAGCCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RHQILTALFCSSSEMSGMFLSLL*AVSPPR
Trigger: CCGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAA...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGAGATATGCAAAGAAGTaGCTGCTCTCCGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSLKSLVFLGRPERHQILRYAKK*LLSALP
Trigger: TGGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCT...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCGTAGTCACTGGCCTTTaGCCGCCGGGTGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTVVTGL*PPGDFR
Trigger: TCTAAAGTCACCCGGCGGCCAAAGGCCAGTGACTAC...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
CDS-3UTR CCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCTTTAACCTGCTGTTTTaGTTTGCTGCTGAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSFNLLF*FAAEVF
Trigger: AAAGACTTCAGCAGCAAACCAAAACAGCAGGTTAAA...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACTCGGTACAACTAAGTaGAAGTTGATTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPLGTTK*KLIHFV
Trigger: GACAAAGTGAATCAACTTCCACTTAGTTGTACCGAG...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGAGCATACGAAGGTGGATaGAAAGGAGCTGGTACAGAT +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGAYEGG*KGAGTD
Trigger: ATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGC...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTGCATACGAAGGTGGATaGAAAGGAGCTGGTACAGAT +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFAYEGG*KGAGTD
Trigger: ATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGC...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCGAATTTCCATTTGGATaGTCAATAGTGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSEFPFG*SIVSSS
Trigger: AGAACTGGACACTATTGACCATCCAAATGGAAATTC...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCTCCTTTCCAAGAAGCTaGACAGGAAACCCAATAAAT +
Preference number: 4 (lower is better)
Translates to: EETVKGIERPGFEGLFTTSFPRS*TGNPIN
Trigger: ATTTATTGGGTTTCCTGTCCAGCTTCTTGGAAAGGA...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGCACGCCCATAGCATCTaGCATCAGGTTACCCTGTAC +
Preference number: 4 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKHAHSI*HQVTLY
Trigger: GTACAGGGTAACCTGATGCCAGATGCTATGGGCGTG...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAACAGAAGCACAGGATCTaGTGCCTCACAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEQKHRI*CLTVSS
Trigger: GGAGGAAACTGTGAGGCACCAGATCCTGTGCTTCTG...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTATCGGTTTTGAAAGCATaGGGAGAAAGCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLSVLKA*GESFPL
Trigger: CAAAGGGAAGCTTTCTCCTCATGCTTTCAAAACCGA...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTTCGGTTTTGAAAGCATaGGGAGAAAGCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFSVLKA*GESFPL
Trigger: CAAAGGGAAGCTTTCTCCTCATGCTTTCAAAACCGA...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCCTGCGGGGGAGAAATaGGGTCAGTTTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLPAGEK*GQFPPQ
Trigger: CTGGGGAGGAAACTGACCTCATTTCTCCCCCGCAGG...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGAGCACAATCCATTGGTaGCGTTCATCTTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQSTIHW*RSSFSR
Trigger: TCTGGAAAAAGATGAACGTCACCAATGGATTGTGCT...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATCAACTAAGTGGAAGTTaGTTCACTTTGTCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINQLSGS*FTLSQA
Trigger: AGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTG...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGATATTTTAAAAATCTGTaGTGGGACAGTGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGYFKNL*WDSGLT
Trigger: AGTGAGGCCACTGTCCCATCACAGATTTTTAAAATA...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATTATTTTAAAAATCTGTaGTGGGACAGTGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDYFKNL*WDSGLT
Trigger: AGTGAGGCCACTGTCCCATCACAGATTTTTAAAATA...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGACTGAGTATGATTGTGTaGAAGATCACACTACTTCAA +
Preference number: 4 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGLSMIV*KITLLQ
Trigger: TTGAAGTAGTGTGATCTTTCACACAATCATACTCAG...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACTCAGACTTACTGCCTTaGCAGCACAGAATTCATCTT +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYSDLLP*QHRIHL
Trigger: AAGATGAATTCTGTGCTGTCAAGGCAGTAAGTCTGA...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTAGAGAGGCCTGGCTTTaGGGGCCTCTTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFREAWL*GPLHHQ
Trigger: CTGGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCT...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTGGATTCTCTAAGCCTTaGGAAGTTCACACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFGFSKP*EVHTKA
Trigger: AGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATCC...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGAGTTTTGCTCAAGTTCTaGAATGAGTGGCATGATGAA +
Preference number: 4 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGVLLKF*NEWHDE
Trigger: TTCATCATGCCACTCATTTCAGAACTTGAGCAAAAC...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAGTGGGACCCCTCATTTaGGTCACATCCATATGGCAT +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEVGPLI*VTSIWH
Trigger: ATGCCATATGGATGTGACTCAAATGAGGGGTCCCAC...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCACATTGTGGAAACAGTaGCCATCTATTAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLTLWKQ*PSINWE
Trigger: TTCCCAGTTAATAGATGGTCACTGTTTCCACAATGT...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCGGTGGAGACGTTTCCTaGAGAAGGCCGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: VHTKASDQGKYFGKISLSGGDVS*RRPYSS
Trigger: GCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACC...GGAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTGCGGCTCCGGATaGGACTTGGTAGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFVCGSG*DLVEPP
Trigger: TGGAGGCTCTACCAAGTCGCATCCGGAGCCGCAGAC...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTTGGGCCCTGCTCCTCTaGACCGGACTTGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSWALLL*TGLVRA
Trigger: GGCTCTAACAAGTCCGGTGCAGAGGAGCAGGGCCCA...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTCCGTCTATTGGGCCCTaGTCCTCTGCACCGGACTTG +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSPSIGP*SSAPDL
Trigger: CAAGTCCGGTGCAGAGGAGCAGGGCCCAATAGACGG...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCATTCAAAGTAGCTCTTTaGCCATTGGCATTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAFKVAL*PLAFPH
Trigger: ATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAA...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTGGACAGTGGCCTCACTaGCAGGAAGCCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: DSLSLEKFTPKLQTRENIGQWPH*QEAQVL
Trigger: CAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTCC...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTACAGAAAAATCTGGGTaGATACGAAGGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPTEKSG*IRRWME
Trigger: TTCCATCCACCTTCGTATGCACCCAGATTTTTCTGT...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTGAAAGAAAACCTCTCTaGCAGAAGGAACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTERKPL*QKELNS
Trigger: AGAGTTCAGTTCCTTCTGGCAGAGAGGTTTTCTTTC...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCAGAAAGAAAACCTCTCTaGCAGAAGGAACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAERKPL*QKELNS
Trigger: AGAGTTCAGTTCCTTCTGGCAGAGAGGTTTTCTTTC...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTTCAAGCAATTCTCCTaGCTCAGCCTATCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKFKQFS*LSLSSS
Trigger: GCTACTAGATAGGCTGAGGCAGGAGAATTGCTTGAA...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTGCCGTTGGCTCAAGCTaGGGTGGGTGGAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSAVGSS*GGWRRF
Trigger: GAAACGTCTCCACCCACCCCAGCTTGAGCCAACGGC...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCCCGGGAAGGCTGCTCTaGAACCACCTTGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: VHTKASDQGKYFGKISLSPGRLL*NHLVRA
Trigger: AGCCCTAACAAGGTGGTTCCAGAGCAGCCTTCCCGG...GGAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR CCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGGGTTTGTGTCAGCCTTaGGGAGCTCCTTGTTATCAG +
Preference number: 4 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKGLCQP*GAPCYQ
Trigger: CTGATAACAAGGAGCTCCCCAAGGCTGACACAAACC...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR CCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGGGTTTGTGTCAGCCTTaGGGAGCTCCTTGTTATCAG +
Preference number: 4 (lower is better)
Translates to: HQILTALFCSSSEMSGMMGLCQP*GAPCYQ
Trigger: CTGATAACAAGGAGCTCCCCAAGGCTGACACAAACC...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR CCA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCCTTCACGGTTCTCACTaGAGGCAGAACCGGACATCT +
Preference number: 4 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTLHGSH*RQNRTS
Trigger: AGATGTCCGGTTCTGCCTCCAGTGAGAACCGTGAAG...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
CDS-3UTR CCA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAACTCGGTACAACTAAGTaGAAGTTGATTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: PLHSPSEEERMEATSINKLGTTK*KLIHFV
Trigger: GACAAAGTGAATCAACTTCCACTTAGTTGTACCGAG...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGACTCGGTACAACTAAGTaGAAGTTGATTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGLGTTK*KLIHFV
Trigger: GACAAAGTGAATCAACTTCCACTTAGTTGTACCGAG...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCACTCCTGACATGGCATaGAAGAAGAATTTTTATCAA +
Preference number: 4 (lower is better)
Translates to: FHIPLHSPSEEERMEATSTPDMA*KKNFYQ
Trigger: TTGATAAAAATTCTTCTTCCATGCCATGTCAGGAGT...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTGGGAACAGAAAAATCTaGGTGCATACGAAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFGNRKI*VHTKVD
Trigger: ATCCACCTTCGTATGCACCCAGATTTTTCTGTTCCC...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTAGGGGAATTTCCATTTaGATGGTCAATAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPRGISI*MVNSVQ
Trigger: CTGGACACTATTGACCATCCAAATGGAAATTCCCCT...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATTCCTTTCCAAGAAGCTaGACAGGAAACCCAATAAAT +
Preference number: 4 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDSFPRS*TGNPIN
Trigger: ATTTATTGGGTTTCCTGTCCAGCTTCTTGGAAAGGA...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAAAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATGGGCACTAACCAAAGAAACATaGGAAGCTGGAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: EKSGCIRRWMERSWYRWALTKET*EAGKSR
Trigger: CCTCGACTTTCCAGCTTCCCATGTTTCTTTGGTTAG...TGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGAGCCTATCTAGTAGCTaGGACTACAGGTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKSLSSS*DYRCTS
Trigger: TGACGTGCACCTGTAGTCCCAGCTACTAGATAGGCT...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGCAAACCACATTGGGATaGCATTTACAGAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQQTTLG*HLQKLR
Trigger: TCTGAGCTTCTGTAAATGCCATCCCAATGTGGTTTG...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGAAAAACCAAACCACATTaGGATGGCATTTACAGAAGC +
Preference number: 4 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGKTKPH*DGIYRS
Trigger: GCTTCTGTAAATGCCATCCCAATGTGGTTTGGTTTT...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGCCCCAGATTCGGTTTTaGAAGCATGAGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKPQIRF*KHEEKA
Trigger: AGCTTTCTCCTCATGCTTTCAAAACCGAATCTGGGG...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR TCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTAGCACAATCCATTGGTaGCGTTCATCTTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFSTIHW*RSSFSR
Trigger: TCTGGAAAAAGATGAACGTCACCAATGGATTGTGCT...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACTATTTTAAAAATCTGTaGTGGGACAGTGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYYFKNL*WDSGLT
Trigger: AGTGAGGCCACTGTCCCATCACAGATTTTTAAAATA...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGATCATGTTTTCTCGCATaGAACATAAACTTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGSCFLA*NINLPY
Trigger: ATAGGGCAAGTTTATGTTTCATGCGAGAAAACATGA...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCCAATGCGGTAGAGCATaGTTAGAAAAGATAAACCTT +
Preference number: 4 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLQCGRA*LEKINL
Trigger: AAGGTTTATCTTTTCTAATCATGCTCTACCGCATTG...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGAGCTATCCGCCAAGAATaGAAATGTCAACTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGAIRQE*KCQLKA
Trigger: AGCTTTGAGTTGACATTTTCATTCTTGGCGGATAGC...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAATGTAGAAATATAGGCTCCACCCCACATCTAATGAATCAGATAATGCTTTTTCCACGAACCGCATCCTaGTCGGATAGCGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: ECRNIGSTPHLMNQIMLFPRTAS*SDSASA
Trigger: GGCGGAAGCGCTATCCGAGCAGGATGCGGTTCGTGG...AAAAAGCATTATCTGATTCATTAGATGTGGGGTGGAGCCTATATTTCTACATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAGATCTTTTAGGAGGTaGAGGGAAAACATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINRSFRR*RENIQN
Trigger: ATTCTGAATGTTTTCCCTGCACCTCCTAAAAGATCT...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000409015.5
CDS-3UTR GCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCACCAAGTTCTGTTTTATaGTCGGTACAACTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAPSSVL*SVQLSG
Trigger: TCCACTTAGTTGTACCGAGCATAAAACAGAACTTGG...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGAATGGGCTGGGGGTGTaGAATAAGAGAAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: HQILTALFCSSSEMSGMMNGLGV*NKRSKE
Trigger: TTCCTTGCTTCTCTTATTGCACACCCCCAGCCCATT...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATCTGACTGCCCTGTTTTaGTCAAGTTCTGAAATGAGT +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHLTALF*SSSEMS
Trigger: ACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAG...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCAAGCACAGGATCTGGTaGCTCACAGTTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTKHRIW*LTVSSM
Trigger: CATGGAGGAAACTGTGAGGCACCAGATCCTGTGCTT...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATAGTGTACATCTGACTTaGAGAACTAGACGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHSVHLT*RTRRVE
Trigger: CTCAACTCGTCTAGTTCTGCAAGTCAGATGTACACT...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAAGCCGTTGGCTCAAGCTaGGGTGGGTGGAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKAVGSS*GGWRRF
Trigger: GAAACGTCTCCACCCACCCCAGCTTGAGCCAACGGC...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGCAGCCTGCCCAGGCTaGGATCTCCCTTTGGTCATA +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFAACPG*DLPLVI
Trigger: TATGACCAAAGGGAGATCCCAGCCTGGGCAGGCTGC...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGAGAATTTCCATTTGGATaGTCAATAGTGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGEFPFG*SIVSSS
Trigger: AGAACTGGACACTATTGACCATCCAAATGGAAATTC...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATGAATTTCCATTTGGATaGTCAATAGTGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: IPLHSPSEEERMEATSINEFPFG*SIVSSS
Trigger: AGAACTGGACACTATTGACCATCCAAATGGAAATTC...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATAGGGGAATTTCCATTTaGATGGTCAATAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHRGISI*MVNSVQ
Trigger: CTGGACACTATTGACCATCCAAATGGAAATTCCCCT...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTCAGAGGGTGAGGGGCTaGCTTACTGGCAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: DSLSLEKFTPKLQTRENIQRVRG*LTGSLT
Trigger: TGTCAAACTGCCAGTAAGCCAGCCCCTCACCCTCTG...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACAAAACCAAACCACATTaGGATGGCATTTACAGAAGC +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYKTKPH*DGIYRS
Trigger: GCTTCTGTAAATGCCATCCCAATGTGGTTTGGTTTT...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CTATTAAAGTTTATGGAGCGCTGGCAGAATGCAGAAAGCTCAGGACTGGGAGACAAGAGTGTTTCTGCGTaGGCCTATTTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: LLKFMERWQNAESSGLGDKSVSA*AYFLIC
Trigger: ACAGATGAGGAAATAGGCCCACGCAGAAACACTCTT...GTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCATAAACTTTAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGACAACTAAGTGGAAGTTaGTTCACTTTGTCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGQLSGS*FTLSQA
Trigger: AGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTG...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTGAGTATGATTGTGTaGAAGATCACACTACTTCAA +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYLSMIV*KITLLQ
Trigger: TTGAAGTAGTGTGATCTTTCACACAATCATACTCAG...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGTCATGTTTTCTCGCATaGAACATAAACTTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQSCFLA*NINLPY
Trigger: ATAGGGCAAGTTTATGTTTCATGCGAGAAAACATGA...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTAATTTGTATTAACTCCTaGCATGGCATGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLICINS*HGMEEE
Trigger: TTCTTCTTCCATGCCATGTCAGGAGTTAATACAAAT...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCACAATGCGGTAGAGCATaGTTAGAAAAGATAAACCTT +
Preference number: 4 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAQCGRA*LEKINL
Trigger: AAGGTTTATCTTTTCTAATCATGCTCTACCGCATTG...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTAGACAGAGACCGAAGTaGGTTAGTAAAAGTCATGAA +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFRQRPK*VSKSHE
Trigger: TTCATGACTTTTACTAACTCACTTCGGTCTCTGTCT...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGGAATGGGTTAATGGCTaGGGAGACAGTCAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LSLKSLVFLGRPERHQILEWVNG*GDSQRN
Trigger: ATTCCTTTGACTGTCTCCTCAGCCATTAACCCATTC...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTAAACAAACTGGGCCCTaGCGAAACAGGCGGATTGGG +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFKQTGP*RNRRIG
Trigger: CCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTT...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTGGGTTCTTTAGGAGTGAGGAAGGTGTATaGGGAAACAAACTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FNDNQAELFDTSRTGFFRSEEGV*GNKLGP
Trigger: AGGGCCCAGTTTGTTTCCTCATACACCTTCCTCACT...CCTAAAGAACCCAGTTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGATTTCAACACAAGCAATaGTACTTCTCAGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGFQHKQ*YFSESA
Trigger: AGCAGACTCTGAGAAGTATCATTGCTTGTGTTGAAA...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTTTTCAACACAAGCAATaGTACTTCTCAGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFFQHKQ*YFSESA
Trigger: AGCAGACTCTGAGAAGTATCATTGCTTGTGTTGAAA...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATACATTGTGGAAACAGTaGCCATCTATTAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHTLWKQ*PSINWE
Trigger: TTCCCAGTTAATAGATGGTCACTGTTTCCACAATGT...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGACTCCAGCTTCTTCTTaGTTGACGCTTTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTTPASS*LTLSVA
Trigger: GGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGT...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAATGTAGAAATATAGGCTCCACCCCACATCTAATGAATCAGATAATGCTTTTTCCGTCTATTGGGCCCTaGTCCTCTGCACCGGACTTG +
Preference number: 4 (lower is better)
Translates to: ECRNIGSTPHLMNQIMLFPSIGP*SSAPDL
Trigger: CAAGTCCGGTGCAGAGGAGCAGGGCCCAATAGACGG...AAAAAGCATTATCTGATTCATTAGATGTGGGGTGGAGCCTATATTTCTACATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCTGCAGTCACCAGATATaGAAAGAAGTGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTCSHQI*KEVAAL
Trigger: GAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCA...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
CDS-3UTR GCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGAGCCACAAGAATGGCTaGAGTCACCAGATATGCAAA +
Preference number: 4 (lower is better)
Translates to: HQILTALFCSSSEMSGMMSHKNG*SHQICK
Trigger: TTTGCATATCTGGTGACTGCAGCCATTCTTGTGGCT...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCATTCTGTTAGGATCACCAAAGTGCAGGTaGAAAGCCCAAAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QSIGDVHLFPEEYTILLGSPKCR*KAQSSP
Trigger: GGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGA...TCCTAACAGAATGGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409015.5
CDS-3UTR GCA 90 bp TTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTGGGTTCTTTAGGTCCTCCATGCTGCAATaGTCTAGTTCTCATCACGCC +
Preference number: 4 (lower is better)
Translates to: FNDNQAELFDTSRTGFFRSSMLQ*SSSHHA
Trigger: GGCGTGATGAGAACTAGAGCATTGCAGCATGGAGGA...CCTAAAGAACCCAGTTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGTCTCCCCAGGACTCTTaGTCAAGCAAGTCACGCCAA +
Preference number: 4 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTSPQDS*SSKSRQ
Trigger: TTGGCGTGACTTGCTTGAGCAAGAGTCCTGGGGAGA...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTGCCAGTGCTGTCTTTTaGAGTCTGCAGCTCCGGATG +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLASAVF*SLQLRM
Trigger: CATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGC...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTGAGATGGGCTTGGAATaGTCTTTCCGGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLEMGLE*SFREGC
Trigger: GCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTC...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTTCTTTCTCTTCTTTaGGCGGTGAGCCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: DSLSLEKFTPKLQTRENIFLSLL*AVSPPR
Trigger: CCGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAA...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp TTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTGGGTTCTTTAGGGGACAGCCACAAGAATaGCTGCAGTCACCAGATATG +
Preference number: 4 (lower is better)
Translates to: FNDNQAELFDTSRTGFFRGQPQE*LQSPDM
Trigger: CATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCC...CCTAAAGAACCCAGTTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCGTAGTCACTGGCCTTTaGCCGCCGGGTGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: SSHQSFRPGKIFWKDQSFVVTGL*PPGDFR
Trigger: TCTAAAGTCACCCGGCGGCCAAAGGCCAGTGACTAC...GAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAAGCAGCCTGCCCAGGCTaGGATCTCCCTTTGGTCATA +
Preference number: 4 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKAACPG*DLPLVI
Trigger: TATGACCAAAGGGAGATCCCAGCCTGGGCAGGCTGC...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTTTTAACCTGCTGTTTTaGTTTGCTGCTGAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPFNLLF*FAAEVF
Trigger: AAAGACTTCAGCAGCAAACCAAAACAGCAGGTTAAA...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGACTCGGTACAACTAAGTaGAAGTTGATTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGLGTTK*KLIHFV
Trigger: GACAAAGTGAATCAACTTCCACTTAGTTGTACCGAG...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAAAATCTGGGTGCATACGAAGGTGGATGGAAAGGAGCTGGTACAGATGGGCACTCGGTACAACTAAGTaGAAGTTGATTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: EKSGCIRRWMERSWYRWALGTTK*KLIHFV
Trigger: GACAAAGTGAATCAACTTCCACTTAGTTGTACCGAG...TGCCCATCTGTACCAGCTCCTTTCCATCCACCTTCGTATGCACCCAGATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCATAAAAGCCCTTTaGAAAAACTGCAGACCAAAA +
Preference number: 4 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYLIKAL*KNCRPK
Trigger: TTTTGGTCTGCAGTTTTTCCAAAGGGCTTTTATGAG...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGGGAGTCTCGCTCTATTaGCAGGTTGGAGTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTGVSLY*QVGVQW
Trigger: CCACTGAACTCCAACCTGCCAATAGAGCGAGACTCC...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGAAAACCAAACCACATTaGGATGGCATTTACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKKTKPH*DGIYRS
Trigger: GCTTCTGTAAATGCCATCCCAATGTGGTTTGGTTTT...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAAGCACAATCCATTGGTaGCGTTCATCTTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEESTIHW*RSSFSR
Trigger: TCTGGAAAAAGATGAACGTCACCAATGGATTGTGCT...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATCTGAGTATGATTGTGTaGAAGATCACACTACTTCAA +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHLSMIV*KITLLQ
Trigger: TTGAAGTAGTGTGATCTTTCACACAATCATACTCAG...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAATTTGTATTAACTCCTaGCATGGCATGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLICINS*HGMEEE
Trigger: TTCTTCTTCCATGCCATGTCAGGAGTTAATACAAAT...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGACAATGCGGTAGAGCATaGTTAGAAAAGATAAACCTT +
Preference number: 4 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGQCGRA*LEKINL
Trigger: AAGGTTTATCTTTTCTAATCATGCTCTACCGCATTG...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGTCAGACTTACTGCCTTaGCAGCACAGAATTCATCTT +
Preference number: 4 (lower is better)
Translates to: RHQILTALFCSSSEMSGMSDLLP*QHRIHL
Trigger: AAGATGAATTCTGTGCTGTCAAGGCAGTAAGTCTGA...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGGCTATCCGCCAAGAATaGAAATGTCAACTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKAIRQE*KCQLKA
Trigger: AGCTTTGAGTTGACATTTTCATTCTTGGCGGATAGC...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGAGTGAGGAAGGTGTATaGGGAAACAAACTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTSEEGV*GNKLGP
Trigger: AGGGCCCAGTTTGTTTCCTCATACACCTTCCTCACT...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCAAAGACATCAGATCCTaGCTGCCCTGTTTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTKDIRS*LPCFAQ
Trigger: TTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTT...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTATATCTATCAGAGGGTaGGGGGCTGGCTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLISIRG*GAGLLA
Trigger: TGCCAGTAAGCCAGCCCCTCACCCTCTGATAGATAT...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAAGTCTGCAGCTCCGGATaGGACTTACTAGTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: REKFLSMTTKLNYSIPAEVCSSG*DLLVLS
Trigger: AGACAGCACTAGTAAGTCGCATCCGGAGCTGCAGAC...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAATTCAAAGTAGCTCTTTaGCCATTGGCATTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEFKVAL*PLAFPH
Trigger: ATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAA...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCTTCAAGCAATTCTCCTaGCTCAGCCTATCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTFKQFS*LSLSSS
Trigger: GCTACTAGATAGGCTGAGGCAGGAGAATTGCTTGAA...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGTCCTCCATGCTGCAATaGTCTAGTTCTCATCACGCC +
Preference number: 4 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTSSMLQ*SSSHHA
Trigger: GGCGTGATGAGAACTAGAGCATTGCAGCATGGAGGA...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp CTATTAAAGTTTATGGAGCGCTGGCAGAATGCAGAAAGCTCAGGACTGGGAGACAGTTTGCCACTAACTTaGAGTAGAAACTTAGCGGAA +
Preference number: 4 (lower is better)
Translates to: LLKFMERWQNAESSGLGDSLPLT*SRNLAE
Trigger: TTCCGCTAAGTTTCTACTGCAAGTTAGTGGCAAACT...GTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCATAAACTTTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CCA 90 bp AGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCGAGCCTCTTCTTCCTaGTTTCTCGTCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: SSHQSFRPGKIFWKDQSFRASSS*FLVSTT
Trigger: TGTGGTGGAGACGAGAAACCAGGAAGAAGAGGCTCG...GAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR CCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTTCACGGTTCTCACTaGAGGCAGAACCGGACATCT +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLLHGSH*RQNRTS
Trigger: AGATGTCCGGTTCTGCCTCCAGTGAGAACCGTGAAG...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTCCTTCTCGCTACCCGTaGAATCCGAAAGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSPSRYP*NPKVSL
Trigger: AAGGGACACTTTCGGATTCCACGGGTAGCGAGAAGG...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTAGATATGCAAAGAAGTaGCTGCTCTCCGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSRYAKK*LLSALP
Trigger: TGGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCT...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATCTCATAAAAGCCCTTTaGAAAAACTGCAGACCAAAA +
Preference number: 4 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHLIKAL*KNCRPK
Trigger: TTTTGGTCTGCAGTTTTTCCAAAGGGCTTTTATGAG...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGAGCCAGGAAAAGCTGTaGGACCCCTCATTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTSQEKL*DPSFES
Trigger: TGACTCAAATGAGGGGTCCCACAGCTTTTCCTGGCT...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTATCCTCAGTAGGCTCTaGAGACTTAACTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DSLSLEKFTPKLQTRENIILSRL*RLNFLL
Trigger: CAGGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGAT...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR TCA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAACAACTAAGTGGAAGTTaGTTCACTTTGTCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: SEEERMEATSINKGNTEEQLSGS*FTLSQA
Trigger: AGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTG...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR TCA 90 bp CATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGATGGTTTTGCTCAAGTTCTaGAATGAGTGGCATGATGAA +
Preference number: 4 (lower is better)
Translates to: HQILTALFCSSSEMSGMMVLLKF*NEWHDE
Trigger: TTCATCATGCCACTCATTTCAGAACTTGAGCAAAAC...CATCATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAAATATCTATCAGAGGGTaGGGGGCTGGCTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKISIRG*GAGLLA
Trigger: TGCCAGTAAGCCAGCCCCTCACCCTCTGATAGATAT...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TCTAGTTTGTTGTCTAAAAAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCCAAAATTCCCCAAGGTaGTTCAAATGCCTATTAAAG +
Preference number: 4 (lower is better)
Translates to: SSLLSKKGECNSNSNRIPQNSPR*FKCLLK
Trigger: CTTTAATAGGCATTTGAATCACCTTGGGGAATTTTG...GGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTTTTTAGACAACAAACTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTTCTTTCCGGGAAGGCTaGTCTGGAACCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSSFREG*SGTTLL
Trigger: TAACAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGA...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp TTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTGGGTTCTTTAGGAGCCACAAGAATGGCTaGAGTCACCAGATATGCAAA +
Preference number: 4 (lower is better)
Translates to: FNDNQAELFDTSRTGFFRSHKNG*SHQICK
Trigger: TTTGCATATCTGGTGACTGCAGCCATTCTTGTGGCT...CCTAAAGAACCCAGTTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAAAAGCACAGGATCTGGTaGCTCACAGTTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: REKFLSMTTKLNYSIPAEKHRIW*LTVSSM
Trigger: CATGGAGGAAACTGTGAGGCACCAGATCCTGTGCTT...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp CAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCATTCTGTTAGGACAGAAGGGTTGGAGATaGGCTTGGAATGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QSIGDVHLFPEEYTILLGQKGWR*AWNGLS
Trigger: GGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTG...TCCTAACAGAATGGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409015.5
CDS-3UTR CCA 90 bp TTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTGGGTTCTTTAGGTGTTATCAGAAGGGTTaGAGATGGGCTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: FNDNQAELFDTSRTGFFRCYQKG*RWAWNG
Trigger: ACCATTCCAAGCCCATCTCCAACCCTTCTGATAACA...CCTAAAGAACCCAGTTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR CCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTGGTTTGTGTCAGCCTTaGGGAGCTCCTTGTTATCAG +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLGLCQP*GAPCYQ
Trigger: CTGATAACAAGGAGCTCCCCAAGGCTGACACAAACC...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTCCTTTCTACACAGACTaGCCTTCAACTTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFPFYTD*PSTSPE
Trigger: CTCAGGGGAAGTTGAAGGCCAGTCTGTGTAGAAAGG...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGATTTGTATTAACTCCTaGCATGGCATGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LSLKSLVFLGRPERHQILICINS*HGMEEE
Trigger: TTCTTCTTCCATGCCATGTCAGGAGTTAATACAAAT...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAATGTAGAAATATAGGCTCCACCCCACATCTAATGAATCAGATAATGCTTTTTACTCCAGCTTCTTCTTaGTTGACGCTTTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ECRNIGSTPHLMNQIMLFTPASS*LTLSVA
Trigger: GGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGT...AAAAAGCATTATCTGATTCATTAGATGTGGGGTGGAGCCTATATTTCTACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTTGCAGAGAGAAACAGTaGAGAGTGCAATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLCREKQ*RVQCHS
Trigger: ACTGTGGCATTGCACTCTGCACTGTTTCTCTCTGCA...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTTGCAGAGAGAAACAGTaGAGAGTGCAATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFCREKQ*RVQCHS
Trigger: ACTGTGGCATTGCACTCTGCACTGTTTCTCTCTGCA...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAACAGAAGGGTTGGAGATaGGCTTGGAATGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKQKGWR*AWNGLS
Trigger: GGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTG...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAAGGACAGCCACAAGAATaGCTGCAGTCACCAGATATG +
Preference number: 4 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKGQPQE*LQSPDM
Trigger: CATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCC...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTAGGAGCTGGTACAGATaGGCACAACCAGAAAACATG +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFRSWYR*AQPENM
Trigger: CATGTTTTCTGGTTGTGCCCATCTGTACCAGCTCCT...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAACACTGGAAGCCATCATaGGAGTACTATGTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKHWKPS*EYYVRA
Trigger: CGCTCTGACATAGTACTCCCATGATGGCTTCCAGTG...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp AGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCCAGGACAAAAGCAATaGTCTTCCGCTTGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: SSHQSFRPGKIFWKDQSFPGQKQ*SSACCD
Trigger: ATCACAACAAGCGGAAGATCATTGCTTTTGTCCTGG...GAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp TTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTGGGTTCTTTAGGTTAGAAAAGTTTAGTTaGCAGACAGAGACCGAAGTG +
Preference number: 4 (lower is better)
Translates to: FNDNQAELFDTSRTGFFRLEKFS*QTETEV
Trigger: CACTTCGGTCTCTGTCTGTCAACTAAACTTTTCTAA...CCTAAAGAACCCAGTTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTCAAAGTAGCTCTTTaGCCATTGGCATTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: DSLSLEKFTPKLQTRENIFKVAL*PLAFPH
Trigger: ATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAA...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTCTGACTGCCCTGTTTTaGTCAAGTTCTGAAATGAGT +
Preference number: 4 (lower is better)
Translates to: DSLSLEKFTPKLQTRENILTALF*SSSEMS
Trigger: ACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAG...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTACATCAGATCCTGACTaGCCTGTTTTGCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSTSDPD*PVLLKF
Trigger: GAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGT...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCGAAAGAAAACCTCTCTaGCAGAAGGAACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: VHTKASDQGKYFGKISLSERKPL*QKELNS
Trigger: AGAGTTCAGTTCCTTCTGGCAGAGAGGTTTTCTTTC...GGAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTCAGTTTCCTCCATGCTaGAATGCTCTAGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFQFPPC*NALVLI
Trigger: GATGAGAACTAGAGCATTGCAGCATGGAGGAAACTG...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTTCACAGTTTCCTCCATaGTGCAATGCTCTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: EENYVFKVALCPLAFPHLSQFPP*CNALVL
Trigger: GAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGA...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCTCACAGTTTCCTCCATaGTGCAATGCTCTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SSHQSFRPGKIFWKDQSFSQFPP*CNALVL
Trigger: GAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGA...GAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTTGTTATCAGAAGGGTTaGAGATGGGCTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSCYQKG*RWAWNG
Trigger: ACCATTCCAAGCCCATCTCCAACCCTTCTGATAACA...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp GTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCAGGGGAATTTCCATTTaGATGGTCAATAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VHTKASDQGKYFGKISLSRGISI*MVNSVQ
Trigger: CTGGACACTATTGACCATCCAAATGGAAATTCCCCT...GGAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp GAATGTAGAAATATAGGCTCCACCCCACATCTAATGAATCAGATAATGCTTTTTTGCAGTCACCAGATATaGAAAGAAGTGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ECRNIGSTPHLMNQIMLFCSHQI*KEVAAL
Trigger: GAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCA...AAAAAGCATTATCTGATTCATTAGATGTGGGGTGGAGCCTATATTTCTACATTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR GCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTTTCAAAGTAGCTCTTTaGCCATTGGCATTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFFKVAL*PLAFPH
Trigger: ATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAA...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR GCA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAAAGTGTACATCTGACTTaGAGAACTAGACGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: REKFLSMTTKLNYSIPAESVHLT*RTRRVE
Trigger: CTCAACTCGTCTAGTTCTGCAAGTCAGATGTACACT...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACAAACCACATTGGGATaGCATTTACAGAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: REKFLSMTTKLNYSIPAEQTTLG*HLQKLR
Trigger: TCTGAGCTTCTGTAAATGCCATCCCAATGTGGTTTG...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
3UTR CAA 72 bp CGTCACAGATATGTGTATCTAGATGTTTCTAGTTTGTaGTCTAAAAAGGGCGAATGCAACAGCAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: RHRYVYLDVSSL*SKKGECNSNSN
Trigger: GTTGCTGTTGCTGTTGCATTCGCCCTTTTTAGACAACAAACTAGAAACATCTAGATACACATATCTGTGACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR TCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTGTTTTGCTCAAGTTCTaGAATGAGTGGCATGATGAA +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSVLLKF*NEWHDE
Trigger: TTCATCATGCCACTCATTTCAGAACTTGAGCAAAAC...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTTCCTTTCCAAGAAGCTaGACAGGAAACCCAATAAAT +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFSFPRS*TGNPIN
Trigger: ATTTATTGGGTTTCCTGTCCAGCTTCTTGGAAAGGA...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAATCATGTTTTCTCGCATaGAACATAAACTTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: REKFLSMTTKLNYSIPAESCFLA*NINLPY
Trigger: ATAGGGCAAGTTTATGTTTCATGCGAGAAAACATGA...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR TCA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAAACATTGTGGAAACAGTaGCCATCTATTAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKTLWKQ*PSINWE
Trigger: TTCCCAGTTAATAGATGGTCACTGTTTCCACAATGT...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR GCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTAGATCTTTTAGGAGGTaGAGGGAAAACATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFRSFRR*RENIQN
Trigger: ATTCTGAATGTTTTCCCTGCACCTCCTAAAAGATCT...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000409015.5
CDS-3UTR CCA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTTTTAACCTGCTGTTTTaGTTTGCTGCTGAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFFNLLF*FAAEVF
Trigger: AAAGACTTCAGCAGCAAACCAAAACAGCAGGTTAAA...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CCA 90 bp CAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCATTCTGTTAGGATTTAACCTGCTGTTTTaGTTTGCTGCTGAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: QSIGDVHLFPEEYTILLGFNLLF*FAAEVF
Trigger: AAAGACTTCAGCAGCAAACCAAAACAGCAGGTTAAA...TCCTAACAGAATGGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409015.5
CDS-3UTR CCA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAACTCATAAAAGCCCTTTaGAAAAACTGCAGACCAAAA +
Preference number: 4 (lower is better)
Translates to: REKFLSMTTKLNYSIPAELIKAL*KNCRPK
Trigger: TTTTGGTCTGCAGTTTTTCCAAAGGGCTTTTATGAG...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CCA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTACTCCTGACATGGCATaGAAGAAGAATTTTTATCAA +
Preference number: 4 (lower is better)
Translates to: RELCIQSSSLPIGISPSSTPDMA*KKNFYQ
Trigger: TTGATAAAAATTCTTCTTCCATGCCATGTCAGGAGT...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS TCA 90 bp TCCCGCTGCCGCCAAGACGAAGGGCGGGATTTAGGGGGCAGCTGCTaGTGTCGGCGCTCGCCTTCGGCTGCTTCGCTTACTGTCGCCGAG +
Preference number: 5 (lower is better)
Translates to: SRCRQDEGRDLGGSC*CRRSPSAASLTVAE
Trigger: CTCGGCGACAGTAAGCGAAGCAGCCGAAGGCGAGCGCCGACATCAGCAGCTGCCCCCTAAATCCCGCCCTTCGTCTTGGCGGCAGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS GCA 90 bp GCGGGATTTAGGGGGCAGCTGCTGATGTCGGCGCTCGCCTTCGGCTaGTTCGCTTACTGTCGCCGAGTGGGAGGCGAGCCTCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: AGFRGQLLMSALAFG*FAYCRRVGGEPLLP
Trigger: AGGAAGAAGAGGCTCGCCTCCCACTCGGCGACAGTAAGCGAAGCAGCCGAAGGCGAGCGCCGACATCAGCAGCTGCCCCCTAAATCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS-3UTR CAA 90 bp ACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCCAGACTGCTGGAGCCGTCTTTaGGGGTCTGGCCGTCCGCAC +
Preference number: 5 (lower is better)
Translates to: TKVQVQSPKQPPTSASPDCWSRL*GSGRPH
Trigger: GTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGCA...GTCTGGGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS TCA 90 bp TGGAGACGTTTCCTGCAGAAGGCCGTACTCCAGCTTCTTCTTGCTTaGCGCTTTCGGTGGCCAAGAGCGGCACGGCTCCCGCCGCTGCGA +
Preference number: 5 (lower is better)
Translates to: WRRFLQKAVLQLLLA*RFRWPRAARLPPLR
Trigger: TCGCAGCGGCGGGAGCCGTGCCGCTCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS GCA 90 bp TGGGTGGAGACGTTTCCTGCAGAAGGCCGTACTCCAGCTTCTTCTTaGTTGACGCTTTCGGTGGCCAAGAGCGGCACGGCTCCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: WVETFPAEGRTPASS*LTLSVAKSGTAPAA
Trigger: AGCGGCGGGAGCCGTGCCGCTCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS-3UTR CAA 90 bp GGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCAGAGCCTCCAGGCCGTaGGCTCAAGCTGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: GECNSNSNRIPRISHCCFRASRP*AQAGVG
Trigger: ACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTCT...GAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp AGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTGGCTCCGGATGCGACTaGGTAGAGCCTCCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: RANATATATASPESATAAGSGCD*VEPPGR
Trigger: ACGGCCTGGAGGCTCTACCAAGTCGCATCCGGAGCC...AGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCTGCTGGAGCCGTCTTTaGGGGTCTGGCCGTCCGCAC +
Preference number: 5 (lower is better)
Translates to: FHIPLHSPSEEERMEATSCWSRL*GSGRPH
Trigger: GTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGCA...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS CCA 90 bp GGATGCGACTTGGTAGAGCCTCCAGGCCGTTGGCTCAAGCTGGGGTaGGTGGAGACGTTTCCTGCAGAAGGCCGTACTCCAGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GCDLVEPPGRWLKLG*VETFPAEGRTPASS
Trigger: AGAAGAAGCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTCTACCAAGTCGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS-3UTR CAA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAAGAGCCTCCAGGCCGTaGGCTCAAGCTGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPRASRP*AQAGVG
Trigger: ACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTCT...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGGCTCCGGATGCGACTaGGTAGAGCCTCCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPGSGCD*VEPPGR
Trigger: ACGGCCTGGAGGCTCTACCAAGTCGCATCCGGAGCC...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGCTGGAGCCGTCTTTaGGGGTCTGGCCGTCCGCAC +
Preference number: 5 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGCWSRL*GSGRPH
Trigger: GTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGCA...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGCTCCGGATGCGACTaGGTAGAGCCTCCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: PLHSPSEEERMEATSINKGSGCD*VEPPGR
Trigger: ACGGCCTGGAGGCTCTACCAAGTCGCATCCGGAGCC...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGTTGCCTATCCCTTGCTGGAGCCGTCTTTaGGGGTCTGGCCGTCCGCAC +
Preference number: 5 (lower is better)
Translates to: ASWQMQAHYWVHLTLPIPCWSRL*GSGRPH
Trigger: GTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGCA...AGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS TCA 90 bp CCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTaGCGTTGCCTATCCCTCCTATCCCTCCCATGGACCTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PLLLHGKCKPTTGSI*RCLSLLSLPWTWLL
Trigger: GAGGAGCCAGGTCCATGGGAGGGATAGGAGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTAAGAGCCTCCAGGCCGTaGGCTCAAGCTGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLRASRP*AQAGVG
Trigger: ACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTCT...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGGGCTCCGGATGCGACTaGGTAGAGCCTCCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQGSGCD*VEPPGR
Trigger: ACGGCCTGGAGGCTCTACCAAGTCGCATCCGGAGCC...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTGGCTCCGGATGCGACTaGGTAGAGCCTCCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTGSGCD*VEPPGR
Trigger: ACGGCCTGGAGGCTCTACCAAGTCGCATCCGGAGCC...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp ATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCGGCTGGGATCTCCCTTaGGTCATAGCCGTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: MSPKCRCKAQSSPLPLPAGWDLP*VIAVFP
Trigger: TGGAAACACGGCTATGACCAAAGGGAGATCCCAGCC...GGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTGCCAGTGCTGTCTTTaGGAGTCTGCAGCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: KGECNSNSNRIPRISHCCCQCCL*ESAAPD
Trigger: ATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGCA...GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCGCCTTGGGGAGCTCCTaGTTATCAGAAGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: FHIPLHSPSEEERMEATSALGSS*LSEGLE
Trigger: CTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGC...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGGGCTGGGATCTCCCTTaGGTCATAGCCGTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQGWDLP*VIAVFP
Trigger: TGGAAACACGGCTATGACCAAAGGGAGATCCCAGCC...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAGGGGCCTTGGCCAGGTaGGGATGCAGAGAAAAACAG +
Preference number: 5 (lower is better)
Translates to: HIPLHSPSEEERMEATSIGALAR*GCREKQ
Trigger: CTGTTTTTCTCTGCATCCCAACCTGGCCAAGGCCCC...TATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCTCTCCCCAGGACTCTaGCTCAAGCAAGTCACGCCA +
Preference number: 5 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCLSPGL*LKQVTP
Trigger: TGGCGTGACTTGCTTGAGCAAGAGTCCTGGGGAGAG...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS CCA 90 bp CCAGAATCAGCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTaGGTCCATCTGACGTTGCCTATCCCTCCTATCCCTCCCATGGAC +
Preference number: 5 (lower is better)
Translates to: PESATAASWQMQAHY*VHLTLPIPPIPPMD
Trigger: GTCCATGGGAGGGATAGGAGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGCTGATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCCCAGCTTCTTCTTGCTaGACGCTTTCGGTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: EETVKGIERPGFEGLFTTPASSC*TLSVAK
Trigger: CTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGG...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGCCAGTGCTGTCTTTaGGAGTCTGCAGCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGCQCCL*ESAAPD
Trigger: ATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGCA...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAGCCTTGGGGAGCTCCTaGTTATCAGAAGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGALGSS*LSEGLE
Trigger: CTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGC...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCAGCCTTGGGGAGCTCCTaGTTATCAGAAGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ANATATATASPESATAASALGSS*LSEGLE
Trigger: CTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGC...TGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp GAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCTGTCAGCAAGCTGGTTaGTGTCAGCCTTGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: EQCHQSAGAKPKAAPYLCCQQAG*CQPWGA
Trigger: AGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACA...GCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATGGGGCCTTGGCCAGGTaGGGATGCAGAGAAAAACAG +
Preference number: 5 (lower is better)
Translates to: IPLHSPSEEERMEATSINGALAR*GCREKQ
Trigger: CTGTTTTTCTCTGCATCCCAACCTGGCCAAGGCCCC...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGACGGAGTCTCGCTCTATaGGCAGGTTGGAGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGRSLAL*AGWSSV
Trigger: CACTGAACTCCAACCTGCCAATAGAGCGAGACTCCG...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS GCA 90 bp TCAGAAGGGTTGGAGATGGGCTTGGAATGGTCTTTCCGGGAAGGCTaGTCTGGAACCACCTTGTTAGGGCTGTCTTTTGAGGTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SEGLEMGLEWSFREG*SGTTLLGLSFEVCS
Trigger: GGAGCAGACCTCAAAAGACAGCCCTAACAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS GCA 90 bp CCGCTTGTTGTGATGAGCGATATAGAGGACAGCCACAAGAATGGCTaGAGTCACCAGATATGCAAAGAAGTGGCTGCTCTCCGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: PLVVMSDIEDSHKNG*SHQICKEVAALRAA
Trigger: GGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCCTCTATATCGCTCATCACAACAAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 90 bp TTGGGGAGCTCCTTGTTATCAGAAGGGTTGGAGATGGGCTTGGAATaGTCTTTCCGGGAAGGCTGCTCTGGAACCACCTTGTTAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LGSSLLSEGLEMGLE*SFREGCSGTTLLGL
Trigger: CAGCCCTAACAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 90 bp TTGTGTCAGCCTTGGGGAGCTCCTTGTTATCAGAAGGGTTGGAGATaGGCTTGGAATGGTCTTTCCGGGAAGGCTGCTCTGGAACCACCT +
Preference number: 5 (lower is better)
Translates to: LCQPWGAPCYQKGWR*AWNGLSGKAALEPP
Trigger: AGGTGGTTCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 90 bp GCTGGTTTGTGTCAGCCTTGGGGAGCTCCTTGTTATCAGAAGGGTTaGAGATGGGCTTGGAATGGTCTTTCCGGGAAGGCTGCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: AGLCQPWGAPCYQKG*RWAWNGLSGKAALE
Trigger: TTCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACACAAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS-3UTR CAA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCCCAGCTTCTTCTTGCTaGACGCTTTCGGTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLPASSC*TLSVAK
Trigger: CTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGG...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCATACTCCAGCTTCTTCTaGCTTGACGCTTTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPYSSFF*LDAFGG
Trigger: GCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTA...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTCATGGCAATACTCCAGCTTCTTCTaGCTTGACGCTTTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: ATATATASPESATAASWQYSSFF*LDAFGG
Trigger: GCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTA...TTGCCATGAAGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGAGAGCCTCCAGGCCGTaGGCTCAAGCTGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LSLKSLVFLGRPERHQILRASRP*AQAGVG
Trigger: ACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTCT...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAAGAGCCTCCAGGCCGTaGGCTCAAGCTGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: SEEERMEATSINKGNTEERASRP*AQAGVG
Trigger: ACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTCT...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTGCTGGAGCCGTCTTTaGGGGTCTGGCCGTCCGCAC +
Preference number: 5 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKCWSRL*GSGRPH
Trigger: GTGCGGACGGCCAGACCCCAAAAGACGGCTCCAGCA...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTGCTCTGGAACCACCTaGTTAGGGCTGTCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: KGECNSNSNRIPRISHCCCSGTT*LGLSFE
Trigger: CTCAAAAGACAGCCCTAACAAGGTGGTTCCAGAGCA...GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp AAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTGGTTTGTGTCAGCCTaGGGGAGCTCCTTGTTATCA +
Preference number: 5 (lower is better)
Translates to: KGECNSNSNRIPRISHCCWFVSA*GSSLLS
Trigger: TGATAACAAGGAGCTCCCCAAGGCTGACACAAACCA...GCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp CCTTTGGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGATGTCAGCAAGCTGGTTaGTGTCAGCCTTGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: PLVIAVFPYTPPLTLRGGCQQAG*CQPWGA
Trigger: AGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACA...TCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGTCAGCAAGCTGGTTaGTGTCAGCCTTGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLCQQAG*CQPWGA
Trigger: AGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACA...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGTTGCCTATCCCTTGTCAGCAAGCTGGTTaGTGTCAGCCTTGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: ASWQMQAHYWVHLTLPIPCQQAG*CQPWGA
Trigger: AGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACA...AGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATTTTCTTTCTCTTCTTaGGGCGGTGAGCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGFSFSS*GGEPSS
Trigger: CGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAAA...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp ACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGCCCAGACATTCAAAGTAGCTCTTaGCCCATTGGCATTTCCCCA +
Preference number: 5 (lower is better)
Translates to: TKVQVQSPKQPPTSASPDIQSSS*PIGISP
Trigger: TGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAAT...GTCTGGGCTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AAAGGCACAGATGGGCACCCCACAGGAGGGGCCTTGGCCAGGTTGGGATGCAGACATCTCCCAAGTTATTaGTATTTCCCTGAGATCAGC +
Preference number: 5 (lower is better)
Translates to: KGTDGHPTGGALARLGCRHLPSY*YFPEIS
Trigger: GCTGATCTCAGGGAAATACAAATAACTTGGGAGATG...TCTGCATCCCAACCTGGCCAAGGCCCCTCCTGTGGGGTGCCCATCTGTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCAGACGAAACAGGCGGATaGGGGAAGGAGAAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPDETGG*GKEKEG
Trigger: TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTC...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTCTCCCCAGGACTCTaGCTCAAGCAAGTCACGCCA +
Preference number: 5 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPLSPGL*LKQVTP
Trigger: TGGCGTGACTTGCTTGAGCAAGAGTCCTGGGGAGAG...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS GCA 90 bp TGGCTGCAGTCACCAGATATGCAAAGAAGTGGCTGCTCTCCGCGCTaGCATTTCCAGAACCGTTCGGATAAAGGTCATCCTTCTCGCTAC +
Preference number: 5 (lower is better)
Translates to: WLQSPDMQRSGCSPR*HFQNRSDKGHPSRY
Trigger: GTAGCGAGAAGGATGACCTTTATCCGAACGGTTCTGGAAATGGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS-3UTR CAA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCAGAGCCTCCAGGCCGTaGGCTCAAGCTGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTRASRP*AQAGVG
Trigger: ACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTCT...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
CDS-3UTR CAA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCATGCCAGTGCTGTCTTTaGGAGTCTGCAGCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: TSTCSFPLGLQRETVQSACQCCL*ESAAPD
Trigger: ATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGCA...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CCAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACATGCCAGTGCTGTCTTTaGGAGTCTGCAGCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: PKKHGKLESRGHSRNKGTCQCCL*ESAAPD
Trigger: ATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGCA...TGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATATGCTCTGGAACCACCTaGTTAGGGCTGTCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: HIPLHSPSEEERMEATSICSGTT*LGLSFE
Trigger: CTCAAAAGACAGCCCTAACAAGGTGGTTCCAGAGCA...TATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTGGGTTGGAGATGGGCTaGGAATGGTCTTTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPGLEMG*EWSFRE
Trigger: TTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCC...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGTTGTTATCAGAAGGGTaGGAGATGGGCTTGGAATGG +
Preference number: 5 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQLLSEG*EMGLEW
Trigger: CCATTCCAAGCCCATCTCCAACCCTTCTGATAACAA...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGGGCGAATGCAACAGCAACAGCAACCGCATCCCCAGAATCAGCCACTGCTGCTTTGTTATCAGAAGGGTaGGAGATGGGCTTGGAATGG +
Preference number: 5 (lower is better)
Translates to: RANATATATASPESATAALLSEG*EMGLEW
Trigger: CCATTCCAAGCCCATCTCCAACCCTTCTGATAACAA...AGCAGCAGTGGCTGATTCTGGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGGCCTTGGGGAGCTCCTaGTTATCAGAAGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQALGSS*LSEGLE
Trigger: CTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGC...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR CAA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTAGCCTTGGGGAGCTCCTaGTTATCAGAAGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLALGSS*LSEGLE
Trigger: CTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGC...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGTTTGTGTCAGCCTaGGGGAGCTCCTTGTTATCA +
Preference number: 5 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGWFVSA*GSSLLS
Trigger: TGATAACAAGGAGCTCCCCAAGGCTGACACAAACCA...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCATGGTTTGTGTCAGCCTaGGGGAGCTCCTTGTTATCA +
Preference number: 5 (lower is better)
Translates to: RVSIYPSTHPQRRNGWKPWFVSA*GSSLLS
Trigger: TGATAACAAGGAGCTCCCCAAGGCTGACACAAACCA...TGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp TGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCGGAGAAAGCTTCCCTTaGTCAGCAAGCTGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: CFHIPLHSPSEEERMEATGESFP*SASWFV
Trigger: CACAAACCAGCTTGCTGACAAAGGGAAGCTTTCTCC...GGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGAGGAGAAAGCTTCCCTTaGTCAGCAAGCTGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGGESFP*SASWFV
Trigger: CACAAACCAGCTTGCTGACAAAGGGAAGCTTTCTCC...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGTTGCCTATCCCTTTTTCTTTCTCTTCTTaGGGCGGTGAGCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ASWQMQAHYWVHLTLPIPFSFSS*GGEPSS
Trigger: CGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAAA...AGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCAGGCTGGGATCTCCCTTaGGTCATAGCCGTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAGWDLP*VIAVFP
Trigger: TGGAAACACGGCTATGACCAAAGGGAGATCCCAGCC...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp TTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCGTAGCTCTTTGCCCATaGGCATTTCCCCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: FHIPLHSPSEEERMEATSVALCP*AFPHLL
Trigger: TAGAAGATGGGGAAATGCCAATGGGCAAAGAGCTAC...GCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACGGAGTCTCGCTCTATaGGCAGGTTGGAGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLRSLAL*AGWSSV
Trigger: CACTGAACTCCAACCTGCCAATAGAGCGAGACTCCG...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTCTCTCCCCAGGACTCTaGCTCAAGCAAGTCACGCCA +
Preference number: 5 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFLSPGL*LKQVTP
Trigger: TGGCGTGACTTGCTTGAGCAAGAGTCCTGGGGAGAG...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS GCA 90 bp AGCGATATAGAGGACAGCCACAAGAATGGCTGCAGTCACCAGATATaGAAAGAAGTGGCTGCTCTCCGCGCTGCCATTTCCAGAACCGTT +
Preference number: 5 (lower is better)
Translates to: SDIEDSHKNGCSHQI*KEVAALRAAISRTV
Trigger: AACGGTTCTGGAAATGGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCCTCTATATCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 90 bp CATTTCCAGAACCGTTCGGATAAAGGTCATCCTTCTCGCTACCCGTaGAATCCGAAAGTGTCCCTTCACGGTTCTCACTGGAGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: HFQNRSDKGHPSRYP*NPKVSLHGSHWRQN
Trigger: GTTCTGCCTCCAGTGAGAACCGTGAAGGGACACTTTCGGATTCCACGGGTAGCGAGAAGGATGACCTTTATCCGAACGGTTCTGGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 90 bp TCTTCCGCTTGTTGTGATGAGCGATATAGAGGACAGCCACAAGAATaGCTGCAGTCACCAGATATGCAAAGAAGTGGCTGCTCTCCGCGC +
Preference number: 5 (lower is better)
Translates to: SSACCDERYRGQPQE*LQSPDMQRSGCSPR
Trigger: GCGCGGAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCCTCTATATCGCTCATCACAACAAGCGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS-3UTR CAA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATCCAGCTTCTTCTTGCTaGACGCTTTCGGTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHPASSC*TLSVAK
Trigger: CTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGG...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTTACTCCAGCTTCTTCTaGCTTGACGCTTTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPYSSFF*LDAFGG
Trigger: GCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTA...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTTGCCAGTGCTGTCTTTaGGAGTCTGCAGCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFCQCCL*ESAAPD
Trigger: ATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGCA...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAATGCTCTGGAACCACCTaGTTAGGGCTGTCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: PLHSPSEEERMEATSINKCSGTT*LGLSFE
Trigger: CTCAAAAGACAGCCCTAACAAGGTGGTTCCAGAGCA...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGGGGTTGGAGATGGGCTaGGAATGGTCTTTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKGLEMG*EWSFRE
Trigger: TTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCC...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATTGGTTTGTGTCAGCCTaGGGGAGCTCCTTGTTATCA +
Preference number: 5 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDWFVSA*GSSLLS
Trigger: TGATAACAAGGAGCTCCCCAAGGCTGACACAAACCA...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAATGGTTTGTGTCAGCCTaGGGGAGCTCCTTGTTATCA +
Preference number: 5 (lower is better)
Translates to: PLHSPSEEERMEATSINKWFVSA*GSSLLS
Trigger: TGATAACAAGGAGCTCCCCAAGGCTGACACAAACCA...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTTTTTCTTTCTCTTCTTaGGGCGGTGAGCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTFSFSS*GGEPSS
Trigger: CGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAAA...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTTTTTCTTTCTCTTCTTaGGGCGGTGAGCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPFSFSS*GGEPSS
Trigger: CGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAAA...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCGTAGCTCTTTGCCCATaGGCATTTCCCCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: EETVKGIERPGFEGLFTTVALCP*AFPHLL
Trigger: TAGAAGATGGGGAAATGCCAATGGGCAAAGAGCTAC...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGACCTGCTGTTTTGGTTaGCTGCTGAAGTCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQTCCFG*LLKSLK
Trigger: CTTCAAAGACTTCAGCAGCAAACCAAAACAGCAGGT...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAGAAGGCAAAGGACCATTaGTCAGAGACACCAAGAAAG +
Preference number: 5 (lower is better)
Translates to: QCHQSAGAKPKAAPYLCQKAKDH*SETPRK
Trigger: CTTTCTTGGTGTCTCTGACAAATGGTCCTTTGCCTT...CTGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATTGTGGGACCCCTCATTaGAGTCACATCCATATGGCA +
Preference number: 5 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDCGTPH*SHIHMA
Trigger: TGCCATATGGATGTGACTCAAATGAGGGGTCCCACA...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS CCA 90 bp GAGGAGAAAGCTTCCCTTTGTCAGCAAGCTGGTTTGTGTCAGCCTTaGGGAGCTCCTTGTTATCAGAAGGGTTGGAGATGGGCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: EEKASLCQQAGLCQP*GAPCYQKGWRWAWN
Trigger: ATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGGGAAGCTTTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 90 bp CTCCTTCCTTACCTTCTGGTCCAAACGTTGGTAGTCACTGGCCTTTaGCCGCCGGGTGACTTTAGATCTTTTTCCTTCCAGGACAAAAGC +
Preference number: 5 (lower is better)
Translates to: LLPYLLVQTLVVTGL*PPGDFRSFSFQDKS
Trigger: GCTTTTGTCCTGGAAGGAAAAAGATCTAAAGTCACCCGGCGGCCAAAGGCCAGTGACTACCAACGTTTGGACCAGAAGGTAAGGAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATTACTCCAGCTTCTTCTaGCTTGACGCTTTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHYSSFF*LDAFGG
Trigger: GCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTA...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCATGCTCTGGAACCACCTaGTTAGGGCTGTCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: TSTCSFPLGLQRETVQSACSGTT*LGLSFE
Trigger: CTCAAAAGACAGCCCTAACAAGGTGGTTCCAGAGCA...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp ATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATTTGTTATCAGAAGGGTaGGAGATGGGCTTGGAATGG +
Preference number: 5 (lower is better)
Translates to: IPLHSPSEEERMEATSINLLSEG*EMGLEW
Trigger: CCATTCCAAGCCCATCTCCAACCCTTCTGATAACAA...ATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTGGAGAAAGCTTCCCTTaGTCAGCAAGCTGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPGESFP*SASWFV
Trigger: CACAAACCAGCTTGCTGACAAAGGGAAGCTTTCTCC...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTATTTTCTTTCTCTTCTTaGGGCGGTGAGCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLFSFSS*GGEPSS
Trigger: CGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAAA...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCGTAGCTCTTTGCCCATaGGCATTTCCCCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: EEQCHQSAGAKPKAAPYLVALCP*AFPHLL
Trigger: TAGAAGATGGGGAAATGCCAATGGGCAAAGAGCTAC...GAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp TGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAACATACTGGAGAAGTaGAGCAGCGGGATGAATAAC +
Preference number: 5 (lower is better)
Translates to: CFHIPLHSPSEEERMEATNILEK*SSGMNN
Trigger: GTTATTCATCCCGCTGCTCAACTTCTCCAGTATGTT...GGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAGCCAAGACAAAGACTaGGGAATCACTCACTCCGAG +
Preference number: 5 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTSQDKD*GITHSE
Trigger: CTCGGAGTGAGTGATTCCCAAGTCTTTGTCTTGGCT...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGGACGAAACAGGCGGATaGGGGAAGGAGAAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKDETGG*GKEKEG
Trigger: TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTC...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCATGGCTTACTGGCAGTTaGACATACTATACAGCTCAG +
Preference number: 5 (lower is better)
Translates to: VSIYPSTHPQRRNGWKPPWLTGS*TYYTAQ
Trigger: CTGAGCTGTATAGTATGTCAAACTGCCAGTAAGCCA...TGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CTATTAAAGTTTATGGAGCGCTGGCAGAATGCAGAAAGCTCAGGACTGGGAGACTGGGTCCATCTGACGTaGCCTATCCCTCCTATCCCT +
Preference number: 5 (lower is better)
Translates to: LLKFMERWQNAESSGLGDWVHLT*PIPPIP
Trigger: AGGGATAGGAGGGATAGGCAACGTCAGATGGACCCA...GTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCATAAACTTTAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS TCA 90 bp ATCATCATCTTCAGCCTCTTTGGGCTCCACATCCTCAGTAGGCTCTaGAGACTTAACTTCCTCCTGCGGGGGAGAAATGAGGTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: IIIFSLFGLHILSRL*RLNFLLRGRNEVSF
Trigger: GAAACTGACCTCATTTCTCCCCCGCAGGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGATGTGGAGCCCAAAGAGGCTGAAGATGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS-3UTR CAA 90 bp CAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCATTCTGTTAGGAGGCTCCGGATGCGACTaGGTAGAGCCTCCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: QSIGDVHLFPEEYTILLGGSGCD*VEPPGR
Trigger: ACGGCCTGGAGGCTCTACCAAGTCGCATCCGGAGCC...TCCTAACAGAATGGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409015.5
CDS-3UTR CAA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAGGGTTGGAGATGGGCTaGGAATGGTCTTTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: SEEERMEATSINKGNTEEGLEMG*EWSFRE
Trigger: TTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCC...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CAAAGAAACATGGGAAGCTGGAAAGTCGAGGGCACAGCCGGAATAAAGGCACAGTTGTTATCAGAAGGGTaGGAGATGGGCTTGGAATGG +
Preference number: 5 (lower is better)
Translates to: QRNMGSWKVEGTAGIKAQLLSEG*EMGLEW
Trigger: CCATTCCAAGCCCATCTCCAACCCTTCTGATAACAA...CTGTGCCTTTATTCCGGCTGTGCCCTCGACTTTCCAGCTTCCCATGTTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR CAA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAATGTCAGCAAGCTGGTTaGTGTCAGCCTTGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: SEEERMEATSINKGNTEECQQAG*CQPWGA
Trigger: AGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACA...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAGGAGAAAGCTTCCCTTaGTCAGCAAGCTGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLGESFP*SASWFV
Trigger: CACAAACCAGCTTGCTGACAAAGGGAAGCTTTCTCC...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCAGTAGCTCTTTGCCCATaGGCATTTCCCCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAVALCP*AFPHLL
Trigger: TAGAAGATGGGGAAATGCCAATGGGCAAAGAGCTAC...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GGTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGACTTCAAACAATAGTGTaGTCCAAGACACTACCCTCA +
Preference number: 5 (lower is better)
Translates to: GHSRVSIYPSTHPQRRNGLQTIV*SKTLPS
Trigger: TGAGGGTAGTGTCTTGGACAACACTATTGTTTGAAG...TCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GGAAACAAACTGGGCCCTGACGAAACAGGCGGATTGGGGAAGGAGAAAGAAGGAAACATACTGGAGAAGTaGAGCAGCGGGATGAATAAC +
Preference number: 5 (lower is better)
Translates to: GNKLGPDETGGLGKEKEGNILEK*SSGMNN
Trigger: GTTATTCATCCCGCTGCTCAACTTCTCCAGTATGTT...TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTCAGGGCCCAGTTTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATAACATACTGGAGAAGTaGAGCAGCGGGATGAATAAC +
Preference number: 5 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDNILEK*SSGMNN
Trigger: GTTATTCATCCCGCTGCTCAACTTCTCCAGTATGTT...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGCGGAGTCTCGCTCTATaGGCAGGTTGGAGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: LSLKSLVFLGRPERHQILRSLAL*AGWSSV
Trigger: CACTGAACTCCAACCTGCCAATAGAGCGAGACTCCG...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCACAAAACCAAACCACATaGGGATGGCATTTACAGAAG +
Preference number: 5 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPQNQTT*GWHLQK
Trigger: CTTCTGTAAATGCCATCCCAATGTGGTTTGGTTTTG...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS CCA 90 bp ATTCTGTTAGGACTTCTGGTCCAAACGTTGGTAGTCACTGGCCTTTaGCCGCCGGGTGACTTTAGATCTTTTTCCTTCCAGGACAAAAGC +
Preference number: 5 (lower is better)
Translates to: ILLGLLVQTLVVTGL*PPGDFRSFSFQDKS
Trigger: GCTTTTGTCCTGGAAGGAAAAAGATCTAAAGTCACCCGGCGGCCAAAGGCCAGTGACTACCAACGTTTGGACCAGAAGTCCTAACAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAATACTCCAGCTTCTTCTaGCTTGACGCTTTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: SEEERMEATSINKGNTEEYSSFF*LDAFGG
Trigger: GCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTA...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCTGCCAGTGCTGTCTTTaGGAGTCTGCAGCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTCQCCL*ESAAPD
Trigger: ATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGCA...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
CDS-3UTR CAA 90 bp CTATTAAAGTTTATGGAGCGCTGGCAGAATGCAGAAAGCTCAGGACTGGGAGACGGAGAAAGCTTCCCTTaGTCAGCAAGCTGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: LLKFMERWQNAESSGLGDGESFP*SASWFV
Trigger: CACAAACCAGCTTGCTGACAAAGGGAAGCTTTCTCC...GTCTCCCAGTCCTGAGCTTTCTGCATTCTGCCAGCGCTCCATAAACTTTAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp GACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTATTCAAAGTAGCTCTTaGCCCATTGGCATTTCCCCA +
Preference number: 5 (lower is better)
Translates to: DSGLTARKPKFCFMLGTTIQSSS*PIGISP
Trigger: TGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAAT...AGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTACCTGCTGTTTTGGTTaGCTGCTGAAGTCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPTCCFG*LLKSLK
Trigger: CTTCAAAGACTTCAGCAGCAAACCAAAACAGCAGGT...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GAGGAGACAGTCAAAGGAATAGAGAGGCCTGGCTTTGAGGGCCTCTTCACCACCACAACTAAGTGGAAGTaGATTCACTTTGTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: EETVKGIERPGFEGLFTTTTKWK*IHFVSS
Trigger: GCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGT...GGTGGTGAAGAGGCCCTCAAAGCCAGGCCTCTCTATTCCTTTGACTGTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAACAACTAAGTGGAAGTaGATTCACTTTGTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: HIPLHSPSEEERMEATSITTKWK*IHFVSS
Trigger: GCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGT...TATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GTCATAGCCGTGTTTCCATATACCCCTCCACTCACCCTCAGAGGAGGAACGGATCATCTCCCAAGTTATTaGTATTTCCCTGAGATCAGC +
Preference number: 5 (lower is better)
Translates to: VIAVFPYTPPLTLRGGTDHLPSY*YFPEIS
Trigger: GCTGATCTCAGGGAAATACAAATAACTTGGGAGATG...ATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGGTATATGGAAACACGGCTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAACATCTCCCAAGTTATTaGTATTTCCCTGAGATCAGC +
Preference number: 5 (lower is better)
Translates to: PLHSPSEEERMEATSINKHLPSY*YFPEIS
Trigger: GCTGATCTCAGGGAAATACAAATAACTTGGGAGATG...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTAAAGGCAAAGGACCATTaGTCAGAGACACCAAGAAAG +
Preference number: 5 (lower is better)
Translates to: HRRTMSPKCRCKAQSSPLKAKDH*SETPRK
Trigger: CTTTCTTGGTGTCTCTGACAAATGGTCCTTTGCCTT...TAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp ACAGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAACCTGCTGTTTTGGTTaGCTGCTGAAGTCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: TVASLPGSPSSVLCSVQLTCCFG*LLKSLK
Trigger: CTTCAAAGACTTCAGCAGCAAACCAAAACAGCAGGT...TAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGAACCTGCTGTTTTGGTTaGCTGCTGAAGTCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGTCCFG*LLKSLK
Trigger: CTTCAAAGACTTCAGCAGCAAACCAAAACAGCAGGT...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp ACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTCTGCCAAAGGCAAAATGGACTTaGTGGGAAATGTATCTCATA +
Preference number: 5 (lower is better)
Translates to: TMSPKCRCKAQSSPLPLPKAKWT*WEMYLI
Trigger: TATGAGATACATTTCCCACAAAGTCCATTTTGCCTT...TGGCAGAGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp ACTTCCACCTGCAGTTTTCCCCTAGGTCTGCAGAGAGAAACAGTGCAGAGTGCATTCAGACTTACTGCCTaGACAGCACAGAATTCATCT +
Preference number: 5 (lower is better)
Translates to: TSTCSFPLGLQRETVQSAFRLTA*TAQNSS
Trigger: AGATGAATTCTGTGCTGTCAAGGCAGTAAGTCTGAA...TGCACTCTGCACTGTTTCTCTCTGCAGACCTAGGGGAAAACTGCAGGTGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTGGGGCCTTGGCCAGGTaGGGATGCAGAGAAAAACAG +
Preference number: 5 (lower is better)
Translates to: DSLSLEKFTPKLQTRENIGALAR*GCREKQ
Trigger: CTGTTTTTCTCTGCATCCCAACCTGGCCAAGGCCCC...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GGCAGGAGGGTGTCAATCTATAGCATCCTGAACCCCAAAAGGTCTGTAACTGGATGGCTTACTGGCAGTTaGACATACTATACAGCTCAG +
Preference number: 5 (lower is better)
Translates to: GRRVSIYSILNPKRSVTGWLTGS*TYYTAQ
Trigger: CTGAGCTGTATAGTATGTCAAACTGCCAGTAAGCCA...TCCAGTTACAGACCTTTTGGGGTTCAGGATGCTATAGATTGACACCCTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp ACAGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACACAACTAAGTGGAAGTaGATTCACTTTGTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: TEEQCHQSAGAKPKAAPYTTKWK*IHFVSS
Trigger: GCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGT...GTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGAAGAACAATGTCACCAAAGTGCAGGTGCAAAGCCCAAAGCAGCCCCCTACCTACAACTAAGTGGAAGTaGATTCACTTTGTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: RRTMSPKCRCKAQSSPLPTTKWK*IHFVSS
Trigger: GCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGT...AGGTAGGGGGCTGCTTTGGGCTTTGCACCTGCACTTTGGTGACATTGTTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp CCCCTCCACTCACCCTCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAATACACTGAGGTAAAATaGGCAGAGAGTATAGTTTCT +
Preference number: 5 (lower is better)
Translates to: PLHSPSEEERMEATSINKYTEVK*AESIVS
Trigger: AGAAACTATACTCTCTGCCAATTTTACCTCAGTGTA...TTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGAGGGTGAGTGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CACAGGATCTGGTGCCTCACAGTTTCCTCCATGCTGCAATGCTCTAGTTCTCATCTTCAAACAATAGTGTaGTCCAAGACACTACCCTCA +
Preference number: 5 (lower is better)
Translates to: HRIWCLTVSSMLQCSSSHLQTIV*SKTLPS
Trigger: TGAGGGTAGTGTCTTGGACAACACTATTGTTTGAAG...ATGAGAACTAGAGCATTGCAGCATGGAGGAAACTGTGAGGCACCAGATCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CCAGACCCGCCACTAAATTCTAGAGGAGGGTGTCTCTCAGGTCACAGTACTTTTTTCAGACTTACTGCCTaGACAGCACAGAATTCATCT +
Preference number: 5 (lower is better)
Translates to: PDPPLNSRGGCLSGHSTFFRLTA*TAQNSS
Trigger: AGATGAATTCTGTGCTGTCAAGGCAGTAAGTCTGAA...AAAAGTACTGTGACCTGAGAGACACCCTCCTCTAGAATTTAGTGGCGGGTCTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTTGGAAAGATCAGTCTTTCCCAGCTTCTTCTTGCTaGACGCTTTCGGTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SSHQSFRPGKIFWKDQSFPASSC*TLSVAK
Trigger: CTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGG...GAAAGACTGATCTTTCCAAAATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCCAGCTTCTTCTTGCTaGACGCTTTCGGTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: EENYVFKVALCPLAFPHLPASSC*TLSVAK
Trigger: CTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGG...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTGGGTTGGAGATGGGCTaGGAATGGTCTTTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: EENYVFKVALCPLAFPHLGLEMG*EWSFRE
Trigger: TTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCC...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCTTGTTATCAGAAGGGTaGGAGATGGGCTTGGAATGG +
Preference number: 5 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTLLSEG*EMGLEW
Trigger: CCATTCCAAGCCCATCTCCAACCCTTCTGATAACAA...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377386.8
ENST00000409015.5
CDS-3UTR CAA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAAGGCTGGGATCTCCCTTaGGTCATAGCCGTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: REKFLSMTTKLNYSIPAEGWDLP*VIAVFP
Trigger: TGGAAACACGGCTATGACCAAAGGGAGATCCCAGCC...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp ACGAGAGCAGCACAATCCATTGGTGACGTTCATCTTTTTCCAGAGGAATATACCGTAGCTCTTTGCCCATaGGCATTTCCCCATCTTCTA +
Preference number: 5 (lower is better)
Translates to: TRAAQSIGDVHLFPEEYTVALCP*AFPHLL
Trigger: TAGAAGATGGGGAAATGCCAATGGGCAAAGAGCTAC...GGTATATTCCTCTGGAAAAAGATGAACGTCACCAATGGATTGTGCTGCTCTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
CDS-3UTR CAA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGATTCAAAGTAGCTCTTaGCCCATTGGCATTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LSLKSLVFLGRPERHQILIQSSS*PIGISP
Trigger: TGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAAT...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp TTTCTTAGGGAGACCAGAAAGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGATTCAAAGTAGCTCTTaGCCCATTGGCATTTCCCCA +
Preference number: 5 (lower is better)
Translates to: FLRETRKTSDPDCPVLLKIQSSS*PIGISP
Trigger: TGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAAT...CTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTTTTTCTTTCTCTTCTTaGGGCGGTGAGCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RELCIQSSSLPIGISPSSFSFSS*GGEPSS
Trigger: CGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAAA...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGTGGCCTCACTGCCAGGAAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTACACTGAGGTAAAATaGGCAGAGAGTATAGTTTCT +
Preference number: 5 (lower is better)
Translates to: SGLTARKPKFCFMLGTTKYTEVK*AESIVS
Trigger: AGAAACTATACTCTCTGCCAATTTTACCTCAGTGTA...CTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTTCCTGGCAGTGAGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGCTTCAAACAATAGTGTaGTCCAAGACACTACCCTCA +
Preference number: 5 (lower is better)
Translates to: RHQILTALFCSSSEMSGMLQTIV*SKTLPS
Trigger: TGAGGGTAGTGTCTTGGACAACACTATTGTTTGAAG...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGAGCCAAGACAAAGACTaGGGAATCACTCACTCCGAG +
Preference number: 5 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTSQDKD*GITHSE
Trigger: CTCGGAGTGAGTGATTCCCAAGTCTTTGTCTTGGCT...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GAAGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTGACGAAACAGGCGGATaGGGGAAGGAGAAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: EENYVFKVALCPLAFPHLDETGG*GKEKEG
Trigger: TCCTTCTTTCTCCTTCCCCAATCCGCCTGTTTCGTC...AAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GATTCTCTAAGCCTTGAGAAGTTCACACCAAAGCTTCAGACCAGGGAAAATATTTGTGGGACCCCTCATTaGAGTCACATCCATATGGCA +
Preference number: 5 (lower is better)
Translates to: DSLSLEKFTPKLQTRENICGTPH*SHIHMA
Trigger: TGCCATATGGATGTGACTCAAATGAGGGGTCCCACA...AATATTTTCCCTGGTCTGAAGCTTTGGTGTGAACTTCTCAAGGCTTAGAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CTGTCCCTCAAGAGCTTAGTTTTCTTAGGGAGACCAGAAAGACATCAGATCCTGCAAAACCAAACCACATaGGGATGGCATTTACAGAAG +
Preference number: 5 (lower is better)
Translates to: LSLKSLVFLGRPERHQILQNQTT*GWHLQK
Trigger: CTTCTGTAAATGCCATCCCAATGTGGTTTGGTTTTG...CAGGATCTGATGTCTTTCTGGTCTCCCTAAGAAAACTAAGCTCTTGAGGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AGACATCAGATCCTGACTGCCCTGTTTTGCTCAAGTTCTGAAATGAGTGGCATGCAAAACCAAACCACATaGGGATGGCATTTACAGAAG +
Preference number: 5 (lower is better)
Translates to: RHQILTALFCSSSEMSGMQNQTT*GWHLQK
Trigger: CTTCTGTAAATGCCATCCCAATGTGGTTTGGTTTTG...CATGCCACTCATTTCAGAACTTGAGCAAAACAGGGCAGTCAGGATCTGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp TCTAGTTTGTTGTCTAAAAAGGGCGAATGCAACAGCAACAGCAACCGCATCCCCGATGTTTCTAGTTTGTaGTCTAAAAAGGGCGAATGC +
Preference number: 5 (lower is better)
Translates to: SSLLSKKGECNSNSNRIPDVSSL*SKKGEC
Trigger: GCATTCGCCCTTTTTAGACAACAAACTAGAAACATC...GGGGATGCGGTTGCTGTTGCTGTTGCATTCGCCCTTTTTAGACAACAAACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAATACTCCAGCTTCTTCTaGCTTGACGCTTTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKYSSFF*LDAFGG
Trigger: GCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTA...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAATGCTCTGGAACCACCTaGTTAGGGCTGTCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: REKFLSMTTKLNYSIPAECSGTT*LGLSFE
Trigger: CTCAAAAGACAGCCCTAACAAGGTGGTTCCAGAGCA...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000377386.8
CDS-3UTR CAA 90 bp GAATGTAGAAATATAGGCTCCACCCCACATCTAATGAATCAGATAATGCTTTTTGGGTTGGAGATGGGCTaGGAATGGTCTTTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: ECRNIGSTPHLMNQIMLFGLEMG*EWSFRE
Trigger: TTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCC...AAAAAGCATTATCTGATTCATTAGATGTGGGGTGGAGCCTATATTTCTACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS-3UTR CAA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAACAACTAAGTGGAAGTaGATTCACTTTGTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: SEEERMEATSINKGNTEETTKWK*IHFVSS
Trigger: GCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGT...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
CDS-3UTR CAA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTTGTGGGACCCCTCATTaGAGTCACATCCATATGGCA +
Preference number: 5 (lower is better)
Translates to: RELCIQSSSLPIGISPSSCGTPH*SHIHMA
Trigger: TGCCATATGGATGTGACTCAAATGAGGGGTCCCACA...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp TCAGAGGAGGAACGGATGGAAGCCACCAGCATAAATAAAGGGAACACAGAAGAAAAGGCAAAATGGACTTaGTGGGAAATGTATCTCATA +
Preference number: 5 (lower is better)
Translates to: SEEERMEATSINKGNTEEKAKWT*WEMYLI
Trigger: TATGAGATACATTTCCCACAAAGTCCATTTTGCCTT...TTCTTCTGTGTTCCCTTTATTTATGCTGGTGGCTTCCATCCGTTCCTCCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp ATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTGTCTCAAGCTACATAAAAAGCCAAGACAAAGACTaGGGAATCACTCACTCCGAG +
Preference number: 5 (lower is better)
Translates to: MLGTTKWKLIHFVSSYIKSQDKD*GITHSE
Trigger: CTCGGAGTGAGTGATTCCCAAGTCTTTGTCTTGGCT...TTTTATGTAGCTTGAGACAAAGTGAATCAACTTCCACTTAGTTGTACCGAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp CTAGAGAAGCCTAGAAGATTCCTCAGGTTGGTGCAAAGTATTATAAGACTAACGTGGCTTACTGGCAGTTaGACATACTATACAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LEKPRRFLRLVQSIIRLTWLTGS*TYYTAQ
Trigger: CTGAGCTGTATAGTATGTCAAACTGCCAGTAAGCCA...CGTTAGTCTTATAATACTTTGCACCAACCTGAGGAATCTTCTAGGCTTCTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTAAGGCAAAGGACCATTaGTCAGAGACACCAAGAAAG +
Preference number: 5 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFKAKDH*SETPRK
Trigger: CTTTCTTGGTGTCTCTGACAAATGGTCCTTTGCCTT...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AGAGAATTATGTATTCAAAGTAGCTCTTTGCCCATTGGCATTTCCCCATCTTCTGACTTAACTTCCTCCTaGTTAGGGCTGTCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: RELCIQSSSLPIGISPSSDLTSS*LGLSFE
Trigger: CTCAAAAGACAGCCCTAACAAGGAGGAAGTTAAGTC...AGAAGATGGGGAAATGCCAATGGGCAAAGAGCTACTTTGAATACATAATTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398263.6
CDS-3UTR CAA 90 bp AAGCCCAAGTTCTGTTTTATGCTCGGTACAACTAAGTGGAAGTTGATTCACTTTTTCAGACTTACTGCCTaGACAGCACAGAATTCATCT +
Preference number: 5 (lower is better)
Translates to: KPKFCFMLGTTKWKLIHFFRLTA*TAQNSS
Trigger: AGATGAATTCTGTGCTGTCAAGGCAGTAAGTCTGAA...AAAGTGAATCAACTTCCACTTAGTTGTACCGAGCATAAAACAGAACTTGGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp AGAGAGAAATTCCTTTCAATGACAACCAAGCTGAACTATTCGATACCAGCAGAATACACTGAGGTAAAATaGGCAGAGAGTATAGTTTCT +
Preference number: 5 (lower is better)
Translates to: REKFLSMTTKLNYSIPAEYTEVK*AESIVS
Trigger: AGAAACTATACTCTCTGCCAATTTTACCTCAGTGTA...TTCTGCTGGTATCGAATAGTTCAGCTTGGTTGTCATTGAAAGGAATTTCTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
CDS-3UTR CAA 90 bp GAATGTAGAAATATAGGCTCCACCCCACATCTAATGAATCAGATAATGCTTTTTCTAGATGTTTCTAGTTaGTTGTCTAAAAAGGGCGAA +
Preference number: 5 (lower is better)
Translates to: ECRNIGSTPHLMNQIMLFLDVSS*LSKKGE
Trigger: TTCGCCCTTTTTAGACAACAAACTAGAAACATCTAG...AAAAAGCATTATCTGATTCATTAGATGTGGGGTGGAGCCTATATTTCTACATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS GCA 72 bp TCCCGCCCCTGCTGCGCGCGTCTCTCAGTCTCCCGCTaGCGCCAAGACGAAGGGCGGGATTTAGGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SRPCCARLSVSR*RQDEGRDLGGS
Trigger: GCTGCCCCCTAAATCCCGCCCTTCGTCTTGGCGGCAGCGGGAGACTGAGAGACGCGCGCAGCAGGGGCGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS CCA 72 bp CTCCGCCTCGTACTTCCGAGACCTTACAGGCAGAGCTaGAGCTCCCTCGCCTCTCGCACTGGCCGCGGAAGT +
Preference number: 6 (lower is better)
Translates to: LRLVLPRPYRQS*SSLASRTGRGS
Trigger: ACTTCCGCGGCCAGTGCGAGAGGCGAGGGAGCTCCAGCTCTGCCTGTAAGGTCTCGGAAGTACGAGGCGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282120.6
CDS CAA 72 bp CGGCTCCGGATGCGACTTGGTAGAGCCTCCAGGCCGTaGGCTCAAGCTGGGGTGGGTGGAGACGTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: RLRMRLGRASRP*AQAGVGGDVSC
Trigger: GCAGGAAACGTCTCCACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTCTACCAAGTCGCATCCGGAGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS TCA 72 bp CGCCAAGACGAAGGGCGGGATTTAGGGGGCAGCTGCTaGTGTCGGCGCTCGCCTTCGGCTGCTTCGCTTACT +
Preference number: 6 (lower is better)
Translates to: RQDEGRDLGGSC*CRRSPSAASLT
Trigger: AGTAAGCGAAGCAGCCGAAGGCGAGCGCCGACATCAGCAGCTGCCCCCTAAATCCCGCCCTTCGTCTTGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS CCA 72 bp GGCTCCGGATGCGACTTGGTAGAGCCTCCAGGCCGTTaGCTCAAGCTGGGGTGGGTGGAGACGTTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: GSGCDLVEPPGR*LKLGWVETFPA
Trigger: TGCAGGAAACGTCTCCACCCACCCCAGCTTGAGCCAACGGCCTGGAGGCTCTACCAAGTCGCATCCGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 90 bp GTGGAGACGTTTCCTGCAGAAGGCCGTACTCCAGCTTCTTCTTGCTaGACGCTTTCGGTGGCCAAGAGCGGCACGGCTCCCGCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: VETFPAEGRTPASSC*TLSVAKSGTAPAAA
Trigger: CGCAGCGGCGGGAGCCGTGCCGCTCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 90 bp GTGGGTGGAGACGTTTCCTGCAGAAGGCCGTACTCCAGCTTCTTCTaGCTTGACGCTTTCGGTGGCCAAGAGCGGCACGGCTCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: VGGDVSCRRPYSSFF*LDAFGGQERHGSRR
Trigger: GCGGCGGGAGCCGTGCCGCTCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS TCA 72 bp TTCCTGCAGAAGGCCGTACTCCAGCTTCTTCTTGCTTaGCGCTTTCGGTGGCCAAGAGCGGCACGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: FLQKAVLQLLLA*RFRWPRAARLP
Trigger: CGGGAGCCGTGCCGCTCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTACGGCCTTCTGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 72 bp TTTCCTGCAGAAGGCCGTACTCCAGCTTCTTCTTGCTaGACGCTTTCGGTGGCCAAGAGCGGCACGGCTCCC +
Preference number: 6 (lower is better)
Translates to: FPAEGRTPASSC*TLSVAKSGTAP
Trigger: GGGAGCCGTGCCGCTCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTACGGCCTTCTGCAGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 90 bp GCTGCTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGTaGCCTATCCCTCCTATCCCTCCCATGGACCTGGCTCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: AASWQMQAHYWVHLT*PIPPIPPMDLAPPS
Trigger: GGAAGGAGGAGCCAGGTCCATGGGAGGGATAGGAGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS GCA 72 bp ACGTTTCCTGCAGAAGGCCGTACTCCAGCTTCTTCTTaGTTGACGCTTTCGGTGGCCAAGAGCGGCACGGCT +
Preference number: 6 (lower is better)
Translates to: TFPAEGRTPASS*LTLSVAKSGTA
Trigger: AGCCGTGCCGCTCTTGGCCACCGAAAGCGTCAAGCAAGAAGAAGCTGGAGTACGGCCTTCTGCAGGAAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS GCA 72 bp CCGTTGGCTCAAGCTGGGGTGGGTGGAGACGTTTCCTaGAGAAGGCCGTACTCCAGCTTCTTCTTGCTTGAC +
Preference number: 6 (lower is better)
Translates to: PLAQAGVGGDVS*RRPYSSFFLLD
Trigger: GTCAAGCAAGAAGAAGCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACCCACCCCAGCTTGAGCCAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 72 bp TTACTGTCGCCGAGTGGGAGGCGAGCCTCTTCTTCCTaGTTTCTCGTCTCCACCACAGCCACAACAGTCTGG +
Preference number: 6 (lower is better)
Translates to: LLSPSGRRASSS*FLVSTTATTVW
Trigger: CCAGACTGTTGTGGCTGTGGTGGAGACGAGAAACCAGGAAGAAGAGGCTCGCCTCCCACTCGGCGACAGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282120.6
ENST00000398263.6
CDS CAA 72 bp TGGCAAATGCAAGCCCACTACTGGGTCCATCTGACGTaGCCTATCCCTCCTATCCCTCCCATGGACCTGGCT +
Preference number: 6 (lower is better)
Translates to: WQMQAHYWVHLT*PIPPIPPMDLA
Trigger: AGCCAGGTCCATGGGAGGGATAGGAGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS CAA 90 bp GGCGGTGAGCCCTCCTCGGGTCCTGTATCATCATCTTCAGCCTCTTaGGGCTCCACATCCTCAGTAGGCTCTGAAGACTTAACTTCCTCC +
Preference number: 6 (lower is better)
Translates to: GGEPSSGPVSSSSAS*GSTSSVGSEDLTSS
Trigger: GGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGATGTGGAGCCCAAAGAGGCTGAAGATGATGATACAGGACCCGAGGAGGGCTCACCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS TCA 72 bp CTTCATGGCAAATGCAAGCCCACTACTGGGTCCATCTaGCGTTGCCTATCCCTCCTATCCCTCCCATGGACC +
Preference number: 6 (lower is better)
Translates to: LHGKCKPTTGSI*RCLSLLSLPWT
Trigger: GGTCCATGGGAGGGATAGGAGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS GCA 72 bp GAGGACAGCCACAAGAATGGCTGCAGTCACCAGATATaGAAAGAAGTGGCTGCTCTCCGCGCTGCCATTTCC +
Preference number: 6 (lower is better)
Translates to: EDSHKNGCSHQI*KEVAALRAAIS
Trigger: GGAAATGGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCAGCCATTCTTGTGGCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 72 bp CCTTGGGGAGCTCCTTGTTATCAGAAGGGTTGGAGATaGGCTTGGAATGGTCTTTCCGGGAAGGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: PWGAPCYQKGWR*AWNGLSGKAAL
Trigger: CAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 72 bp GCCACTGCTGCTTCATGGCAAATGCAAGCCCACTACTaGGTCCATCTGACGTTGCCTATCCCTCCTATCCCT +
Preference number: 6 (lower is better)
Translates to: ATAASWQMQAHY*VHLTLPIPPIP
Trigger: AGGGATAGGAGGGATAGGCAACGTCAGATGGACCCAGTAGTGGGCTTGCATTTGCCATGAAGCAGCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS CAA 72 bp GGGAGCTCCTTGTTATCAGAAGGGTTGGAGATGGGCTaGGAATGGTCTTTCCGGGAAGGCTGCTCTGGAACC +
Preference number: 6 (lower is better)
Translates to: GSSLLSEGLEMG*EWSFREGCSGT
Trigger: GGTTCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 72 bp GTGTCAGCCTTGGGGAGCTCCTTGTTATCAGAAGGGTaGGAGATGGGCTTGGAATGGTCTTTCCGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: VSALGSSLLSEG*EMGLEWSFREG
Trigger: GCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 90 bp AGCTGGTTTGTGTCAGCCTTGGGGAGCTCCTTGTTATCAGAAGGGTaGGAGATGGGCTTGGAATGGTCTTTCCGGGAAGGCTGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: SWFVSALGSSLLSEG*EMGLEWSFREGCSG
Trigger: TCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACACAAACCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 90 bp CGGTTCTCACTGGAGGCAGAACCGGACATCTTTTCTTTCTCTTCTTaGGGCGGTGAGCCCTCCTCGGGTCCTGTATCATCATCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: RFSLEAEPDIFSFSS*GGEPSSGPVSSSSA
Trigger: GGCTGAAGATGATGATACAGGACCCGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAAAGATGTCCGGTTCTGCCTCCAGTGAGAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 90 bp CTCCCATGGACCTGGCTCCTCCTTCCTTACCTTCTGGTCCAAACGTaGGTAGTCACTGGCCTTTGGCCGCCGGGTGACTTTAGATCTTTT +
Preference number: 6 (lower is better)
Translates to: LPWTWLLLPYLLVQT*VVTGLWPPGDFRSF
Trigger: AAAAGATCTAAAGTCACCCGGCGGCCAAAGGCCAGTGACTACCAACGTTTGGACCAGAAGGTAAGGAAGGAGGAGCCAGGTCCATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444342.2
CDS CCA 72 bp GGAGCTCCTTGTTATCAGAAGGGTTGGAGATGGGCTTaGAATGGTCTTTCCGGGAAGGCTGCTCTGGAACCA +
Preference number: 6 (lower is better)
Translates to: GAPCYQKGWRWA*NGLSGKAALEP
Trigger: TGGTTCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 72 bp TGTCAGCCTTGGGGAGCTCCTTGTTATCAGAAGGGTTaGAGATGGGCTTGGAATGGTCTTTCCGGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: CQPWGAPCYQKG*RWAWNGLSGKA
Trigger: AGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 90 bp TCAGCCTTGGGGAGCTCCTTGTTATCAGAAGGGTTGGAGATGGGCTaGGAATGGTCTTTCCGGGAAGGCTGCTCTGGAACCACCTTGTTA +
Preference number: 6 (lower is better)
Translates to: SALGSSLLSEGLEMG*EWSFREGCSGTTLL
Trigger: TAACAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS TCA 72 bp TTCAGCCTCTTTGGGCTCCACATCCTCAGTAGGCTCTaGAGACTTAACTTCCTCCTGCGGGGGAGAAATGAG +
Preference number: 6 (lower is better)
Translates to: FSLFGLHILSRL*RLNFLLRGRNE
Trigger: CTCATTTCTCCCCCGCAGGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGATGTGGAGCCCAAAGAGGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS GCA 72 bp TTGGAGATGGGCTTGGAATGGTCTTTCCGGGAAGGCTaGTCTGGAACCACCTTGTTAGGGCTGTCTTTTGAG +
Preference number: 6 (lower is better)
Translates to: LEMGLEWSFREG*SGTTLLGLSFE
Trigger: CTCAAAAGACAGCCCTAACAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 72 bp TCCTTGTTATCAGAAGGGTTGGAGATGGGCTTGGAATaGTCTTTCCGGGAAGGCTGCTCTGGAACCACCTTG +
Preference number: 6 (lower is better)
Translates to: SLLSEGLEMGLE*SFREGCSGTTL
Trigger: CAAGGTGGTTCCAGAGCAGCCTTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 72 bp GCTTCCCTTTGTCAGCAAGCTGGTTTGTGTCAGCCTTaGGGAGCTCCTTGTTATCAGAAGGGTTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: ASLCQQAGLCQP*GAPCYQKGWRW
Trigger: CCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CCA 72 bp AACCGTTCGGATAAAGGTCATCCTTCTCGCTACCCGTaGAATCCGAAAGTGTCCCTTCACGGTTCTCACTGG +
Preference number: 6 (lower is better)
Translates to: NRSDKGHPSRYP*NPKVSLHGSHW
Trigger: CCAGTGAGAACCGTGAAGGGACACTTTCGGATTCCACGGGTAGCGAGAAGGATGACCTTTATCCGAACGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000398263.6
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 90 bp TTCCCTTTGTCAGCAAGCTGGTTTGTGTCAGCCTTGGGGAGCTCCTaGTTATCAGAAGGGTTGGAGATGGGCTTGGAATGGTCTTTCCGG +
Preference number: 6 (lower is better)
Translates to: FPLSASWFVSALGSS*LSEGLEMGLEWSFR
Trigger: CCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 72 bp AGCTTCCCTTTGTCAGCAAGCTGGTTTGTGTCAGCCTaGGGGAGCTCCTTGTTATCAGAAGGGTTGGAGATG +
Preference number: 6 (lower is better)
Translates to: SFPLSASWFVSA*GSSLLSEGLEM
Trigger: CATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS CAA 72 bp CATGAGGAGAAAGCTTCCCTTTGTCAGCAAGCTGGTTaGTGTCAGCCTTGGGGAGCTCCTTGTTATCAGAAG +
Preference number: 6 (lower is better)
Translates to: HEEKASLCQQAG*CQPWGAPCYQK
Trigger: CTTCTGATAACAAGGAGCTCCCCAAGGCTGACACAAACCAGCTTGCTGACAAAGGGAAGCTTTCTCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282120.6
ENST00000377386.8
ENST00000409015.5
ENST00000409232.7
ENST00000444342.2
CDS TCA 72 bp TTCAGCCTCTTTGGGCTCCACATCCTCAGTAGGCTCTaGAGACTTAACTTCCTCCTTGTTAGGGCTGTCTTT +
Preference number: 6 (lower is better)
Translates to: FSLFGLHILSRL*RLNFLLVRAVF
Trigger: AAAGACAGCCCTAACAAGGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGATGTGGAGCCCAAAGAGGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398263.6