RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGM5 (Homo sapiens)

Ensembl gene IDs: ENSG00000104055

Ensembl transcript IDs: ENST00000220420.10, ENST00000349114.8, ENST00000396996.3, ENST00000563838.1, ENST00000610827.4, ENST00000611276.4, ENST00000622115.1

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTaGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATGGTCCAGGG +
Preference number: 1 (lower is better)
Translates to: ETGILESLDGTQWNP*ALKRVQGSCANGPG
Trigger: CCCTGGACCATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR TCA 90 bp GGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATCCTCTaGCCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCC +
Preference number: 1 (lower is better)
Translates to: GQGAVKSWPSPTSIL*PLCQITLLDRRLES
Trigger: GGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR CCA 90 bp GTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTaGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGC +
Preference number: 1 (lower is better)
Translates to: VSSDLCAKSRFWIGD*NPGISGWDTVESLG
Trigger: GCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR GCA 90 bp GACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTaGAAATGGTCCAGGGAAATATCCATCCATAGACATTTCCTACCT +
Preference number: 1 (lower is better)
Translates to: DTVESLGPEKSPGEL*KWSREISIHRHFLP
Trigger: AGGTAGGAAATGTCTATGGATGGATATTTCCCTGGACCATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR CCA 90 bp GTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATaGTCCAGGGAAATATCCATCCATAGACATTTCCTACCTGTTCTC +
Preference number: 1 (lower is better)
Translates to: VESLGPEKSPGELCK*SREISIHRHFLPVL
Trigger: GAGAACAGGTAGGAAATGTCTATGGATGGATATTTCCCTGGACCATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR CCA 90 bp CAAGTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTaGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTG +
Preference number: 1 (lower is better)
Translates to: QVLPVSSDLCAKSRF*IGDWNPGISGWDTV
Trigger: CACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTACGTCATCCCCTCTGTaGCTCTTGCTGGAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCTSSPL*LLLEPC
Trigger: ACAGGGCTCCAGCAAGAGCCACAGAGGGGATGACGT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTAAGCCTCTGTTGTGGTaGGGAATGGCGCAGCTTGCA +
Preference number: 2 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCKPLLW*GMAQLA
Trigger: TGCAAGCTGCGCCATTCCCCACCACAACAGAGGCTT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR TCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTACTTGCTGGAGCCCTGTaGAGCCTCTGTTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVLAGAL*SLCCGG
Trigger: CCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAG...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR TCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGACTTGCTGGAGCCCTGTaGAGCCTCTGTTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGLAGAL*SLCCGG
Trigger: CCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAG...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTTGTTGTGGTGGGGAATaGCGCAGCTTGCATTTGAAC +
Preference number: 2 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCCCGGE*RSLHLN
Trigger: GTTCAAATGCAAGCTGCGCCATTCCCCACCACAACA...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACACGTCATCCCCTCTGTaGCTCTTGCTGGAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDTSSPL*LLLEPC
Trigger: ACAGGGCTCCAGCAAGAGCCACAGAGGGGATGACGT...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAAAGCCTCTGTTGTGGTaGGGAATGGCGCAGCTTGCA +
Preference number: 2 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGKPLLW*GMAQLA
Trigger: TGCAAGCTGCGCCATTCCCCACCACAACAGAGGCTT...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAGTGAAGCCTCTGTTGTaGTGGGGAATGGCGCAGCTT +
Preference number: 2 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGVKPLL*WGMAQL
Trigger: AAGCTGCGCCATTCCCCACCACAACAGAGGCTTCAC...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAACGTCATCCCCTCTGTaGCTCTTGCTGGAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: CQITLLDRRLESWNLWMGTSSPL*LLLEPC
Trigger: ACAGGGCTCCAGCAAGAGCCACAGAGGGGATGACGT...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGAAGCCTCTGTTGTGGTaGGGAATGGCGCAGCTTGCA +
Preference number: 2 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWKPLLW*GMAQLA
Trigger: TGCAAGCTGCGCCATTCCCCACCACAACAGAGGCTT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTTCCTACCTGTTCTCTaGATGCTGGAGTCTCCTATT +
Preference number: 2 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPFLPVL*MLESPI
Trigger: AATAGGAGACTCCAGCATCCAGAGAACAGGTAGGAA...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATTTCCTACCTGTTCTCTaGATGCTGGAGTCTCCTATT +
Preference number: 2 (lower is better)
Translates to: GTQWNPWALKRVQGSCANFLPVL*MLESPI
Trigger: AATAGGAGACTCCAGCATCCAGAGAACAGGTAGGAA...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR GCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTACCTGTTCTCTGGATaGTGGAGTCTCCTATTCATT +
Preference number: 2 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPYLFSG*WSLLFI
Trigger: AATGAATAGGAGACTCCAGCATCCAGAGAACAGGTA...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGATGTTGTGGTGGGGAATaGCGCAGCTTGCATTTGAAC +
Preference number: 2 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGCCGGE*RSLHLN
Trigger: GTTCAAATGCAAGCTGCGCCATTCCCCACCACAACA...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR GCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGATACCTGTTCTCTGGATaGTGGAGTCTCCTATTCATT +
Preference number: 2 (lower is better)
Translates to: CQITLLDRRLESWNLWMGYLFSG*WSLLFI
Trigger: AATGAATAGGAGACTCCAGCATCCAGAGAACAGGTA...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR GCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGTACCTGTTCTCTGGATaGTGGAGTCTCCTATTCATT +
Preference number: 2 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWYLFSG*WSLLFI
Trigger: AATGAATAGGAGACTCCAGCATCCAGAGAACAGGTA...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGCCAAATCACGCTTCTaGATAGGAGACTGGAATCCT +
Preference number: 2 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLAKSRF*IGDWNP
Trigger: AGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR TCA 72 bp AATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTaGAAAGAGTCCAGGGGAGCTGTGCAAATGGTCCAG +
Preference number: 3 (lower is better)
Translates to: NLWMGHSGIPGP*KESRGAVQMVQ
Trigger: CTGGACCATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CAA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACCTGTGAAGCCTCTGTaGTGGTGGGGAATGGCGCAG +
Preference number: 3 (lower is better)
Translates to: CQITLLDRRLESWNLWMGPVKPL*WWGMAQ
Trigger: CTGCGCCATTCCCCACCACAACAGAGGCTTCACAGG...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR CCA 72 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTaGAATCTCTGGATGGGACACAGTGGAATCCCTGGG +
Preference number: 3 (lower is better)
Translates to: CQITLLDRRLES*NLWMGHSGIPG
Trigger: CCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CAA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTGGCGCAGCTTGCATTaGAACTTGCTCCTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPWRSLH*NLLLFL
Trigger: CAGGAAAAGGAGCAAGTTCAAATGCAAGCTGCGCCA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR GCA 72 bp GAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTaGAAATGGTCCAGGGAAATATCCATCCATAGACAT +
Preference number: 3 (lower is better)
Translates to: ESLGPEKSPGEL*KWSREISIHRH
Trigger: ATGTCTATGGATGGATATTTCCCTGGACCATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR CCA 72 bp GACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTaGAATCCTGGAATCTCTGGATGGGACACAGTGGAA +
Preference number: 3 (lower is better)
Translates to: DLCAKSRFWIGD*NPGISGWDTVE
Trigger: TTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR CCA 72 bp CCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTaGATAGGAGACTGGAATCCTGGAATCTCTGGATGG +
Preference number: 3 (lower is better)
Translates to: PVSSDLCAKSRF*IGDWNPGISGW
Trigger: CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CAA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAAACAAAGCAAAGTCTTaGCCCTCATGGAGCTTAAAT +
Preference number: 3 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGNKAKS*PSWSLN
Trigger: ATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTT...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGGGGAATGGCGCAGCTaGCATTTGAACTTGCTCCTT +
Preference number: 3 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLGEWRS*HLNLLL
Trigger: AAGGAGCAAGTTCAAATGCAAGCTGCGCCATTCCCC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTTGGCGCAGCTTGCATTaGAACTTGCTCCTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLWRSLH*NLLLFL
Trigger: CAGGAAAAGGAGCAAGTTCAAATGCAAGCTGCGCCA...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
3UTR-3UTR CAA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGAGCTTGCATTTGAACTaGCTCCTTTTCCTGAAGCTT +
Preference number: 3 (lower is better)
Translates to: GSKQSKVFALMELKFLVESLHLN*LLFLKL
Trigger: AAGCTTCAGGAAAAGGAGCAAGTTCAAATGCAAGCT...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCGGGGCTGTGATGGCGTaGCAGGCTGAACACAGCCCG +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACGAVMA*QAEHSP
Trigger: CGGGCTGTGTTCAGCCTGGCACGCCATCACAGCCCC...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGACCCACGGCCGCCGTaGGAGGAGCGCACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCDPRPP*EERTSS
Trigger: TGAGCTTGTGCGCTCCTCCCACGGCGGCCGTGGGTC...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR TCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCCAGGGGCTGGGGCTGTaGTGGCGTGCCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPQGLGL*WRARLN
Trigger: GTTCAGCCTGGCACGCCATCACAGCCCCAGCCCCTG...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR GCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCAGGGGGCTGCCATCGTaGAGCAGAGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACRGLPS*SRDWAL
Trigger: GAGTGCCCAGTCTCTGCTGCACGATGGCAGCCCCCT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCCGGGCTGGCAGCCTGTaGCGTTCCACTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACRAGSL*RSTASG
Trigger: TCCTGAAGCAGTGGAACGCCACAGGCTGCCAGCCCG...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCCTCCGAGGGCTGTCCTaGCTCAGTGATGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACLRGLS*LSDVGL
Trigger: CAGGCCCACATCACTGAGCCAGGACAGCCCTCGGAG...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTCCGTTGCTCATCTCCTaGGGTGTGGCGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCPLLIS*GVASST
Trigger: GGTGCTGGACGCCACACCTCAGGAGATGAGCAACGG...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGTGGCGTCCAGCACCTaGCAGCCTCCATATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCVASST*QPPYAG
Trigger: CCCTGCATATGGAGGCTGGCAGGTGCTGGACGCCAC...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCCGAAGGGAAGGTGTATaGAGGCTCCGAGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACRREGV*RLRGLS
Trigger: GGACAGCCCTCGGAGCCTGCATACACCTTCCCTTCG...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCCCCCAAGGCCAGGTCTaGCAGCGGTCCAGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACPQGQV*QRSSFN
Trigger: GTTGAAACTGGACCGCTGCCAGACCTGGCCTTGGGG...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR TCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTCTTGCTGGAGCCCTGTaGAGCCTCTGTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCLAGAL*SLCCGG
Trigger: CCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAG...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGTGAGGTTGAAGGCCTaGCCCCGGCGAACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPVRLKA*PRRTSR
Trigger: CCTGCTTGTTCGCCGGGGCCAGGCCTTCAACCTCAC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTTCCACTGCTTCAGGATaGCCACGCTGCCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCSTASG*PRCPST
Trigger: AGTGGACGGGCAGCGTGGCCATCCTGAAGCAGTGGA...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATCGGGCTGGCAGCCTGTaGCGTTCCACTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANRAGSL*RSTASG
Trigger: TCCTGAAGCAGTGGAACGCCACAGGCTGCCAGCCCG...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTTCATCTCCTGAGGTGTaGCGTCCAGCACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCSSPEV*RPAPAS
Trigger: GCTGGCAGGTGCTGGACGCCACACCTCAGGAGATGA...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCACGTCATCCCCTCTGTaGCTCTTGCTGGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACTSSPL*LLLEPC
Trigger: ACAGGGCTCCAGCAAGAGCCACAGAGGGGATGACGT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACCAGGGGCTGGGGCTGTaGTGGCGTGCCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDQGLGL*WRARLN
Trigger: GTTCAGCCTGGCACGCCATCACAGCCCCAGCCCCTG...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR TCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATGGAATCCCTGGGCCCTaGAAAGAGTCCAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANGIPGP*KESRGA
Trigger: AGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCC...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGGAATCCCTGGGCCCTaGAAAGAGTCCAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPGIPGP*KESRGA
Trigger: AGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCCTGCCAGCCTCCATATaGAGGGGGCAGATCCTTCCG +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPLPASI*RGQILP
Trigger: CGGAAGGATCTGCCCCCTGCATATGGAGGCTGGCAG...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCCGAAGGGAAGGTGTATaGAGGCTCCGAGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPRREGV*RLRGLS
Trigger: GGACAGCCCTCGGAGCCTGCATACACCTTCCCTTCG...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTTTGTCCAGGCCTGGCTaGAAGCTCCGGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCLSRPG*KLRFLK
Trigger: CTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAA...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCCCCCAAGGCCAGGTCTaGCAGCGGTCCAGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPPQGQV*QRSSFN
Trigger: GTTGAAACTGGACCGCTGCCAGACCTGGCCTTGGGG...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGACCCACGGCCGCCGTaGGAGGAGCGCACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPDPRPP*EERTSS
Trigger: TGAGCTTGTGCGCTCCTCCCACGGCGGCCGTGGGTC...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCAGCACAGTCTGTGGCTaGGTCAGTCTGGAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACSTVCG*VSLEVQ
Trigger: CTGCACTTCCAGACTGACCCAGCCACAGACTGTGCT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCTCCACTCCGCAGGGTTaGCGCCGTCTGTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACSTPQG*RRLCNS
Trigger: AGAATTACACAGACGGCGCCAACCCTGCGGAGTGGA...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATAGCTCTGGAGGTCTGTaGGGGCCACTTCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANSSGGL*GPLLAL
Trigger: AAGGGCTAGAAGTGGCCCTCACAGACCTCCAGAGCT...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTTCATCACTGTGCACATaGCGGCAGCAAAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCSSLCT*RQQRPS
Trigger: GCTGGGTCTTTGCTGCCGTCATGTGCACAGTGATGA...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAGGGGCTGTGATGGCGTaGCAGGCTGAACACAGCCCG +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGGAVMA*QAEHSP
Trigger: CGGGCTGTGTTCAGCCTGGCACGCCATCACAGCCCC...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR GCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTCAGGATGGCCACGCTaGCCGTCCACTCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDSGWPR*PSTPQG
Trigger: ACCCTGCGGAGTGGACGGGCAGCGTGGCCATCCTGA...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTCAGGATGGCCACGCTaGCCGTCCACTCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPSGWPR*PSTPQG
Trigger: ACCCTGCGGAGTGGACGGGCAGCGTGGCCATCCTGA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCCGGCGAACAAGCAGGTaGTCCACAGTGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPRRTSR*STVISS
Trigger: GGAGGAGATCACTGTGGACCACCTGCTTGTTCGCCG...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTTGTCCAGGCCTGGCTaGAAGCTCCGGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPLSRPG*KLRFLK
Trigger: CTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAA...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTAGCACAGTCTGTGGCTaGGTCAGTCTGGAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCSTVCG*VSLEVQ
Trigger: CTGCACTTCCAGACTGACCCAGCCACAGACTGTGCT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAGAGCACAGTCTGTaGCTGGGTCAGTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCAEHSL*LGQSGS
Trigger: ACTTCCAGACTGACCCAGCCACAGACTGTGCTCTGC...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCCCTCTTTGGGAGCCATaGAAGCTTCTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACPLWEP*KLLAFS
Trigger: GCTGAAGGCTAGAAGCTTCCATGGCTCCCAAAGAGG...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTCTGGATGGGACACAGTaGAATCCCTGGGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCLDGTQ*NPWALK
Trigger: TTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAGCAGGTGGTCCACAGTaGTCTCCTCCGTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGAGGPQ*SPPCGA
Trigger: GGCACCACACGGAGGAGATCACTGTGGACCACCTGC...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGACACACACCACTCTGCTaGCGTAGACGGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGHTPLC*RRRGFP
Trigger: GGGGAAGCCCCGTCTACGTCAGCAGAGTGGTGTGTG...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGCGGGTCGAGCAGCTTaGATTTCAGGGAGACTTGCA +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPAGRAA*ISGRLA
Trigger: TGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCGATCAGCTTGTCTGTTaGCAGGTACTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACDQLVC*QVLAVL
Trigger: CAGTACAGCCAGTACCTGTCAACAGACAAGCTGATC...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATGGACGGTCTCCAGAATaGTGCTTGCTTGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANGRSPE*CLLGVG
Trigger: CCCAACACCAAGCAAGCATCATTCTGGAGACCGTCC...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGGGTCAGTCTGGAAGTaGAGGCTCTTGTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPGSVWK*RLLSSS
Trigger: GCTGCTAGACAAGAGCCTGCACTTCCAGACTGACCC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGCCTTCAGAAACACCTaGCTCTCCTGGAGGGATCCT +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPAFRNT*LSWRDP
Trigger: AGGATCCCTCCAGGAGAGGCAGGTGTTTCTGAAGGC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATGTGGGCCTGGAAGGTTaGAACTCTGCTCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANVGLEG*NSAPLW
Trigger: CCAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCAC...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGTGGGCCTGGAAGGTTaGAACTCTGCTCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPVGLEG*NSAPLW
Trigger: CCAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCAC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAGTGAGGTTGAAGGCCTaGCCCCGGCGAACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGVRLKA*PRRTSR
Trigger: CCTGCTTGTTCGCCGGGGCCAGGCCTTCAACCTCAC...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACAGGCAATCCAGGGGCTaGGGCTGTGATGGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDRQSRG*GCDGVP
Trigger: TGGCACGCCATCACAGCCCCAGCCCCTGGATTGCCT...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTAGGCAATCCAGGGGCTaGGGCTGTGATGGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPRQSRG*GCDGVP
Trigger: TGGCACGCCATCACAGCCCCAGCCCCTGGATTGCCT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGCCGTCACAGACCCCTaGAAGGAGTCGATGTGGATT +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPAVTDP*KESMWI
Trigger: AATCCACATCGACTCCTTCCAGGGGTCTGTGACGGC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCATAGTTCCAGGGACATaGGCGGATCCAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACIVPGT*ADPVLA
Trigger: AGCAAGAACTGGATCCGCCCATGTCCCTGGAACTAT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATCATCTCCTGAGGTGTaGCGTCCAGCACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVSSPEV*RPAPAS
Trigger: GCTGGCAGGTGCTGGACGCCACACCTCAGGAGATGA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCAACACCTGCCTCTCCTaGAGGGATCCTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACNTCLS*RDPSSY
Trigger: GTATGAAGAAGGATCCCTCCAGGAGAGGCAGGTGTT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTCTCCGAGGGCTGTCCTaGCTCAGTGATGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPLRGLS*LSDVGL
Trigger: CAGGCCCACATCACTGAGCCAGGACAGCCCTCGGAG...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTTGTATGGAGAGTGGCTaGTTCACAACGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCCMESG*FTTAAP
Trigger: AGGAGCAGCCGTTGTGAACCAGCCACTCTCCATACA...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCTGTTGTGGTGGGGAATaGCGCAGCTTGCATTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACCCGGE*RSLHLN
Trigger: GTTCAAATGCAAGCTGCGCCATTCCCCACCACAACA...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCAAGCCTCTGTTGTGGTaGGGAATGGCGCAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPKPLLW*GMAQLA
Trigger: TGCAAGCTGCGCCATTCCCCACCACAACAGAGGCTT...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCAGGAGACTGGAATCCTaGAATCTCTGGATGGGACAC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACRRLES*NLWMGH
Trigger: GTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCGGGGCAGTTAAGTCATaGCCAAGTCCTACCAGTATC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACGAVKS*PSPTSI
Trigger: GATACTGGTAGGACTTGGCCATGACTTAACTGCCCC...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACACACCACTCTGCTaGCGTAGACGGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGHTPLC*RRRGFP
Trigger: GGGGAAGCCCCGTCTACGTCAGCAGAGTGGTGTGTG...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGCCGTTGCTCATCTCCTaGGGTGTGGCGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWPLLIS*GVASST
Trigger: GGTGCTGGACGCCACACCTCAGGAGATGAGCAACGG...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCCTCCGAGAGGGGGTTTaGAAATATCACCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACLREGV*KYHLYG
Trigger: TCCATACAGGTGATATTTTCAAACCCCCTCTCGGAG...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTCTTGGTGTTGGGGTTTaGGGACTCCAAGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCLGVGV*GLQGRL
Trigger: AAGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAG...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGACTTGCTGGAGCCCTGTaGAGCCTCTGTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGLAGAL*SLCCGG
Trigger: CCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAG...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACCTTGCTGGAGCCCTGTaGAGCCTCTGTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDLAGAL*SLCCGG
Trigger: CCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAG...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACGGAATCCCTGGGCCCTaGAAAGAGTCCAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDGIPGP*KESRGA
Trigger: AGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCC...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATCCTACCAGTATCCTCTaGCCTCTGTGCCAAATCACG +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANPTSIL*PLCQIT
Trigger: CGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGG...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGACTCCGGTTCCTGGGATaGTCCCCACAGAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGLRFLG*SPQNSW
Trigger: CCAGCTGTTCTGTGGGGAGCATCCCAGGAACCGGAG...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS-3UTR GCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTATCTCCTCCGTGTGGTaGCGCACATTATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCISSVW*RTLFLE
Trigger: CTCCAGAAATAATGTGCGGCACCACACGGAGGAGAT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTTTCATGACATACTCCTaGCTCTGGGGTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCFMTYS*LWGSLS
Trigger: GGACAGTGAACCCCAGAGGCAGGAGTATGTCATGAA...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACCCTGTGGCGTTCCACTaGTTCAGGATGGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDPVAFH*FRMATL
Trigger: CAGCGTGGCCATCCTGAAGCAGTGGAACGCCACAGG...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTCCTGTGGCGTTCCACTaGTTCAGGATGGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPPVAFH*FRMATL
Trigger: CAGCGTGGCCATCCTGAAGCAGTGGAACGCCACAGG...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGACTGCCAGCCTCCATATaGAGGGGGCAGATCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGLPASI*RGQILP
Trigger: CGGAAGGATCTGCCCCCTGCATATGGAGGCTGGCAG...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGGAAGGTTGCAACTCTaGTCCTCTTTGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPGRLQL*SSLGAM
Trigger: CATGGCTCCCAAAGAGGAGCAGAGTTGCAACCTTCC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCGCAGGGGTAGGTCTTTaGTTCTTTAGGAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACAGVGL*FFRREC
Trigger: ACACTCTCTCCTAAAGAAGCAAAGACCTACCCCTGC...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCACACAGTCCTCAACCTaGTCCGAGAGGGGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPTQSST*SERGFE
Trigger: TTCAAACCCCCTCTCGGAGCAGGTTGAGGACTGTGT...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGATCCCCACAGAACAGCTaGGCGGTCTGGAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGSPQNS*AVWSFS
Trigger: GCTGAAGCTCCAGACCGCCCAGCTGTTCTGTGGGGA...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACGCTGCCTCCGGTTCCTaGGATGCTCCCCACAGAACA +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDAASGS*DAPHRT
Trigger: TGTTCTGTGGGGAGCATCCCAGGAACCGGAGGCAGC...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACGCCACTTCTAGCCCTTaGGCCATGGTAGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDATSSP*AMVAAS
Trigger: GGAGGCAGCTACCATGGCCCAAGGGCTAGAAGTGGC...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS-3UTR CCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAGTGAGGTTGAAGGCCTaGCCCCGGCGAACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGVRLKA*PRRTSR
Trigger: CCTGCTTGTTCGCCGGGGCCAGGCCTTCAACCTCAC...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATTGTCCAGGCCTGGCTaGAAGCTCCGGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVLSRPG*KLRFLK
Trigger: CTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAGATGTTGTCCAGGCCTaGCTGGAAGCTCCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVDVVQA*LEAPVP
Trigger: AGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATC...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGATCCACTGCTTCAGGATaGCCACGCTGCCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGSTASG*PRCPST
Trigger: AGTGGACGGGCAGCGTGGCCATCCTGAAGCAGTGGA...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCTTTCCATCTGTATCGTaGCCAGAGTCGAAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACFPSVS*PESKLV
Trigger: CACCAACTTCGACTCTGGCCACGATACAGATGGAAA...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGATCATCTCCTGAGGTGTaGCGTCCAGCACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGSSPEV*RPAPAS
Trigger: GCTGGCAGGTGCTGGACGCCACACCTCAGGAGATGA...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCAACTCTGCTCCTCTTTaGGAGCCATGGAAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACNSAPL*EPWKLL
Trigger: TAGAAGCTTCCATGGCTCCCAAAGAGGAGCAGAGTT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTCAGTGATGTGGGCCTaGAAGGTTGCAACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPSVMWA*KVATLL
Trigger: GAGCAGAGTTGCAACCTTCCAGGCCCACATCACTGA...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACTCCGAGGGCTGTCCTaGCTCAGTGATGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGLRGLS*LSDVGL
Trigger: CAGGCCCACATCACTGAGCCAGGACAGCCCTCGGAG...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATTTGAGGTCCTTGAACTaGGAGGACATGTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANLRSLN*EDMLRA
Trigger: GGCCCTCAACATGTCCTCCCAGTTCAAGGACCTCAA...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTATGCTTGCTTGGTGTTaGGGTTTGAGGACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCMLAWC*GLRTPR
Trigger: CCTTGGAGTCCTCAAACCCCAACACCAAGCAAGCAT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCGAATCCTGGAATCTCTaGATGGGACACAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACESWNL*MGHSGI
Trigger: GATTCCACTGTGTCCCATCCAGAGATTCCAGGATTC...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTAGCTCTGGAGGTCTGTaGGGGCCACTTCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPSSGGL*GPLLAL
Trigger: AAGGGCTAGAAGTGGCCCTCACAGACCTCCAGAGCT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATTTTCAACCACGAAGATaGTGTTGTCCAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANFQPRR*CCPGLA
Trigger: AGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAA...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCACTTGTAGTTCTCTGTaGTGTCATCCCGCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPTCSSL*CHPARH
Trigger: GTGACGAGCGGGATGACATCACAGAGAACTACAAGT...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAGCGGGTCGAGCAGCTTaGATTTCAGGGAGACTTGCA +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVAGRAA*ISGRLA
Trigger: TGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGC...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTCTTTCTGCTGTTTCTTaGAGAGGCCACTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCLSAVS*RGHFLP
Trigger: TGGAAGGAAGTGGCCTCTTCAAGAAACAGCAGAAAG...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAGGACGGTCTCCAGAATaGTGCTTGCTTGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVGRSPE*CLLGVG
Trigger: CCCAACACCAAGCAAGCATCATTCTGGAGACCGTCC...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAGCCTTTGTCCACTCTTaGAGGGGACGGTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVAFVHS*RGRSPE
Trigger: TTCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGC...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGATTGGGCCATGGTAGCTaGCTCCGGTTCCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGLGHGS*LRFLGC
Trigger: GCATCCCAGGAACCGGAGGCAGCTACCATGGCCCAA...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS-3UTR GCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGCTGCCAGCCTCCATATaGAGGGGGCAGATCCTTCCG +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWLPASI*RGQILP
Trigger: CGGAAGGATCTGCCCCCTGCATATGGAGGCTGGCAG...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAGGACGAGCCAGGACATaGAGTCAGCATTCACCATCG +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVGRART*SQHSPS
Trigger: CGATGGTGAATGCTGACTGCATGTCCTGGCTCGTCC...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACGAAGGGAAGGTGTATaGAGGCTCCGAGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGRREGV*RLRGLS
Trigger: GGACAGCCCTCGGAGCCTGCATACACCTTCCCTTCG...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATGAACGCTGTGTCCTaGCAGAATGGGGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGMNAVS*QNGDRG
Trigger: CCCCCTGTCCCCATTCTGGCAGGACACAGCGTTCAT...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACATGAACGCTGTGTCCTaGCAGAATGGGGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDMNAVS*QNGDRG
Trigger: CCCCCTGTCCCCATTCTGGCAGGACACAGCGTTCAT...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAGGGGTAGGTCTTTaGTTCTTTAGGAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCAGVGL*FFRREC
Trigger: ACACTCTCTCCTAAAGAAGCAAAGACCTACCCCTGC...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCGGGAATAGGAGATTTTaGAGGGGTAGGTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACGNRRF*RGRSLL
Trigger: AAGCAAAGACCTACCCCTGCAAAATCTCCTATTCCC...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATTTATTTCTGGAGCTCTaGAGGTCTGTGAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANLFLEL*RSVRAT
Trigger: AGTGGCCCTCACAGACCTCCAGAGCTCCAGAAATAA...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGTGATCTCCTCCGTGTaGTGCCGCACATTATTTCTG +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPVISSV*CRTLFL
Trigger: CAGAAATAATGTGCGGCACCACACGGAGGAGATCAC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTCGGCGAACAAGCAGGTaGTCCACAGTGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPRRTSR*STVISS
Trigger: GGAGGAGATCACTGTGGACCACCTGCTTGTTCGCCG...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGACGGCGAACAAGCAGGTaGTCCACAGTGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGRRTSR*STVISS
Trigger: GGAGGAGATCACTGTGGACCACCTGCTTGTTCGCCG...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAGCCGTCACAGACCCCTaGAAGGAGTCGATGTGGATT +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVAVTDP*KESMWI
Trigger: AATCCACATCGACTCCTTCCAGGGGTCTGTGACGGC...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATTCCCGCTCGTCACTCTaGATGCTCTTTGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANSRSSL*MLFVLI
Trigger: TATCAGCACAAAGAGCATCCAGAGTGACGAGCGGGA...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTCCCGCTCGTCACTCTaGATGCTCTTTGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPSRSSL*MLFVLI
Trigger: TATCAGCACAAAGAGCATCCAGAGTGACGAGCGGGA...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATAACACCTGCCTCTCCTaGAGGGATCCTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANNTCLS*RDPSSY
Trigger: GTATGAAGAAGGATCCCTCCAGGAGAGGCAGGTGTT...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATTGTTGTGGTGGGGAATaGCGCAGCTTGCATTTGAAC +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANCCGGE*RSLHLN
Trigger: GTTCAAATGCAAGCTGCGCCATTCCCCACCACAACA...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAACGTCATCCCCTCTGTaGCTCTTGCTGGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGTSSPL*LLLEPC
Trigger: ACAGGGCTCCAGCAAGAGCCACAGAGGGGATGACGT...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGGGGCAGTTAAGTCATaGCCAAGTCCTACCAGTATC +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPGAVKS*PSPTSI
Trigger: GATACTGGTAGGACTTGGCCATGACTTAACTGCCCC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTTATCATCATTGCTGTTaGTCATGGCACACACCACTC +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCYHHCC*SWHTPL
Trigger: GAGTGGTGTGTGCCATGATCAACAGCAATGATGATA...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATCTTTCTGCTGTTTCTTaGAGAGGCCACTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANLSAVS*RGHFLP
Trigger: TGGAAGGAAGTGGCCTCTTCAAGAAACAGCAGAAAG...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTACCTACCAGTATCCTCTaGCCTCTGTGCCAAATCACG +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVPTSIL*PLCQIT
Trigger: CGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGG...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACGGGTCAGTCTGGAAGTaGAGGCTCTTGTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDGSVWK*RLLSSS
Trigger: GCTGCTAGACAAGAGCCTGCACTTCCAGACTGACCC...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTAGCAGTAGACGCCGTTaGTCATCTCCTGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPSSRRR*SSPEVW
Trigger: CCACACCTCAGGAGATGAGCAACGGCGTCTACTGCT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGCCTTCAGAAACACCTaGCTCTCCTGGAGGGATCCT +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPAFRNT*LSWRDP
Trigger: AGGATCCCTCCAGGAGAGGCAGGTGTTTCTGAAGGC...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTAACAGCTGGGCGGTCTaGAGCTTCAGCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPNSWAV*SFSKLV
Trigger: CACCAGTTTGCTGAAGCTCCAGACCGCCCAGCTGTT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACACAAGCTCACCTCTGTaGAGGTGGCCCCATTGGTCT +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDTSSPL*RWPHWS
Trigger: AGACCAATGGGGCCACCTCCACAGAGGTGAGCTTGT...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAGTGGCTGGGTCAGTCTaGAAGTGCAGGCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGVAGSV*KCRLLS
Trigger: AGACAAGAGCCTGCACTTCCAGACTGACCCAGCCAC...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGTGGCTGGGTCAGTCTaGAAGTGCAGGCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPVAGSV*KCRLLS
Trigger: AGACAAGAGCCTGCACTTCCAGACTGACCCAGCCAC...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTAGCACAGTCTGTGGCTaGGTCAGTCTGGAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPSTVCG*VSLEVQ
Trigger: CTGCACTTCCAGACTGACCCAGCCACAGACTGTGCT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTCCACTCCGCAGGGTTaGCGCCGTCTGTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPSTPQG*RRLCNS
Trigger: AGAATTACACAGACGGCGCCAACCCTGCGGAGTGGA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTCCACTCCGCAGGGTTaGCGCCGTCTGTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDSTPQG*RRLCNS
Trigger: AGAATTACACAGACGGCGCCAACCCTGCGGAGTGGA...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCCACTCATTCCAGACATaGAAGTTCCAGATAGTATCC +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACHSFQT*KFQIVS
Trigger: GGATACTATCTGGAACTTCCATGTCTGGAATGAGTG...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATAACTCTGCTCCTCTTTaGGAGCCATGGAAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANNSAPL*EPWKLL
Trigger: TAGAAGCTTCCATGGCTCCCAAAGAGGAGCAGAGTT...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATCGTGCAGCAGAGACTaGGCACTCAGGTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVSCSRD*ALRFTL
Trigger: CAAAGTGAACCTGAGTGCCCAGTCTCTGCTGCACGA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATGTATGGAGAGTGGCTaGTTCACAACGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVCMESG*FTTAAP
Trigger: AGGAGCAGCCGTTGTGAACCAGCCACTCTCCATACA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGACACCTGTATGGAGAGTaGCTGGTTCACAACGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGHLYGE*LVHNGC
Trigger: GCAGCCGTTGTGAACCAGCCACTCTCCATACAGGTG...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACCACCTGTATGGAGAGTaGCTGGTTCACAACGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDHLYGE*LVHNGC
Trigger: GCAGCCGTTGTGAACCAGCCACTCTCCATACAGGTG...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTAGAATGATGCTTGCTTaGTGTTGGGGTTTGAGGACT +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCRMMLA*CWGLRT
Trigger: AGTCCTCAAACCCCAACACCAAGCAAGCATCATTCT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAGTGAAGCCTCTGTTGTaGTGGGGAATGGCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGVKPLL*WGMAQL
Trigger: AAGCTGCGCCATTCCCCACCACAACAGAGGCTTCAC...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGACGTCATCCCCTCTGTaGCTCTTGCTGGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWTSSPL*LLLEPC
Trigger: ACAGGGCTCCAGCAAGAGCCACAGAGGGGATGACGT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGACTGGATGGGACACAGTaGAATCCCTGGGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGLDGTQ*NPWALK
Trigger: TTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATTATCATCATTGCTGTTaGTCATGGCACACACCACTC +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANYHHCC*SWHTPL
Trigger: GAGTGGTGTGTGCCATGATCAACAGCAATGATGATA...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATCACTCCAGTTTCCATTaGGCACCCCATTATCATCAT +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANHSSFH*APHYHH
Trigger: ATGATGATAATGGGGTGCTCAATGGAAACTGGAGTG...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGATCATCACTGTGCACATaGCGGCAGCAAAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGSSLCT*RQQRPS
Trigger: GCTGGGTCTTTGCTGCCGTCATGTGCACAGTGATGA...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGGACGGTCTCCAGAATaGTGCTTGCTTGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWGRSPE*CLLGVG
Trigger: CCCAACACCAAGCAAGCATCATTCTGGAGACCGTCC...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGCCTTTGTCCACTCTTaGAGGGGACGGTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWAFVHS*RGRSPE
Trigger: TTCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGC...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAGCCTTTGTCCACTCTTaGAGGGGACGGTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGAFVHS*RGRSPE
Trigger: TTCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGC...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGAGCAGTAGACGCCGTTaGTCATCTCCTGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWSSRRR*SSPEVW
Trigger: CCACACCTCAGGAGATGAGCAACGGCGTCTACTGCT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGGACGAGCCAGGACATaGAGTCAGCATTCACCATCG +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWGRART*SQHSPS
Trigger: CGATGGTGAATGCTGACTGCATGTCCTGGCTCGTCC...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGAAGGTTGCAACTCTaGTCCTCTTTGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPGRLQL*SSLGAM
Trigger: CATGGCTCCCAAAGAGGAGCAGAGTTGCAACCTTCC...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAGTGGGCCTGGAAGGTTaGAACTCTGCTCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGVGLEG*NSAPLW
Trigger: CCAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCAC...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATCCAAGGAAGACTTTCTaGTGTTTCTTGAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANPRKTF*CFLKRP
Trigger: TGGCCTCTTCAAGAAACAGCAGAAAGTCTTCCTTGG...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCATATTAGCTTGGATCTaGCTTTGTCCACTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LLLEPCEASVVVGNGAACILAWI*LCPLLK
Trigger: CTTCAAGAGTGGACAAAGGCAGATCCAAGCTAATAT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAAACACCTGCCTCTCCTaGAGGGATCCTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVNTCLS*RDPSSY
Trigger: GTATGAAGAAGGATCCCTCCAGGAGAGGCAGGTGTT...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGCCTGGCTCAGTGATGTaGGCCTGGAAGGTTGCAACT +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWPGSVM*AWKVAT
Trigger: AGTTGCAACCTTCCAGGCCCACATCACTGAGCCAGG...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACCTGGCTCAGTGATGTaGGCCTGGAAGGTTGCAACT +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGPGSVM*AWKVAT
Trigger: AGTTGCAACCTTCCAGGCCCACATCACTGAGCCAGG...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTACTTGCACCACATCACTaGGTCGAAGGGAAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVLAPHH*VEGKVY
Trigger: ATACACCTTCCCTTCGACCCAGTGATGTGGTGCAAG...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTACAAAGCATATATCCTaGCCCATGTTGGGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPTKHIS*PMLGGS
Trigger: CGACCCGCCCAACATGGGCCAGGATATATGCTTTGT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACACAAAGCATATATCCTaGCCCATGTTGGGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDTKHIS*PMLGGS
Trigger: CGACCCGCCCAACATGGGCCAGGATATATGCTTTGT...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGATTGAGGTCCTTGAACTaGGAGGACATGTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGLRSLN*EDMLRA
Trigger: GGCCCTCAACATGTCCTCCCAGTTCAAGGACCTCAA...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTCGTGCAGCAGAGACTaGGCACTCAGGTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPSCSRD*ALRFTL
Trigger: CAAAGTGAACCTGAGTGCCCAGTCTCTGCTGCACGA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCAGAATGATGCTTGCTTaGTGTTGGGGTTTGAGGACT +
Preference number: 4 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPRMMLA*CWGLRT
Trigger: AGTCCTCAAACCCCAACACCAAGCAAGCATCATTCT...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATGTTGTGGTGGGGAATaGCGCAGCTTGCATTTGAAC +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVCCGGE*RSLHLN
Trigger: GTTCAAATGCAAGCTGCGCCATTCCCCACCACAACA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAGTGAAGCCTCTGTTGTaGTGGGGAATGGCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGVKPLL*WGMAQL
Trigger: AAGCTGCGCCATTCCCCACCACAACAGAGGCTTCAC...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAAGGAGACTGGAATCCTaGAATCTCTGGATGGGACAC +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVRRLES*NLWMGH
Trigger: GTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATTTCTGGATAGGAGACTaGAATCCTGGAATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANFWIGD*NPGISG
Trigger: TCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAA...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAACTTGTAGTTCTCTGTaGTGTCATCCCGCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGTCSSL*CHPARH
Trigger: GTGACGAGCGGGATGACATCACAGAGAACTACAAGT...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAGATCAGCTTGTCTGTTaGCAGGTACTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGDQLVC*QVLAVL
Trigger: CAGTACAGCCAGTACCTGTCAACAGACAAGCTGATC...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGACTTGGTGTTGGGGTTTaGGGACTCCAAGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGLGVGV*GLQGRL
Trigger: AAGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAG...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACCTACCAGTATCCTCTaGCCTCTGTGCCAAATCACG +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGPTSIL*PLCQIT
Trigger: CGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGG...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTATCTCCTCCGTGTGGTaGCGCACATTATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPISSVW*RTLFLE
Trigger: CTCCAGAAATAATGTGCGGCACCACACGGAGGAGAT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTTCATGACATACTCCTaGCTCTGGGGTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPFMTYS*LWGSLS
Trigger: GGACAGTGAACCCCAGAGGCAGGAGTATGTCATGAA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTCTAGCCTTCAGCTTCTaGAGAGCCTTCAGAAACACC +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPLAFSF*RAFRNT
Trigger: GGTGTTTCTGAAGGCTCTGCAGAAGCTGAAGGCTAG...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAACACAGTCCTCAACCTaGTCCGAGAGGGGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGTQSST*SERGFE
Trigger: TTCAAACCCCCTCTCGGAGCAGGTTGAGGACTGTGT...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTATATTAGCTTGGATCTaGCTTTGTCCACTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCILAWI*LCPLLK
Trigger: CTTCAAGAGTGGACAAAGGCAGATCCAAGCTAATAT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAGTGATCTCCTCCGTGTaGTGCCGCACATTATTTCTG +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGVISSV*CRTLFL
Trigger: CAGAAATAATGTGCGGCACCACACGGAGGAGATCAC...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACGTGATCTCCTCCGTGTaGTGCCGCACATTATTTCTG +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDVISSV*CRTLFL
Trigger: CAGAAATAATGTGCGGCACCACACGGAGGAGATCAC...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGTCAGTGATGTGGGCCTaGAAGGTTGCAACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWSVMWA*KVATLL
Trigger: GAGCAGAGTTGCAACCTTCCAGGCCCACATCACTGA...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGACTTGCACCACATCACTaGGTCGAAGGGAAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGLAPHH*VEGKVY
Trigger: ATACACCTTCCCTTCGACCCAGTGATGTGGTGCAAG...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAACAAAGCATATATCCTaGCCCATGTTGGGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGTKHIS*PMLGGS
Trigger: CGACCCGCCCAACATGGGCCAGGATATATGCTTTGT...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGTCGTGCAGCAGAGACTaGGCACTCAGGTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWSCSRD*ALRFTL
Trigger: CAAAGTGAACCTGAGTGCCCAGTCTCTGCTGCACGA...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTAAAATATCACCTGTATaGAGAGTGGCTGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCKISPV*RVAGSQ
Trigger: TTGTGAACCAGCCACTCTCCATACAGGTGATATTTT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATGCTTGCTTGGTGTTaGGGTTTGAGGACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGMLAWC*GLRTPR
Trigger: CCTTGGAGTCCTCAAACCCCAACACCAAGCAAGCAT...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAGGGGCAGTTAAGTCATaGCCAAGTCCTACCAGTATC +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGGAVKS*PSPTSI
Trigger: GATACTGGTAGGACTTGGCCATGACTTAACTGCCCC...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGATGGCGTGCCAGGCTaGACACAGCCCGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLDGVPG*TQPESP
Trigger: TGGGGACTCGGGCTGTGTTCAGCCTGGCACGCCATC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR TCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGCCGTTGCTCATCTCCTaGGGTGTGGCGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEPLLIS*GVASST
Trigger: GGTGCTGGACGCCACACCTCAGGAGATGAGCAACGG...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACCTCCGAGAGGGGGTTTaGAAATATCACCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDLREGV*KYHLYG
Trigger: TCCATACAGGTGATATTTTCAAACCCCCTCTCGGAG...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGACTCCGAGAGGGGGTTTaGAAATATCACCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGLREGV*KYHLYG
Trigger: TCCATACAGGTGATATTTTCAAACCCCCTCTCGGAG...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGACTTTCTGCTGTTTCTTaGAGAGGCCACTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGLSAVS*RGHFLP
Trigger: TGGAAGGAAGTGGCCTCTTCAAGAAACAGCAGAAAG...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACTTGGTGTTGGGGTTTaGGGACTCCAAGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGLGVGV*GLQGRL
Trigger: AAGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAG...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGGTGGCGTCCAGCACCTaGCAGCCTCCATATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEVASST*QPPYAG
Trigger: CCCTGCATATGGAGGCTGGCAGGTGCTGGACGCCAC...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGCTAGCCTTCAGCTTCTaGAGAGCCTTCAGAAACACC +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWLAFSF*RAFRNT
Trigger: GGTGTTTCTGAAGGCTCTGCAGAAGCTGAAGGCTAG...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGAGGGGGCTGCCATCGTaGAGCAGAGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVERGLPS*SRDWAL
Trigger: GAGTGCCCAGTCTCTGCTGCACGATGGCAGCCCCCT...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGTAGACAGCATCCTCTaGGCACCAGGGATTGAAAAG +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWVDSIL*APGIEK
Trigger: CTTTTCAATCCCTGGTGCCCAGAGGATGCTGTCTAC...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTTTCCATCTGTATCGTaGCCAGAGTCGAAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDFPSVS*PESKLV
Trigger: CACCAACTTCGACTCTGGCCACGATACAGATGGAAA...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGTCCCGCTCGTCACTCTaGATGCTCTTTGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWSRSSL*MLFVLI
Trigger: TATCAGCACAAAGAGCATCCAGAGTGACGAGCGGGA...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAAACTCTGCTCCTCTTTaGGAGCCATGGAAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGNSAPL*EPWKLL
Trigger: TAGAAGCTTCCATGGCTCCCAAAGAGGAGCAGAGTT...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATAAAATATCACCTGTATaGAGAGTGGCTGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: GTQWNPWALKRVQGSCANKISPV*RVAGSQ
Trigger: TTGTGAACCAGCCACTCTCCATACAGGTGATATTTT...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAGAATCCTGGAATCTCTaGATGGGACACAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGESWNL*MGHSGI
Trigger: GATTCCACTGTGTCCCATCCAGAGATTCCAGGATTC...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATTCTGGATAGGAGACTaGAATCCTGGAATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVFWIGD*NPGISG
Trigger: TCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACGCCAAATCACGCTTCTaGATAGGAGACTGGAATCCT +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDAKSRF*IGDWNP
Trigger: AGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGC...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGCAGGTGGTCCACAGTaGTCTCCTCCGTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLAGGPQ*SPPCGA
Trigger: GGCACCACACGGAGGAGATCACTGTGGACCACCTGC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAAGCCATAATCATTCATaGCATACTCCTGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGSHNHS*HTPASG
Trigger: CCCAGAGGCAGGAGTATGTCATGAATGATTATGGCT...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGAGCCATAATCATTCATaGCATACTCCTGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWSHNHS*HTPASG
Trigger: CCCAGAGGCAGGAGTATGTCATGAATGATTATGGCT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTCACACACCACTCTGCTaGCGTAGACGGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLHTPLC*RRRGFP
Trigger: GGGGAAGCCCCGTCTACGTCAGCAGAGTGGTGTGTG...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGATATCATCATTGCTGTTaGTCATGGCACACACCACTC +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGYHHCC*SWHTPL
Trigger: GAGTGGTGTGTGCCATGATCAACAGCAATGATGATA...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGACACTCCAGTTTCCATTaGGCACCCCATTATCATCAT +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGHSSFH*APHYHH
Trigger: ATGATGATAATGGGGTGCTCAATGGAAACTGGAGTG...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAACAACAAAACAACAGTaGGCTGTTCAGCCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVTTKQQ*AVQPVF
Trigger: AAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGT...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGTGGCGTCCAGCACCTaGCAGCCTCCATATGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLVASST*QPPYAG
Trigger: CCCTGCATATGGAGGCTGGCAGGTGCTGGACGCCAC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAAATTTCAGGGAGACTTaGACCACATCACTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGNFRET*TTSLGR
Trigger: TCGACCCAGTGATGTGGTGCAAGTCTCCCTGAAATT...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTCCAAGGAAGACTTTCTaGTGTTTCTTGAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPPRKTF*CFLKRP
Trigger: TGGCCTCTTCAAGAAACAGCAGAAAGTCTTCCTTGG...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATACCTGTTCTCTGGATaGTGGAGTCTCCTATTCATT +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVYLFSG*WSLLFI
Trigger: AATGAATAGGAGACTCCAGCATCCAGAGAACAGGTA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGATGGAAGGAGTCGATGTaGATTTTCAAGAGGTACCGA +
Preference number: 4 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGWKESM*IFKRYR
Trigger: TCGGTACCTCTTGAAAATCCACATCGACTCCTTCCA...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGTCCACTGCTTCAGGATaGCCACGCTGCCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVESTASG*PRCPST
Trigger: AGTGGACGGGCAGCGTGGCCATCCTGAAGCAGTGGA...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTCGGGCTGGCAGCCTGTaGCGTTCCACTGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLRAGSL*RSTASG
Trigger: TCCTGAAGCAGTGGAACGCCACAGGCTGCCAGCCCG...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTACACTCATTCCAGACATaGAAGTTCCAGATAGTATCC +
Preference number: 4 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVHSFQT*KFQIVS
Trigger: GGATACTATCTGGAACTTCCATGTCTGGAATGAGTG...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAAGAATGATGCTTGCTTaGTGTTGGGGTTTGAGGACT +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGRMMLA*CWGLRT
Trigger: AGTCCTCAAACCCCAACACCAAGCAAGCATCATTCT...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTTCCTACCTGTTCTCTaGATGCTGGAGTCTCCTATT +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDFLPVL*MLESPI
Trigger: AATAGGAGACTCCAGCATCCAGAGAACAGGTAGGAA...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAATCCTGGAATCTCTaGATGGGACACAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWESWNL*MGHSGI
Trigger: GATTCCACTGTGTCCCATCCAGAGATTCCAGGATTC...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGCCAAATCACGCTTCTaGATAGGAGACTGGAATCCT +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWAKSRF*IGDWNP
Trigger: AGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGC...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTAAGGAGAGCAAGGTCTaGAGTTTATTCATACTAGGG +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPKESKV*SLFILG
Trigger: CCCTAGTATGAATAAACTTCAGACCTTGCTCTCCTT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS-3UTR GCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTCCTGTGGCGTTCCACTaGTTCAGGATGGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLPVAFH*FRMATL
Trigger: CAGCGTGGCCATCCTGAAGCAGTGGAACGCCACAGG...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGATGAACGCTGTGTCCTaGCAGAATGGGGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEMNAVS*QNGDRG
Trigger: CCCCCTGTCCCCATTCTGGCAGGACACAGCGTTCAT...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGGGAATAGGAGATTTTaGAGGGGTAGGTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWGNRRF*RGRSLL
Trigger: AAGCAAAGACCTACCCCTGCAAAATCTCCTATTCCC...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACCAAGGAAGACTTTCTaGTGTTTCTTGAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGPRKTF*CFLKRP
Trigger: TGGCCTCTTCAAGAAACAGCAGAAAGTCTTCCTTGG...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGGATGTTGTCCAGGCCTaGCTGGAAGCTCCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEDVVQA*LEAPVP
Trigger: AGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATC...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGACACTCATTCCAGACATaGAAGTTCCAGATAGTATCC +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGHSFQT*KFQIVS
Trigger: GGATACTATCTGGAACTTCCATGTCTGGAATGAGTG...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGTTCTGGATAGGAGACTaGAATCCTGGAATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWFWIGD*NPGISG
Trigger: TCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAA...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTCAGGCAGATGTCTATaGTTTTGTCTTCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDSGRCL*FCLQTV
Trigger: GACAGTTTGAAGACAAAATCATAGACATCTGCCTGA...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTCAGGCAGATGTCTATaGTTTTGTCTTCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPSGRCL*FCLQTV
Trigger: GACAGTTTGAAGACAAAATCATAGACATCTGCCTGA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGTCATCACTGTGCACATaGCGGCAGCAAAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVESSLCT*RQQRPS
Trigger: GCTGGGTCTTTGCTGCCGTCATGTGCACAGTGATGA...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGGGGTCAGTCTGGAAGTaGAGGCTCTTGTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEGSVWK*RLLSSS
Trigger: GCTGCTAGACAAGAGCCTGCACTTCCAGACTGACCC...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATATTAGCTTGGATCTaGCTTTGTCCACTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGILAWI*LCPLLK
Trigger: CTTCAAGAGTGGACAAAGGCAGATCCAAGCTAATAT...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGATGTTGTCCAGGCCTaGCTGGAAGCTCCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLDVVQA*LEAPVP
Trigger: AGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGGCAGAGCACAGTCTGTaGCTGGGTCAGTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEAEHSL*LGQSGS
Trigger: ACTTCCAGACTGACCCAGCCACAGACTGTGCTCTGC...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGCTTCTCATATTAGCTTaGATCTGCCTTTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWLLILA*ICLCPL
Trigger: GAGTGGACAAAGGCAGATCCAAGCTAATATGAGAAG...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACTTCTCATATTAGCTTaGATCTGCCTTTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: CQITLLDRRLESWNLWMGLLILA*ICLCPL
Trigger: GAGTGGACAAAGGCAGATCCAAGCTAATATGAGAAG...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGTCAGGCAGATGTCTATaGTTTTGTCTTCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWSGRCL*FCLQTV
Trigger: GACAGTTTGAAGACAAAATCATAGACATCTGCCTGA...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGCGGGTCGAGCAGCTTaGATTTCAGGGAGACTTGCA +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLAGRAA*ISGRLA
Trigger: TGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGATATTCCCCAAAATCCTaGCTGTGTTGTCATAATACT +
Preference number: 4 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGYSPKS*LCCHNT
Trigger: AGTATTATGACAACACAGGCAGGATTTTGGGGAATA...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTATTCCCCAAAATCCTaGCTGTGTTGTCATAATACT +
Preference number: 4 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPYSPKS*LCCHNT
Trigger: AGTATTATGACAACACAGGCAGGATTTTGGGGAATA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGACACAGTCCTCAACCTaGTCCGAGAGGGGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVETQSST*SERGFE
Trigger: TTCAAACCCCCTCTCGGAGCAGGTTGAGGACTGTGT...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTACAAGCTCACCTCTGTaGAGGTGGCCCCATTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLTSSPL*RWPHWS
Trigger: AGACCAATGGGGCCACCTCCACAGAGGTGAGCTTGT...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTCCTGGCTCAGTGATGTaGGCCTGGAAGGTTGCAACT +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLPGSVM*AWKVAT
Trigger: AGTTGCAACCTTCCAGGCCCACATCACTGAGCCAGG...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGTTGAGGTCCTTGAACTaGGAGGACATGTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVELRSLN*EDMLRA
Trigger: GGCCCTCAACATGTCCTCCCAGTTCAAGGACCTCAA...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTCACCTGTATGGAGAGTaGCTGGTTCACAACGGCTGC +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLHLYGE*LVHNGC
Trigger: GCAGCCGTTGTGAACCAGCCACTCTCCATACAGGTG...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGAAAATATCACCTGTATaGAGAGTGGCTGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWKISPV*RVAGSQ
Trigger: TTGTGAACCAGCCACTCTCCATACAGGTGATATTTT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGACTTGTAGTTCTCTGTaGTGTCATCCCGCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVETCSSL*CHPARH
Trigger: GTGACGAGCGGGATGACATCACAGAGAACTACAAGT...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGATCTCCTCCGTGTGGTaGCGCACATTATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEISSVW*RTLFLE
Trigger: CTCCAGAAATAATGTGCGGCACCACACGGAGGAGAT...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGCTAGCCTTCAGCTTCTaGAGAGCCTTCAGAAACACC +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVELAFSF*RAFRNT
Trigger: GGTGTTTCTGAAGGCTCTGCAGAAGCTGAAGGCTAG...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGGTAGACAGCATCCTCTaGGCACCAGGGATTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEVDSIL*APGIEK
Trigger: CTTTTCAATCCCTGGTGCCCAGAGGATGCTGTCTAC...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGATAGTTCCAGGGACATaGGCGGATCCAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEIVPGT*ADPVLA
Trigger: AGCAAGAACTGGATCCGCCCATGTCCCTGGAACTAT...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTCCTCTTTGGGAGCCATaGAAGCTTCTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLPLWEP*KLLAFS
Trigger: GCTGAAGGCTAGAAGCTTCCATGGCTCCCAAAGAGG...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGATCAGCTTGTCTGTTaGCAGGTACTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLDQLVC*QVLAVL
Trigger: CAGTACAGCCAGTACCTGTCAACAGACAAGCTGATC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTTTCATGACATACTCCTaGCTCTGGGGTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLFMTYS*LWGSLS
Trigger: GGACAGTGAACCCCAGAGGCAGGAGTATGTCATGAA...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGGCAGGGGTAGGTCTTTaGTTCTTTAGGAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEAGVGL*FFRREC
Trigger: ACACTCTCTCCTAAAGAAGCAAAGACCTACCCCTGC...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTATAGTTCCAGGGACATaGGCGGATCCAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLIVPGT*ADPVLA
Trigger: AGCAAGAACTGGATCCGCCCATGTCCCTGGAACTAT...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGTTTCCATCTGTATCGTaGCCAGAGTCGAAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEFPSVS*PESKLV
Trigger: CACCAACTTCGACTCTGGCCACGATACAGATGGAAA...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTATGCTTGCTTGGTGTTaGGGTTTGAGGACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLMLAWC*GLRTPR
Trigger: CCTTGGAGTCCTCAAACCCCAACACCAAGCAAGCAT...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTAGGAGACTGGAATCCTaGAATCTCTGGATGGGACAC +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLRRLES*NLWMGH
Trigger: GTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTAATTTCAGGGAGACTTaGACCACATCACTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLNFRET*TTSLGR
Trigger: TCGACCCAGTGATGTGGTGCAAGTCTCCCTGAAATT...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGTGGAAGGAGTCGATGTaGATTTTCAAGAGGTACCGA +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEWKESM*IFKRYR
Trigger: TCGGTACCTCTTGAAAATCCACATCGACTCCTTCCA...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CCA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGTTCCTACCTGTTCTCTaGATGCTGGAGTCTCCTATT +
Preference number: 4 (lower is better)
Translates to: GSKQSKVFALMELKFLVEFLPVL*MLESPI
Trigger: AATAGGAGACTCCAGCATCCAGAGAACAGGTAGGAA...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGGGAATAGGAGATTTTaGAGGGGTAGGTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLGNRRF*RGRSLL
Trigger: AAGCAAAGACCTACCCCTGCAAAATCTCCTATTCCC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR TCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTACAACAAAACAACAGTaGGCTGTTCAGCCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLTTKQQ*AVQPVF
Trigger: AAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGT...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR GCA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTTATTCCCCAAAATCCTaGCTGTGTTGTCATAATACT +
Preference number: 4 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLYSPKS*LCCHNT
Trigger: AGTATTATGACAACACAGGCAGGATTTTGGGGAATA...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS CCA 90 bp ACCGACCCACGGCCGCCGTGGGAGGAGCGCACAAGCTCACCTCTGTaGAGGTGGCCCCATTGGTCTCCAGCCAGGCAATCCAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TDPRPPWEERTSSPL*RWPHWSPARQSRGW
Trigger: CCAGCCCCTGGATTGCCTGGCTGGAGACCAATGGGGCCACCTCCACAGAGGTGAGCTTGTGCGCTCCTCCCACGGCGGCCGTGGGTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS CCA 90 bp AGGGCCACTTCTAGCCCTTGGGCCATGGTAGCTGCCTCCGGTTCCTaGGATGCTCCCCACAGAACAGCTGGGCGGTCTGGAGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: RATSSPWAMVAASGS*DAPHRTAGRSGASA
Trigger: TGCTGAAGCTCCAGACCGCCCAGCTGTTCTGTGGGGAGCATCCCAGGAACCGGAGGCAGCTACCATGGCCCAAGGGCTAGAAGTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS CCA 90 bp GGCTGGAAGCTCCGGTTCCTGAAGTACAGGGTGAGGTTGAAGGCCTaGCCCCGGCGAACAAGCAGGTGGTCCACAGTGATCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GWKLRFLKYRVRLKA*PRRTSRWSTVISSV
Trigger: CACGGAGGAGATCACTGTGGACCACCTGCTTGTTCGCCGGGGCCAGGCCTTCAACCTCACCCTGTACTTCAGGAACCGGAGCTTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp AGGAGTCGATGTGGATTTTCAAGAGGTACCGACCCACGGCCGCCGTaGGAGGAGCGCACAAGCTCACCTCTGTGGAGGTGGCCCCATTGG +
Preference number: 5 (lower is better)
Translates to: RSRCGFSRGTDPRPP*EERTSSPLWRWPHW
Trigger: CCAATGGGGCCACCTCCACAGAGGTGAGCTTGTGCGCTCCTCCCACGGCGGCCGTGGGTCGGTACCTCTTGAAAATCCACATCGACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS-3UTR CAA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCAGCAAAGACCCAGCATaGCCCGTAGCGCACGGGCTG +
Preference number: 5 (lower is better)
Translates to: LLLEPCEASVVVGNGAACSKDPA*PVAHGL
Trigger: CAGCCCGTGCGCTACGGGCAATGCTGGGTCTTTGCT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTAAGTACAGGGTGAGGTaGAAGGCCTGGCCCCGGCGA +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCKYRVR*KAWPRR
Trigger: TCGCCGGGGCCAGGCCTTCAACCTCACCCTGTACTT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS GCA 90 bp CCCCGGCGAACAAGCAGGTGGTCCACAGTGATCTCCTCCGTGTGGTaGCGCACATTATTTCTGGAGCTCTGGAGGTCTGTGAGGGCCACT +
Preference number: 5 (lower is better)
Translates to: PRRTSRWSTVISSVW*RTLFLELWRSVRAT
Trigger: AGTGGCCCTCACAGACCTCCAGAGCTCCAGAAATAATGTGCGGCACCACACGGAGGAGATCACTGTGGACCACCTGCTTGTTCGCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp GGGAAGGTGTATGCAGGCTCCGAGGGCTGTCCTGGCTCAGTGATGTaGGCCTGGAAGGTTGCAACTCTGCTCCTCTTTGGGAGCCATGGA +
Preference number: 5 (lower is better)
Translates to: GKVYAGSEGCPGSVM*AWKVATLLLFGSHG
Trigger: TCCATGGCTCCCAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCACATCACTGAGCCAGGACAGCCCTCGGAGCCTGCATACACCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp TGCCTTTCTTCTGGAGAGCCTCACCGTTGCTCATCTCCTGAGGTGTaGCGTCCAGCACCTGCCAGCCTCCATATGCAGGGGGCAGATCCT +
Preference number: 5 (lower is better)
Translates to: CLSSGEPHRCSSPEV*RPAPASLHMQGADP
Trigger: AGGATCTGCCCCCTGCATATGGAGGCTGGCAGGTGCTGGACGCCACACCTCAGGAGATGAGCAACGGTGAGGCTCTCCAGAAGAAAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTCCTGTGAAGCCTCTGTaGTGGTGGGGAATGGCGCAG +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCPVKPL*WWGMAQ
Trigger: CTGCGCCATTCCCCACCACAACAGAGGCTTCACAGG...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS GCA 90 bp TTCAGGGAGACTTGCACCACATCACTGGGTCGAAGGGAAGGTGTATaGAGGCTCCGAGGGCTGTCCTGGCTCAGTGATGTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: FRETCTTSLGRREGV*RLRGLSWLSDVGLE
Trigger: TTCCAGGCCCACATCACTGAGCCAGGACAGCCCTCGGAGCCTGCATACACCTTCCCTTCGACCCAGTGATGTGGTGCAAGTCTCCCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp TCACTGGGTCGAAGGGAAGGTGTATGCAGGCTCCGAGGGCTGTCCTaGCTCAGTGATGTGGGCCTGGAAGGTTGCAACTCTGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: SLGRREGVCRLRGLS*LSDVGLEGCNSAPL
Trigger: AAGAGGAGCAGAGTTGCAACCTTCCAGGCCCACATCACTGAGCCAGGACAGCCCTCGGAGCCTGCATACACCTTCCCTTCGACCCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp TCCTGCCAGAATGGGGACAGGGGGCTGCCATCGTGCAGCAGAGACTaGGCACTCAGGTTCACTTTGAGGTCCTTGAACTGGGAGGACATG +
Preference number: 5 (lower is better)
Translates to: SCQNGDRGLPSCSRD*ALRFTLRSLNWEDM
Trigger: CATGTCCTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGCCCAGTCTCTGCTGCACGATGGCAGCCCCCTGTCCCCATTCTGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS-3UTR CAA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCACCACGAAGATGATGTaGTCCAGGCCTGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LLLEPCEASVVVGNGAACTTKMM*SRPGWK
Trigger: CTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGGCGGGTCGAGCAGCTaGAATTTCAGGGAGACTTGC +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCGGSSS*NFRETC
Trigger: GCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCC...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATATATCCTGGCCCATGTaGGGCGGGTCGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GTQWNPWALKRVQGSCANISWPM*GGSSSL
Trigger: CAAGCTGCTCGACCCGCCCAACATGGGCCAGGATAT...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCATATCCTGGCCCATGTaGGGCGGGTCGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPISWPM*GGSSSL
Trigger: CAAGCTGCTCGACCCGCCCAACATGGGCCAGGATAT...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCAACTGGGAGGACATGTaGAGGGCCAGCAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: LLLEPCEASVVVGNGAACNWEDM*RASRTK
Trigger: CTTTGTCCTGCTGGCCCTCAACATGTCCTCCCAGTT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATCCTGTGAAGCCTCTGTaGTGGTGGGGAATGGCGCAG +
Preference number: 5 (lower is better)
Translates to: GTQWNPWALKRVQGSCANPVKPL*WWGMAQ
Trigger: CTGCGCCATTCCCCACCACAACAGAGGCTTCACAGG...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS CCA 90 bp AAGTACAGGGTGAGGTTGAAGGCCTGGCCCCGGCGAACAAGCAGGTaGTCCACAGTGATCTCCTCCGTGTGGTGCCGCACATTATTTCTG +
Preference number: 5 (lower is better)
Translates to: KYRVRLKAWPRRTSR*STVISSVWCRTLFL
Trigger: CAGAAATAATGTGCGGCACCACACGGAGGAGATCACTGTGGACCACCTGCTTGTTCGCCGGGGCCAGGCCTTCAACCTCACCCTGTACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS-3UTR CAA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAAGCAAAGACCCAGCATaGCCCGTAGCGCACGGGCTG +
Preference number: 5 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVSKDPA*PVAHGL
Trigger: CAGCCCGTGCGCTACGGGCAATGCTGGGTCTTTGCT...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCGAATTTCAGGGAGACTaGCACCACATCACTGGGTCG +
Preference number: 5 (lower is better)
Translates to: LLLEPCEASVVVGNGAACEFQGD*HHITGS
Trigger: CGACCCAGTGATGTGGTGCAAGTCTCCCTGAAATTC...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCGCTTGGTGTTGGGGTTaGAGGACTCCAAGGAAGACT +
Preference number: 5 (lower is better)
Translates to: LLLEPCEASVVVGNGAACAWCWG*RTPRKT
Trigger: AGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAGC...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS CCA 90 bp ACAGTGATCTCCTCCGTGTGGTGCCGCACATTATTTCTGGAGCTCTaGAGGTCTGTGAGGGCCACTTCTAGCCCTTGGGCCATGGTAGCT +
Preference number: 5 (lower is better)
Translates to: TVISSVWCRTLFLEL*RSVRATSSPWAMVA
Trigger: AGCTACCATGGCCCAAGGGCTAGAAGTGGCCCTCACAGACCTCCAGAGCTCCAGAAATAATGTGCGGCACCACACGGAGGAGATCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000349114.8
CDS CCA 90 bp AGCGGTCCAGTTTCAACCACGAAGATGATGTTGTCCAGGCCTGGCTaGAAGCTCCGGTTCCTGAAGTACAGGGTGAGGTTGAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SGPVSTTKMMLSRPG*KLRFLKYRVRLKAW
Trigger: CCAGGCCTTCAACCTCACCCTGTACTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGGACCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS CCA 90 bp TGGCAGCGGTCCAGTTTCAACCACGAAGATGATGTTGTCCAGGCCTaGCTGGAAGCTCCGGTTCCTGAAGTACAGGGTGAGGTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: WQRSSFNHEDDVVQA*LEAPVPEVQGEVEG
Trigger: GCCTTCAACCTCACCCTGTACTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGGACCGCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS-3UTR CAA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTAAGTACAGGGTGAGGTaGAAGGCCTGGCCCCGGCGA +
Preference number: 5 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPKYRVR*KAWPRR
Trigger: TCGCCGGGGCCAGGCCTTCAACCTCACCCTGTACTT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATTGGAAGTGCAGGCTCTaGTCTAGCAGCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GTQWNPWALKRVQGSCANWKCRL*SSSFRQ
Trigger: CTGCCTGAAGCTGCTAGACAAGAGCCTGCACTTCCA...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTGTGGGCCTGGAAGGTaGCAACTCTGCTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPCGPGR*QLCSSL
Trigger: CAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCACA...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGAATTTCAGGGAGACTaGCACCACATCACTGGGTCG +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCEFQGD*HHITGS
Trigger: CGACCCAGTGATGTGGTGCAAGTCTCCCTGAAATTC...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCTTGGTGTTGGGGTTaGAGGACTCCAAGGAAGACT +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCAWCWG*RTPRKT
Trigger: AGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAGC...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGATGCTTGCTTGGTGTaGGGGTTTGAGGACTCCAAG +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCDACLV*GFEDSK
Trigger: CTTGGAGTCCTCAAACCCCAACACCAAGCAAGCATC...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTGCCTTTGTCCACTCTaGAAGGGGACGGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPCLCPL*KGTVSR
Trigger: TCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGCA...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTAGCTTGGATCTGCCTTaGTCCACTCTTGAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCSLDLP*STLEGD
Trigger: GTCCCCTTCAAGAGTGGACAAAGGCAGATCCAAGCT...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGGGGAATGGCGCAGCTaGCATTTGAACTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCGEWRS*HLNLLL
Trigger: AAGGAGCAAGTTCAAATGCAAGCTGCGCCATTCCCC...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS CCA 90 bp TGGCTCAGTGATGTGGGCCTGGAAGGTTGCAACTCTGCTCCTCTTTaGGAGCCATGGAAGCTTCTAGCCTTCAGCTTCTGCAGAGCCTTC +
Preference number: 5 (lower is better)
Translates to: WLSDVGLEGCNSAPL*EPWKLLAFSFCRAF
Trigger: GAAGGCTCTGCAGAAGCTGAAGGCTAGAAGCTTCCATGGCTCCCAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCACATCACTGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp GCATCCTCAGTTTCAACCACGAAGATGATGTTGTCCAGGCCTGGCTaGAAGCTCCGGTTCCTGAAGTACAGGGTGAGGTTGAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ASSVSTTKMMLSRPG*KLRFLKYRVRLKAW
Trigger: CCAGGCCTTCAACCTCACCCTGTACTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349114.8
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTCTGGGCACCAGGGATaGAAAAGCAGGATGAACTCC +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPSGHQG*KSRMNS
Trigger: GGAGTTCATCCTGCTTTTCAATCCCTGGTGCCCAGA...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000610827.4
CDS-3UTR CAA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCCCAGTTCTTGCTGCCTaGGTAGATGAAGCCATAATC +
Preference number: 5 (lower is better)
Translates to: LLLEPCEASVVVGNGAACPVLAA*VDEAII
Trigger: GATTATGGCTTCATCTACCAAGGCAGCAAGAACTGG...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGAGCAAAGACCCAGCATaGCCCGTAGCGCACGGGCTG +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWSKDPA*PVAHGL
Trigger: CAGCCCGTGCGCTACGGGCAATGCTGGGTCTTTGCT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATGGCCAGAGTCGAAGTaGGTGATCACACGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVWPESK*VITRVG
Trigger: CCCTACCCGTGTGATCACCAACTTCGACTCTGGCCA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGAATTTCAGGGAGACTaGCACCACATCACTGGGTCG +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPEFQGD*HHITGS
Trigger: CGACCCAGTGATGTGGTGCAAGTCTCCCTGAAATTC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGCACTCAGGTTCACTTaGAGGTCCTTGAACTGGGAG +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPALRFT*RSLNWE
Trigger: CTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCACTTTCTGCTGTTTCTaGAAGAGGCCACTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LLLEPCEASVVVGNGAACTFCCF*KRPLPS
Trigger: GGAAGGAAGTGGCCTCTTCAAGAAACAGCAGAAAGT...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTCAGAATGATGCTTGCTaGGTGTTGGGGTTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCQNDAC*VLGFED
Trigger: GTCCTCAAACCCCAACACCAAGCAAGCATCATTCTG...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCAGCTTGGATCTGCCTTaGTCCACTCTTGAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPSLDLP*STLEGD
Trigger: GTCCCCTTCAAGAGTGGACAAAGGCAGATCCAAGCT...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATGGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTTGGCGCAGCTTGCATTaGAACTTGCTCCTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LDGTQWNPWALKRVQGSCWRSLH*NLLLFL
Trigger: CAGGAAAAGGAGCAAGTTCAAATGCAAGCTGCGCCA...ACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS TCA 90 bp GGACAAAGCATATATCCTGGCCCATGTTGGGCGGGTCGAGCAGCTTaGATTTCAGGGAGACTTGCACCACATCACTGGGTCGAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: GQSIYPGPCWAGRAA*ISGRLAPHHWVEGK
Trigger: CTTCCCTTCGACCCAGTGATGTGGTGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCCCAACATGGGCCAGGATATATGCTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp GATGTGGGCCTGGAAGGTTGCAACTCTGCTCCTCTTTGGGAGCCATaGAAGCTTCTAGCCTTCAGCTTCTGCAGAGCCTTCAGAAACACC +
Preference number: 5 (lower is better)
Translates to: DVGLEGCNSAPLWEP*KLLAFSFCRAFRNT
Trigger: GGTGTTTCTGAAGGCTCTGCAGAAGCTGAAGGCTAGAAGCTTCCATGGCTCCCAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp AACTGGGAGGACATGTTGAGGGCCAGCAGGACAAAGCATATATCCTaGCCCATGTTGGGCGGGTCGAGCAGCTTGAATTTCAGGGAGACT +
Preference number: 5 (lower is better)
Translates to: NWEDMLRASRTKHIS*PMLGGSSSLNFRET
Trigger: AGTCTCCCTGAAATTCAAGCTGCTCGACCCGCCCAACATGGGCCAGGATATATGCTTTGTCCTGCTGGCCCTCAACATGTCCTCCCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp GACAGCATCCTCAGTTTCAACCACGAAGATGATGTTGTCCAGGCCTaGCTGGAAGCTCCGGTTCCTGAAGTACAGGGTGAGGTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: DSILSFNHEDDVVQA*LEAPVPEVQGEVEG
Trigger: GCCTTCAACCTCACCCTGTACTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGAGGATGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349114.8
ENST00000611276.4
CDS-3UTR CAA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGCCAGAGTCGAAGTaGGTGATCACACGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDWPESK*VITRVG
Trigger: CCCTACCCGTGTGATCACCAACTTCGACTCTGGCCA...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAGGCGGGTCGAGCAGCTaGAATTTCAGGGAGACTTGC +
Preference number: 5 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGGGSSS*NFRETC
Trigger: GCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCC...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS TCA 90 bp TTCCACAGTCAGCACACAGTCCTCAACCTGCTCCGAGAGGGGGTTTaGAAATATCACCTGTATGGAGAGTGGCTGGTTCACAACGGCTGC +
Preference number: 5 (lower is better)
Translates to: FHSQHTVLNLLREGV*KYHLYGEWLVHNGC
Trigger: GCAGCCGTTGTGAACCAGCCACTCTCCATACAGGTGATATTTTCAAACCCCCTCTCGGAGCAGGTTGAGGACTGTGTGCTGACTGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp TGCAGCAGAGACTGGGCACTCAGGTTCACTTTGAGGTCCTTGAACTaGGAGGACATGTTGAGGGCCAGCAGGACAAAGCATATATCCTGG +
Preference number: 5 (lower is better)
Translates to: CSRDWALRFTLRSLN*EDMLRASRTKHISW
Trigger: CCAGGATATATGCTTTGTCCTGCTGGCCCTCAACATGTCCTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGCCCAGTCTCTGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 90 bp GTGAGCTGTAGATTCCGGACCCGTATATTCCTGGACTTTGGGGCCTaGACCTGGGGAAATCTTCCATTTGCCATCTGCAGGAACATGCTG +
Preference number: 5 (lower is better)
Translates to: VSCRFRTRIFLDFGA*TWGNLPFAICRNML
Trigger: CAGCATGTTCCTGCAGATGGCAAATGGAAGATTTCCCCAGGTCCAGGCCCCAAAGTCCAGGAATATACGGGTCCGGAATCTACAGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS-3UTR CAA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAAGTGCAGGCTCTaGTCTAGCAGCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDWKCRL*SSSFRQ
Trigger: CTGCCTGAAGCTGCTAGACAAGAGCCTGCACTTCCA...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGATGGAAGTGCAGGCTCTaGTCTAGCAGCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGWKCRL*SSSFRQ
Trigger: CTGCCTGAAGCTGCTAGACAAGAGCCTGCACTTCCA...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTGTGGGCCTGGAAGGTaGCAACTCTGCTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPCGPGR*QLCSSL
Trigger: CAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCACA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACAACTGGGAGGACATGTaGAGGGCCAGCAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDNWEDM*RASRTK
Trigger: CTTTGTCCTGCTGGCCCTCAACATGTCCTCCCAGTT...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTAGATGCTTGCTTGGTGTaGGGGTTTGAGGACTCCAAG +
Preference number: 5 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVDACLV*GFEDSK
Trigger: CTTGGAGTCCTCAAACCCCAACACCAAGCAAGCATC...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS TCA 90 bp ACTTCTGGAGCTCATGGGAGAGATTCTAGGCAAAGGTGGGGATGCTaGCTGCTCAGACAAGCACTGCCTGAGCCAGTAAAGTCTAGCAAG +
Preference number: 5 (lower is better)
Translates to: TSGAHGRDSRQRWGC*LLRQALPEPVKSSK
Trigger: CTTGCTAGACTTTACTGGCTCAGGCAGTGCTTGTCTGAGCAGTCAGCATCCCCACCTTTGCCTAGAATCTCTCCCATGAGCTCCAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS GCA 90 bp TTGAAGAGGCCACTTCCTTCCACAGTCAGCACACAGTCCTCAACCTaGTCCGAGAGGGGGTTTGAAAATATCACCTGTATGGAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LKRPLPSTVSTQSST*SERGFENITCMESG
Trigger: GCCACTCTCCATACAGGTGATATTTTCAAACCCCCTCTCGGAGCAGGTTGAGGACTGTGTGCTGACTGTGGAAGGAAGTGGCCTCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGACCACGAAGATGATGTaGTCCAGGCCTGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWTTKMM*SRPGWK
Trigger: CTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATCCACTTCTCCTTCTTaGATGGCTCTGACAGAGGCA +
Preference number: 5 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVSTSPS*MALTEA
Trigger: TGCCTCTGTCAGAGCCATCAAAGAAGGAGAAGTGGA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGATGTGGGCCTGGAAGGTaGCAACTCTGCTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: CQITLLDRRLESWNLWMGCGPGR*QLCSSL
Trigger: CAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCACA...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAGCACTCAGGTTCACTTaGAGGTCCTTGAACTGGGAG +
Preference number: 5 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGALRFT*RSLNWE
Trigger: CTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGC...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTCTTGCTGGAGCCCTGTGAAGCCTCTGTTGTGGTGGGGAATGGCGCAGCTTGCGATAAGGTGATGATCTaGTTCACCAGGATTTTCTCA +
Preference number: 5 (lower is better)
Translates to: LLLEPCEASVVVGNGAACDKVMI*FTRIFS
Trigger: TGAGAAAATCCTGGTGAACAAGATCATCACCTTATC...GCAAGCTGCGCCATTCCCCACCACAACAGAGGCTTCACAGGGCTCCAGCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTACAGAATGATGCTTGCTaGGTGTTGGGGTTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVQNDAC*VLGFED
Trigger: GTCCTCAAACCCCAACACCAAGCAAGCATCATTCTG...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGTGCCTTTGTCCACTCTaGAAGGGGACGGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWCLCPL*KGTVSR
Trigger: TCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGCA...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACAGCTTGGATCTGCCTTaGTCCACTCTTGAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDSLDLP*STLEGD
Trigger: GTCCCCTTCAAGAGTGGACAAAGGCAGATCCAAGCT...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCGCTTCTCATATTAGCTaGGATCTGCCTTTGTCCACT +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPASHIS*DLPLST
Trigger: AGTGGACAAAGGCAGATCCAAGCTAATATGAGAAGC...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGGACACAGTGGAATCCCTGGGCCCTGAAAAGAGTCCAGGGGAGCTGTGCAAATGCTTCTCATATTAGCTaGGATCTGCCTTTGTCCACT +
Preference number: 5 (lower is better)
Translates to: GTQWNPWALKRVQGSCANASHIS*DLPLST
Trigger: AGTGGACAAAGGCAGATCCAAGCTAATATGAGAAGC...ATTTGCACAGCTCCCCTGGACTCTTTTCAGGGCCCAGGGATTCCACTGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAGGGGAATGGCGCAGCTaGCATTTGAACTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGGEWRS*HLNLLL
Trigger: AAGGAGCAAGTTCAAATGCAAGCTGCGCCATTCCCC...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTACCAGTTCTTGCTGCCTaGGTAGATGAAGCCATAATC +
Preference number: 5 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVPVLAA*VDEAII
Trigger: GATTATGGCTTCATCTACCAAGGCAGCAAGAACTGG...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCTTTGTGCTGATAAAATaGCCAACAGAACTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPFVLIK*PTELVS
Trigger: GGACACGAGTTCTGTTGGCAATTTTATCAGCACAAA...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAGCACTCAGGTTCACTTaGAGGTCCTTGAACTGGGAG +
Preference number: 5 (lower is better)
Translates to: CQITLLDRRLESWNLWMGALRFT*RSLNWE
Trigger: CTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGC...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAGGATCAGCTTGTCTGTaGACAGGTACTGGCTGTACT +
Preference number: 5 (lower is better)
Translates to: TLLDRRLESWNLWMGHSGGSACL*TGTGCT
Trigger: AGTACAGCCAGTACCTGTCAACAGACAAGCTGATCC...TCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACGGATCAGCTTGTCTGTaGACAGGTACTGGCTGTACT +
Preference number: 5 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDGSACL*TGTGCT
Trigger: AGTACAGCCAGTACCTGTCAACAGACAAGCTGATCC...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGCTGATGCGGATCAGCTaGTCTGTTGACAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWLMRIS*SVDRYW
Trigger: CCAGTACCTGTCAACAGACAAGCTGATCCGCATCAG...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGCTCCGAGAGGGGGTTaGAAAATATCACCTGTATGG +
Preference number: 5 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPAPRGG*KISPVW
Trigger: CCATACAGGTGATATTTTCAAACCCCCTCTCGGAGC...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACGCTCCGAGAGGGGGTTaGAAAATATCACCTGTATGG +
Preference number: 5 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDAPRGG*KISPVW
Trigger: CCATACAGGTGATATTTTCAAACCCCCTCTCGGAGC...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGATGCTTGCTTGGTGTaGGGGTTTGAGGACTCCAAG +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWDACLV*GFEDSK
Trigger: CTTGGAGTCCTCAAACCCCAACACCAAGCAAGCATC...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS GCA 90 bp GGGCCTGGACCTGGGGAAATCTTCCATTTGCCATCTGCAGGAACATaGTGGAGCTGTCTGGAACACTGGAATAGTGATATTTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: GPGPGEIFHLPSAGT*WSCLEHWNSDISNF
Trigger: GAAGTTGGAAATATCACTATTCCAGTGTTCCAGACAGCTCCAGCATGTTCCTGCAGATGGCAAATGGAAGATTTCCCCAGGTCCAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS GCA 90 bp TATATTCCTGGACTTTGGGGCCTGGACCTGGGGAAATCTTCCATTTaGCATCTGCAGGAACATGCTGGAGCTGTCTGGAACACTGGAATA +
Preference number: 5 (lower is better)
Translates to: YIPGLWGLDLGKSSI*HLQEHAGAVWNTGI
Trigger: TATTCCAGTGTTCCAGACAGCTCCAGCATGTTCCTGCAGATGGCAAATGGAAGATTTCCCCAGGTCCAGGCCCCAAAGTCCAGGAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CCA 90 bp CCACTCTTGAAGGGGACGGTCTCCAGAATGATGCTTGCTTGGTGTTaGGGTTTGAGGACTCCAAGGAAGACTTTCTGCTGTTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PLLKGTVSRMMLAWC*GLRTPRKTFCCFLK
Trigger: CTTCAAGAAACAGCAGAAAGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAGCAAGCATCATTCTGGAGACCGTCCCCTTCAAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS-3UTR CAA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGACCAGTTCTTGCTGCCTaGGTAGATGAAGCCATAATC +
Preference number: 5 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGPVLAA*VDEAII
Trigger: GATTATGGCTTCATCTACCAAGGCAGCAAGAACTGG...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGTCCACTTCTCCTTCTTaGATGGCTCTGACAGAGGCA +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWSTSPS*MALTEA
Trigger: TGCCTCTGTCAGAGCCATCAAAGAAGGAGAAGTGGA...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTTCACTTTGAGGTCCTaGAACTGGGAGGACATGTTG +
Preference number: 5 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPFTLRS*NWEDML
Trigger: CAACATGTCCTCCCAGTTCAAGGACCTCAAAGTGAA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGATTCACTTTGAGGTCCTaGAACTGGGAGGACATGTTG +
Preference number: 5 (lower is better)
Translates to: SSDLCAKSRFWIGDWNPGFTLRS*NWEDML
Trigger: CAACATGTCCTCCCAGTTCAAGGACCTCAAAGTGAA...TCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGGATCAGCTTGTCTGTaGACAGGTACTGGCTGTACT +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWGSACL*TGTGCT
Trigger: AGTACAGCCAGTACCTGTCAACAGACAAGCTGATCC...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTACTTTCTGCTGTTTCTaGAAGAGGCCACTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPTFCCF*KRPLPS
Trigger: GGAAGGAAGTGGCCTCTTCAAGAAACAGCAGAAAGT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS CCA 90 bp TGCTCCGAGAGGGGGTTTGAAAATATCACCTGTATGGAGAGTGGCTaGTTCACAACGGCTGCTCCTAGAACATTAATCGTGATGCTTGGA +
Preference number: 5 (lower is better)
Translates to: CSERGFENITCMESG*FTTAAPRTLIVMLG
Trigger: TCCAAGCATCACGATTAATGTTCTAGGAGCAGCCGTTGTGAACCAGCCACTCTCCATACAGGTGATATTTTCAAACCCCCTCTCGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS-3UTR CAA 90 bp TTCCTGGATATCTGGGGCAGGGGGCAGTTAAGTCATGGCCAAGTCCTACCAGTATTTGTGCTGATAAAATaGCCAACAGAACTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: FLDIWGRGQLSHGQVLPVFVLIK*PTELVS
Trigger: GGACACGAGTTCTGTTGGCAATTTTATCAGCACAAA...TACTGGTAGGACTTGGCCATGACTTAACTGCCCCCTGCCCCAGATATCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGATATCCTGGCCCATGTaGGGCGGGTCGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GSKQSKVFALMELKFLVEISWPM*GGSSSL
Trigger: CAAGCTGCTCGACCCGCCCAACATGGGCCAGGATAT...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGACTTTCTGCTGTTTCTaGAAGAGGCCACTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWTFCCF*KRPLPS
Trigger: GGAAGGAAGTGGCCTCTTCAAGAAACAGCAGAAAGT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp AGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGGGCCCATGTCCTTAAACTTGTaGCTTCTCATATTAGCTTGG +
Preference number: 5 (lower is better)
Translates to: RRLESWNLWMGHSGIPGPMSLNL*LLILAW
Trigger: CCAAGCTAATATGAGAAGCAACAAGTTTAAGGACAT...GGGCCCAGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS CCA 90 bp TTCCATTTGCCATCTGCAGGAACATGCTGGAGCTGTCTGGAACACTaGAATAGTGATATTTCCAACTTCCTTCCCCACTTCTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: FHLPSAGTCWSCLEH*NSDISNFLPHFWSS
Trigger: TGAGCTCCAGAAGTGGGGAAGGAAGTTGGAAATATCACTATTCCAGTGTTCCAGACAGCTCCAGCATGTTCCTGCAGATGGCAAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CCA 90 bp CCTGGACCTGGGGAAATCTTCCATTTGCCATCTGCAGGAACATGCTaGAGCTGTCTGGAACACTGGAATAGTGATATTTCCAACTTCCTT +
Preference number: 5 (lower is better)
Translates to: PGPGEIFHLPSAGTC*SCLEHWNSDISNFL
Trigger: AAGGAAGTTGGAAATATCACTATTCCAGTGTTCCAGACAGCTCCAGCATGTTCCTGCAGATGGCAAATGGAAGATTTCCCCAGGTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGACCCCATTATCATCATaGCTGTTGATCATGGCACAC +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWTPLSS*LLIMAH
Trigger: GTGTGCCATGATCAACAGCAATGATGATAATGGGGT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTTTTGTGCTGATAAAATaGCCAACAGAACTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPFVLIK*PTELVS
Trigger: GGACACGAGTTCTGTTGGCAATTTTATCAGCACAAA...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGGCGGGTCGAGCAGCTaGAATTTCAGGGAGACTTGC +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLGGSSS*NFRETC
Trigger: GCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGGATAGGAGACGATAAGGTGATGATCTaGTTCACCAGGATTTTCTCA +
Preference number: 5 (lower is better)
Translates to: VLPVSSDLCAKSRFWIGDDKVMI*FTRIFS
Trigger: TGAGAAAATCCTGGTGAACAAGATCATCACCTTATC...GTCTCCTATCCAGAAGCGTGATTTGGCACAGAGGTCAGAGGATACTGGTAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTGATAAGGTGATGATCTaGTTCACCAGGATTTTCTCA +
Preference number: 5 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPDKVMI*FTRIFS
Trigger: TGAGAAAATCCTGGTGAACAAGATCATCACCTTATC...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGAGCTTGCATTTGAACTaGCTCCTTTTCCTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWSLHLN*LLFLKL
Trigger: AAGCTTCAGGAAAAGGAGCAAGTTCAAATGCAAGCT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGGCTTGGTGTTGGGGTTaGAGGACTCCAAGGAAGACT +
Preference number: 5 (lower is better)
Translates to: GSKQSKVFALMELKFLVEAWCWG*RTPRKT
Trigger: AGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAGC...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTTGCCTTTGTCCACTCTaGAAGGGGACGGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLCLCPL*KGTVSR
Trigger: TCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGCA...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp CTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGACACAGTGGAATCCCTATGTCCTTAAACTTGTaGCTTCTCATATTAGCTTGG +
Preference number: 5 (lower is better)
Translates to: LDRRLESWNLWMGHSGIPMSLNL*LLILAW
Trigger: CCAAGCTAATATGAGAAGCAACAAGTTTAAGGACAT...AGGGATTCCACTGTGTCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGGGGGAATGGCGCAGCTaGCATTTGAACTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: GSKQSKVFALMELKFLVEGEWRS*HLNLLL
Trigger: AAGGAGCAAGTTCAAATGCAAGCTGCGCCATTCCCC...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGGAAACAAAGCAAAGTCTTaGCCCTCATGGAGCTTAAAT +
Preference number: 5 (lower is better)
Translates to: CQITLLDRRLESWNLWMGNKAKS*PSWSLN
Trigger: ATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTT...TCCCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS TCA 90 bp GGAATGGCGCAGCTTGCATTTGAACTTGCTCCTTTTCCTGAAGCTTaGAATTCACACGTCTGGCGCGTTGTTCCAGAATTTATAATGCAA +
Preference number: 5 (lower is better)
Translates to: GMAQLAFELAPFPEA*NSHVWRVVPEFIMQ
Trigger: TTGCATTATAAATTCTGGAACAACGCGCCAGACGTGTGAATTTCAAGCTTCAGGAAAAGGAGCAAGTTCAAATGCAAGCTGCGCCATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS GCA 90 bp CCCTTAATGTCCTTAAACTTGTTGCTTCTCATATTAGCTTGGATCTaGCTTTGTCCACTCTTGAAGGGGACGGTCTCCAGAATGATGCTT +
Preference number: 5 (lower is better)
Translates to: PLMSLNLLLLILAWI*LCPLLKGTVSRMML
Trigger: AAGCATCATTCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGCAGATCCAAGCTAATATGAGAAGCAACAAGTTTAAGGACATTAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTCTGATGCGGATCAGCTaGTCTGTTGACAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLLMRIS*SVDRYW
Trigger: CCAGTACCTGTCAACAGACAAGCTGATCCGCATCAG...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp TGTGCCAAATCACGCTTCTGGATAGGAGACTGGAATCCTGGAATCTCTGGATGGATGTCCTTAAACTTGTaGCTTCTCATATTAGCTTGG +
Preference number: 5 (lower is better)
Translates to: CAKSRFWIGDWNPGISGWMSLNL*LLILAW
Trigger: CCAAGCTAATATGAGAAGCAACAAGTTTAAGGACAT...CCATCCAGAGATTCCAGGATTCCAGTCTCCTATCCAGAAGCGTGATTTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGTGGCGCAGCTTGCATTaGAACTTGCTCCTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: GSKQSKVFALMELKFLVEWRSLH*NLLLFL
Trigger: CAGGAAAAGGAGCAAGTTCAAATGCAAGCTGCGCCA...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTTCCACTTCTCCTTCTTaGATGGCTCTGACAGAGGCA +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLSTSPS*MALTEA
Trigger: TGCCTCTGTCAGAGCCATCAAAGAAGGAGAAGTGGA...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGTTCACTTTGAGGTCCTaGAACTGGGAGGACATGTTG +
Preference number: 5 (lower is better)
Translates to: GSKQSKVFALMELKFLVEFTLRS*NWEDML
Trigger: CAACATGTCCTCCCAGTTCAAGGACCTCAAAGTGAA...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTCAGAATGATGCTTGCTaGGTGTTGGGGTTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLQNDAC*VLGFED
Trigger: GTCCTCAAACCCCAACACCAAGCAAGCATCATTCTG...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGTCACTCCAGTTTCCATaGAGCACCCCATTATCATCA +
Preference number: 5 (lower is better)
Translates to: GSKQSKVFALMELKFLVESLQFP*STPLSS
Trigger: TGATGATAATGGGGTGCTCAATGGAAACTGGAGTGA...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTACCCCATTATCATCATaGCTGTTGATCATGGCACAC +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLTPLSS*LLIMAH
Trigger: GTGTGCCATGATCAACAGCAATGATGATAATGGGGT...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTTCACTCCAGTTTCCATaGAGCACCCCATTATCATCA +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLSLQFP*STPLSS
Trigger: TGATGATAATGGGGTGCTCAATGGAAACTGGAGTGA...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTGCTTCTCATATTAGCTaGGATCTGCCTTTGTCCACT +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLASHIS*DLPLST
Trigger: AGTGGACAAAGGCAGATCCAAGCTAATATGAGAAGC...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTAGCTTGCATTTGAACTaGCTCCTTTTCCTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLSLHLN*LLFLKL
Trigger: AAGCTTCAGGAAAAGGAGCAAGTTCAAATGCAAGCT...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp GGTAGTAAACAAAGCAAAGTCTTTGCCCTCATGGAGCTTAAATTTCTAGTGGAGAACAAAGCAAAGTCTTaGCCCTCATGGAGCTTAAAT +
Preference number: 5 (lower is better)
Translates to: GSKQSKVFALMELKFLVENKAKS*PSWSLN
Trigger: ATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTT...CTCCACTAGAAATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTTTACTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS-3UTR CAA 90 bp ATTAGCTTTCGCAACAACAAAACAACAGTGAGCTGTTCAGCCTGTCTTTTTCTTAACAAAGCAAAGTCTTaGCCCTCATGGAGCTTAAAT +
Preference number: 5 (lower is better)
Translates to: ISFRNNKTTVSCSACLFLNKAKS*PSWSLN
Trigger: ATTTAAGCTCCATGAGGGCAAAGACTTTGCTTTGTT...AAGAAAAAGACAGGCTGAACAGCTCACTGTTGTTTTGTTGTTGCGAAAGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000611276.4
CDS CCA 72 bp CGGCCGCCGTGGGAGGAGCGCACAAGCTCACCTCTGTaGAGGTGGCCCCATTGGTCTCCAGCCAGGCAATCC +
Preference number: 6 (lower is better)
Translates to: RPPWEERTSSPL*RWPHWSPARQS
Trigger: GGATTGCCTGGCTGGAGACCAATGGGGCCACCTCCACAGAGGTGAGCTTGTGCGCTCCTCCCACGGCGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS GCA 72 bp CCCTTGGGCCATGGTAGCTGCCTCCGGTTCCTGGGATaGTCCCCACAGAACAGCTGGGCGGTCTGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: PLGHGSCLRFLG*SPQNSWAVWSF
Trigger: GAAGCTCCAGACCGCCCAGCTGTTCTGTGGGGAGCATCCCAGGAACCGGAGGCAGCTACCATGGCCCAAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS GCA 72 bp AGCGGGGCCTGCCTTTCTTCTGGAGAGCCTCACCGTTaGTCATCTCCTGAGGTGTGGCGTCCAGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: SGACLSSGEPHR*SSPEVWRPAPA
Trigger: GGCAGGTGCTGGACGCCACACCTCAGGAGATGAGCAACGGTGAGGCTCTCCAGAAGAAAGGCAGGCCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CCA 72 bp TCTAGCCCTTGGGCCATGGTAGCTGCCTCCGGTTCCTaGGATGCTCCCCACAGAACAGCTGGGCGGTCTGGA +
Preference number: 6 (lower is better)
Translates to: SSPWAMVAASGS*DAPHRTAGRSG
Trigger: TCCAGACCGCCCAGCTGTTCTGTGGGGAGCATCCCAGGAACCGGAGGCAGCTACCATGGCCCAAGGGCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS CCA 72 bp GTGAGGTTGAAGGCCTGGCCCCGGCGAACAAGCAGGTaGTCCACAGTGATCTCCTCCGTGTGGTGCCGCACA +
Preference number: 6 (lower is better)
Translates to: VRLKAWPRRTSR*STVISSVWCRT
Trigger: TGTGCGGCACCACACGGAGGAGATCACTGTGGACCACCTGCTTGTTCGCCGGGGCCAGGCCTTCAACCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 72 bp TGCCTCCGGTTCCTGGGATGCTCCCCACAGAACAGCTaGGCGGTCTGGAGCTTCAGCAAACTGGTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: CLRFLGCSPQNS*AVWSFSKLVPE
Trigger: CTCTGGCACCAGTTTGCTGAAGCTCCAGACCGCCCAGCTGTTCTGTGGGGAGCATCCCAGGAACCGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220420.10
CDS CCA 72 bp TGTGGATTTTCAAGAGGTACCGACCCACGGCCGCCGTaGGAGGAGCGCACAAGCTCACCTCTGTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: CGFSRGTDPRPP*EERTSSPLWRW
Trigger: CCACCTCCACAGAGGTGAGCTTGTGCGCTCCTCCCACGGCGGCCGTGGGTCGGTACCTCTTGAAAATCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS TCA 72 bp AGGCCTGGCCCCGGCGAACAAGCAGGTGGTCCACAGTaGTCTCCTCCGTGTGGTGCCGCACATTATTTCTGG +
Preference number: 6 (lower is better)
Translates to: RPGPGEQAGGPQ*SPPCGAAHYFW
Trigger: CCAGAAATAATGTGCGGCACCACACGGAGGAGATCACTGTGGACCACCTGCTTGTTCGCCGGGGCCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 72 bp CTCCGGTTCCTGAAGTACAGGGTGAGGTTGAAGGCCTaGCCCCGGCGAACAAGCAGGTGGTCCACAGTGATC +
Preference number: 6 (lower is better)
Translates to: LRFLKYRVRLKA*PRRTSRWSTVI
Trigger: GATCACTGTGGACCACCTGCTTGTTCGCCGGGGCCAGGCCTTCAACCTCACCCTGTACTTCAGGAACCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS TCA 72 bp CCAGGTCTGGCAGCGGTCCAGTTTCAACCACGAAGATaGTGTTGTCCAGGCCTGGCTGGAAGCTCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: PGLAAVQFQPRR*CCPGLAGSSGS
Trigger: GGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGGACCGCTGCCAGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS TCA 72 bp AGGTGTATGCAGGCTCCGAGGGCTGTCCTGGCTCAGTaGTGTGGGCCTGGAAGGTTGCAACTCTGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: RCMQAPRAVLAQ*CGPGRLQLCSS
Trigger: AGAGGAGCAGAGTTGCAACCTTCCAGGCCCACATCACTGAGCCAGGACAGCCCTCGGAGCCTGCATACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 72 bp TCCTCCGTGTGGTGCCGCACATTATTTCTGGAGCTCTaGAGGTCTGTGAGGGCCACTTCTAGCCCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: SSVWCRTLFLEL*RSVRATSSPWA
Trigger: GGCCCAAGGGCTAGAAGTGGCCCTCACAGACCTCCAGAGCTCCAGAAATAATGTGCGGCACCACACGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220420.10
ENST00000349114.8
CDS CCA 72 bp CGAAGGGAAGGTGTATGCAGGCTCCGAGGGCTGTCCTaGCTCAGTGATGTGGGCCTGGAAGGTTGCAACTCT +
Preference number: 6 (lower is better)
Translates to: RREGVCRLRGLS*LSDVGLEGCNS
Trigger: AGAGTTGCAACCTTCCAGGCCCACATCACTGAGCCAGGACAGCCCTCGGAGCCTGCATACACCTTCCCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp CTGGCCCATGTTGGGCGGGTCGAGCAGCTTGAATTTCAGGGAGACTaGCACCACATCACTGGGTCGAAGGGAAGGTGTATGCAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: LAHVGRVEQLEFQGD*HHITGSKGRCMQAP
Trigger: CGGAGCCTGCATACACCTTCCCTTCGACCCAGTGATGTGGTGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCCCAACATGGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp AGGGGGCTGCCATCGTGCAGCAGAGACTGGGCACTCAGGTTCACTTaGAGGTCCTTGAACTGGGAGGACATGTTGAGGGCCAGCAGGACA +
Preference number: 6 (lower is better)
Translates to: RGLPSCSRDWALRFT*RSLNWEDMLRASRT
Trigger: TGTCCTGCTGGCCCTCAACATGTCCTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGCCCAGTCTCTGCTGCACGATGGCAGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp AAGGCCAGGTCTGGCAGCGGTCCAGTTTCAACCACGAAGATGATGTaGTCCAGGCCTGGCTGGAAGCTCCGGTTCCTGAAGTACAGGGTG +
Preference number: 6 (lower is better)
Translates to: KARSGSGPVSTTKMM*SRPGWKLRFLKYRV
Trigger: CACCCTGTACTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGGACCGCTGCCAGACCTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS GCA 72 bp GCTTCTTTAGGAGAGAGTGTGATGAACGCTGTGTCCTaGCAGAATGGGGACAGGGGGCTGCCATCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: ASLGESVMNAVS*QNGDRGLPSCS
Trigger: GCTGCACGATGGCAGCCCCCTGTCCCCATTCTGGCAGGACACAGCGTTCATCACACTCTCTCCTAAAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 72 bp AATGGGGACAGGGGGCTGCCATCGTGCAGCAGAGACTaGGCACTCAGGTTCACTTTGAGGTCCTTGAACTGG +
Preference number: 6 (lower is better)
Translates to: NGDRGLPSCSRD*ALRFTLRSLNW
Trigger: CCAGTTCAAGGACCTCAAAGTGAACCTGAGTGCCCAGTCTCTGCTGCACGATGGCAGCCCCCTGTCCCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 72 bp TCTGGCAGCGGTCCAGTTTCAACCACGAAGATGATGTaGTCCAGGCCTGGCTGGAAGCTCCGGTTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: SGSGPVSTTKMM*SRPGWKLRFLK
Trigger: CTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGGACCGCTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS CAA 72 bp CCATCGTGCAGCAGAGACTGGGCACTCAGGTTCACTTaGAGGTCCTTGAACTGGGAGGACATGTTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: PSCSRDWALRFT*RSLNWEDMLRA
Trigger: GGCCCTCAACATGTCCTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGCCCAGTCTCTGCTGCACGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS GCA 72 bp ACAAGCAGGTGGTCCACAGTGATCTCCTCCGTGTGGTaGCGCACATTATTTCTGGAGCTCTGGAGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: TSRWSTVISSVW*RTLFLELWRSV
Trigger: CACAGACCTCCAGAGCTCCAGAAATAATGTGCGGCACCACACGGAGGAGATCACTGTGGACCACCTGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS GCA 72 bp GGGGCCTGGACCTGGGGAAATCTTCCATTTGCCATCTaGAGGAACATGCTGGAGCTGTCTGGAACACTGGAA +
Preference number: 6 (lower is better)
Translates to: GAWTWGNLPFAI*RNMLELSGTLE
Trigger: TTCCAGTGTTCCAGACAGCTCCAGCATGTTCCTGCAGATGGCAAATGGAAGATTTCCCCAGGTCCAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CCA 72 bp GATGTGGGCCTGGAAGGTTGCAACTCTGCTCCTCTTTaGGAGCCATGGAAGCTTCTAGCCTTCAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: DVGLEGCNSAPL*EPWKLLAFSFC
Trigger: GCAGAAGCTGAAGGCTAGAAGCTTCCATGGCTCCCAAAGAGGAGCAGAGTTGCAACCTTCCAGGCCCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 72 bp GTTGGGCGGGTCGAGCAGCTTGAATTTCAGGGAGACTaGCACCACATCACTGGGTCGAAGGGAAGGTGTATG +
Preference number: 6 (lower is better)
Translates to: VGRVEQLEFQGD*HHITGSKGRCM
Trigger: CATACACCTTCCCTTCGACCCAGTGATGTGGTGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 72 bp AGGGCCAGCAGGACAAAGCATATATCCTGGCCCATGTaGGGCGGGTCGAGCAGCTTGAATTTCAGGGAGACT +
Preference number: 6 (lower is better)
Translates to: RASRTKHISWPM*GGSSSLNFRET
Trigger: AGTCTCCCTGAAATTCAAGCTGCTCGACCCGCCCAACATGGGCCAGGATATATGCTTTGTCCTGCTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 72 bp AGCAGAGACTGGGCACTCAGGTTCACTTTGAGGTCCTaGAACTGGGAGGACATGTTGAGGGCCAGCAGGACA +
Preference number: 6 (lower is better)
Translates to: SRDWALRFTLRS*NWEDMLRASRT
Trigger: TGTCCTGCTGGCCCTCAACATGTCCTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGCCCAGTCTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp GACATGTTGAGGGCCAGCAGGACAAAGCATATATCCTGGCCCATGTaGGGCGGGTCGAGCAGCTTGAATTTCAGGGAGACTTGCACCACA +
Preference number: 6 (lower is better)
Translates to: DMLRASRTKHISWPM*GGSSSLNFRETCTT
Trigger: TGTGGTGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCCCAACATGGGCCAGGATATATGCTTTGTCCTGCTGGCCCTCAACATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp TGGGCACTCAGGTTCACTTTGAGGTCCTTGAACTGGGAGGACATGTaGAGGGCCAGCAGGACAAAGCATATATCCTGGCCCATGTTGGGC +
Preference number: 6 (lower is better)
Translates to: WALRFTLRSLNWEDM*RASRTKHISWPMLG
Trigger: GCCCAACATGGGCCAGGATATATGCTTTGTCCTGCTGGCCCTCAACATGTCCTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS TCA 72 bp ATATATCCTGGCCCATGTTGGGCGGGTCGAGCAGCTTaGATTTCAGGGAGACTTGCACCACATCACTGGGTC +
Preference number: 6 (lower is better)
Translates to: IYPGPCWAGRAA*ISGRLAPHHWV
Trigger: GACCCAGTGATGTGGTGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCCCAACATGGGCCAGGATATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS TCA 72 bp CCAAGTAGACAGCATCCTCAGTTTCAACCACGAAGATaGTGTTGTCCAGGCCTGGCTGGAAGCTCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: PSRQHPQFQPRR*CCPGLAGSSGS
Trigger: GGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGAGGATGCTGTCTACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349114.8
ENST00000611276.4
CDS TCA 72 bp GCTCATGGGAGAGATTCTAGGCAAAGGTGGGGATGCTaGCTGCTCAGACAAGCACTGCCTGAGCCAGTAAAG +
Preference number: 6 (lower is better)
Translates to: AHGRDSRQRWGC*LLRQALPEPVK
Trigger: CTTTACTGGCTCAGGCAGTGCTTGTCTGAGCAGTCAGCATCCCCACCTTTGCCTAGAATCTCTCCCATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CCA 72 bp GTTTCAACCACGAAGATGATGTTGTCCAGGCCTGGCTaGAAGCTCCGGTTCCTGAAGTACAGGGTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: VSTTKMMLSRPG*KLRFLKYRVRL
Trigger: CAACCTCACCCTGTACTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 72 bp TCCAGTTTCAACCACGAAGATGATGTTGTCCAGGCCTaGCTGGAAGCTCCGGTTCCTGAAGTACAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: SSFNHEDDVVQA*LEAPVPEVQGE
Trigger: CTCACCCTGTACTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220420.10
ENST00000610827.4
ENST00000622115.1
CDS CCA 72 bp CTGGAAGGTTGCAACTCTGCTCCTCTTTGGGAGCCATaGAAGCTTCTAGCCTTCAGCTTCTGCAGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: LEGCNSAPLWEP*KLLAFSFCRAF
Trigger: GAAGGCTCTGCAGAAGCTGAAGGCTAGAAGCTTCCATGGCTCCCAAAGAGGAGCAGAGTTGCAACCTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 72 bp CTCAGTTTCAACCACGAAGATGATGTTGTCCAGGCCTaGCTGGAAGCTCCGGTTCCTGAAGTACAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: LSFNHEDDVVQA*LEAPVPEVQGE
Trigger: CTCACCCTGTACTTCAGGAACCGGAGCTTCCAGCCAGGCCTGGACAACATCATCTTCGTGGTTGAAACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349114.8
ENST00000611276.4
CDS CCA 72 bp AGATTCCGGACCCGTATATTCCTGGACTTTGGGGCCTaGACCTGGGGAAATCTTCCATTTGCCATCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RFRTRIFLDFGA*TWGNLPFAICR
Trigger: CCTGCAGATGGCAAATGGAAGATTTCCCCAGGTCCAGGCCCCAAAGTCCAGGAATATACGGGTCCGGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CAA 72 bp CATATATCCTGGCCCATGTTGGGCGGGTCGAGCAGCTaGAATTTCAGGGAGACTTGCACCACATCACTGGGT +
Preference number: 6 (lower is better)
Translates to: HISWPMLGGSSS*NFRETCTTSLG
Trigger: ACCCAGTGATGTGGTGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCCCAACATGGGCCAGGATATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp AGGACAAAGCATATATCCTGGCCCATGTTGGGCGGGTCGAGCAGCTaGAATTTCAGGGAGACTTGCACCACATCACTGGGTCGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: RTKHISWPMLGGSSS*NFRETCTTSLGRRE
Trigger: TTCCCTTCGACCCAGTGATGTGGTGCAAGTCTCCCTGAAATTCAAGCTGCTCGACCCGCCCAACATGGGCCAGGATATATGCTTTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp CCATCGTGCAGCAGAGACTGGGCACTCAGGTTCACTTTGAGGTCCTaGAACTGGGAGGACATGTTGAGGGCCAGCAGGACAAAGCATATA +
Preference number: 6 (lower is better)
Translates to: PSCSRDWALRFTLRS*NWEDMLRASRTKHI
Trigger: TATATGCTTTGTCCTGCTGGCCCTCAACATGTCCTCCCAGTTCAAGGACCTCAAAGTGAACCTGAGTGCCCAGTCTCTGCTGCACGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp CTTCCACAGTCAGCACACAGTCCTCAACCTGCTCCGAGAGGGGGTTaGAAAATATCACCTGTATGGAGAGTGGCTGGTTCACAACGGCTG +
Preference number: 6 (lower is better)
Translates to: LPQSAHSPQPAPRGG*KISPVWRVAGSQRL
Trigger: CAGCCGTTGTGAACCAGCCACTCTCCATACAGGTGATATTTTCAAACCCCCTCTCGGAGCAGGTTGAGGACTGTGTGCTGACTGTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS TCA 72 bp CAGCACACAGTCCTCAACCTGCTCCGAGAGGGGGTTTaGAAATATCACCTGTATGGAGAGTGGCTGGTTCAC +
Preference number: 6 (lower is better)
Translates to: QHTVLNLLREGV*KYHLYGEWLVH
Trigger: GTGAACCAGCCACTCTCCATACAGGTGATATTTTCAAACCCCCTCTCGGAGCAGGTTGAGGACTGTGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 72 bp GAAGGGGACGGTCTCCAGAATGATGCTTGCTTGGTGTaGGGGTTTGAGGACTCCAAGGAAGACTTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: EGDGLQNDACLV*GFEDSKEDFLL
Trigger: CAGCAGAAAGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAGCAAGCATCATTCTGGAGACCGTCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp GTATATTCCTGGACTTTGGGGCCTGGACCTGGGGAAATCTTCCATTaGCCATCTGCAGGAACATGCTGGAGCTGTCTGGAACACTGGAAT +
Preference number: 6 (lower is better)
Translates to: VYSWTLGPGPGEIFH*PSAGTCWSCLEHWN
Trigger: ATTCCAGTGTTCCAGACAGCTCCAGCATGTTCCTGCAGATGGCAAATGGAAGATTTCCCCAGGTCCAGGCCCCAAAGTCCAGGAATATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CCA 72 bp AAGGGGACGGTCTCCAGAATGATGCTTGCTTGGTGTTaGGGTTTGAGGACTCCAAGGAAGACTTTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: KGTVSRMMLAWC*GLRTPRKTFCC
Trigger: ACAGCAGAAAGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAGCAAGCATCATTCTGGAGACCGTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp CCTTTGTCCACTCTTGAAGGGGACGGTCTCCAGAATGATGCTTGCTaGGTGTTGGGGTTTGAGGACTCCAAGGAAGACTTTCTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: PLSTLEGDGLQNDAC*VLGFEDSKEDFLLF
Trigger: AAACAGCAGAAAGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAGCAAGCATCATTCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS TCA 72 bp CCTGGAGGGATCCTTCTTCATACTTGTAGTTCTCTGTaGTGTCATCCCGCTCGTCACTCTGGATGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: PGGILLHTCSSL*CHPARHSGCSL
Trigger: CAAAGAGCATCCAGAGTGACGAGCGGGATGACATCACAGAGAACTACAAGTATGAAGAAGGATCCCTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 72 bp ACTCTTGAAGGGGACGGTCTCCAGAATGATGCTTGCTaGGTGTTGGGGTTTGAGGACTCCAAGGAAGACTTT +
Preference number: 6 (lower is better)
Translates to: TLEGDGLQNDAC*VLGFEDSKEDF
Trigger: AAAGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAGCAAGCATCATTCTGGAGACCGTCCCCTTCAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 90 bp TCCACTCTTGAAGGGGACGGTCTCCAGAATGATGCTTGCTTGGTGTaGGGGTTTGAGGACTCCAAGGAAGACTTTCTGCTGTTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: STLEGDGLQNDACLV*GFEDSKEDFLLFLE
Trigger: TTCAAGAAACAGCAGAAAGTCTTCCTTGGAGTCCTCAAACCCCAACACCAAGCAAGCATCATTCTGGAGACCGTCCCCTTCAAGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 72 bp CCATCTGCAGGAACATGCTGGAGCTGTCTGGAACACTaGAATAGTGATATTTCCAACTTCCTTCCCCACTTC +
Preference number: 6 (lower is better)
Translates to: PSAGTCWSCLEH*NSDISNFLPHF
Trigger: GAAGTGGGGAAGGAAGTTGGAAATATCACTATTCCAGTGTTCCAGACAGCTCCAGCATGTTCCTGCAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CAA 72 bp TGGAAGTTCCTGTGTCAAACAGAGCCAAGGGAGACGTaGTACTGCTTGGTCTTTCTAGAACAAGGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: WKFLCQTEPRET*YCLVFLEQGKG
Trigger: TCCCTTGCCTTGTTCTAGAAAGACCAAGCAGTACAACGTCTCCCTTGGCTCTGTTTGACACAGGAACTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396996.3
CDS CAA 90 bp AACTTGTTGCTTCTCATATTAGCTTGGATCTGCCTTTGTCCACTCTaGAAGGGGACGGTCTCCAGAATGATGCTTGCTTGGTGTTGGGGT +
Preference number: 6 (lower is better)
Translates to: NLLLLILAWICLCPL*KGTVSRMMLAWCWG
Trigger: ACCCCAACACCAAGCAAGCATCATTCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGCAGATCCAAGCTAATATGAGAAGCAACAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS GCA 72 bp CCTGGGGAAATCTTCCATTTGCCATCTGCAGGAACATaGTGGAGCTGTCTGGAACACTGGAATAGTGATATT +
Preference number: 6 (lower is better)
Translates to: PGEIFHLPSAGT*WSCLEHWNSDI
Trigger: AATATCACTATTCCAGTGTTCCAGACAGCTCCAGCATGTTCCTGCAGATGGCAAATGGAAGATTTCCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CCA 72 bp GATTTTGTCTTCAAACTGTCCATAGTTCCAGGGACATaGGCGGATCCAGTTCTTGCTGCCTTGGTAGATGAA +
Preference number: 6 (lower is better)
Translates to: DFVFKLSIVPGT*ADPVLAALVDE
Trigger: TTCATCTACCAAGGCAGCAAGAACTGGATCCGCCCATGTCCCTGGAACTATGGACAGTTTGAAGACAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CCA 72 bp GGGGAAATCTTCCATTTGCCATCTGCAGGAACATGCTaGAGCTGTCTGGAACACTGGAATAGTGATATTTCC +
Preference number: 6 (lower is better)
Translates to: GEIFHLPSAGTC*SCLEHWNSDIS
Trigger: GGAAATATCACTATTCCAGTGTTCCAGACAGCTCCAGCATGTTCCTGCAGATGGCAAATGGAAGATTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563838.1
CDS CAA 90 bp AATGTCCTTAAACTTGTTGCTTCTCATATTAGCTTGGATCTGCCTTaGTCCACTCTTGAAGGGGACGGTCTCCAGAATGATGCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: NVLKLVASHISLDLP*STLEGDGLQNDACL
Trigger: CAAGCAAGCATCATTCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGCAGATCCAAGCTAATATGAGAAGCAACAAGTTTAAGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1
CDS CAA 72 bp AAACTTGTTGCTTCTCATATTAGCTTGGATCTGCCTTaGTCCACTCTTGAAGGGGACGGTCTCCAGAATGAT +
Preference number: 6 (lower is better)
Translates to: KLVASHISLDLP*STLEGDGLQND
Trigger: ATCATTCTGGAGACCGTCCCCTTCAAGAGTGGACAAAGGCAGATCCAAGCTAATATGAGAAGCAACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220420.10
ENST00000349114.8
ENST00000396996.3
ENST00000610827.4
ENST00000611276.4
ENST00000622115.1