RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGFBRAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135966

Ensembl transcript IDs: ENST00000258449.2, ENST00000393359.7, ENST00000595531.5

Found 678 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCTGGAGGGTGACACAGCCTGTCTGGATGTCCTCGGGAGGGTGTaGCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCC +
Preference number: 1 (lower is better)
Translates to: VLEGDTACLDVLGRV*HPGGDTPIQHTGPS
Trigger: GGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGCACACCCTCCCGAGGACATCCAGACAGGCTGTGTCACCCTCCAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR GCA 90 bp GGAAATGGGCCCATGAGTGAGCGGCGTGGATGGAGAACGTGTTTCTaGAGGAGGGCAAGGCTGACCCCCATGAGGCTCTGTGCCCTCGCC +
Preference number: 1 (lower is better)
Translates to: GNGPMSERRGWRTCF*RRARLTPMRLCALA
Trigger: GGCGAGGGCACAGAGCCTCATGGGGGTCAGCCTTGCCCTCCTGCAGAAACACGTTCTCCATCCACGCCGCTCACTCATGGGCCCATTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CCA 90 bp CACGAGGTAACCCTGGGAAATGGGCCCATGAGTGAGCGGCGTGGATaGAGAACGTGTTTCTGCAGGAGGGCAAGGCTGACCCCCATGAGG +
Preference number: 1 (lower is better)
Translates to: HEVTLGNGPMSERRG*RTCFCRRARLTPMR
Trigger: CCTCATGGGGGTCAGCCTTGCCCTCCTGCAGAAACACGTTCTCCATCCACGCCGCTCACTCATGGGCCCATTTCCCAGGGTTACCTCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CCA 90 bp AAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTaGGACCCCGCAGCCACCTGCCTGTGCTCCGGAAGTGAGAAGCAC +
Preference number: 1 (lower is better)
Translates to: KARAAPVASWASIQS*DPAATCLCSGSEKH
Trigger: GTGCTTCTCACTTCCGGAGCACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR TCA 90 bp CAAAGGCAGAGCCCACGAGGTAACCCTGGGAAATGGGCCCATGAGTaGGCGGCGTGGATGGAGAACGTGTTTCTGCAGGAGGGCAAGGCT +
Preference number: 1 (lower is better)
Translates to: QRQSPRGNPGKWAHE*AAWMENVFLQEGKA
Trigger: AGCCTTGCCCTCCTGCAGAAACACGTTCTCCATCCACGCCGCTCACTCATGGGCCCATTTCCCAGGGTTACCTCGTGGGCTCTGCCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CCA 90 bp GAGTTTCAAATCAGCAGATGCCATGACAGGAAAGGAGCACACAGCTaGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCA +
Preference number: 1 (lower is better)
Translates to: EFQISRCHDRKGAHS*ALARRGFPVSAASS
Trigger: TGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTCCTGTCATGGCATCTGCTGATTTGAAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CCA 90 bp GTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCCTaGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCA +
Preference number: 1 (lower is better)
Translates to: VWTEGSLAPRCLPSS*LTQSMVVICSSCPA
Trigger: TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
3UTR GCA 90 bp TCCATGTACATTCATAGAGCCTGGTCAGCAGCGAGGAGTCCTTGTTaGGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCG +
Preference number: 1 (lower is better)
Translates to: SMYIHRAWSAARSPC*VWTEGSLAPRCLPS
Trigger: CGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTACATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
3UTR GCA 90 bp GCAAGGACAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTaGCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGC +
Preference number: 1 (lower is better)
Translates to: ARTKVSVGEQAKSKG*PSCIMGIHSELGPR
Trigger: GCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTGTCCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CCA 90 bp CCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGCTTCTCTCTTaGAGCGTTCTCAGTTTCTCAACAGATCTTCACTTGCTAGGCAGC +
Preference number: 1 (lower is better)
Translates to: PVSAASSRRGEQLLS*SVLSFSTDLHLLGS
Trigger: GCTGCCTAGCAAGTGAAGATCTGTTGAGAAACTGAGAACGCTCCAAGAGAGAAGCTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR TCA 90 bp CTCGCCACTCACCCAGGCAAGAGAGGACTTTGTCGCCAGCCATGGTaGAGCCACGTTTCCAGTGCAAACATGAGTCTAAAGGTTGGAGTG +
Preference number: 1 (lower is better)
Translates to: LATHPGKRGLCRQPW*SHVSSANMSLKVGV
Trigger: CACTCCAACCTTTAGACTCATGTTTGCACTGGAAACGTGGCTTCACCATGGCTGGCGACAAAGTCCTCTCTTGCCTGGGTGAGTGGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR GCA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTaGTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCT +
Preference number: 1 (lower is better)
Translates to: RCLPSSWLTQSMVVI*SSCPAGSERTRSSP
Trigger: AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
3UTR TCA 90 bp ATTCTACAACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTaGGCTCACACCAATTTACACAGCATACAGTTGTGCTACAAGGAG +
Preference number: 1 (lower is better)
Translates to: ILQQSHPQVKHMTGL*AHTNLHSIQLCYKE
Trigger: CTCCTTGTAGCACAACTGTATGCTGTGTAAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGTTGTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CCA 90 bp TATGACCATTCTACAACAGAGTCACCCACAGGTAAAACACATGACTaGGCTTTGAGCTCACACCAATTTACACAGCATACAGTTGTGCTA +
Preference number: 1 (lower is better)
Translates to: YDHSTTESPTGKTHD*ALSSHQFTQHTVVL
Trigger: TAGCACAACTGTATGCTGTGTAAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGTTGTAGAATGGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR TCA 90 bp GAAAGGAGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTGTCGCCAGCCATGGTaGAGCCACGTTTCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: ERSTQLGPCPPWVSRVRGCRQPW*SHVSSA
Trigger: TGCACTGGAAACGTGGCTTCACCATGGCTGGCGACA...GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CCA 90 bp GGGTGTGCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCTGTCTCCCTTCGTCCTaGCTGACACAGAGCATGGTG +
Preference number: 2 (lower is better)
Translates to: GCAIQEATPPSSTRALPPCLPSS*LTQSMV
Trigger: CACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA...GGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CAA 90 bp CATGAGGCTCTGTGCCCTCGCCACTCACCCAGGCAAGAGAGGACTTaGTCGCCAGCCATGGTGAAGCCACGTTTCCAGTGCAAACATGAG +
Preference number: 2 (lower is better)
Translates to: HEALCPRHSPRQERT*SPAMVKPRFQCKHE
Trigger: CTCATGTTTGCACTGGAAACGTGGCTTCACCATGGCTGGCGACAAAGTCCTCTCTTGCCTGGGTGAGTGGCGAGGGCACAGAGCCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR TCA 90 bp GCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGAATCTTTTGGGAGCTaGGAGCCGGAGAGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: ARAAPVASWASIQSWDPAESFGS*EPERKK
Trigger: TTTCTTCCTCTCCGGCTCTCAGCTCCCAAAAGATTC...TGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR GCA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCAGCATGGTGGTCATCTaGTCTTCATGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLSMVVI*SSCPAG
Trigger: GCCTGCTGGACATGAAGAGCAGATGACCACCATGCT...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR GCA 90 bp GCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTAGCATGGTGGTCATCTaGTCTTCATGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: AARSPCCVWTEGSLAPRCSMVVI*SSCPAG
Trigger: GCCTGCTGGACATGAAGAGCAGATGACCACCATGCT...ACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR GCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCACCCCATGAGGCTCTGTaGCCTCGCCACTCACCCAGG +
Preference number: 2 (lower is better)
Translates to: QRFLWESKQKARAAPVASPHEAL*PRHSPR
Trigger: CCTGGGTGAGTGGCGAGGGCACAGAGCCTCATGGGG...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CAA 90 bp TCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGCTTCTCTCTaGGAGCGTTCTCAGTTTCTCAACAGATCTTCACTTGCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: SRVRGFFKEGRAASL*ERSQFLNRSSLARQ
Trigger: CTGCCTAGCAAGTGAAGATCTGTTGAGAAACTGAGAACGCTCCAAGAGAGAAGCTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCAAAGGAGCACACAGCTaGGCCCTTGCCCGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAKGAHS*ALARRG
Trigger: CCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTT...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR TCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCACCTGTGCTCCGGAAGTaGGAAGCACATGTAAGCACG +
Preference number: 2 (lower is better)
Translates to: QRFLWESKQKARAAPVASPVLRK*EAHVST
Trigger: CGTGCTTACATGTGCTTCTCACTTCCGGAGCACAGG...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR TCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATTGTCGCCAGCCATGGTaGAGCCACGTTTCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHCRQPW*SHVSSA
Trigger: TGCACTGGAAACGTGGCTTCACCATGGCTGGCGACA...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CCA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCAGGATTACTATGTACCTaGACAGGTGAACTCTTGTAT +
Preference number: 2 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPGLLCT*TGELLY
Trigger: ATACAAGAGTTCACCTGTCCAGGTACATAGTAATCC...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCAGGTAAAACACATGACTaGGCTTTGAGCTCACACCAA +
Preference number: 2 (lower is better)
Translates to: QRFLWESKQKARAAPVASGKTHD*ALSSHQ
Trigger: TTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACC...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCACCCCCAAACAACACATaGATGTTTTTGCTTCTTGAC +
Preference number: 2 (lower is better)
Translates to: QRFLWESKQKARAAPVASPPNNT*MFLLLD
Trigger: GTCAAGAAGCAAAAACATCCATGTGTTGTTTGGGGG...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR TCA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCGAATCTTTTGGGAGCTaGGAGCCGGAGAGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPESFGS*EPERKK
Trigger: TTTCTTCCTCTCCGGCTCTCAGCTCCCAAAAGATTC...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR TCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCACTCAGAAATATGATTTaGGAAAAGGGCCTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: QRFLWESKQKARAAPVASLRNMI*EKGLVG
Trigger: TCCTACAAGGCCCTTTTCTCAAATCATATTTCTGAG...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR GCA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGAAGCCACGTTTCCAGTaGAAACATGAGTCTAAAGGT +
Preference number: 2 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPKPRFQ*KHESKG
Trigger: ACCTTTAGACTCATGTTTGCACTGGAAACGTGGCTT...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CAA 90 bp CATTCTACAACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTaGAGCTCACACCAATTTACACAGCATACAGTTGTGCTACAAGGA +
Preference number: 2 (lower is better)
Translates to: HSTTESPTGKTHDWA*SSHQFTQHTVVLQG
Trigger: TCCTTGTAGCACAACTGTATGCTGTGTAAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGTTGTAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CAA 90 bp TGTACATTTTGTGTATCTGGGACCCAATCGGGACAAAGGATAAAGTaGCAAGGACAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: CTFCVSGTQSGQRIK*QGQRFLWESKQKAR
Trigger: CCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTGTCCTTGCAACTTTATCCTTTGTCCCGATTGGGTCCCAGATACACAAAATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR TCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAGGCAGCAGAATCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGGSRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGATTCTGCTGCC...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR GCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATTTTCAAATCAGCAGATaGCATGACAGGAAAGGAGCA +
Preference number: 2 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHFQISR*HDRKGA
Trigger: TGCTCCTTTCCTGTCATGGCATCTGCTGATTTGAAA...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR GCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAAGCATGGTGGTCATCTaGTCTTCATGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGSMVVI*SSCPAG
Trigger: GCCTGCTGGACATGAAGAGCAGATGACCACCATGCT...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTACATTCATAGAGCCTaGTCATTCCATGTACATTCA +
Preference number: 2 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAYIHRA*SFHVHS
Trigger: TGAATGTACATGGAATGACCAGGCTCTATGAATGTA...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CCA 90 bp CTTGTGGTGAAGGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTCCAAGAGTGAGTGCTTaGGTACACAAGGCAGAATCT +
Preference number: 2 (lower is better)
Translates to: LVVKDLVEMENCSTLIPIPRVSA*VHKAES
Trigger: AGATTCTGCCTTGTGTACCCAAGCACTCACTCTTGG...AATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAAGTAGACCTCTGTCTTaGATTACTATGTACCTGGAC +
Preference number: 2 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGSRPLS*ITMYLD
Trigger: GTCCAGGTACATAGTAATCCAAGACAGAGGTCTACT...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CAA 90 bp CTTGATAGGGAACAGCAGATAAACAGTTCCAAAAACCAAATGGTATaGCCCATAGAATATGAATGTAAACTGAGTTCAGTTCATGCTGTT +
Preference number: 2 (lower is better)
Translates to: LDREQQINSSKNQMV*PIEYECKLSSVHAV
Trigger: AACAGCATGAACTGAACTCAGTTTACATTCATATTCTATGGGCAATACCATTTGGTTTTTGGAACTGTTTATCTGCTGTTCCCTATCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CAA 90 bp GACAATTCTTCATACTGTAATAGAATGCTGCTTGTGGTGAAGGATTaGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTA +
Preference number: 2 (lower is better)
Translates to: DNSSYCNRMLLVVKD*VEMENCSTLIPIIL
Trigger: TAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAGCAGCATTCTATTACAGTATGAAGAATTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR GCA 72 bp GGTGACACAGCCTGTCTGGATGTCCTCGGGAGGGTGTaGCATCCAGGAGGCGACACCCCCATCCAGCACACG +
Preference number: 3 (lower is better)
Translates to: GDTACLDVLGRV*HPGGDTPIQHT
Trigger: CGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGCACACCCTCCCGAGGACATCCAGACAGGCTGTGTCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CCA 72 bp ATCAGCAGATGCCATGACAGGAAAGGAGCACACAGCTaGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCG +
Preference number: 3 (lower is better)
Translates to: ISRCHDRKGAHS*ALARRGFPVSA
Trigger: CGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTCCTGTCATGGCATCTGCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CAA 90 bp GCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAAGCGAGGAGTCCTTGTaGCGTATGGACGGAAGGCTC +
Preference number: 3 (lower is better)
Translates to: ARAAPVASWASIQSWDPASEESL*RMDGRL
Trigger: GAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT...TGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR GCA 72 bp CCCATGAGTGAGCGGCGTGGATGGAGAACGTGTTTCTaGAGGAGGGCAAGGCTGACCCCCATGAGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: PMSERRGWRTCF*RRARLTPMRLC
Trigger: ACAGAGCCTCATGGGGGTCAGCCTTGCCCTCCTGCAGAAACACGTTCTCCATCCACGCCGCTCACTCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CCA 72 bp AGAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATaGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCT +
Preference number: 3 (lower is better)
Translates to: RAWSAARSPCCV*TEGSLAPRCLP
Trigger: AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
3UTR CCA 72 bp ACCCTGGGAAATGGGCCCATGAGTGAGCGGCGTGGATaGAGAACGTGTTTCTGCAGGAGGGCAAGGCTGACC +
Preference number: 3 (lower is better)
Translates to: TLGNGPMSERRG*RTCFCRRARLT
Trigger: GGTCAGCCTTGCCCTCCTGCAGAAACACGTTCTCCATCCACGCCGCTCACTCATGGGCCCATTTCCCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR TCA 72 bp AGCCCACGAGGTAACCCTGGGAAATGGGCCCATGAGTaGGCGGCGTGGATGGAGAACGTGTTTCTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: SPRGNPGKWAHE*AAWMENVFLQE
Trigger: CTCCTGCAGAAACACGTTCTCCATCCACGCCGCTCACTCATGGGCCCATTTCCCAGGGTTACCTCGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CAA 90 bp GCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCACTTGTGGTGAAGGATTaGGTAGAGATGGAAAACTGC +
Preference number: 3 (lower is better)
Translates to: ARAAPVASWASIQSWDPALVVKD*VEMENC
Trigger: GCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG...TGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR GCA 72 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTaGTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGG +
Preference number: 3 (lower is better)
Translates to: PSSWLTQSMVVI*SSCPAGSERTR
Trigger: CCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
3UTR TCA 72 bp CACCCAGGCAAGAGAGGACTTTGTCGCCAGCCATGGTaGAGCCACGTTTCCAGTGCAAACATGAGTCTAAAG +
Preference number: 3 (lower is better)
Translates to: HPGKRGLCRQPW*SHVSSANMSLK
Trigger: CTTTAGACTCATGTTTGCACTGGAAACGTGGCTTCACCATGGCTGGCGACAAAGTCCTCTCTTGCCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR GCA 72 bp ACTTTGTCGCCAGCCATGGTGAAGCCACGTTTCCAGTaGAAACATGAGTCTAAAGGTTGGAGTGTGGGGGTG +
Preference number: 3 (lower is better)
Translates to: TLSPAMVKPRFQ*KHESKGWSVGV
Trigger: CACCCCCACACTCCAACCTTTAGACTCATGTTTGCACTGGAAACGTGGCTTCACCATGGCTGGCGACAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR GCA 72 bp AAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTaGCCCAGTTGCATCATGGGCATCCATTCAGAGCTG +
Preference number: 3 (lower is better)
Translates to: KVSVGEQAKSKG*PSCIMGIHSEL
Trigger: CAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CAA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCAGCAGCGAGGAGTCCTaGTTGCGTATGGACGGAAGG +
Preference number: 3 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPSSEES*LRMDGR
Trigger: CCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CAA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTCCCAAGAGTGAGTGCTaGGGTACACAAGGCAGAATC +
Preference number: 3 (lower is better)
Translates to: TESPTGKTHDWALSSHQFPKSEC*GTQGRI
Trigger: GATTCTGCCTTGTGTACCCAAGCACTCACTCTTGGG...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR TCA 72 bp CAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTaGGCTCACACCAATTTACACAGCATACAGTTGTGC +
Preference number: 3 (lower is better)
Translates to: QSHPQVKHMTGL*AHTNLHSIQLC
Trigger: GCACAACTGTATGCTGTGTAAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR-3UTR CAA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAACAAGGCAGAATCTTTaGGGAGCTGAGAGCCGGAGA +
Preference number: 3 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGTRQNL*GAESRR
Trigger: TCTCCGGCTCTCAGCTCCCAAAAGATTCTGCCTTGT...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCGGCCCTTGCCCGCCGTaGGTTTCCCGTGTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVGPCPP*VSRVRG
Trigger: GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCC...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCGGCCCTTGCCCGCCGTaGGTTTCCCGTGTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: STQLGPCPPWVSRVRGFFGPCPP*VSRVRG
Trigger: GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCC...GAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGCGCCGCAGCTTGGCCTaGGTCTCGGTGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LARRGFPVSAASSRRGEQRRSLA*VSVASA
Trigger: TGCAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCG...CTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GAAAGGAGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCGCCAGACACAGGAAGTaGCCGTCCACAGCCACAGCG +
Preference number: 4 (lower is better)
Translates to: ERSTQLGPCPPWVSRVRGARHRK*PSTATA
Trigger: CGCTGTGGCTGTGGACGGCCACTTCCTGTGTCTGGC...GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCGGATGGCGCTCTCCATaGGCAGGCCAGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: STQLGPCPPWVSRVRGFFGWRSP*AGQLPA
Trigger: TGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCC...GAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GAAAGGAGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCCCACGCACTCTATGTTaGCGCGCTCCTTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ERSTQLGPCPPWVSRVRGPRTLC*RAPCRP
Trigger: TGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGG...GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGGCACCAGCAGCCTGTTaGGTGCTGAGGCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: LARRGFPVSAASSRRGEQAPAAC*VLRPHA
Trigger: TGCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGC...CTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCAGGTCTGCGTACTCATaGAGAGGAGGGTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVRSAYS*RGGWDR
Trigger: CCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCT...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCTGGGAAATGGGCCCATaGGTGAGCGGCGTGGATGGA +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVWEMGP*VSGVDG
Trigger: TCCATCCACGCCGCTCACTCATGGGCCCATTTCCCA...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCTCCTCCTGGCATGGATaGTGTCCCTCATGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVSSWHG*CPSWPP
Trigger: TGGGGGCCATGAGGGACAGCATCCATGCCAGGAGGA...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCGCCGCAGCTTGGCCTaGGTCTCGGTGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWRRSLA*VSVASA
Trigger: TGCAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCG...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGTGCAGCGCCTTCTCATaGTCGCCCAGCTTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LARRGFPVSAASSRRGEQCSAFS*SPSFPC
Trigger: GCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCA...CTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCGCGGCACAGTGGGTGTaGACAAGACCACCATTTGGG +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVAAQWV*TRPPFG
Trigger: CCCAAATGGTGGTCTTGTGCACACCCACTGTGCCGC...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAATGGGCCCATGAGTaGGCGGCGTGGATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: STQLGPCPPWVSRVRGFFKWAHE*AAWMEN
Trigger: GTTCTCCATCCACGCCGCTCACTCATGGGCCCATTT...GAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCTCGTGCACCAGGATATaGAGCGCCTTCTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVSCTRI*SAFSCS
Trigger: CGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGA...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGGTAGTCCTCGGCCGCTaGAAAGTCCTGCAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: LARRGFPVSAASSRRGEQVVLGR*KVLQLV
Trigger: CACGAGCTGCAGGACTTTGCAGCGGCCGAGGACTAC...CTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCACCCCATGAGGCTCTGTaGCCTCGCCACTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: ARAAPVASWASIQSWDPAPHEAL*PRHSPR
Trigger: CCTGGGTGAGTGGCGAGGGCACAGAGCCTCATGGGG...TGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGGCAGTGAACGTGGCTaGCCCAGCAGGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPGSERG*PSRHWP
Trigger: AGGCCAGTGCCTGCTGGGCCAGCCACGTTCACTGCC...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGTGGCCTGCGTCTCGGTaGCCTCTGCACCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWWPASR*PLHPCH
Trigger: GTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCA...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCGCCCCAGTTGCATCATaGGCATCCATTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVAPVAS*ASIQSW
Trigger: CCAGCTCTGAATGGATGCCCATGATGCAACTGGGGC...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGGTGTGCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCCGTTCAGGTAGCTCATaGGGAAGCGTTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GCAIQEATPPSSTRALPPRSGSS*GSVCTW
Trigger: CCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACG...GGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGCACACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTGCCACAGCGAGGGGCTaGTCGGCAGTCGACACCTCC +
Preference number: 4 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSATARG*SAVDTS
Trigger: GGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGC...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCGTCGTGGTCAGCCTCTaGATACAGTTTGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVVVVSL*IQFEQG
Trigger: GCCTTGCTCAAACTGTATGCAGAGGCTGACCACGAC...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGTGCAGCGCCTTCTCATaGTCGCCCAGCTTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWCSAFS*SPSFPC
Trigger: GCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCA...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GGGTGTGCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCCACCTGGGTCTGGACTaGATGAGGAAGACTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GCAIQEATPPSSTRALPPHLGLD*MRKTPF
Trigger: AAAGGGAGTCTTCCTCATGCAGTCCAGACCCAGGTG...GGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGCACACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGACCCCGCAGCCACCTaGCTGTGCTCCGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDDPAAT*LCSGSE
Trigger: CTCACTTCCGGAGCACAGGCAGGTGGCTGCGGGGTC...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGGAGCGCTATGACGTATaGAAAGGACACAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LARRGFPVSAASSRRGEQERYDV*KGHSRP
Trigger: GGGGCGGCTGTGTCCTTTCCATACGTCATAGCGCTC...CTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGCCACCTGCCTGTGCTTCCCGTGCAGGATaGCGCTCTCCATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QLHHGHPFRAGTPQPPACASRAG*RSPWAG
Trigger: GCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGC...ACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCTTGCTGGCGGTGGGGTaGGTCTCGGCCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWALLAVG*VSALGA
Trigger: TGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAA...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCCAGGACTGGATGAGCTaGGGTTTGTGTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: STQLGPCPPWVSRVRGFFQDWMS*GLCVCW
Trigger: CCAGCAGACACACAAACCCCAGCTCATCCAGTCCTG...GAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGCTGTTTGGTGGCAGTaGACGTGGCTGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDAVWWQ*TWLAQQ
Trigger: CTGCTGGGCCAGCCACGTTCACTGCCACCAAACAGC...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTGCACCAGCAGCCTGTTaGGTGCTGAGGCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: RSPCCVWTEGSLAPRCLPAPAAC*VLRPHA
Trigger: TGCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGC...AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAAGGTCTGCGTACTCATaGAGAGGAGGGTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPRSAYS*RGGWDR
Trigger: CCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCT...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCCCTCTGCATACAGTTTaGGCAAGGCTGTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVPLHTV*ARLCRC
Trigger: ACATCGACACAGCCTTGCTCAAACTGTATGCAGAGG...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGGTGTGCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCATGTTCACCCACAACTaGACTGCAGCAGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: GCAIQEATPPSSTRALPPMFTHN*TAAASW
Trigger: CCAAGATGCTGCTGCAGTTCAGTTGTGGGTGAACAT...GGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGCACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGGTGTGCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCCCAAAGGTCTCTTGGTaGAAACCTGAACTCCGACCT +
Preference number: 4 (lower is better)
Translates to: GCAIQEATPPSSTRALPPPKVSW*KPELRP
Trigger: AGGTCGGAGTTCAGGTTTTCACCAAGAGACCTTTGG...GGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGCACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAAGGGTCAGCCGTTTCTaGGGGCAAAGGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPRVSRF*GQRQSP
Trigger: TGGGCTCTGCCTTTGCCCTCAGAAACGGCTGACCCT...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCCACGTAGAGGTCCCTaGCGCAGCACTCCACGCACT +
Preference number: 4 (lower is better)
Translates to: AARSPCCVWTEGSLAPRCPRRGP*RSTPRT
Trigger: AGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGG...ACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATCCACGTAGAGGTCCCTaGCGCAGCACTCCACGCACT +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDPRRGP*RSTPRT
Trigger: AGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGG...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCACATTCTCCGACCAGTaGACGGGGGCGCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSTFSDQ*TGARWD
Trigger: ATCCCAGCGCGCCCCCGTGCACTGGTCGGAGAATGT...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCCAGCTGGTTCAGGTCTaGGTACTCATGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: STQLGPCPPWVSRVRGFFQLVQV*VLMKRR
Trigger: CCTCCTCTTCATGAGTACGCAGACCTGAACCAGCTG...GAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTCTGGCGGAGGCCCTCTaGAGCAGCACCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLLAEAL*SSTSSR
Trigger: CCTGGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAG...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCCTGGCGGAGGCCCTCTaGAGCAGCACCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVLAEAL*SSTSSR
Trigger: CCTGGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAG...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCTGGCCTCTGCACCCTTaGCACTGGCGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWAWPLHP*HWRRPS
Trigger: AGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCA...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATAGGCCGAGAGCCACCTaGATGGTCCTCCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDRPRAT*MVLLAW
Trigger: CCATGCCAGGAGGACCATGCAGGTGGCTCTCGGCCT...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCAGGCCGAGAGCCACCTaGATGGTCCTCCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLRPRAT*MVLLAW
Trigger: CCATGCCAGGAGGACCATGCAGGTGGCTCTCGGCCT...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCACACAGCTGGGCCCTTaGCCGCCGTGGGTTTCCCGT +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGTQLGP*PPWVSR
Trigger: ACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGT...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCGTCCTCGGGAGGGTGTaGCATCCAGGAGGCGACACC +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWAVLGRV*HPGGDT
Trigger: GGTGTCGCCTCCTGGATGGCACACCCTCCCGAGGAC...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTGGATGGCGCTCTCCATaGGCAGGCCAGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RSPCCVWTEGSLAPRCLPGWRSP*AGQLPA
Trigger: TGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCC...AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCTTGCTGGCGGTGGGGTaGGTCTCGGCCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLLLAVG*VSALGA
Trigger: TGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAA...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCAAGAGTTGCTGGCGGTaGGGTGGGTCTCGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVKSCWR*GGSRPS
Trigger: CGAGGGCCGAGACCCACCCCACCGCCAGCAACTCTT...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCCCAGCTCGTGGGCAGTaGGGCCAGCATGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSPARGQ*GQHAGR
Trigger: TCTACCTGCATGCTGGCCCCACTGCCCACGAGCTGG...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGCTCATCATGTCTACTaGCTGATCTGCGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPAHHVY*LICGAG
Trigger: GCCGGCGCCGCAGATCAGCCAGTAGACATGATGAGC...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393359.7
CDS-3UTR TCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCGCACCAGCAGCCTGTTaGGTGCTGAGGCCGCACGCA +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSAPAAC*VLRPHA
Trigger: TGCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGC...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATCAGTCGACACCTCCTTaGCGATCTGCACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDQSTPP*RSAPGP
Trigger: AGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTG...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGCAGTCGACACCTCCTTaGCGATCTGCACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMQSTPP*RSAPGP
Trigger: AGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTG...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATATGGCCAGCAGCGTGTaGAAGAGTTGCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDMASSV*KSCWRW
Trigger: CCACCGCCAGCAACTCTTTCACACGCTGCTGGCCAT...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGTCCCTTCGTCCTGGCTaGCACAGAGCATGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWSLRPG*HRAWWS
Trigger: TGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGA...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCATGTCGCCAGCCATGGTaGAGCCACGTTTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPCRQPW*SHVSSA
Trigger: TGCACTGGAAACGTGGCTTCACCATGGCTGGCGACA...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCCAGTGCAAACGTGGCTaGCCCCTTGATGCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPQCKRG*PLDAGP
Trigger: GGGGCCCGCATCAAGGGGGCAGCCACGTTTGCACTG...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGCGCTGGGATATCCCTaGGACTGTGGCAAACATGCC +
Preference number: 4 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPALGYP*DCGKHA
Trigger: GGCATGTTTGCCACAGTCGCAGGGATATCCCAGCGC...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCACATTCTCCGACCAGTaGACGGGGGCGCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWATFSDQ*TGARWD
Trigger: ATCCCAGCGCGCCCCCGTGCACTGGTCGGAGAATGT...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCTGGCCTCTGCACCCTTaGCACTGGCGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSWPLHP*HWRRPS
Trigger: AGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCA...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGGCAGGCCAGCTCCCTaGAGCCTCTCGAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDGRPAP*SLSRRK
Trigger: CTTTCTTCTCGAGAGGCTGCAGGGAGCTGGCCTGCC...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGGTGTCAGGCAGCATCTaGAGCACCTGGGCTGCATCA +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWVSGSI*STWAAS
Trigger: TGATGCAGCCCAGGTGCTGCAGATGCTGCCTGACAC...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTAGGCCGAGAGCCACCTaGATGGTCCTCCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: RSPCCVWTEGSLAPRCLPRPRAT*MVLLAW
Trigger: CCATGCCAGGAGGACCATGCAGGTGGCTCTCGGCCT...AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTGTCTACTGGCTGATCTaGGGCGCCGGCGCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPVYWLI*GAGARR
Trigger: ACGGCGGGCGCCGGCGCCGCAGATCAGCCAGTAGAC...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393359.7
CDS-3UTR CCA 90 bp GCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAAGACGAAGCAGTCGTTaGTGCCCACGTAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ARAAPVASWASIQSWDPARRSSR*CPRRGP
Trigger: GGGACCTCTACGTGGGCACCAACGACTGCTTCGTCT...TGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTGGCAGTGAACGTGGCTaGCCCAGCAGGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPGSERG*PSRHWP
Trigger: AGGCCAGTGCCTGCTGGGCCAGCCACGTTCACTGCC...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGGGCCCCCGAAGGCACTaGCTCGAGGTTCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMGPRRH*LEVQHV
Trigger: AACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGCC...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGCCACCTGCCTGTGGCCCCCGAAGGCACTaGCTCGAGGTTCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: QLHHGHPFRAGTPQPPACGPRRH*LEVQHV
Trigger: AACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGCC...ACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCTGCACGGGGGCGCGCTaGGATATCCCTGCGACTGTG +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSCTGAR*DIPATV
Trigger: CACAGTCGCAGGGATATCCCAGCGCGCCCCCGTGCA...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCGCTTCCCGTGCAGGATaGCGCTCTCCATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLASRAG*RSPWAG
Trigger: GCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGC...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCAGCTCGTGGGCAGTaGGGCCAGCATGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSPARGQ*GQHAGR
Trigger: TCTACCTGCATGCTGGCCCCACTGCCCACGAGCTGG...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGCCACCTGCCTGTCTGCTGGCGGCACAGTaGGTGTGCACAAGACCACCA +
Preference number: 4 (lower is better)
Translates to: QLHHGHPFRAGTPQPPACLLAAQ*VCTRPP
Trigger: TGGTGGTCTTGTGCACACCCACTGTGCCGCCAGCAG...ACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCGGACGGAAGGCTCCCTaGCACCCAGATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSGRKAP*HPDVSL
Trigger: AAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCC...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GAAAGGAGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCCCAAGAGTGAGTGCTTaGGTACACAAGGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: ERSTQLGPCPPWVSRVRGPRVSA*VHKAES
Trigger: AGATTCTGCCTTGTGTACCCAAGCACTCACTCTTGG...GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCGCATCCATTCAGAGCTaGGACCCCGCAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWAASIQS*DPAATC
Trigger: GCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGC...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CAA 72 bp CTGTGCCCTCGCCACTCACCCAGGCAAGAGAGGACTTaGTCGCCAGCCATGGTGAAGCCACGTTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LCPRHSPRQERT*SPAMVKPRFQC
Trigger: GCACTGGAAACGTGGCTTCACCATGGCTGGCGACAAAGTCCTCTCTTGCCTGGGTGAGTGGCGAGGGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCCAGCCTGTTGAGTGCTaGGGCCGCACGCAGCTCGTT +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLQPVEC*GRTQLV
Trigger: AACGAGCTGCGTGCGGCCTCAGCACTCAACAGGCTG...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAGTCGACACCTCCTTaGCGATCTGCACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGQSTPP*RSAPGP
Trigger: AGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTG...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTGGGAAATGGGCCCATaGGTGAGCGGCGTGGATGGA +
Preference number: 4 (lower is better)
Translates to: RSPCCVWTEGSLAPRCLPWEMGP*VSGVDG
Trigger: TCCATCCACGCCGCTCACTCATGGGCCCATTTCCCA...AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTCGAAGCAGTCGTTGGTaGCCACGTAGAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RSPCCVWTEGSLAPRCLPRSSRW*PRRGPC
Trigger: GCAGGGACCTCTACGTGGGCACCAACGACTGCTTCG...AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCACAGTGCAAACGTGGCTaGCCCCTTGATGCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPQCKRG*PLDAGP
Trigger: GGGGCCCGCATCAAGGGGGCAGCCACGTTTGCACTG...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAAGGGTTCTCGTTCAGTaGAAACGTGGCTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: ARAAPVASWASIQSWDPARVLVQ*KRGCPL
Trigger: AAGGGGGCAGCCACGTTTGCACTGAACGAGAACCCT...TGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCAGCCACAGCGAGGGGCTaGTCGGCAGTCGACACCTCC +
Preference number: 4 (lower is better)
Translates to: RCLPSSWLTQSMVVICSSATARG*SAVDTS
Trigger: GGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGC...TGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCGCGGCCTCTCCTCACTaGAGTAGGGAAACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSAASPH*SRETGP
Trigger: AGGACCTGTTTCCCTACTGCAGTGAGGAGAGGCCGC...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCATTGCTACCTCTGTGCTaGGGACCTCGTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ARAAPVASWASIQSWDPALLPLC*GPRSGS
Trigger: GCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAA...TGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCACGTCTCGGTGGCCTCTaGACCCTTGCCACTGGCGGA +
Preference number: 4 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPRLGGL*TLATGG
Trigger: TCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACG...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCCGCAGCTTGGCCTaGGTCTCGGTGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPRRSLA*VSVASA
Trigger: TGCAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCG...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGTCGTGCACCAGGATATaGAGCGCCTTCTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWSCTRI*SAFSCS
Trigger: CGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGA...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCGTGTCAGGCAGCATCTaGAGCACCTGGGCTGCATCA +
Preference number: 4 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSVSGSI*STWAAS
Trigger: TGATGCAGCCCAGGTGCTGCAGATGCTGCCTGACAC...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCTCCTCCTGGCATGGATaGTGTCCCTCATGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWASSWHG*CPSWPP
Trigger: TGGGGGCCATGAGGGACAGCATCCATGCCAGGAGGA...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCGCGGCACAGTGGGTGTaGACAAGACCACCATTTGGG +
Preference number: 4 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLAAQWV*TRPPFG
Trigger: CCCAAATGGTGGTCTTGTGCACACCCACTGTGCCGC...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGGCGAGGAGTCCTTGTTaGGTATGGACGGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMARSPC*VWTEGS
Trigger: GGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCGTCCTCGGGAGGGTGTaGCATCCAGGAGGCGACACC +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSVLGRV*HPGGDT
Trigger: GGTGTCGCCTCCTGGATGGCACACCCTCCCGAGGAC...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTGCAGCCACCTGCCTGTaGTCCGGAAGTGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSAATCL*SGSEKH
Trigger: GTGCTTCTCACTTCCGGAGCACAGGCAGGTGGCTGC...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTTGGCCCAGCAGGCACTaGCCTCTCCTCCAACAGGAA +
Preference number: 4 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSWPSRH*PLLQQE
Trigger: TTCCTGTTGGAGGAGAGGCCAGTGCCTGCTGGGCCA...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTGGCCCCCGAAGGCACTaGCTCGAGGTTCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLGPRRH*LEVQHV
Trigger: AACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGCC...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCCCAGCTCGTGGGCAGTaGGGCCAGCATGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPPARGQ*GQHAGR
Trigger: TCTACCTGCATGCTGGCCCCACTGCCCACGAGCTGG...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCGAGAGCCACCTGCATaGTCCTCCTGGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGREPPA*SSWHGC
Trigger: GCATCCATGCCAGGAGGACCATGCAGGTGGCTCTCG...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCATTAAGTTTTCGGACCTaGCCAGGCCGAGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPLSFRT*PGREPP
Trigger: AGGTGGCTCTCGGCCTGGCCAGGTCCGAAAACTTAA...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGCCACCTGCCTGTGGTTTGTGTGTCTGCTaGCGGCACAGTGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: QLHHGHPFRAGTPQPPACGLCVC*RHSGCA
Trigger: TGCACACCCACTGTGCCGCCAGCAGACACACAAACC...ACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGTTCCCCTCGCACCCTTaGGCCAAGCTTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWFPSHP*AKLFKS
Trigger: GGACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAA...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTGCATCCATTCAGAGCTaGGACCCCGCAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPASIQS*DPAATC
Trigger: GCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGC...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTGTCTCCCTATCCTCTTaGCGATCGGCGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPVSLSS*RSAASP
Trigger: AGGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGAC...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCGTCATCGAGCGCTATaGCGTATGGAAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWRHRAL*RMERTQ
Trigger: CTGTGTCCTTTCCATACGTCATAGCGCTCGATGACG...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGGTCTGCGTACTCATaGAGAGGAGGGTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLRSAYS*RGGWDR
Trigger: CCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCT...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCGACAGAAGTTCTCAGTaGCCAGGAGGTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGDRSSQ*PGGPAG
Trigger: GCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTC...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCGACAGAAGTTCTCAGTaGCCAGGAGGTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWADRSSQ*PGGPAG
Trigger: GCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTC...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCATGGCCAGCAGCGTGTaGAAGAGTTGCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSMASSV*KSCWRW
Trigger: CCACCGCCAGCAACTCTTTCACACGCTGCTGGCCAT...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTTCCCTTCGTCCTGGCTaGCACAGAGCATGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSSLRPG*HRAWWS
Trigger: TGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGA...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCTGTCGCCAGCCATGGTaGAGCCACGTTTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWACRQPW*SHVSSA
Trigger: TGCACTGGAAACGTGGCTTCACCATGGCTGGCGACA...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCAGGGTCAGCCGTTTCTaGGGGCAAAGGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPRVSRF*GQRQSP
Trigger: TGGGCTCTGCCTTTGCCCTCAGAAACGGCTGACCCT...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCGGCAGCAGAATCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWAGSRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGATTCTGCTGCC...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCGGCAGCAGAATCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGGSRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGATTCTGCTGCC...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCCGAAGCAGTCGTTGGTaGCCACGTAGAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLRSSRW*PRRGPC
Trigger: GCAGGGACCTCTACGTGGGCACCAACGACTGCTTCG...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCCAGTGCAAACGTGGCTaGCCCCTTGATGCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLQCKRG*PLDAGP
Trigger: GGGGCCCGCATCAAGGGGGCAGCCACGTTTGCACTG...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTAGGGTTCTCGTTCAGTaGAAACGTGGCTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: AARSPCCVWTEGSLAPRCRVLVQ*KRGCPL
Trigger: AAGGGGGCAGCCACGTTTGCACTGAACGAGAACCCT...ACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCACCTCCTTGACGATCTaGACCCGGTCCTCGTACACC +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVTSLTI*TRSSYT
Trigger: GGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGT...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTGCTACCTCTGTGCTaGGGACCTCGTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSLLPLC*GPRSGS
Trigger: GCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAA...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GAAAGGAGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCGCAAAATACTTTTTGTaGTTCTCTAGCCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ERSTQLGPCPPWVSRVRGAKYFL*FSSQAA
Trigger: TGCTGCCTGGCTAGAGAAGCACAAAAAGTATTTTGC...GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCATGGCCTCTGCACCCTTaGCACTGGCGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSALHVQQAQKELGVPLAWPLHP*HWRRPS
Trigger: AGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCA...TGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGCGTCTCGGTGGCCTCTaGACCCTTGCCACTGGCGGA +
Preference number: 4 (lower is better)
Translates to: ADTEHGGHLLFMSSRLRKRLGGL*TLATGG
Trigger: TCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACG...CTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCTGCAGCGCCTTCTCATaGTCGCCCAGCTTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSCSAFS*SPSFPC
Trigger: GCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCA...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCGTGCACCAGGATATaGAGCGCCTTCTCATGCTCG +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMSCTRI*SAFSCS
Trigger: CGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGA...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGTCCTGCAGCTCGTaGACCAGGATATGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWAKSCSS*TRICSA
Trigger: GGCGCTGCATATCCTGGTGCACGAGCTGCAGGACTT...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCGTGTCAGGCAGCATCTaGAGCACCTGGGCTGCATCA +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGVSGSI*STWAAS
Trigger: TGATGCAGCCCAGGTGCTGCAGATGCTGCCTGACAC...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCAATGGGCAGAGGAGCTaGACTGACCAGGTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVNGQRS*TDQVSG
Trigger: GCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATT...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCGCGGCACAGTGGGTGTaGACAAGACCACCATTTGGG +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWAAAQWV*TRPPFG
Trigger: CCCAAATGGTGGTCTTGTGCACACCCACTGTGCCGC...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCGCGAGGAGTCCTTGTTaGGTATGGACGGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGARSPC*VWTEGS
Trigger: GGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTAGACGAAGCAGTCGTTaGTGCCCACGTAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLRRSSR*CPRRGP
Trigger: GGGACCTCTACGTGGGCACCAACGACTGCTTCGTCT...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGCCCAGCAGGCACTaGCCTCTCCTCCAACAGGAA +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPWPSRH*PLLQQE
Trigger: TTCCTGTTGGAGGAGAGGCCAGTGCCTGCTGGGCCA...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCGAGCGCTATGACGTATaGAAAGGACACAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGERYDV*KGHSRP
Trigger: GGGGCGGCTGTGTCCTTTCCATACGTCATAGCGCTC...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGAGCGTGTGGAGTCCTaGACATCGCCATTCACAATG +
Preference number: 4 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPERVES*TSPFTM
Trigger: CATTGTGAATGGCGATGTCCAGGACTCCACACGCTC...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCTGCACCCTTGCCACTaGCGGAGGCCCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCLHPCH*RRPSAA
Trigger: TGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAG...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTTGGCCTGCGTCTCGGTaGCCTCTGCACCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCWPASR*PLHPCH
Trigger: GTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCA...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTTGGCCTGCGTCTCGGTaGCCTCTGCACCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPWPASR*PLHPCH
Trigger: GTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCA...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCTTCCCGTGCAGGATaGCGCTCTCCATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLASRAG*RSPWAG
Trigger: GCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGC...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATTGCTGGCGGTGGGGTaGGTCTCGGCCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASLLAVG*VSALGA
Trigger: TGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAA...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCACAGCATGCAGGTAGATaGCCAGCAGCGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPQHAGR*PAACER
Trigger: TCTTTCACACGCTGCTGGCCATCTACCTGCATGCTG...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTTCAAATTCGGTGGCGTaGCGGTTCAGCAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLSNSVA*RFSRST
Trigger: CGTGGACCTGCTGAACCGCCACGCCACCGAATTTGA...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCCGAGAGCCACCTGCATaGTCCTCCTGGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPREPPA*SSWHGC
Trigger: GCATCCATGCCAGGAGGACCATGCAGGTGGCTCTCG...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCCTGCTGGCGGCACAGTaGGTGTGCACAAGACCACCA +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSLLAAQ*VCTRPP
Trigger: TGGTGGTCTTGTGCACACCCACTGTGCCGCCAGCAG...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCAGTCCTTGTTGCGTATaGACGGAAGGCTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSSPCCV*TEGSLA
Trigger: TGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACT...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGCATGAGTCTAAAGGTTaGAGTGTGGGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMHESKG*SVGVVG
Trigger: CCCCACCACCCCCACACTCCAACCTTTAGACTCATG...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCCCACGCACTCTATGTTaGCGCGCTCCTTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSPRTLC*RAPCRP
Trigger: TGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGG...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCAGCCTGTTGAGTGCTaGGGCCGCACGCAGCTCGTT +
Preference number: 4 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCQPVEC*GRTQLV
Trigger: AACGAGCTGCGTGCGGCCTCAGCACTCAACAGGCTG...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCGACAGAAGTTCTCAGTaGCCAGGAGGTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSDRSSQ*PGGPAG
Trigger: GCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTC...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTATTCATACAGGTCTaGGCGTGTGGAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDVFIQV*ACGVLD
Trigger: GTCCAGGACTCCACACGCTCAGACCTGTATGAATAC...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCCAAAGGTCTCTTGGTaGAAACCTGAACTCCGACCT +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWPKVSW*KPELRP
Trigger: AGGTCGGAGTTCAGGTTTTCACCAAGAGACCTTTGG...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTCCCTTCGTCCTGGCTaGCACAGAGCATGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPSLRPG*HRAWWS
Trigger: TGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGA...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCAATCATGTCTACTGGCTaGTCTGCGGCGCCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASIMSTG*SAAPAP
Trigger: GGGCGCCGGCGCCGCAGATCAGCCAGTAGACATGAT...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393359.7
CDS-3UTR TCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCCCTGTGCTCCGGAAGTaGGAAGCACATGTAAGCACG +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVPVLRK*EAHVST
Trigger: CGTGCTTACATGTGCTTCTCACTTCCGGAGCACAGG...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCGCGGCCTCTCCTCACTaGAGTAGGGAAACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLAASPH*SRETGP
Trigger: AGGACCTGTTTCCCTACTGCAGTGAGGAGAGGCCGC...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCGCGCTGGGATATCCCTaGGACTGTGGCAAACATGCC +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSALGYP*DCGKHA
Trigger: GGCATGTTTGCCACAGTCGCAGGGATATCCCAGCGC...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGCTCCTTGTAGCCATTTaGTACCTCTGTGCTGCGGAC +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMLLVAI*YLCAAD
Trigger: GTCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAG...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATCTCCTTGTAGCCATTTaGTACCTCTGTGCTGCGGAC +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDLLVAI*YLCAAD
Trigger: GTCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAG...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCGTCGTGGTCAGCCTCTaGATACAGTTTGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSVVVSL*IQFEQG
Trigger: GCCTTGCTCAAACTGTATGCAGAGGCTGACCACGAC...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACCTGGCGGAGGCCCTCTaGAGCAGCACCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNLAEAL*SSTSSR
Trigger: CCTGGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAG...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCACGTCTCGGTGGCCTCTaGACCCTTGCCACTGGCGGA +
Preference number: 4 (lower is better)
Translates to: RQPEALVHPRVSAWVHKARLGGL*TLATGG
Trigger: TCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACG...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATCGCCCAGCTTCCCGTaGAGGATGGCGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: RCLPSSWLTQSMVVICSSSPSFP*RMALSM
Trigger: CATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGA...TGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTTCGCCCAGCTTCCCGTaGAGGATGGCGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPSPSFP*RMALSM
Trigger: CATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGA...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTAAGTCCTGCAGCTCGTaGACCAGGATATGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPKSCSS*TRICSA
Trigger: GGCGCTGCATATCCTGGTGCACGAGCTGCAGGACTT...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTGCCGCTGCAAAGTCCTaGAGCTCGTGCACCAGGATA +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPAAAKS*SSCTRI
Trigger: TATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGC...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCGCCGCTGCAAAGTCCTaGAGCTCGTGCACCAGGATA +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSAAAKS*SSCTRI
Trigger: TATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGC...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCGTAGTCCTCGGCCGCTaGAAAGTCCTGCAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSVVLGR*KVLQLV
Trigger: CACGAGCTGCAGGACTTTGCAGCGGCCGAGGACTAC...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCCTGCAGCACCTGGGCTaGATCAAATTCGGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSLQHLG*IKFGGV
Trigger: CACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAG...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATCCTCCTGGCATGGATaGTGTCCCTCATGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPSSWHG*CPSWPP
Trigger: TGGGGGCCATGAGGGACAGCATCCATGCCAGGAGGA...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCGCGAGGAGTCCTTGTTaGGTATGGACGGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPARSPC*VWTEGS
Trigger: GGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCAGACCCCGCAGCCACCTaGCTGTGCTCCGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: RQPEALVHPRVSAWVHKADPAAT*LCSGSE
Trigger: CTCACTTCCGGAGCACAGGCAGGTGGCTGCGGGGTC...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTGCAAAAAGCAAGGGCTaGCCCAGTTGCATCATGGGC +
Preference number: 4 (lower is better)
Translates to: RSPCCVWTEGSLAPRCLPAKSKG*PSCIMG
Trigger: GCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGC...AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCCAGACACAGGAAGTaGCCGTCCACAGCCACAGCG +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLARHRK*PSTATA
Trigger: CGCTGTGGCTGTGGACGGCCACTTCCTGTGTCTGGC...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTGCCAGACACAGGAAGTaGCCGTCCACAGCCACAGCG +
Preference number: 4 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCARHRK*PSTATA
Trigger: CGCTGTGGCTGTGGACGGCCACTTCCTGTGTCTGGC...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTGCACGGGGGCGCGCTaGGATATCCCTGCGACTGTG +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNCTGAR*DIPATV
Trigger: CACAGTCGCAGGGATATCCCAGCGCGCCCCCGTGCA...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTCCCCCTGGGTCAGCTaGTTCAGGTCTGCGTACTCA +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPSPWVS*FRSAYS
Trigger: TGAGTACGCAGACCTGAACCAGCTGACCCAGGGGGA...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCTCCCCCTGGGTCAGCTaGTTCAGGTCTGCGTACTCA +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLSPWVS*FRSAYS
Trigger: TGAGTACGCAGACCTGAACCAGCTGACCCAGGGGGA...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTTCCAGCAGGCTGTCGTaGTCAGCCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLSSRLS*SASAYS
Trigger: ACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGA...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCACAGGTCTGAGCGTGTaGAGTCCTGGACATCGCCAT +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGTGLSV*SPGHRH
Trigger: ATGGCGATGTCCAGGACTCCACACGCTCAGACCTGT...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACCTGCACCCTTGCCACTaGCGGAGGCCCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNLHPCH*RRPSAA
Trigger: TGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAG...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATCAGCATGCAGGTAGATaGCCAGCAGCGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDQHAGR*PAACER
Trigger: TCTTTCACACGCTGCTGGCCATCTACCTGCATGCTG...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCTGCATCAAATTCGGTaGCGTGGCGGTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSLHQIR*RGGSAG
Trigger: ACCTGCTGAACCGCCACGCCACCGAATTTGATGCAG...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCGGTTTGTGTGTCTGCTaGCGGCACAGTGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSGLCVC*RHSGCA
Trigger: TGCACACCCACTGTGCCGCCAGCAGACACACAAACC...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCCAGGACTGGATGAGCTaGGGTTTGTGTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVQDWMS*GLCVCW
Trigger: CCAGCAGACACACAAACCCCAGCTCATCCAGTCCTG...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTCAGGACTGGATGAGCTaGGGTTTGTGTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLQDWMS*GLCVCW
Trigger: CCAGCAGACACACAAACCCCAGCTCATCCAGTCCTG...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCTGTCTCCCTTCGTCCTaGCTGACACAGAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWACLPSS*LTQSMV
Trigger: CACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCAGTCCTTGTTGCGTATaGACGGAAGGCTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGSPCCV*TEGSLA
Trigger: TGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACT...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCCTAAAGGTTGGAGTGTaGGGGTGGTGGGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSLKVGV*GWWGIP
Trigger: GGGGATCCCCCACCACCCCCACACTCCAACCTTTAG...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCAAAAGGAGCACACAGCTaGGCCCTTGCCCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASKGAHS*ALARRG
Trigger: CCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTT...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCCACGCACTCTATGTTaGCGCGCTCCTTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPPRTLC*RAPCRP
Trigger: TGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGG...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp ATGTACATTCATAGAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGCAGCCTGTTGAGTGCTaGGGCCGCACGCAGCTCGTT +
Preference number: 4 (lower is better)
Translates to: MYIHRAWSAARSPCCVWTQPVEC*GRTQLV
Trigger: AACGAGCTGCGTGCGGCCTCAGCACTCAACAGGCTG...CGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGTCTCCCTATCCTCTTaGCGATCGGCGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLVSLSS*RSAASP
Trigger: AGGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGAC...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTGTCTGCTTCTGTTGCTaGTCCAACATGCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: AARSPCCVWTEGSLAPRCVCFCC*SNMLWT
Trigger: AGTCCACAGCATGTTGGATCAGCAACAGAAGCAGAC...ACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCGTTCAGGTAGCTCATaGGGAAGCGTTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGRSGSS*GSVCTW
Trigger: CCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACG...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGCCTCTGCATACAGTTTaGGCAAGGCTGTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMPLHTV*ARLCRC
Trigger: ACATCGACACAGCCTTGCTCAAACTGTATGCAGAGG...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGCCACCTGCCTGTCCTCTGCATACAGTTTaGGCAAGGCTGTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: QLHHGHPFRAGTPQPPACPLHTV*ARLCRC
Trigger: ACATCGACACAGCCTTGCTCAAACTGTATGCAGAGG...ACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTATGGCCAGCAGCGTGTaGAAGAGTTGCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPMASSV*KSCWRW
Trigger: CCACCGCCAGCAACTCTTTCACACGCTGCTGGCCAT...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCGGATTTTGGCATATCTaGCAAAGCTTTTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: STQLGPCPPWVSRVRGFFGFWHI*QSFLSE
Trigger: CTCAGACAAAAAGCTTTGTCAGATATGCCAAAATCC...GAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGTGCCAGGACTGGATaGGCTGGGGTTTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLSARTG*AGVCVS
Trigger: AGACACACAAACCCCAGCTCATCCAGTCCTGGCACT...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GAAAGGAGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCACATATGCAGTAATATaGCCATTCTACAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: ERSTQLGPCPPWVSRVRGTYAVI*PFYNRV
Trigger: GACTCTGTTGTAGAATGGTCATATTACTGCATATGT...GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTCCTGTGCTCCGGAAGTaGGAAGCACATGTAAGCACG +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPPVLRK*EAHVST
Trigger: CGTGCTTACATGTGCTTCTCACTTCCGGAGCACAGG...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCACCTCCTTGACGATCTaGACCCGGTCCTCGTACACC +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSTSLTI*TRSSYT
Trigger: GGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGT...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCGCGCTGGGATATCCCTaGGACTGTGGCAAACATGCC +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSALGYP*DCGKHA
Trigger: GGCATGTTTGCCACAGTCGCAGGGATATCCCAGCGC...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCATTTGCTACCTCTGTaGTGCGGACCTCGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGHLLPL*CGPRSG
Trigger: ACCTGAACGAGGTCCGCAGCACAGAGGTAGCAAATG...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCCTCCTTGTAGCCATTTaGTACCTCTGTGCTGCGGAC +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVLLVAI*YLCAAD
Trigger: GTCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAG...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCAGGCAGGCCAGCTCCCTaGAGCCTCTCGAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: SSALHVQQAQKELGVPLAGRPAP*SLSRRK
Trigger: CTTTCTTCTCGAGAGGCTGCAGGGAGCTGGCCTGCC...TGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCAGGCAGGCCAGCTCCCTaGAGCCTCTCGAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: RCLPSSWLTQSMVVICSSGRPAP*SLSRRK
Trigger: CTTTCTTCTCGAGAGGCTGCAGGGAGCTGGCCTGCC...TGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAAGTCCTGCAGCTCGTaGACCAGGATATGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSKSCSS*TRICSA
Trigger: GGCGCTGCATATCCTGGTGCACGAGCTGCAGGACTT...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCACCTGGGTCTGGACTaGATGAGGAAGACTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSHLGLD*MRKTPF
Trigger: AAAGGGAGTCTTCCTCATGCAGTCCAGACCCAGGTG...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGGGCTGCCCCAGTTaGATCATGGGCATCCATTCA +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWAKGCPS*IMGIHS
Trigger: TGAATGGATGCCCATGATGCAACTGGGGCAGCCCTT...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGGGCAGTGAACGTGGCTaGCCCAGCAGGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPGSERG*PSRHWP
Trigger: AGGCCAGTGCCTGCTGGGCCAGCCACGTTCACTGCC...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCATATCCCTGCGACTGTaGCAAACATGCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPISLRL*QTCPAL
Trigger: GAGGGCTGGGCATGTTTGCCACAGTCGCAGGGATAT...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCAGAGCGCTATGACGTATaGAAAGGACACAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPERYDV*KGHSRP
Trigger: GGGGCGGCTGTGTCCTTTCCATACGTCATAGCGCTC...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATAAGTCCTGTAGGATATaGCCCTCCTTAAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDKSCRI*PSLKGS
Trigger: GCTGCCCTTTAAGGAGGGCCATATCCTACAGGACTT...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCAAGTCCTGTAGGATATaGCCCTCCTTAAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLKSCRI*PSLKGS
Trigger: GCTGCCCTTTAAGGAGGGCCATATCCTACAGGACTT...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAGCATGCAGGTAGATaGCCAGCAGCGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGQHAGR*PAACER
Trigger: TCTTTCACACGCTGCTGGCCATCTACCTGCATGCTG...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCTTAAGTTTTCGGACCTaGCCAGGCCGAGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSLSFRT*PGREPP
Trigger: AGGTGGCTCTCGGCCTGGCCAGGTCCGAAAACTTAA...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCTTTTTGTCTGAGAGTTaGATTGAGCTTCCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVFLSES*IELPFN
Trigger: GTTGAAAGGAAGCTCAATCCAACTCTCAGACAAAAA...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCCTGCTGGCGGCACAGTaGGTGTGCACAAGACCACCA +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLLLAAQ*VCTRPP
Trigger: TGGTGGTCTTGTGCACACCCACTGTGCCGCCAGCAG...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTGGACGGAAGGCTCCCTaGCACCCAGATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPGRKAP*HPDVSL
Trigger: AAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCC...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTAGTCCTTGTTGCGTATaGACGGAAGGCTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPSPCCV*TEGSLA
Trigger: TGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACT...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACTAAAGGTTGGAGTGTaGGGGTGGTGGGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: SSALHVQQAQKELGVPLALKVGV*GWWGIP
Trigger: GGGGATCCCCCACCACCCCCACACTCCAACCTTTAG...TGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAGGCACATAAAGTGCTaGAGGGTGACACAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWARHIKC*RVTQPV
Trigger: GACAGGCTGTGTCACCCTCCAGCACTTTATGTGCCT...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCCGTTCACGGGCTTCTTaGAGCCCAAGTGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSRSRAS*SPSVSA
Trigger: TGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACG...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCATGTTCACCCACAACTaGACTGCAGCAGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVMFTHN*TAAASW
Trigger: CCAAGATGCTGCTGCAGTTCAGTTGTGGGTGAACAT...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCGTATTCATACAGGTCTaGGCGTGTGGAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSVFIQV*ACGVLD
Trigger: GTCCAGGACTCCACACGCTCAGACCTGTATGAATAC...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTGAATCTTTTGGGAGCTaGGAGCCGGAGAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLESFGS*EPERKK
Trigger: TTTCTTCCTCTCCGGCTCTCAGCTCCCAAAAGATTC...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGACCTCCTTGACGATCTaGACCCGGTCCTCGTACACC +
Preference number: 4 (lower is better)
Translates to: ADTEHGGHLLFMSSRLRKTSLTI*TRSSYT
Trigger: GGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGT...CTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCGCCACAGCGAGGGGCTaGTCGGCAGTCGACACCTCC +
Preference number: 4 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAATARG*SAVDTS
Trigger: GGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGC...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCAAGCCTCTTCTACTCTaGGGCTTGCTAGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLKPLLL*GLLEDP
Trigger: AGGATCTTCTAGCAAGCCGCAGAGTAGAAGAGGCTT...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATAAGCCTCTTCTACTCTaGGGCTTGCTAGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDKPLLL*GLLEDP
Trigger: AGGATCTTCTAGCAAGCCGCAGAGTAGAAGAGGCTT...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTCATTTGCTACCTCTGTaGTGCGGACCTCGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPHLLPL*CGPRSG
Trigger: ACCTGAACGAGGTCCGCAGCACAGAGGTAGCAAATG...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCATAGAGCAGTCCAAGTaGAAAATACTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: AIQEATPPSSTRALPPAVIEQSK*KILFVL
Trigger: AAGCACAAAAAGTATTTTGCACTTGGACTGCTCTAT...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTAATGGGCAGAGGAGCTaGACTGACCAGGTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPNGQRS*TDQVSG
Trigger: GCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATT...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCATGGGGTTTGTGTGTCTaGTGGCGGCACAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSALHVQQAQKELGVPLAWGLCV*WRHSGC
Trigger: ACACCCACTGTGCCGCCAGCAGACACACAAACCCCA...TGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCCTTTTCAAGTCCGAGTaGCAGGACTGGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLLFKSE*QDWMSW
Trigger: CCAGCTCATCCAGTCCTGGCACTCGGACTTGAAAAG...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCAGCATGGTGGTCATCTaGTCTTCATGTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPSMVVI*SSCPAG
Trigger: GCCTGCTGGACATGAAGAGCAGATGACCACCATGCT...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGCATGGTGGTCATCTaGTCTTCATGTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLSMVVI*SSCPAG
Trigger: GCCTGCTGGACATGAAGAGCAGATGACCACCATGCT...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATGGAGAACGTGTTTCTaGAGGAGGGCAAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPWRTCF*RRARLT
Trigger: GGTCAGCCTTGCCCTCCTGCAGAAACACGTTCTCCA...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCAAGACGAAGCAGTCGTTaGTGCCCACGTAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RCLPSSWLTQSMVVICSSRRSSR*CPRRGP
Trigger: GGGACCTCTACGTGGGCACCAACGACTGCTTCGTCT...TGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGTCAAATTCGGTGGCGTaGCGGTTCAGCAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: ADTEHGGHLLFMSSRLRKSNSVA*RFSRST
Trigger: CGTGGACCTGCTGAACCGCCACGCCACCGAATTTGA...CTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCACGAGAGCCACCTGCATaGTCCTCCTGGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASREPPA*SSWHGC
Trigger: GCATCCATGCCAGGAGGACCATGCAGGTGGCTCTCG...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCATTAAGTTTTCGGACCTaGCCAGGCCGAGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: PSSWLTQSMVVICSSCPALSFRT*PGREPP
Trigger: AGGTGGCTCTCGGCCTGGCCAGGTCCGAAAACTTAA...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCCAAGGCAGAATCTTTTaGGAGCTGAGAGCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPQGRIF*ELRAGE
Trigger: CTCTCCGGCTCTCAGCTCCCAAAAGATTCTGCCTTG...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCAAGAGTGAGTGCTTaGGTACACAAGGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLPRVSA*VHKAES
Trigger: AGATTCTGCCTTGTGTACCCAAGCACTCACTCTTGG...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCACGTCATCGAGCGCTATaGCGTATGGAAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPRHRAL*RMERTQ
Trigger: CTGTGTCCTTTCCATACGTCATAGCGCTCGATGACG...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCCCAAAGGTCTCTTGGTaGAAACCTGAACTCCGACCT +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLPKVSW*KPELRP
Trigger: AGGTCGGAGTTCAGGTTTTCACCAAGAGACCTTTGG...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATACAGCTAAGTGGGTGTaGTACTCTTCTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDTAKWV*YSSFCS
Trigger: ACTGCAGAAAGAAGAGTATCACACCCACTTAGCTGT...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCAAGTGCCAGGACTGGATaGGCTGGGGTTTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSALHVQQAQKELGVPLASARTG*AGVCVS
Trigger: AGACACACAAACCCCAGCTCATCCAGTCCTGGCACT...TGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCAAAATGGGCCCATGAGTaGGCGGCGTGGATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RQPEALVHPRVSAWVHKAKWAHE*AAWMEN
Trigger: GTTCTCCATCCACGCCGCTCACTCATGGGCCCATTT...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGACATTCTCCGACCAGTaGACGGGGGCGCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKTFSDQ*TGARWD
Trigger: ATCCCAGCGCGCCCCCGTGCACTGGTCGGAGAATGT...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCATTGCTACCTCTGTGCTaGGGACCTCGTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SSALHVQQAQKELGVPLALLPLC*GPRSGS
Trigger: GCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAA...TGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCATAGAGCAGTCCAAGTaGAAAATACTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: STQLGPCPPWVSRVRGFFIEQSK*KILFVL
Trigger: AAGCACAAAAAGTATTTTGCACTTGGACTGCTCTAT...GAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGCACCCACAACTGAACTaGAGCAGCATCTTGGTTATT +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMHPQLN*SSILVI
Trigger: AATAACCAAGATGCTGCTGCAGTTCAGTTGTGGGTG...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCATGGGGTTTGTGTGTCTaGTGGCGGCACAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RQPEALVHPRVSAWVHKAWGLCV*WRHSGC
Trigger: ACACCCACTGTGCCGCCAGCAGACACACAAACCCCA...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGGCAAAAAGCAAGGGCTaGCCCAGTTGCATCATGGGC +
Preference number: 4 (lower is better)
Translates to: ADTEHGGHLLFMSSRLRKAKSKG*PSCIMG
Trigger: GCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGC...CTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCATATCCCTGCGACTGTaGCAAACATGCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLISLRL*QTCPAL
Trigger: GAGGGCTGGGCATGTTTGCCACAGTCGCAGGGATAT...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTAAGTCCTGTAGGATATaGCCCTCCTTAAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPKSCRI*PSLKGS
Trigger: GCTGCCCTTTAAGGAGGGCCATATCCTACAGGACTT...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCTGAAATTTTTCCTTTaGAATGTTCCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLLKFFL*NVPPGS
Trigger: GGAGCCCGGAGGAACATTCCAAAGGAAAAATTTCAG...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCATCCCGGACATCAAGCTaGCCGCTTCTGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSALHVQQAQKELGVPLASRTSS*PLLKSS
Trigger: AGAGCTCTTCAGAAGCGGCCAGCTTGATGTCCGGGA...TGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTGGAAGCGTTTGCACTTaGCCATCTTCTCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCGSVCT*PSSPGP
Trigger: GGGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCC...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGTCCAGCAGGCTGTCGTaGTCAGCCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: ADTEHGGHLLFMSSRLRKSSRLS*SASAYS
Trigger: ACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGA...CTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGAGCGTGTGGAGTCCTaGACATCGCCATTCACAATG +
Preference number: 4 (lower is better)
Translates to: PSSWLTQSMVVICSSCPAERVES*TSPFTM
Trigger: CATTGTGAATGGCGATGTCCAGGACTCCACACGCTC...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTGGATGGCGCTCTCCATaGGCAGGCCAGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TESPTGKTHDWALSSHQFGWRSP*AGQLPA
Trigger: TGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCC...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGCTGCATCAAATTCGGTaGCGTGGCGGTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ADTEHGGHLLFMSSRLRKLHQIR*RGGSAG
Trigger: ACCTGCTGAACCGCCACGCCACCGAATTTGATGCAG...CTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAAGCATCTGCAGCACCTaGGCTGCATCAAATTCGGTG +
Preference number: 4 (lower is better)
Translates to: PSSWLTQSMVVICSSCPASICST*AASNSV
Trigger: CACCGAATTTGATGCAGCCCAGGTGCTGCAGATGCT...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTTTCCCCTCGCACCCTTaGGCCAAGCTTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPFPSHP*AKLFKS
Trigger: GGACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAA...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCATGTCTCCCTTCGTCCTaGCTGACACAGAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: SSALHVQQAQKELGVPLACLPSS*LTQSMV
Trigger: CACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA...TGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGGGACGGAAGGCTCCCTaGCACCCAGATGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPGRKAP*HPDVSL
Trigger: AAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCC...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCTACATTCATAGAGCCTaGTCAGCAGCGAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLYIHRA*SAARSP
Trigger: AGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTA...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGAATTGCTCTATTCGATaGCACAGTTACAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: LARRGFPVSAASSRRGEQNCSIR*HSYKSA
Trigger: TGCTGATTTGTAACTGTGCCATCGAATAGAGCAATT...CTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACCGTTCACGGGCTTCTTaGAGCCCAAGTGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNRSRAS*SPSVSA
Trigger: TGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACG...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCTGCTGTAATTGTGGATaGTGTACTGAGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGCCNCG*CTEWSE
Trigger: CTCTGACCACTCAGTACATCATCCACAATTACAGCA...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCTGCTGTAATTGTGGATaGTGTACTGAGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWACCNCG*CTEWSE
Trigger: CTCTGACCACTCAGTACATCATCCACAATTACAGCA...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCAGTCTGCTTCTGTTGCTaGTCCAACATGCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPVCFCC*SNMLWT
Trigger: AGTCCACAGCATGTTGGATCAGCAACAGAAGCAGAC...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGTTAGCTTCCAGGAACTaGAGTTGTGCAAACTGTATA +
Preference number: 4 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWLASRN*SCANCI
Trigger: TATACAGTTTGCACAACTTCAGTTCCTGGAAGCTAA...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTACAGCTAAGTGGGTGTaGTACTCTTCTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLTAKWV*YSSFCS
Trigger: ACTGCAGAAAGAAGAGTATCACACCCACTTAGCTGT...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCAAGTGCCAGGACTGGATaGGCTGGGGTTTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: RQPEALVHPRVSAWVHKASARTG*AGVCVS
Trigger: AGACACACAAACCCCAGCTCATCCAGTCCTGGCACT...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCCCACGTAGAGGTCCCTaGCGCAGCACTCCACGCACT +
Preference number: 4 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAPRRGP*RSTPRT
Trigger: AGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGG...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCAAGGGTTCTCGTTCAGTaGAAACGTGGCTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASRVLVQ*KRGCPL
Trigger: AAGGGGGCAGCCACGTTTGCACTGAACGAGAACCCT...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGATAAATCCCGCCTGCTaGAGAATCCTTCTGTACATT +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMINPAC*RILLYI
Trigger: AATGTACAGAAGGATTCTGCAGCAGGCGGGATTTAT...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCCAGCTGGTTCAGGTCTaGGTACTCATGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLQLVQV*VLMKRR
Trigger: CCTCCTCTTCATGAGTACGCAGACCTGAACCAGCTG...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTGTCGTGGTCAGCCTCTaGATACAGTTTGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCVVVSL*IQFEQG
Trigger: GCCTTGCTCAAACTGTATGCAGAGGCTGACCACGAC...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCCACCCACAACTGAACTaGAGCAGCATCTTGGTTATT +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVHPQLN*SSILVI
Trigger: AATAACCAAGATGCTGCTGCAGTTCAGTTGTGGGTG...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATCCCCATGAGGCTCTGTaGCCTCGCCACTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHPHEAL*PRHSPR
Trigger: CCTGGGTGAGTGGCGAGGGCACAGAGCCTCATGGGG...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCATGGAGAACGTGTTTCTaGAGGAGGGCAAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: RQPEALVHPRVSAWVHKAWRTCF*RRARLT
Trigger: GGTCAGCCTTGCCCTCCTGCAGAAACACGTTCTCCA...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCTGCACGGGGGCGCGCTaGGATATCCCTGCGACTGTG +
Preference number: 4 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPCTGAR*DIPATV
Trigger: CACAGTCGCAGGGATATCCCAGCGCGCCCCCGTGCA...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCCCGGACATCAAGCTaGCCGCTTCTGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNSRTSS*PLLKSS
Trigger: AGAGCTCTTCAGAAGCGGCCAGCTTGATGTCCGGGA...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp ATGTACATTCATAGAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGTCCCGGACATCAAGCTaGCCGCTTCTGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: MYIHRAWSAARSPCCVWTSRTSS*PLLKSS
Trigger: AGAGCTCTTCAGAAGCGGCCAGCTTGATGTCCGGGA...CGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACGGAAGCGTTTGCACTTaGCCATCTTCTCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNGSVCT*PSSPGP
Trigger: GGGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCC...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTATAAATCAGATTTCTaGAGCAGCCGCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SALHVQQAQKELGVPLAPYKSDF*SSRRSL
Trigger: CAAGCTGCGGCGGCTGCTCCAGAAATCTGATTTATA...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGCCACCTGCCTGTAGTAGACCTCTGTCTTaGATTACTATGTACCTGGAC +
Preference number: 4 (lower is better)
Translates to: QLHHGHPFRAGTPQPPACSRPLS*ITMYLD
Trigger: GTCCAGGTACATAGTAATCCAAGACAGAGGTCTACT...ACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTAGTAGACCTCTGTCTTaGATTACTATGTACCTGGAC +
Preference number: 4 (lower is better)
Translates to: AARSPCCVWTEGSLAPRCSRPLS*ITMYLD
Trigger: GTCCAGGTACATAGTAATCCAAGACAGAGGTCTACT...ACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCAGGCACATAAAGTGCTaGAGGGTGACACAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLRHIKC*RVTQPV
Trigger: GACAGGCTGTGTCACCCTCCAGCACTTTATGTGCCT...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCTACATTTTGTGTATCTaGGACCCAATCGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLYILCI*DPIGTK
Trigger: CTTTGTCCCGATTGGGTCCCAGATACACAAAATGTA...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCGCTGTTTGGTGGCAGTaGACGTGGCTGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPAVWWQ*TWLAQQ
Trigger: CTGCTGGGCCAGCCACGTTCACTGCCACCAAACAGC...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCTGCTGTAATTGTGGATaGTGTACTGAGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLCCNCG*CTEWSE
Trigger: CTCTGACCACTCAGTACATCATCCACAATTACAGCA...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACCGTTCAGGTAGCTCATaGGGAAGCGTTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNRSGSS*GSVCTW
Trigger: CCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACG...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTATGTACCTGGACAGGTaGACTCTTGTATGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLMYLDR*TLVCFC
Trigger: ACAGAAACATACAAGAGTTCACCTGTCCAGGTACAT...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTAACAAACAGGACAGATaGCTCTCTCAACAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPNKQDR*LSQQES
Trigger: GCTCTCTTGTTGAGAGAGTCATCTGTCCTGTTTGTT...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCTCAGAAATATGATTTaGGAAAAGGGCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLLRNMI*EKGLVG
Trigger: TCCTACAAGGCCCTTTTCTCAAATCATATTTCTGAG...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGCAACGCAGCCTGAGTaGCATCCCTACATTAATACT +
Preference number: 4 (lower is better)
Translates to: PSSWLTQSMVVICSSCPAATQPE*HPYINT
Trigger: AGTATTAATGTAGGGATGTCACTCAGGCTGCGTTGC...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCATAAATCCCGCCTGCTaGAGAATCCTTCTGTACATT +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWAINPAC*RILLYI
Trigger: AATGTACAGAAGGATTCTGCAGCAGGCGGGATTTAT...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATTCGCCCAGCTTCCCGTaGAGGATGGCGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHSPSFP*RMALSM
Trigger: CATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGA...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGCTGCAGCACCTGGGCTaGATCAAATTCGGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKLQHLG*IKFGGV
Trigger: CACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAG...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACCTTTTCAAGTCCGAGTaGCAGGACTGGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNLFKSE*QDWMSW
Trigger: CCAGCTCATCCAGTCCTGGCACTCGGACTTGAAAAG...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCTTTCAAATCAGCAGATaGCATGACAGGAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVFQISR*HDRKGA
Trigger: TGCTCCTTTCCTGTCATGGCATCTGCTGATTTGAAA...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGATATCCCTGCGACTGTaGCAAACATGCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPISLRL*QTCPAL
Trigger: GAGGGCTGGGCATGTTTGCCACAGTCGCAGGGATAT...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTCTGAAATTTTTCCTTTaGAATGTTCCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPLKFFL*NVPPGS
Trigger: GGAGCCCGGAGGAACATTCCAAAGGAAAAATTTCAG...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTTACATTCATAGAGCCTaGTCAGCAGCGAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VVICSSCPAGSERTRSSPYIHRA*SAARSP
Trigger: AGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTA...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGGCCCCAGTTGCATCATaGGCATCCATTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPAPVAS*ASIQSW
Trigger: CCAGCTCTGAATGGATGCCCATGATGCAACTGGGGC...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATGTCTCCCTATCCTCTTaGCGATCGGCGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHVSLSS*RSAASP
Trigger: AGGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGAC...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCAGTCTGCTTCTGTTGCTaGTCCAACATGCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASVCFCC*SNMLWT
Trigger: AGTCCACAGCATGTTGGATCAGCAACAGAAGCAGAC...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCTTAGCTTCCAGGAACTaGAGTTGTGCAAACTGTATA +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGLASRN*SCANCI
Trigger: TATACAGTTTGCACAACTTCAGTTCCTGGAAGCTAA...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTGGATTTTGGCATATCTaGCAAAGCTTTTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLGFWHI*QSFLSE
Trigger: CTCAGACAAAAAGCTTTGTCAGATATGCCAAAATCC...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCCACATGACTGGGCTTTaGGCTCACACCAATTTACAC +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLHMTGL*AHTNLH
Trigger: GTGTAAATTGGTGTGAGCTCAAAGCCCAGTCATGTG...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCGCGGCCTCTCCTCACTaGAGTAGGGAAACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAAASPH*SRETGP
Trigger: AGGACCTGTTTCCCTACTGCAGTGAGGAGAGGCCGC...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCAAAGCCTCTTCTACTCTaGGGCTTGCTAGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: RCLPSSWLTQSMVVICSSKPLLL*GLLEDP
Trigger: AGGATCTTCTAGCAAGCCGCAGAGTAGAAGAGGCTT...TGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCCAGGAACTGAAGTTGTaGAAACTGTATAAATCCCGC +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSQELKL*KLYKSR
Trigger: GCGGGATTTATACAGTTTGCACAACTTCAGTTCCTG...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATTTAAAACTGTTCTTCTaGTGTTCATCCAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDLKLFF*CSSKGL
Trigger: GAGACCTTTGGATGAACAGCAGAAGAACAGTTTTAA...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGAGCATGGTGGTCATCTaGTCTTCATGTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPSMVVI*SSCPAG
Trigger: GCCTGCTGGACATGAAGAGCAGATGACCACCATGCT...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTAAGCCACGTTTCCAGTaGAAACATGAGTCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPKPRFQ*KHESKG
Trigger: ACCTTTAGACTCATGTTTGCACTGGAAACGTGGCTT...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATGCAGCCACCTGCCTGTaGTCCGGAAGTGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHAATCL*SGSEKH
Trigger: GTGCTTCTCACTTCCGGAGCACAGGCAGGTGGCTGC...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGAAGGGCTGCCCCAGTTaGATCATGGGCATCCATTCA +
Preference number: 4 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPKGCPS*IMGIHS
Trigger: TGAATGGATGCCCATGATGCAACTGGGGCAGCCCTT...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTAAACTCCTTTACTTGTaGCAACGATCACTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RSPCCVWTEGSLAPRCLPKLLYL*QRSLFL
Trigger: AAGGAAGAGTGATCGTTGCCACAAGTAAAGGAGTTT...AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAACTCCTTTACTTGTaGCAACGATCACTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWAKLLYL*QRSLFL
Trigger: AAGGAAGAGTGATCGTTGCCACAAGTAAAGGAGTTT...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGGGAAGCGTTTGCACTTaGCCATCTTCTCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKGSVCT*PSSPGP
Trigger: GGGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCC...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCCTCTCGAGAAGAAAGTaGACTCGGTATAAATCAGAT +
Preference number: 4 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWALSRRK*TRYKSD
Trigger: ATCTGATTTATACCGAGTCCACTTTCTTCTCGAGAG...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTTTTTGTCTGAGAGTTaGATTGAGCTTCCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMFLSES*IELPFN
Trigger: GTTGAAAGGAAGCTCAATCCAACTCTCAGACAAAAA...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTCGTTCACGGGCTTCTTaGAGCCCAAGTGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TESPTGKTHDWALSSHQFRSRAS*SPSVSA
Trigger: TGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACG...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCTTAGCTTCCAGGAACTaGAGTTGTGCAAACTGTATA +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLLASRN*SCANCI
Trigger: TATACAGTTTGCACAACTTCAGTTCCTGGAAGCTAA...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCATGTACCTGGACAGGTaGACTCTTGTATGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSMYLDR*TLVCFC
Trigger: ACAGAAACATACAAGAGTTCACCTGTCCAGGTACAT...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCAGCAACGCAGCCTGAGTaGCATCCCTACATTAATACT +
Preference number: 4 (lower is better)
Translates to: RQPEALVHPRVSAWVHKAATQPE*HPYINT
Trigger: AGTATTAATGTAGGGATGTCACTCAGGCTGCGTTGC...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCACAGGAACTGAAGTTGTaGAAACTGTATAAATCCCGC +
Preference number: 4 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPQELKL*KLYKSR
Trigger: GCGGGATTTATACAGTTTGCACAACTTCAGTTCCTG...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCTTAAAACTGTTCTTCTaGTGTTCATCCAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGLKLFF*CSSKGL
Trigger: GAGACCTTTGGATGAACAGCAGAAGAACAGTTTTAA...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATGCCGCTGCAAAGTCCTaGAGCTCGTGCACCAGGATA +
Preference number: 4 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHAAAKS*SSCTRI
Trigger: TATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGC...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATAATGGGCAGAGGAGCTaGACTGACCAGGTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHNGQRS*TDQVSG
Trigger: GCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATT...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGGAGCGTGTGGAGTCCTaGACATCGCCATTCACAATG +
Preference number: 4 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKERVES*TSPFTM
Trigger: CATTGTGAATGGCGATGTCCAGGACTCCACACGCTC...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCACAGGTCTGAGCGTGTaGAGTCCTGGACATCGCCAT +
Preference number: 4 (lower is better)
Translates to: GLMDLIALFDGTVTNQQATGLSV*SPGHRH
Trigger: ATGGCGATGTCCAGGACTCCACACGCTCAGACCTGT...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATATAAATCAGATTTCTaGAGCAGCCGCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASYKSDF*SSRRSL
Trigger: CAAGCTGCGGCGGCTGCTCCAGAAATCTGATTTATA...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTATAAATCAGATTTCTaGAGCAGCCGCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNYKSDF*SSRRSL
Trigger: CAAGCTGCGGCGGCTGCTCCAGAAATCTGATTTATA...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCTCAAATTCGGTGGCGTaGCGGTTCAGCAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPSNSVA*RFSRST
Trigger: CGTGGACCTGCTGAACCGCCACGCCACCGAATTTGA...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTCTCCCTTCGTCCTaGCTGACACAGAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GLMDLIALFDGTVTNQQACLPSS*LTQSMV
Trigger: CACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGTACATTCATAGAGCCTaGTCAGCAGCGAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPYIHRA*SAARSP
Trigger: AGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTA...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCGGATTACTATGTACCTaGACAGGTGAACTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSGLLCT*TGELLY
Trigger: ATACAAGAGTTCACCTGTCCAGGTACATAGTAATCC...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCCATGAGTCTAAAGGTTaGAGTGTGGGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAHESKG*SVGVVG
Trigger: CCCCACCACCCCCACACTCCAACCTTTAGACTCATG...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCCCCCCAAACAACACATaGATGTTTTTGCTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSPPNNT*MFLLLD
Trigger: GTCAAGAAGCAAAAACATCCATGTGTTGTTTGGGGG...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp ATGTACATTCATAGAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGAACAAACAGGACAGATaGCTCTCTCAACAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: MYIHRAWSAARSPCCVWTNKQDR*LSQQES
Trigger: GCTCTCTTGTTGAGAGAGTCATCTGTCCTGTTTGTT...CGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCACTCAGAAATATGATTTaGGAAAAGGGCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PSSWLTQSMVVICSSCPALRNMI*EKGLVG
Trigger: TCCTACAAGGCCCTTTTCTCAAATCATATTTCTGAG...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTCAGCTGGTTCAGGTCTaGGTACTCATGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TESPTGKTHDWALSSHQFQLVQV*VLMKRR
Trigger: CCTCCTCTTCATGAGTACGCAGACCTGAACCAGCTG...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTATAGAGCAGTCCAAGTaGAAAATACTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSIEQSK*KILFVL
Trigger: AAGCACAAAAAGTATTTTGCACTTGGACTGCTCTAT...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCACTGAGTTCAGTTCATaGTGTTTTAACCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLTEFSS*CFNQNG
Trigger: ACCATTCTGGTTAAAACAGCATGAACTGAACTCAGT...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTAGCATCTGCAGCACCTaGGCTGCATCAAATTCGGTG +
Preference number: 4 (lower is better)
Translates to: TESPTGKTHDWALSSHQFSICST*AASNSV
Trigger: CACCGAATTTGATGCAGCCCAGGTGCTGCAGATGCT...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCTTTTTGTCTGAGAGTTaGATTGAGCTTCCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLFLSES*IELPFN
Trigger: GTTGAAAGGAAGCTCAATCCAACTCTCAGACAAAAA...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATTTCCCCTCGCACCCTTaGGCCAAGCTTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHFPSHP*AKLFKS
Trigger: GGACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAA...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTCAAGGCAGAATCTTTTaGGAGCTGAGAGCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: TESPTGKTHDWALSSHQFQGRIF*ELRAGE
Trigger: CTCTCCGGCTCTCAGCTCCCAAAAGATTCTGCCTTG...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACGGTAAAACACATGACTaGGCTTTGAGCTCACACCAA +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNGKTHD*ALSSHQ
Trigger: TTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACC...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTAATTGCTCTATTCGATaGCACAGTTACAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPNCSIR*HSYKSA
Trigger: TGCTGATTTGTAACTGTGCCATCGAATAGAGCAATT...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCATTTCTCTCAGAAATATaGTTTGAGAAAAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PSSWLTQSMVVICSSCPAFLSEI*FEKRAL
Trigger: CAAGGCCCTTTTCTCAAATCATATTTCTGAGAGAAA...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACGCAAAATACTTTTTGTaGTTCTCTAGCCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNAKYFL*FSSQAA
Trigger: TGCTGCCTGGCTAGAGAAGCACAAAAAGTATTTTGC...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTGTGGTGAAGGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTGTAGTCCTCGGCCGCTaGAAAGTCCTGCAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: LVVKDLVEMENCSTLIPIVVLGR*KVLQLV
Trigger: CACGAGCTGCAGGACTTTGCAGCGGCCGAGGACTAC...AATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAACACAGCTGGGCCCTTaGCCGCCGTGGGTTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGTQLGP*PPWVSR
Trigger: ACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGT...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCTCTCGAGAAGAAAGTaGACTCGGTATAAATCAGAT +
Preference number: 4 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCLSRRK*TRYKSD
Trigger: ATCTGATTTATACCGAGTCCACTTTCTTCTCGAGAG...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCACTCTCGAGAAGAAAGTaGACTCGGTATAAATCAGAT +
Preference number: 4 (lower is better)
Translates to: RCLPSSWLTQSMVVICSSLSRRK*TRYKSD
Trigger: ATCTGATTTATACCGAGTCCACTTTCTTCTCGAGAG...TGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAAAGAGTTGCTGGCGGTaGGGTGGGTCTCGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGKSCWR*GGSRPS
Trigger: CGAGGGCCGAGACCCACCCCACCGCCAGCAACTCTT...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAAAAGGAGCACACAGCTaGGCCCTTGCCCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGKGAHS*ALARRG
Trigger: CCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTT...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp ATGTACATTCATAGAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGCCCCCAAACAACACATaGATGTTTTTGCTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: MYIHRAWSAARSPCCVWTPPNNT*MFLLLD
Trigger: GTCAAGAAGCAAAAACATCCATGTGTTGTTTGGGGG...CGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATGAATCTTTTGGGAGCTaGGAGCCGGAGAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHESFGS*EPERKK
Trigger: TTTCTTCCTCTCCGGCTCTCAGCTCCCAAAAGATTC...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTACATATGCAGTAATATaGCCATTCTACAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCTYAVI*PFYNRV
Trigger: GACTCTGTTGTAGAATGGTCATATTACTGCATATGT...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGCAGGAACTGAAGTTGTaGAAACTGTATAAATCCCGC +
Preference number: 4 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPQELKL*KLYKSR
Trigger: GCGGGATTTATACAGTTTGCACAACTTCAGTTCCTG...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGCACCCACAACTGAACTaGAGCAGCATCTTGGTTATT +
Preference number: 4 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKHPQLN*SSILVI
Trigger: AATAACCAAGATGCTGCTGCAGTTCAGTTGTGGGTG...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCTTAAAACTGTTCTTCTaGTGTTCATCCAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: WSSALHVQQAQKELGVPLLKLFF*CSSKGL
Trigger: GAGACCTTTGGATGAACAGCAGAAGAACAGTTTTAA...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATCTGATGGATCTAATTaGTCTATTCGATGGCACAGT +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASSDGSN*SIRWHS
Trigger: ACTGTGCCATCGAATAGAGCAATTAGATCCATCAGA...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCAAAACTCCTTTACTTGTaGCAACGATCACTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASKLLYL*QRSLFL
Trigger: AAGGAAGAGTGATCGTTGCCACAAGTAAAGGAGTTT...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGTACATTCATAGAGCCTaGTCATTCCATGTACATTCA +
Preference number: 4 (lower is better)
Translates to: ADTEHGGHLLFMSSRLRKYIHRA*SFHVHS
Trigger: TGAATGTACATGGAATGACCAGGCTCTATGAATGTA...CTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGAAATCAGCAGGCCTGTaGGAAAGAACCATACATTTC +
Preference number: 4 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKKSAGL*ERTIHF
Trigger: GAAATGTATGGTTCTTTCTCACAGGCCTGCTGATTT...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGATAAATCCCGCCTGCTaGAGAATCCTTCTGTACATT +
Preference number: 4 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKINPAC*RILLYI
Trigger: AATGTACAGAAGGATTCTGCAGCAGGCGGGATTTAT...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCAACTGAGTTCAGTTCATaGTGTTTTAACCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: QRFLWESKQKARAAPVASTEFSS*CFNQNG
Trigger: ACCATTCTGGTTAAAACAGCATGAACTGAACTCAGT...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp CTTGTGGTGAAGGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTCTGCATCAAATTCGGTaGCGTGGCGGTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVVKDLVEMENCSTLIPILHQIR*RGGSAG
Trigger: ACCTGCTGAACCGCCACGCCACCGAATTTGATGCAG...AATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp CTTGTGGTGAAGGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTGTATTCATACAGGTCTaGGCGTGTGGAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LVVKDLVEMENCSTLIPIVFIQV*ACGVLD
Trigger: GTCCAGGACTCCACACGCTCAGACCTGTATGAATAC...AATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCAAATCAGCAGGCCTGTaGGAAAGAACCATACATTTC +
Preference number: 4 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAKSAGL*ERTIHF
Trigger: GAAATGTATGGTTCTTTCTCACAGGCCTGCTGATTT...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTGCAAAATACTTTTTGTaGTTCTCTAGCCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TESPTGKTHDWALSSHQFAKYFL*FSSQAA
Trigger: TGCTGCCTGGCTAGAGAAGCACAAAAAGTATTTTGC...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp CTTGTGGTGAAGGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTCTTTTCAAGTCCGAGTaGCAGGACTGGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVVKDLVEMENCSTLIPILFKSE*QDWMSW
Trigger: CCAGCTCATCCAGTCCTGGCACTCGGACTTGAAAAG...AATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTTTTCAAATCAGCAGATaGCATGACAGGAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TESPTGKTHDWALSSHQFFQISR*HDRKGA
Trigger: TGCTCCTTTCCTGTCATGGCATCTGCTGATTTGAAA...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCCTGAAATTTTTCCTTTaGAATGTTCCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPLKFFL*NVPPGS
Trigger: GGAGCCCGGAGGAACATTCCAAAGGAAAAATTTCAG...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAGGTTTGTGTGTCTGCTaGCGGCACAGTGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGGLCVC*RHSGCA
Trigger: TGCACACCCACTGTGCCGCCAGCAGACACACAAACC...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCGGATTTTGGCATATCTaGCAAAGCTTTTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAGFWHI*QSFLSE
Trigger: CTCAGACAAAAAGCTTTGTCAGATATGCCAAAATCC...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAACAGGTCTGAGCGTGTaGAGTCCTGGACATCGCCAT +
Preference number: 4 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGTGLSV*SPGHRH
Trigger: ATGGCGATGTCCAGGACTCCACACGCTCAGACCTGT...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCTACATTTTGTGTATCTaGGACCCAATCGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPYILCI*DPIGTK
Trigger: CTTTGTCCCGATTGGGTCCCAGATACACAAAATGTA...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGACGTCATCGAGCGCTATaGCGTATGGAAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGRHRAL*RMERTQ
Trigger: CTGTGTCCTTTCCATACGTCATAGCGCTCGATGACG...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTTACATTCATAGAGCCTaGTCATTCCATGTACATTCA +
Preference number: 4 (lower is better)
Translates to: TESPTGKTHDWALSSHQFYIHRA*SFHVHS
Trigger: TGAATGTACATGGAATGACCAGGCTCTATGAATGTA...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCTTTCTCTCAGAAATATaGTTTGAGAAAAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPFLSEI*FEKRAL
Trigger: CAAGGCCCTTTTCTCAAATCATATTTCTGAGAGAAA...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR TCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGACACATGACTGGGCTTTaGGCTCACACCAATTTACAC +
Preference number: 4 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGHMTGL*AHTNLH
Trigger: GTGTAAATTGGTGTGAGCTCAAAGCCCAGTCATGTG...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
3UTR CAA 72 bp TCATACTGTAATAGAATGCTGCTTGTGGTGAAGGATTaGGTAGAGATGGAAAACTGCTCAACTTTAATTCCC +
Preference number: 4 (lower is better)
Translates to: SYCNRMLLVVKD*VEMENCSTLIP
Trigger: GGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAGCAGCATTCTATTACAGTATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR GCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGATCTGATGGATCTAATTaGTCTATTCGATGGCACAGT +
Preference number: 4 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGSDGSN*SIRWHS
Trigger: ACTGTGCCATCGAATAGAGCAATTAGATCCATCAGA...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CCA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGAGGATTACTATGTACCTaGACAGGTGAACTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGGLLCT*TGELLY
Trigger: ATACAAGAGTTCACCTGTCCAGGTACATAGTAATCC...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS TCA 90 bp GCAGAGACAAGCGTAAAGGCTTTGATGCTCATCATGTCTACTGGCTaGTCTGCGGCGCCGGCGCCCGCCGTCCCGCGCCGCCCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: AETSVKALMLIMSTG*SAAPAPAVPRRPAA
Trigger: GGCCGCGGGGCGGCGCGGGACGGCGGGCGCCGGCGCCGCAGATCAGCCAGTAGACATGATGAGCATCAAAGCCTTTACGCTTGTCTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393359.7
CDS-3UTR CAA 90 bp GAAAGGAGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCAGCACCAGCAGCCTGTaGAGTGCTGAGGCCGCACGC +
Preference number: 5 (lower is better)
Translates to: ERSTQLGPCPPWVSRVRGSTSSL*SAEAAR
Trigger: GCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGCT...GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp GCCGCAGCTTGGCCTGCGTCTCGGTGGCCTCTGCACCCTTGCCACTaGCGGAGGCCCTCTGCAGCAGCACCTCTTCCAGGTACAGCACAG +
Preference number: 5 (lower is better)
Translates to: AAAWPASRWPLHPCH*RRPSAAAPLPGTAQ
Trigger: CTGTGCTGTACCTGGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGCTGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp ACAGCCGCCCCAATCACATTCTCCGACCAGTGCACGGGGGCGCGCTaGGATATCCCTGCGACTGTGGCAAACATGCCCAGCCCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: TAAPITFSDQCTGAR*DIPATVANMPSPPG
Trigger: CCCCGGAGGGCTGGGCATGTTTGCCACAGTCGCAGGGATATCCCAGCGCGCCCCCGTGCACTGGTCGGAGAATGTGATTGGGGCGGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp CAGGTAGATGGCCAGCAGCGTGTGAAAGAGTTGCTGGCGGTGGGGTaGGTCTCGGCCCTCGGAGCACCACAGGCAGTAGTCCTCGGCCGC +
Preference number: 5 (lower is better)
Translates to: QVDGQQRVKELLAVG*VSALGAPQAVVLGR
Trigger: GCGGCCGAGGACTACTGCCTGTGGTGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAACTCTTTCACACGCTGCTGGCCATCTACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCTGGATGAGCTGGGGTTaGTGTGTCTGCTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: AIQEATPPSSTRALPPAVWMSWG*CVCWRH
Trigger: GTGCCGCCAGCAGACACACAAACCCCAGCTCATCCA...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCACACACAGCTGGGCCCTaGCCCGCCGTGGGTTTCCCG +
Preference number: 5 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPHTAGP*PAVGFP
Trigger: CGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTG...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp AGAGCCAGACACAGGAAGTGGCCGTCCACAGCCACAGCGAGGGGCTaGTCGGCAGTCGACACCTCCTTGACGATCTGCACCCGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: RARHRKWPSTATARG*SAVDTSLTICTRSS
Trigger: CGAGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGCTGTGGACGGCCACTTCCTGTGTCTGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp TGCACCAGGATATGCAGCGCCTTCTCATGCTCGCCCAGCTTCCCGTaGAGGATGGCGCTCTCCATGGGCAGGCCAGCTCCCTGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: CTRICSAFSCSPSFP*RMALSMGRPAPCSL
Trigger: GAGGCTGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCATATCCTGGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp AATCAGATTTCTGGAGCAGCCGCCGCAGCTTGGCCTGCGTCTCGGTaGCCTCTGCACCCTTGCCACTGGCGGAGGCCCTCTGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: NQISGAAAAAWPASR*PLHPCHWRRPSAAA
Trigger: TGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCGGCTGCTCCAGAAATCTGATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp GGCGGTTCAGCAGGTCCACGGCAGCCACGGCCAGCTCGTGGGCAGTaGGGCCAGCATGCAGGTAGATGGCCAGCAGCGTGTGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: GGSAGPRQPRPARGQ*GQHAGRWPAACERV
Trigger: AACTCTTTCACACGCTGCTGGCCATCTACCTGCATGCTGGCCCCACTGCCCACGAGCTGGCCGTGGCTGCCGTGGACCTGCTGAACCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp TCAGGCAGCATCTGCAGCACCTGGGCTGCATCAAATTCGGTGGCGTaGCGGTTCAGCAGGTCCACGGCAGCCACGGCCAGCTCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: SGSICSTWAASNSVA*RFSRSTAATASSWA
Trigger: TGCCCACGAGCTGGCCGTGGCTGCCGTGGACCTGCTGAACCGCCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAGATGCTGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 90 bp TGCCCACGTAGAGGTCCCTGCCGCAGCACTCCACGCACTCTATGTTaGCGCGCTCCTTGTCGCCCATCAGCAGCTCCCGCTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: CPRRGPCRSTPRTLC*RAPCRPSAAPAPQQ
Trigger: CTGCTGTGGAGCGGGAGCTGCTGATGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp TGGGTCTCGGCCCTCGGAGCACCACAGGCAGTAGTCCTCGGCCGCTaGAAAGTCCTGCAGCTCGTGCACCAGGATATGCAGCGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: WVSALGAPQAVVLGR*KVLQLVHQDMQRLL
Trigger: GAGAAGGCGCTGCATATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGCCGAGGACTACTGCCTGTGGTGCTCCGAGGGCCGAGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp GGATATGCAGCGCCTTCTCATGCTCGCCCAGCTTCCCGTGCAGGATaGCGCTCTCCATGGGCAGGCCAGCTCCCTGCAGCCTCTCGAGAA +
Preference number: 5 (lower is better)
Translates to: GYAAPSHARPASRAG*RSPWAGQLPAASRE
Trigger: TTCTCGAGAGGCTGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCATATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp AGGTGTCAGGCAGCATCTGCAGCACCTGGGCTGCATCAAATTCGGTaGCGTGGCGGTTCAGCAGGTCCACGGCAGCCACGGCCAGCTCGT +
Preference number: 5 (lower is better)
Translates to: RCQAASAAPGLHQIR*RGGSAGPRQPRPAR
Trigger: ACGAGCTGGCCGTGGCTGCCGTGGACCTGCTGAACCGCCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAGATGCTGCCTGACACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCTGTCTCTGCAGCTGTTaGGTGGCAGTGAACGTGGCT +
Preference number: 5 (lower is better)
Translates to: AIQEATPPSSTRALPPAVCLCSC*VAVNVA
Trigger: AGCCACGTTCACTGCCACCAAACAGCTGCAGAGACA...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTAACGTGGCTGCCCCCTaGATGCGGGCCCCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSNVAAP*MRAPEG
Trigger: GCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACGTT...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAGCAGCGAGGAGTCCTaGTTGCGTATGGACGGAAGG +
Preference number: 5 (lower is better)
Translates to: STQLGPCPPWVSRVRGFFSSEES*LRMDGR
Trigger: CCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT...GAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp ACTCGGTATAAATCAGATTTCTGGAGCAGCCGCCGCAGCTTGGCCTaGGTCTCGGTGGCCTCTGCACCCTTGCCACTGGCGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: TRYKSDFWSSRRSLA*VSVASAPLPLAEAL
Trigger: GAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCGGCTGCTCCAGAAATCTGATTTATACCGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp GCAAAGTCCTGCAGCTCGTGCACCAGGATATGCAGCGCCTTCTCATaGTCGCCCAGCTTCCCGTGCAGGATGGCGCTCTCCATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: AKSCSSCTRICSAFS*SPSFPCRMALSMGR
Trigger: CCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGAGCTGCAGGACTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp CCTTCTCATGCTCGCCCAGCTTCCCGTGCAGGATGGCGCTCTCCATaGGCAGGCCAGCTCCCTGCAGCCTCTCGAGAAGAAAGTGGACTC +
Preference number: 5 (lower is better)
Translates to: PSHARPASRAGWRSP*AGQLPAASREESGL
Trigger: GAGTCCACTTTCTTCTCGAGAGGCTGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGCAGTCGACACCTCCTaGACGATCTGCACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: ARAAPVASWASIQSWDPAAVDTS*TICTRS
Trigger: GGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGC...TGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCGTGGCCTCTGCACCCTaGCCACTGGCGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSVASAP*PLAEAL
Trigger: GAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCAC...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 90 bp CGTCCACAGCCACAGCGAGGGGCTGCTCGGCAGTCGACACCTCCTTaGCGATCTGCACCCGGTCCTCGTACACCAGAAACATCTGGATGG +
Preference number: 5 (lower is better)
Translates to: RPQPQRGAARQSTPP*RSAPGPRTPETSGW
Trigger: CCATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGCTGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp GCCGCACGCAGCTCGTTCACGGGCTTCTTGAAGCCCAAGTGTCTCTaGAGCTGTTTGGTGGCAGTGAACGTGGCTGGCCCAGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: AARSSFTGFLKPKCL*SCLVAVNVAGPAGT
Trigger: AGTGCCTGCTGGGCCAGCCACGTTCACTGCCACCAAACAGCTGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGAGCTGCGTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp TGGATGCTGTCCCTCATGGCCCCCATCAGGAATGGGCAGAGGAGCTaGACTGACCAGGTGTCAGGCAGCATCTGCAGCACCTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: WMLSLMAPIRNGQRS*TDQVSGSICSTWAA
Trigger: TGCAGCCCAGGTGCTGCAGATGCTGCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATTCCTGATGGGGGCCATGAGGGACAGCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp AGTGGACTCGGTATAAATCAGATTTCTGGAGCAGCCGCCGCAGCTTaGCCTGCGTCTCGGTGGCCTCTGCACCCTTGCCACTGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: SGLGINQISGAAAAA*PASRWPLHPCHWRR
Trigger: CCTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCGGCTGCTCCAGAAATCTGATTTATACCGAGTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAATGTTGACGCGCTCCTaGTCGCCCATCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPMLTRS*SPISSS
Trigger: GGAGCTGCTGATGGGCGACAAGGAGCGCGTCAACAT...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCAGCACCAGCAGCCTGTaGAGTGCTGAGGCCGCACGC +
Preference number: 5 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVSTSSL*SAEAAR
Trigger: GCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGCT...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCAAACGTGGCTGCCCCCTaGATGCGGGCCCCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPNVAAP*MRAPEG
Trigger: GCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACGTT...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCCAGCGTGTGAAAGAGTaGCTGGCGGTGGGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSQRVKE*LAVGWV
Trigger: GACCCACCCCACCGCCAGCAACTCTTTCACACGCTG...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp GCCACAGCGAGGGGCTGCTCGGCAGTCGACACCTCCTTGACGATCTaGACCCGGTCCTCGTACACCAGAAACATCTGGATGGTTCTGCGT +
Preference number: 5 (lower is better)
Translates to: ATARGCSAVDTSLTI*TRSSYTRNIWMVLR
Trigger: ACGCAGAACCATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp AGGAATGGGCAGAGGAGCTGCACTGACCAGGTGTCAGGCAGCATCTaGAGCACCTGGGCTGCATCAAATTCGGTGGCGTGGCGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RNGQRSCTDQVSGSI*STWAASNSVAWRFS
Trigger: GCTGAACCGCCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAGATGCTGCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp GCACTGGCCTCTCCTCCAACAGGAAGTGGTAGACGAAGCAGTCGTTaGTGCCCACGTAGAGGTCCCTGCCGCAGCACTCCACGCACTCTA +
Preference number: 5 (lower is better)
Translates to: ALASPPTGSGRRSSR*CPRRGPCRSTPRTL
Trigger: TAGAGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGGGCACCAACGACTGCTTCGTCTACCACTTCCTGTTGGAGGAGAGGCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp CAGTGCAAACGTGGCTGCCCCCTTGATGCGGGCCCCCGAAGGCACTaGCTCGAGGTTCAGCATGTTGACCAGGCTGATGGAGTTGTCACA +
Preference number: 5 (lower is better)
Translates to: QCKRGCPLDAGPRRH*LEVQHVDQADGVVT
Trigger: TGTGACAACTCCATCAGCCTGGTCAACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACGTTTGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GAAAGGAGCACACAGCTGGGCCCTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCCCTGAAATTTTTCCTTaGGAATGTTCCTCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: ERSTQLGPCPPWVSRVRGPEIFP*ECSSGL
Trigger: GAGCCCGGAGGAACATTCCAAAGGAAAAATTTCAGG...GCCGCGGACACGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTGCTCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp CTGGCCTCTCCTCCAACAGGAAGTGGTAGACGAAGCAGTCGTTGGTaGCCACGTAGAGGTCCCTGCCGCAGCACTCCACGCACTCTATGT +
Preference number: 5 (lower is better)
Translates to: LASPPTGSGRRSSRW*PRRGPCRSTPRTLC
Trigger: ACATAGAGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGGGCACCAACGACTGCTTCGTCTACCACTTCCTGTTGGAGGAGAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp ACGTATGGAAAGGACACAGCCGCCCCAATCACATTCTCCGACCAGTaGACGGGGGCGCGCTGGGATATCCCTGCGACTGTGGCAAACATG +
Preference number: 5 (lower is better)
Translates to: TYGKDTAAPITFSDQ*TGARWDIPATVANM
Trigger: CATGTTTGCCACAGTCGCAGGGATATCCCAGCGCGCCCCCGTGCACTGGTCGGAGAATGTGATTGGGGCGGCTGTGTCCTTTCCATACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGACCAGGCTGATGGAGTaGTCACACAGCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMTRLME*SHSTSS
Trigger: GCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGT...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCAAACGTGGCTGCCCCCTaGATGCGGGCCCCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: QRFLWESKQKARAAPVASNVAAP*MRAPEG
Trigger: GCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACGTT...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTGCAGTCGACACCTCCTaGACGATCTGCACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPAVDTS*TICTRS
Trigger: GGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGC...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCCTTCTACTCTGCGGCTaGCTAGAAGATCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: AIQEATPPSSTRALPPAVLLLCG*LEDPVF
Trigger: AAATACAGGATCTTCTAGCAAGCCGCAGAGTAGAAG...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCAGTGGCCTCTGCACCCTaGCCACTGGCGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: RQPEALVHPRVSAWVHKAVASAP*PLAEAL
Trigger: GAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCAC...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCGTTCCCCTCGCACCCTaGGGCCAAGCTTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSVPLAP*GQAFQV
Trigger: GACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAAC...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGAGCAGCGAGGAGTCCTaGTTGCGTATGGACGGAAGG +
Preference number: 5 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMSSEES*LRMDGR
Trigger: CCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGGTGTGCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCATTCAGGGTCCTCTCTaGTCATATGTACAAGCTGAC +
Preference number: 5 (lower is better)
Translates to: GCAIQEATPPSSTRALPPIQGPL*SYVQAD
Trigger: GTCAGCTTGTACATATGACAAGAGAGGACCCTGAAT...GGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCAAGGGCTGCCCCAGTaGCATCATGGGCATCCATTC +
Preference number: 5 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLQGLPQ*HHGHPF
Trigger: GAATGGATGCCCATGATGCAACTGGGGCAGCCCTTG...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCCAAGGGCTGCCCCAGTaGCATCATGGGCATCCATTC +
Preference number: 5 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSQGLPQ*HHGHPF
Trigger: GAATGGATGCCCATGATGCAACTGGGGCAGCCCTTG...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS TCA 90 bp GCTGGTTCAGGTCTGCGTACTCATGAAGAGGAGGGTGGGACCGGGTaGAGGAGGAGGAGGTGGGCAACAGGAAGGGGTAGAGAGAGATCA +
Preference number: 5 (lower is better)
Translates to: AGSGLRTHEEEGGTG*RRRRWATGRGRERS
Trigger: TGATCTCTCTCTACCCCTTCCTGTTGCCCACCTCCTCCTCCTTCACCCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCTGAACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTATGTTGACGCGCTCCTaGTCGCCCATCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPMLTRS*SPISSS
Trigger: GGAGCTGCTGATGGGCGACAAGGAGCGCGTCAACAT...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGCAGTCGACACCTCCTaGACGATCTGCACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: PSSWLTQSMVVICSSCPAAVDTS*TICTRS
Trigger: GGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGC...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCACAGCGTCTGCTTCTGTaGCTGATCCAACATGCTGTG +
Preference number: 5 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPQRLLL*LIQHAV
Trigger: CACAGCATGTTGGATCAGCAACAGAAGCAGACGCTG...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGCCTCCTTGTAGCCATTaGCTACCTCTGTGCTGCGGA +
Preference number: 5 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMPPCSH*LPLCCG
Trigger: TCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAGG...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGCCACCTGCCTGTCCTCCTTGTAGCCATTaGCTACCTCTGTGCTGCGGA +
Preference number: 5 (lower is better)
Translates to: QLHHGHPFRAGTPQPPACPPCSH*LPLCCG
Trigger: TCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAGG...ACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCACAGCGTGTGAAAGAGTaGCTGGCGGTGGGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: PSSWLTQSMVVICSSCPAQRVKE*LAVGWV
Trigger: GACCCACCCCACCGCCAGCAACTCTTTCACACGCTG...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTGTGAGAGCGTCGCAGTaGAACTCAGCCCAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLVRASQ*NSAQCN
Trigger: GTTGCACTGGGCTGAGTTCAACTGCGACGCTCTCAC...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCGGACAAAGGATAAAGTaGCAAGGACAAAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: AIQEATPPSSTRALPPAVGQRIK*QGQRFL
Trigger: CAGAAACCTTTGTCCTTGCAACTTTATCCTTTGTCC...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS TCA 90 bp AGCCATTTGCTACCTCTGTGCTGCGGACCTCGTTCAGGTAGCTCATaGGGAAGCGTTTGCACTTGGCCATCTTCTCCTGGTCCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SHLLPLCCGPRSGSS*GSVCTWPSSPGPPG
Trigger: CCCAGGGGGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAAATGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp ATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTaGGCCAAGCTTTTCAAGTCCGAGTGCCAGGACTGGATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: MSSRLRKNSEFPSHP*AKLFKSECQDWMSW
Trigger: CCAGCTCATCCAGTCCTGGCACTCGGACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCTCCACGCACTCTATGTaGACGCGCTCCTTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSSTHSM*TRSLSP
Trigger: GGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGA...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTTCACGGGCTTCTaGAAGCCCAAGTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: RSPCCVWTEGSLAPRCLPSFTGF*KPKCLC
Trigger: GCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGA...AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCTCGTTCACGGGCTTCTaGAAGCCCAAGTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWASFTGF*KPKCLC
Trigger: GCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGA...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCTCGTTCACGGGCTTCTaGAAGCCCAAGTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LHVQQAQKELGVPLAPLGSFTGF*KPKCLC
Trigger: GCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGA...GCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGTGGATGGTTCTGCGTTaGACAGAGATGATGCAAACT +
Preference number: 5 (lower is better)
Translates to: LARRGFPVSAASSRRGEQWMVLR*TEMMQT
Trigger: AGTTTGCATCATCTCTGTCAAACGCAGAACCATCCA...CTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCATGTCTCCCTATCCTCTaGACGATCGGCGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PSSWLTQSMVVICSSCPACLPIL*TIGGLS
Trigger: GGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGACA...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCTGTCTCCCTATCCTCTaGACGATCGGCGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSCLPIL*TIGGLS
Trigger: GGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGACA...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCAGGAAGCGTTTGCACTaGGCCATCTTCTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVRKRLH*AIFSWS
Trigger: GGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCCT...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGCTCATGAGGAAGCGTTaGCACTTGGCCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SSEESLLRMDGRLPGTQMLMRKR*HLAIFS
Trigger: GGAGAAGATGGCCAAGTGCAAACGCTTCCTCATGAG...CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCTGGATGAGCTGGGGTTaGTGTGTCTGCTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSWMSWG*CVCWRH
Trigger: GTGCCGCCAGCAGACACACAAACCCCAGCTCATCCA...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCGTTCCCCTCGCACCCTaGGGCCAAGCTTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: PFVLADTEHGGHLLFMSSVPLAP*GQAFQV
Trigger: GACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAAC...GCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCGTTCCCCTCGCACCCTaGGGCCAAGCTTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLVPLAP*GQAFQV
Trigger: GACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAAC...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGCGAGGAGTCCTTGTaGCGTATGGACGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLSEESL*RMDGRL
Trigger: GAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGGGATGTTTTTGCTTCTaGACCCACTTAGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: LARRGFPVSAASSRRGEQGCFCF*THLESQ
Trigger: TTGGGACTCTAAGTGGGTCAAGAAGCAAAAACATCC...CTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCCATCCAGGAGGCGACACCCCCATCCAGCACACGGGCCCTTCCACCCGCTGTCTTACACAGCATACAGTaGTGCTACAAGGAGAATTTC +
Preference number: 5 (lower is better)
Translates to: AIQEATPPSSTRALPPAVLHSIQ*CYKENF
Trigger: GAAATTCTCCTTGTAGCACAACTGTATGCTGTGTAA...GACAGCGGGTGGAAGGGCCCGTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS TCA 90 bp TCTCTAGCCAGGCAGCACTGTCCGTCAGAAGACAGAAGTTCTCAGTaGCCAGGAGGTCCAGCAGGCTGTCGTGGTCAGCCTCTGCATACA +
Preference number: 5 (lower is better)
Translates to: SLARQHCPSEDRSSQ*PGGPAGCRGQPLHT
Trigger: TGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTCTTCTGACGGACAGTGCTGCCTGGCTAGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp GTTCTCAGTGACCAGGAGGTCCAGCAGGCTGTCGTGGTCAGCCTCTaGATACAGTTTGAGCAAGGCTGTGTCGATGTCCTCCTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: VLSDQEVQQAVVVSL*IQFEQGCVDVLLVA
Trigger: GGCTACAAGGAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTGGTCACTGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCAACCAGGCTGATGGAGTaGTCACACAGCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPTRLME*SHSTSS
Trigger: GCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGT...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATTCCTCCGGGCTCCTTTaGCTAAAACCAAAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: QQRGVLVAYGRKAPWHPDSSGLL*LKPKPL
Trigger: AAGAGGCTTTGGTTTTAGCAAAAGGAGCCCGGAGGA...ATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCAGGAAGCGTTTGCACTaGGCCATCTTCTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SALHVQQAQKELGVPLAPRKRLH*AIFSWS
Trigger: GGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCCT...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTGCCTCTGCATACAGTTaGAGCAAGGCTGTGTCGATG +
Preference number: 5 (lower is better)
Translates to: RSPCCVWTEGSLAPRCLPASAYS*SKAVSM
Trigger: CATCGACACAGCCTTGCTCAAACTGTATGCAGAGGC...AGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACCAGCGTGTGAAAGAGTaGCTGGCGGTGGGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: DTEHGGHLLFMSSRLRKNQRVKE*LAVGWV
Trigger: GACCCACCCCACCGCCAGCAACTCTTTCACACGCTG...GTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGGCAAGAGAGGACTTaGTCGCCAGCCATGGTGAAG +
Preference number: 5 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLRQERT*SPAMVK
Trigger: CTTCACCATGGCTGGCGACAAAGTCCTCTCTTGCCT...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCAGGCAAGAGAGGACTTaGTCGCCAGCCATGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SALHVQQAQKELGVPLAPRQERT*SPAMVK
Trigger: CTTCACCATGGCTGGCGACAAAGTCCTCTCTTGCCT...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS TCA 90 bp CCAGGAGGTCCAGCAGGCTGTCGTGGTCAGCCTCTGCATACAGTTTaGGCAAGGCTGTGTCGATGTCCTCCTTGTAGCCATTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: PGGPAGCRGQPLHTV*ARLCRCPPCSHLLP
Trigger: AGGTAGCAAATGGCTACAAGGAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCATCCACGCACTCTATGTaGACGCGCTCCTTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: RQPEALVHPRVSAWVHKASTHSM*TRSLSP
Trigger: GGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGA...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCTTCTACTCTGCGGCTaGCTAGAAGATCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWLLLCG*LEDPVF
Trigger: AAATACAGGATCTTCTAGCAAGCCGCAGAGTAGAAG...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTTCCTCCGGGCTCCTTTaGCTAAAACCAAAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SEESLLRMDGRLPGTQMSSSGLL*LKPKPL
Trigger: AAGAGGCTTTGGTTTTAGCAAAAGGAGCCCGGAGGA...AGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCCTCATGAGGAAGCGTTaGCACTTGGCCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SALHVQQAQKELGVPLAPLMRKR*HLAIFS
Trigger: GGAGAAGATGGCCAAGTGCAAACGCTTCCTCATGAG...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCCCCAAGAGTGAGTGCTaGGGTACACAAGGCAGAATC +
Preference number: 5 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLPKSEC*GTQGRI
Trigger: GATTCTGCCTTGTGTACCCAAGCACTCACTCTTGGG...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTTGCCCGCCGTGGGTTTCCCGTGTCCGCGGCTTCTTCAAGGAGGGGAGAGCAGTCTCAGAAATATGATTaGAGAAAAGGGCCTTGTAGG +
Preference number: 5 (lower is better)
Translates to: LARRGFPVSAASSRRGEQSQKYD*RKGPCR
Trigger: CCTACAAGGCCCTTTTCTCAAATCATATTTCTGAGA...CTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTGTGAGAGCGTCGCAGTaGAACTCAGCCCAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCVRASQ*NSAQCN
Trigger: GTTGCACTGGGCTGAGTTCAACTGCGACGCTCTCAC...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp AGAAGACAGAAGTTCTCAGTGACCAGGAGGTCCAGCAGGCTGTCGTaGTCAGCCTCTGCATACAGTTTGAGCAAGGCTGTGTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: RRQKFSVTRRSSRLS*SASAYSLSKAVSMS
Trigger: GGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGACAAGCGTAAAGGCTTaGATGCTCATCATGTCTACT +
Preference number: 5 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWTSVKA*MLIMST
Trigger: AGTAGACATGATGAGCATCAAAGCCTTTACGCTTGT...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAACAAGCGTAAAGGCTTaGATGCTCATCATGTCTACT +
Preference number: 5 (lower is better)
Translates to: ARAAPVASWASIQSWDPATSVKA*MLIMST
Trigger: AGTAGACATGATGAGCATCAAAGCCTTTACGCTTGT...TGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGCAGCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCTCTGCAGCTGTTaGGTGGCAGTGAACGTGGCT +
Preference number: 5 (lower is better)
Translates to: RCLPSSWLTQSMVVICSSCLCSC*VAVNVA
Trigger: AGCCACGTTCACTGCCACCAAACAGCTGCAGAGACA...TGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTTGGATGGTTCTGCGTTaGACAGAGATGATGCAAACT +
Preference number: 5 (lower is better)
Translates to: AARSPCCVWTEGSLAPRCWMVLR*TEMMQT
Trigger: AGTTTGCATCATCTCTGTCAAACGCAGAACCATCCA...ACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCACAGCGTCTGCTTCTGTaGCTGATCCAACATGCTGTG +
Preference number: 5 (lower is better)
Translates to: PSSWLTQSMVVICSSCPAQRLLL*LIQHAV
Trigger: CACAGCATGTTGGATCAGCAACAGAAGCAGACGCTG...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCAGGAAGCGTTTGCACTaGGCCATCTTCTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: WSSALHVQQAQKELGVPLRKRLH*AIFSWS
Trigger: GGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCCT...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGTGTCTGAGAGTTGGATaGAGCTTCCTTTCAACTTCA +
Preference number: 5 (lower is better)
Translates to: EPGQQRGVLVAYGRKAPWCLRVG*SFLSTS
Trigger: TGAAGTTGAAAGGAAGCTCAATCCAACTCTCAGACA...CCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp ATGTACATTCATAGAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGAGCGAGGAGTCCTTGTaGCGTATGGACGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: MYIHRAWSAARSPCCVWTSEESL*RMDGRL
Trigger: GAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT...CGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp ATGTACATTCATAGAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGAGCAGCGAGGAGTCCTaGTTGCGTATGGACGGAAGG +
Preference number: 5 (lower is better)
Translates to: MYIHRAWSAARSPCCVWTSSEES*LRMDGR
Trigger: CCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCT...CGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCAACAAGGCAGAATCTTTaGGGAGCTGAGAGCCGGAGA +
Preference number: 5 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPTRQNL*GAESRR
Trigger: TCTCCGGCTCTCAGCTCCCAAAAGATTCTGCCTTGT...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCACCCAAGAGTGAGTGCTaGGGTACACAAGGCAGAATC +
Preference number: 5 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPPKSEC*GTQGRI
Trigger: GATTCTGCCTTGTGTACCCAAGCACTCACTCTTGGG...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp CATGCTGTGGACTGTGATGAATTCGTCATCGAGCGCTATGACGTATaGAAAGGACACAGCCGCCCCAATCACATTCTCCGACCAGTGCAC +
Preference number: 5 (lower is better)
Translates to: HAVDCDEFVIERYDV*KGHSRPNHILRPVH
Trigger: GTGCACTGGTCGGAGAATGTGATTGGGGCGGCTGTGTCCTTTCCATACGTCATAGCGCTCGATGACGAATTCATCACAGTCCACAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATAGCACCAGCAGCCTGTaGAGTGCTGAGGCCGCACGC +
Preference number: 5 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHSTSSL*SAEAAR
Trigger: GCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGCT...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTGTAAACTCCTTTACTaGTGGCAACGATCACTCTTC +
Preference number: 5 (lower is better)
Translates to: CPAGSERTRSSPRTLGPSCKLLY*WQRSLF
Trigger: GAAGAGTGATCGTTGCCACAAGTAAAGGAGTTTACA...GCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCTCCTCCGGGCTCCTTTaGCTAAAACCAAAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSSSGLL*LKPKPL
Trigger: AAGAGGCTTTGGTTTTAGCAAAAGGAGCCCGGAGGA...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCAGCCTCTGCATACAGTTaGAGCAAGGCTGTGTCGATG +
Preference number: 5 (lower is better)
Translates to: SSALHVQQAQKELGVPLAASAYS*SKAVSM
Trigger: CATCGACACAGCCTTGCTCAAACTGTATGCAGAGGC...TGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CAGTTGCATCATGGGCATCCATTCAGAGCTGGGACCCCGCAGCCACCTGCCTGTTCTTTCTGCAGTCTCTaGTCTATCACAAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: QLHHGHPFRAGTPQPPACSFCSL*SITRCS
Trigger: GGAACATCTTGTGATAGACAAGAGACTGCAGAAAGA...ACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCACTCACAAAAGGGATTTaGGCATATCTGACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: GQQRGVLVAYGRKAPWHPLTKGI*AYLTKL
Trigger: AAGCTTTGTCAGATATGCCAAAATCCCTTTTGTGAG...TGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCTCAACAGATCTTCACTaGCTAGGCAGCCAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLSTDLH*LGSQKH
Trigger: ATGCTTCTGGCTGCCTAGCAAGTGAAGATCTGTTGA...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTACACATGACTGGGCTTaGAGCTCACACCAATTTACA +
Preference number: 5 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLTHDWA*SSHQFT
Trigger: TGTAAATTGGTGTGAGCTCAAAGCCCAGTCATGTGT...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCGAGGAGTCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCGGACAAAGGATAAAGTaGCAAGGACAAAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: ARSPCCVWTEGSLAPRCLGQRIK*QGQRFL
Trigger: CAGAAACCTTTGTCCTTGCAACTTTATCCTTTGTCC...GAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCCTTGTTGCGTATGGACGGAAGGCTCCCTGGCACCCAGATGTCTCCCTTCGTCACAAGCGTAAAGGCTTaGATGCTCATCATGTCTACT +
Preference number: 5 (lower is better)
Translates to: SLLRMDGRLPGTQMSPFVTSVKA*MLIMST
Trigger: AGTAGACATGATGAGCATCAAAGCCTTTACGCTTGT...GACGAAGGGAGACATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTTCCACGCACTCTATGTaGACGCGCTCCTTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: TESPTGKTHDWALSSHQFSTHSM*TRSLSP
Trigger: GGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGA...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCTGGATGGTTCTGCGTTaGACAGAGATGATGCAAACT +
Preference number: 5 (lower is better)
Translates to: VLADTEHGGHLLFMSSRLWMVLR*TEMMQT
Trigger: AGTTTGCATCATCTCTGTCAAACGCAGAACCATCCA...GAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCACAGCGTCTGCTTCTGTaGCTGATCCAACATGCTGTG +
Preference number: 5 (lower is better)
Translates to: RQPEALVHPRVSAWVHKAQRLLL*LIQHAV
Trigger: CACAGCATGTTGGATCAGCAACAGAAGCAGACGCTG...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCAAGCTTTGTAAACTCCTTTACTaGTGGCAACGATCACTCTTC +
Preference number: 5 (lower is better)
Translates to: SSRLRKNSEFPSHPWAKLCKLLY*WQRSLF
Trigger: GAAGAGTGATCGTTGCCACAAGTAAAGGAGTTTACA...AAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGGGCCTGTAAACTCCTTTACTaGTGGCAACGATCACTCTTC +
Preference number: 5 (lower is better)
Translates to: FMSSRLRKNSEFPSHPWACKLLY*WQRSLF
Trigger: GAAGAGTGATCGTTGCCACAAGTAAAGGAGTTTACA...GGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CAAAGGTTTCTGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCACTCATGAGGAAGCGTTaGCACTTGGCCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QRFLWESKQKARAAPVASLMRKR*HLAIFS
Trigger: GGAGAAGATGGCCAAGTGCAAACGCTTCCTCATGAG...TGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp ATGTACATTCATAGAGCCTGGTCAGCAGCGAGGAGTCCTTGTTGCGTATGGACGGCCTCTGCATACAGTTaGAGCAAGGCTGTGTCGATG +
Preference number: 5 (lower is better)
Translates to: MYIHRAWSAARSPCCVWTASAYS*SKAVSM
Trigger: CATCGACACAGCCTTGCTCAAACTGTATGCAGAGGC...CGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTACAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTTGTGGTGAAGGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTGTGGCCTCTGCACCCTaGCCACTGGCGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LVVKDLVEMENCSTLIPIVASAP*PLAEAL
Trigger: GAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCAC...AATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTTGTGGTGAAGGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTCACACAGCTGGGCCCTaGCCCGCCGTGGGTTTCCCG +
Preference number: 5 (lower is better)
Translates to: LVVKDLVEMENCSTLIPIHTAGP*PAVGFP
Trigger: CGGGAAACCCACGGCGGGCAAGGGCCCAGCTGTGTG...AATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS TCA 90 bp TGTAGGATATGGCCCTCCTTAAAGGGCAGCGTCTGCTTCTGTTGCTaGTCCAACATGCTGTGGACTGTGATGAATTCGTCATCGAGCGCT +
Preference number: 5 (lower is better)
Translates to: CRIWPSLKGSVCFCC*SNMLWTVMNSSSSA
Trigger: AGCGCTCGATGACGAATTCATCACAGTCCACAGCATGTTGGATCAGCAACAGAAGCAGACGCTGCCCTTTAAGGAGGGCCATATCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp ATACAGTTTGAGCAAGGCTGTGTCGATGTCCTCCTTGTAGCCATTTaGTACCTCTGTGCTGCGGACCTCGTTCAGGTAGCTCATGAGGAA +
Preference number: 5 (lower is better)
Translates to: IQFEQGCVDVLLVAI*YLCAADLVQVAHEE
Trigger: TTCCTCATGAGCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAGGACATCGACACAGCCTTGCTCAAACTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGTGTCTCTGCAGCTGTTaGGTGGCAGTGAACGTGGCT +
Preference number: 5 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKCLCSC*VAVNVA
Trigger: AGCCACGTTCACTGCCACCAAACAGCTGCAGAGACA...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCACCAGGCTGATGGAGTaGTCACACAGCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GLMDLIALFDGTVTNQQATRLME*SHSTSS
Trigger: GCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGT...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCCCTGAAATTTTTCCTTaGGAATGTTCCTCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: WSSALHVQQAQKELGVPLPEIFP*ECSSGL
Trigger: GAGCCCGGAGGAACATTCCAAAGGAAAAATTTCAGG...GAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTCTTTCTGCAGTCTCTaGTCTATCACAAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: SALHVQQAQKELGVPLAPSFCSL*SITRCS
Trigger: GGAACATCTTGTGATAGACAAGAGACTGCAGAAAGA...GGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTGTCTGAGAGTTGGATaGAGCTTCCTTTCAACTTCA +
Preference number: 5 (lower is better)
Translates to: LLFMSSRLRKNSEFPSHPCLRVG*SFLSTS
Trigger: TGAAGTTGAAAGGAAGCTCAATCCAACTCTCAGACA...AGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATTGGATGAGCTGGGGTTaGTGTGTCTGCTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHWMSWG*CVCWRH
Trigger: GTGCCGCCAGCAGACACACAAACCCCAGCTCATCCA...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCATTCAGGGTCCTCTCTaGTCATATGTACAAGCTGAC +
Preference number: 5 (lower is better)
Translates to: SPFVLADTEHGGHLLFMSIQGPL*SYVQAD
Trigger: GTCAGCTTGTACATATGACAAGAGAGGACCCTGAAT...GGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCACTTGTGGTGAAGGATTaGGTAGAGATGGAAAACTGC +
Preference number: 5 (lower is better)
Translates to: PSSWLTQSMVVICSSCPALVVKD*VEMENC
Trigger: GCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG...TGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS CCA 90 bp ACCTCCTTGACGATCTGCACCCGGTCCTCGTACACCAGAAACATCTaGATGGTTCTGCGTTTGACAGAGATGATGCAAACTTCTACACAG +
Preference number: 5 (lower is better)
Translates to: TSLTICTRSSYTRNI*MVLRLTEMMQTSTQ
Trigger: CTGTGTAGAAGTTTGCATCATCTCTGTCAAACGCAGAACCATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCTTCTACTCTGCGGCTaGCTAGAAGATCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: VVICSSCPAGSERTRSSPLLLCG*LEDPVF
Trigger: AAATACAGGATCTTCTAGCAAGCCGCAGAGTAGAAG...AGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCAGCGAGGAGTCCTTGTaGCGTATGGACGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPSEESL*RMDGRL
Trigger: GAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCT...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTCCAGCAGGCTCAGAAAGTGGACAGGTGAACTCTaGTATGTTTCTGTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ADTEHGGHLLFMSSRLRKWTGEL*YVSVLG
Trigger: CCCCAAAACAGAAACATACAAGAGTTCACCTGTCCA...CTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGACAAGGCAGAATCTTTaGGGAGCTGAGAGCCGGAGA +
Preference number: 5 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKTRQNL*GAESRR
Trigger: TCTCCGGCTCTCAGCTCCCAAAAGATTCTGCCTTGT...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATGTAGTGCAAAATACTTTTaGTGCTTCTCTAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: CLPSSWLTQSMVVICSSCSAKYF*CFSSQA
Trigger: TGCCTGGCTAGAGAAGCACAAAAAGTATTTTGCACT...ACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCACTCACAAAAGGGATTTaGGCATATCTGACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPLTKGI*AYLTKL
Trigger: AAGCTTTGTCAGATATGCCAAAATCCCTTTTGTGAG...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TGTGGGAGAGCAAGCAAAAAGCAAGGGCTGCCCCAGTTGCATCATGGGCATCCATTTAATGGCGCAATGTaGCATATACGGGTAACTTGT +
Preference number: 5 (lower is better)
Translates to: CGRASKKQGLPQLHHGHPFNGAM*HIRVTC
Trigger: ACAAGTTACCCGTATATGCAACATTGCGCCATTAAA...TGGATGCCCATGATGCAACTGGGGCAGCCCTTGCTTTTTGCTTGCTCTCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS TCA 90 bp ACATCAAGCTGGCCGCTTCTGAAGAGCTCTTTAGCTTCCAGGAACTaGAGTTGTGCAAACTGTATAAATCCCGCCTGCTGCAGAATCCTT +
Preference number: 5 (lower is better)
Translates to: TSSWPLLKSSLASRN*SCANCINPACCRIL
Trigger: AAGGATTCTGCAGCAGGCGGGATTTATACAGTTTGCACAACTTCAGTTCCTGGAAGCTAAAGAGCTCTTCAGAAGCGGCCAGCTTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 90 bp CTGGCCGCTTCTGAAGAGCTCTTTAGCTTCCAGGAACTGAAGTTGTaGAAACTGTATAAATCCCGCCTGCTGCAGAATCCTTCTGTACAT +
Preference number: 5 (lower is better)
Translates to: LAASEELFSFQELKL*KLYKSRLLQNPSVH
Trigger: ATGTACAGAAGGATTCTGCAGCAGGCGGGATTTATACAGTTTGCACAACTTCAGTTCCTGGAAGCTAAAGAGCTCTTCAGAAGCGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGGCAGCCAGAAGCATTAGTTCACCCAAGAGTGAGTGCTTGGGTACACAAGGCATCTTTCTGCAGTCTCTaGTCTATCACAAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: RQPEALVHPRVSAWVHKASFCSL*SITRCS
Trigger: GGAACATCTTGTGATAGACAAGAGACTGCAGAAAGA...TGCCTTGTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCACTCACAAAAGGGATTTaGGCATATCTGACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: RCLPSSWLTQSMVVICSSLTKGI*AYLTKL
Trigger: AAGCTTTGTCAGATATGCCAAAATCCCTTTTGTGAG...TGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AGATGTCTCCCTTCGTCCTGGCTGACACAGAGCATGGTGGTCATCTGCTCTTCATTACACAGCATACAGTaGTGCTACAAGGAGAATTTC +
Preference number: 5 (lower is better)
Translates to: RCLPSSWLTQSMVVICSSLHSIQ*CYKENF
Trigger: GAAATTCTCCTTGTAGCACAACTGTATGCTGTGTAA...TGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GATGTTATACAGAAACACAAAAGGAATCCCCGGCCTGTGATGAAGGAGAGGCCGACACATGACTGGGCTTaGAGCTCACACCAATTTACA +
Preference number: 5 (lower is better)
Translates to: DVIQKHKRNPRPVMKERPTHDWA*SSHQFT
Trigger: TGTAAATTGGTGTGAGCTCAAAGCCCAGTCATGTGT...CGGCCTCTCCTTCATCACAGGCCGGGGATTCCTTTTGTGTTTCTGTATAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCCCTGAAATTTTTCCTTaGGAATGTTCCTCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAPEIFP*ECSSGL
Trigger: GAGCCCGGAGGAACATTCCAAAGGAAAAATTTCAGG...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTATTCTAAAGGATGTCTCCCTATCCTCTaGACGATCGGCGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GFGRDGKLLNFNSHYSKGCLPIL*TIGGLS
Trigger: GGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGACA...TCCTTTAGAATAATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp AAGAAAGAAGGAACAAAGGTACTTCTCCAGGGTCAGCCGTTTCTGAGGGCAAAGAGTGCAAAATACTTTTaGTGCTTCTCTAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: KKEGTKVLLQGQPFLRAKSAKYF*CFSSQA
Trigger: TGCCTGGCTAGAGAAGCACAAAAAGTATTTTGCACT...CTTTGCCCTCAGAAACGGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGGACAGGTGAACTCTaGTATGTTTCTGTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GLMDLIALFDGTVTNQQAWTGEL*YVSVLG
Trigger: CCCCAAAACAGAAACATACAAGAGTTCACCTGTCCA...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp TTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTGAGAAAGAACCATTCAACAGATCTTCACTaGCTAGGCAGCCAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: LLYSMAQLQISRPVRKNHSTDLH*LGSQKH
Trigger: ATGCTTCTGGCTGCCTAGCAAGTGAAGATCTGTTGA...ATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTGGATGTTTTTGCTTCTaGACCCACTTAGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: TESPTGKTHDWALSSHQFGCFCF*THLESQ
Trigger: TTGGGACTCTAAGTGGGTCAAGAAGCAAAAACATCC...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp ACAGAGTCACCCACAGGTAAAACACATGACTGGGCTTTGAGCTCACACCAATTTCTTGTGGTGAAGGATTaGGTAGAGATGGAAAACTGC +
Preference number: 5 (lower is better)
Translates to: TESPTGKTHDWALSSHQFLVVKD*VEMENC
Trigger: GCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG...AAATTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GGTCTGATGGATCTAATTGCTCTATTCGATGGCACAGTTACAAATCAGCAGGCCTGTCTGAGAGTTGGATaGAGCTTCCTTTCAACTTCA +
Preference number: 5 (lower is better)
Translates to: GLMDLIALFDGTVTNQQACLRVG*SFLSTS
Trigger: TGAAGTTGAAAGGAAGCTCAATCCAACTCTCAGACA...GGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCATCAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp GACAACAGCTTCAGCTCGTCATCGATGTTATACAGAAACACAAAAGGAATCCCCTTTAATGGCGCAATGTaGCATATACGGGTAACTTGT +
Preference number: 5 (lower is better)
Translates to: DNSFSSSSMLYRNTKGIPFNGAM*HIRVTC
Trigger: ACAAGTTACCCGTATATGCAACATTGCGCCATTAAA...GGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS-3UTR CAA 90 bp CTTGTGGTGAAGGATTTGGTAGAGATGGAAAACTGCTCAACTTTAATTCCCATTTCTCAGAAATATGATTaGAGAAAAGGGCCTTGTAGG +
Preference number: 5 (lower is better)
Translates to: LVVKDLVEMENCSTLIPISQKYD*RKGPCR
Trigger: CCTACAAGGCCCTTTTCTCAAATCATATTTCTGAGA...AATGGGAATTAAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp CTCCGACCAGTGCACGGGGGCGCGCTGGGATATCCCTaGGACTGTGGCAAACATGCCCAGCCCTCCGGGGCC +
Preference number: 6 (lower is better)
Translates to: LRPVHGGALGYP*DCGKHAQPSGA
Trigger: GGCCCCGGAGGGCTGGGCATGTTTGCCACAGTCGCAGGGATATCCCAGCGCGCCCCCGTGCACTGGTCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp GCGCCTTCTCATGCTCGCCCAGCTTCCCGTGCAGGATaGCGCTCTCCATGGGCAGGCCAGCTCCCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: APSHARPASRAG*RSPWAGQLPAA
Trigger: GGCTGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp GCAGGTCCACGGCAGCCACGGCCAGCTCGTGGGCAGTaGGGCCAGCATGCAGGTAGATGGCCAGCAGCGTGT +
Preference number: 6 (lower is better)
Translates to: AGPRQPRPARGQ*GQHAGRWPAAC
Trigger: ACACGCTGCTGGCCATCTACCTGCATGCTGGCCCCACTGCCCACGAGCTGGCCGTGGCTGCCGTGGACCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp GCAGCTTGGCCTGCGTCTCGGTGGCCTCTGCACCCTTaGCACTGGCGGAGGCCCTCTGCAGCAGCACCTCTT +
Preference number: 6 (lower is better)
Translates to: AAWPASRWPLHP*HWRRPSAAAPL
Trigger: AAGAGGTGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp TGGCCTGCGTCTCGGTGGCCTCTGCACCCTTGCCACTaGCGGAGGCCCTCTGCAGCAGCACCTCTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: WPASRWPLHPCH*RRPSAAAPLPG
Trigger: ACCTGGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp AGCGTAAAGGCTTTGATGCTCATCATGTCTACTGGCTaGTCTGCGGCGCCGGCGCCCGCCGTCCCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: SVKALMLIMSTG*SAAPAPAVPRR
Trigger: GCGGCGCGGGACGGCGGGCGCCGGCGCCGCAGATCAGCCAGTAGACATGATGAGCATCAAAGCCTTTACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393359.7
CDS CCA 72 bp GCTCGCCCAGCTTCCCGTGCAGGATGGCGCTCTCCATaGGCAGGCCAGCTCCCTGCAGCCTCTCGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: ARPASRAGWRSP*AGQLPAASREE
Trigger: TTCTTCTCGAGAGGCTGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp GGCCAGCAGCGTGTGAAAGAGTTGCTGGCGGTGGGGTaGGTCTCGGCCCTCGGAGCACCACAGGCAGTAGTC +
Preference number: 6 (lower is better)
Translates to: GQQRVKELLAVG*VSALGAPQAVV
Trigger: GACTACTGCCTGTGGTGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAACTCTTTCACACGCTGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp AGTGGGGCCAGCATGCAGGTAGATGGCCAGCAGCGTGTGAAAGAGTaGCTGGCGGTGGGGTGGGTCTCGGCCCTCGGAGCACCACAGGCA +
Preference number: 6 (lower is better)
Translates to: SGASMQVDGQQRVKE*LAVGWVSALGAPQA
Trigger: TGCCTGTGGTGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAACTCTTTCACACGCTGCTGGCCATCTACCTGCATGCTGGCCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp CCCACTCACAGGGTTCTCGTTCAGTGCAAACGTGGCTaGCCCCTTGATGCGGGCCCCCGAAGGCACTGGCTC +
Preference number: 6 (lower is better)
Translates to: PTHRVLVQCKRG*PLDAGPRRHWL
Trigger: GAGCCAGTGCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACGTTTGCACTGAACGAGAACCCTGTGAGTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp CACAGGAAGTGGCCGTCCACAGCCACAGCGAGGGGCTaGTCGGCAGTCGACACCTCCTTGACGATCTGCACC +
Preference number: 6 (lower is better)
Translates to: HRKWPSTATARG*SAVDTSLTICT
Trigger: GGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGCTGTGGACGGCCACTTCCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp ATATGCAGCGCCTTCTCATGCTCGCCCAGCTTCCCGTaGAGGATGGCGCTCTCCATGGGCAGGCCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: ICSAFSCSPSFP*RMALSMGRPAP
Trigger: GGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCATAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp CGTGGCTGCCCCCTTGATGCGGGCCCCCGAAGGCACTaGCTCGAGGTTCAGCATGTTGACCAGGCTGATGGA +
Preference number: 6 (lower is better)
Translates to: RGCPLDAGPRRH*LEVQHVDQADG
Trigger: TCCATCAGCCTGGTCAACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp ATCTGCAGCACCTGGGCTGCATCAAATTCGGTGGCGTaGCGGTTCAGCAGGTCCACGGCAGCCACGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ICSTWAASNSVA*RFSRSTAATAS
Trigger: GCTGGCCGTGGCTGCCGTGGACCTGCTGAACCGCCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp GCAGCATCTGCAGCACCTGGGCTGCATCAAATTCGGTaGCGTGGCGGTTCAGCAGGTCCACGGCAGCCACGG +
Preference number: 6 (lower is better)
Translates to: AASAAPGLHQIR*RGGSAGPRQPR
Trigger: CCGTGGCTGCCGTGGACCTGCTGAACCGCCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAGATGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp AGAGGTCCCTGCCGCAGCACTCCACGCACTCTATGTTaGCGCGCTCCTTGTCGCCCATCAGCAGCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: RGPCRSTPRTLC*RAPCRPSAAPA
Trigger: AGCGGGAGCTGCTGATGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGAGTGCTGCGGCAGGGACCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp AAGGACACAGCCGCCCCAATCACATTCTCCGACCAGTaGACGGGGGCGCGCTGGGATATCCCTGCGACTGTG +
Preference number: 6 (lower is better)
Translates to: KDTAAPITFSDQ*TGARWDIPATV
Trigger: CACAGTCGCAGGGATATCCCAGCGCGCCCCCGTGCACTGGTCGGAGAATGTGATTGGGGCGGCTGTGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp TGCAGCTCGTGCACCAGGATATGCAGCGCCTTCTCATaGTCGCCCAGCTTCCCGTGCAGGATGGCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: CSSCTRICSAFS*SPSFPCRMALS
Trigger: GGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp GCCGCTGCAAAGTCCTGCAGCTCGTGCACCAGGATATaGAGCGCCTTCTCATGCTCGCCCAGCTTCCCGTGC +
Preference number: 6 (lower is better)
Translates to: AAAKSCSSCTRI*SAFSCSPSFPC
Trigger: GCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp GCCCTCGGAGCACCACAGGCAGTAGTCCTCGGCCGCTaGAAAGTCCTGCAGCTCGTGCACCAGGATATGCAG +
Preference number: 6 (lower is better)
Translates to: ALGAPQAVVLGR*KVLQLVHQDMQ
Trigger: CTGCATATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGCCGAGGACTACTGCCTGTGGTGCTCCGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp GGCCGAGAGCCACCTGCATGGTCCTCCTGGCATGGATaGTGTCCCTCATGGCCCCCATCAGGAATGGGCAGA +
Preference number: 6 (lower is better)
Translates to: GREPPAWSSWHG*CPSWPPSGMGR
Trigger: TCTGCCCATTCCTGATGGGGGCCATGAGGGACAGCATCCATGCCAGGAGGACCATGCAGGTGGCTCTCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp GACAAGCGTAAAGGCTTTGATGCTCATCATGTCTACTaGCTGATCTGCGGCGCCGGCGCCCGCCGTCCCGCG +
Preference number: 6 (lower is better)
Translates to: DKRKGFDAHHVY*LICGAGARRPA
Trigger: CGCGGGACGGCGGGCGCCGGCGCCGCAGATCAGCCAGTAGACATGATGAGCATCAAAGCCTTTACGCTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393359.7
CDS CAA 72 bp CCGCAGCACTCCACGCACTCTATGTTGACGCGCTCCTaGTCGCCCATCAGCAGCTCCCGCTCCACAGCAGAG +
Preference number: 6 (lower is better)
Translates to: PQHSTHSMLTRS*SPISSSRSTAE
Trigger: CTCTGCTGTGGAGCGGGAGCTGCTGATGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGAGTGCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 72 bp ACAGGGTTCTCGTTCAGTGCAAACGTGGCTGCCCCCTaGATGCGGGCCCCCGAAGGCACTGGCTCGAGGTTC +
Preference number: 6 (lower is better)
Translates to: TGFSFSANVAAP*MRAPEGTGSRF
Trigger: GAACCTCGAGCCAGTGCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACGTTTGCACTGAACGAGAACCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 72 bp GCCACAGCGAGGGGCTGCTCGGCAGTCGACACCTCCTaGACGATCTGCACCCGGTCCTCGTACACCAGAAAC +
Preference number: 6 (lower is better)
Translates to: ATARGCSAVDTS*TICTRSSYTRN
Trigger: GTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 72 bp AGCATGCAGGTAGATGGCCAGCAGCGTGTGAAAGAGTaGCTGGCGGTGGGGTGGGTCTCGGCCCTCGGAGCA +
Preference number: 6 (lower is better)
Translates to: SMQVDGQQRVKE*LAVGWVSALGA
Trigger: TGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAACTCTTTCACACGCTGCTGGCCATCTACCTGCATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp AGGTCCCTGCCGCAGCACTCCACGCACTCTATGTTGACGCGCTCCTaGTCGCCCATCAGCAGCTCCCGCTCCACAGCAGAGACAAGCGTA +
Preference number: 6 (lower is better)
Translates to: RSLPQHSTHSMLTRS*SPISSSRSTAETSV
Trigger: TACGCTTGTCTCTGCTGTGGAGCGGGAGCTGCTGATGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGAGTGCTGCGGCAGGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp CCGTCCACAGCCACAGCGAGGGGCTGCTCGGCAGTCGACACCTCCTaGACGATCTGCACCCGGTCCTCGTACACCAGAAACATCTGGATG +
Preference number: 6 (lower is better)
Translates to: PSTATARGCSAVDTS*TICTRSSYTRNIWM
Trigger: CATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGCTGTGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp CCACAGCGAGGGGCTGCTCGGCAGTCGACACCTCCTTaGCGATCTGCACCCGGTCCTCGTACACCAGAAACA +
Preference number: 6 (lower is better)
Translates to: PQRGAARQSTPP*RSAPGPRTPET
Trigger: TGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp GGCCCGCCAGCAGGAACTCCTGTCTCCCTATCCTCTTaGCGATCGGCGGCCTCTCCTCACTGCAGTAGGGAA +
Preference number: 6 (lower is better)
Translates to: GPPAGTPVSLSS*RSAASPHCSRE
Trigger: TTCCCTACTGCAGTGAGGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGACAGGAGTTCCTGCTGGCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp CCTCCAACAGGAAGTGGTAGACGAAGCAGTCGTTGGTaGCCACGTAGAGGTCCCTGCCGCAGCACTCCACGC +
Preference number: 6 (lower is better)
Translates to: PPTGSGRRSSRW*PRRGPCRSTPR
Trigger: GCGTGGAGTGCTGCGGCAGGGACCTCTACGTGGGCACCAACGACTGCTTCGTCTACCACTTCCTGTTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp TCCCTCATGGCCCCCATCAGGAATGGGCAGAGGAGCTaGACTGACCAGGTGTCAGGCAGCATCTGCAGCACC +
Preference number: 6 (lower is better)
Translates to: SLMAPIRNGQRS*TDQVSGSICST
Trigger: GGTGCTGCAGATGCTGCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATTCCTGATGGGGGCCATGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp CCAATCACATTCTCCGACCAGTGCACGGGGGCGCGCTaGGATATCCCTGCGACTGTGGCAAACATGCCCAGC +
Preference number: 6 (lower is better)
Translates to: PITFSDQCTGAR*DIPATVANMPS
Trigger: GCTGGGCATGTTTGCCACAGTCGCAGGGATATCCCAGCGCGCCCCCGTGCACTGGTCGGAGAATGTGATTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 72 bp AGGCTGATGGAGTTGTCACACAGCACCAGCAGCCTGTaGAGTGCTGAGGCCGCACGCAGCTCGTTCACGGGC +
Preference number: 6 (lower is better)
Translates to: RLMELSHSTSSL*SAEAARSSFTG
Trigger: GCCCGTGAACGAGCTGCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGCTGTGTGACAACTCCATCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp AGCTCGTTCACGGGCTTCTTGAAGCCCAAGTGTCTCTGCAGCTGTTaGGTGGCAGTGAACGTGGCTGGCCCAGCAGGCACTGGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSFTGFLKPKCLCSC*VAVNVAGPAGTGLS
Trigger: GGAGAGGCCAGTGCCTGCTGGGCCAGCCACGTTCACTGCCACCAAACAGCTGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp CCCTTGATGCGGGCCCCCGAAGGCACTGGCTCGAGGTTCAGCATGTaGACCAGGCTGATGGAGTTGTCACACAGCACCAGCAGCCTGTTG +
Preference number: 6 (lower is better)
Translates to: PLMRAPEGTGSRFSM*TRLMELSHSTSSLL
Trigger: CAACAGGCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGTCAACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGCCCGCATCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp AAGTGGACTCGGTATAAATCAGATTTCTGGAGCAGCCGCCGCAGCTaGGCCTGCGTCTCGGTGGCCTCTGCACCCTTGCCACTGGCGGAG +
Preference number: 6 (lower is better)
Translates to: KWTRYKSDFWSSRRS*ACVSVASAPLPLAE
Trigger: CTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCGGCTGCTCCAGAAATCTGATTTATACCGAGTCCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp CTTCTCCTGGTCCCCCTGGGTCAGCTGGTTCAGGTCTaGGTACTCATGAAGAGGAGGGTGGGACCGGGTGAA +
Preference number: 6 (lower is better)
Translates to: LLLVPLGQLVQV*VLMKRRVGPGE
Trigger: TTCACCCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCTGAACCAGCTGACCCAGGGGGACCAGGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp CAGAGGAGCTGCACTGACCAGGTGTCAGGCAGCATCTaGAGCACCTGGGCTGCATCAAATTCGGTGGCGTGG +
Preference number: 6 (lower is better)
Translates to: QRSCTDQVSGSI*STWAASNSVAW
Trigger: CCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAGATGCTGCCTGACACCTGGTCAGTGCAGCTCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp GAAGGCACTGGCTCGAGGTTCAGCATGTTGACCAGGCTGATGGAGTaGTCACACAGCACCAGCAGCCTGTTGAGTGCTGAGGCCGCACGC +
Preference number: 6 (lower is better)
Translates to: EGTGSRFSMLTRLME*SHSTSSLLSAEAAR
Trigger: GCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGTCAACATGCTGAACCTCGAGCCAGTGCCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp GGAGTTGTCACACAGCACCAGCAGCCTGTTGAGTGCTaGGGCCGCACGCAGCTCGTTCACGGGCTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: GVVTQHQQPVEC*GRTQLVHGLLE
Trigger: TTCAAGAAGCCCGTGAACGAGCTGCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGCTGTGTGACAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp AGGGGCTGCTCGGCAGTCGACACCTCCTTGACGATCTaGACCCGGTCCTCGTACACCAGAAACATCTGGATG +
Preference number: 6 (lower is better)
Translates to: RGCSAVDTSLTI*TRSSYTRNIWM
Trigger: CATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAGCAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp TCTCCTCCAACAGGAAGTGGTAGACGAAGCAGTCGTTaGTGCCCACGTAGAGGTCCCTGCCGCAGCACTCCA +
Preference number: 6 (lower is better)
Translates to: SPPTGSGRRSSR*CPRRGPCRSTP
Trigger: TGGAGTGCTGCGGCAGGGACCTCTACGTGGGCACCAACGACTGCTTCGTCTACCACTTCCTGTTGGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 72 bp AGTGCTGAGGCCGCACGCAGCTCGTTCACGGGCTTCTaGAAGCCCAAGTGTCTCTGCAGCTGTTTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: SAEAARSSFTGF*KPKCLCSCLVA
Trigger: TGCCACCAAACAGCTGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGAGCTGCGTGCGGCCTCAGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp AGCCTGTTGAGTGCTGAGGCCGCACGCAGCTCGTTCACGGGCTTCTaGAAGCCCAAGTGTCTCTGCAGCTGTTTGGTGGCAGTGAACGTG +
Preference number: 6 (lower is better)
Translates to: SLLSAEAARSSFTGF*KPKCLCSCLVAVNV
Trigger: CACGTTCACTGCCACCAAACAGCTGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGAGCTGCGTGCGGCCTCAGCACTCAACAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp ATGTTGACCAGGCTGATGGAGTTGTCACACAGCACCAGCAGCCTGTaGAGTGCTGAGGCCGCACGCAGCTCGTTCACGGGCTTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: MLTRLMELSHSTSSL*SAEAARSSFTGFLK
Trigger: CTTCAAGAAGCCCGTGAACGAGCTGCGTGCGGCCTCAGCACTCAACAGGCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGTCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp CATGTCCAGCAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTaGGGCCAAGCTTTTCAAGTCCGAGTGCCAGGACTGGATGAGCTG +
Preference number: 6 (lower is better)
Translates to: HVQQAQKELGVPLAP*GQAFQVRVPGLDEL
Trigger: CAGCTCATCCAGTCCTGGCACTCGGACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTGCTGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp AGGCAGCACTGTCCGTCAGAAGACAGAAGTTCTCAGTaGCCAGGAGGTCCAGCAGGCTGTCGTGGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: RQHCPSEDRSSQ*PGGPAGCRGQP
Trigger: AGGCTGACCACGACAGCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTCTTCTGACGGACAGTGCTGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp GACCAGGAGGTCCAGCAGGCTGTCGTGGTCAGCCTCTaGATACAGTTTGAGCAAGGCTGTGTCGATGTCCTC +
Preference number: 6 (lower is better)
Translates to: DQEVQQAVVVSL*IQFEQGCVDVL
Trigger: GAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp AGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTTaGGCCAAGCTTTTCAAGTCCGAGTGCCAGGACTGG +
Preference number: 6 (lower is better)
Translates to: RLRKNSEFPSHP*AKLFKSECQDW
Trigger: CCAGTCCTGGCACTCGGACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 72 bp CAGGCTCAGAAAGAACTCGGAGTTCCCCTCGCACCCTaGGGCCAAGCTTTTCAAGTCCGAGTGCCAGGACTG +
Preference number: 6 (lower is better)
Translates to: QAQKELGVPLAP*GQAFQVRVPGL
Trigger: CAGTCCTGGCACTCGGACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAACTCCGAGTTCTTTCTGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 72 bp GGCTCGAGGTTCAGCATGTTGACCAGGCTGATGGAGTaGTCACACAGCACCAGCAGCCTGTTGAGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: GSRFSMLTRLME*SHSTSSLLSAE
Trigger: CTCAGCACTCAACAGGCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGTCAACATGCTGAACCTCGAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp CTACCTCTGTGCTGCGGACCTCGTTCAGGTAGCTCATaGGGAAGCGTTTGCACTTGGCCATCTTCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: LPLCCGPRSGSS*GSVCTWPSSPG
Trigger: ACCAGGAGAAGATGGCCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACGAGGTCCGCAGCACAGAGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp CCAGCAGGCTGTCGTGGTCAGCCTCTGCATACAGTTTaGGCAAGGCTGTGTCGATGTCCTCCTTGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: PAGCRGQPLHTV*ARLCRCPPCSH
Trigger: ATGGCTACAAGGAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp GAGCAAGGCTGTGTCGATGTCCTCCTTGTAGCCATTTaGTACCTCTGTGCTGCGGACCTCGTTCAGGTAGCT +
Preference number: 6 (lower is better)
Translates to: EQGCVDVLLVAI*YLCAADLVQVA
Trigger: AGCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAGGACATCGACACAGCCTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp AAGTTCTCAGTGACCAGGAGGTCCAGCAGGCTGTCGTaGTCAGCCTCTGCATACAGTTTGAGCAAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: KFSVTRRSSRLS*SASAYSLSKAV
Trigger: CACAGCCTTGCTCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTGGTCACTGAGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp TGCACCCGGTCCTCGTACACCAGAAACATCTGGATGGTTCTGCGTTaGACAGAGATGATGCAAACTTCTACACAGAAGGGGTCCCCACTC +
Preference number: 6 (lower is better)
Translates to: CTRSSYTRNIWMVLR*TEMMQTSTQKGSPL
Trigger: GAGTGGGGACCCCTTCTGTGTAGAAGTTTGCATCATCTCTGTCAAACGCAGAACCATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp TGGCCCTCCTTAAAGGGCAGCGTCTGCTTCTGTTGCTaGTCCAACATGCTGTGGACTGTGATGAATTCGTCA +
Preference number: 6 (lower is better)
Translates to: WPSLKGSVCFCC*SNMLWTVMNSS
Trigger: TGACGAATTCATCACAGTCCACAGCATGTTGGATCAGCAACAGAAGCAGACGCTGCCCTTTAAGGAGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp GACTGTGATGAATTCGTCATCGAGCGCTATGACGTATaGAAAGGACACAGCCGCCCCAATCACATTCTCCGA +
Preference number: 6 (lower is better)
Translates to: DCDEFVIERYDV*KGHSRPNHILR
Trigger: TCGGAGAATGTGATTGGGGCGGCTGTGTCCTTTCCATACGTCATAGCGCTCGATGACGAATTCATCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp ACGATCTGCACCCGGTCCTCGTACACCAGAAACATCTaGATGGTTCTGCGTTTGACAGAGATGATGCAAACT +
Preference number: 6 (lower is better)
Translates to: TICTRSSYTRNI*MVLRLTEMMQT
Trigger: AGTTTGCATCATCTCTGTCAAACGCAGAACCATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CCA 72 bp GAAAATCCACGATGTATTCATACAGGTCTGAGCGTGTaGAGTCCTGGACATCGCCATTCACAATGTTCACCC +
Preference number: 6 (lower is better)
Translates to: ENPRCIHTGLSV*SPGHRHSQCSP
Trigger: GGGTGAACATTGTGAATGGCGATGTCCAGGACTCCACACGCTCAGACCTGTATGAATACATCGTGGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp AGCACCTCTTCCAGGTACAGCACAGCTAAGTGGGTGTaGTACTCTTCTTTCTGCAGTCTCTTGTCTATCACA +
Preference number: 6 (lower is better)
Translates to: STSSRYSTAKWV*YSSFCSLLSIT
Trigger: TGTGATAGACAAGAGACTGCAGAAAGAAGAGTATCACACCCACTTAGCTGTGCTGTACCTGGAAGAGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp GTAGGTAAGAAAATCCACGATGTATTCATACAGGTCTaGGCGTGTGGAGTCCTGGACATCGCCATTCACAAT +
Preference number: 6 (lower is better)
Translates to: VGKKIHDVFIQV*ACGVLDIAIHN
Trigger: ATTGTGAATGGCGATGTCCAGGACTCCACACGCTCAGACCTGTATGAATACATCGTGGATTTTCTTACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS GCA 72 bp TCTGAAGAGCTCTTTAGCTTCCAGGAACTGAAGTTGTaGAAACTGTATAAATCCCGCCTGCTGCAGAATCCT +
Preference number: 6 (lower is better)
Translates to: SEELFSFQELKL*KLYKSRLLQNP
Trigger: AGGATTCTGCAGCAGGCGGGATTTATACAGTTTGCACAACTTCAGTTCCTGGAAGCTAAAGAGCTCTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS TCA 72 bp AACTGTTCTTCTGCTGTTCATCCAAAGGTCTCTTGGTaGAAACCTGAACTCCGACCTCTTCACTTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: NCSSAVHPKVSW*KPELRPLHFSA
Trigger: TGCAGAAAAGTGAAGAGGTCGGAGTTCAGGTTTTCACCAAGAGACCTTTGGATGAACAGCAGAAGAACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp ACATTACCTGAAATTTTTCCTTTGGAATGTTCCTCCGGGCTCCTTTaGCTAAAACCAAAGCCTCTTCTACTCTGCGGCTTGCTAGAAGAT +
Preference number: 6 (lower is better)
Translates to: TLPEIFPLECSSGLL*LKPKPLLLCGLLED
Trigger: ATCTTCTAGCAAGCCGCAGAGTAGAAGAGGCTTTGGTTTTAGCAAAAGGAGCCCGGAGGAACATTCCAAAGGAAAAATTTCAGGTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5
CDS CAA 90 bp AGGGATTTTGGCATATCTGACAAAGCTTTTTGTCTGAGAGTTGGATaGAGCTTCCTTTCAACTTCATCTTATCGTAGGTGTAGATTAAGT +
Preference number: 6 (lower is better)
Translates to: RDFGISDKAFCLRVG*SFLSTSSYRRCRLS
Trigger: ACTTAATCTACACCTACGATAAGATGAAGTTGAAAGGAAGCTCAATCCAACTCTCAGACAAAAAGCTTTGTCAGATATGCCAAAATCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258449.2
ENST00000393359.7
ENST00000595531.5