RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGFBR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000069702

Ensembl transcript IDs: ENST00000212355.9, ENST00000370399.6, ENST00000417833.2, ENST00000465892.6, ENST00000468996.2, ENST00000470600.1, ENST00000525962.5, ENST00000529608.1, ENST00000532540.5, ENST00000533089.5, ENST00000533370.1

Found 1120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGTGGCAAGTCTCTCTGTCTTCAGATGCCACACCAGGGGGTGTaGGGAGTTGAGCAGGAACACAACAGACTTGTGGTGGATGTGGAC +
Preference number: 1 (lower is better)
Translates to: PSGKSLCLQMPHQGV*GVEQEHNRLVVDVD
Trigger: GTCCACATCCACCACAAGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAGACTTGCCACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 90 bp AACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTaGCCACCGGGGCCGAGTACCGCAGCCATTCAGAGGAGACTCCAA +
Preference number: 1 (lower is better)
Translates to: NLYHNGVIVDHTIKG*PPGPSTAAIQRRLQ
Trigger: TTGGAGTCTCCTCTGAATGGCTGCGGTACTCGGCCCCGGTGGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR GCA 90 bp AGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTaGCTTAACACTTGTCAGGGTGCAGTCCCTGAGGGCAGCACCCAT +
Preference number: 1 (lower is better)
Translates to: RSSALVLAQGTRKEC*LNTCQGAVPEGSTH
Trigger: ATGGGTGCTGCCCTCAGGGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR GCA 90 bp TCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTaGATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCT +
Preference number: 1 (lower is better)
Translates to: SWWITARGLVNVFLF*IMAQIIEASSEVQA
Trigger: AGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 90 bp CTGAGGGCAGCACCCATCAAGGGACACATCAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTA +
Preference number: 1 (lower is better)
Translates to: LRAAPIKGHIRPHRL*QQGQKCASRQRCKL
Trigger: TAATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGTGTCCCTTGATGGGTGCTGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CCA 90 bp CGTACACAGCGTCAGCTCACACTCAACATAAACGTGTCCATTCTCTaGCACAGAGAAGACGCCCTGGGAGGGCACCAAAAAGAGGTCAGT +
Preference number: 1 (lower is better)
Translates to: RTQRQLTLNINVSIL*HREDALGGHQKEVS
Trigger: ACTGACCTCTTTTTGGTGCCCTCCCAGGGCGTCTTCTCTGTGCCAGAGAATGGACACGTTTATGTTGAGTGTGAGCTGACGCTGTGTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR CCA 90 bp AGGGCACCAGGGTCCAGCAGGATCCGTAGCTCAGGAGGAATAGTGTaGACTTCCTCATCTCCCATCTCCTCTGCATTATTTTCAAGCCGA +
Preference number: 1 (lower is better)
Translates to: RAPGSSRIRSSGGIV*TSSSPISSALFSSR
Trigger: TCGGCTTGAAAATAATGCAGAGGAGATGGGAGATGAGGAAGTCCACACTATTCCTCCTGAGCTACGGATCCTGCTGGACCCTGGTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR CCA 90 bp AGGGCACCAGGGTCCAGCAGGATCCGTAGCTCAGGAGGAATAGTGTaGACTTCCTCATCTCCCATCTCCTCATTATTTTCAAGCCGAAGA +
Preference number: 1 (lower is better)
Translates to: RAPGSSRIRSSGGIV*TSSSPISSLFSSRR
Trigger: TCTTCGGCTTGAAAATAATGAGGAGATGGGAGATGAGGAAGTCCACACTATTCCTCCTGAGCTACGGATCCTGCTGGACCCTGGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR GCA 90 bp GGGACACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAA +
Preference number: 1 (lower is better)
Translates to: GTHQTPQVVAARSEV*IQTKVQIRQEDRLE
Trigger: TTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CCA 90 bp ACATTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTaGCTCTCTGAGACCAGGAAACAGTTGTATGCTGGGAATGACAGG +
Preference number: 1 (lower is better)
Translates to: TFDRQGNIHAPLHLF*LSETRKQLYAGNDR
Trigger: CCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 90 bp GGAAGCATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTaGCTCCAGATCTTCATAACCATCTGGCCAACCACTACTGTCCCC +
Preference number: 1 (lower is better)
Translates to: GSISFIHISRKSIIT*LQIFITIWPTTTVP
Trigger: GGGGACAGTAGTGGTTGGCCAGATGGTTATGAAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR GCA 90 bp TTCTCATTGTCACATTTGACAGACAGGGCAATATCCACGCTCCCTTaGACCTCTTCTGGCTCTCTGAGACCAGGAAACAGTTGTATGCTG +
Preference number: 1 (lower is better)
Translates to: FSLSHLTDRAISTLP*TSSGSLRPGNSCML
Trigger: CAGCATACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 90 bp TTCAGCCTTAGTAACAGATACCTCAACATAAACGTGTCCATTCTCTaGCACAGAGAAGACGCCCTGGGAGGGCACCAAAAAGAGGTCAGT +
Preference number: 1 (lower is better)
Translates to: FSLSNRYLNINVSIL*HREDALGGHQKEVS
Trigger: ACTGACCTCTTTTTGGTGCCCTCCCAGGGCGTCTTCTCTGTGCCAGAGAATGGACACGTTTATGTTGAGGTATCTGTTACTAAGGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR CCA 90 bp CTAGGATGTGTCCCATGTATAGTGCGCTGCTTTCTGAATCTTTTGTaGGGAAGGGGTCCACTTACACAATTTCTGGAGTTTCAGCAGAGG +
Preference number: 1 (lower is better)
Translates to: LGCVPCIVRCFLNLL*GRGPLTQFLEFQQR
Trigger: CCTCTGCTGAAACTCCAGAAATTGTGTAAGTGGACCCCTTCCCCACAAAAGATTCAGAAAGCAGCGCACTATACATGGGACACATCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR CCA 90 bp TACAATCATCATTCAAACCATGAGGTAGTTACAGTACAAAAAGACTaGCACGCGTGTGAGCACCCCACACACACTCACAATCATGCCCAC +
Preference number: 1 (lower is better)
Translates to: YNHHSNHEVVTVQKD*HACEHPTHTHNHAH
Trigger: GTGGGCATGATTGTGAGTGTGTGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTTTGAATGATGATTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR TCA 90 bp CCTCACTGGTTCTACTATCTGGCTATTAACCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCAC +
Preference number: 1 (lower is better)
Translates to: PHWFYYLAINPLPTP*VWVKLRAPNYGCSH
Trigger: GTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR TCA 90 bp AATGAGTGCCCTTTTCCAATCTCAGCACTGTCTTGGTGGAATTGGTaGCACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCAT +
Preference number: 1 (lower is better)
Translates to: NECPFPISALSWWNW*HYSDNQLETDRICH
Trigger: ATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAATTCCACCAAGACAGTGCTGAGATTGGAAAAGGGCACTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR TCA 90 bp CCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGTaGGAGAAAATTCTTCCCTATGTTGCACTTTGGAGGGAACACTTG +
Preference number: 1 (lower is better)
Translates to: PFCCFGLKVLSKVIE*EKILPYVALWREHL
Trigger: CAAGTGTTCCCTCCAAAGTGCAACATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 90 bp CACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTaGGTGAGAGAAAATTCTTCCCTATGTTGCACTTTGGAGGGAACA +
Preference number: 1 (lower is better)
Translates to: HTLLLLWVEGTQQGN*VRENSSLCCTLEGT
Trigger: TGTTCCCTCCAAAGTGCAACATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 90 bp AAGAATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTaGCAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCT +
Preference number: 1 (lower is better)
Translates to: KNLFLQPRSSSHCHI*QTGQYPRSLAPLLA
Trigger: AGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 90 bp CAGCACTGTCTTGGTGGAATTGGTGACACTATTCAGATAACCAACTaGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTT +
Preference number: 1 (lower is better)
Translates to: QHCLGGIGDTIQITN*RPTGFAMHLHLATV
Trigger: AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAATTCCACCAAGACAGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR TCA 90 bp TTCAAGCCGAAGATGAAATCTATTAGCCACAGGAGCCATTGTGTATaGAGTTATTGGACTATAGCCATTGTCCAAAGCCCACTTCACCAG +
Preference number: 1 (lower is better)
Translates to: FKPKMKSISHRSHCV*SYWTIAIVQSPLHQ
Trigger: CTGGTGAAGTGGGCTTTGGACAATGGCTATAGTCCAATAACTTCATACACAATGGCTCCTGTGGCTAATAGATTTCATCTTCGGCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 90 bp GCTCCATACTCTTTTCGGGCCCAATTTAACAGATGTTCATTTCCATaGGGGAAGTTCCTTTCTTCTGTTTCTGCTGTCAAGGAGAAGTTT +
Preference number: 1 (lower is better)
Translates to: APYSFRAQFNRCSFP*GKFLSSVSAVKEKF
Trigger: AAACTTCTCCTTGACAGCAGAAACAGAAGAAAGGAACTTCCCCCATGGAAATGAACATCTGTTAAATTGGGCCCGAAAAGAGTATGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR TCA 90 bp AATATATGGGATATATTTAAGGCAAGAGAAGTAAGGCAATCCAAATaGGTGCCCTTTTCCAATCTCAGCACTGTCTTGGTGGAATTGGTG +
Preference number: 1 (lower is better)
Translates to: NIWDIFKAREVRQSK*VPFSNLSTVLVELV
Trigger: CACCAATTCCACCAAGACAGTGCTGAGATTGGAAAAGGGCACTCATTTGGATTGCCTTACTTCTCTTGCCTTAAATATATCCCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR CCA 90 bp ATTCTCAATAATGGTGTAATGAGACATCCTATCAGGGTTCGAATATaGAGAGATAAAGCACGTTTGGATGGCAAATCCCAGTTCTTGTTC +
Preference number: 1 (lower is better)
Translates to: ILNNGVMRHPIRVRI*RDKARLDGKSQFLF
Trigger: GAACAAGAACTGGGATTTGCCATCCAAACGTGCTTTATCTCTCCATATTCGAACCCTGATAGGATGTCTCATTACACCATTATTGAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR TCA 90 bp CACTTCAAGATCAGGATGAGATTTTTGACCACTTCAAGATCCTCTTaGGAAGGTCTTATATCAATTGTTATATCCACCTGGAAAGCACTG +
Preference number: 1 (lower is better)
Translates to: HFKIRMRFLTTSRSS*EGLISIVISTWKAL
Trigger: CAGTGCTTTCCAGGTGGATATAACAATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGATCTTGAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 90 bp GGAACCAAAATCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATaGGTCCTGCCCTTGGCAGTAGCTGAGCTGAGCTGGGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: GTKIQPSESGHEAQP*VLPLAVAELSWAGL
Trigger: CAGCCCAGCCCAGCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCATGGGCTGGGCTGGGTTaGGCCGGGTTGGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPWAGLG*AGLGWV
Trigger: AACCCAGCCCAACCCGGCCCAACCCAGCCCAGCCCA...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 90 bp GACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTaGGCCTTCCCCTCCCCGGATGGGCGGGTTCTGCAGGGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: DSPGNIWERKRKASI*AFPSPDGRVLQGRQ
Trigger: CTGCCTGCCCTGCAGAACCCGCCCATCCGGGGAGGGGAAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCCACACCATCAAGGGCTaGCCACCGGGGCCGAGTACC +
Preference number: 2 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFHTIKG*PPGPST
Trigger: GGTACTCGGCCCCGGTGGTCAGCCCTTGATGGTGTG...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp GATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCGCCCCTGGCCTGCAGTaGGGAGATTCAGGACATGCA +
Preference number: 2 (lower is better)
Translates to: DVPQGPRQECSDHKGCKRAPGLQ*GDSGHA
Trigger: TGCATGTCCTGAATCTCCGCACTGCAGGCCAGGGGC...GCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR CCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCTGGGCTGGGCTGGGTTaGGCCGGGTTGGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: WPRAQERNVALTLVRVQSWAGLG*AGLGWV
Trigger: AACCCAGCCCAACCCGGCCCAACCCAGCCCAGCCCA...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGGGCTGGGCTGGGTTaGGCCGGGTTGGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: SSVVQKPRVMFILALGVGWAGLG*AGLGWV
Trigger: AACCCAGCCCAACCCGGCCCAACCCAGCCCAGCCCA...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGAATGACAGGGTCCTTTaGCCGAGGGAGCCCATCTTC +
Preference number: 2 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQNDRVL*PREPIF
Trigger: GAAGATGGGCTCCCTCGGCCAAAGGACCCTGTCATT...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 90 bp CACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGACCAGGAAACAGTaGTATGCTGGGAATGACAGGGTCCTTTGGCCGAGGGAGCCCATC +
Preference number: 2 (lower is better)
Translates to: HAPLHLFWLSETRKQ*YAGNDRVLWPREPI
Trigger: GATGGGCTCCCTCGGCCAAAGGACCCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCGTCCAGCGAGGTaGAGGCTTCGTCAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: TSSYSASWPRLSRRPARCRRPAR*RLRQEA
Trigger: TGCCTCCTGACGAAGCCTGCACCTCGCTGGACGCCT...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGGTGGCAGCCCAGTTGTaGCTCTGCTGGCACAGCCTG +
Preference number: 2 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSEVAAQL*LCWHSL
Trigger: CAGGCTGTGCCAGCAGAGGCACAACTGGGCTGCCAC...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR TCA 90 bp AACCATCTGGCCAACCACTACTGTCCCCAAGGGCTGGAACCTGTATCACAATGGAAACCCCCAAGCCTGTaGGGGGCTGGTGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: NHLANHYCPQGLEPVSQWKPPSL*GAGGED
Trigger: GTCTTCTCCACCAGCCCCTCACAGGCTTGGGGGTTT...CCATTGTGATACAGGTTCCAGCCCTTGGGGACAGTAGTGGTTGGCCAGATGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCGGGGGTGTGGGGAGTTaGGCAGGAACACAACAGACT +
Preference number: 2 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFGGVGS*AGTQQT
Trigger: AGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCC...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGAGGCACTGACAGGTaGCAGTTCACACAGTGCACC +
Preference number: 2 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLGGTDR*QFTQCT
Trigger: GGTGCACTGTGTGAACTGTCACCTGTCAGTGCCTCC...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR GCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATCTGCGTGCTGCCGATaGTGTGGGCAGCACTGCTGT +
Preference number: 2 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKSACCR*CGQHCC
Trigger: ACAGCAGTGCTGCCCACAGCATCGGCAGCACGCAGA...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCACGGAGATTCAGGACATaGACCTCCTGTGGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPRRFRT*TSCGSP
Trigger: TGGGCTGCCACAGGAGGTGCATGTCCTGAATCTCCG...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR CAA 90 bp GCAAGTCTCTCTGTCTTCAGATGCCACACCAGGGGGTGTGGGGAGTaGAGCAGGAACACAACAGACTTGTGGTGGATGTGGACTGAGGAG +
Preference number: 2 (lower is better)
Translates to: ASLSVFRCHTRGCGE*SRNTTDLWWMWTEE
Trigger: CTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAGACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp AACCATCTGGCCAACCACTACTGTCCCCAAGGGCTGGAACCTGTATCACAATGGCTCTCTGTCTTCAGATaGCACACCAGGGGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: NHLANHYCPQGLEPVSQWLSVFR*HTRGCG
Trigger: CCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAG...CCATTGTGATACAGGTTCCAGCCCTTGGGGACAGTAGTGGTTGGCCAGATGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp AACCATCTGGCCAACCACTACTGTCCCCAAGGGCTGGAACCTGTATCACAATGGAAGGCCTGGACAGGATaGGAGGCACTGACAGGTGAC +
Preference number: 2 (lower is better)
Translates to: NHLANHYCPQGLEPVSQWKAWTG*EALTGD
Trigger: GTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTT...CCATTGTGATACAGGTTCCAGCCCTTGGGGACAGTAGTGGTTGGCCAGATGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR TCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAACAAAATCCAGCCCTCTaGGTCTGGACACGAGGCTCA +
Preference number: 2 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKQNPAL*VWTRGS
Trigger: TGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTG...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp GAGAATAGATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGGGGTTCCTCACCTGCTaGAGGCTGCAATTAAACACC +
Preference number: 2 (lower is better)
Translates to: ENRCTTRPPSGVLRSQRLGFLTC*RLQLNT
Trigger: GGTGTTTAATTGCAGCCTTCAGCAGGTGAGGAACCC...CAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATCTATTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCGGCAACTTCTGGGGGTaGTTCTCCATCTTCGTACAC +
Preference number: 2 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFGNFWG*FSIFVH
Trigger: GTGTACGAAGATGGAGAAGCACCCCCAGAAGTTGCC...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCCGTGGGGCTGTTCCTaGAAGCTGCTGGGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCPWGCS*KLLGFL
Trigger: GAGGAACCCCAGCAGCTTCCAGGAACAGCCCCACGG...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp AGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGACATGCACCTCCTGTaGCAGCCCAGTTGTGCCTCT +
Preference number: 2 (lower is better)
Translates to: RLQTQCPSRLGCPDHGKLDMHLL*QPSCAS
Trigger: AGAGGCACAACTGGGCTGCCACAGGAGGTGCATGTC...CAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR CCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGGAGATAAAGCACGTTTaGATGGCAAATCCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQEIKHV*MANPSS
Trigger: AGAACTGGGATTTGCCATCCAAACGTGCTTTATCTC...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR CAA 90 bp CAGCCATTCAGAGGAGACTCCAAAACAAAGTGTGTGCCATTCATCTaGGCCTTGCAGGTAGGATCCAACAGGGTGACGTCCATCCCCGAG +
Preference number: 2 (lower is better)
Translates to: QPFRGDSKTKCVPFI*ALQVGSNRVTSIPE
Trigger: CTCGGGGATGGACGTCACCCTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAGTCTCCTCTGAATGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCAAACCCCCAAGCCTGTaGGGGGCTGGTGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCKPPSL*GAGGED
Trigger: GTCTTCTCCACCAGCCCCTCACAGGCTTGGGGGTTT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAACCCCCAAGCCTGTaGGGGGCTGGTGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLKPPSL*GAGGED
Trigger: GTCTTCTCCACCAGCCCCTCACAGGCTTGGGGGTTT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATCAGGATGGGAGGCACTaGCAGGTGACAGTTCACACA +
Preference number: 2 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNQDGRH*QVTVHT
Trigger: TGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTG...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR TCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGAGATGGGATTCAGGTaGAGTGTGACCTCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLEMGFR*SVTSLC
Trigger: ACAGAGAGAGGTCACACTTCACCTGAATCCCATCTC...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR GCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCTGCTGTGGGCAGCACTaGTGTTTTCCGAGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCCCGQH*CFPRLA
Trigger: CGCCAGCCTCGGAAAACAGCAGTGCTGCCCACAGCA...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAAACGTGTCCATTCTCTaGCACAGAGAAGACGCCCTG +
Preference number: 2 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKNVSIL*HREDAL
Trigger: CAGGGCGTCTTCTCTGTGCCAGAGAATGGACACGTT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp ATTGTCACATTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCAAAATCCAGCCCTCTaGGTCTGGACACGAGGCTCA +
Preference number: 2 (lower is better)
Translates to: IVTFDRQGNIHAPLHLFWQNPAL*VWTRGS
Trigger: TGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTG...CCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGGCCCTGGGTGTGGGGTaGATACAACGGGTGATCTTT +
Preference number: 2 (lower is better)
Translates to: FWPRAQERNVALTLVRVQALGVG*IQRVIF
Trigger: AAAGATCACCCGTTGTATTCACCCCACACCCAGGGC...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGATTCAGGTGAAGTGTaGCCACACCCCTTTTCTCTA +
Preference number: 2 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLDSGEV*PHPFSL
Trigger: TAGAGAAAAGGGGTGTGGTCACACTTCACCTGAATC...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR TCA 90 bp ATTGTCACATTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTG +
Preference number: 2 (lower is better)
Translates to: IVTFDRQGNIHAPLHLFWVVDVD*GDGIQV
Trigger: CACCTGAATCCCATCTCCTCAGTCCACATCCACCAC...CCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTACATCACACACCCTTCTaGTGCTTTGGGTTGAAGGTA +
Preference number: 2 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLHHTPF*CFGLKV
Trigger: TACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGCCGCATCTCCTCACTaGTTCTACTATCTGGCTATT +
Preference number: 2 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPAASPH*FYYLAI
Trigger: AATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGC...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCACAACAGACTTGTGGTaGATGTGGACTGAGGAGATG +
Preference number: 2 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFTTDLW*MWTEEM
Trigger: CATCTCCTCAGTCCACATCCACCACAAGTCTGTTGT...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCACTGTCCCCAAGGGCTaGAACCTGTATCACAATGGA +
Preference number: 2 (lower is better)
Translates to: WPRAQERNVALTLVRVQSTVPKG*NLYHNG
Trigger: TCCATTGTGATACAGGTTCCAGCCCTTGGGGACAGT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCATCTTCATAACCATCTaGCCAACCACTACTGTCCCC +
Preference number: 2 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFIFITI*PTTTVP
Trigger: GGGGACAGTAGTGGTTGGCCAGATGGTTATGAAGAT...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGACCATGGAAAATTGGTaGAGAAATTGGATTTGGTTC +
Preference number: 2 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQTMENW*RNWIWF
Trigger: GAACCAAATCCAATTTCTCCACCAATTTTCCATGGT...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAGCCCTGGGTGTGGGGTaGATACAACGGGTGATCTTT +
Preference number: 2 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAALGVG*IQRVIF
Trigger: AAAGATCACCCGTTGTATTCACCCCACACCCAGGGC...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAACCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGG +
Preference number: 2 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKPLPTP*VWVKLR
Trigger: CCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGG...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTGACCGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTG +
Preference number: 2 (lower is better)
Translates to: LEPVSQWSYSRPHHQGLTVVDVD*GDGIQV
Trigger: CACCTGAATCCCATCTCCTCAGTCCACATCCACCAC...GGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGTTGTATGCTGGGAATaGCAGGGTCCTTTGGCCGAG +
Preference number: 2 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLVVCWE*QGPLAE
Trigger: CTCGGCCAAAGGACCCTGTCATTCCCAGCATACAAC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp AGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGCCTCTTCTGGCTCTCTaGGACCAGGAAACAGTTGTA +
Preference number: 2 (lower is better)
Translates to: RLQTQCPSRLGCPDHGKLPLLAL*DQETVV
Trigger: TACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGG...CAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp AACCATCTGGCCAACCACTACTGTCCCCAAGGGCTGGAACCTGTATCACAATGGCATCACACACCCTTCTaGTGCTTTGGGTTGAAGGTA +
Preference number: 2 (lower is better)
Translates to: NHLANHYCPQGLEPVSQWHHTPF*CFGLKV
Trigger: TACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG...CCATTGTGATACAGGTTCCAGCCCTTGGGGACAGTAGTGGTTGGCCAGATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTACCAAAACAAAGTGTGTaGCATTCATCTTGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLPKQSV*HSSWPC
Trigger: GCAAGGCCAAGATGAATGGCACACACTTTGTTTTGG...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTTGCTGTGGGCAGCACTaGTGTTTTCCGAGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: GVCKYGKKQEADKVISIGCCGQH*CFPRLA
Trigger: CGCCAGCCTCGGAAAACAGCAGTGCTGCCCACAGCA...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGCAGGGCCCCAAATTATaGATGTTCTCACCTGGACAA +
Preference number: 2 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRQGPKL*MFSPGQ
Trigger: TTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTG...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGGCCGCATCTCCTCACTaGTTCTACTATCTGGCTATT +
Preference number: 2 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSEAASPH*FYYLAI
Trigger: AATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGC...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGCCACACCAGGGGGTGTaGGGAGTTGAGCAGGAACAC +
Preference number: 2 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLPHQGV*GVEQEH
Trigger: GTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGG...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCTCCTCATTCTGGGGCTaGCTGGACATCACACACCCT +
Preference number: 2 (lower is better)
Translates to: ASWWITARGLVNVFLFCISSFWG*LDITHP
Trigger: AGGGTGTGTGATGTCCAGCCAGCCCCAGAATGAGGA...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCAATTTCAGGTTCAGCTaGAGGACTCTAGCACACAGT +
Preference number: 2 (lower is better)
Translates to: WPRAQERNVALTLVRVQSNFRFS*RTLAHS
Trigger: ACTGTGTGCTAGAGTCCTTCAGCTGAACCTGAAATT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR TCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAGAGATGGGATTCAGGTaGAGTGTGACCACACCCCTT +
Preference number: 2 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAEMGFR*SVTTPL
Trigger: AAGGGGTGTGGTCACACTTCACCTGAATCCCATCTC...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR TCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTGGGGGTGTGGGGAGTTaGGCAGGAACACAACAGACT +
Preference number: 2 (lower is better)
Translates to: GVCKYGKKQEADKVISIGGGVGS*AGTQQT
Trigger: AGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCC...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGGGTTCCTCACCTGCTaGAGGCTGCAATTAAACACC +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCGFLTC*RLQLNT
Trigger: GGTGTTTAATTGCAGCCTTCAGCAGGTGAGGAACCC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTGACCTCTGCTGGCACAGCCTaGCAAAACAGTGAAGCTCTC +
Preference number: 2 (lower is better)
Translates to: LEPVSQWSYSRPHHQGLTSAGTA*QNSEAL
Trigger: GAGAGCTTCACTGTTTTGTCAGGCTGTGCCAGCAGA...GGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR CCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGTGGGCTGGGCTGGGTTaGGCCGGGTTGGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: KFALRHFAVVYASMGRNRWAGLG*AGLGWV
Trigger: AACCCAGCCCAACCCGGCCCAACCCAGCCCAGCCCA...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAGCCTGTGAGGGGCTaGTGGAGAAGACCACCATTT +
Preference number: 2 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLKPVRG*WRRPPF
Trigger: AAATGGTGGTCTTCTCCACCAGCCCCTCACAGGCTT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGACTTGTGGTGGATGTaGACTGAGGAGATGGGATTC +
Preference number: 2 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIDLWWM*TEEMGF
Trigger: GAATCCCATCTCCTCAGTCCACATCCACCACAAGTC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GTGAACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGAACACAACAGACTTGTaGTGGATGTGGACTGAGGAG +
Preference number: 2 (lower is better)
Translates to: VNVFLFCIMAQIIEASSENTTDL*WMWTEE
Trigger: CTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTT...CTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCCCACACCAGGGGGTGTaGGGAGTTGAGCAGGAACAC +
Preference number: 2 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGPHQGV*GVEQEH
Trigger: GTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGG...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp AGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGACCCTTCTGCTGCTTTaGGTTGAAGGTACTCAGCAA +
Preference number: 2 (lower is better)
Translates to: RLQTQCPSRLGCPDHGKLTLLLL*VEGTQQ
Trigger: TTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGT...CAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTGACCCCCTTGCACCTCTTCTaGCTCTCTGAGACCAGGAAA +
Preference number: 2 (lower is better)
Translates to: LEPVSQWSYSRPHHQGLTPLHLF*LSETRK
Trigger: TTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGG...GGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCTCTTATTCTGCATCATaGCCCAGATTATCGAGGCGT +
Preference number: 2 (lower is better)
Translates to: TSSYSASWPRLSRRPARCSYSAS*PRLSRR
Trigger: ACGCCTCGATAATCTGGGCCATGATGCAGAATAAGA...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCATGGAGAAATTGGATTTaGTTCCTTCATGCTTGGACC +
Preference number: 2 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPWRNWI*FLHAWT
Trigger: GGTCCAAGCATGAAGGAACCAAATCCAATTTCTCCA...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GAGAATAGATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGGAAAGTGCACTCTCTTaGGACTGTAGAATTTCACAG +
Preference number: 2 (lower is better)
Translates to: ENRCTTRPPSGVLRSQRLESALS*DCRISQ
Trigger: CTGTGAAATTCTACAGTCCCAAGAGAGTGCACTTTC...CAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATCTATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR CAA 90 bp CTTCTCATTGTCACATTTGACAGACAGGGCAATATCCACGCTCCCTaGCACCTCTTCTGGCTCTCTGAGACCAGGAAACAGTTGTATGCT +
Preference number: 2 (lower is better)
Translates to: LLIVTFDRQGNIHAP*HLFWLSETRKQLYA
Trigger: AGCATACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAATGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 90 bp GTCAGCTCACACTGTAGAAAGAGCAGTGAGGTGTTGAAGACAGGCTaGAAGACAAAGCTGAATCGCTTCTTATCCATGTCAGCTTGCGGG +
Preference number: 2 (lower is better)
Translates to: VSSHCRKSSEVLKTG*KTKLNRFLSMSACG
Trigger: CCCGCAAGCTGACATGGATAAGAAGCGATTCAGCTTTGTCTTCAAGCCTGTCTTCAACACCTCACTGCTCTTTCTACAGTGTGAGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR TCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGCAAAATCCAGCCCTCTaGGTCTGGACACGAGGCTCA +
Preference number: 2 (lower is better)
Translates to: VVYASMGRNRKLIRSSALQNPAL*VWTRGS
Trigger: TGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTG...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGCAAAATCCAGCCCTCTaGGTCTGGACACGAGGCTCA +
Preference number: 2 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLQNPAL*VWTRGS
Trigger: TGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTG...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCAAACCCCCAAGCCTGTaGGGGGCTGGTGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTKPPSL*GAGGED
Trigger: GTCTTCTCCACCAGCCCCTCACAGGCTTGGGGGTTT...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR TCA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAACAAGGAGGTATCACTaGGCTTATTTTAGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPTRRYH*AYFSCK
Trigger: TTTGCAGCTAAAATAAGCTCAGTGATACCTCCTTGT...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR TCA 90 bp AGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGCTTGAGTTCGGTGAATaGAGTAACTGCTCCATACTC +
Preference number: 2 (lower is better)
Translates to: RLQTQCPSRLGCPDHGKLLEFGE*SNCSIL
Trigger: GAGTATGGAGCAGTTACTTCATTCACCGAACTCAAG...CAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp AACCATCTGGCCAACCACTACTGTCCCCAAGGGCTGGAACCTGTATCACAATGGTCTCATTGTCACATTTaGCAGACAGGGCAATATCCA +
Preference number: 2 (lower is better)
Translates to: NHLANHYCPQGLEPVSQWSHCHI*QTGQYP
Trigger: TGGATATTGCCCTGTCTGTCAAATGTGACAATGAGA...CCATTGTGATACAGGTTCCAGCCCTTGGGGACAGTAGTGGTTGGCCAGATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCCACACACCCTTCTGCTaGTTTGGGTTGAAGGTACTC +
Preference number: 2 (lower is better)
Translates to: ASWWITARGLVNVFLFCIHTPFC*FGLKVL
Trigger: GAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTG...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: SDNQLETDRICHAFASCYRPHRL*QQGQKC
Trigger: ACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCT...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTACAACAGACTTGTGGTaGATGTGGACTGAGGAGATG +
Preference number: 2 (lower is better)
Translates to: PQVVAARSEVCIQTKVQITTDLW*MWTEEM
Trigger: CATCTCCTCAGTCCACATCCACCACAAGTCTGTTGT...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCACTGTCCCCAAGGGCTaGAACCTGTATCACAATGGA +
Preference number: 2 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLTVPKG*NLYHNG
Trigger: TCCATTGTGATACAGGTTCCAGCCCTTGGGGACAGT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTGTTCCTGGAAGCTGCTaGGGTTCCTCACCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: ITVRVSRPWKIGGEIGFGVPGSC*GSSPAE
Trigger: TTCAGCAGGTGAGGAACCCCAGCAGCTTCCAGGAAC...ACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTGTTCCTGGAAGCTGCTaGGGTTCCTCACCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: GVCKYGKKQEADKVISIGVPGSC*GSSPAE
Trigger: TTCAGCAGGTGAGGAACCCCAGCAGCTTCCAGGAAC...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGGTGTCCAGACCATaGAAAATTGGTGGAGAAATT +
Preference number: 2 (lower is better)
Translates to: TSSYSASWPRLSRRPARCRVSRP*KIGGEI
Trigger: AATTTCTCCACCAATTTTCCATGGTCTGGACACCCT...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCTTATGCATCGTGGACTaGGAGTCAAGAGACCCATTC +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCLCIVD*ESRDPF
Trigger: GAATGGGTCTCTTGACTCTCAGTCCACGATGCATAA...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR TCA 90 bp ATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTCGATTTCAGGTCGGGTaGACAGGGAAGCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: ITVRVSRPWKIGGEIGFGRFQVG*TGKHLL
Trigger: AAGGAGATGCTTCCCTGTTCACCCGACCTGAAATCG...ACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCARSEV*IQTKVQ
Trigger: TTGCACCTTTGTCTGGATGCACACTTCTGACCTTGC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLARSEV*IQTKVQ
Trigger: TTGCACCTTTGTCTGGATGCACACTTCTGACCTTGC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAGATTTGCCATGCATTTaGATCTTGCTACAGTTTGGT +
Preference number: 2 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKDLPCI*ILLQFG
Trigger: ACCAAACTGTAGCAAGATGCAAATGCATGGCAAATC...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACACGACAGGATTTGCCATaGATTTGCATCTTGCTACAG +
Preference number: 2 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTRQDLP*ICILLQ
Trigger: CTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCG...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR GCA 90 bp AAGGGCTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCGAGACCGACAGGATTTaGCATGCATTTGCATCTTGC +
Preference number: 2 (lower is better)
Translates to: KGWNLYHNGVIVDHTIKGETDRI*HAFASC
Trigger: GCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTC...GCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR GCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGGGGAGGTGGGGACTTaGTGCCTTCCTGCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: KFALRHFAVVYASMGRNRGEVGT*CLPAVS
Trigger: GGAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTCCAAAACAAAGTGTGTGCCATTCATCTTGGCCTTGCAGGTAGGATCCAACAGCAGGGCCCCAAATTATaGATGTTCTCACCTGGACAA +
Preference number: 2 (lower is better)
Translates to: LQNKVCAIHLGLAGRIQQQGPKL*MFSPGQ
Trigger: TTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTG...CTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 2 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLTGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGCCGCATCTCCTCACTaGTTCTACTATCTGGCTATT +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCAASPH*FYYLAI
Trigger: AATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLRPHRL*QQGQKC
Trigger: ACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: GVCKYGKKQEADKVISIGRPHRL*QQGQKC
Trigger: ACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCT...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTATTCAGATAACCAACTaGAGACCGACAGGATTTGCC +
Preference number: 2 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIIQITN*RPTGFA
Trigger: GGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAAT...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTCATTCAGATAACCAACTaGAGACCGACAGGATTTGCC +
Preference number: 2 (lower is better)
Translates to: DSPGNIWERKRKASILAFIQITN*RPTGFA
Trigger: GGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAAT...GAAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTCCAAAACAAAGTGTGTGCCATTCATCTTGGCCTTGCAGGTAGGATCCAACAGAACACAACAGACTTGTaGTGGATGTGGACTGAGGAG +
Preference number: 2 (lower is better)
Translates to: LQNKVCAIHLGLAGRIQQNTTDL*WMWTEE
Trigger: CTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTT...CTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACCTCTCCATCAAGGCCTaGACAGGATGGGAGGCACTG +
Preference number: 2 (lower is better)
Translates to: YKESLAASPHWFYYLAINLSIKA*TGWEAL
Trigger: CAGTGCCTCCCATCCTGTCCAGGCCTTGATGGAGAG...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR CCA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAAAGCTGGCCAGGCCCCTaGCCTGCAGTGCGGAGATTC +
Preference number: 2 (lower is better)
Translates to: LIFPHFNINVSCYLEFGESWPGP*PAVRRF
Trigger: GAATCTCCGCACTGCAGGCCAGGGGCCTGGCCAGCT...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR CAA 90 bp TCTCTAGGATGTGTCCCATGTATAGTGCGCTGCTTTCTGAATCTTTaGTGGGGAAGGGGTCCACTTACACAATTTCTGGAGTTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: SLGCVPCIVRCFLNL*WGRGPLTQFLEFQQ
Trigger: CTGCTGAAACTCCAGAAATTGTGTAAGTGGACCCCTTCCCCACAAAAGATTCAGAAAGCAGCGCACTATACATGGGACACATCCTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGTAAGGCAATCCAAATaGGTGCCCTTTTCCAATCTC +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCVRQSK*VPFSNL
Trigger: GAGATTGGAAAAGGGCACTCATTTGGATTGCCTTAC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGCTCTCTGTCTTCAGATaGCACACCAGGGGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWLSVFR*HTRGCG
Trigger: CCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAG...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAATGGATGTTCTCACCTaGACAAAGCAGCATTTTAAA +
Preference number: 2 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKMDVLT*TKQHFK
Trigger: TTTAAAATGCTGCTTTGTCCAGGTGAGAACATCCAT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGATGGATGTTCTCACCTaGACAAAGCAGCATTTTAAA +
Preference number: 2 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRMDVLT*TKQHFK
Trigger: TTTAAAATGCTGCTTTGTCCAGGTGAGAACATCCAT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCATGGATGTTCTCACCTaGACAAAGCAGCATTTTAAA +
Preference number: 2 (lower is better)
Translates to: WPRAQERNVALTLVRVQSMDVLT*TKQHFK
Trigger: TTTAAAATGCTGCTTTGTCCAGGTGAGAACATCCAT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 2 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRTGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGATATAAAGAATCTTTaGCCGCATCTCCTCACTGGT +
Preference number: 2 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIDIKNL*PHLLTG
Trigger: ACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TGGCCTCTGCAAATTAAGGGTGTAGCCTGCAGAAATAACAAAAGACTGCAGATAAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: WPLQIKGVACRNNKRLQIRPHRL*QQGQKC
Trigger: ACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCT...TATCTGCAGTCTTTTGTTATTTCTGCAGGCTACACCCTTAATTTGCAGAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCTTGACATATTTTGAGTaGAAACACTCACCCTACCAA +
Preference number: 2 (lower is better)
Translates to: WPRAQERNVALTLVRVQSLTYFE*KHSPYQ
Trigger: TTGGTAGGGTGAGTGTTTCCACTCAAAATATGTCAA...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCATTCAGATAACCAACTaGAGACCGACAGGATTTGCC +
Preference number: 2 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLIQITN*RPTGFA
Trigger: GGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAAT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCCCTATGTTGCACTTTaGAGGGAACACTTGATCTTC +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCPYVAL*REHLIF
Trigger: GAAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGG...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTTCCACCCTTCTGCTGCTTTaGGTTGAAGGTACTCAGCAA +
Preference number: 2 (lower is better)
Translates to: TVRVSRPWKIGGEIGFGSTLLLL*VEGTQQ
Trigger: TTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGT...GGAACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCTCCTCATTCTGGGGCTaGCTGGACATCACACACCCT +
Preference number: 2 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTSSFWG*LDITHP
Trigger: AGGGTGTGTGATGTCCAGCCAGCCCCAGAATGAGGA...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CCA 90 bp AAGGGCTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTCCCCGAGTAGCCACTaGCCTGAAAAGAATCTTTTT +
Preference number: 2 (lower is better)
Translates to: KGWNLYHNGVIVDHTIKGSPSSH*PEKNLF
Trigger: AAAAAGATTCTTTTCAGGCCAGTGGCTACTCGGGGA...GCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCTGGTTCCTTCATGCTTaGACCTTTTTCTTTAGATTC +
Preference number: 2 (lower is better)
Translates to: TSSYSASWPRLSRRPARCWFLHA*TFFFRF
Trigger: GAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCA...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 90 bp AGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTTTaGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAG +
Preference number: 2 (lower is better)
Translates to: SMGRNRKLIRSSALV*AQGTRKECCLNTCQ
Trigger: CTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTACAAGGAGGTATCACTaGGCTTATTTTAGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: PQVVAARSEVCIQTKVQITRRYH*AYFSCK
Trigger: TTTGCAGCTAAAATAAGCTCAGTGATACCTCCTTGT...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000533089.5
3UTR-3UTR TCA 90 bp AGACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTAGGAGCCATTGTGTATaGAGTTATTGGACTATAGCC +
Preference number: 2 (lower is better)
Translates to: RLSWKYLGKETEGLHFGLRSHCV*SYWTIA
Trigger: GGCTATAGTCCAATAACTTCATACACAATGGCTCCT...AAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCAGGAGCCATTGTGTATaGAGTTATTGGACTATAGCC +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCRSHCV*SYWTIA
Trigger: GGCTATAGTCCAATAACTTCATACACAATGGCTCCT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGATTTGCCATGCATTTaGATCTTGCTACAGTTTGGT +
Preference number: 2 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIDLPCI*ILLQFG
Trigger: ACCAAACTGTAGCAAGATGCAAATGCATGGCAAATC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACGGCAATCCAAATGAGTaGCCTTTTCCAATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: SDNQLETDRICHAFASCYGNPNE*PFPISA
Trigger: TGCTGAGATTGGAAAAGGGCACTCATTTGGATTGCC...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CTCCAAAACAAAGTGTGTGCCATTCATCTTGGCCTTGCAGGTAGGATCCAACAGATCTCCCATCTCCTCTaGATTATTTTCAAGCCGAAG +
Preference number: 2 (lower is better)
Translates to: LQNKVCAIHLGLAGRIQQISHLL*IIFKPK
Trigger: CTTCGGCTTGAAAATAATGCAGAGGAGATGGGAGAT...CTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGATATAAAGAATCTTTaGCCGCATCTCCTCACTGGT +
Preference number: 2 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLDIKNL*PHLLTG
Trigger: ACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACATTCAGATAACCAACTaGAGACCGACAGGATTTGCC +
Preference number: 2 (lower is better)
Translates to: SDNQLETDRICHAFASCYIQITN*RPTGFA
Trigger: GGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAAT...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTGACCCACTTACACAATTTCTaGAGTTTCAGCAGAGGCTCA +
Preference number: 2 (lower is better)
Translates to: LEPVSQWSYSRPHHQGLTHLHNF*SFSRGS
Trigger: TGAGCCTCTGCTGAAACTCCAGAAATTGTGTAAGTG...GGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTGACCTTTCTGAATCTTTTGTaGGGAAGGGGTCCACTTACA +
Preference number: 2 (lower is better)
Translates to: LEPVSQWSYSRPHHQGLTFLNLL*GRGPLT
Trigger: TGTAAGTGGACCCCTTCCCCACAAAAGATTCAGAAA...GGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAAATGACAGGGTCCTTTaGCCGAGGGAGCCCATCTTC +
Preference number: 2 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQNDRVL*PREPIF
Trigger: GAAGATGGGCTCCCTCGGCCAAAGGACCCTGTCATT...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CCA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGACAGAGAAGACGCCCTaGGAGGGCACCAAAAAGAGG +
Preference number: 2 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWTEKTP*EGTKKR
Trigger: CCTCTTTTTGGTGCCCTCCCAGGGCGTCTTCTCTGT...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTTTAGATTCTGCTTCATaGTGGATCACAGCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: GVCKYGKKQEADKVISIGLDSAS*WITARG
Trigger: GCCCCTTGCTGTGATCCACCATGAAGCAGAATCTAA...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTCAGACCATGGAAAATTaGTGGAGAAATTGGATTTGG +
Preference number: 2 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIQTMEN*WRNWIW
Trigger: CCAAATCCAATTTCTCCACCAATTTTCCATGGTCTG...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 90 bp TATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATaGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACT +
Preference number: 2 (lower is better)
Translates to: YASMGRNRKLIRSSA*VLAQGTRKECCLNT
Trigger: AGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCAAAATCCAGCCCTCTaGGTCTGGACACGAGGCTCA +
Preference number: 2 (lower is better)
Translates to: KFALRHFAVVYASMGRNRQNPAL*VWTRGS
Trigger: TGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGG +
Preference number: 2 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTPLPTP*VWVKLR
Trigger: CCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGG...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCAAATCCATTATCACCTaGCTCCAGATCTTCATAACC +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCKSIIT*LQIFIT
Trigger: GGTTATGAAGATCTGGAGTCAGGTGATAATGGATTT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGARSEV*IQTKVQ
Trigger: TTGCACCTTTGTCTGGATGCACACTTCTGACCTTGC...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGGGCAATCCAAATGAGTaGCCTTTTCCAATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLGNPNE*PFPISA
Trigger: TGCTGAGATTGGAAAAGGGCACTCATTTGGATTGCC...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTGGCAATCCAAATGAGTaGCCTTTTCCAATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: GVCKYGKKQEADKVISIGGNPNE*PFPISA
Trigger: TGCTGAGATTGGAAAAGGGCACTCATTTGGATTGCC...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACTCACCCAACAAAATGTaGTCTGTTAACACAACCAGC +
Preference number: 2 (lower is better)
Translates to: SDNQLETDRICHAFASCYSPNKM*SVNTTS
Trigger: GCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR GCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTAGGGACTCTGTAATTTaGCCCTCATCCTCCAAGAGT +
Preference number: 2 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTRDSVI*PSSSKS
Trigger: ACTCTTGGAGGATGAGGGGCAAATTACAGAGTCCCT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR GCA 90 bp TTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAATCACACACCCTTCTGCTaGTTTGGGTTGAAGGTACTC +
Preference number: 2 (lower is better)
Translates to: FFYSHDHLLIVTFDRQGNHTPFC*FGLKVL
Trigger: GAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTG...ATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTCATGGATGTTCTCACCTaGACAAAGCAGCATTTTAAA +
Preference number: 2 (lower is better)
Translates to: DSPGNIWERKRKASILAFMDVLT*TKQHFK
Trigger: TTTAAAATGCTGCTTTGTCCAGGTGAGAACATCCAT...GAAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTCAGGGCCCCAAATTATaGATGTTCTCACCTGGACAA +
Preference number: 2 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTQGPKL*MFSPGQ
Trigger: TTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTG...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 2 (lower is better)
Translates to: FWPRAQERNVALTLVRVQTGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ATTGTCACATTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGTTGACATATTTTGAGTaGAAACACTCACCCTACCAA +
Preference number: 2 (lower is better)
Translates to: IVTFDRQGNIHAPLHLFWLTYFE*KHSPYQ
Trigger: TTGGTAGGGTGAGTGTTTCCACTCAAAATATGTCAA...CCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACACAGACAATCTGCCTTaGAGTTTGGGGCATTTTAAC +
Preference number: 2 (lower is better)
Translates to: SDNQLETDRICHAFASCYTDNLP*SLGHFN
Trigger: GTTAAAATGCCCCAAACTCCAAGGCAGATTGTCTGT...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGAACCTGTATCACAATaGAGTTATAGTAGACCACAC +
Preference number: 2 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLEPVSQ*SYSRPH
Trigger: GTGTGGTCTACTATAACTCCATTGTGATACAGGTTC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGCCCTGGGTGTGGGGTaGATACAACGGGTGATCTTT +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFALGVG*IQRVIF
Trigger: AAAGATCACCCGTTGTATTCACCCCACACCCAGGGC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAAGCCCTGGGTGTGGGGTaGATACAACGGGTGATCTTT +
Preference number: 2 (lower is better)
Translates to: LIFPHFNINVSCYLEFGEALGVG*IQRVIF
Trigger: AAAGATCACCCGTTGTATTCACCCCACACCCAGGGC...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCTTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGA +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCFSFLT*ILVWYR
Trigger: TCTGTACCACACTAGAATTCATGTGAGAAAGCTAAA...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTGACCTTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGA +
Preference number: 2 (lower is better)
Translates to: LEPVSQWSYSRPHHQGLTFSFLT*ILVWYR
Trigger: TCTGTACCACACTAGAATTCATGTGAGAAAGCTAAA...GGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp TTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAATCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGG +
Preference number: 2 (lower is better)
Translates to: FFYSHDHLLIVTFDRQGNPLPTP*VWVKLR
Trigger: CCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGG...ATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTTTTGGAGGGAACACTTaGTCTTCCCCCACTTTAATA +
Preference number: 2 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVFGGNT*SSPTLI
Trigger: TATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAA...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR TCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTCAGATTCCCTTGGGTTaGAGGAATGTCATCTCTTAT +
Preference number: 2 (lower is better)
Translates to: GVCKYGKKQEADKVISIGQIPLG*RNVISY
Trigger: ATAAGAGATGACATTCCTTCAACCCAAGGGAATCTG...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAACCTCTTCTGGCTCTCTaGGACCAGGAAACAGTTGTA +
Preference number: 2 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQPLLAL*DQETVV
Trigger: TACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGG...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCATGGATGTTCTCACCTaGACAAAGCAGCATTTTAAA +
Preference number: 2 (lower is better)
Translates to: LIRSSALVLAQGTRKECCMDVLT*TKQHFK
Trigger: TTTAAAATGCTGCTTTGTCCAGGTGAGAACATCCAT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CAA 90 bp ATGAGACATCCTATCAGGGTTCGAATATGGAGAGATAAAGCACGTTaGGATGGCAAATCCCAGTTCTTGTTCAGCCTTAGTAACAGATAC +
Preference number: 2 (lower is better)
Translates to: MRHPIRVRIWRDKAR*DGKSQFLFSLSNRY
Trigger: GTATCTGTTACTAAGGCTGAACAAGAACTGGGATTTGCCATCCAAACGTGCTTTATCTCTCCATATTCGAACCCTGATAGGATGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR CCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACAGGGCCCCAAATTATaGATGTTCTCACCTGGACAA +
Preference number: 2 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLQGPKL*MFSPGQ
Trigger: TTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGGCCGCATCTCCTCACTaGTTCTACTATCTGGCTATT +
Preference number: 2 (lower is better)
Translates to: FALRHFAVVYASMGRNRKAASPH*FYYLAI
Trigger: AATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGC...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TGGCCTCTGCAAATTAAGGGTGTAGCCTGCAGAAATAACAAAAGACTGCAGATAGATATAAAGAATCTTTaGCCGCATCTCCTCACTGGT +
Preference number: 2 (lower is better)
Translates to: WPLQIKGVACRNNKRLQIDIKNL*PHLLTG
Trigger: ACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATC...TATCTGCAGTCTTTTGTTATTTCTGCAGGCTACACCCTTAATTTGCAGAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CCA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTATGGGCACAAATCTGTaGTTCCTGATTTTGGTCATT +
Preference number: 2 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLMGTNL*FLILVI
Trigger: AATGACCAAAATCAGGAACCACAGATTTGTGCCCAT...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAACAGTTGTGCCTCTGCTaGCACAGCCTGACAAAACAG +
Preference number: 2 (lower is better)
Translates to: LIFPHFNINVSCYLEFGEQLCLC*HSLTKQ
Trigger: CTGTTTTGTCAGGCTGTGCCAGCAGAGGCACAACTG...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR CAA 90 bp CGAATATGGAGAGATAAAGCACGTTTGGATGGCAAATCCCAGTTCTaGTTCAGCCTTAGTAACAGATACCTCAACATAAACGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: RIWRDKARLDGKSQF*FSLSNRYLNINVSI
Trigger: AATGGACACGTTTATGTTGAGGTATCTGTTACTAAGGCTGAACAAGAACTGGGATTTGCCATCCAAACGTGCTTTATCTCTCCATATTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR TCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGTTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGA +
Preference number: 2 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLFSFLT*ILVWYR
Trigger: TCTGTACCACACTAGAATTCATGTGAGAAAGCTAAA...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGG +
Preference number: 2 (lower is better)
Translates to: KFALRHFAVVYASMGRNRPLPTP*VWVKLR
Trigger: CCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTTGAGTTCGGTGAATaGAGTAACTGCTCCATACTC +
Preference number: 2 (lower is better)
Translates to: FALRHFAVVYASMGRNRKLEFGE*SNCSIL
Trigger: GAGTATGGAGCAGTTACTTCATTCACCGAACTCAAG...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGAGCAAGGTAATTGAGTaGGAGAAAATTCTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLSKVIE*EKILPY
Trigger: ATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp TTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAATCAGATTCCCTTGGGTTaGAGGAATGTCATCTCTTAT +
Preference number: 2 (lower is better)
Translates to: FFYSHDHLLIVTFDRQGNQIPLG*RNVISY
Trigger: ATAAGAGATGACATTCCTTCAACCCAAGGGAATCTG...ATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCTTTTCAAGCCGAAGATaGAATCTATTAGCCACAGGA +
Preference number: 2 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGFSSRR*NLLATG
Trigger: TCCTGTGGCTAATAGATTTCATCTTCGGCTTGAAAA...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGCCAAAACAAAGTGTGTaGCATTCATCTTGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWPKQSV*HSSWPC
Trigger: GCAAGGCCAAGATGAATGGCACACACTTTGTTTTGG...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 2 (lower is better)
Translates to: GVCKYGKKQEADKVISIGTGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTGACTTGTGGTGGATGTaGACTGAGGAGATGGGATTC +
Preference number: 2 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSDLWWM*TEEMGF
Trigger: GAATCCCATCTCCTCAGTCCACATCCACCACAAGTC...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGTTAGATTCTGCTTCATaGTGGATCACAGCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: KFALRHFAVVYASMGRNRLDSAS*WITARG
Trigger: GCCCCTTGCTGTGATCCACCATGAAGCAGAATCTAA...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAGATGTTCATTTCCATaGGGGAAGTTCCTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGRCSFP*GKFLSS
Trigger: AGAAGAAAGGAACTTCCCCCATGGAAATGAACATCT...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGG +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFPLPTP*VWVKLR
Trigger: CCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGG...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFARSEV*IQTKVQ
Trigger: TTGCACCTTTGTCTGGATGCACACTTCTGACCTTGC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATTGCATTAAGACATTTTaGAGTGGTGTATGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHCIKTF*SGVCKY
Trigger: ATACTTGCATACACCACTGCAAAATGTCTTAATGCA...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTCAGGGCCCCAAATTATaGATGTTCTCACCTGGACAA +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFQGPKL*MFSPGQ
Trigger: TTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTG...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp CACCACATGGTGAAAAGCTATAGCGTATTATACAGACAATCTGCCTTGGAGTTTATGGGCACAAATCTGTaGTTCCTGATTTTGGTCATT +
Preference number: 2 (lower is better)
Translates to: HHMVKSYSVLYRQSALEFMGTNL*FLILVI
Trigger: AATGACCAAAATCAGGAACCACAGATTTGTGCCCAT...AAACTCCAAGGCAGATTGTCTGTATAATACGCTATAGCTTTTCACCATGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CCA 90 bp TGGCCTCTGCAAATTAAGGGTGTAGCCTGCAGAAATAACAAAAGACTGCAGATATGGTTCCTTCATGCTTaGACCTTTTTCTTTAGATTC +
Preference number: 2 (lower is better)
Translates to: WPLQIKGVACRNNKRLQIWFLHA*TFFFRF
Trigger: GAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCA...TATCTGCAGTCTTTTGTTATTTCTGCAGGCTACACCCTTAATTTGCAGAGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR CAA 90 bp GCACTTCAAGATCAGGATGAGATTTTTGACCACTTCAAGATCCTCTaGAGAAGGTCTTATATCAATTGTTATATCCACCTGGAAAGCACT +
Preference number: 2 (lower is better)
Translates to: ALQDQDEIFDHFKIL*RRSYINCYIHLEST
Trigger: AGTGCTTTCCAGGTGGATATAACAATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGATCTTGAAGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCATTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGA +
Preference number: 2 (lower is better)
Translates to: QASLNIKRFDHPVDRLFAFSFLT*ILVWYR
Trigger: TCTGTACCACACTAGAATTCATGTGAGAAAGCTAAA...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGTAAGGCAATCCAAATaGGTGCCCTTTTCCAATCTC +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFVRQSK*VPFSNL
Trigger: GAGATTGGAAAAGGGCACTCATTTGGATTGCCTTAC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGACTCAGCAAGGTAATTaGGTGAGAGAAAATTCTTCC +
Preference number: 2 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWTQQGN*VRENSS
Trigger: GGAAGAATTTTCTCTCACTCAATTACCTTGCTGAGT...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGGATTTGCCATGCATTTaGATCTTGCTACAGTTTGGT +
Preference number: 2 (lower is better)
Translates to: FALRHFAVVYASMGRNRKDLPCI*ILLQFG
Trigger: ACCAAACTGTAGCAAGATGCAAATGCATGGCAAATC...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGATGGGCACAAATCTGTaGTTCCTGATTTTGGTCATT +
Preference number: 2 (lower is better)
Translates to: FALRHFAVVYASMGRNRKMGTNL*FLILVI
Trigger: AATGACCAAAATCAGGAACCACAGATTTGTGCCCAT...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTATCAGGATTACCTACTaGGGTTCCATTCACAGACAA +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFIRITY*GSIHRQ
Trigger: TTGTCTGTGAATGGAACCTCAGTAGGTAATCCTGAT...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR TCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGAGCAAGGTAATTGAGTaGGAGAAAATTCTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: FALRHFAVVYASMGRNRKSKVIE*EKILPY
Trigger: ATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCT...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTTGCATTAAGACATTTTaGAGTGGTGTATGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: RICHAFASCYSLVFMKGPCIKTF*SGVCKY
Trigger: ATACTTGCATACACCACTGCAAAATGTCTTAATGCA...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTCCATGTATAGTGCGCTaGTTTCTGAATCTTTTGTGG +
Preference number: 2 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSPCIVR*FLNLLW
Trigger: CCACAAAAGATTCAGAAAGCAGCGCACTATACATGG...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTTGGAGAAATTGGATTTaGTTCCTTCATGCTTGGACC +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFWRNWI*FLHAWT
Trigger: GGTCCAAGCATGAAGGAACCAAATCCAATTTCTCCA...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTACTCAGCAAGGTAATTaGGTGAGAGAAAATTCTTCC +
Preference number: 2 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSTQQGN*VRENSS
Trigger: GGAAGAATTTTCTCTCACTCAATTACCTTGCTGAGT...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTACAAGAAAGGAATGTTaGCTTAACACTTGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFTRKEC*LNTCQG
Trigger: ACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGT...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTTTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGA +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFFSFLT*ILVWYR
Trigger: TCTGTACCACACTAGAATTCATGTGAGAAAGCTAAA...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CCA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAAACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 2 (lower is better)
Translates to: LIFPHFNINVSCYLEFGETGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR GCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTTGCATTAAGACATTTTaGAGTGGTGTATGCAAGTAT +
Preference number: 2 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFCIKTF*SGVCKY
Trigger: ATACTTGCATACACCACTGCAAAATGTCTTAATGCA...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR GCA 72 bp GGCCGGGTTGGGCTGGGTTGGGCTAGGCCGTGCTGCTaGTGGAGCAAGGCGTGCTCTGCGTGCTGCCGATGC +
Preference number: 3 (lower is better)
Translates to: GRVGLGWARPCC*WSKACSACCRC
Trigger: GCATCGGCAGCACGCAGAGCACGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCAACCCAGCCCAACCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGCGGAAGGCCTCCATTTaGGCCTTCCCCTCCCCGGAT +
Preference number: 3 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSERKASI*AFPSPD
Trigger: ATCCGGGGAGGGGAAGGCCAAAATGGAGGCCTTCCG...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp CATCAAGGCCTGGACAGGATGGGAGGCACTGACAGGTaGCAGTTCACACAGTGCACCAGGCTCTGGACCTGT +
Preference number: 3 (lower is better)
Translates to: HQGLDRMGGTDR*QFTQCTRLWTC
Trigger: ACAGGTCCAGAGCCTGGTGCACTGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR TCA 72 bp CTGTGGCAGCCCAGTTGTGCCTCTGCTGGCACAGCCTaGCAAAACAGTGAAGCTCTCCATCAAGGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: LWQPSCASAGTA*QNSEALHQGLD
Trigger: GTCCAGGCCTTGATGGAGAGCTTCACTGTTTTGTCAGGCTGTGCCAGCAGAGGCACAACTGGGCTGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR CAA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGCCATTGGTCCTGCCCTaGGCAGTAGCTGAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: SSVVQKPRVMFILALGVGPLVLP*AVAELS
Trigger: GCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGG...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGCACGAGGCTCAGCCATaGGTCCTGCCCTTGGCAGTA +
Preference number: 3 (lower is better)
Translates to: SSVVQKPRVMFILALGVGHEAQP*VLPLAV
Trigger: TACTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTG...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp CACAATGGAGTTATAGTAGACCACACCATCAAGGGCTaGCCACCGGGGCCGAGTACCGCAGCCATTCAGAGG +
Preference number: 3 (lower is better)
Translates to: HNGVIVDHTIKG*PPGPSTAAIQR
Trigger: CCTCTGAATGGCTGCGGTACTCGGCCCCGGTGGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAACCATTGGTCCTGCCCTaGGCAGTAGCTGAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKPLVLP*AVAELS
Trigger: GCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGG...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATCCATTGGTCCTGCCCTaGGCAGTAGCTGAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNPLVLP*AVAELS
Trigger: GCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGG...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGAGATATAAAGAATCTTaGGCCGCATCTCCTCACTGG +
Preference number: 3 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQRYKES*AASPHW
Trigger: CCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCT...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGGTGGAGAAATTGGATTaGGTTCCTTCATGCTTGGAC +
Preference number: 3 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQVEKLD*VPSCLD
Trigger: GTCCAAGCATGAAGGAACCAAATCCAATTTCTCCAC...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCCTGTGGCAGCCCAGTaGTGCCTCTGCTGGCACAGC +
Preference number: 3 (lower is better)
Translates to: LIRSSALVLAQGTRKECCPVAAQ*CLCWHS
Trigger: GCTGTGCCAGCAGAGGCACAACTGGGCTGCCACAGG...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR TCA 72 bp GGCTGTTCCTGGAAGCTGCTGGGGTTCCTCACCTGCTaGAGGCTGCAATTAAACACCACGATTTCAGGTCGG +
Preference number: 3 (lower is better)
Translates to: GCSWKLLGFLTC*RLQLNTTISGR
Trigger: CCGACCTGAAATCGTGGTGTTTAATTGCAGCCTTCAGCAGGTGAGGAACCCCAGCAGCTTCCAGGAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR GCA 72 bp TCGTCAGGAGGCACACACTTAGGCAACTTCTGGGGGTaGTTCTCCATCTTCGTACACAGCGTCAGCTCACAC +
Preference number: 3 (lower is better)
Translates to: SSGGTHLGNFWG*FSIFVHSVSSH
Trigger: GTGTGAGCTGACGCTGTGTACGAAGATGGAGAAGCACCCCCAGAAGTTGCCTAAGTGTGTGCCTCCTGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 72 bp GCACCCATCAAGGGACACATCAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGG +
Preference number: 3 (lower is better)
Translates to: APIKGHIRPHRL*QQGQKCASRQR
Trigger: CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGTGTCCCTTGATGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGCCATTGGTCCTGCCCTaGGCAGTAGCTGAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: FWPRAQERNVALTLVRVQPLVLP*AVAELS
Trigger: GCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGG...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGCACGAGGCTCAGCCATaGGTCCTGCCCTTGGCAGTA +
Preference number: 3 (lower is better)
Translates to: FWPRAQERNVALTLVRVQHEAQP*VLPLAV
Trigger: TACTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTG...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCACCATTCATCTTGGCCTaGCAGGTAGGATCCAACAGG +
Preference number: 3 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPPFILA*QVGSNR
Trigger: CCTGTTGGATCCTACCTGCAAGGCCAAGATGAATGG...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR GCA 72 bp GCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTaGCTTAACACTTGTCAGGGTGCAGTCCCTGAGGGC +
Preference number: 3 (lower is better)
Translates to: ALVLAQGTRKEC*LNTCQGAVPEG
Trigger: GCCCTCAGGGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CCA 72 bp AAGTCTCTCTGTCTTCAGATGCCACACCAGGGGGTGTaGGGAGTTGAGCAGGAACACAACAGACTTGTGGTG +
Preference number: 3 (lower is better)
Translates to: KSLCLQMPHQGV*GVEQEHNRLVV
Trigger: CACCACAAGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 72 bp AGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTaGCTCTCTGAGACCAGGAAACAGTTGTATGCTGGG +
Preference number: 3 (lower is better)
Translates to: RQGNIHAPLHLF*LSETRKQLYAG
Trigger: CCCAGCATACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTATCATCAGCATTGGTTTaGGCCCAGGGCACAAGAAAG +
Preference number: 3 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLSSALV*AQGTRK
Trigger: CTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGA...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGATCAGGATGAGATTTTaGACCACTTCAAGATCCTCT +
Preference number: 3 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQIRMRF*TTSRSS
Trigger: AGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGAT...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp GAGCAGGAACACAACAGACTTGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTGAAGTGTGACCACACC +
Preference number: 3 (lower is better)
Translates to: EQEHNRLVVDVD*GDGIQVKCDHT
Trigger: GGTGTGGTCACACTTCACCTGAATCCCATCTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR CCA 72 bp AGGAAACAGTTGTATGCTGGGAATGACAGGGTCCTTTaGCCGAGGGAGCCCATCTTCTCCCTCTTCATTCCA +
Preference number: 3 (lower is better)
Translates to: RKQLYAGNDRVL*PREPIFSLFIP
Trigger: TGGAATGAAGAGGGAGAAGATGGGCTCCCTCGGCCAAAGGACCCTGTCATTCCCAGCATACAACTGTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCGGAGACCGACAGGATTaGCCATGCATTTGCATCTTG +
Preference number: 3 (lower is better)
Translates to: WPRAQERNVALTLVRVQSGDRQD*PCICIL
Trigger: CAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCC...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCACGAGGCTCAGCCATaGGTCCTGCCCTTGGCAGTA +
Preference number: 3 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHHEAQP*VLPLAV
Trigger: TACTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GAGAATAGATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGTTGTATAGCTCCATGTaGAAGGTGATGTTTCCGTGG +
Preference number: 3 (lower is better)
Translates to: ENRCTTRPPSGVLRSQRLLYSSM*KVMFPW
Trigger: CCACGGAAACATCACCTTCAACATGGAGCTATACAA...CAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATCTATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp GAGCAGGAACACAACAGACTTGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTGAAGTGTGACCTCTCT +
Preference number: 3 (lower is better)
Translates to: EQEHNRLVVDVD*GDGIQVKCDLS
Trigger: AGAGAGGTCACACTTCACCTGAATCCCATCTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR GCA 72 bp CAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAAATTAGACAGGAGGAT +
Preference number: 3 (lower is better)
Translates to: QTPQVVAARSEV*IQTKVQIRQED
Trigger: ATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR GCA 72 bp TCACATTTGACAGACAGGGCAATATCCACGCTCCCTTaGACCTCTTCTGGCTCTCTGAGACCAGGAAACAGT +
Preference number: 3 (lower is better)
Translates to: SHLTDRAISTLP*TSSGSLRPGNS
Trigger: ACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR GCA 72 bp ATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTaGATCATGGCCCAGATTATCGAGGCGTCCAGCGAG +
Preference number: 3 (lower is better)
Translates to: ITARGLVNVFLF*IMAQIIEASSE
Trigger: CTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAACCCTTTACCAACTCCTaGAGTCTGGGTAAAACTCAG +
Preference number: 3 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKPFTNS*SLGKTQ
Trigger: CTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGG...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAAGATATAAAGAATCTTaGGCCGCATCTCCTCACTGG +
Preference number: 3 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKRYKES*AASPHW
Trigger: CCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTATAAGGTCATCAGCATaGGTTTTGGCCCAGGGCACA +
Preference number: 3 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIIRSSA*VLAQGT
Trigger: TGTGCCCTGGGCCAAAACCAATGCTGATGACCTTAT...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CTTGGCCTTGCAGGTAGGATCCAACAGGGTGACGTCCATCCCCGAGTAGCCACTCCATGCATTTGCATCTaGCTACAGTTTGGTTTTTAT +
Preference number: 3 (lower is better)
Translates to: LGLAGRIQQGDVHPRVATPCICI*LQFGFY
Trigger: ATAAAAACCAAACTGTAGCAAGATGCAAATGCATGG...AGTGGCTACTCGGGGATGGACGTCACCCTGTTGGATCCTACCTGCAAGGCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGGGATTTGCCATGCATTaGCATCTTGCTACAGTTTGG +
Preference number: 3 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSEGFAMH*HLATVW
Trigger: CCAAACTGTAGCAAGATGCAAATGCATGGCAAATCC...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CAA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCCTTTGGAGGGAACACTaGATCTTCCCCCACTTTAAT +
Preference number: 3 (lower is better)
Translates to: TSSYSASWPRLSRRPARCLWREH*IFPHFN
Trigger: ATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAAG...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCCAGTTGACAGACTTTTaGCACTTCAAGATCAGGATG +
Preference number: 3 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFQLTDF*HFKIRM
Trigger: CATCCTGATCTTGAAGTGCAAAAAGTCTGTCAACTG...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGATTTGATCACCCAGTaGACAGACTTTTTGCACTTC +
Preference number: 3 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLDLITQ*TDFLHF
Trigger: GAAGTGCAAAAAGTCTGTCAACTGGGTGATCAAATC...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCAATATCCACGCTCCCTaGCACCTCTTCTGGCTCTCT +
Preference number: 3 (lower is better)
Translates to: ASWWITARGLVNVFLFCINIHAP*HLFWLS
Trigger: AGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATT...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACCACGAGGCTCAGCCATaGGTCCTGCCCTTGGCAGTA +
Preference number: 3 (lower is better)
Translates to: YKESLAASPHWFYYLAINHEAQP*VLPLAV
Trigger: TACTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTG...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGCCCTTTACCAACTCCTaGAGTCTGGGTAAAACTCAG +
Preference number: 3 (lower is better)
Translates to: FWPRAQERNVALTLVRVQPFTNS*SLGKTQ
Trigger: CTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGG...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAGCATCTTGCTACAGTTaGGTTTTTATGAAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKASCYS*VFMKGP
Trigger: AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGC...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGAGGAACACAACAGACTaGTGGTGGATGTGGACTGAG +
Preference number: 3 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIERNTTD*WWMWTE
Trigger: CTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCT...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GTGAACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGCTTTGGAGGGAACACTaGATCTTCCCCCACTTTAAT +
Preference number: 3 (lower is better)
Translates to: VNVFLFCIMAQIIEASSELWREH*IFPHFN
Trigger: ATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAAG...CTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGAGACCAGGAAACAGTaGTATGCTGGGAATGACAGG +
Preference number: 3 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLETRKQ*YAGNDR
Trigger: CCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCACGATCATCTTCTCATaGTCACATTTGACAGACAGG +
Preference number: 3 (lower is better)
Translates to: WPRAQERNVALTLVRVQSTIIFS*SHLTDR
Trigger: CCTGTCTGTCAAATGTGACAATGAGAAGATGATCGT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGTTGTATAGCTCCATGTaGAAGGTGATGTTTCCGTGG +
Preference number: 3 (lower is better)
Translates to: QTQCPSRLGCPDHGKLVELYSSM*KVMFPW
Trigger: CCACGGAAACATCACCTTCAACATGGAGCTATACAA...CTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCCCAGACCATGGAAAATaGGTGGAGAAATTGGATTTG +
Preference number: 3 (lower is better)
Translates to: WPRAQERNVALTLVRVQSPDHGK*VEKLDL
Trigger: CAAATCCAATTTCTCCACCAATTTTCCATGGTCTGG...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 72 bp ATAACCATCTGGCCAACCACTACTGTCCCCAAGGGCTaGAACCTGTATCACAATGGAGTTATAGTAGACCAC +
Preference number: 3 (lower is better)
Translates to: ITIWPTTTVPKG*NLYHNGVIVDH
Trigger: GTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTTGGGGACAGTAGTGGTTGGCCAGATGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACTCATCAGCATTGGTTTaGGCCCAGGGCACAAGAAAG +
Preference number: 3 (lower is better)
Translates to: SDNQLETDRICHAFASCYSSALV*AQGTRK
Trigger: CTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGA...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACGGAGACCGACAGGATTaGCCATGCATTTGCATCTTG +
Preference number: 3 (lower is better)
Translates to: SDNQLETDRICHAFASCYGDRQD*PCICIL
Trigger: CAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCC...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTAATCTGCCTTGGAGTTaGGGGCATTTTAACAACAGC +
Preference number: 3 (lower is better)
Translates to: PQVVAARSEVCIQTKVQINLPWS*GHFNNS
Trigger: GCTGTTGTTAAAATGCCCCAAACTCCAAGGCAGATT...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CAA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGTGGAGAAATTGGATTaGGTTCCTTCATGCTTGGAC +
Preference number: 3 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIVEKLD*VPSCLD
Trigger: GTCCAAGCATGAAGGAACCAAATCCAATTTCTCCAC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATTGTCACATTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGGCATCTTGCTACAGTTaGGTTTTTATGAAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: IVTFDRQGNIHAPLHLFWASCYS*VFMKGP
Trigger: AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGC...CCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTGGAGACCGACAGGATTaGCCATGCATTTGCATCTTG +
Preference number: 3 (lower is better)
Translates to: GVCKYGKKQEADKVISIGGDRQD*PCICIL
Trigger: CAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCC...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTGACCTCCCTATGTTGCACTTaGGAGGGAACACTTGATCTT +
Preference number: 3 (lower is better)
Translates to: LEPVSQWSYSRPHHQGLTSLCCT*EGTLDL
Trigger: AAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGGA...GGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CTCCAAAACAAAGTGTGTGCCATTCATCTTGGCCTTGCAGGTAGGATCCAACAGTCCCTATGTTGCACTTaGGAGGGAACACTTGATCTT +
Preference number: 3 (lower is better)
Translates to: LQNKVCAIHLGLAGRIQQSLCCT*EGTLDL
Trigger: AAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGGA...CTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp GCTGGTGGAGAAGACCACCATTTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGAAGCCCAGGGTCATGT +
Preference number: 3 (lower is better)
Translates to: AGGEDHHFSFLT*ILVWYRSPGSC
Trigger: ACATGACCCTGGGCTTCTGTACCACACTAGAATTCATGTGAGAAAGCTAAAATGGTGGTCTTCTCCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp TTTCTACAGCCACGATCATCTTCTCATTGTCACATTTaGCAGACAGGGCAATATCCACGCTCCCTTGCACCT +
Preference number: 3 (lower is better)
Translates to: FLQPRSSSHCHI*QTGQYPRSLAP
Trigger: AGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 72 bp AATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTaGCTATTAACCCTTTACCAACTCCTTGAGTCTGGG +
Preference number: 3 (lower is better)
Translates to: NLWPHLLTGSTI*LLTLYQLLESG
Trigger: CCCAGACTCAAGGAGTTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CCA 72 bp CATTCAAACCATGAGGTAGTTACAGTACAAAAAGACTaGCACGCGTGTGAGCACCCCACACACACTCACAAT +
Preference number: 3 (lower is better)
Translates to: HSNHEVVTVQKD*HACEHPTHTHN
Trigger: ATTGTGAGTGTGTGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTTTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTCCATTGGTCCTGCCCTaGGCAGTAGCTGAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFPLVLP*AVAELS
Trigger: GCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGG...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTCACGAGGCTCAGCCATaGGTCCTGCCCTTGGCAGTA +
Preference number: 3 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSHEAQP*VLPLAV
Trigger: TACTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTG...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCCCTTTACCAACTCCTaGAGTCTGGGTAAAACTCAG +
Preference number: 3 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHPFTNS*SLGKTQ
Trigger: CTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGCTTTCTGAATCTTTaGTGGGGAAGGGGTCCACTT +
Preference number: 3 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVCFLNL*WGRGPL
Trigger: AAGTGGACCCCTTCCCCACAAAAGATTCAGAAAGCA...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGTTCTGCTGCTTTGGGTaGAAGGTACTCAGCAAGGTA +
Preference number: 3 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLFCCFG*KVLSKV
Trigger: TACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAA...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GTGAACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGCACTTCAAGATCCTCTaGAGAAGGTCTTATATCAAT +
Preference number: 3 (lower is better)
Translates to: VNVFLFCIMAQIIEASSEHFKIL*RRSYIN
Trigger: ATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTG...CTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACAATCAGGATGAGATTTTaGACCACTTCAAGATCCTCT +
Preference number: 3 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTIRMRF*TTSRSS
Trigger: AGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGAT...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CAA 90 bp AGACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTGATTTGATCACCCAGTaGACAGACTTTTTGCACTTC +
Preference number: 3 (lower is better)
Translates to: RLSWKYLGKETEGLHFGLDLITQ*TDFLHF
Trigger: GAAGTGCAAAAAGTCTGTCAACTGGGTGATCAAATC...AAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GTGAACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGTTGTGTATGAAGTTATaGGACTATAGCCATTGTCCA +
Preference number: 3 (lower is better)
Translates to: VNVFLFCIMAQIIEASSELCMKL*DYSHCP
Trigger: TGGACAATGGCTATAGTCCAATAACTTCATACACAA...CTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCGAGACCAGGAAACAGTaGTATGCTGGGAATGACAGG +
Preference number: 3 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGETRKQ*YAGNDR
Trigger: CCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTC...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTTCCCTGTCAAGGAGAAGTTaGCTGATGAAAACTGGACCA +
Preference number: 3 (lower is better)
Translates to: TVRVSRPWKIGGEIGFGSLSRRS*LMKTGP
Trigger: TGGTCCAGTTTTCATCAGCAAACTTCTCCTTGACAG...GGAACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR TCA 72 bp TCCTTCATCCATATCTCCCGGAAATCCATTATCACCTaGCTCCAGATCTTCATAACCATCTGGCCAACCACT +
Preference number: 3 (lower is better)
Translates to: SFIHISRKSIIT*LQIFITIWPTT
Trigger: AGTGGTTGGCCAGATGGTTATGAAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 72 bp GTCCCATGTATAGTGCGCTGCTTTCTGAATCTTTTGTaGGGAAGGGGTCCACTTACACAATTTCTGGAGTTT +
Preference number: 3 (lower is better)
Translates to: VPCIVRCFLNLL*GRGPLTQFLEF
Trigger: AAACTCCAGAAATTGTGTAAGTGGACCCCTTCCCCACAAAAGATTCAGAAAGCAGCGCACTATACATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CAA 90 bp GACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTCCTGTGGTTCCTGATTTaGGTCATTTTCAATTTCTGT +
Preference number: 3 (lower is better)
Translates to: DSPGNIWERKRKASILAFLWFLI*VIFNFC
Trigger: ACAGAAATTGAAAATGACCAAAATCAGGAACCACAG...GAAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACGCATCTTGCTACAGTTaGGTTTTTATGAAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: SDNQLETDRICHAFASCYASCYS*VFMKGP
Trigger: AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGC...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACACCATGCATTTGCATCTaGCTACAGTTTGGTTTTTAT +
Preference number: 3 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTPCICI*LQFGFY
Trigger: ATAAAAACCAAACTGTAGCAAGATGCAAATGCATGG...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGAATCTCAGCACTGTCTaGGTGGAATTGGTGACACTA +
Preference number: 3 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLNLSTV*VELVTL
Trigger: TAGTGTCACCAATTCCACCAAGACAGTGCTGAGATT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTAGGGGGTGTGGGGAGTaGAGCAGGAACACAACAGAC +
Preference number: 3 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSRGCGE*SRNTTD
Trigger: GTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCT...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTAGAGATAAAGCACGTTaGGATGGCAAATCCCAGTTC +
Preference number: 3 (lower is better)
Translates to: ITVRVSRPWKIGGEIGFGRDKAR*DGKSQF
Trigger: GAACTGGGATTTGCCATCCAAACGTGCTTTATCTCT...ACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR CCA 72 bp CTTGGTGGAATTGGTGACACTATTCAGATAACCAACTaGAGACCGACAGGATTTGCCATGCATTTGCATCTT +
Preference number: 3 (lower is better)
Translates to: LGGIGDTIQITN*RPTGFAMHLHL
Trigger: AAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAATTCCACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR CCA 72 bp TCTTTTCGGGCCCAATTTAACAGATGTTCATTTCCATaGGGGAAGTTCCTTTCTTATGCATCGTGGACTGAG +
Preference number: 3 (lower is better)
Translates to: SFRAQFNRCSFP*GKFLSYASWTE
Trigger: CTCAGTCCACGATGCATAAGAAAGGAACTTCCCCCATGGAAATGAACATCTGTTAAATTGGGCCCGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR CCA 72 bp TTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATaGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTC +
Preference number: 3 (lower is better)
Translates to: FMLGPFSLDSAS*WITARGLVNVF
Trigger: GAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCACCCTTTACCAACTCCTaGAGTCTGGGTAAAACTCAG +
Preference number: 3 (lower is better)
Translates to: QASLNIKRFDHPVDRLFAPFTNS*SLGKTQ
Trigger: CTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGG...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGGGGTAGAATCTATCTaGTTCTACTTATGGAATTCT +
Preference number: 3 (lower is better)
Translates to: LIRSSALVLAQGTRKECCGVESI*FYLWNS
Trigger: AGAATTCCATAAGTAGAACAAGATAGATTCTACCCC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGAGGAACACAACAGACTaGTGGTGGATGTGGACTGAG +
Preference number: 3 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWRNTTD*WWMWTE
Trigger: CTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCT...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGAAATTCTTCCCTATGTaGCACTTTGGAGGGAACACT +
Preference number: 3 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLKFFPM*HFGGNT
Trigger: AGTGTTCCCTCCAAAGTGCAACATAGGGAAGAATTT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTTTCTCATTGTCACATTaGACAGACAGGGCAATATCC +
Preference number: 3 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLFSLSH*TDRAIS
Trigger: GGATATTGCCCTGTCTGTCAAATGTGACAATGAGAA...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp TTCTACTATCTGGCTATTAACCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGGGCCCCAAATTATGGA +
Preference number: 3 (lower is better)
Translates to: FYYLAINPLPTP*VWVKLRAPNYG
Trigger: TCCATAATTTGGGGCCCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGGTTAATAGCCAGATAGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp TGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGTaGGAGAAAATTCTTCCCTATGTTGCACTTTGGAGG +
Preference number: 3 (lower is better)
Translates to: CFGLKVLSKVIE*EKILPYVALWR
Trigger: CCTCCAAAGTGCAACATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp CTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTaGGTGAGAGAAAATTCTTCCCTATGTTGCACTTTG +
Preference number: 3 (lower is better)
Translates to: LLLWVEGTQQGN*VRENSSLCCTL
Trigger: CAAAGTGCAACATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CCA 72 bp AATGGTGTAATGAGACATCCTATCAGGGTTCGAATATaGAGAGATAAAGCACGTTTGGATGGCAAATCCCAG +
Preference number: 3 (lower is better)
Translates to: NGVMRHPIRVRI*RDKARLDGKSQ
Trigger: CTGGGATTTGCCATCCAAACGTGCTTTATCTCTCCATATTCGAACCCTGATAGGATGTCTCATTACACCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR-3UTR CAA 90 bp CACCACATGGTGAAAAGCTATAGCGTATTATACAGACAATCTGCCTTGGAGTTTAATCTCAGCACTGTCTaGGTGGAATTGGTGACACTA +
Preference number: 3 (lower is better)
Translates to: HHMVKSYSVLYRQSALEFNLSTV*VELVTL
Trigger: TAGTGTCACCAATTCCACCAAGACAGTGCTGAGATT...AAACTCCAAGGCAGATTGTCTGTATAATACGCTATAGCTTTTCACCATGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGAAAAAGAGGTCAGTGTaGTATAGCTCCATGTTGAAG +
Preference number: 3 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLKKRSV*YSSMLK
Trigger: CTTCAACATGGAGCTATACAACACTGACCTCTTTTT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGGTGTTGAAGACAGGCTaGAAGACAAAGCTGAATCGC +
Preference number: 3 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWVLKTG*KTKLNR
Trigger: GCGATTCAGCTTTGTCTTCAAGCCTGTCTTCAACAC...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532540.5
3UTR TCA 72 bp TTAACACAACCAGCAGTACAATCATCATTCAAACCATaGGGTAGTTACAGTACAAAAAGACTGGCACGCGTG +
Preference number: 3 (lower is better)
Translates to: LTQPAVQSSFKP*GSYSTKRLARV
Trigger: CACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTTTGAATGATGATTGTACTGCTGGTTGTGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR GCA 72 bp CACTATTCAGATAACCAACTGGAGACCGACAGGATTTaGCATGCATTTGCATCTTGCTACAGTTTGGTTTTT +
Preference number: 3 (lower is better)
Translates to: HYSDNQLETDRI*HAFASCYSLVF
Trigger: AAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGAGATATAAAGAATCTTaGGCCGCATCTCCTCACTGG +
Preference number: 3 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWRYKES*AASPHW
Trigger: CCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCT...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTTCATCAGCATTGGTTTaGGCCCAGGGCACAAGAAAG +
Preference number: 3 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFSSALV*AQGTRK
Trigger: CTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGA...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTATAAGGTCATCAGCATaGGTTTTGGCCCAGGGCACA +
Preference number: 3 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFIRSSA*VLAQGT
Trigger: TGTGCCCTGGGCCAAAACCAATGCTGATGACCTTAT...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTATAAGGTCATCAGCATaGGTTTTGGCCCAGGGCACA +
Preference number: 3 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSIRSSA*VLAQGT
Trigger: TGTGCCCTGGGCCAAAACCAATGCTGATGACCTTAT...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCTGTGGTTCCTGATTTaGGTCATTTTCAATTTCTGT +
Preference number: 3 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHLWFLI*VIFNFC
Trigger: ACAGAAATTGAAAATGACCAAAATCAGGAACCACAG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCCAGTTGACAGACTTTTaGCACTTCAAGATCAGGATG +
Preference number: 3 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTQLTDF*HFKIRM
Trigger: CATCCTGATCTTGAAGTGCAAAAAGTCTGTCAACTG...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CAA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTTTAACATCAAAAGATTaGATCACCCAGTTGACAGAC +
Preference number: 3 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLLTSKD*ITQLTD
Trigger: GTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAA...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTTTAACATCAAAAGATTaGATCACCCAGTTGACAGAC +
Preference number: 3 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVLTSKD*ITQLTD
Trigger: GTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAA...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR-3UTR CAA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGGCATCTTGCTACAGTTaGGTTTTTATGAAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: FALRHFAVVYASMGRNRKASCYS*VFMKGP
Trigger: AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGC...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGGATTTGCCATGCATTaGCATCTTGCTACAGTTTGG +
Preference number: 3 (lower is better)
Translates to: KFALRHFAVVYASMGRNRGFAMH*HLATVW
Trigger: CCAAACTGTAGCAAGATGCAAATGCATGGCAAATCC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR TCA 72 bp AAGATGAAATCTATTAGCCACAGGAGCCATTGTGTATaGAGTTATTGGACTATAGCCATTGTCCAAAGCCCA +
Preference number: 3 (lower is better)
Translates to: KMKSISHRSHCV*SYWTIAIVQSP
Trigger: TGGGCTTTGGACAATGGCTATAGTCCAATAACTTCATACACAATGGCTCCTGTGGCTAATAGATTTCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp TCATCTCCCATCTCCTCATTATTTTCAAGCCGAAGATaGAATCTATTAGCCACAGGAGCCATTGTGTATGAA +
Preference number: 3 (lower is better)
Translates to: SSPISSLFSSRR*NLLATGAIVYE
Trigger: TTCATACACAATGGCTCCTGTGGCTAATAGATTTCATCTTCGGCTTGAAAATAATGAGGAGATGGGAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR CCA 72 bp TTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTaGTTCTACTATCTGGCTATTAACCCTTTACCAACT +
Preference number: 3 (lower is better)
Translates to: FRYKESLAASPH*FYYLAINPLPT
Trigger: AGTTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CCA 72 bp CTTGTTTTACATCTTGGTTCAGATATAAAGAATCTTTaGCCGCATCTCCTCACTGGTTCTACTATCTGGCTA +
Preference number: 3 (lower is better)
Translates to: LVLHLGSDIKNL*PHLLTGSTIWL
Trigger: TAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATGTAAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCCTGTGGTTCCTGATTTaGGTCATTTTCAATTTCTGT +
Preference number: 3 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTLWFLI*VIFNFC
Trigger: ACAGAAATTGAAAATGACCAAAATCAGGAACCACAG...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGGATTTGCCATGCATTaGCATCTTGCTACAGTTTGG +
Preference number: 3 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFGFAMH*HLATVW
Trigger: CCAAACTGTAGCAAGATGCAAATGCATGGCAAATCC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR TCA 72 bp AATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAATaGAGTAACTGCTCCATACTCTTTTCGGGCCCAATT +
Preference number: 3 (lower is better)
Translates to: NINVSCYLEFGE*SNCSILFSGPI
Trigger: AATTGGGCCCGAAAAGAGTATGGAGCAGTTACTTCATTCACCGAACTCAAGATAGCAAGAAACATTTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR TCA 72 bp ATCAGGATGAGATTTTTGACCACTTCAAGATCCTCTTaGGAAGGTCTTATATCAATTGTTATATCCACCTGG +
Preference number: 3 (lower is better)
Translates to: IRMRFLTTSRSS*EGLISIVISTW
Trigger: CCAGGTGGATATAACAATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTCCATGCATTTGCATCTaGCTACAGTTTGGTTTTTAT +
Preference number: 3 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFPCICI*LQFGFY
Trigger: ATAAAAACCAAACTGTAGCAAGATGCAAATGCATGG...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGGAATTCTAAGTTGTTaGGGGGAAATTCTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFGILSC*GEILEK
Trigger: TTTTTCCAGAATTTCCCCCAAACAACTTAGAATTCC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGGCGAGCTCCGGCAGCTaGTGCGCCGCGGCAAAACTA +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQASSGS*CAAAKL
Trigger: TAGTTTTGCCGCGGCGCAGCAGCTGCCGGAGCTCGC...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR GCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGGGCCCCCGTCAGGAGTaGTCCGATCACAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQGPRQE*SDHKGC
Trigger: GCAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCC...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCGTGGCAGCCCAGTTGTaGCTCTGCTGGCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: DVPQGPRQECSDHKGCKRVAAQL*LCWHSL
Trigger: CAGGCTGTGCCAGCAGAGGCACAACTGGGCTGCCAC...GCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTTGGCCTTGCAGGTAGGATCCAACAGGGTGACGTCCATCCCCGAGTAGCCACTAGGCGTCCAGCGAGGTaGAGGCTTCGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGLAGRIQQGDVHPRVATRRPAR*RLRQEA
Trigger: TGCCTCCTGACGAAGCCTGCACCTCGCTGGACGCCT...AGTGGCTACTCGGGGATGGACGTCACCCTGTTGGATCCTACCTGCAAGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGATCGCGCAGGGAAAGTaGCCGGGGCGCGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGIAQGK*PGRESR
Trigger: GCGGCTCTCGCGCCCCGGCCACTTTCCCTGCGCGAT...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR CCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGAAGGCCTGGACAGGATaGGAGGCACTGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQKAWTG*EALTGD
Trigger: GTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTT...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGCAGGATGGGAGGCACTaGCAGGTGACAGTTCACACA +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQQDGRH*QVTVHT
Trigger: TGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTG...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAAGCTGGCCAGGCCCCTaGCCTGCAGTGCGGAGATTC +
Preference number: 4 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLSWPGP*PAVRRF
Trigger: GAATCTCCGCACTGCAGGCCAGGGGCCTGGCCAGCT...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGTCCTCATTCTGGGGCTaGCTGGACATCACACACCCT +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQSSFWG*LDITHP
Trigger: AGGGTGTGTGATGTCCAGCCAGCCCCAGAATGAGGA...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCGTGGCAGCCCAGTTGTaGCTCTGCTGGCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFVAAQL*LCWHSL
Trigger: CAGGCTGTGCCAGCAGAGGCACAACTGGGCTGCCAC...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGGCGTGCTCTGCGTGCTaGCGATGCTGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRACSAC*RCCGQH
Trigger: GTGCTGCCCACAGCATCGGCAGCACGCAGAGCACGC...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGGCGTGCTCTGCGTGCTaGCGATGCTGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGACSAC*RCCGQH
Trigger: GTGCTGCCCACAGCATCGGCAGCACGCAGAGCACGC...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATCAAGGCCTGGACAGGATGGGAGGCACTGACAGGTGACAGTTCACACAGTGCAGCTAGGCCGTGCTGCTaGTGGAGCAAGGCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: IKAWTGWEALTGDSSHSAARPCC*WSKACS
Trigger: AGAGCACGCCTTGCTCCAGCAGCAGCACGGCCTAGC...TGCACTGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR GCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGGGCTAGGCCGTGCTaGTGCTGGAGCAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRWARPC*CWSKAC
Trigger: GCACGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCA...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGAGCTGGCCAGGCCCCTaGCCTGCAGTGCGGAGATTC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRSWPGP*PAVRRF
Trigger: GAATCTCCGCACTGCAGGCCAGGGGCCTGGCCAGCT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CACACCAGGGGGTGTGGGGAGTTGAGCAGGAACACAACAGACTTGTGGTGGATGCCACACCAGGGGGTGTaGGGAGTTGAGCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: HTRGCGELSRNTTDLWWMPHQGV*GVEQEH
Trigger: GTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGG...CATCCACCACAAGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTACCGTGGGGCTGTTCCTaGAAGCTGCTGGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLPWGCS*KLLGFL
Trigger: GAGGAACCCCAGCAGCTTCCAGGAACAGCCCCACGG...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GAGAATAGATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGCCGTGGGGCTGTTCCTaGAAGCTGCTGGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ENRCTTRPPSGVLRSQRLPWGCS*KLLGFL
Trigger: GAGGAACCCCAGCAGCTTCCAGGAACAGCCCCACGG...CAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATCTATTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGAGGCCGTGCTGCTGCTaGAGCAAGGCGTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSERPCCC*SKACSA
Trigger: CGCAGAGCACGCCTTGCTCCAGCAGCAGCACGGCCT...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGTGGGCTGGGCTGGGTTaGGCCGGGTTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: QTQCPSRLGCPDHGKLVEWAGLG*AGLGWV
Trigger: AACCCAGCCCAACCCGGCCCAACCCAGCCCAGCCCA...CTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGCGAGAGCCGCCGACTaGCCTCCTTCACTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIARAAD*PPSLAG
Trigger: CCCAGCGAGTGAAGGAGGGCAGTCGGCGGCTCTCGC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR GCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGAGGCGTCCAGCGAGGTaGAGGCTTCGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRRRPAR*RLRQEA
Trigger: TGCCTCCTGACGAAGCCTGCACCTCGCTGGACGCCT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCAGGCGTCCAGCGAGGTaGAGGCTTCGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSRRPAR*RLRQEA
Trigger: TGCCTCCTGACGAAGCCTGCACCTCGCTGGACGCCT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGGGGGAGGTGGGGACTTaGTGCCTTCCTGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRGEVGT*CLPAVS
Trigger: GGAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCC...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGGGGGAGGTGGGGACTTaGTGCCTTCCTGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGGEVGT*CLPAVS
Trigger: GGAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCC...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCTCTGCGTGCTGCCGATaGTGTGGGCAGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFSACCR*CGQHCC
Trigger: ACAGCAGTGCTGCCCACAGCATCGGCAGCACGCAGA...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATGCGTGCTCTGCGTGCTaGCGATGCTGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNACSAC*RCCGQH
Trigger: GTGCTGCCCACAGCATCGGCAGCACGCAGAGCACGC...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGAAGGCGTGCTCTGCGTaGTGCCGATGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGKACSA*CRCCGQ
Trigger: CTGCCCACAGCATCGGCAGCACGCAGAGCACGCCTT...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCACCACACCAGGGGGTGTaGGGAGTTGAGCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPPHQGV*GVEQEH
Trigger: GTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGG...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGACTGTCCCCAAGGGCTaGAACCTGTATCACAATGGA +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQTVPKG*NLYHNG
Trigger: TCCATTGTGATACAGGTTCCAGCCCTTGGGGACAGT...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAGGCCGTGCTGCTGCTaGAGCAAGGCGTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: QTQCPSRLGCPDHGKLVERPCCC*SKACSA
Trigger: CGCAGAGCACGCCTTGCTCCAGCAGCAGCACGGCCT...CTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGCCTCTCTCTGTAGCTaGCCAGGCCCCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKASLCS*PGPWPA
Trigger: TGCAGGCCAGGGGCCTGGCCAGCTACAGAGAGAGGC...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR CAA 72 bp GGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTaGGCCTTCCCCTCCCCGGATGGGCGGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GNIWERKRKASI*AFPSPDGRVLQ
Trigger: CTGCAGAACCCGCCCATCCGGGGAGGGGAAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGAGCTCCGGCAGCTGCTaGGCCGCGGCAAAACTACGC +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQSSGSC*AAAKLR
Trigger: GCGTAGTTTTGCCGCGGCGCAGCAGCTGCCGGAGCT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR GCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATGTGGCAGCCCAGTTGTaGCTCTGCTGGCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNVAAQL*LCWHSL
Trigger: CAGGCTGTGCCAGCAGAGGCACAACTGGGCTGCCAC...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGGGAGGTGGGGACTTaGTGCCTTCCTGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKGEVGT*CLPAVS
Trigger: GGAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCC...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCTGCTGTGGGCAGCACTaGTGTTTTCCGAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSCCGQH*CFPRLA
Trigger: CGCCAGCCTCGGAAAACAGCAGTGCTGCCCACAGCA...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGCTAGGCCGTGCTGCTaGTGGAGCAAGGCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKARPCC*WSKACS
Trigger: AGAGCACGCCTTGCTCCAGCAGCAGCACGGCCTAGC...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGGGTTGGGCTAGGCCGTaGTGCTGCTGGAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQGWARP*CCWSKA
Trigger: CGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCAACC...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGGCTTTGACTCAATGTTaGCAGAGCTCTGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQALTQC*QSSASL
Trigger: CAAGGAAGCAGAGCTCTGGCAACATTGAGTCAAAGC...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CCA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAAAGGCCTGGACAGGATaGGAGGCACTGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPKAWTG*EALTGD
Trigger: GTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTT...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGACAACAGACTTGTGGTaGATGTGGACTGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQTTDLW*MWTEEM
Trigger: CATCTCCTCAGTCCACATCCACCACAAGTCTGTTGT...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCTGGGCTGGGCTGGGTTaGGCCGGGTTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCWAGLG*AGLGWV
Trigger: AACCCAGCCCAACCCGGCCCAACCCAGCCCAGCCCA...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGGCCGCATCTCCTCACTaGTTCTACTATCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQAASPH*FYYLAI
Trigger: AATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGC...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TGTCTTCAGATGCCACACCAGGGGGTGTGGGGAGTTGAGCAGGAACACAACAGAGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CLQMPHQGVWGVEQEHNRVVDVD*GDGIQV
Trigger: CACCTGAATCCCATCTCCTCAGTCCACATCCACCAC...TCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGGCATCTGAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCACACACCATCAAGGGCTaGCCACCGGGGCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAHTIKG*PPGPST
Trigger: GGTACTCGGCCCCGGTGGTCAGCCCTTGATGGTGTG...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCCACACCATCAAGGGCTaGCCACCGGGGCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLHTIKG*PPGPST
Trigger: GGTACTCGGCCCCGGTGGTCAGCCCTTGATGGTGTG...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATAAACCCCCAAGCCTGTaGGGGGCTGGTGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNKPPSL*GAGGED
Trigger: GTCTTCTCCACCAGCCCCTCACAGGCTTGGGGGTTT...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGTGGCAGCCCAGTTGTaGCTCTGCTGGCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIVAAQL*LCWHSL
Trigger: CAGGCTGTGCCAGCAGAGGCACAACTGGGCTGCCAC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGCGGAGATTCAGGACATaGACCTCCTGTGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRRRFRT*TSCGSP
Trigger: TGGGCTGCCACAGGAGGTGCATGTCCTGAATCTCCG...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAACGGAGATTCAGGACATaGACCTCCTGTGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKRRFRT*TSCGSP
Trigger: TGGGCTGCCACAGGAGGTGCATGTCCTGAATCTCCG...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGCTCTCTGTCTTCAGATaGCACACCAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGLSVFR*HTRGCG
Trigger: CCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAG...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAACTCTCTGTCTTCAGATaGCACACCAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKLSVFR*HTRGCG
Trigger: CCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAG...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGAAGGCGTGCTCTGCGTaGTGCCGATGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQKACSA*CRCCGQ
Trigger: CTGCCCACAGCATCGGCAGCACGCAGAGCACGCCTT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCATGGGCTAGGCCGTGCTaGTGCTGGAGCAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAWARPC*CWSKAC
Trigger: GCACGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCA...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGGGTTGGGCTAGGCCGTaGTGCTGCTGGAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIEGWARP*CCWSKA
Trigger: CGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCAACC...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCTTGCGATCGCGCCACTaGACTCCAGCCCGGGCGACA +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCLRSRH*TPARAT
Trigger: TGTCGCCCGGGCTGGAGTGCAGTGGCGCGATCGCAA...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAGGCCGTGCTGCTGCTaGAGCAAGGCGTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLRPCCC*SKACSA
Trigger: CGCAGAGCACGCCTTGCTCCAGCAGCAGCACGGCCT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CAA 72 bp TCTGTCTTCAGATGCCACACCAGGGGGTGTGGGGAGTaGAGCAGGAACACAACAGACTTGTGGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: SVFRCHTRGCGE*SRNTTDLWWMW
Trigger: CCACATCCACCACAAGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGGCATCTGAAGACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGCAGGATGGGAGGCACTaGCAGGTGACAGTTCACACA +
Preference number: 4 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSEQDGRH*QVTVHT
Trigger: TGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTG...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ATCAAGGCCTGGACAGGATGGGAGGCACTGACAGGTGACAGTTCACACAGTGCATCTGCTGGCACAGCCTaGCAAAACAGTGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: IKAWTGWEALTGDSSHSASAGTA*QNSEAL
Trigger: GAGAGCTTCACTGTTTTGTCAGGCTGTGCCAGCAGA...TGCACTGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR TCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGTCTCATTGTCACATTTaGCAGACAGGGCAATATCCA +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQSHCHI*QTGQYP
Trigger: TGGATATTGCCCTGTCTGTCAAATGTGACAATGAGA...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGCTGGGAAGAGGAAAGTaGCGCTCGGCGTCCCCGAAA +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQLGRGK*RSASPK
Trigger: TTTCGGGGACGCCGAGCGGCACTTTCCTCTTCCCAG...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR GCA 90 bp AGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGCTGTTCCTGGAAGCTaGTGGGGTTCCTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: RLQTQCPSRLGCPDHGKLAVPGS*WGSSPA
Trigger: AGCAGGTGAGGAACCCCAGCAGCTTCCAGGAACAGC...CAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp AGACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTAGGCGTCCAGCGAGGTaGAGGCTTCGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RLSWKYLGKETEGLHFGLRRPAR*RLRQEA
Trigger: TGCCTCCTGACGAAGCCTGCACCTCGCTGGACGCCT...AAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAGGCCCCCGTCAGGAGTaGTCCGATCACAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAGPRQE*SDHKGC
Trigger: GCAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCC...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGGGGAGGTGGGGACTTaGTGCCTTCCTGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLGEVGT*CLPAVS
Trigger: GGAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCGGGGAGGTGGGGACTTaGTGCCTTCCTGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ASWWITARGLVNVFLFCIGEVGT*CLPAVS
Trigger: GGAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCC...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGCTAGGCCGTGCTGCTaGTGGAGCAAGGCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCARPCC*WSKACS
Trigger: AGAGCACGCCTTGCTCCAGCAGCAGCACGGCCTAGC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTTGGCCTTGCAGGTAGGATCCAACAGGGTGACGTCCATCCCCGAGTAGCCACTGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LGLAGRIQQGDVHPRVATARSEV*IQTKVQ
Trigger: TTGCACCTTTGTCTGGATGCACACTTCTGACCTTGC...AGTGGCTACTCGGGGATGGACGTCACCCTGTTGGATCCTACCTGCAAGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATGACATGCACCTCCTGTaGCAGCCCAGTTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNDMHLL*QPSCAS
Trigger: AGAGGCACAACTGGGCTGCCACAGGAGGTGCATGTC...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATCCTCATTCTGGGGCTaGCTGGACATCACACACCCT +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKSSFWG*LDITHP
Trigger: AGGGTGTGTGATGTCCAGCCAGCCCCAGAATGAGGA...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTGGGCTGGGCTGGGTTaGGCCGGGTTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHWAGLG*AGLGWV
Trigger: AACCCAGCCCAACCCGGCCCAACCCAGCCCAGCCCA...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGTGGGCTGGGCTGGGTTaGGCCGGGTTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLWAGLG*AGLGWV
Trigger: AACCCAGCCCAACCCGGCCCAACCCAGCCCAGCCCA...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGATCTGCCTTGGAGTTTaGGGCATTTTAACAACAGCT +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQICLGV*GILTTA
Trigger: AGCTGTTGTTAAAATGCCCCAAACTCCAAGGCAGAT...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR CAA 72 bp TTGCACCTCTTCTGGCTCTCTGAGACCAGGAAACAGTaGTATGCTGGGAATGACAGGGTCCTTTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LHLFWLSETRKQ*YAGNDRVLWPR
Trigger: CCTCGGCCAAAGGACCCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGGAGGCACTGACAGGTaGCAGTTCACACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIGGTDR*QFTQCT
Trigger: GGTGCACTGTGTGAACTGTCACCTGTCAGTGCCTCC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATCTGCTGGCACAGCCTaGCAAAACAGTGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKSAGTA*QNSEAL
Trigger: GAGAGCTTCACTGTTTTGTCAGGCTGTGCCAGCAGA...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGGATTCAGGTGAAGTGTaGCCTCTCTCTGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGDSGEV*PLSVAG
Trigger: GCCAGCTACAGAGAGAGGTCACACTTCACCTGAATC...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR TCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKVVDVD*GDGIQV
Trigger: CACCTGAATCCCATCTCCTCAGTCCACATCCACCAC...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGGGGGGTGTGGGGAGTTaGGCAGGAACACAACAGACT +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQGGVGS*AGTQQT
Trigger: AGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCC...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGACTCAGCAAGGTAATTaGGTGAGAGAAAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQTQQGN*VRENSS
Trigger: GGAAGAATTTTCTCTCACTCAATTACCTTGCTGAGT...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTACCTCTTCTGGCTCTCTaGGACCAGGAAACAGTTGTA +
Preference number: 4 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLPLLAL*DQETVV
Trigger: TACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGG...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCCGATTTCAGGTCGGGTaGACAGGGAAGCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSRFQVG*TGKHLL
Trigger: AAGGAGATGCTTCCCTGTTCACCCGACCTGAAATCG...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGGGGTTCCTCACCTGCTaGAGGCTGCAATTAAACACC +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGGFLTC*RLQLNT
Trigger: GGTGTTTAATTGCAGCCTTCAGCAGGTGAGGAACCC...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCGGGTTCCTCACCTGCTaGAGGCTGCAATTAAACACC +
Preference number: 4 (lower is better)
Translates to: TSSYSASWPRLSRRPARCGFLTC*RLQLNT
Trigger: GGTGTTTAATTGCAGCCTTCAGCAGGTGAGGAACCC...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGAAACCCCCAAGCCTGTaGGGGGCTGGTGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIEKPPSL*GAGGED
Trigger: GTCTTCTCCACCAGCCCCTCACAGGCTTGGGGGTTT...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGAGACTGGCACGCGTGTaGGCACCCCACACACACTCA +
Preference number: 4 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIERLARV*APHTHS
Trigger: TGAGTGTGTGTGGGGTGCTCACACGCGTGCCAGTCT...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACGTGGCAGCCCAGTTGTaGCTCTGCTGGCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYVAAQL*LCWHSL
Trigger: CAGGCTGTGCCAGCAGAGGCACAACTGGGCTGCCAC...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAGCCCCTGGCCTGCAGTaGGGAGATTCAGGACATGCA +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAAPGLQ*GDSGHA
Trigger: TGCATGTCCTGAATCTCCGCACTGCAGGCCAGGGGC...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCGCCCCTGGCCTGCAGTaGGGAGATTCAGGACATGCA +
Preference number: 4 (lower is better)
Translates to: ASWWITARGLVNVFLFCIAPGLQ*GDSGHA
Trigger: TGCATGTCCTGAATCTCCGCACTGCAGGCCAGGGGC...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCCCAAAACAAAGTGTGTaGCATTCATCTTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: DVPQGPRQECSDHKGCKRPKQSV*HSSWPC
Trigger: GCAAGGCCAAGATGAATGGCACACACTTTGTTTTGG...GCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTTGGCCTTGCAGGTAGGATCCAACAGGGTGACGTCCATCCCCGAGTAGCCACTCCAAAACAAAGTGTGTaGCATTCATCTTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LGLAGRIQQGDVHPRVATPKQSV*HSSWPC
Trigger: GCAAGGCCAAGATGAATGGCACACACTTTGTTTTGG...AGTGGCTACTCGGGGATGGACGTCACCCTGTTGGATCCTACCTGCAAGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAAGGCTGCAAACGCAATaGCCATCACGGTTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKRLQTQ*PSRLGC
Trigger: ACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCATGCTGTGGGCAGCACTaGTGTTTTCCGAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKACCGQH*CFPRLA
Trigger: CGCCAGCCTCGGAAAACAGCAGTGCTGCCCACAGCA...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCATCTGCGTGCTGCCGATaGTGTGGGCAGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKASACCR*CGQHCC
Trigger: ACAGCAGTGCTGCCCACAGCATCGGCAGCACGCAGA...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCTCTGCGTGCTGCCGATaGTGTGGGCAGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCSACCR*CGQHCC
Trigger: ACAGCAGTGCTGCCCACAGCATCGGCAGCACGCAGA...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATTGGGCTAGGCCGTGCTaGTGCTGGAGCAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHWARPC*CWSKAC
Trigger: GCACGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCA...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTGGTTGGGCTAGGCCGTaGTGCTGCTGGAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGGWARP*CCWSKA
Trigger: CGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCAACC...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGCCATCCGGACCCGCTaGGGACTCTCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVAIRTR*GLSPPA
Trigger: TGCAGGAGGTGAGAGTCCCCAGCGGGTCCGGATGGC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR CCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCCAGTTGTGCCTCTGCTaGCACAGCCTGACAAAACAG +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSQLCLC*HSLTKQ
Trigger: CTGTTTTGTCAGGCTGTGCCAGCAGAGGCACAACTG...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAACAGTTGTGCCTCTGCTaGCACAGCCTGACAAAACAG +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKQLCLC*HSLTKQ
Trigger: CTGTTTTGTCAGGCTGTGCCAGCAGAGGCACAACTG...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATAGCTGGCCAGGCCCCTaGCCTGCAGTGCGGAGATTC +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHSWPGP*PAVRRF
Trigger: GAATCTCCGCACTGCAGGCCAGGGGCCTGGCCAGCT...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAATGACAGGGTCCTTTaGCCGAGGGAGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QTQCPSRLGCPDHGKLVENDRVL*PREPIF
Trigger: GAAGATGGGCTCCCTCGGCCAAAGGACCCTGTCATT...CTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATAATGACAGGGTCCTTTaGCCGAGGGAGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNNDRVL*PREPIF
Trigger: GAAGATGGGCTCCCTCGGCCAAAGGACCCTGTCATT...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGAACGTGTCCATTCTCTaGCACAGAGAAGACGCCCTG +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRNVSIL*HREDAL
Trigger: CAGGGCGTCTTCTCTGTGCCAGAGAATGGACACGTT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGAACGTGTCCATTCTCTaGCACAGAGAAGACGCCCTG +
Preference number: 4 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSENVSIL*HREDAL
Trigger: CAGGGCGTCTTCTCTGTGCCAGAGAATGGACACGTT...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTAGGCCGTGCTGCTGCTaGAGCAAGGCGTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGRPCCC*SKACSA
Trigger: CGCAGAGCACGCCTTGCTCCAGCAGCAGCACGGCCT...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: TSSYSASWPRLSRRPARCRPHRL*QQGQKC
Trigger: ACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCT...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 72 bp GTCACATTTGACAGACAGGGCAATATCCACGCTCCCTaGCACCTCTTCTGGCTCTCTGAGACCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: VTFDRQGNIHAP*HLFWLSETRKQ
Trigger: CTGTTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 72 bp GACTCCAAAACAAAGTGTGTGCCATTCATCTTGGCCTaGCAGGTAGGATCCAACAGGGTGACGTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: DSKTKCVPFILA*QVGSNRVTSIP
Trigger: GGGGATGGACGTCACCCTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGGAGGCACTGACAGGTaGCAGTTCACACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCGGTDR*QFTQCT
Trigger: GGTGCACTGTGTGAACTGTCACCTGTCAGTGCCTCC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACACAGGATGGGAGGCACTaGCAGGTGACAGTTCACACA +
Preference number: 4 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTQDGRH*QVTVHT
Trigger: TGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTG...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGCAGGATGGGAGGCACTaGCAGGTGACAGTTCACACA +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQQDGRH*QVTVHT
Trigger: TGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTG...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CTTGGCCTTGCAGGTAGGATCCAACAGGGTGACGTCCATCCCCGAGTAGCCACTTTTGGAGGGAACACTTaGTCTTCCCCCACTTTAATA +
Preference number: 4 (lower is better)
Translates to: LGLAGRIQQGDVHPRVATFGGNT*SSPTLI
Trigger: TATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAA...AGTGGCTACTCGGGGATGGACGTCACCCTGTTGGATCCTACCTGCAAGGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACACAAAATCCAGCCCTCTaGGTCTGGACACGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTQNPAL*VWTRGS
Trigger: TGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTG...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp AAGGGCTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCCTCTCTGTCTTCAGATaGCACACCAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KGWNLYHNGVIVDHTIKGLSVFR*HTRGCG
Trigger: CCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAG...GCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCCACACACCCTTCTGCTaGTTTGGGTTGAAGGTACTC +
Preference number: 4 (lower is better)
Translates to: TSSYSASWPRLSRRPARCHTPFC*FGLKVL
Trigger: GAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTG...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGCTGTTCCTGGAAGCTaGTGGGGTTCCTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLAVPGS*WGSSPA
Trigger: AGCAGGTGAGGAACCCCAGCAGCTTCCAGGAACAGC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTCCGATCACAAAGGCTaGAAACGCAATGCCCATCAC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRSDHKG*KRNAHH
Trigger: GTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGA...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTCCGATCACAAAGGCTaGAAACGCAATGCCCATCAC +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGSDHKG*KRNAHH
Trigger: GTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGA...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGGGCCCCCGTCAGGAGTaGTCCGATCACAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLGPRQE*SDHKGC
Trigger: GCAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCC...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TGGCCTCTGCAAATTAAGGGTGTAGCCTGCAGAAATAACAAAAGACTGCAGATAGCGTGCTCTGCGTGCTaGCGATGCTGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: WPLQIKGVACRNNKRLQIACSAC*RCCGQH
Trigger: GTGCTGCCCACAGCATCGGCAGCACGCAGAGCACGC...TATCTGCAGTCTTTTGTTATTTCTGCAGGCTACACCCTTAATTTGCAGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGAAGGCGTGCTCTGCGTaGTGCCGATGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLKACSA*CRCCGQ
Trigger: CTGCCCACAGCATCGGCAGCACGCAGAGCACGCCTT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATGCTAGGCCGTGCTGCTaGTGGAGCAAGGCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHARPCC*WSKACS
Trigger: AGAGCACGCCTTGCTCCAGCAGCAGCACGGCCTAGC...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTTGGGCTAGGCCGTGCTaGTGCTGGAGCAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTWARPC*CWSKAC
Trigger: GCACGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCA...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCCTCTCCATCAAGGCCTaGACAGGATGGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLLSIKA*TGWEAL
Trigger: CAGTGCCTCCCATCCTGTCCAGGCCTTGATGGAGAG...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGGACTTGTGGTGGATGTaGACTGAGGAGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRDLWWM*TEEMGF
Trigger: GAATCCCATCTCCTCAGTCCACATCCACCACAAGTC...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGGACTTGTGGTGGATGTaGACTGAGGAGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGDLWWM*TEEMGF
Trigger: GAATCCCATCTCCTCAGTCCACATCCACCACAAGTC...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACCCACACCAGGGGGTGTaGGGAGTTGAGCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYPHQGV*GVEQEH
Trigger: GTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGG...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTACAGAGAAGACGCCCTaGGAGGGCACCAAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQITEKTP*EGTKKR
Trigger: CCTCTTTTTGGTGCCCTCCCAGGGCGTCTTCTCTGT...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GCTGTCAAGGAGAAGTTTGCTGATGAAAACTGGACCACAGAACCCTCAGACACCACAGAGAAGACGCCCTaGGAGGGCACCAAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AVKEKFADENWTTEPSDTTEKTP*EGTKKR
Trigger: CCTCTTTTTGGTGCCCTCCCAGGGCGTCTTCTCTGT...GGTGTCTGAGGGTTCTGTGGTCCAGTTTTCATCAGCAAACTTCTCCTTGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATAAGCCTGTGAGGGGCTaGTGGAGAAGACCACCATTT +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNKPVRG*WRRPPF
Trigger: AAATGGTGGTCTTCTCCACCAGCCCCTCACAGGCTT...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGCAGTGCACCAGGCTCTaGACCTGTAATCCTAGTACT +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGQCTRL*TCNPST
Trigger: AGTACTAGGATTACAGGTCCAGAGCCTGGTGCACTG...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR TCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCCAGGATGGGAGGCACTaGCAGGTGACAGTTCACACA +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLQDGRH*QVTVHT
Trigger: TGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTG...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGATTCAGGTGAAGTGTaGCCTCTCTCTGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIDSGEV*PLSVAG
Trigger: GCCAGCTACAGAGAGAGGTCACACTTCACCTGAATC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR TCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLVVDVD*GDGIQV
Trigger: CACCTGAATCCCATCTCCTCAGTCCACATCCACCAC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CTCCAAAACAAAGTGTGTGCCATTCATCTTGGCCTTGCAGGTAGGATCCAACAGGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQNKVCAIHLGLAGRIQQVVDVD*GDGIQV
Trigger: CACCTGAATCCCATCTCCTCAGTCCACATCCACCAC...CTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAGTTGTATGCTGGGAATaGCAGGGTCCTTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAVVCWE*QGPLAE
Trigger: CTCGGCCAAAGGACCCTGTCATTCCCAGCATACAAC...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCGTTGTATGCTGGGAATaGCAGGGTCCTTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ASWWITARGLVNVFLFCIVVCWE*QGPLAE
Trigger: CTCGGCCAAAGGACCCTGTCATTCCCAGCATACAAC...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATCCTCTTCTGGCTCTCTaGGACCAGGAAACAGTTGTA +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNPLLAL*DQETVV
Trigger: TACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGG...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCACACACCATCAAGGGCTaGCCACCGGGGCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: QASLNIKRFDHPVDRLFAHTIKG*PPGPST
Trigger: GGTACTCGGCCCCGGTGGTCAGCCCTTGATGGTGTG...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTCGATTTCAGGTCGGGTaGACAGGGAAGCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIRFQVG*TGKHLL
Trigger: AAGGAGATGCTTCCCTGTTCACCCGACCTGAAATCG...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTCGGGTTCCTCACCTGCTaGAGGCTGCAATTAAACACC +
Preference number: 4 (lower is better)
Translates to: DSPGNIWERKRKASILAFGFLTC*RLQLNT
Trigger: GGTGTTTAATTGCAGCCTTCAGCAGGTGAGGAACCC...GAAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCGCCCTGGGTGTGGGGTaGATACAACGGGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: ASWWITARGLVNVFLFCIALGVG*IQRVIF
Trigger: AAAGATCACCCGTTGTATTCACCCCACACCCAGGGC...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGAAACCCCCAAGCCTGTaGGGGGCTGGTGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLKPPSL*GAGGED
Trigger: GTCTTCTCCACCAGCCCCTCACAGGCTTGGGGGTTT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGGCAGGAGAATCCCTTaGACCCGGGAAGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVGRRIP*TREAEV
Trigger: AACCTCCGCTTCCCGGGTTCAAGGGATTCTCCTGCC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR GCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATGCCCCTGGCCTGCAGTaGGGAGATTCAGGACATGCA +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHAPGLQ*GDSGHA
Trigger: TGCATGTCCTGAATCTCCGCACTGCAGGCCAGGGGC...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGCCCCTGGCCTGCAGTaGGGAGATTCAGGACATGCA +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALAPGLQ*GDSGHA
Trigger: TGCATGTCCTGAATCTCCGCACTGCAGGCCAGGGGC...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGCCCCTGGCCTGCAGTaGGGAGATTCAGGACATGCA +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVAPGLQ*GDSGHA
Trigger: TGCATGTCCTGAATCTCCGCACTGCAGGCCAGGGGC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACCTCTCTGTCTTCAGATaGCACACCAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYLSVFR*HTRGCG
Trigger: CCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAG...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCCATCACACACCCTTCTaGTGCTTTGGGTTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSHHTPF*CFGLKV
Trigger: TACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGCATCACACACCCTTCTaGTGCTTTGGGTTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSEHHTPF*CFGLKV
Trigger: TACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTAGGCGTCCAGCGAGGTaGAGGCTTCGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTRRPAR*RLRQEA
Trigger: TGCCTCCTGACGAAGCCTGCACCTCGCTGGACGCCT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACAAGGCTGCAAACGCAATaGCCATCACGGTTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTRLQTQ*PSRLGC
Trigger: ACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATTGCTGTGGGCAGCACTaGTGTTTTCCGAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHCCGQH*CFPRLA
Trigger: CGCCAGCCTCGGAAAACAGCAGTGCTGCCCACAGCA...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTCTGCGTGCTGCCGATaGTGTGGGCAGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHSACCR*CGQHCC
Trigger: ACAGCAGTGCTGCCCACAGCATCGGCAGCACGCAGA...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACGCGTGCTCTGCGTGCTaGCGATGCTGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINACSAC*RCCGQH
Trigger: GTGCTGCCCACAGCATCGGCAGCACGCAGAGCACGC...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTGGTTGGGCTAGGCCGTaGTGCTGCTGGAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPGWARP*CCWSKA
Trigger: CGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCAACC...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGTGCATTAAGACATTTTaGAGTGGTGTATGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQCIKTF*SGVCKY
Trigger: ATACTTGCATACACCACTGCAAAATGTCTTAATGCA...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTCCAAGATCGCGCCATTaGACTCCAGCCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ITVRVSRPWKIGGEIGFGPRSRH*TPACSG
Trigger: GCCACTGCAGGCTGGAGTGCAATGGCGCGATCTTGG...ACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGCAGTTGTGCCTCTGCTaGCACAGCCTGACAAAACAG +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQQLCLC*HSLTKQ
Trigger: CTGTTTTGTCAGGCTGTGCCAGCAGAGGCACAACTG...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATGACTTGTGGTGGATGTaGACTGAGGAGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNDLWWM*TEEMGF
Trigger: GAATCCCATCTCCTCAGTCCACATCCACCACAAGTC...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTCCACACCAGGGGGTGTaGGGAGTTGAGCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVPHQGV*GVEQEH
Trigger: GTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGG...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGAACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGACACCAAAAACAGTCTaGAGACCCCAGTGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VNVFLFCIMAQIIEASSETPKTV*RPQWQV
Trigger: GACTTGCCACTGGGGTCTCCAGACTGTTTTTGGTGT...CTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGACCCTTCTGCTGCTTTaGGTTGAAGGTACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRTLLLL*VEGTQQ
Trigger: TTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AAGGGCTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTCCTCATTCTGGGGCTaGCTGGACATCACACACCCT +
Preference number: 4 (lower is better)
Translates to: KGWNLYHNGVIVDHTIKGSSFWG*LDITHP
Trigger: AGGGTGTGTGATGTCCAGCCAGCCCCAGAATGAGGA...GCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGTCTTCAGATGCCACACCAGGGGGTGTGGGGAGTTGAGCAGGAACACAACAGATCCCCGAGTAGCCACTaGCCTGAAAAGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: CLQMPHQGVWGVEQEHNRSPSSH*PEKNLF
Trigger: AAAAAGATTCTTTTCAGGCCAGTGGCTACTCGGGGA...TCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGGCATCTGAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCATCCCCGAGTAGCCACTaGCCTGAAAAGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPSPSSH*PEKNLF
Trigger: AAAAAGATTCTTTTCAGGCCAGTGGCTACTCGGGGA...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGACTGTCCCCAAGGGCTaGAACCTGTATCACAATGGA +
Preference number: 4 (lower is better)
Translates to: RLQTQCPSRLGCPDHGKLTVPKG*NLYHNG
Trigger: TCCATTGTGATACAGGTTCCAGCCCTTGGGGACAGT...CAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGATCTTCATAACCATCTaGCCAACCACTACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRIFITI*PTTTVP
Trigger: GGGGACAGTAGTGGTTGGCCAGATGGTTATGAAGAT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGTTCCTGGAAGCTGCTaGGGTTCCTCACCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCVPGSC*GSSPAE
Trigger: TTCAGCAGGTGAGGAACCCCAGCAGCTTCCAGGAAC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGTCACATTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGAACGTGTCCATTCTCTaGCACAGAGAAGACGCCCTG +
Preference number: 4 (lower is better)
Translates to: IVTFDRQGNIHAPLHLFWNVSIL*HREDAL
Trigger: CAGGGCGTCTTCTCTGTGCCAGAGAATGGACACGTT...CCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTAGGCCGTGCTGCTGCTaGAGCAAGGCGTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPRPCCC*SKACSA
Trigger: CGCAGAGCACGCCTTGCTCCAGCAGCAGCACGGCCT...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGTGGGCTGGGCTGGGTTaGGCCGGGTTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWWAGLG*AGLGWV
Trigger: AACCCAGCCCAACCCGGCCCAACCCAGCCCAGCCCA...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGAAGCCTGTGAGGGGCTaGTGGAGAAGACCACCATTT +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQKPVRG*WRRPPF
Trigger: AAATGGTGGTCTTCTCCACCAGCCCCTCACAGGCTT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTCAAGCCTGTGAGGGGCTaGTGGAGAAGACCACCATTT +
Preference number: 4 (lower is better)
Translates to: DSPGNIWERKRKASILAFKPVRG*WRRPPF
Trigger: AAATGGTGGTCTTCTCCACCAGCCCCTCACAGGCTT...GAAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGACAGTACAAAAAGACTaGCACGCGTGTGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQTVQKD*HACEHP
Trigger: GGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAGTAATCTCAACACTTTaGGAGCCCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAVISTL*EPEAGG
Trigger: TCCACCCGCCTCGGGCTCCCAAAGTGTTGAGATTAC...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR TCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATGGAGGCACTGACAGGTaGCAGTTCACACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHGGTDR*QFTQCT
Trigger: GGTGCACTGTGTGAACTGTCACCTGTCAGTGCCTCC...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGGAGGCACTGACAGGTaGCAGTTCACACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVGGTDR*QFTQCT
Trigger: GGTGCACTGTGTGAACTGTCACCTGTCAGTGCCTCC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGGAGATGGGATTCAGGTaGAGTGTGACCTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQEMGFR*SVTSLC
Trigger: ACAGAGAGAGGTCACACTTCACCTGAATCCCATCTC...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR TCA 90 bp GAGAATAGATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGTCTCATTGTCACATTTaGCAGACAGGGCAATATCCA +
Preference number: 4 (lower is better)
Translates to: ENRCTTRPPSGVLRSQRLSHCHI*QTGQYP
Trigger: TGGATATTGCCCTGTCTGTCAAATGTGACAATGAGA...CAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATCTATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACACACCATCAAGGGCTaGCCACCGGGGCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLHTIKG*PPGPST
Trigger: GGTACTCGGCCCCGGTGGTCAGCCCTTGATGGTGTG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGGATTCAGGTGAAGTGTaGCCACACCCCTTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: QTQCPSRLGCPDHGKLVEDSGEV*PHPFSL
Trigger: TAGAGAAAAGGGGTGTGGTCACACTTCACCTGAATC...CTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR TCA 90 bp AGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGTTATGCATCGTGGACTaGGAGTCAAGAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: RLQTQCPSRLGCPDHGKLLCIVD*ESRDPF
Trigger: GAATGGGTCTCTTGACTCTCAGTCCACGATGCATAA...CAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTATTTCTCCAACAGTaGGTCTCGTCCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKLFLQQ*VSSSHF
Trigger: GAAGTGACTGGACGAGACGCACTGTTGGAGAAATAA...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGCGGAGATTCAGGACATaGACCTCCTGTGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLRRFRT*TSCGSP
Trigger: TGGGCTGCCACAGGAGGTGCATGTCCTGAATCTCCG...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCTCTCTGTCTTCAGATaGCACACCAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHLSVFR*HTRGCG
Trigger: CCCACACCCCCTGGTGTGGCATCTGAAGACAGAGAG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTCACACACCCTTCTGCTaGTTTGGGTTGAAGGTACTC +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIHTPFC*FGLKVL
Trigger: GAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTG...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGCTGTTCCTGGAAGCTaGTGGGGTTCCTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVAVPGS*WGSSPA
Trigger: AGCAGGTGAGGAACCCCAGCAGCTTCCAGGAACAGC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGGCAACTTCTGGGGGTaGTTCTCCATCTTCGTACAC +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCGNFWG*FSIFVH
Trigger: GTGTACGAAGATGGAGAAGCACCCCCAGAAGTTGCC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAGGCAACTTCTGGGGGTaGTTCTCCATCTTCGTACAC +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAGNFWG*FSIFVH
Trigger: GTGTACGAAGATGGAGAAGCACCCCCAGAAGTTGCC...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTCCAAAACAAAGTGTGTGCCATTCATCTTGGCCTTGCAGGTAGGATCCAACAGGGCAACTTCTGGGGGTaGTTCTCCATCTTCGTACAC +
Preference number: 4 (lower is better)
Translates to: LQNKVCAIHLGLAGRIQQGNFWG*FSIFVH
Trigger: GTGTACGAAGATGGAGAAGCACCCCCAGAAGTTGCC...CTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCAGGCTGCAAACGCAATaGCCATCACGGTTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ASWWITARGLVNVFLFCIRLQTQ*PSRLGC
Trigger: ACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTGGCCCCCGTCAGGAGTaGTCCGATCACAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPGPRQE*SDHKGC
Trigger: GCAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCC...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCGGCAATCCAAATGAGTaGCCTTTTCCAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSGNPNE*PFPISA
Trigger: TGCTGAGATTGGAAAAGGGCACTCATTTGGATTGCC...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGAAGGCCTGGACAGGATaGGAGGCACTGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALKAWTG*EALTGD
Trigger: GTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTT...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTCTCTCCATCAAGGCCTaGACAGGATGGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLLSIKA*TGWEAL
Trigger: CAGTGCCTCCCATCCTGTCCAGGCCTTGATGGAGAG...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCTCTCCATCAAGGCCTaGACAGGATGGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHLSIKA*TGWEAL
Trigger: CAGTGCCTCCCATCCTGTCCAGGCCTTGATGGAGAG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCCAGTTGTGCCTCTGCTaGCACAGCCTGACAAAACAG +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLQLCLC*HSLTKQ
Trigger: CTGTTTTGTCAGGCTGTGCCAGCAGAGGCACAACTG...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTCCACACCAGGGGGTGTaGGGAGTTGAGCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTPHQGV*GVEQEH
Trigger: GTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTGG...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGCCCTATGTTGCACTTTaGAGGGAACACTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRPYVAL*REHLIF
Trigger: GAAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGG...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGCCCTATGTTGCACTTTaGAGGGAACACTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGPYVAL*REHLIF
Trigger: GAAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGG...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTTCCACAGAGAAGACGCCCTaGGAGGGCACCAAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TVRVSRPWKIGGEIGFGSTEKTP*EGTKKR
Trigger: CCTCTTTTTGGTGCCCTCCCAGGGCGTCTTCTCTGT...GGAACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCGAGATAAAGCACGTTTaGATGGCAAATCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFEIKHV*MANPSS
Trigger: AGAACTGGGATTTGCCATCCAAACGTGCTTTATCTC...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTCTTATTCTGCATCATaGCCCAGATTATCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRSYSAS*PRLSRR
Trigger: ACGCCTCGATAATCTGGGCCATGATGCAGAATAAGA...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCAGGCTTCTGGAGAAATTGGATTTaGTTCCTTCATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: LILHHGPDYRGVQRGAGFWRNWI*FLHAWT
Trigger: GGTCCAAGCATGAAGGAACCAAATCCAATTTCTCCA...GAAGCCTGCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATTGGTGGAGAAATTaGATTTGGTTCCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: DVPQGPRQECSDHKGCKRNWWRN*IWFLHA
Trigger: AGCATGAAGGAACCAAATCCAATTTCTCCACCAATT...GCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGCCGCATCTCCTCACTaGTTCTACTATCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKAASPH*FYYLAI
Trigger: AATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGC...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCATTCAGATAACCAACTaGAGACCGACAGGATTTGCC +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSIQITN*RPTGFA
Trigger: GGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAAT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGCTTTCTTATGCATCGTaGACTGAGAGTCAAGAGACC +
Preference number: 4 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSELSYAS*TESQET
Trigger: GGTCTCTTGACTCTCAGTCCACGATGCATAAGAAAG...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR CCA 90 bp AAGGGCTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCCACTCCAGCCTGCAGTaGCTAAACAGGAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: KGWNLYHNGVIVDHTIKGHSSLQ*LNRSSS
Trigger: TGATGAGCTCCTGTTTAGCCACTGCAGGCTGGAGTG...GCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR TCA 90 bp CTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTGACCGAGATGGGATTCAGGTaGAGTGTGACCTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LEPVSQWSYSRPHHQGLTEMGFR*SVTSLC
Trigger: ACAGAGAGAGGTCACACTTCACCTGAATCCCATCTC...GGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR TCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATCTTGAGTTCGGTGAATaGAGTAACTGCTCCATACTC +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNLEFGE*SNCSIL
Trigger: GAGTATGGAGCAGTTACTTCATTCACCGAACTCAAG...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAACTTGAGTTCGGTGAATaGAGTAACTGCTCCATACTC +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKLEFGE*SNCSIL
Trigger: GAGTATGGAGCAGTTACTTCATTCACCGAACTCAAG...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTTGGAGGGAACACTTaGTCTTCCCCCACTTTAATA +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKFGGNT*SSPTLI
Trigger: TATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAA...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAACTCAGCAAGGTAATTaGGTGAGAGAAAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPTQQGN*VRENSS
Trigger: GGAAGAATTTTCTCTCACTCAATTACCTTGCTGAGT...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAACAGATTCCCTTGGGTTaGAGGAATGTCATCTCTTAT +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKQIPLG*RNVISY
Trigger: ATAAGAGATGACATTCCTTCAACCCAAGGGAATCTG...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAAGGAGCCATTGTGTATaGAGTTATTGGACTATAGCC +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKRSHCV*SYWTIA
Trigger: GGCTATAGTCCAATAACTTCATACACAATGGCTCCT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCAGGAGCCATTGTGTATaGAGTTATTGGACTATAGCC +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSRSHCV*SYWTIA
Trigger: GGCTATAGTCCAATAACTTCATACACAATGGCTCCT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AAGGGCTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCCCTCTTCTGGCTCTCTaGGACCAGGAAACAGTTGTA +
Preference number: 4 (lower is better)
Translates to: KGWNLYHNGVIVDHTIKGPLLAL*DQETVV
Trigger: TACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGG...GCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCACACCATCAAGGGCTaGCCACCGGGGCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRHTIKG*PPGPST
Trigger: GGTACTCGGCCCCGGTGGTCAGCCCTTGATGGTGTG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACCGATTTCAGGTCGGGTaGACAGGGAAGCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYRFQVG*TGKHLL
Trigger: AAGGAGATGCTTCCCTGTTCACCCGACCTGAAATCG...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTCAAAATCCAGCCCTCTaGGTCTGGACACGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGQNPAL*VWTRGS
Trigger: TGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTG...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GCTGTCAAGGAGAAGTTTGCTGATGAAAACTGGACCACAGAACCCTCAGACACCCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: AVKEKFADENWTTEPSDTPLPTP*VWVKLR
Trigger: CCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGG...GGTGTCTGAGGGTTCTGTGGTCCAGTTTTCATCAGCAAACTTCTCCTTGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR TCA 90 bp CAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGGTAAGGCAATCCAAATaGGTGCCCTTTTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: QTQCPSRLGCPDHGKLVEVRQSK*VPFSNL
Trigger: GAGATTGGAAAAGGGCACTCATTTGGATTGCCTTAC...CTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR TCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTAGACTGGCACGCGTGTaGGCACCCCACACACACTCA +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPRLARV*APHTHS
Trigger: TGAGTGTGTGTGGGGTGCTCACACGCGTGCCAGTCT...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp CAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGTTATTTCTCCAACAGTaGGTCTCGTCCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: QTQCPSRLGCPDHGKLVELFLQQ*VSSSHF
Trigger: GAAGTGACTGGACGAGACGCACTGTTGGAGAAATAA...CTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTCATCACACACCCTTCTaGTGCTTTGGGTTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIHHTPF*CFGLKV
Trigger: TACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTTCCGGCAACTTCTGGGGGTaGTTCTCCATCTTCGTACAC +
Preference number: 4 (lower is better)
Translates to: TVRVSRPWKIGGEIGFGSGNFWG*FSIFVH
Trigger: GTGTACGAAGATGGAGAAGCACCCCCAGAAGTTGCC...GGAACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCTGCTGTGGGCAGCACTaGTGTTTTCCGAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTCCGQH*CFPRLA
Trigger: CGCCAGCCTCGGAAAACAGCAGTGCTGCCCACAGCA...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGGTTGGGCTAGGCCGTaGTGCTGCTGGAGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRGWARP*CCWSKA
Trigger: CGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCAACC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAACAAGAAAGGAATGTTaGCTTAACACTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLTRKEC*LNTCQG
Trigger: ACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGT...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAACGACAGGATTTGCCATaGATTTGCATCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKRQDLP*ICILLQ
Trigger: CTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCG...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATCGACAGGATTTGCCATaGATTTGCATCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNRQDLP*ICILLQ
Trigger: CTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCG...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTAGGGACTCTGTAATTTaGCCCTCATCCTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIRDSVI*PSSSKS
Trigger: ACTCTTGGAGGATGAGGGGCAAATTACAGAGTCCCT...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR CCA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCCCACCCGCAGCAAGTTaGAGGAAAGCGGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTPPAAS*RKAAAS
Trigger: ACTTGCCGCCGCTTTCCTCCAACTTGCTGCGGGTGG...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTGACATGCACCTCCTGTaGCAGCCCAGTTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTDMHLL*QPSCAS
Trigger: AGAGGCACAACTGGGCTGCCACAGGAGGTGCATGTC...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGACTTGTGGTGGATGTaGACTGAGGAGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCDLWWM*TEEMGF
Trigger: GAATCCCATCTCCTCAGTCCACATCCACCACAAGTC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AGACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTGACTTGTGGTGGATGTaGACTGAGGAGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: RLSWKYLGKETEGLHFGLDLWWM*TEEMGF
Trigger: GAATCCCATCTCCTCAGTCCACATCCACCACAAGTC...AAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGAACACAACAGACTTGTaGTGGATGTGGACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQNTTDL*WMWTEE
Trigger: CTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCACACCAAAAACAGTCTaGAGACCCCAGTGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCTPKTV*RPQWQV
Trigger: GACTTGCCACTGGGGTCTCCAGACTGTTTTTGGTGT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTTCCTCATTCTGGGGCTaGCTGGACATCACACACCCT +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGSSFWG*LDITHP
Trigger: AGGGTGTGTGATGTCCAGCCAGCCCCAGAATGAGGA...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATAATGACAGGGTCCTTTaGCCGAGGGAGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHNDRVL*PREPIF
Trigger: GAAGATGGGCTCCCTCGGCCAAAGGACCCTGTCATT...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATAATGACAGGGTCCTTTaGCCGAGGGAGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHNDRVL*PREPIF
Trigger: GAAGATGGGCTCCCTCGGCCAAAGGACCCTGTCATT...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAATCCCCGAGTAGCCACTaGCCTGAAAAGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKSPSSH*PEKNLF
Trigger: AAAAAGATTCTTTTCAGGCCAGTGGCTACTCGGGGA...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATGTTCCTGGAAGCTGCTaGGGTTCCTCACCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHVPGSC*GSSPAE
Trigger: TTCAGCAGGTGAGGAACCCCAGCAGCTTCCAGGAAC...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATGTTCCTGGAAGCTGCTaGGGTTCCTCACCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHVPGSC*GSSPAE
Trigger: TTCAGCAGGTGAGGAACCCCAGCAGCTTCCAGGAAC...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTTCCTGGAAGCTGCTaGGGTTCCTCACCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALVPGSC*GSSPAE
Trigger: TTCAGCAGGTGAGGAACCCCAGCAGCTTCCAGGAAC...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACCGTGGGGCTGTTCCTaGAAGCTGCTGGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLPWGCS*KLLGFL
Trigger: GAGGAACCCCAGCAGCTTCCAGGAACAGCCCCACGG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCCGTGGGGCTGTTCCTaGAAGCTGCTGGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FALRHFAVVYASMGRNRKPWGCS*KLLGFL
Trigger: GAGGAACCCCAGCAGCTTCCAGGAACAGCCCCACGG...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGACAGAGAAGACGCCCTaGGAGGGCACCAAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALTEKTP*EGTKKR
Trigger: CCTCTTTTTGGTGCCCTCCCAGGGCGTCTTCTCTGT...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTACAGAGAAGACGCCCTaGGAGGGCACCAAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGTEKTP*EGTKKR
Trigger: CCTCTTTTTGGTGCCCTCCCAGGGCGTCTTCTCTGT...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAGAAAGTGCACTCTCTTaGGACTGTAGAATTTCACAG +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKESALS*DCRISQ
Trigger: CTGTGAAATTCTACAGTCCCAAGAGAGTGCACTTTC...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCGAAAGTGCACTCTCTTaGGACTGTAGAATTTCACAG +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSESALS*DCRISQ
Trigger: CTGTGAAATTCTACAGTCCCAAGAGAGTGCACTTTC...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAATCTTATTCTGCATCATaGCCCAGATTATCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKSYSAS*PRLSRR
Trigger: ACGCCTCGATAATCTGGGCCATGATGCAGAATAAGA...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTTTAGATTCTGCTTCATaGTGGATCACAGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQILDSAS*WITARG
Trigger: GCCCCTTGCTGTGATCCACCATGAAGCAGAATCTAA...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GCTGTCAAGGAGAAGTTTGCTGATGAAAACTGGACCACAGAACCCTCAGACACCTTAGATTCTGCTTCATaGTGGATCACAGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: AVKEKFADENWTTEPSDTLDSAS*WITARG
Trigger: GCCCCTTGCTGTGATCCACCATGAAGCAGAATCTAA...GGTGTCTGAGGGTTCTGTGGTCCAGTTTTCATCAGCAAACTTCTCCTTGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGAGGGTGTCCAGACCATaGAAAATTGGTGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSERVSRP*KIGGEI
Trigger: AATTTCTCCACCAATTTTCCATGGTCTGGACACCCT...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTCAGGGCCCCAAATTATaGATGTTCTCACCTGGACAA +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIQGPKL*MFSPGQ
Trigger: TTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTG...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CACACCAGGGGGTGTGGGGAGTTGAGCAGGAACACAACAGACTTGTGGTGGATGACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: HTRGCGELSRNTTDLWWMTGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...CATCCACCACAAGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTCGCCGCATCTCCTCACTaGTTCTACTATCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: DSPGNIWERKRKASILAFAASPH*FYYLAI
Trigger: AATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGC...GAAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGGATATAAAGAATCTTTaGCCGCATCTCCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRDIKNL*PHLLTG
Trigger: ACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATC...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GAGAATAGATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGATGGGCACAAATCTGTaGTTCCTGATTTTGGTCATT +
Preference number: 4 (lower is better)
Translates to: ENRCTTRPPSGVLRSQRLMGTNL*FLILVI
Trigger: AATGACCAAAATCAGGAACCACAGATTTGTGCCCAT...CAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATCTATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CACACCAGGGGGTGTGGGGAGTTGAGCAGGAACACAACAGACTTGTGGTGGATGTTGACATATTTTGAGTaGAAACACTCACCCTACCAA +
Preference number: 4 (lower is better)
Translates to: HTRGCGELSRNTTDLWWMLTYFE*KHSPYQ
Trigger: TTGGTAGGGTGAGTGTTTCCACTCAAAATATGTCAA...CATCCACCACAAGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCTGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGACAGACAATCTGCCTTaGAGTTTGGGGCATTTTAAC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRTDNLP*SLGHFN
Trigger: GTTAAAATGCCCCAAACTCCAAGGCAGATTGTCTGT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGACAGACAATCTGCCTTaGAGTTTGGGGCATTTTAAC +
Preference number: 4 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSETDNLP*SLGHFN
Trigger: GTTAAAATGCCCCAAACTCCAAGGCAGATTGTCTGT...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCCTTCCTTGTGTGTGCTaGCATCCATCTGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLLPCVC*HPSADS
Trigger: GCTATCTGCAGATGGATGCCAGCACACACAAGGAAG...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CCA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCCAAGCTGGAGCACAGTaGCGCAGTCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGQAGAQ*RSLGSL
Trigger: CAGTGAGCCAAGACTGCGCCACTGTGCTCCAGCTTG...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR TCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACGGAGGCACTGACAGGTaGCAGTTCACACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINGGTDR*QFTQCT
Trigger: GGTGCACTGTGTGAACTGTCACCTGTCAGTGCCTCC...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTGATTCAGGTGAAGTGTaGCCTCTCTCTGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGDSGEV*PLSVAG
Trigger: GCCAGCTACAGAGAGAGGTCACACTTCACCTGAATC...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR TCA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTGATTCAGGTGAAGTGTaGCCTCTCTCTGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLDSGEV*PLSVAG
Trigger: GCCAGCTACAGAGAGAGGTCACACTTCACCTGAATC...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR TCA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCGGGGGTGTGGGGAGTTaGGCAGGAACACAACAGACT +
Preference number: 4 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTGGVGS*AGTQQT
Trigger: AGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCC...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp TTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAATGGGGGTGTGGGGAGTTaGGCAGGAACACAACAGACT +
Preference number: 4 (lower is better)
Translates to: FFYSHDHLLIVTFDRQGNGGVGS*AGTQQT
Trigger: AGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCC...ATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGTTTGGAGGGAACACTTaGTCTTCCCCCACTTTAATA +
Preference number: 4 (lower is better)
Translates to: QTQCPSRLGCPDHGKLVEFGGNT*SSPTLI
Trigger: TATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAA...CTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAAGCAAGGTAATTGAGTaGGAGAAAATTCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: PSGVLRSQRLQTQCPSRLSKVIE*EKILPY
Trigger: ATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCT...TAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGAAATCCATTATCACCTaGCTCCAGATCTTCATAACC +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRKSIIT*LQIFIT
Trigger: GGTTATGAAGATCTGGAGTCAGGTGATAATGGATTT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCGATTTCAGGTCGGGTaGACAGGGAAGCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHRFQVG*TGKHLL
Trigger: AAGGAGATGCTTCCCTGTTCACCCGACCTGAAATCG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIEPLPTP*VWVKLR
Trigger: CCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGG...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACAGTAAGGCAATCCAAATaGGTGCCCTTTTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTVRQSK*VPFSNL
Trigger: GAGATTGGAAAAGGGCACTCATTTGGATTGCCTTAC...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGTAAGGCAATCCAAATaGGTGCCCTTTTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIVRQSK*VPFSNL
Trigger: GAGATTGGAAAAGGGCACTCATTTGGATTGCCTTAC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGACAAGGAGGTATCACTaGGCTTATTTTAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGTRRYH*AYFSCK
Trigger: TTTGCAGCTAAAATAAGCTCAGTGATACCTCCTTGT...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000533089.5
CDS-3UTR GCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTCGGAGATTCAGGACATaGACCTCCTGTGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPRRFRT*TSCGSP
Trigger: TGGGCTGCCACAGGAGGTGCATGTCCTGAATCTCCG...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACACCAAAACAAAGTGTGTaGCATTCATCTTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTPKQSV*HSSWPC
Trigger: GCAAGGCCAAGATGAATGGCACACACTTTGTTTTGG...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTAGGCTGCAAACGCAATaGCCATCACGGTTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGRLQTQ*PSRLGC
Trigger: ACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGTGCTGTGGGCAGCACTaGTGTTTTCCGAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWCCGQH*CFPRLA
Trigger: CGCCAGCCTCGGAAAACAGCAGTGCTGCCCACAGCA...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAATCTGCGTGCTGCCGATaGTGTGGGCAGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQSACCR*CGQHCC
Trigger: ACAGCAGTGCTGCCCACAGCATCGGCAGCACGCAGA...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGCTAGGCCGTGCTGCTaGTGGAGCAAGGCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRARPCC*WSKACS
Trigger: AGAGCACGCCTTGCTCCAGCAGCAGCACGGCCTAGC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAATGGGCTAGGCCGTGCTaGTGCTGGAGCAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: LIFPHFNINVSCYLEFGEWARPC*CWSKAC
Trigger: GCACGCCTTGCTCCAGCAGCAGCACGGCCTAGCCCA...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp AAGGGCTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: KGWNLYHNGVIVDHTIKGARSEV*IQTKVQ
Trigger: TTGCACCTTTGTCTGGATGCACACTTCTGACCTTGC...GCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGACAAGAAAGGAATGTTaGCTTAACACTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRTRKEC*LNTCQG
Trigger: ACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGATTATACAGACAATCTaGCTTGGAGTTTGGGGCATT +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGIIQTI*LGVWGI
Trigger: AATGCCCCAAACTCCAAGGCAGATTGTCTGTATAAT...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAACACACTCACAATCATaGCCACTAAGAACACAAGCA +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKTHSQS*PLRTQA
Trigger: TGCTTGTGTTCTTAGTGGGCATGATTGTGAGTGTGT...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGATGTTGCCAGAGCTCTaGTTCCTTGTGTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLMLPEL*FLVCAG
Trigger: GCCAGCACACACAAGGAAGCAGAGCTCTGGCAACAT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CCA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCCCCTCCTTCACTCGCTaGGAAGAGGAAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTPSFTR*EEESAA
Trigger: AGCGGCACTTTCCTCTTCCCAGCGAGTGAAGGAGGG...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR CCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACGACATGCACCTCCTGTaGCAGCCCAGTTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINDMHLL*QPSCAS
Trigger: AGAGGCACAACTGGGCTGCCACAGGAGGTGCATGTC...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCACAACAGACTTGTGGTaGATGTGGACTGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCTTDLW*MWTEEM
Trigger: CATCTCCTCAGTCCACATCCACCACAAGTCTGTTGT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAAACACAACAGACTTGTaGTGGATGTGGACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKANTTDL*WMWTEE
Trigger: CTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTT...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCAGATGTTCATTTCCATaGGGGAAGTTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSRCSFP*GKFLSS
Trigger: AGAAGAAAGGAACTTCCCCCATGGAAATGAACATCT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGCCCTATGTTGCACTTTaGAGGGAACACTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQPYVAL*REHLIF
Trigger: GAAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGG...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGCCCTTGCACCTCTTCTaGCTCTCTGAGACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLPLHLF*LSETRK
Trigger: TTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGG...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTCCCTTGCACCTCTTCTaGCTCTCTGAGACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVPLHLF*LSETRK
Trigger: TTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGG...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCATCTTCATAACCATCTaGCCAACCACTACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLIFITI*PTTTVP
Trigger: GGGGACAGTAGTGGTTGGCCAGATGGTTATGAAGAT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCATCTTCATAACCATCTaGCCAACCACTACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCIFITI*PTTTVP
Trigger: GGGGACAGTAGTGGTTGGCCAGATGGTTATGAAGAT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATAACGTGTCCATTCTCTaGCACAGAGAAGACGCCCTG +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHNVSIL*HREDAL
Trigger: CAGGGCGTCTTCTCTGTGCCAGAGAATGGACACGTT...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CTCCAAAACAAAGTGTGTGCCATTCATCTTGGCCTTGCAGGTAGGATCCAACAGTTAGATTCTGCTTCATaGTGGATCACAGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQNKVCAIHLGLAGRIQQLDSAS*WITARG
Trigger: GCCCCTTGCTGTGATCCACCATGAAGCAGAATCTAA...CTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GAGAATAGATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGTGGTTCCTTCATGCTTaGACCTTTTTCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: ENRCTTRPPSGVLRSQRLWFLHA*TFFFRF
Trigger: GAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCA...CAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATCTATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGCAGACCATGGAAAATTaGTGGAGAAATTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRQTMEN*WRNWIW
Trigger: CCAAATCCAATTTCTCCACCAATTTTCCATGGTCTG...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAAGGGTGTCCAGACCATaGAAAATTGGTGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKRVSRP*KIGGEI
Trigger: AATTTCTCCACCAATTTTCCATGGTCTGGACACCCT...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATAGGGTGTCCAGACCATaGAAAATTGGTGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNRVSRP*KIGGEI
Trigger: AATTTCTCCACCAATTTTCCATGGTCTGGACACCCT...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAGGGTGTCCAGACCATaGAAAATTGGTGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: QTQCPSRLGCPDHGKLVERVSRP*KIGGEI
Trigger: AATTTCTCCACCAATTTTCCATGGTCTGGACACCCT...CTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAAGGCCTGGACAGGATGGGAGGCACTGACAGGTGACAGTTCACACAGTGCAACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: IKAWTGWEALTGDSSHSATGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...TGCACTGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGCCGCATCTCCTCACTaGTTCTACTATCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLAASPH*FYYLAI
Trigger: AATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATGATATAAAGAATCTTTaGCCGCATCTCCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNDIKNL*PHLLTG
Trigger: ACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATC...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVRPHRL*QQGQKC
Trigger: ACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCT...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHRPHRL*QQGQKC
Trigger: ACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCT...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAATGGGCACAAATCTGTaGTTCCTGATTTTGGTCATT +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKMGTNL*FLILVI
Trigger: AATGACCAAAATCAGGAACCACAGATTTGTGCCCAT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGATGGGCACAAATCTGTaGTTCCTGATTTTGGTCATT +
Preference number: 4 (lower is better)
Translates to: SSVVQKPRVMFILALGVGMGTNL*FLILVI
Trigger: AATGACCAAAATCAGGAACCACAGATTTGTGCCCAT...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCATGGGCACAAATCTGTaGTTCCTGATTTTGGTCATT +
Preference number: 4 (lower is better)
Translates to: TSSYSASWPRLSRRPARCMGTNL*FLILVI
Trigger: AATGACCAAAATCAGGAACCACAGATTTGTGCCCAT...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATACAGTACAAAAAGACTaGCACGCGTGTGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHTVQKD*HACEHP
Trigger: GGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGT...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp TTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAATGTTGTATGCTGGGAATaGCAGGGTCCTTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: FFYSHDHLLIVTFDRQGNVVCWE*QGPLAE
Trigger: CTCGGCCAAAGGACCCTGTCATTCCCAGCATACAAC...ATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTGGGTTCCTCACCTGCTaGAGGCTGCAATTAAACACC +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTGFLTC*RLQLNT
Trigger: GGTGTTTAATTGCAGCCTTCAGCAGGTGAGGAACCC...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCACAAAATCCAGCCCTCTaGGTCTGGACACGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QASLNIKRFDHPVDRLFAQNPAL*VWTRGS
Trigger: TGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTG...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCTTATTTCTCCAACAGTaGGTCTCGTCCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCLFLQQ*VSSSHF
Trigger: GAAGTGACTGGACGAGACGCACTGTTGGAGAAATAA...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCACACACCCTTCTGCTaGTTTGGGTTGAAGGTACTC +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHHTPFC*FGLKVL
Trigger: GAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTG...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTTCCGATCACAAAGGCTaGAAACGCAATGCCCATCAC +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGSDHKG*KRNAHH
Trigger: GTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGA...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTTCCGATCACAAAGGCTaGAAACGCAATGCCCATCAC +
Preference number: 4 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLSDHKG*KRNAHH
Trigger: GTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGA...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATACAAGAAAGGAATGTTaGCTTAACACTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNTRKEC*LNTCQG
Trigger: ACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGT...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCCGACAGGATTTGCCATaGATTTGCATCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLRQDLP*ICILLQ
Trigger: CTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCG...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACGAGACCGACAGGATTTaGCATGCATTTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYETDRI*HAFASC
Trigger: GCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTC...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTGAACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGATTATACAGACAATCTaGCTTGGAGTTTGGGGCATT +
Preference number: 4 (lower is better)
Translates to: VNVFLFCIMAQIIEASSEIIQTI*LGVWGI
Trigger: AATGCCCCAAACTCCAAGGCAGATTGTCTGTATAAT...CTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCACCCAACAAAATGTaGTCTGTTAACACAACCAGC +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQSPNKM*SVNTTS
Trigger: GCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGCACACAAGGATTCTCTaGCGTCCCTCTGATGTTGTG +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLHTRIL*RPSDVV
Trigger: CACAACATCAGAGGGACGGCAGAGAATCCTTGTGTG...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAAAGGCCTGGACAGGATaGGAGGCACTGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLKAWTG*EALTGD
Trigger: GTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTT...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAACTCTCCATCAAGGCCTaGACAGGATGGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQLSIKA*TGWEAL
Trigger: CAGTGCCTCCCATCCTGTCCAGGCCTTGATGGAGAG...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGACACCAAAAACAGTCTaGAGACCCCAGTGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALTPKTV*RPQWQV
Trigger: GACTTGCCACTGGGGTCTCCAGACTGTTTTTGGTGT...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CCA 90 bp CTCCAAAACAAAGTGTGTGCCATTCATCTTGGCCTTGCAGGTAGGATCCAACAGCCCTATGTTGCACTTTaGAGGGAACACTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: LQNKVCAIHLGLAGRIQQPYVAL*REHLIF
Trigger: GAAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGG...CTGTTGGATCCTACCTGCAAGGCCAAGATGAATGGCACACACTTTGTTTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CACCACATGGTGAAAAGCTATAGCGTATTATACAGACAATCTGCCTTGGAGTTTTCCTCATTCTGGGGCTaGCTGGACATCACACACCCT +
Preference number: 4 (lower is better)
Translates to: HHMVKSYSVLYRQSALEFSSFWG*LDITHP
Trigger: AGGGTGTGTGATGTCCAGCCAGCCCCAGAATGAGGA...AAACTCCAAGGCAGATTGTCTGTATAATACGCTATAGCTTTTCACCATGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGACTGTCCCCAAGGGCTaGAACCTGTATCACAATGGA +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALTVPKG*NLYHNG
Trigger: TCCATTGTGATACAGGTTCCAGCCCTTGGGGACAGT...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATACTGTCCCCAAGGGCTaGAACCTGTATCACAATGGA +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHTVPKG*NLYHNG
Trigger: TCCATTGTGATACAGGTTCCAGCCCTTGGGGACAGT...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAATGTTCCTGGAAGCTGCTaGGGTTCCTCACCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FFYSHDHLLIVTFDRQGNVPGSC*GSSPAE
Trigger: TTCAGCAGGTGAGGAACCCCAGCAGCTTCCAGGAAC...ATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTCCGTGGGGCTGTTCCTaGAAGCTGCTGGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFPWGCS*KLLGFL
Trigger: GAGGAACCCCAGCAGCTTCCAGGAACAGCCCCACGG...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCTCTTATTCTGCATCATaGCCCAGATTATCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLSYSAS*PRLSRR
Trigger: ACGCCTCGATAATCTGGGCCATGATGCAGAATAAGA...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AAGGGCTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTCTTATTCTGCATCATaGCCCAGATTATCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: KGWNLYHNGVIVDHTIKGSYSAS*PRLSRR
Trigger: ACGCCTCGATAATCTGGGCCATGATGCAGAATAAGA...GCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTTGGAGAAATTGGATTTaGTTCCTTCATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIWRNWI*FLHAWT
Trigger: GGTCCAAGCATGAAGGAACCAAATCCAATTTCTCCA...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCACCATGGAAAATTGGTaGAGAAATTGGATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: WPRAQERNVALTLVRVQSTMENW*RNWIWF
Trigger: GAACCAAATCCAATTTCTCCACCAATTTTCCATGGT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAACCATGGAAAATTGGTaGAGAAATTGGATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKTMENW*RNWIWF
Trigger: GAACCAAATCCAATTTCTCCACCAATTTTCCATGGT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCACCATGGAAAATTGGTaGAGAAATTGGATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: TSSYSASWPRLSRRPARCTMENW*RNWIWF
Trigger: GAACCAAATCCAATTTCTCCACCAATTTTCCATGGT...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATCAGACCATGGAAAATTaGTGGAGAAATTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNQTMEN*WRNWIW
Trigger: CCAAATCCAATTTCTCCACCAATTTTCCATGGTCTG...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGAGGGTGTCCAGACCATaGAAAATTGGTGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQRVSRP*KIGGEI
Trigger: AATTTCTCCACCAATTTTCCATGGTCTGGACACCCT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTTGACATATTTTGAGTaGAAACACTCACCCTACCAA +
Preference number: 4 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRLTYFE*KHSPYQ
Trigger: TTGGTAGGGTGAGTGTTTCCACTCAAAATATGTCAA...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGTCACATTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGTTTCTGAATCTTTTGTaGGGAAGGGGTCCACTTACA +
Preference number: 4 (lower is better)
Translates to: IVTFDRQGNIHAPLHLFWFLNLL*GRGPLT
Trigger: TGTAAGTGGACCCCTTCCCCACAAAAGATTCAGAAA...CCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR CAA 72 bp TGTGTCCCATGTATAGTGCGCTGCTTTCTGAATCTTTaGTGGGGAAGGGGTCCACTTACACAATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: CVPCIVRCFLNL*WGRGPLTQFLE
Trigger: CTCCAGAAATTGTGTAAGTGGACCCCTTCCCCACAAAAGATTCAGAAAGCAGCGCACTATACATGGGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
3UTR CAA 72 bp GAAGACAAAGCTGAATCGCTTCTTATCCATGTCAGCTaGCGGGATAGGAAAGTGCACTCTCTTGGGACTGTA +
Preference number: 4 (lower is better)
Translates to: EDKAESLLIHVS*RDRKVHSLGTV
Trigger: TACAGTCCCAAGAGAGTGCACTTTCCTATCCCGCAAGCTGACATGGATAAGAAGCGATTCAGCTTTGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR TCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTTCTGCTGGCACAGCCTaGCAAAACAGTGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPSAGTA*QNSEAL
Trigger: GAGAGCTTCACTGTTTTGTCAGGCTGTGCCAGCAGA...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACCTTGAGTTCGGTGAATaGAGTAACTGCTCCATACTC +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYLEFGE*SNCSIL
Trigger: GAGTATGGAGCAGTTACTTCATTCACCGAACTCAAG...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATAGCAAGGTAATTGAGTaGGAGAAAATTCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNSKVIE*EKILPY
Trigger: ATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCT...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCAGGAGCCATTGTGTATaGAGTTATTGGACTATAGCC +
Preference number: 4 (lower is better)
Translates to: ASWWITARGLVNVFLFCIRSHCV*SYWTIA
Trigger: GGCTATAGTCCAATAACTTCATACACAATGGCTCCT...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACAAAATCCAGCCCTCTaGGTCTGGACACGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLQNPAL*VWTRGS
Trigger: TGAGCCTCGTGTCCAGACTCAGAGGGCTGGATTTTG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAGCCCTGGGTGTGGGGTaGATACAACGGGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQALGVG*IQRVIF
Trigger: AAAGATCACCCGTTGTATTCACCCCACACCCAGGGC...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHPLPTP*VWVKLR
Trigger: CCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AAGGGCTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCATCAGGATTACCTACTaGGGTTCCATTCACAGACAA +
Preference number: 4 (lower is better)
Translates to: KGWNLYHNGVIVDHTIKGIRITY*GSIHRQ
Trigger: TTGTCTGTGAATGGAACCTCAGTAGGTAATCCTGAT...GCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTCACACACCCTTCTGCTaGTTTGGGTTGAAGGTACTC +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTHTPFC*FGLKVL
Trigger: GAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTG...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCATCACACACCCTTCTaGTGCTTTGGGTTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHHHTPF*CFGLKV
Trigger: TACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGCTGTTCCTGGAAGCTaGTGGGGTTCCTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRAVPGS*WGSSPA
Trigger: AGCAGGTGAGGAACCCCAGCAGCTTCCAGGAACAGC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHARSEV*IQTKVQ
Trigger: TTGCACCTTTGTCTGGATGCACACTTCTGACCTTGC...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGAGACCGACAGGATTTaGCATGCATTTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVETDRI*HAFASC
Trigger: GCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTGAGACCGACAGGATTTaGCATGCATTTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLETDRI*HAFASC
Trigger: GCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTC...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGGAAATAACAAAAGACTaGAGATACAAGAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSEEITKD*RYKSSA
Trigger: AGCTGAACTCTTGTATCTGCAGTCTTTTGTTATTTC...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCTCACCCAACAAAATGTaGTCTGTTAACACAACCAGC +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCSPNKM*SVNTTS
Trigger: GCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGCCATGTATAGTGCGCTaGTTTCTGAATCTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIEPCIVR*FLNLLW
Trigger: CCACAAAAGATTCAGAAAGCAGCGCACTATACATGG...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR CCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTGCTCTGGACCTGCAGTaGCTAAACAGGAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPALDLQ*LNRSSS
Trigger: TGATGAGCTCCTGTTTAGCCACTGCAGGTCCAGAGC...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAATGCTCTGGACCTGCAGTaGCTAAACAGGAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: FFYSHDHLLIVTFDRQGNALDLQ*LNRSSS
Trigger: TGATGAGCTCCTGTTTAGCCACTGCAGGTCCAGAGC...ATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR CCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCTCTCCATCAAGGCCTaGACAGGATGGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRLSIKA*TGWEAL
Trigger: CAGTGCCTCCCATCCTGTCCAGGCCTTGATGGAGAG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGACATGCACCTCCTGTaGCAGCCCAGTTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRDMHLL*QPSCAS
Trigger: AGAGGCACAACTGGGCTGCCACAGGAGGTGCATGTC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATAACACAACAGACTTGTaGTGGATGTGGACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHNTTDL*WMWTEE
Trigger: CTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTT...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTACACCAAAAACAGTCTaGAGACCCCAGTGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTTPKTV*RPQWQV
Trigger: GACTTGCCACTGGGGTCTCCAGACTGTTTTTGGTGT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATACCCTTCTGCTGCTTTaGGTTGAAGGTACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHTLLLL*VEGTQQ
Trigger: TTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGT...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACTCCCCGAGTAGCCACTaGCCTGAAAAGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYSPSSH*PEKNLF
Trigger: AAAAAGATTCTTTTCAGGCCAGTGGCTACTCGGGGA...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGGAACCTGTATCACAATaGAGTTATAGTAGACCACAC +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQEPVSQ*SYSRPH
Trigger: GTGTGGTCTACTATAACTCCATTGTGATACAGGTTC...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGATCTTCATAACCATCTaGCCAACCACTACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLIFITI*PTTTVP
Trigger: GGGGACAGTAGTGGTTGGCCAGATGGTTATGAAGAT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTAACGTGTCCATTCTCTaGCACAGAGAAGACGCCCTG +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPNVSIL*HREDAL
Trigger: CAGGGCGTCTTCTCTGTGCCAGAGAATGGACACGTT...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCAAGCCTGTGAGGGGCTaGTGGAGAAGACCACCATTT +
Preference number: 4 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTKPVRG*WRRPPF
Trigger: AAATGGTGGTCTTCTCCACCAGCCCCTCACAGGCTT...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CCA 90 bp GCTTCATGGTGGATCACAGCAAGGGGCTTAGTGAACGTCTTCTTATTCTGCATCGATATAAAGAATCTTTaGCCGCATCTCCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: ASWWITARGLVNVFLFCIDIKNL*PHLLTG
Trigger: ACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATC...GATGCAGAATAAGAAGACGTTCACTAAGCCCCTTGCTGTGATCCACCATGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGATGGGCACAAATCTGTaGTTCCTGATTTTGGTCATT +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQMGTNL*FLILVI
Trigger: AATGACCAAAATCAGGAACCACAGATTTGTGCCCAT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGATCTGCCTTGGAGTTTaGGGCATTTTAACAACAGCT +
Preference number: 4 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIEICLGV*GILTTA
Trigger: AGCTGTTGTTAAAATGCCCCAAACTCCAAGGCAGAT...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR TCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACGAGATGGGATTCAGGTaGAGTGTGACCTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINEMGFR*SVTSLC
Trigger: ACAGAGAGAGGTCACACTTCACCTGAATCCCATCTC...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGGGGGTGTGGGGAGTTaGGCAGGAACACAACAGACT +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFGGVGS*AGTQQT
Trigger: AGTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTCTTGAGTTCGGTGAATaGAGTAACTGCTCCATACTC +
Preference number: 4 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLLEFGE*SNCSIL
Trigger: GAGTATGGAGCAGTTACTTCATTCACCGAACTCAAG...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGAGCAAGGTAATTGAGTaGGAGAAAATTCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: FWPRAQERNVALTLVRVQSKVIE*EKILPY
Trigger: ATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGTTGTATGCTGGGAATaGCAGGGTCCTTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRVVCWE*QGPLAE
Trigger: CTCGGCCAAAGGACCCTGTCATTCCCAGCATACAAC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCCCTCTTCTGGCTCTCTaGGACCAGGAAACAGTTGTA +
Preference number: 4 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTPLLAL*DQETVV
Trigger: TACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGG...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGTAAACACCACATGGTaGAAAGCTATAGCGTATTAT +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIVNTTW*KAIAYY
Trigger: ATAATACGCTATAGCTTTTCACCATGTGGTGTTTAC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAGAGATGGGATTCAGGTaGAGTGTGACCACACCCCTT +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLEMGFR*SVTTPL
Trigger: AAGGGGTGTGGTCACACTTCACCTGAATCCCATCTC...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTTTATTTCTCCAACAGTaGGTCTCGTCCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGLFLQQ*VSSSHF
Trigger: GAAGTGACTGGACGAGACGCACTGTTGGAGAAATAA...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACATCTCCCATCTCCTCTaGATTATTTTCAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYISHLL*IIFKPK
Trigger: CTTCGGCTTGAAAATAATGCAGAGGAGATGGGAGAT...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000525962.5
CDS-3UTR GCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTCCAAAACAAAGTGTGTaGCATTCATCTTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVPKQSV*HSSWPC
Trigger: GCAAGGCCAAGATGAATGGCACACACTTTGTTTTGG...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGCTGTTCCTGGAAGCTaGTGGGGTTCCTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFAVPGS*WGSSPA
Trigger: AGCAGGTGAGGAACCCCAGCAGCTTCCAGGAACAGC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAATGCATTAAGACATTTTaGAGTGGTGTATGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKCIKTF*SGVCKY
Trigger: ATACTTGCATACACCACTGCAAAATGTCTTAATGCA...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GGAGTTTCAGCAGAGGCTCACTCAGTAAGTCAGCAGGGACTCTGTAATTTGCCCTGCATTAAGACATTTTaGAGTGGTGTATGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: GVSAEAHSVSQQGLCNLPCIKTF*SGVCKY
Trigger: ATACTTGCATACACCACTGCAAAATGTCTTAATGCA...GGGCAAATTACAGAGTCCCTGCTGACTTACTGAGTGAGCCTCTGCTGAAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCGATTTGCCATGCATTTaGATCTTGCTACAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LIRSSALVLAQGTRKECCDLPCI*ILLQFG
Trigger: ACCAAACTGTAGCAAGATGCAAATGCATGGCAAATC...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCGACAGGATTTGCCATaGATTTGCATCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHRQDLP*ICILLQ
Trigger: CTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATGGCAATCCAAATGAGTaGCCTTTTCCAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHGNPNE*PFPISA
Trigger: TGCTGAGATTGGAAAAGGGCACTCATTTGGATTGCC...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAGCTCTGGACCTGCAGTaGCTAAACAGGAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLALDLQ*LNRSSS
Trigger: TGATGAGCTCCTGTTTAGCCACTGCAGGTCCAGAGC...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGGCTCTGGACCTGCAGTaGCTAAACAGGAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: FALRHFAVVYASMGRNRKALDLQ*LNRSSS
Trigger: TGATGAGCTCCTGTTTAGCCACTGCAGGTCCAGAGC...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACAGTTGTGCCTCTGCTaGCACAGCCTGACAAAACAG +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLQLCLC*HSLTKQ
Trigger: CTGTTTTGTCAGGCTGTGCCAGCAGAGGCACAACTG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GAACACTTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGACATGCACCTCCTGTaGCAGCCCAGTTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: EHLIFPHFNINVSCYLEFDMHLL*QPSCAS
Trigger: AGAGGCACAACTGGGCTGCCACAGGAGGTGCATGTC...GAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAAGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTCCCTATGTTGCACTTTaGAGGGAACACTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVPYVAL*REHLIF
Trigger: GAAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGG...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAATGACAGGGTCCTTTaGCCGAGGGAGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRNDRVL*PREPIF
Trigger: GAAGATGGGCTCCCTCGGCCAAAGGACCCTGTCATT...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACCCTTGCACCTCTTCTaGCTCTCTGAGACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLPLHLF*LSETRK
Trigger: TTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTTCCCCGAGTAGCCACTaGCCTGAAAAGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVSPSSH*PEKNLF
Trigger: AAAAAGATTCTTTTCAGGCCAGTGGCTACTCGGGGA...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTACTGTCCCCAAGGGCTaGAACCTGTATCACAATGGA +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPTVPKG*NLYHNG
Trigger: TCCATTGTGATACAGGTTCCAGCCCTTGGGGACAGT...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTTTAGATTCTGCTTCATaGTGGATCACAGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTLDSAS*WITARG
Trigger: GCCCCTTGCTGTGATCCACCATGAAGCAGAATCTAA...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCACAGACCATGGAAAATTaGTGGAGAAATTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAQTMEN*WRNWIW
Trigger: CCAAATCCAATTTCTCCACCAATTTTCCATGGTCTG...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCCAGGGCCCCAAATTATaGATGTTCTCACCTGGACAA +
Preference number: 4 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGQGPKL*MFSPGQ
Trigger: TTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTG...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACATTGACATATTTTGAGTaGAAACACTCACCCTACCAA +
Preference number: 4 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTLTYFE*KHSPYQ
Trigger: TTGGTAGGGTGAGTGTTTCCACTCAAAATATGTCAA...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATATTCAGATAACCAACTaGAGACCGACAGGATTTGCC +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHIQITN*RPTGFA
Trigger: GGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAAT...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGATTCAGATAACCAACTaGAGACCGACAGGATTTGCC +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLIQITN*RPTGFA
Trigger: GGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAAT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
3UTR CAA 72 bp CCTATCAGGGTTCGAATATGGAGAGATAAAGCACGTTaGGATGGCAAATCCCAGTTCTTGTTCAGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: PIRVRIWRDKAR*DGKSQFLFSLS
Trigger: ACTAAGGCTGAACAAGAACTGGGATTTGCCATCCAAACGTGCTTTATCTCTCCATATTCGAACCCTGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR TCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGTCTGCTGGCACAGCCTaGCAAAACAGTGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRSAGTA*QNSEAL
Trigger: GAGAGCTTCACTGTTTTGTCAGGCTGTGCCAGCAGA...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFVVDVD*GDGIQV
Trigger: CACCTGAATCCCATCTCCTCAGTCCACATCCACCAC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGTTTGGAGGGAACACTTaGTCTTCCCCCACTTTAATA +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLFGGNT*SSPTLI
Trigger: TATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAA...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAAGCAAGGTAATTGAGTaGGAGAAAATTCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKASKVIE*EKILPY
Trigger: ATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCT...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCAGATTCCCTTGGGTTaGAGGAATGTCATCTCTTAT +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHQIPLG*RNVISY
Trigger: ATAAGAGATGACATTCCTTCAACCCAAGGGAATCTG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTTCTCATTGTCACATTTaGCAGACAGGGCAATATCCA +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVSHCHI*QTGQYP
Trigger: TGGATATTGCCCTGTCTGTCAAATGTGACAATGAGA...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCGATTTCAGGTCGGGTaGACAGGGAAGCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRRFQVG*TGKHLL
Trigger: AAGGAGATGCTTCCCTGTTCACCCGACCTGAAATCG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GAACACTTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGCCCTGGGTGTGGGGTaGATACAACGGGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: EHLIFPHFNINVSCYLEFALGVG*IQRVIF
Trigger: AAAGATCACCCGTTGTATTCACCCCACACCCAGGGC...GAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAAGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCTTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLFSFLT*ILVWYR
Trigger: TCTGTACCACACTAGAATTCATGTGAGAAAGCTAAA...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACCCTTTACCAACTCCTTaGGTCTGGGTAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINPLPTP*VWVKLR
Trigger: CCTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGG...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTAGCACAGACAATCTTTaGAAATCAGAAGTAGTCTTA +
Preference number: 4 (lower is better)
Translates to: PQVVAARSEVCIQTKVQISTDNL*KSEVVL
Trigger: TAAGACTACTTCTGATTTGCAAAGATTGTCTGTGCT...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTTTATTTCTCCAACAGTaGGTCTCGTCCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTLFLQQ*VSSSHF
Trigger: GAAGTGACTGGACGAGACGCACTGTTGGAGAAATAA...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACACACACCCTTCTGCTaGTTTGGGTTGAAGGTACTC +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLHTPFC*FGLKVL
Trigger: GAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACCATCACACACCCTTCTaGTGCTTTGGGTTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINHHTPF*CFGLKV
Trigger: TACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGGCAACTTCTGGGGGTaGTTCTCCATCTTCGTACAC +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRGNFWG*FSIFVH
Trigger: GTGTACGAAGATGGAGAAGCACCCCCAGAAGTTGCC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACGCAAGGTCAGAAGTGTaGATCCAGACAAAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINARSEV*IQTKVQ
Trigger: TTGCACCTTTGTCTGGATGCACACTTCTGACCTTGC...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACACAAGAAAGGAATGTTaGCTTAACACTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYTRKEC*LNTCQG
Trigger: ACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGT...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACGAGACCGACAGGATTTaGCATGCATTTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINETDRI*HAFASC
Trigger: GCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTC...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTCTGATGTTGTGTCCTTaGTTTGACTCAATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVLMLCP*FDSMLP
Trigger: TGGCAACATTGAGTCAAAGCAAGGACACAACATCAG...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATTCATCAGGGCAAAGATaGCAATCACATAATGGGAAG +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHSSGQR*QSHNGK
Trigger: CTTCCCATTATGTGATTGCCATCTTTGCCCTGATGA...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCAAACACAACAGACTTGTaGTGGATGTGGACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: QASLNIKRFDHPVDRLFANTTDL*WMWTEE
Trigger: CTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTT...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGATGTTCATTTCCATaGGGGAAGTTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYRCSFP*GKFLSS
Trigger: AGAAGAAAGGAACTTCCCCCATGGAAATGAACATCT...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
CDS-3UTR CCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACACCCTTCTGCTGCTTTaGGTTGAAGGTACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINTLLLL*VEGTQQ
Trigger: TTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGT...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACATCTTCATAACCATCTaGCCAACCACTACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINIFITI*PTTTVP
Trigger: GGGGACAGTAGTGGTTGGCCAGATGGTTATGAAGAT...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTGAGATAAAGCACGTTTaGATGGCAAATCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGEIKHV*MANPSS
Trigger: AGAACTGGGATTTGCCATCCAAACGTGCTTTATCTC...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTTCTTATTCTGCATCATaGCCCAGATTATCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTSYSAS*PRLSRR
Trigger: ACGCCTCGATAATCTGGGCCATGATGCAGAATAAGA...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCATGGTTCCTTCATGCTTaGACCTTTTTCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAWFLHA*TFFFRF
Trigger: GAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCA...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAAATTGGTGGAGAAATTaGATTTGGTTCCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKANWWRN*IWFLHA
Trigger: AGCATGAAGGAACCAAATCCAATTTCTCCACCAATT...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCATGGATGTTCTCACCTaGACAAAGCAGCATTTTAAA +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLMDVLT*TKQHFK
Trigger: TTTAAAATGCTGCTTTGTCCAGGTGAGAACATCCAT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTCAGGGCCCCAAATTATaGATGTTCTCACCTGGACAA +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPQGPKL*MFSPGQ
Trigger: TTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTG...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLTGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATTCAGATAACCAACTaGAGACCGACAGGATTTGCC +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTIQITN*RPTGFA
Trigger: GGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAAT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTTCTGCTGGCACAGCCTaGCAAAACAGTGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFSAGTA*QNSEAL
Trigger: GAGAGCTTCACTGTTTTGTCAGGCTGTGCCAGCAGA...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATTTTTCAAGCCGAAGATaGAATCTATTAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHFSSRR*NLLATG
Trigger: TCCTGTGGCTAATAGATTTCATCTTCGGCTTGAAAA...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCCTCTTCTGGCTCTCTaGGACCAGGAAACAGTTGTA +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRPLLAL*DQETVV
Trigger: TACAACTGTTTCCTGGTCTCAGAGAGCCAGAAGAGG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATAAATCCATTATCACCTaGCTCCAGATCTTCATAACC +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHKSIIT*LQIFIT
Trigger: GGTTATGAAGATCTGGAGTCAGGTGATAATGGATTT...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTAAATCCATTATCACCTaGCTCCAGATCTTCATAACC +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGKSIIT*LQIFIT
Trigger: GGTTATGAAGATCTGGAGTCAGGTGATAATGGATTT...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCATCTCCCATCTCCTCTaGATTATTTTCAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGISHLL*IIFKPK
Trigger: CTTCGGCTTGAAAATAATGCAGAGGAGATGGGAGAT...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR GCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTAGGCTGCAAACGCAATaGCCATCACGGTTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFRLQTQ*PSRLGC
Trigger: ACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGATTTGGTTCCTTCATGCTTGGACCTTTTTCTTTAGATTCTGCTTCATGGACAACAGACTTGTGGTaGATGTGGACTGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: IGFGSFMLGPFSLDSASWTTDLW*MWTEEM
Trigger: CATCTCCTCAGTCCACATCCACCACAAGTCTGTTGT...CCATGAAGCAGAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCAAATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTAGATGTTCATTTCCATaGGGGAAGTTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GVCKYGKKQEADKVISIGRCSFP*GKFLSS
Trigger: AGAAGAAAGGAACTTCCCCCATGGAAATGAACATCT...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAACCCTTCTGCTGCTTTaGGTTGAAGGTACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLTLLLL*VEGTQQ
Trigger: TTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGT...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTCCCTTGCACCTCTTCTaGCTCTCTGAGACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFPLHLF*LSETRK
Trigger: TTTCCTGGTCTCAGAGAGCCAGAAGAGGTGCAAGGG...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATGAACCTGTATCACAATaGAGTTATAGTAGACCACAC +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHEPVSQ*SYSRPH
Trigger: GTGTGGTCTACTATAACTCCATTGTGATACAGGTTC...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATGAACCTGTATCACAATaGAGTTATAGTAGACCACAC +
Preference number: 4 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHEPVSQ*SYSRPH
Trigger: GTGTGGTCTACTATAACTCCATTGTGATACAGGTTC...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGAACCTGTATCACAATaGAGTTATAGTAGACCACAC +
Preference number: 4 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVEPVSQ*SYSRPH
Trigger: GTGTGGTCTACTATAACTCCATTGTGATACAGGTTC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTATTAGATTCTGCTTCATaGTGGATCACAGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLLDSAS*WITARG
Trigger: GCCCCTTGCTGTGATCCACCATGAAGCAGAATCTAA...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACTGGTTCCTTCATGCTTaGACCTTTTTCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: SDNQLETDRICHAFASCYWFLHA*TFFFRF
Trigger: GAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCA...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTAGACCCCACAGGTTGTaGCAGCAAGGTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFRPHRL*QQGQKC
Trigger: ACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCT...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CAA 72 bp AAAGAATCTTTTTCTACAGCCACGATCATCTTCTCATaGTCACATTTGACAGACAGGGCAATATCCACGCTC +
Preference number: 4 (lower is better)
Translates to: KESFSTATIIFS*SHLTDRAISTL
Trigger: GAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGATTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTAGCAAGGTAATTGAGTaGGAGAAAATTCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLSKVIE*EKILPY
Trigger: ATAGGGAAGAATTTTCTCTCACTCAATTACCTTGCT...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCACAGATTCCCTTGGGTTaGAGGAATGTCATCTCTTAT +
Preference number: 4 (lower is better)
Translates to: QASLNIKRFDHPVDRLFAQIPLG*RNVISY
Trigger: ATAAGAGATGACATTCCTTCAACCCAAGGGAATCTG...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTTTTTCAAGCCGAAGATaGAATCTATTAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTFSSRR*NLLATG
Trigger: TCCTGTGGCTAATAGATTTCATCTTCGGCTTGAAAA...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACTCTCATTGTCACATTTaGCAGACAGGGCAATATCCA +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINSHCHI*QTGQYP
Trigger: TGGATATTGCCCTGTCTGTCAAATGTGACAATGAGA...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTAAACACCACATGGTaGAAAGCTATAGCGTATTAT +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALVNTTW*KAIAYY
Trigger: ATAATACGCTATAGCTTTTCACCATGTGGTGTTTAC...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATTCTTCACAAAATAGCTaGCACACTGAACAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHSSQNS*HTEQRK
Trigger: TTTTCTCTGTTCAGTGTGTCAGCTATTTTGTGAAGA...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGGGCAATCCAAATGAGTaGCCTTTTCCAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FALRHFAVVYASMGRNRKGNPNE*PFPISA
Trigger: TGCTGAGATTGGAAAAGGGCACTCATTTGGATTGCC...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTCTGCTTCCTTGTGTGTaGTGGCATCCATCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFLLPCV*WHPSAD
Trigger: ATCTGCAGATGGATGCCAGCACACACAAGGAAGCAG...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGACAACAGACTTGTGGTaGATGTGGACTGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRTTDLW*MWTEEM
Trigger: CATCTCCTCAGTCCACATCCACCACAAGTCTGTTGT...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTGAGATAAAGCACGTTTaGATGGCAAATCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPEIKHV*MANPSS
Trigger: AGAACTGGGATTTGCCATCCAAACGTGCTTTATCTC...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
CDS-3UTR CCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGTGGTTCCTTCATGCTTaGACCTTTTTCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALWFLHA*TFFFRF
Trigger: GAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCA...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTTGGAGAAATTGGATTTaGTTCCTTCATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: RICHAFASCYSLVFMKGPWRNWI*FLHAWT
Trigger: GGTCCAAGCATGAAGGAACCAAATCCAATTTCTCCA...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGAATTGGTGGAGAAATTaGATTTGGTTCCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLNWWRN*IWFLHA
Trigger: AGCATGAAGGAACCAAATCCAATTTCTCCACCAATT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTCAGACCATGGAAAATTaGTGGAGAAATTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTQTMEN*WRNWIW
Trigger: CCAAATCCAATTTCTCCACCAATTTTCCATGGTCTG...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGATGGATGTTCTCACCTaGACAAAGCAGCATTTTAAA +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLMDVLT*TKQHFK
Trigger: TTTAAAATGCTGCTTTGTCCAGGTGAGAACATCCAT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATATGGATGTTCTCACCTaGACAAAGCAGCATTTTAAA +
Preference number: 4 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHMDVLT*TKQHFK
Trigger: TTTAAAATGCTGCTTTGTCCAGGTGAGAACATCCAT...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTATGGATGTTCTCACCTaGACAAAGCAGCATTTTAAA +
Preference number: 4 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLMDVLT*TKQHFK
Trigger: TTTAAAATGCTGCTTTGTCCAGGTGAGAACATCCAT...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALTGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCACACTTACACAATTTCTaGAGTTTCAGCAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QASLNIKRFDHPVDRLFAHLHNF*SFSRGS
Trigger: TGAGCCTCTGCTGAAACTCCAGAAATTGTGTAAGTG...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR TCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAATTTGGAGGGAACACTTaGTCTTCCCCCACTTTAATA +
Preference number: 4 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQFGGNT*SSPTLI
Trigger: TATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAA...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACACTCAGCAAGGTAATTaGGTGAGAGAAAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINTQQGN*VRENSS
Trigger: GGAAGAATTTTCTCTCACTCAATTACCTTGCTGAGT...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCAGATTCCCTTGGGTTaGAGGAATGTCATCTCTTAT +
Preference number: 4 (lower is better)
Translates to: FALRHFAVVYASMGRNRKQIPLG*RNVISY
Trigger: ATAAGAGATGACATTCCTTCAACCCAAGGGAATCTG...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAAGGAGCCATTGTGTATaGAGTTATTGGACTATAGCC +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLRSHCV*SYWTIA
Trigger: GGCTATAGTCCAATAACTTCATACACAATGGCTCCT...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACTTTTCAAGCCGAAGATaGAATCTATTAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINFSSRR*NLLATG
Trigger: TCCTGTGGCTAATAGATTTCATCTTCGGCTTGAAAA...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAATCTCATTGTCACATTTaGCAGACAGGGCAATATCCA +
Preference number: 4 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQSHCHI*QTGQYP
Trigger: TGGATATTGCCCTGTCTGTCAAATGTGACAATGAGA...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACAAATCCATTATCACCTaGCTCCAGATCTTCATAACC +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINKSIIT*LQIFIT
Trigger: GGTTATGAAGATCTGGAGTCAGGTGATAATGGATTT...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGTAAGGCAATCCAAATaGGTGCCCTTTTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRVRQSK*VPFSNL
Trigger: GAGATTGGAAAAGGGCACTCATTTGGATTGCCTTAC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAACCACAAGGAGGTATCACTaGGCTTATTTTAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PNKMCSVNTTSSTIIIQTTRRYH*AYFSCK
Trigger: TTTGCAGCTAAAATAAGCTCAGTGATACCTCCTTGT...GGTTTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAATCAGGATTACCTACTaGGGTTCCATTCACAGACAA +
Preference number: 4 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQIRITY*GSIHRQ
Trigger: TTGTCTGTGAATGGAACCTCAGTAGGTAATCCTGAT...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGTTGTGTCCTTGCTTTaGCTCAATGTTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFVVSLL*LNVARA
Trigger: AGCTCTGGCAACATTGAGTCAAAGCAAGGACACAAC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR GCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAATCTCCCATCTCCTCTaGATTATTTTCAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLISHLL*IIFKPK
Trigger: CTTCGGCTTGAAAATAATGCAGAGGAGATGGGAGAT...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000525962.5
ENST00000532540.5
CDS-3UTR GCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCCAAAACAAAGTGTGTaGCATTCATCTTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRPKQSV*HSSWPC
Trigger: GCAAGGCCAAGATGAATGGCACACACTTTGTTTTGG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGTGCATTAAGACATTTTaGAGTGGTGTATGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLCIKTF*SGVCKY
Trigger: ATACTTGCATACACCACTGCAAAATGTCTTAATGCA...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACGATTTGCCATGCATTTaGATCTTGCTACAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINDLPCI*ILLQFG
Trigger: ACCAAACTGTAGCAAGATGCAAATGCATGGCAAATC...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGAAATAACAAAAGACTaGAGATACAAGAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VVYASMGRNRKLIRSSALEITKD*RYKSSA
Trigger: AGCTGAACTCTTGTATCTGCAGTCTTTTGTTATTTC...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR GCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAACACACTCACAATCATaGCCACTAAGAACACAAGCA +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLTHSQS*PLRTQA
Trigger: TGCTTGTGTTCTTAGTGGGCATGATTGTGAGTGTGT...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTACAACAGACTTGTGGTaGATGTGGACTGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFTTDLW*MWTEEM
Trigger: CATCTCCTCAGTCCACATCCACCACAAGTCTGTTGT...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GAACACTTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCAACACAACAGACTTGTaGTGGATGTGGACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: EHLIFPHFNINVSCYLEFNTTDL*WMWTEE
Trigger: CTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTT...GAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAAGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAAGAAAGTGCACTCTCTTaGGACTGTAGAATTTCACAG +
Preference number: 4 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQESALS*DCRISQ
Trigger: CTGTGAAATTCTACAGTCCCAAGAGAGTGCACTTTC...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR CCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGTGGAGAAATTGGATTTaGTTCCTTCATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: FALRHFAVVYASMGRNRKWRNWI*FLHAWT
Trigger: GGTCCAAGCATGAAGGAACCAAATCCAATTTCTCCA...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTAATTGGTGGAGAAATTaGATTTGGTTCCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTNWWRN*IWFLHA
Trigger: AGCATGAAGGAACCAAATCCAATTTCTCCACCAATT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTACCATGGAAAATTGGTaGAGAAATTGGATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTTMENW*RNWIWF
Trigger: GAACCAAATCCAATTTCTCCACCAATTTTCCATGGT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGGATATAAAGAATCTTTaGCCGCATCTCCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: FALRHFAVVYASMGRNRKDIKNL*PHLLTG
Trigger: ACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATC...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTTTGACATATTTTGAGTaGAAACACTCACCCTACCAA +
Preference number: 4 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTLTYFE*KHSPYQ
Trigger: TTGGTAGGGTGAGTGTTTCCACTCAAAATATGTCAA...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CAA 72 bp TCTTGTTTTACATCTTGGTTCAGATATAAAGAATCTTaGGCCGCATCTCCTCACTGGTTCTACTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: SCFTSWFRYKES*AASPHWFYYLA
Trigger: AGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATGTAAAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CAA 72 bp GCTATAGCGTATTATACAGACAATCTGCCTTGGAGTTaGGGGCATTTTAACAACAGCTTCAGCATCAAACAA +
Preference number: 4 (lower is better)
Translates to: AIAYYTDNLPWS*GHFNNSFSIKQ
Trigger: TTGTTTGATGCTGAAGCTGTTGTTAAAATGCCCCAAACTCCAAGGCAGATTGTCTGTATAATACGCTATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
3UTR CAA 72 bp AGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTaGACAGACTTTTTGCACTTCAAGATCAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: RLPLTSKDLITQ*TDFLHFKIRMR
Trigger: TCTCATCCTGATCTTGAAGTGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 72 bp AGAGATAAAGCACGTTTGGATGGCAAATCCCAGTTCTaGTTCAGCCTTAGTAACAGATACCTCAACATAAAC +
Preference number: 4 (lower is better)
Translates to: RDKARLDGKSQF*FSLSNRYLNIN
Trigger: GTTTATGTTGAGGTATCTGTTACTAAGGCTGAACAAGAACTGGGATTTGCCATCCAAACGTGCTTTATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR TCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTATTTTCAAGCCGAAGATaGAATCTATTAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLFSSRR*NLLATG
Trigger: TCCTGTGGCTAATAGATTTCATCTTCGGCTTGAAAA...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAATTTTCAAGCCGAAGATaGAATCTATTAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQFSSRR*NLLATG
Trigger: TCCTGTGGCTAATAGATTTCATCTTCGGCTTGAAAA...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACTTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: YKESLAASPHWFYYLAINFSFLT*ILVWYR
Trigger: TCTGTACCACACTAGAATTCATGTGAGAAAGCTAAA...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CACCACATGGTGAAAAGCTATAGCGTATTATACAGACAATCTGCCTTGGAGTTTTCTTCACAAAATAGCTaGCACACTGAACAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HHMVKSYSVLYRQSALEFSSQNS*HTEQRK
Trigger: TTTTCTCTGTTCAGTGTGTCAGCTATTTTGTGAAGA...AAACTCCAAGGCAGATTGTCTGTATAATACGCTATAGCTTTTCACCATGTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR TCA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAAAATTTCAGGTTCAGCTaGAGGACTCTAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: LIFPHFNINVSCYLEFGENFRFS*RTLAHS
Trigger: ACTGTGTGCTAGAGTCCTTCAGCTGAACCTGAAATT...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAACAAGAAAGGAATGTTaGCTTAACACTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLTRKEC*LNTCQG
Trigger: ACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGT...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAATCCATTATCACCTaGCTCCAGATCTTCATAACC +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRKSIIT*LQIFIT
Trigger: GGTTATGAAGATCTGGAGTCAGGTGATAATGGATTT...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGTTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: FALRHFAVVYASMGRNRKFSFLT*ILVWYR
Trigger: TCTGTACCACACTAGAATTCATGTGAGAAAGCTAAA...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTATTTAGCTTTCTCACATaGATTCTAGTGTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLFSFLT*ILVWYR
Trigger: TCTGTACCACACTAGAATTCATGTGAGAAAGCTAAA...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGATTTGCCATGCATTTaGATCTTGCTACAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRDLPCI*ILLQFG
Trigger: ACCAAACTGTAGCAAGATGCAAATGCATGGCAAATC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGAGATAAAGCACGTTTaGATGGCAAATCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFEIKHV*MANPSS
Trigger: AGAACTGGGATTTGCCATCCAAACGTGCTTTATCTC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CCA 90 bp GAACACTTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCTGGAGAAATTGGATTTaGTTCCTTCATGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: EHLIFPHFNINVSCYLEFWRNWI*FLHAWT
Trigger: GGTCCAAGCATGAAGGAACCAAATCCAATTTCTCCA...GAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAAGTGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCAGACCATGGAAAATTaGTGGAGAAATTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRQTMEN*WRNWIW
Trigger: CCAAATCCAATTTCTCCACCAATTTTCCATGGTCTG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGACTGGTTCTACTATCTaGCTATTAACCCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: FALRHFAVVYASMGRNRKTGSTI*LLTLYQ
Trigger: TTGGTAAAGGGTTAATAGCCAGATAGTAGAACCAGT...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGTTGACATATTTTGAGTaGAAACACTCACCCTACCAA +
Preference number: 4 (lower is better)
Translates to: FALRHFAVVYASMGRNRKLTYFE*KHSPYQ
Trigger: TTGGTAGGGTGAGTGTTTCCACTCAAAATATGTCAA...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
3UTR CAA 72 bp GATCAGGATGAGATTTTTGACCACTTCAAGATCCTCTaGAGAAGGTCTTATATCAATTGTTATATCCACCTG +
Preference number: 4 (lower is better)
Translates to: DQDEIFDHFKIL*RRSYINCYIHL
Trigger: CAGGTGGATATAACAATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR TCA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTACAAGGAGGTATCACTaGGCTTATTTTAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFTRRYH*AYFSCK
Trigger: TTTGCAGCTAAAATAAGCTCAGTGATACCTCCTTGT...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000533089.5
CDS-3UTR GCA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAAGATTTGCCATGCATTTaGATCTTGCTACAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LIFPHFNINVSCYLEFGEDLPCI*ILLQFG
Trigger: ACCAAACTGTAGCAAGATGCAAATGCATGGCAAATC...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS-3UTR GCA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGTTGCAATTTTCAAACTaGCACCAAAGATCTACACAC +
Preference number: 4 (lower is better)
Translates to: KFALRHFAVVYASMGRNRLQFSN*HQRSTH
Trigger: GTGTGTAGATCTTTGGTGGCAGTTTGAAAATTGCAA...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CCA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAATGGTTCCTTCATGCTTaGACCTTTTTCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: LIFPHFNINVSCYLEFGEWFLHA*TFFFRF
Trigger: GAATCTAAAGAAAAAGGTCCAAGCATGAAGGAACCA...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CCA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTAATTGGTGGAGAAATTaGATTTGGTTCCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSNWWRN*IWFLHA
Trigger: AGCATGAAGGAACCAAATCCAATTTCTCCACCAATT...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
3UTR CAA 72 bp ATATTAGGAATGGGCACAAATCTGTGGTTCCTGATTTaGGTCATTTTCAATTTCTGTAGGCCTGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ILGMGTNLWFLI*VIFNFCRPVRN
Trigger: ATTTCTTACAGGCCTACAGAAATTGAAAATGACCAAAATCAGGAACCACAGATTTGTGCCCATTCCTAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR GCA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTTGCATTAAGACATTTTaGAGTGGTGTATGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSCIKTF*SGVCKY
Trigger: ATACTTGCATACACCACTGCAAAATGTCTTAATGCA...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS GCA 90 bp CGGGAATCGCGCAGGGAAAGTGGCCGGGGCGCGAGAGCCGCCGACTaGCCTCCTTCACTCGCTGGGAAGAGGAAAGTGCCGCTCGGCGTC +
Preference number: 5 (lower is better)
Translates to: RESRRESGRGARAAD*PPSLAGKRKVPLGV
Trigger: GACGCCGAGCGGCACTTTCCTCTTCCCAGCGAGTGAAGGAGGGCAGTCGGCGGCTCTCGCGCCCCGGCCACTTTCCCTGCGCGATTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533370.1
CDS CCA 90 bp GACTCTCACCTCCTGCAGGGAGCTCCGGGAATCGCGCAGGGAAAGTaGCCGGGGCGCGAGAGCCGCCGACTGCCCTCCTTCACTCGCTGG +
Preference number: 5 (lower is better)
Translates to: DSHLLQGAPGIAQGK*PGRESRRLPSFTRW
Trigger: CCAGCGAGTGAAGGAGGGCAGTCGGCGGCTCTCGCGCCCCGGCCACTTTCCCTGCGCGATTCCCGGAGCTCCCTGCAGGAGGTGAGAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000417833.2
CDS CCA 90 bp TGCCTCGGAGGCGGTGTGTCCAGCGGAGATCCACCCGCAGCAAGTTaGAGGAAAGCGGCGGCAAGTTTCCCCGCCCAGCGCTCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: CLGGGVSSGDPPAAS*RKAAASFPAQRSAA
Trigger: CGCCGCCGAGCGCTGGGCGGGGAAACTTGCCGCCGCTTTCCTCCAACTTGCTGCGGGTGGATCTCCGCTGGACACACCGCCTCCGAGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000465892.6
CDS CCA 90 bp GAGCTCGGAGGCGGTGTGTCCAGCGGAGATCCACCCGCAGCAAGTTaGAGGAAAGCGGCGGCAAGTTTCCCCGCCCAGCGCTCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: ELGGGVSSGDPPAAS*RKAAASFPAQRSAA
Trigger: CGCCGCCGAGCGCTGGGCGGGGAAACTTGCCGCCGCTTTCCTCCAACTTGCTGCGGGTGGATCTCCGCTGGACACACCGCCTCCGAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417833.2
CDS-3UTR CAA 90 bp CTTGGCCTTGCAGGTAGGATCCAACAGGGTGACGTCCATCCCCGAGTAGCCACTGCCAAGATCGCGCCATaGCACTCCAGCCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LGLAGRIQQGDVHPRVATAKIAP*HSSLQW
Trigger: CCACTGCAGGCTGGAGTGCAATGGCGCGATCTTGGC...AGTGGCTACTCGGGGATGGACGTCACCCTGTTGGATCCTACCTGCAAGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CAA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATCCTGTGGCAGCCCAGTaGTGCCTCTGCTGGCACAGC +
Preference number: 5 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNPVAAQ*CLCWHS
Trigger: GCTGTGCCAGCAGAGGCACAACTGGGCTGCCACAGG...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCCGGAAGGCCTCCATTTaGGCCTTCCCCTCCCCGGAT +
Preference number: 5 (lower is better)
Translates to: WPRAQERNVALTLVRVQSRKASI*AFPSPD
Trigger: ATCCGGGGAGGGGAAGGCCAAAATGGAGGCCTTCCG...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTCCTGTGGCAGCCCAGTaGTGCCTCTGCTGGCACAGC +
Preference number: 5 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIPVAAQ*CLCWHS
Trigger: GCTGTGCCAGCAGAGGCACAACTGGGCTGCCACAGG...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GAGAATAGATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGAGGGGGTGTGGGGAGTaGAGCAGGAACACAACAGAC +
Preference number: 5 (lower is better)
Translates to: ENRCTTRPPSGVLRSQRLRGCGE*SRNTTD
Trigger: GTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCT...CAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATCTATTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATCGGAAGGCCTCCATTTaGGCCTTCCCCTCCCCGGAT +
Preference number: 5 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNRKASI*AFPSPD
Trigger: ATCCGGGGAGGGGAAGGCCAAAATGGAGGCCTTCCG...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTCGGGGAGGTGGGGACTaGCTGCCTTCCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIRGGGD*LPSCCL
Trigger: GAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCCG...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGCCATTGGTCCTGCCCTaGGCAGTAGCTGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRPLVLP*AVAELS
Trigger: GCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGG...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCCCATTGGTCCTGCCCTaGGCAGTAGCTGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TSSYSASWPRLSRRPARCPLVLP*AVAELS
Trigger: GCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGG...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AACCATCTGGCCAACCACTACTGTCCCCAAGGGCTGGAACCTGTATCACAATGGCCATTGGTCCTGCCCTaGGCAGTAGCTGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: NHLANHYCPQGLEPVSQWPLVLP*AVAELS
Trigger: GCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGG...CCATTGTGATACAGGTTCCAGCCCTTGGGGACAGTAGTGGTTGGCCAGATGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS TCA 90 bp GAAGCTCTCCATCAAGGCCTGGACAGGATGGGAGGCACTGACAGGTaGCAGTTCACACAGTGCACCAGGCTCTGGACCTGTAATCCTAGT +
Preference number: 5 (lower is better)
Translates to: EALHQGLDRMGGTDR*QFTQCTRLWTCNPS
Trigger: ACTAGGATTACAGGTCCAGAGCCTGGTGCACTGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTTGATGGAGAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGAGGGGGTGTGGGGAGTaGAGCAGGAACACAACAGAC +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRRGCGE*SRNTTD
Trigger: GTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AGACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTCGGGGAGGTGGGGACTaGCTGCCTTCCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: RLSWKYLGKETEGLHFGLRGGGD*LPSCCL
Trigger: GAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCCG...AAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTTCCCCTGTGGCAGCCCAGTaGTGCCTCTGCTGGCACAGC +
Preference number: 5 (lower is better)
Translates to: TVRVSRPWKIGGEIGFGSPVAAQ*CLCWHS
Trigger: GCTGTGCCAGCAGAGGCACAACTGGGCTGCCACAGG...GGAACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCACGGAAGGCCTCCATTTaGGCCTTCCCCTCCCCGGAT +
Preference number: 5 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKARKASI*AFPSPD
Trigger: ATCCGGGGAGGGGAAGGCCAAAATGGAGGCCTTCCG...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGCCAGACCATGGAAAATaGGTGGAGAAATTGGATTTG +
Preference number: 5 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQPDHGK*VEKLDL
Trigger: CAAATCCAATTTCTCCACCAATTTTCCATGGTCTGG...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCCTGTGGCAGCCCAGTaGTGCCTCTGCTGGCACAGC +
Preference number: 5 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHPVAAQ*CLCWHS
Trigger: GCTGTGCCAGCAGAGGCACAACTGGGCTGCCACAGG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAAATATCCACGCTCCCTaGCACCTCTTCTGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKNIHAP*HLFWLS
Trigger: AGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGAATATCCACGCTCCCTaGCACCTCTTCTGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SSVVQKPRVMFILALGVGNIHAP*HLFWLS
Trigger: AGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATT...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCCCATTCATCTTGGCCTaGCAGGTAGGATCCAACAGG +
Preference number: 5 (lower is better)
Translates to: WPRAQERNVALTLVRVQSPFILA*QVGSNR
Trigger: CCTGTTGGATCCTACCTGCAAGGCCAAGATGAATGG...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GATGTACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAAGGCTGCAAACGCGGCAAATCCCAGTTCTaGTTCAGCCTTAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: DVPQGPRQECSDHKGCKRGKSQF*FSLSNR
Trigger: TCTGTTACTAAGGCTGAACAAGAACTGGGATTTGCC...GCGTTTGCAGCCTTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CAA 90 bp CTTGGCCTTGCAGGTAGGATCCAACAGGGTGACGTCCATCCCCGAGTAGCCACTGTGGAGAAATTGGATTaGGTTCCTTCATGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: LGLAGRIQQGDVHPRVATVEKLD*VPSCLD
Trigger: GTCCAAGCATGAAGGAACCAAATCCAATTTCTCCAC...AGTGGCTACTCGGGGATGGACGTCACCCTGTTGGATCCTACCTGCAAGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTCGGGGAGGTGGGGACTaGCTGCCTTCCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: GVCKYGKKQEADKVISIGRGGGD*LPSCCL
Trigger: GAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCCG...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTCGGGGAGGTGGGGACTaGCTGCCTTCCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVRGGGD*LPSCCL
Trigger: GAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCCG...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCACACGAGGCTCAGCCATaGGTCCTGCCCTTGGCAGTA +
Preference number: 5 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAHEAQP*VLPLAV
Trigger: TACTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTG...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCAGGGGGTGTGGGGAGTaGAGCAGGAACACAACAGAC +
Preference number: 5 (lower is better)
Translates to: LIRSSALVLAQGTRKECCRGCGE*SRNTTD
Trigger: GTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TCCAGCCCTCTGAGTCTGGACACGAGGCTCAGCCATTGGTCCTGCCCTTGGCAGCACTTCAAGATCCTCTaGAGAAGGTCTTATATCAAT +
Preference number: 5 (lower is better)
Translates to: SSPLSLDTRLSHWSCPWQHFKIL*RRSYIN
Trigger: ATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTG...CTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTGTCCAGACTCAGAGGGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCGGAAGGCCTCCATTTaGGCCTTCCCCTCCCCGGAT +
Preference number: 5 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHRKASI*AFPSPD
Trigger: ATCCGGGGAGGGGAAGGCCAAAATGGAGGCCTTCCG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAATAAGGTCATCAGCATaGGTTTTGGCCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKIRSSA*VLAQGT
Trigger: TGTGCCCTGGGCCAAAACCAATGCTGATGACCTTAT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGGCCTCTGCAAATTAAGGGTGTAGCCTGCAGAAATAACAAAAGACTGCAGATATCCACCCGCAGCAAGTaGGAGGAAAGCGGCGGCAAG +
Preference number: 5 (lower is better)
Translates to: WPLQIKGVACRNNKRLQISTRSK*EESGGK
Trigger: CTTGCCGCCGCTTTCCTCCAACTTGCTGCGGGTGGA...TATCTGCAGTCTTTTGTTATTTCTGCAGGCTACACCCTTAATTTGCAGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212355.9
CDS-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCGTGTTGAAGACAGGCTaGAAGACAAAGCTGAATCGC +
Preference number: 5 (lower is better)
Translates to: WPRAQERNVALTLVRVQSVLKTG*KTKLNR
Trigger: GCGATTCAGCTTTGTCTTCAAGCCTGTCTTCAACAC...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTCACGAGGCTCAGCCATaGGTCCTGCCCTTGGCAGTA +
Preference number: 5 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVHEAQP*VLPLAV
Trigger: TACTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTG...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGGAGACCGACAGGATTaGCCATGCATTTGCATCTTG +
Preference number: 5 (lower is better)
Translates to: RLQTQCPSRLGCPDHGKLGDRQD*PCICIL
Trigger: CAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCC...CAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS TCA 90 bp TGGGGAGTTGAGCAGGAACACAACAGACTTGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTGAAGTGTGACCTGTTTAGTAAGCCA +
Preference number: 5 (lower is better)
Translates to: WGVEQEHNRLVVDVD*GDGIQVKCDLFSKP
Trigger: TGGCTTACTAAACAGGTCACACTTCACCTGAATCCCATCTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCTGCTCAACTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468996.2
CDS-3UTR CAA 90 bp ATTGTCACATTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGAGGAACACAACAGACTaGTGGTGGATGTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: IVTFDRQGNIHAPLHLFWRNTTD*WWMWTE
Trigger: CTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCT...CCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAATGTGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGCTTTGGAGGGAACACTaGATCTTCCCCCACTTTAAT +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRLWREH*IFPHFN
Trigger: ATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAAG...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTCCCTATGTTGCACTTaGGAGGGAACACTTGATCTT +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRSLCCT*EGTLDL
Trigger: AAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGGA...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATTTCTGCTGCTTTGGGTaGAAGGTACTCAGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNFCCFG*KVLSKV
Trigger: TACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAA...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCACGGAAGGCCTCCATTTaGGCCTTCCCCTCCCCGGAT +
Preference number: 5 (lower is better)
Translates to: QASLNIKRFDHPVDRLFARKASI*AFPSPD
Trigger: ATCCGGGGAGGGGAAGGCCAAAATGGAGGCCTTCCG...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AGACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTAATATCCACGCTCCCTaGCACCTCTTCTGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RLSWKYLGKETEGLHFGLNIHAP*HLFWLS
Trigger: AGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATT...AAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGAGAGATAAAGCACGTTaGGATGGCAAATCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SSVVQKPRVMFILALGVGRDKAR*DGKSQF
Trigger: GAACTGGGATTTGCCATCCAAACGTGCTTTATCTCT...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGGTGGAGAAATTGGATTaGGTTCCTTCATGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: SSVVQKPRVMFILALGVGVEKLD*VPSCLD
Trigger: GTCCAAGCATGAAGGAACCAAATCCAATTTCTCCAC...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGAGATATAAAGAATCTTaGGCCGCATCTCCTCACTGG +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRRYKES*AASPHW
Trigger: CCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTTCATCAGCATTGGTTTaGGCCCAGGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: PQVVAARSEVCIQTKVQISSALV*AQGTRK
Trigger: CTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGA...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCGGATTTGCCATGCATTaGCATCTTGCTACAGTTTGG +
Preference number: 5 (lower is better)
Translates to: WPRAQERNVALTLVRVQSGFAMH*HLATVW
Trigger: CCAAACTGTAGCAAGATGCAAATGCATGGCAAATCC...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCAATCTCAGCACTGTCTaGGTGGAATTGGTGACACTA +
Preference number: 5 (lower is better)
Translates to: WPRAQERNVALTLVRVQSNLSTV*VELVTL
Trigger: TAGTGTCACCAATTCCACCAAGACAGTGCTGAGATT...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAAATCTCAGCACTGTCTaGGTGGAATTGGTGACACTA +
Preference number: 5 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKNLSTV*VELVTL
Trigger: TAGTGTCACCAATTCCACCAAGACAGTGCTGAGATT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGTGTAATCTCAACACTTaGGGAGCCCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLCNLNT*GARGGW
Trigger: CCACCCGCCTCGGGCTCCCAAAGTGTTGAGATTACA...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS GCA 90 bp ATCTACACACAAGGATTCTCTGCCGTCCCTCTGATGTTGTGTCCTTaGTTTGACTCAATGTTGCCAGAGCTCTGCTTCCTTGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: IYTQGFSAVPLMLCP*FDSMLPELCFLVCA
Trigger: AGCACACACAAGGAAGCAGAGCTCTGGCAACATTGAGTCAAAGCAAGGACACAACATCAGAGGGACGGCAGAGAATCCTTGTGTGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CAA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCAGGAACACAACAGACTaGTGGTGGATGTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: LIRSSALVLAQGTRKECCRNTTD*WWMWTE
Trigger: CTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAGGGGGTGTGGGGAGTaGAGCAGGAACACAACAGAC +
Preference number: 5 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGRGCGE*SRNTTD
Trigger: GTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCT...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTTCTGCTGCTTTGGGTaGAAGGTACTCAGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: FWPRAQERNVALTLVRVQFCCFG*KVLSKV
Trigger: TACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAA...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAACAGTTGACAGACTTTTaGCACTTCAAGATCAGGATG +
Preference number: 5 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKQLTDF*HFKIRM
Trigger: CATCCTGATCTTGAAGTGCAAAAAGTCTGTCAACTG...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGCAGTTGACAGACTTTTaGCACTTCAAGATCAGGATG +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRQLTDF*HFKIRM
Trigger: CATCCTGATCTTGAAGTGCAAAAAGTCTGTCAACTG...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACGTCTTCTTATTCTGCATCATGGCCCAGATTATCGAGGCGTCCAGCGAGGTGCGATTTGATCACCCAGTaGACAGACTTTTTGCACTTC +
Preference number: 5 (lower is better)
Translates to: TSSYSASWPRLSRRPARCDLITQ*TDFLHF
Trigger: GAAGTGCAAAAAGTCTGTCAACTGGGTGATCAAATC...GCACCTCGCTGGACGCCTCGATAATCTGGGCCATGATGCAGAATAAGAAGACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGGAGACCAGGAAACAGTaGTATGCTGGGAATGACAGG +
Preference number: 5 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIEETRKQ*YAGNDR
Trigger: CCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTC...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGACGATCATCTTCTCATaGTCACATTTGACAGACAGG +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRTIIFS*SHLTDR
Trigger: CCTGTCTGTCAAATGTGACAATGAGAAGATGATCGT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTTCCCCATTCATCTTGGCCTaGCAGGTAGGATCCAACAGG +
Preference number: 5 (lower is better)
Translates to: TVRVSRPWKIGGEIGFGSPFILA*QVGSNR
Trigger: CCTGTTGGATCCTACCTGCAAGGCCAAGATGAATGG...GGAACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCATAAGGTCATCAGCATaGGTTTTGGCCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLIRSSA*VLAQGT
Trigger: TGTGCCCTGGGCCAAAACCAATGCTGATGACCTTAT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGGCATCTTGCTACAGTTaGGTTTTTATGAAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: SSVVQKPRVMFILALGVGASCYS*VFMKGP
Trigger: AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGC...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGGCATCTTGCTACAGTTaGGTTTTTATGAAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRASCYS*VFMKGP
Trigger: AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGC...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGGAGACCGACAGGATTaGCCATGCATTTGCATCTTG +
Preference number: 5 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLGDRQD*PCICIL
Trigger: CAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATAATCTGCCTTGGAGTTaGGGGCATTTTAACAACAGC +
Preference number: 5 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNNLPWS*GHFNNS
Trigger: GCTGTTGTTAAAATGCCCCAAACTCCAAGGCAGATT...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATCAGAGCTCTGCTTCCTaGTGTGTGCTGGCATCCATC +
Preference number: 5 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHQSSAS*CVLASI
Trigger: GATGGATGCCAGCACACACAAGGAAGCAGAGCTCTG...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCGAGCACAGACAATCTTaGCAAATCAGAAGTAGTCTT +
Preference number: 5 (lower is better)
Translates to: WPRAQERNVALTLVRVQSEHRQS*QIRSSL
Trigger: AAGACTACTTCTGATTTGCAAAGATTGTCTGTGCTC...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAACCTGTGGCAGCCCAGTaGTGCCTCTGCTGGCACAGC +
Preference number: 5 (lower is better)
Translates to: LIFPHFNINVSCYLEFGEPVAAQ*CLCWHS
Trigger: GCTGTGCCAGCAGAGGCACAACTGGGCTGCCACAGG...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTAGGGGGTGTGGGGAGTaGAGCAGGAACACAACAGAC +
Preference number: 5 (lower is better)
Translates to: RICHAFASCYSLVFMKGPRGCGE*SRNTTD
Trigger: GTCTGTTGTGTTCCTGCTCAACTCCCCACACCCCCT...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAAATCAGGATGAGATTTTaGACCACTTCAAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKIRMRF*TTSRSS
Trigger: AGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGAT...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATGATTTGATCACCCAGTaGACAGACTTTTTGCACTTC +
Preference number: 5 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNDLITQ*TDFLHF
Trigger: GAAGTGCAAAAAGTCTGTCAACTGGGTGATCAAATC...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCATTAACATCAAAAGATTaGATCACCCAGTTGACAGAC +
Preference number: 5 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPLTSKD*ITQLTD
Trigger: GTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAA...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTAATATCCACGCTCCCTaGCACCTCTTCTGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVNIHAP*HLFWLS
Trigger: AGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATT...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAATTCTCATTGTCACATTaGACAGACAGGGCAATATCC +
Preference number: 5 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKFSLSH*TDRAIS
Trigger: GGATATTGCCCTGTCTGTCAAATGTGACAATGAGAA...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAACGATCATCTTCTCATaGTCACATTTGACAGACAGG +
Preference number: 5 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKTIIFS*SHLTDR
Trigger: CCTGTCTGTCAAATGTGACAATGAGAAGATGATCGT...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATACGATCATCTTCTCATaGTCACATTTGACAGACAGG +
Preference number: 5 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNTIIFS*SHLTDR
Trigger: CCTGTCTGTCAAATGTGACAATGAGAAGATGATCGT...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTTTGTATAGCTCCATGTaGAAGGTGATGTTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: PQVVAARSEVCIQTKVQILYSSM*KVMFPW
Trigger: CCACGGAAACATCACCTTCAACATGGAGCTATACAA...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTAGAGATAAAGCACGTTaGGATGGCAAATCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIRDKAR*DGKSQF
Trigger: GAACTGGGATTTGCCATCCAAACGTGCTTTATCTCT...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp CTGGAACCTGTATCACAATGGAGTTATAGTAGACCACACCATCAAGGGCTGACCAAGAGCAGTGAGGTGTaGAAGACAGGCTTGAAGACA +
Preference number: 5 (lower is better)
Translates to: LEPVSQWSYSRPHHQGLTKSSEV*KTGLKT
Trigger: TGTCTTCAAGCCTGTCTTCAACACCTCACTGCTCTT...GGTCAGCCCTTGATGGTGTGGTCTACTATAACTCCATTGTGATACAGGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CAA 90 bp GACTCTCCTGGAAATATCTGGGAAAGGAAACGGAAGGCCTCCATTTTGGCCTTCGTGGAGAAATTGGATTaGGTTCCTTCATGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: DSPGNIWERKRKASILAFVEKLD*VPSCLD
Trigger: GTCCAAGCATGAAGGAACCAAATCCAATTTCTCCAC...GAAGGCCAAAATGGAGGCCTTCCGTTTCCTTTCCCAGATATTTCCAGGAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTCGGGGAGGTGGGGACTaGCTGCCTTCCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFRGGGD*LPSCCL
Trigger: GAGACAGCAGGAAGGCAGCAAGTCCCCACCTCCCCG...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCACCCTTTACCAACTCCTaGAGTCTGGGTAAAACTCAG +
Preference number: 5 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAPFTNS*SLGKTQ
Trigger: CTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGG...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCACTGTGGTTCCTGATTTaGGTCATTTTCAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPLWFLI*VIFNFC
Trigger: ACAGAAATTGAAAATGACCAAAATCAGGAACCACAG...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGCATCTTGCTACAGTTaGGTTTTTATGAAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKASCYS*VFMKGP
Trigger: AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGC...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGCTCCGATCACAAAGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCACCATGCATTTGCATCTaGCTACAGTTTGGTTTTTAT +
Preference number: 5 (lower is better)
Translates to: VLRSQRLQTQCPSRLGCPPCICI*LQFGFY
Trigger: ATAAAAACCAAACTGTAGCAAGATGCAAATGCATGG...TGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCTTTGTGATCGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AACCATGAGGTAGTTACAGTACAAAAAGACTGGCACGCGTGTGAGCACCCCACAGGATTTGCCATGCATTaGCATCTTGCTACAGTTTGG +
Preference number: 5 (lower is better)
Translates to: NHEVVTVQKDWHACEHPTGFAMH*HLATVW
Trigger: CCAAACTGTAGCAAGATGCAAATGCATGGCAAATCC...TGTGGGGTGCTCACACGCGTGCCAGTCTTTTTGTACTGTAACTACCTCATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS CCA 90 bp GCTCTGGACCTGCAGTGGCTAAACAGGAGCTCATCAGGGCAAAGATaGCAATCACATAATGGGAAGTCATTTTTATTTCTCCAACAGTGC +
Preference number: 5 (lower is better)
Translates to: ALDLQWLNRSSSGQR*QSHNGKSFLFLQQC
Trigger: GCACTGTTGGAGAAATAAAAATGACTTCCCATTATGTGATTGCCATCTTTGCCCTGATGAGCTCCTGTTTAGCCACTGCAGGTCCAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000417833.2
ENST00000465892.6
ENST00000525962.5
ENST00000533089.5
CDS CCA 90 bp CACTCCAGCCTGCAGTGGCTAAACAGGAGCTCATCAGGGCAAAGATaGCAATCACATAATGGGAAGTCATTTTTATTTCTCCAACAGTGC +
Preference number: 5 (lower is better)
Translates to: HSSLQWLNRSSSGQR*QSHNGKSFLFLQQC
Trigger: GCACTGTTGGAGAAATAAAAATGACTTCCCATTATGTGATTGCCATCTTTGCCCTGATGAGCTCCTGTTTAGCCACTGCAGGCTGGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGAGGAACACAACAGACTaGTGGTGGATGTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLRNTTD*WWMWTE
Trigger: CTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCT...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGATGTTTCTTGCTATCTaGAGTTCGGTGAATGAAGTA +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRMFLAI*SSVNEV
Trigger: TACTTCATTCACCGAACTCAAGATAGCAAGAAACAT...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGCACTTCAAGATCCTCTaGAGAAGGTCTTATATCAAT +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRHFKIL*RRSYIN
Trigger: ATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTG...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TCTAGTGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGCACTTCAAGATCCTCTaGAGAAGGTCTTATATCAAT +
Preference number: 5 (lower is better)
Translates to: SSVVQKPRVMFILALGVGHFKIL*RRSYIN
Trigger: ATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTG...CCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AGGCTGCAAACGCAATGCCCATCACGGTTAGGGTGTCCAGACCATGGAAAATTGATCAGGATGAGATTTTaGACCACTTCAAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: RLQTQCPSRLGCPDHGKLIRMRF*TTSRSS
Trigger: AGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGAT...CAATTTTCCATGGTCTGGACACCCTAACCGTGATGGGCATTGCGTTTGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGTGTATGAAGTTATaGGACTATAGCCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: PHRLWQQGQKCASRQRCKLCMKL*DYSHCP
Trigger: TGGACAATGGCTATAGTCCAATAACTTCATACACAA...TTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTGACAGACAGGGCAATATCCACGCTCCCTTGCACCTCTTCTGGCTCTCTGAGTTGTGTATGAAGTTATaGGACTATAGCCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: FDRQGNIHAPLHLFWLSELCMKL*DYSHCP
Trigger: TGGACAATGGCTATAGTCCAATAACTTCATACACAA...CTCAGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATTGCCCTGTCTGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTGAGACCAGGAAACAGTaGTATGCTGGGAATGACAGG +
Preference number: 5 (lower is better)
Translates to: GVCKYGKKQEADKVISIGETRKQ*YAGNDR
Trigger: CCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTC...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGAGACCAGGAAACAGTaGTATGCTGGGAATGACAGG +
Preference number: 5 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVETRKQ*YAGNDR
Trigger: CCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTCCATTCATCTTGGCCTaGCAGGTAGGATCCAACAGG +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTPFILA*QVGSNR
Trigger: CCTGTTGGATCCTACCTGCAAGGCCAAGATGAATGG...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGTTGTATAGCTCCATGTaGAAGGTGATGTTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIELYSSM*KVMFPW
Trigger: CCACGGAAACATCACCTTCAACATGGAGCTATACAA...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCGGCAAATCCCAGTTCTaGTTCAGCCTTAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLGKSQF*FSLSNR
Trigger: TCTGTTACTAAGGCTGAACAAGAACTGGGATTTGCC...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCCATTGGTCCTGCCCTaGGCAGTAGCTGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRPLVLP*AVAELS
Trigger: GCTCAGCTCAGCTACTGCCAAGGGCAGGACCAATGG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCACGAGGCTCAGCCATaGGTCCTGCCCTTGGCAGTA +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRHEAQP*VLPLAV
Trigger: TACTGCCAAGGGCAGGACCAATGGCTGAGCCTCGTG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTTCCCCCTTTACCAACTCCTaGAGTCTGGGTAAAACTCAG +
Preference number: 5 (lower is better)
Translates to: TVRVSRPWKIGGEIGFGSPFTNS*SLGKTQ
Trigger: CTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGG...GGAACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTCCTTCATCCATATCTCCCGGAAATCCATTATCACCTGACTCCAGATCTTTCATCAGCATTGGTTTaGGCCCAGGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: HLLHPYLPEIHYHLTPDLSSALV*AQGTRK
Trigger: CTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGA...AAGATCTGGAGTCAGGTGATAATGGATTTCCGGGAGATATGGATGAAGGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGTCCCTGTGGTTCCTGATTTaGGTCATTTTCAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: WPRAQERNVALTLVRVQSLWFLI*VIFNFC
Trigger: ACAGAAATTGAAAATGACCAAAATCAGGAACCACAG...GGACTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGGGAGACCGACAGGATTaGCCATGCATTTGCATCTTG +
Preference number: 5 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLGDRQD*PCICIL
Trigger: CAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCC...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGGGGGTAGAATCTATCTaGTTCTACTTATGGAATTCT +
Preference number: 5 (lower is better)
Translates to: IRPHRLWQQGQKCASRQRGVESI*FYLWNS
Trigger: AGAATTCCATAAGTAGAACAAGATAGATTCTACCCC...CCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS GCA 90 bp AGATGGCAATCACATAATGGGAAGTCATTTTTATTTCTCCAACAGTaGGTCTCGTCCAGTCACTTCAGCCTGCTCAGAGCACAGACAATC +
Preference number: 5 (lower is better)
Translates to: RWQSHNGKSFLFLQQ*VSSSHFSLLRAQTI
Trigger: GATTGTCTGTGCTCTGAGCAGGCTGAAGTGACTGGACGAGACGCACTGTTGGAGAAATAAAAATGACTTCCCATTATGTGATTGCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000417833.2
ENST00000465892.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGTGCAAATTGAGCACAGACAATCTTaGCAAATCAGAAGTAGTCTT +
Preference number: 5 (lower is better)
Translates to: PQVVAARSEVCIQTKVQIEHRQS*QIRSSL
Trigger: AAGACTACTTCTGATTTGCAAAGATTGTCTGTGCTC...AATTTGCACCTTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTAGGAACACAACAGACTaGTGGTGGATGTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTRNTTD*WWMWTE
Trigger: CTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTTCCTCCCTATGTTGCACTTaGGAGGGAACACTTGATCTT +
Preference number: 5 (lower is better)
Translates to: TVRVSRPWKIGGEIGFGSSLCCT*EGTLDL
Trigger: AAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGGA...GGAACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTCTGGGTAAAACTCAGGGCCCCAAATTATGGATGTTCTCACCTGGACAAAGCAAAATTCTTCCCTATGTaGCACTTTGGAGGGAACACT +
Preference number: 5 (lower is better)
Translates to: VWVKLRAPNYGCSHLDKAKFFPM*HFGGNT
Trigger: AGTGTTCCCTCCAAAGTGCAACATAGGGAAGAATTT...TGCTTTGTCCAGGTGAGAACATCCATAATTTGGGGCCCTGAGTTTTACCCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTTTCTGCTGCTTTGGGTaGAAGGTACTCAGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: GVCKYGKKQEADKVISIGFCCFG*KVLSKV
Trigger: TACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAA...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATTTCTGCTGCTTTGGGTaGAAGGTACTCAGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHFCCFG*KVLSKV
Trigger: TACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAA...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGATCAGGATGAGATTTTaGACCACTTCAAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: FWPRAQERNVALTLVRVQIRMRF*TTSRSS
Trigger: AGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGAT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAATTAACATCAAAAGATTaGATCACCCAGTTGACAGAC +
Preference number: 5 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKLTSKD*ITQLTD
Trigger: GTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAA...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCTTCTCATTGTCACATTaGACAGACAGGGCAATATCC +
Preference number: 5 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLFSLSH*TDRAIS
Trigger: GGATATTGCCCTGTCTGTCAAATGTGACAATGAGAA...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCACCATTCATCTTGGCCTaGCAGGTAGGATCCAACAGG +
Preference number: 5 (lower is better)
Translates to: QASLNIKRFDHPVDRLFAPFILA*QVGSNR
Trigger: CCTGTTGGATCCTACCTGCAAGGCCAAGATGAATGG...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACTTGTATAGCTCCATGTaGAAGGTGATGTTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: SDNQLETDRICHAFASCYLYSSM*KVMFPW
Trigger: CCACGGAAACATCACCTTCAACATGGAGCTATACAA...GTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCTTAACACTTGTCAGGGTGCAGAAAAAGAGGTCAGTGTaGTATAGCTCCATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: FWPRAQERNVALTLVRVQKKRSV*YSSMLK
Trigger: CTTCAACATGGAGCTATACAACACTGACCTCTTTTT...CTGCACCCTGACAAGTGTTAAGGCAACATTCCTTTCTTGTGCCCTGGGCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATGTGTTGAAGACAGGCTaGAAGACAAAGCTGAATCGC +
Preference number: 5 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHVLKTG*KTKLNR
Trigger: GCGATTCAGCTTTGTCTTCAAGCCTGTCTTCAACAC...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
CDS-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATAAGAGCAGTGAGGTGTaGAAGACAGGCTTGAAGACA +
Preference number: 5 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHKSSEV*KTGLKT
Trigger: TGTCTTCAAGCCTGTCTTCAACACCTCACTGCTCTT...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
CDS-3UTR CAA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCCAGACCATGGAAAATaGGTGGAGAAATTGGATTTG +
Preference number: 5 (lower is better)
Translates to: LIRSSALVLAQGTRKECCPDHGK*VEKLDL
Trigger: CAAATCCAATTTCTCCACCAATTTTCCATGGTCTGG...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTTCATCAGCATTGGTTTaGGCCCAGGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTSSALV*AQGTRK
Trigger: CTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGA...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAACCATGCATTTGCATCTaGCTACAGTTTGGTTTTTAT +
Preference number: 5 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKPCICI*LQFGFY
Trigger: ATAAAAACCAAACTGTAGCAAGATGCAAATGCATGG...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACATCAGACCCCACAGGTTGTGGCAGCAAGGTCAGAAGTGTGCATCCAGACAAAGGAATTCTAAGTTGTTaGGGGGAAATTCTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: TSDPTGCGSKVRSVHPDKGILSC*GEILEK
Trigger: TTTTTCCAGAATTTCCCCCAAACAACTTAGAATTCC...TTTGTCTGGATGCACACTTCTGACCTTGCTGCCACAACCTGTGGGGTCTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CAA 90 bp TGTGGTACAGAAGCCCAGGGTCATGTTTATACTAGCCCTGGGTGTGGGGTGAATGGGGTAGAATCTATCTaGTTCTACTTATGGAATTCT +
Preference number: 5 (lower is better)
Translates to: CGTEAQGHVYTSPGCGVNGVESI*FYLWNS
Trigger: AGAATTCCATAAGTAGAACAAGATAGATTCTACCCC...ATTCACCCCACACCCAGGGCTAGTATAAACATGACCCTGGGCTTCTGTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CAA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTTGGAGGGAACACTaGATCTTCCCCCACTTTAAT +
Preference number: 5 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHLWREH*IFPHFN
Trigger: ATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAAG...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTCTTTGGAGGGAACACTaGATCTTCCCCCACTTTAAT +
Preference number: 5 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVLWREH*IFPHFN
Trigger: ATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAAG...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCATCAGGATGAGATTTTaGACCACTTCAAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: LIRSSALVLAQGTRKECCIRMRF*TTSRSS
Trigger: AGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGAT...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATGGCAAATCCCAGTTCTaGTTCAGCCTTAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHGKSQF*FSLSNR
Trigger: TCTGTTACTAAGGCTGAACAAGAACTGGGATTTGCC...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTAAGAGCAGTGAGGTGTaGAAGACAGGCTTGAAGACA +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTKSSEV*KTGLKT
Trigger: TGTCTTCAAGCCTGTCTTCAACACCTCACTGCTCTT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTAGATATAAAGAATCTTaGGCCGCATCTCCTCACTGG +
Preference number: 5 (lower is better)
Translates to: GVCKYGKKQEADKVISIGRYKES*AASPHW
Trigger: CCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCT...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCATCATCAGCATTGGTTTaGGCCCAGGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: QASLNIKRFDHPVDRLFASSALV*AQGTRK
Trigger: CTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGA...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACATAAGGTCATCAGCATaGGTTTTGGCCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: YKESLAASPHWFYYLAINIRSSA*VLAQGT
Trigger: TGTGCCCTGGGCCAAAACCAATGCTGATGACCTTAT...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGGATTTGCCATGCATTaGCATCTTGCTACAGTTTGG +
Preference number: 5 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVGFAMH*HLATVW
Trigger: CCAAACTGTAGCAAGATGCAAATGCATGGCAAATCC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACGGAGACCGACAGGATTaGCCATGCATTTGCATCTTG +
Preference number: 5 (lower is better)
Translates to: YKESLAASPHWFYYLAINGDRQD*PCICIL
Trigger: CAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCC...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATAATCTCAGCACTGTCTaGGTGGAATTGGTGACACTA +
Preference number: 5 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHNLSTV*VELVTL
Trigger: TAGTGTCACCAATTCCACCAAGACAGTGCTGAGATT...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTCTGTCAAGGAGAAGTTaGCTGATGAAAACTGGACCA +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTLSRRS*LMKTGP
Trigger: TGGTCCAGTTTTCATCAGCAAACTTCTCCTTGACAG...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp GTGTGCATCCAGACAAAGGTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCATGTTTCTTGCTATCTaGAGTTCGGTGAATGAAGTA +
Preference number: 5 (lower is better)
Translates to: VCIQTKVQIRQEDRLESLMFLAI*SSVNEV
Trigger: TACTTCATTCACCGAACTCAAGATAGCAAGAAACAT...GAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCACCTTTGTCTGGATGCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCACACACCCTTCTGCTGCTTTGGGTTGAAGGTACTCAGCAAGGTAATTGAGATGTTTCTTGCTATCTaGAGTTCGGTGAATGAAGTA +
Preference number: 5 (lower is better)
Translates to: HHTPFCCFGLKVLSKVIEMFLAI*SSVNEV
Trigger: TACTTCATTCACCGAACTCAAGATAGCAAGAAACAT...CTCAATTACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAAGGGTGTGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGCAGTTGACAGACTTTTaGCACTTCAAGATCAGGATG +
Preference number: 5 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLQLTDF*HFKIRM
Trigger: CATCCTGATCTTGAAGTGCAAAAAGTCTGTCAACTG...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATCTTGCTACAGTTGATTTGATCACCCAGTaGACAGACTTTTTGCACTTC +
Preference number: 5 (lower is better)
Translates to: ITNWRPTGFAMHLHLATVDLITQ*TDFLHF
Trigger: GAAGTGCAAAAAGTCTGTCAACTGGGTGATCAAATC...AACTGTAGCAAGATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTGATTTGATCACCCAGTaGACAGACTTTTTGCACTTC +
Preference number: 5 (lower is better)
Translates to: GVCKYGKKQEADKVISIGDLITQ*TDFLHF
Trigger: GAAGTGCAAAAAGTCTGTCAACTGGGTGATCAAATC...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGGAGACCAGGAAACAGTaGTATGCTGGGAATGACAGG +
Preference number: 5 (lower is better)
Translates to: FALRHFAVVYASMGRNRKETRKQ*YAGNDR
Trigger: CCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTC...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTACGATCATCTTCTCATaGTCACATTTGACAGACAGG +
Preference number: 5 (lower is better)
Translates to: ITVRVSRPWKIGGEIGFGTIIFS*SHLTDR
Trigger: CCTGTCTGTCAAATGTGACAATGAGAAGATGATCGT...ACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCCATTCATCTTGGCCTaGCAGGTAGGATCCAACAGG +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRPFILA*QVGSNR
Trigger: CCTGTTGGATCCTACCTGCAAGGCCAAGATGAATGG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGCCAGACCATGGAAAATaGGTGGAGAAATTGGATTTG +
Preference number: 5 (lower is better)
Translates to: VVYASMGRNRKLIRSSALPDHGK*VEKLDL
Trigger: CAAATCCAATTTCTCCACCAATTTTCCATGGTCTGG...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCTTTTTCTACAGCCACGATCATCTTCTCATTGTCACATTTGACAGACAGGGCAGATATAAAGAATCTTaGGCCGCATCTCCTCACTGG +
Preference number: 5 (lower is better)
Translates to: IFFYSHDHLLIVTFDRQGRYKES*AASPHW
Trigger: CCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCT...GCCCTGTCTGTCAAATGTGACAATGAGAAGATGATCGTGGCTGTAGAAAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGTCATCAGCATTGGTTTaGGCCCAGGGCACAAGAAAG +
Preference number: 5 (lower is better)
Translates to: FALRHFAVVYASMGRNRKSSALV*AQGTRK
Trigger: CTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGA...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAATAAGGTCATCAGCATaGGTTTTGGCCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLIRSSA*VLAQGT
Trigger: TGTGCCCTGGGCCAAAACCAATGCTGATGACCTTAT...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CTGATAAGGTCATCAGCATTGGTTTTGGCCCAGGGCACAAGAAAGGAATGTTGCCCATGCATTTGCATCTaGCTACAGTTTGGTTTTTAT +
Preference number: 5 (lower is better)
Translates to: LIRSSALVLAQGTRKECCPCICI*LQFGFY
Trigger: ATAAAAACCAAACTGTAGCAAGATGCAAATGCATGG...GCAACATTCCTTTCTTGTGCCCTGGGCCAAAACCAATGCTGATGACCTTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTGGATTTGCCATGCATTaGCATCTTGCTACAGTTTGG +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTGFAMH*HLATVW
Trigger: CCAAACTGTAGCAAGATGCAAATGCATGGCAAATCC...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTAATCTGCCTTGGAGTTaGGGGCATTTTAACAACAGC +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTNLPWS*GHFNNS
Trigger: GCTGTTGTTAAAATGCCCCAAACTCCAAGGCAGATT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CAA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCATGCTTTCTGAATCTTTaGTGGGGAAGGGGTCCACTT +
Preference number: 5 (lower is better)
Translates to: QASLNIKRFDHPVDRLFACFLNL*WGRGPL
Trigger: AAGTGGACCCCTTCCCCACAAAAGATTCAGAAAGCA...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS GCA 90 bp CATTTTTATTTCTCCAACAGTGCGTCTCGTCCAGTCACTTCAGCCTaGTCAGAGCACAGACAATCTTTGCAAATCAGAAGTAGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: HFYFSNSASRPVTSA*SEHRQSLQIRSSLK
Trigger: TTTAAGACTACTTCTGATTTGCAAAGATTGTCTGTGCTCTGAGCAGGCTGAAGTGACTGGACGAGACGCACTGTTGGAGAAATAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000417833.2
ENST00000465892.6
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATCACGGTTAGGGTGTCCAGACCATGGAAAATTGGTGGAGAAATTGGATTTGGTGAGCACAGACAATCTTaGCAAATCAGAAGTAGTCTT +
Preference number: 5 (lower is better)
Translates to: ITVRVSRPWKIGGEIGFGEHRQS*QIRSSL
Trigger: AAGACTACTTCTGATTTGCAAAGATTGTCTGTGCTC...ACCAAATCCAATTTCTCCACCAATTTTCCATGGTCTGGACACCCTAACCGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTCTGTCAAGGAGAAGTTaGCTGATGAAAACTGGACCA +
Preference number: 5 (lower is better)
Translates to: RICHAFASCYSLVFMKGPLSRRS*LMKTGP
Trigger: TGGTCCAGTTTTCATCAGCAAACTTCTCCTTGACAG...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
CDS-3UTR CAA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTCTTTGGAGGGAACACTaGATCTTCCCCCACTTTAAT +
Preference number: 5 (lower is better)
Translates to: RICHAFASCYSLVFMKGPLWREH*IFPHFN
Trigger: ATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAAG...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTAAATTCTTCCCTATGTaGCACTTTGGAGGGAACACT +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTKFFPM*HFGGNT
Trigger: AGTGTTCCCTCCAAAGTGCAACATAGGGAAGAATTT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTTTGGATGGCAAATCCCAGTTCTTGTTCAGCCTTAGTAACAGATACCTCAACAAAATTCTTCCCTATGTaGCACTTTGGAGGGAACACT +
Preference number: 5 (lower is better)
Translates to: VWMANPSSCSALVTDTSTKFFPM*HFGGNT
Trigger: AGTGTTCCCTCCAAAGTGCAACATAGGGAAGAATTT...TGTTGAGGTATCTGTTACTAAGGCTGAACAAGAACTGGGATTTGCCATCCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGAGACCAGGAAACAGTaGTATGCTGGGAATGACAGG +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRETRKQ*YAGNDR
Trigger: CCTGTCATTCCCAGCATACAACTGTTTCCTGGTCTC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTAATATCCACGCTCCCTaGCACCTCTTCTGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFNIHAP*HLFWLS
Trigger: AGAGAGCCAGAAGAGGTGCAAGGGAGCGTGGATATT...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGAAAAAGAGGTCAGTGTaGTATAGCTCCATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: VVYASMGRNRKLIRSSALKKRSV*YSSMLK
Trigger: CTTCAACATGGAGCTATACAACACTGACCTCTTTTT...CAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGGTGTTGAAGACAGGCTaGAAGACAAAGCTGAATCGC +
Preference number: 5 (lower is better)
Translates to: FALRHFAVVYASMGRNRKVLKTG*KTKLNR
Trigger: GCGATTCAGCTTTGTCTTCAAGCCTGTCTTCAACAC...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACCCTTTACCAACTCCTaGAGTCTGGGTAAAACTCAG +
Preference number: 5 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLPFTNS*SLGKTQ
Trigger: CTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACAGATATAAAGAATCTTaGGCCGCATCTCCTCACTGG +
Preference number: 5 (lower is better)
Translates to: YKESLAASPHWFYYLAINRYKES*AASPHW
Trigger: CCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCT...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTAGGAACACAACAGACTaGTGGTGGATGTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFRNTTD*WWMWTE
Trigger: CTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCT...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ATTGGTGACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATATGTTTCTTGCTATCTaGAGTTCGGTGAATGAAGTA +
Preference number: 5 (lower is better)
Translates to: IGDTIQITNWRPTGFAMHMFLAI*SSVNEV
Trigger: TACTTCATTCACCGAACTCAAGATAGCAAGAAACAT...ATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTATCCCTATGTTGCACTTaGGAGGGAACACTTGATCTT +
Preference number: 5 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLSLCCT*EGTLDL
Trigger: AAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGGA...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CACCACATGGTGAAAAGCTATAGCGTATTATACAGACAATCTGCCTTGGAGTTTCAGTTGACAGACTTTTaGCACTTCAAGATCAGGATG +
Preference number: 5 (lower is better)
Translates to: HHMVKSYSVLYRQSALEFQLTDF*HFKIRM
Trigger: CATCCTGATCTTGAAGTGCAAAAAGTCTGTCAACTG...AAACTCCAAGGCAGATTGTCTGTATAATACGCTATAGCTTTTCACCATGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CAA 90 bp GGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGATAAGGTCATCAGCATTGGTTTAACATCAAAAGATTaGATCACCCAGTTGACAGAC +
Preference number: 5 (lower is better)
Translates to: GVCKYGKKQEADKVISIGLTSKD*ITQLTD
Trigger: GTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAA...ACCAATGCTGATGACCTTATCAGCTTCCTGTTTCTTCCCATACTTGCATACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GACACTATTCAGATAACCAACTGGAGACCGACAGGATTTGCCATGCATTTGCATTTGTGTATGAAGTTATaGGACTATAGCCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: DTIQITNWRPTGFAMHLHLCMKL*DYSHCP
Trigger: TGGACAATGGCTATAGTCCAATAACTTCATACACAA...ATGCAAATGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACTTCTCATTGTCACATTaGACAGACAGGGCAATATCC +
Preference number: 5 (lower is better)
Translates to: YKESLAASPHWFYYLAINFSLSH*TDRAIS
Trigger: GGATATTGCCCTGTCTGTCAAATGTGACAATGAGAA...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTACGATCATCTTCTCATaGTCACATTTGACAGACAGG +
Preference number: 5 (lower is better)
Translates to: RICHAFASCYSLVFMKGPTIIFS*SHLTDR
Trigger: CCTGTCTGTCAAATGTGACAATGAGAAGATGATCGT...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTAAAAAGAGGTCAGTGTaGTATAGCTCCATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTKKRSV*YSSMLK
Trigger: CTTCAACATGGAGCTATACAACACTGACCTCTTTTT...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGAGAGATAAAGCACGTTaGGATGGCAAATCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: FALRHFAVVYASMGRNRKRDKAR*DGKSQF
Trigger: GAACTGGGATTTGCCATCCAAACGTGCTTTATCTCT...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGGTGGAGAAATTGGATTaGGTTCCTTCATGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: FALRHFAVVYASMGRNRKVEKLD*VPSCLD
Trigger: GTCCAAGCATGAAGGAACCAAATCCAATTTCTCCAC...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAAATAAGGTCATCAGCATaGGTTTTGGCCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: LIFPHFNINVSCYLEFGEIRSSA*VLAQGT
Trigger: TGTGCCCTGGGCCAAAACCAATGCTGATGACCTTAT...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGCTGTGGTTCCTGATTTaGGTCATTTTCAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLLWFLI*VIFNFC
Trigger: ACAGAAATTGAAAATGACCAAAATCAGGAACCACAG...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCAGCATCTTGCTACAGTTaGGTTTTTATGAAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: QASLNIKRFDHPVDRLFAASCYS*VFMKGP
Trigger: AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGC...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp ACTGAAATTCACTCTGTCTTTACAAGGGAACCAAAATCCAGCCCTCTGAGTCTGCCATGCATTTGCATCTaGCTACAGTTTGGTTTTTAT +
Preference number: 5 (lower is better)
Translates to: TEIHSVFTREPKSSPLSLPCICI*LQFGFY
Trigger: ATAAAAACCAAACTGTAGCAAGATGCAAATGCATGG...CAGACTCAGAGGGCTGGATTTTGGTTCCCTTGTAAAGACAGAGTGAATTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS TCA 90 bp GGAATGAACTTTCTCTTTCATTCGTTATTTCATCCAACAAAACACTaGGTGTCTATTGTGTGGCAGGAACACAAGCTGTTCACCAACTCT +
Preference number: 5 (lower is better)
Translates to: GMNFLFHSLFHPTKH*VSIVWQEHKLFTNS
Trigger: AGAGTTGGTGAACAGCTTGTGTTCCTGCCACACAATAGACACTCAGTGTTTTGTTGGATGAAATAACGAATGAAAGAGAAAGTTCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470600.1
CDS-3UTR CAA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACGAGCACAGACAATCTTaGCAAATCAGAAGTAGTCTT +
Preference number: 5 (lower is better)
Translates to: YKESLAASPHWFYYLAINEHRQS*QIRSSL
Trigger: AAGACTACTTCTGATTTGCAAAGATTGTCTGTGCTC...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCTGTCAAGGAGAAGTTaGCTGATGAAAACTGGACCA +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRLSRRS*LMKTGP
Trigger: TGGTCCAGTTTTCATCAGCAAACTTCTCCTTGACAG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTTTCTGCTGCTTTGGGTaGAAGGTACTCAGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFFCCFG*KVLSKV
Trigger: TACCTTGCTGAGTACCTTCAACCCAAAGCAGCAGAA...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTTTGTGTATGAAGTTATaGGACTATAGCCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTLCMKL*DYSHCP
Trigger: TGGACAATGGCTATAGTCCAATAACTTCATACACAA...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACAAAAAGAGGTCAGTGTaGTATAGCTCCATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: YKESLAASPHWFYYLAINKKRSV*YSSMLK
Trigger: CTTCAACATGGAGCTATACAACACTGACCTCTTTTT...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGGCAAATCCCAGTTCTaGTTCAGCCTTAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRGKSQF*FSLSNR
Trigger: TCTGTTACTAAGGCTGAACAAGAACTGGGATTTGCC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAGAGATAAAGCACGTTaGGATGGCAAATCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRRDKAR*DGKSQF
Trigger: GAACTGGGATTTGCCATCCAAACGTGCTTTATCTCT...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
CDS-3UTR CAA 90 bp GAACACTTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGTGTTGAAGACAGGCTaGAAGACAAAGCTGAATCGC +
Preference number: 5 (lower is better)
Translates to: EHLIFPHFNINVSCYLEFVLKTG*KTKLNR
Trigger: GCGATTCAGCTTTGTCTTCAAGCCTGTCTTCAACAC...GAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAAGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CAA 90 bp TCACCCAACAAAATGTGCTCTGTTAACACAACCAGCAGTACAATCATCATTCAACCAGACCATGGAAAATaGGTGGAGAAATTGGATTTG +
Preference number: 5 (lower is better)
Translates to: SPNKMCSVNTTSSTIIIQPDHGK*VEKLDL
Trigger: CAAATCCAATTTCTCCACCAATTTTCCATGGTCTGG...TTGAATGATGATTGTACTGCTGGTTGTGTTAACAGAGCACATTTTGTTGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACCAGACCATGGAAAATaGGTGGAGAAATTGGATTTG +
Preference number: 5 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLPDHGK*VEKLDL
Trigger: CAAATCCAATTTCTCCACCAATTTTCCATGGTCTGG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GAACACTTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCCCCTTTACCAACTCCTaGAGTCTGGGTAAAACTCAG +
Preference number: 5 (lower is better)
Translates to: EHLIFPHFNINVSCYLEFPFTNS*SLGKTQ
Trigger: CTGAGTTTTACCCAGACTCAAGGAGTTGGTAAAGGG...GAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAAGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAATCTCAGCACTGTCTaGGTGGAATTGGTGACACTA +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRNLSTV*VELVTL
Trigger: TAGTGTCACCAATTCCACCAAGACAGTGCTGAGATT...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CATCTTGGTTCAGATATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTGGAATTCTAAGTTGTTaGGGGGAAATTCTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: HLGSDIKNLWPHLLTGSTGILSC*GEILEK
Trigger: TTTTTCCAGAATTTCCCCCAAACAACTTAGAATTCC...AGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATATCTGAACCAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CAA 90 bp AGGATTTGCCATGCATTTGCATCTTGCTACAGTTTGGTTTTTATGAAAGGGCCTCTTAATAGTGATTCATaGAACAGGCCTCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: RICHAFASCYSLVFMKGPLNSDS*NRPLSV
Trigger: TACAGAGAGAGGCCTGTTCAATGAATCACTATTAAG...AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGCAAATGCATGGCAAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533089.5
CDS CCA 90 bp AAGGTCTTATATCAATTGTTATATCCACCTGGAAAGCACTGTGAATaGAAGACAAAGGCAAAGTTAAGACCTACATGCCAGAAAGTTGCA +
Preference number: 5 (lower is better)
Translates to: KVLYQLLYPPGKHCE*KTKAKLRPTCQKVA
Trigger: TGCAACTTTCTGGCATGTAGGTCTTAACTTTGCCTTTGTCTTCCATTCACAGTGCTTTCCAGGTGGATATAACAATTGATATAAGACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529608.1
CDS-3UTR CAA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTCTGTCAAGGAGAAGTTaGCTGATGAAAACTGGACCA +
Preference number: 5 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSLSRRS*LMKTGP
Trigger: TGGTCCAGTTTTCATCAGCAAACTTCTCCTTGACAG...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532540.5
CDS-3UTR CAA 90 bp TATAAAGAATCTTTGGCCGCATCTCCTCACTGGTTCTACTATCTGGCTATTAACATGTTTCTTGCTATCTaGAGTTCGGTGAATGAAGTA +
Preference number: 5 (lower is better)
Translates to: YKESLAASPHWFYYLAINMFLAI*SSVNEV
Trigger: TACTTCATTCACCGAACTCAAGATAGCAAGAAACAT...GTTAATAGCCAGATAGTAGAACCAGTGAGGAGATGCGGCCAAAGATTCTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAACTTTGGAGGGAACACTaGATCTTCCCCCACTTTAAT +
Preference number: 5 (lower is better)
Translates to: LIFPHFNINVSCYLEFGELWREH*IFPHFN
Trigger: ATTAAAGTGGGGGAAGATCAAGTGTTCCCTCCAAAG...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTTCCCTATGTTGCACTTaGGAGGGAACACTTGATCTT +
Preference number: 5 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFSLCCT*EGTLDL
Trigger: AAGATCAAGTGTTCCCTCCAAAGTGCAACATAGGGA...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTAATCAGGATGAGATTTTaGACCACTTCAAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLIRMRF*TTSRSS
Trigger: AGAGGATCTTGAAGTGGTCAAAAATCTCATCCTGAT...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGGATTTGATCACCCAGTaGACAGACTTTTTGCACTTC +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRDLITQ*TDFLHF
Trigger: GAAGTGCAAAAAGTCTGTCAACTGGGTGATCAAATC...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CACCACATGGTGAAAAGCTATAGCGTATTATACAGACAATCTGCCTTGGAGTTTTTAACATCAAAAGATTaGATCACCCAGTTGACAGAC +
Preference number: 5 (lower is better)
Translates to: HHMVKSYSVLYRQSALEFLTSKD*ITQLTD
Trigger: GTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAA...AAACTCCAAGGCAGATTGTCTGTATAATACGCTATAGCTTTTCACCATGTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533089.5
CDS-3UTR CAA 90 bp CAGGCTTCCCTTAACATCAAAAGATTTGATCACCCAGTTGACAGACTTTTTGCATTGTGTATGAAGTTATaGGACTATAGCCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: QASLNIKRFDHPVDRLFALCMKL*DYSHCP
Trigger: TGGACAATGGCTATAGTCCAATAACTTCATACACAA...TGCAAAAAGTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAAGGGAAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAATTGTATAGCTCCATGTaGAAGGTGATGTTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: LIFPHFNINVSCYLEFGELYSSM*KVMFPW
Trigger: CCACGGAAACATCACCTTCAACATGGAGCTATACAA...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GAACACTTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCAAATTCTTCCCTATGTaGCACTTTGGAGGGAACACT +
Preference number: 5 (lower is better)
Translates to: EHLIFPHFNINVSCYLEFKFFPM*HFGGNT
Trigger: AGTGTTCCCTCCAAAGTGCAACATAGGGAAGAATTT...GAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAAGTGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCACTTCAAGATCCTCTaGAGAAGGTCTTATATCAAT +
Preference number: 5 (lower is better)
Translates to: FALRHFAVVYASMGRNRKHFKIL*RRSYIN
Trigger: ATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTG...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTATTAACATCAAAAGATTaGATCACCCAGTTGACAGAC +
Preference number: 5 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLLTSKD*ITQLTD
Trigger: GTCTGTCAACTGGGTGATCAAATCTTTTGATGTTAA...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GAAGGAATGTCATCTCTTATTGATTTGGTCATTGTCATAGATCTTTCACTCTCTTTCTCATTGTCACATTaGACAGACAGGGCAATATCC +
Preference number: 5 (lower is better)
Translates to: EGMSSLIDLVIVIDLSLSFSLSH*TDRAIS
Trigger: GGATATTGCCCTGTCTGTCAAATGTGACAATGAGAA...AGAGAGTGAAAGATCTATGACAATGACCAAATCAATAAGAGATGACATTCCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTGATCTTCCCCCACTTTAATATAAATGTTTCTTGCTATCTTGAGTTCGGTGAATTCTCATTGTCACATTaGACAGACAGGGCAATATCC +
Preference number: 5 (lower is better)
Translates to: LIFPHFNINVSCYLEFGEFSLSH*TDRAIS
Trigger: GGATATTGCCCTGTCTGTCAAATGTGACAATGAGAA...TTCACCGAACTCAAGATAGCAAGAAACATTTATATTAAAGTGGGGGAAGATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp GTGCAAATTAGACAGGAGGATCGCTTAGAAAGCCTCAAAGCATTTCTTGTTTTACTGTGGTTCCTGATTTaGGTCATTTTCAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: VQIRQEDRLESLKAFLVLLWFLI*VIFNFC
Trigger: ACAGAAATTGAAAATGACCAAAATCAGGAACCACAG...TAAAACAAGAAATGCTTTGAGGCTTTCTAAGCGATCCTCCTGTCTAATTTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCTGTGGTTCCTGATTTaGGTCATTTTCAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: FALRHFAVVYASMGRNRKLWFLI*VIFNFC
Trigger: ACAGAAATTGAAAATGACCAAAATCAGGAACCACAG...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp CACTCACCCTACCAAATATACTTAAGTTGCAACTCTAAAAGCATAAGGACATTTGCATCTTGCTACAGTTaGGTTTTTATGAAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: HSPYQIYLSCNSKSIRTFASCYS*VFMKGP
Trigger: AGGCCCTTTCATAAAAACCAAACTGTAGCAAGATGC...AAATGTCCTTATGCTTTTAGAGTTGCAACTTAAGTATATTTGGTAGGGTGAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp TTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGAAGCCATGCATTTGCATCTaGCTACAGTTTGGTTTTTAT +
Preference number: 5 (lower is better)
Translates to: FALRHFAVVYASMGRNRKPCICI*LQFGFY
Trigger: ATAAAAACCAAACTGTAGCAAGATGCAAATGCATGG...CTTCCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS-3UTR CAA 90 bp AAATTTGCATTAAGACATTTTGCAGTGGTGTATGCAAGTATGGGAAGAAACAGGCACTTCAAGATCCTCTaGAGAAGGTCTTATATCAAT +
Preference number: 5 (lower is better)
Translates to: KFALRHFAVVYASMGRNRHFKIL*RRSYIN
Trigger: ATTGATATAAGACCTTCTCAAGAGGATCTTGAAGTG...CCTGTTTCTTCCCATACTTGCATACACCACTGCAAAATGTCTTAATGCAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS CCA 72 bp CTCCTGCAGGGAGCTCCGGGAATCGCGCAGGGAAAGTaGCCGGGGCGCGAGAGCCGCCGACTGCCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LLQGAPGIAQGK*PGRESRRLPSF
Trigger: GAAGGAGGGCAGTCGGCGGCTCTCGCGCCCCGGCCACTTTCCCTGCGCGATTCCCGGAGCTCCCTGCAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212355.9
ENST00000417833.2
ENST00000465892.6
ENST00000533370.1
CDS CAA 90 bp CTGCCTCGGAGGCGGTGTGTCCAGCGGAGATCCACCCGCAGCAAGTaGGAGGAAAGCGGCGGCAAGTTTCCCCGCCCAGCGCTCGGCGGC +
Preference number: 6 (lower is better)
Translates to: LPRRRCVQRRSTRSK*EESGGKFPRPALGG
Trigger: GCCGCCGAGCGCTGGGCGGGGAAACTTGCCGCCGCTTTCCTCCAACTTGCTGCGGGTGGATCTCCGCTGGACACACCGCCTCCGAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000465892.6
CDS CAA 90 bp AGAGCTCGGAGGCGGTGTGTCCAGCGGAGATCCACCCGCAGCAAGTaGGAGGAAAGCGGCGGCAAGTTTCCCCGCCCAGCGCTCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RARRRCVQRRSTRSK*EESGGKFPRPALGG
Trigger: GCCGCCGAGCGCTGGGCGGGGAAACTTGCCGCCGCTTTCCTCCAACTTGCTGCGGGTGGATCTCCGCTGGACACACCGCCTCCGAGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417833.2
CDS GCA 72 bp CGCAGGGAAAGTGGCCGGGGCGCGAGAGCCGCCGACTaGCCTCCTTCACTCGCTGGGAAGAGGAAAGTGCCG +
Preference number: 6 (lower is better)
Translates to: RRESGRGARAAD*PPSLAGKRKVP
Trigger: CGGCACTTTCCTCTTCCCAGCGAGTGAAGGAGGGCAGTCGGCGGCTCTCGCGCCCCGGCCACTTTCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533370.1
CDS CCA 72 bp GGGCGCGAGAGCCGCCGACTGCCCTCCTTCACTCGCTaGGAAGAGGAAAGTGCCGCTCGGCGTCCCCGAAAC +
Preference number: 6 (lower is better)
Translates to: GRESRRLPSFTR*EEESAARRPRN
Trigger: GTTTCGGGGACGCCGAGCGGCACTTTCCTCTTCCCAGCGAGTGAAGGAGGGCAGTCGGCGGCTCTCGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212355.9
ENST00000533370.1
CDS GCA 72 bp CTACGCCATCCGGACCCGCTGGGGACTCTCACCTCCTaGAGGGAGCTCCGGGAATCGCGCAGGGAAAGTGGC +
Preference number: 6 (lower is better)
Translates to: LRHPDPLGTLTS*RELRESRRESG
Trigger: GCCACTTTCCCTGCGCGATTCCCGGAGCTCCCTGCAGGAGGTGAGAGTCCCCAGCGGGTCCGGATGGCGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000417833.2
ENST00000465892.6
CDS TCA 72 bp CATCAAGGCCTGGACAGGATGGGAGGCACTGACAGGTaGCAGTTCACACAGTGCACCAGGCTCTGGACCTGC +
Preference number: 6 (lower is better)
Translates to: HQGLDRMGGTDR*QFTQCTRLWTC
Trigger: GCAGGTCCAGAGCCTGGTGCACTGTGTGAACTGTCACCTGTCAGTGCCTCCCATCCTGTCCAGGCCTTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000465892.6
ENST00000525962.5
ENST00000533089.5
CDS TCA 72 bp GAGCAGGAACACAACAGACTTGTGGTGGATGTGGACTaGGGAGATGGGATTCAGGTGAAGTGTGACCTGTTT +
Preference number: 6 (lower is better)
Translates to: EQEHNRLVVDVD*GDGIQVKCDLF
Trigger: AAACAGGTCACACTTCACCTGAATCCCATCTCCTCAGTCCACATCCACCACAAGTCTGTTGTGTTCCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468996.2
CDS GCA 72 bp GATAGCTTCTTCCTGCACAGCCTGATGTTAAGACCATaGGCAGCTTCAGGCTCATGCGGTTCTTTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: DSFFLHSLMLRP*AASGSCGSFSL
Trigger: CAAACTGAAAGAACCGCATGAGCCTGAAGCTGCGCATGGTCTTAACATCAGGCTGTGCAGGAAGAAGCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS GCA 72 bp CAAGGATTCTCTGCCGTCCCTCTGATGTTGTGTCCTTaGTTTGACTCAATGTTGCCAGAGCTCTGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: QGFSAVPLMLCP*FDSMLPELCFL
Trigger: AAGGAAGCAGAGCTCTGGCAACATTGAGTCAAAGCAAGGACACAACATCAGAGGGACGGCAGAGAATCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS GCA 72 bp TTGTGTCCTTGCTTTGACTCAATGTTGCCAGAGCTCTaGTTCCTTGTGTGTGCTGGCATCCATCTGCAGATA +
Preference number: 6 (lower is better)
Translates to: LCPCFDSMLPEL*FLVCAGIHLQI
Trigger: TATCTGCAGATGGATGCCAGCACACACAAGGAAGCAGAGCTCTGGCAACATTGAGTCAAAGCAAGGACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370399.6
CDS GCA 72 bp TCTTTGCAAATCAGAAGTAGTCTTAAAGTCCCTCCTTaGAATTTTCAAACTGCCTCGGAGGCGGTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: SLQIRSSLKVPP*NFQTASEAVCP
Trigger: TGGACACACCGCCTCCGAGGCAGTTTGAAAATTGCAAGGAGGGACTTTAAGACTACTTCTGATTTGCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000212355.9
ENST00000465892.6
ENST00000532540.5
CDS GCA 72 bp CAGTCACTTCAGCCTGCTCAGAGCACAGACAATCTTTaGAAATCAGAAGTAGTCTTAAAGTCCCTCCTTGCA +
Preference number: 6 (lower is better)
Translates to: QSLQPAQSTDNL*KSEVVLKSLLA
Trigger: TGCAAGGAGGGACTTTAAGACTACTTCTGATTTGCAAAGATTGTCTGTGCTCTGAGCAGGCTGAAGTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000417833.2
ENST00000465892.6
ENST00000532540.5
ENST00000533089.5
CDS GCA 72 bp TCACATAATGGGAAGTCATTTTTATTTCTCCAACAGTaGGTCTCGTCCAGTCACTTCAGCCTGCTCAGAGCA +
Preference number: 6 (lower is better)
Translates to: SHNGKSFLFLQQ*VSSSHFSLLRA
Trigger: TGCTCTGAGCAGGCTGAAGTGACTGGACGAGACGCACTGTTGGAGAAATAAAAATGACTTCCCATTATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000212355.9
ENST00000370399.6
ENST00000417833.2
ENST00000465892.6
ENST00000525962.5
ENST00000532540.5
ENST00000533089.5
CDS CCA 72 bp TATCAATTGTTATATCCACCTGGAAAGCACTGTGAATaGAAGACAAAGGCAAAGTTAAGACCTACATGCCAG +
Preference number: 6 (lower is better)
Translates to: YQLLYPPGKHCE*KTKAKLRPTCQ
Trigger: CTGGCATGTAGGTCTTAACTTTGCCTTTGTCTTCCATTCACAGTGCTTTCCAGGTGGATATAACAATTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529608.1
CDS CAA 72 bp ATTCGTTATTTCATCCAACAAAACACTGAGTGTCTATaGTGTGGCAGGAACACAAGCTGTTCACCAACTCTT +
Preference number: 6 (lower is better)
Translates to: IRYFIQQNTECL*CGRNTSCSPTL
Trigger: AAGAGTTGGTGAACAGCTTGTGTTCCTGCCACACAATAGACACTCAGTGTTTTGTTGGATGAAATAACGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470600.1
CDS TCA 72 bp TTTCTCTTTCATTCGTTATTTCATCCAACAAAACACTaGGTGTCTATTGTGTGGCAGGAACACAAGCTGTTC +
Preference number: 6 (lower is better)
Translates to: FLFHSLFHPTKH*VSIVWQEHKLF
Trigger: GAACAGCTTGTGTTCCTGCCACACAATAGACACTCAGTGTTTTGTTGGATGAAATAACGAATGAAAGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470600.1