RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGFBI (Homo sapiens)

Ensembl gene IDs: ENSG00000120708

Ensembl transcript IDs: ENST00000442011.7, ENST00000503087.1, ENST00000504185.5, ENST00000504411.1, ENST00000506699.5, ENST00000507018.5, ENST00000508076.5, ENST00000508767.5, ENST00000509485.5, ENST00000509749.1, ENST00000513497.1, ENST00000514242.5, ENST00000514554.5, ENST00000515433.1, ENST00000604555.5

Found 710 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTTaGGCCCTGATGCAGCCACAGCAGCCCGAAGGGTCTCAAAGGTGT +
Preference number: 1 (lower is better)
Translates to: SGPKACTGRYLQASC*ALMQPQQPEGSQRC
Trigger: ACACCTTTGAGACCCTTCGGGCTGCTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 90 bp GAATTCAGGGGAGCCAGGAGGGTCAACCGCTCACTTCCAGAGAGATaGTTGCCGAGGCCGGCTTGTCTGAAAAGGTCAATGGCTGTGGAC +
Preference number: 1 (lower is better)
Translates to: EFRGARRVNRSLPER*LPRPACLKRSMAVD
Trigger: GTCCACAGCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGGTTGACCCTCCTGGCTCCCCTGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 90 bp GATGGTGGAGATGACCTTATCGATGAGGTGCACCACCCCGTTGGTTaGATGGTGGTCGGCTTTCAGCAGCCGGGCACAGTTCACAGTTAC +
Preference number: 1 (lower is better)
Translates to: DGGDDLIDEVHHPVG*MVVGFQQPGTVHSY
Trigger: GTAACTGTGAACTGTGCCCGGCTGCTGAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAAGGTCATCTCCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 90 bp TGCTGGATGTTGTTGGTGATGGTGGAGATGACCTTATCGATGAGGTaGACCACCCCGTTGGTTGCATGGTGGTCGGCTTTCAGCAGCCGG +
Preference number: 1 (lower is better)
Translates to: CWMLLVMVEMTLSMR*TTPLVAWWSAFSSR
Trigger: CCGGCTGCTGAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAAGGTCATCTCCACCATCACCAACAACATCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 90 bp GGGATCTTCTCGAAGGCCTCATTGGTCGGGGCCAAAAGCGTGTACTaGCCGTTACCTTCAAGCATCGTGTTGAGCCCTGATGCAGCCACA +
Preference number: 1 (lower is better)
Translates to: GIFSKASLVGAKSVY*PLPSSIVLSPDAAT
Trigger: TGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAAGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 90 bp AGGCTTCATTTGTGGGAGCAAAGACTGTGTAGACTCCTTCCCGGTTaGGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAGCTACCAGCA +
Preference number: 1 (lower is better)
Translates to: RLHLWEQRLCRLLPG*GSPSVLQTGWQLPA
Trigger: TGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTACACAGTCTTTGCTCCCACAAATGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR CCA 90 bp GAGATGACCTTATCGATGAGGTGCACCACCCCGTTGGTTGCATGGTaGTCGGCTTTCAGCAGCCGGGCACAGTTCACAGTTACAATCCCA +
Preference number: 1 (lower is better)
Translates to: EMTLSMRCTTPLVAW*SAFSSRAQFTVTIP
Trigger: TGGGATTGTAACTGTGAACTGTGCCCGGCTGCTGAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAAGGTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 90 bp GTGGAGATGACCTTATCGATGAGGTGCACCACCCCGTTGGTTGCATaGTGGTCGGCTTTCAGCAGCCGGGCACAGTTCACAGTTACAATC +
Preference number: 1 (lower is better)
Translates to: VEMTLSMRCTTPLVA*WSAFSSRAQFTVTI
Trigger: GATTGTAACTGTGAACTGTGCCCGGCTGCTGAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAAGGTCATCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 90 bp GGTCTCTACAGACAGCCCCGCAACGATGGCTTCAGCACACATAGCTaGCTTCAAGATGTGGTTGTTCAGCAGGTCTCTCAGGGCTTCTGG +
Preference number: 1 (lower is better)
Translates to: GLYRQPRNDGFSTHS*LQDVVVQQVSQGFW
Trigger: CCAGAAGCCCTGAGAGACCTGCTGAACAACCACATCTTGAAGTCAGCTATGTGTGCTGAAGCCATCGTTGCGGGGCTGTCTGTAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 90 bp AAAGACTGTGTAGACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTaGAGACTGGATGGCAGCTACCAGCATGCTAAAGCGATTGTCTCC +
Preference number: 1 (lower is better)
Translates to: KDCVDSFPVEGLRQS*RLDGSYQHAKAIVS
Trigger: GGAGACAATCGCTTTAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTACACAGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 90 bp AAAGACTGTGTAGACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTaGAGACTGGATGGCAGCTACCAGCATGCTTGGTTTTCATGCCCT +
Preference number: 1 (lower is better)
Translates to: KDCVDSFPVEGLRQS*RLDGSYQHAWFSCP
Trigger: AGGGCATGAAAACCAAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTACACAGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
3UTR TCA 90 bp TCAACCGCTCACTTCCAGAGAGATGATTGCCGAGGCCGGCTTGTCTaGAAAGGTCAATGGCTGTGGACACATCAGACTCTGCAGCCAATT +
Preference number: 1 (lower is better)
Translates to: STAHFQRDDCRGRLV*KGQWLWTHQTLQPI
Trigger: AATTGGCTGCAGAGTCTGATGTGTCCACAGCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 90 bp GTCGCACAGACCTCTGGGAAGCCCTGGAAAACGCTGATGCTTGTTTaGAGATCTCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTTCCT +
Preference number: 1 (lower is better)
Translates to: VAQTSGKPWKTLMLV*RSQAQSLQVHPLFP
Trigger: AGGAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGTTTTCCAGGGCTTCCCAGAGGTCTGTGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 90 bp GCAGCCCGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGATCTGCTaGATGTTGTTGGTGATGGTGGAGATGACCTTATCGATGAGGTGC +
Preference number: 1 (lower is better)
Translates to: AARRVSKVSSISMIC*MLLVMVEMTLSMRC
Trigger: GCACCTCATCGATAAGGTCATCTCCACCATCACCAACAACATCCAGCAGATCATTGAGATCGAGGACACCTTTGAGACCCTTCGGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 90 bp ACCAGGGCCCCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTaGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAGAGT +
Preference number: 1 (lower is better)
Translates to: TRAPMPPLTRISSPM*YFRMLASSLASPKS
Trigger: ACTCTTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGGGCCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 90 bp ACAGCAGCCCGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGATCTaGTGGATGTTGTTGGTGATGGTGGAGATGACCTTATCGATGAGG +
Preference number: 1 (lower is better)
Translates to: TAARRVSKVSSISMI*WMLLVMVEMTLSMR
Trigger: CCTCATCGATAAGGTCATCTCCACCATCACCAACAACATCCAGCAGATCATTGAGATCGAGGACACCTTTGAGACCCTTCGGGCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 90 bp AGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTTCAAGCTAATGCTTCATCCTCTCTA +
Preference number: 1 (lower is better)
Translates to: SLCGNLREIGGELPW*IPPVVLQANASSSL
Trigger: TAGAGAGGATGAAGCATTAGCTTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 90 bp AGAGTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCTaGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATGGGCA +
Preference number: 1 (lower is better)
Translates to: RVSRVCPWYRYLEAS*SLIMWFRSKFLVWA
Trigger: TGCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR CCA 90 bp TGTCCATGGTACAGATACTTAGAGGCCAGCTGGTCTTTAATTATGTaGTTCCGAAGCAAATTCCTTGTATGGGCATCAATTGGAGGGGTT +
Preference number: 1 (lower is better)
Translates to: CPWYRYLEASWSLIM*FRSKFLVWASIGGV
Trigger: AACCCCTCCAATTGATGCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCTAAGTATCTGTACCATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR CCA 90 bp GCCAGCTGGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTTCCATCTTTGAATACAGAATTCAGG +
Preference number: 1 (lower is better)
Translates to: ASWSLIMWFRSKFLV*ASIGGVPSLNTEFR
Trigger: CCTGAATTCTGTATTCAAAGATGGAACCCCTCCAATTGATGCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 90 bp CAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTaGTACTTGGTTTTGAAAACATTCAAACAGTCTCTGTGGAAATCT +
Preference number: 1 (lower is better)
Translates to: QGSHLIMVRPMYIKV*YLVLKTFKQSLWKS
Trigger: AGATTTCCACAGAGACTGTTTGAATGTTTTCAAAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR CCA 90 bp TTAATTCCTGAATTCAAGAAGGACTTATTCCTTCACAATACAGGTTaGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAGAAAAAGAGA +
Preference number: 1 (lower is better)
Translates to: LIPEFKKDLFLHNTG*IIVWFILKGLQKKR
Trigger: TCTCTTTTTCTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATTGTGAAGGAATAAGTCCTTCTTGAATTCAGGAATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604555.5
3UTR-3UTR CCA 90 bp CATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGGCGGAGAGCTGCCGTaGTGCATTCCTCCTGTAGTG +
Preference number: 2 (lower is better)
Translates to: HREQGPVPPPLVVGRDAAGGELP*CIPPVV
Trigger: CACTACAGGAGGAATGCACCACGGCAGCTCTCCGCC...AGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp GGGGTCAGCACCCGGTCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGACCCCGTTGGTTGCATaGTGGTCGGCTTTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: GVSTRSIVNRVPYLPLLSTPLVA*WSAFSS
Trigger: GCTGCTGAAAGCCGACCACCATGCAACCAACGGGGT...CGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGACCGGGTGCTGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CAA 90 bp GTCAGCACCCGGTCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTaGTCGTGGGCCGCGATGCAGCTGTTCTCAATGCAGAGGCTATTA +
Preference number: 2 (lower is better)
Translates to: VSTRSIVNRVPYLPL*SWAAMQLFSMQRLL
Trigger: TAATAGCCTCTGCATTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGACCGGGTGCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR CAA 90 bp GTCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTaGAGCCCTGATGCAGCCACAGCAGCCCGAAGGGTCTCAAAGGTG +
Preference number: 2 (lower is better)
Translates to: VGAKSVYWPLPSSIV*SPDAATAARRVSKV
Trigger: CACCTTTGAGACCCTTCGGGCTGCTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR TCA 90 bp CCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGGTGCACAAAGAGGGAGTaGTTCCAGGCTCCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: PWHLPRVCSVLLVAGLGRCTKRE*FQAPAL
Trigger: GAGAGCTGGAGCCTGGAATCACTCCCTCTTTGTGCA...CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509485.5
3UTR-3UTR GCA 90 bp CCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGGGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTT +
Preference number: 2 (lower is better)
Translates to: PWHLPRVCSVLLVAGLGRGELPW*IPPVVL
Trigger: AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC...CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp CCTGATGCAGCCACAGCAGCCCGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGCCGTTGGTTGCATGGTaGTCGGCTTTCAGCAGCCGG +
Preference number: 2 (lower is better)
Translates to: PDAATAARRVSKVSSISMPLVAW*SAFSSR
Trigger: CCGGCTGCTGAAAGCCGACCACCATGCAACCAACGG...CATTGAGATCGAGGACACCTTTGAGACCCTTCGGGCTGCTGTGGCTGCATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp CTCGAAGGCCTCATTGGTCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGGGTGCACCACCCCGTTaGTTGCATGGTGGTCGGCTT +
Preference number: 2 (lower is better)
Translates to: LEGLIGRGQKRVLAVTFKGAPPR*LHGGRL
Trigger: AAGCCGACCACCATGCAACCAACGGGGTGGTGCACC...CTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCCTTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR TCA 90 bp TCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGCTTCAAGCATCGTGTTaGGCCCTGATGCAGCCACAG +
Preference number: 2 (lower is better)
Translates to: SLASPKSLLRSLGGRARKLQASC*ALMQPQ
Trigger: CTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAG...CTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR GCA 90 bp TCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGAAATTGGCGGAGAGCTaGCGTGGTGCATTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLASPKSLLRSLGGRARKKLAES*RGAFLL
Trigger: CAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTT...CTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR GCA 90 bp CCTGATGCAGCCACAGCAGCCCGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGCAGTCAGGACTCGCCTaGCCACCATATGGTAGCGGA +
Preference number: 2 (lower is better)
Translates to: PDAATAARRVSKVSSISMQSGLA*PPYGSG
Trigger: TCCGCTACCATATGGTGGGCAGGCGAGTCCTGACTG...CATTGAGATCGAGGACACCTTTGAGACCCTTCGGGCTGCTGTGGCTGCATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR GCA 90 bp CCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGGACCTTATCGATGAGGTaGACCACCCCGTTGGTTGCA +
Preference number: 2 (lower is better)
Translates to: PWHLPRVCSVLLVAGLGRTLSMR*TTPLVA
Trigger: TGCAACCAACGGGGTGGTGCACCTCATCGATAAGGT...CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp CAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGAGGCTGCAGAACATTGGCTCCCCCTCTTGTCGTaGGCCGCGATGCAGCTGTTC +
Preference number: 2 (lower is better)
Translates to: QVHPLFPEVCWLEAAEHWLPLLS*AAMQLF
Trigger: GAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAG...CCAATGTTCTGCAGCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CAA 90 bp CCGTTGGTGGCTAGGATGTCTTTATTGGAGATGATCGCCTTCCCGTaGATAGTGAGCATGTCCCCGCTGCAGCCCACCTCCAGTGTCGTG +
Preference number: 2 (lower is better)
Translates to: PLVARMSLLEMIAFP*IVSMSPLQPTSSVV
Trigger: CACGACACTGGAGGTGGGCTGCAGCGGGGACATGCTCACTATCAACGGGAAGGCGATCATCTCCAATAAAGACATCCTAGCCACCAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp GACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAGCTACAAATCTGAGAGAAATTaGCGGAGAGCTGCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: DSFPVEGLRQSCRLDGSYKSERN*RRAAVV
Trigger: CACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTT...GTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp CCAGGAGGGTCAACCGCTCACTTCCAGAGAGATGATTGCCGAGGCCGGCTTGTCGGATCACCCCGTTGGTaGCTAGGATGTCTTTATTGG +
Preference number: 2 (lower is better)
Translates to: PGGSTAHFQRDDCRGRLVGSPRW*LGCLYW
Trigger: CCAATAAAGACATCCTAGCCACCAACGGGGTGATCC...GACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGGTTGACCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CAA 90 bp GAGGGTCAACCGCTCACTTCCAGAGAGATGATTGCCGAGGCCGGCTaGTCTGAAAAGGTCAATGGCTGTGGACACATCAGACTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: EGQPLTSREMIAEAG*SEKVNGCGHIRLCS
Trigger: GCTGCAGAGTCTGATGTGTCCACAGCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGGTTGACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR TCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGCATCGTGTTGAGCCCTaGTGCAGCCACAGCAGCCCG +
Preference number: 2 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVHRVEP*CSHSSP
Trigger: CGGGCTGCTGTGGCTGCATCAGGGCTCAACACGATG...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp GGCCCCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTGGTATTTCAGGATTCTGCTCCGTTCTCTTaGTGGCAGGGCTCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: GPDASANQDFITNVVFQDSAPFS*WQGSEG
Trigger: GCCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGA...ATCCTGAAATACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR TCA 90 bp AGTCTGCAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGAGGCTGCAGAAGGTCCTCTCTGGAAGTaGATGTCAGGCAGTGACATC +
Preference number: 2 (lower is better)
Translates to: SLQVHPLFPEVCWLEAAEGPLWK*MSGSDI
Trigger: GATGTCACTGCCTGACATTCACTTCCAGAGAGGACC...TTCTGCAGCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTGCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR GCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGCACCACCCCGTTGGTTaGATGGTGGTCGGCTTTCAG +
Preference number: 2 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVHHPVG*MVVGFQ
Trigger: CTGAAAGCCGACCACCATGCAACCAACGGGGTGGTG...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CAA 90 bp AGGATACGGTTCAAAGTCTCACTAGGGATCTTCTCGAAGGCCTCATaGGTCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATC +
Preference number: 2 (lower is better)
Translates to: RIRFKVSLGIFSKAS*VGAKSVYWPLPSSI
Trigger: GATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAAGATCCCTAGTGAGACTTTGAACCGTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CAA 90 bp AGTCGCACAGACCTCTGGGAAGCCCTGGAAAACGCTGATGCTTGTTaGAAGATCTCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: SRTDLWEALENADAC*KISSAESASSSPLS
Trigger: GGAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGTTTTCCAGGGCTTCCCAGAGGTCTGTGCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR TCA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACGTGAATGTCAGGCAGTaGCATCCAAGTTTCTGCATG +
Preference number: 2 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHVNVRQ*HPSFCM
Trigger: CATGCAGAAACTTGGATGTCACTGCCTGACATTCAC...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp AGTCTGCAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGAGGCTGCAGAAGCCAAAAGCGTGTACTaGCCGTTACCTTCAAGCATC +
Preference number: 2 (lower is better)
Translates to: SLQVHPLFPEVCWLEAAEAKSVY*PLPSSI
Trigger: GATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGC...TTCTGCAGCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTGCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CAA 90 bp CGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGATCTGCTGGATGTaGTTGGTGATGGTGGAGATGACCTTATCGATGAGGTGCACCACC +
Preference number: 2 (lower is better)
Translates to: RRVSKVSSISMICWM*LVMVEMTLSMRCTT
Trigger: GGTGGTGCACCTCATCGATAAGGTCATCTCCACCATCACCAACAACATCCAGCAGATCATTGAGATCGAGGACACCTTTGAGACCCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR GCA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGAAAATTGGCGGAGAGCTaGCGTGGTGCATTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGKLAES*RGAFLL
Trigger: CAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTT...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR GCA 90 bp AGCAGGTCTCTCAGGGCTTCTGGGTCGCCCAGGATACGGTTCAAAGTCTCACTAATCCAAGTTTCTGCATaGAGTGGGTTAACAGCCATG +
Preference number: 2 (lower is better)
Translates to: SRSLRASGSPRIRFKVSLIQVSA*SGLTAM
Trigger: CATGGCTGTTAACCCACTGCATGCAGAAACTTGGAT...TAGTGAGACTTTGAACCGTATCCTGGGCGACCCAGAAGCCCTGAGAGACCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR GCA 90 bp AGCAAAGACTGTGTAGACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACATGCTTGGTTTTCATaGCCTCCGTATGCACAAAGA +
Preference number: 2 (lower is better)
Translates to: SKDCVDSFPVEGLRQSCRHAWFS*PPYAQR
Trigger: TCTTTGTGCATACGGAGGGCATGAAAACCAAGCATG...TCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTACACAGTCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
3UTR-3UTR CCA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGAGGCGGAGAGCTGCCGTaGTGCATTCCTCCTGTAGTG +
Preference number: 2 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGGGELP*CIPPVV
Trigger: CACTACAGGAGGAATGCACCACGGCAGCTCTCCGCC...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTGGCGGAGAGCTGCCGTaGTGCATTCCTCCTGTAGTG +
Preference number: 2 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLGGELP*CIPPVV
Trigger: CACTACAGGAGGAATGCACCACGGCAGCTCTCCGCC...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR TCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGGTCTCTGTGGAAATCTaGGAGAAATTGGCGGAGAGC +
Preference number: 2 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVVSVEI*EKLAES
Trigger: GCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGAC...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR TCA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGAGTGAATGTCAGGCAGTaGCATCCAAGTTTCTGCATG +
Preference number: 2 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRVNVRQ*HPSFCM
Trigger: CATGCAGAAACTTGGATGTCACTGCCTGACATTCAC...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR TCA 90 bp GGCCCCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTGGTATTTCAGGATGTGAATGTCAGGCAGTaGCATCCAAGTTTCTGCATG +
Preference number: 2 (lower is better)
Translates to: GPDASANQDFITNVVFQDVNVRQ*HPSFCM
Trigger: CATGCAGAAACTTGGATGTCACTGCCTGACATTCAC...ATCCTGAAATACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTGGCGGAGAGCTGCCGTaGTGCATTCCTCCTGTAGTG +
Preference number: 2 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFGGELP*CIPPVV
Trigger: CACTACAGGAGGAATGCACCACGGCAGCTCTCCGCC...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp AGCAAAGACTGTGTAGACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGAAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTT +
Preference number: 2 (lower is better)
Translates to: SKDCVDSFPVEGLRQSCRSKFLV*ASIGGV
Trigger: AACCCCTCCAATTGATGCCCATACAAGGAATTTGCT...TCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTACACAGTCTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR-3UTR CCA 90 bp ATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAGAGGTCCTGCAGACTGGATaGCAGCTACCAGCATGCTTG +
Preference number: 2 (lower is better)
Translates to: ITNVVFQDVGKFLGISQEVLQTG*QLPACL
Trigger: CAAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGAC...CTCTTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509485.5
3UTR-3UTR TCA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGAGTCTCTGTGGAAATCTaGGAGAAATTGGCGGAGAGC +
Preference number: 2 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGVSVEI*EKLAES
Trigger: GCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGAC...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR GCA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCCCTCCTCCCCCACATaGACAAGGCTCACATCTCAT +
Preference number: 2 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLPSSPT*TRLTSH
Trigger: ATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAGGG...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR GCA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGAATCCAAGTTTCTGCATaGAGTGGGTTAACAGCCATG +
Preference number: 2 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRIQVSA*SGLTAM
Trigger: CATGGCTGTTAACCCACTGCATGCAGAAACTTGGAT...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR GCA 90 bp ACCAGGATTTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATGTCGTGGGCCGCGATaGAGCTGTTCTCAATGCAGA +
Preference number: 2 (lower is better)
Translates to: TRISSPMWYFRMLASSLACRGPR*SCSQCR
Trigger: TCTGCATTGAGAACAGCTGCATCGCGGCCCACGACA...TGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAAATCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACGGCGGAGAGCTGCCGTaGTGCATTCCTCCTGTAGTG +
Preference number: 2 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNGGELP*CIPPVV
Trigger: CACTACAGGAGGAATGCACCACGGCAGCTCTCCGCC...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp TTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAGTCAGTCCTGCAGACTaGATGGCAGCTACCAGCATG +
Preference number: 2 (lower is better)
Translates to: FITNVVFQDVGKFLGISQVSPAD*MAATSM
Trigger: CATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGAC...TTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR-3UTR TCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTGGTCCTCTCTGGAAGTaGATGTCAGGCAGTGACATC +
Preference number: 2 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLGPLWK*MSGSDI
Trigger: GATGTCACTGCCTGACATTCACTTCCAGAGAGGACC...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR GCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTT +
Preference number: 2 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFGELPW*IPPVVL
Trigger: AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp GCTGATGCTTGTTTGAAGATCTCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTGCTGACTTCAAGATGTaGTTGTTCAGCAGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: ADACLKISSAESASSSPLADFKM*LFSRSL
Trigger: GAGAGACCTGCTGAACAACCACATCTTGAAGTCAGC...AAGAGGGGATGAACTTGCAGACTCTGCGCTTGAGATCTTCAAACAAGCATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp GGCCCCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTGGTATTTCAGGATTGTATGGGCATCAATTaGAGGGGTTCCATCTTTGAA +
Preference number: 2 (lower is better)
Translates to: GPDASANQDFITNVVFQDCMGIN*RGSIFE
Trigger: TTCAAAGATGGAACCCCTCCAATTGATGCCCATACA...ATCCTGAAATACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR GCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTT +
Preference number: 2 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNGELPW*IPPVVL
Trigger: AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGAAATCTGAGAGAAATTaGCGGAGAGCTGCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWKSERN*RRAAVV
Trigger: CACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTT...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCAAATCTGAGAGAAATTaGCGGAGAGCTGCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLKSERN*RRAAVV
Trigger: CACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTT...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGATCTCAATGATCTGCTaGATGTTGTTGGTGATGGTG +
Preference number: 2 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVISMIC*MLLVMV
Trigger: CACCATCACCAACAACATCCAGCAGATCATTGAGAT...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR TCA 90 bp TTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAATGGCTGAGTCTGGGATaGGTAGCTCATCAATGTAGT +
Preference number: 2 (lower is better)
Translates to: FITNVVFQDVGKFLGISQWLSLG*VAHQCS
Trigger: ACTACATTGATGAGCTACTCATCCCAGACTCAGCCA...TTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGATTACAAACACACCATaGCTCTGTCACAATAGGGAA +
Preference number: 2 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVITNTP*LCHNRE
Trigger: TTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAAT...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR GCA 90 bp ACATCAGACTCTGCAGCCAATTCAAATAGTGTCTTGGCTGAGTCTGGGATGAGTCCATTTCTCCAGCTGTaGAAGGGCTTTACAAAAACT +
Preference number: 2 (lower is better)
Translates to: TSDSAANSNSVLAESGMSPFLQL*KGFTKT
Trigger: AGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGG...ACTCATCCCAGACTCAGCCAAGACACTATTTGAATTGGCTGCAGAGTCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCTGGATGTTGGAATTCTaGTACATAGAGGTGAGGGTC +
Preference number: 2 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLWMLEF*YIEVRV
Trigger: GACCCTCACCTCTATGTACCAGAATTCCAACATCCA...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CCA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATAAAATCTGAGAGAAATTaGCGGAGAGCTGCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYIKSERN*RRAAVV
Trigger: CACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTT...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTCCTTTTCCAGGGACTTaGCATAGGCAGTCAATTCCA +
Preference number: 2 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCPFPGT*HRQSIP
Trigger: TGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGG...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR GCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACCACATCTCATTATGGTaGGGCCCATGTACATTAAAG +
Preference number: 2 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNHISLW*GPCTLK
Trigger: CTTTAATGTACATGGGCCGCACCATAATGAGATGTG...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCTCACATCTCATTATaGTGCGGCCCATGTACATTA +
Preference number: 2 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCAHISL*CGPCTL
Trigger: TAATGTACATGGGCCGCACCATAATGAGATGTGAGC...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACAGTCAATTCCACATTTaGGATAGGTCCTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNSQFHI*DRSSLE
Trigger: TTCCAGAGAGGACCTATCCCAAATGTGGAATTGACT...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CCA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATAAGTCAATTCCACATTTaGGATAGGTCCTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYISQFHI*DRSSLE
Trigger: TTCCAGAGAGGACCTATCCCAAATGTGGAATTGACT...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
3UTR-3UTR CAA 90 bp GGGGTCAGCACCCGGTCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTTCTCGAAGGCCTCATaGGTCGGGGCCAAAAGCGTG +
Preference number: 3 (lower is better)
Translates to: GVSTRSIVNRVPYLPLLSFSKAS*VGAKSV
Trigger: CACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAA...CGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGACCGGGTGCTGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp TCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGGCACCACCCCGTTGGTaGCATGGTGGTCGGCTTTCA +
Preference number: 3 (lower is better)
Translates to: SLASPKSLLRSLGGRARKAPPRW*HGGRLS
Trigger: TGAAAGCCGACCACCATGCAACCAACGGGGTGGTGC...CTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp CCTGATGCAGCCACAGCAGCCCGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGAGGTGCACCACCCCGTaGGTTGCATGGTGGTCGGCT +
Preference number: 3 (lower is better)
Translates to: PDAATAARRVSKVSSISMRCTTP*VAWWSA
Trigger: AGCCGACCACCATGCAACCAACGGGGTGGTGCACCT...CATTGAGATCGAGGACACCTTTGAGACCCTTCGGGCTGCTGTGGCTGCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp CCCGCTGCAGCCCACCTCCAGTGTCGTGCCCTCCAGGGTCTCTACAGACAGCCCTGGTGGATCTGGATGTaGGAATTCTGGTACATAGAG +
Preference number: 3 (lower is better)
Translates to: PAAAHLQCRALQGLYRQPWWIWM*EFWYIE
Trigger: CTCTATGTACCAGAATTCCAACATCCAGATCCACCA...GGGCTGTCTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGGGCTGCAGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 72 bp GATGACCTTATCGATGAGGTGCACCACCCCGTTGGTTaGATGGTGGTCGGCTTTCAGCAGCCGGGCACAGTT +
Preference number: 3 (lower is better)
Translates to: DDLIDEVHHPVG*MVVGFQQPGTV
Trigger: AACTGTGCCCGGCTGCTGAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAAGGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 72 bp GTAGACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTaGAGACTGGATGGCAGCTACCAGCATGCTAAAGCG +
Preference number: 3 (lower is better)
Translates to: VDSFPVEGLRQS*RLDGSYQHAKA
Trigger: CGCTTTAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 72 bp ACCTTATCGATGAGGTGCACCACCCCGTTGGTTGCATaGTGGTCGGCTTTCAGCAGCCGGGCACAGTTCACA +
Preference number: 3 (lower is better)
Translates to: TLSMRCTTPLVA*WSAFSSRAQFT
Trigger: TGTGAACTGTGCCCGGCTGCTGAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 72 bp CCTTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTaGATGGCAGCTACCAGCATGCTTGGTTTTCATGCC +
Preference number: 3 (lower is better)
Translates to: PSRLRVSVSPAD*MAATSMLGFHA
Trigger: GGCATGAAAACCAAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
3UTR TCA 72 bp GTACTGGCCGTTACCTTCAAGCATCGTGTTGAGCCCTaGTGCAGCCACAGCAGCCCGAAGGGTCTCAAAGGT +
Preference number: 3 (lower is better)
Translates to: VLAVTFKHRVEP*CSHSSPKGLKG
Trigger: ACCTTTGAGACCCTTCGGGCTGCTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 72 bp AAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTTaGGCCCTGATGCAGCCACAGCAGCCCGAAGGGTCT +
Preference number: 3 (lower is better)
Translates to: KACTGRYLQASC*ALMQPQQPEGS
Trigger: AGACCCTTCGGGCTGCTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 72 bp GGAGCCAGGAGGGTCAACCGCTCACTTCCAGAGAGATaGTTGCCGAGGCCGGCTTGTCTGAAAAGGTCAATG +
Preference number: 3 (lower is better)
Translates to: GARRVNRSLPER*LPRPACLKRSM
Trigger: CATTGACCTTTTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGGTTGACCCTCCTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 72 bp TTGTGGGAGCAAAGACTGTGTAGACTCCTTCCCGGTTaGGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAG +
Preference number: 3 (lower is better)
Translates to: LWEQRLCRLLPG*GSPSVLQTGWQ
Trigger: CTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTACACAGTCTTTGCTCCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR GCA 72 bp GGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATaGAGCTGTTCTCAATGCAGAGGCTATTACGATAAA +
Preference number: 3 (lower is better)
Translates to: GSRTSPSCRGPR*SCSQCRGYYDK
Trigger: TTTATCGTAATAGCCTCTGCATTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR GCA 72 bp GTAGACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTaGAGACTGGATGGCAGCTACCAGCATGCTTGGTTT +
Preference number: 3 (lower is better)
Translates to: VDSFPVEGLRQS*RLDGSYQHAWF
Trigger: AAACCAAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509485.5
3UTR CCA 72 bp TTATCGATGAGGTGCACCACCCCGTTGGTTGCATGGTaGTCGGCTTTCAGCAGCCGGGCACAGTTCACAGTT +
Preference number: 3 (lower is better)
Translates to: LSMRCTTPLVAW*SAFSSRAQFTV
Trigger: AACTGTGAACTGTGCCCGGCTGCTGAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 72 bp CCTTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTaGATGGCAGCTACCAGCATGCTAAAGCGATTGTCT +
Preference number: 3 (lower is better)
Translates to: PSRLRVSVSPAD*MAATSMLKRLS
Trigger: AGACAATCGCTTTAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 72 bp TTCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTaGTGGCAGGGCTCGGAAGGCTTCATTTGTGGGAGC +
Preference number: 3 (lower is better)
Translates to: FLGISQESAPFS*WQGSEGFICGS
Trigger: GCTCCCACAAATGAAGCCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR-3UTR CAA 90 bp CTCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGATTGCCGAGGCCGGCTaGTCTGAAAAGGTCAATGGC +
Preference number: 3 (lower is better)
Translates to: LKRRVCKFIPSFLRSVGWIAEAG*SEKVNG
Trigger: GCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAAT...CCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp AAGTTCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGCAGCTACCAGCATGCTaGGTTTTCATGCCCTCCGTA +
Preference number: 3 (lower is better)
Translates to: KFLGISQESAPFSWWQGSQLPAC*VFMPSV
Trigger: TACGGAGGGCATGAAAACCAAGCATGCTGGTAGCTG...CGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
3UTR CCA 72 bp TCGAAGGCCTCATTGGTCGGGGCCAAAAGCGTGTACTaGCCGTTACCTTCAAGCATCGTGTTGAGCCCTGAT +
Preference number: 3 (lower is better)
Translates to: SKASLVGAKSVY*PLPSSIVLSPD
Trigger: ATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCCTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 72 bp CTGTTGGCTGGAGGCTGCAGAACATTGGTGATGACATaGACCACGCCATTTGTGGCCATGATGTCAGGCTCG +
Preference number: 3 (lower is better)
Translates to: LLAGGCRTLVMT*TTPFVAMMSGS
Trigger: CGAGCCTGACATCATGGCCACAAATGGCGTGGTCCATGTCATCACCAATGTTCTGCAGCCTCCAGCCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp GAGGGTCAACCGCTCACTTCCAGAGAGATGATTGCCGAGGCCGGCTTGTCTGAATTGAGCAGCTCAATGTaGACATTGCTGACCAGGGAG +
Preference number: 3 (lower is better)
Translates to: EGQPLTSREMIAEAGLSELSSSM*TLLTRE
Trigger: CTCCCTGGTCAGCAATGTCAACATTGAGCTGCTCAA...TTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGGTTGACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 72 bp TCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTTCCTaGGGTCTGTTGGCTGGAGGCTGCAGAACATTGGTG +
Preference number: 3 (lower is better)
Translates to: SSAESASSSPLS*GLLAGGCRTLV
Trigger: CACCAATGTTCTGCAGCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 72 bp TTGTTGGTGATGGTGGAGATGACCTTATCGATGAGGTaGACCACCCCGTTGGTTGCATGGTGGTCGGCTTTC +
Preference number: 3 (lower is better)
Translates to: LLVMVEMTLSMR*TTPLVAWWSAF
Trigger: GAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAAGGTCATCTCCACCATCACCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 72 bp AGACAGCCCCGCAACGATGGCTTCAGCACACATAGCTaGCTTCAAGATGTGGTTGTTCAGCAGGTCTCTCAG +
Preference number: 3 (lower is better)
Translates to: RQPRNDGFSTHS*LQDVVVQQVSQ
Trigger: CTGAGAGACCTGCTGAACAACCACATCTTGAAGTCAGCTATGTGTGCTGAAGCCATCGTTGCGGGGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp AGCAGGTCTCTCAGGGCTTCTGGGTCGCCCAGGATACGGTTCAAAGTCTCACTAATGATCTGCTGGATGTaGTTGGTGATGGTGGAGATG +
Preference number: 3 (lower is better)
Translates to: SRSLRASGSPRIRFKVSLMICWM*LVMVEM
Trigger: CATCTCCACCATCACCAACAACATCCAGCAGATCAT...TAGTGAGACTTTGAACCGTATCCTGGGCGACCCAGAAGCCCTGAGAGACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp GCACACATAGCTGACTTCAAGATGTGGTTGTTCAGCAGGTCTCTCAGGGCTTCTCCTTCAAGCATCGTGTaGAGCCCTGATGCAGCCACA +
Preference number: 3 (lower is better)
Translates to: AHIADFKMWLFSRSLRASPSSIV*SPDAAT
Trigger: TGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGG...AGAAGCCCTGAGAGACCTGCTGAACAACCACATCTTGAAGTCAGCTATGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp CAGGGCCCCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTGGTATTTCAGGCTAGGATGTCTTTATaGGAGATGATCGCCTTCCCG +
Preference number: 3 (lower is better)
Translates to: QGPDASANQDFITNVVFQARMSL*EMIAFP
Trigger: CGGGAAGGCGATCATCTCCAATAAAGACATCCTAGC...CTGAAATACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp ACCAGCATGCTAAAGCGATTGTCTCCCTTCAGGACATCCATGACAGTCCCCATTAGCTCAATGTTGACATaGCTGACCAGGGAGTCCAGC +
Preference number: 3 (lower is better)
Translates to: TSMLKRLSPFRTSMTVPISSMLT*LTRESS
Trigger: GCTGGACTCCCTGGTCAGCAATGTCAACATTGAGCT...AATGGGGACTGTCATGGATGTCCTGAAGGGAGACAATCGCTTTAGCATGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 72 bp ACCTCTGGGAAGCCCTGGAAAACGCTGATGCTTGTTTaGAGATCTCAAGCGCAGAGTCTGCAAGTTCATCCC +
Preference number: 3 (lower is better)
Translates to: TSGKPWKTLMLV*RSQAQSLQVHP
Trigger: GGGATGAACTTGCAGACTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGTTTTCCAGGGCTTCCCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR TCA 72 bp TGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGCAGTaGCATCCAAGTTTCTGCATGCAGTGGGTTAACAGC +
Preference number: 3 (lower is better)
Translates to: WDRSSLEVNVRQ*HPSFCMQWVNS
Trigger: GCTGTTAACCCACTGCATGCAGAAACTTGGATGTCACTGCCTGACATTCACTTCCAGAGAGGACCTATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR GCA 72 bp GGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTTCAAGCTAATGCTTCA +
Preference number: 3 (lower is better)
Translates to: GNLREIGGELPW*IPPVVLQANAS
Trigger: TGAAGCATTAGCTTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503087.1
ENST00000507018.5
3UTR CCA 72 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATaGTGCGGCCCATGTACATTAAAGTGTGATACTTGG +
Preference number: 3 (lower is better)
Translates to: LLPHMHKAHISL*CGPCTLKCDTW
Trigger: CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR CCA 72 bp TTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTaGGATAGGTCCTCTCTGGAAGTGAATGTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: FQGLGIGSQFHI*DRSSLEVNVRQ
Trigger: CTGCCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR CCA 72 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTaGTGCATTCCTCCTGTAGTGCTTCAAGCTAATGCT +
Preference number: 3 (lower is better)
Translates to: CGNLREIGGELP*CIPPVVLQANA
Trigger: AGCATTAGCTTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503087.1
ENST00000507018.5
3UTR CCA 72 bp CCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTaGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCT +
Preference number: 3 (lower is better)
Translates to: PMPPLTRISSPM*YFRMLASSLAS
Trigger: AGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR GCA 72 bp CTCCCCCACATGCACAAGGCTCACATCTCATTATGGTaGGGCCCATGTACATTAAAGTGTGATACTTGGTTT +
Preference number: 3 (lower is better)
Translates to: LPHMHKAHISLW*GPCTLKCDTWF
Trigger: AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR CCA 72 bp GTGGTTCCGAAGCAAATTCCTTGTATGGGCATCAATTaGAGGGGTTCCATCTTTGAATACAGAATTCAGGGG +
Preference number: 3 (lower is better)
Translates to: VVPKQIPCMGIN*RGSIFEYRIQG
Trigger: CCCCTGAATTCTGTATTCAAAGATGGAACCCCTCCAATTGATGCCCATACAAGGAATTTGCTTCGGAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 72 bp AGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCTaGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTT +
Preference number: 3 (lower is better)
Translates to: RVCPWYRYLEAS*SLIMWFRSKFL
Trigger: AAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCTAAGTATCTGTACCATGGACAGACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR-3UTR CAA 90 bp TTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAAATTCAAATAGTGTCTaGGCTGAGTCTGGGATGAGT +
Preference number: 3 (lower is better)
Translates to: FITNVVFQDVGKFLGISQNSNSV*AESGMS
Trigger: ACTCATCCCAGACTCAGCCAAGACACTATTTGAATT...TTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR-3UTR CAA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACGCAACAGGCTCCTTGTaGACACTCACCACATTGTTT +
Preference number: 3 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNATGSL*TLTTLF
Trigger: AAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTGC...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 72 bp TACAGATACTTAGAGGCCAGCTGGTCTTTAATTATGTaGTTCCGAAGCAAATTCCTTGTATGGGCATCAATT +
Preference number: 3 (lower is better)
Translates to: YRYLEASWSLIM*FRSKFLVWASI
Trigger: AATTGATGCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCTAAGTATCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR TCA 72 bp CATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTaGTACTTGGTTTTGAAAACATTCAAACAGTCTCTG +
Preference number: 3 (lower is better)
Translates to: HLIMVRPMYIKV*YLVLKTFKQSL
Trigger: CAGAGACTGTTTGAATGTTTTCAAAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR CCA 72 bp TCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTTCCATCTTTGAATACA +
Preference number: 3 (lower is better)
Translates to: SLIMWFRSKFLV*ASIGGVPSLNT
Trigger: TGTATTCAAAGATGGAACCCCTCCAATTGATGCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CCA 72 bp GAATTCAAGAAGGACTTATTCCTTCACAATACAGGTTaGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: EFKKDLFLHNTG*IIVWFILKGLQ
Trigger: CTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATTGTGAAGGAATAAGTCCTTCTTGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604555.5
3UTR-3UTR CAA 90 bp CAATACAGGTTGGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAGAAAAAGAGAAATTATTTCCTTCCTaGTCAGCAACCAGTTCTCAT +
Preference number: 3 (lower is better)
Translates to: QYRLDNCVVYSQRPPEKEKLFPS*SATSSH
Trigger: ATGAGAACTGGTTGCTGACAAGGAAGGAAATAATTT...CTCTTTTTCTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR GCA 90 bp CCAGGAGGGTCAACCGCTCACTTCCAGAGAGATGATTGCCGAGGCCGGCTTGTCCACACGTTGGGGCCGTaGTGGCGGCCCCGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PGGSTAHFQRDDCRGRLVHTLGP*WRPRSL
Trigger: CAGGCTCCGGGGCCGCCAGCACGGCCCCAACGTGTG...GACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGGTTGACCCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp TCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGGCACCCGGTCCATCGTaGACAGGGTCCCGTACCTCC +
Preference number: 4 (lower is better)
Translates to: SIVNRVPYLPLLSWAAMQAPGPS*TGSRTS
Trigger: GGAGGTACGGGACCCTGTTCACGATGGACCGGGTGC...CTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR TCA 90 bp CCCCGCTGCAGCCCACCTCCAGTGTCGTGCCCTCCAGGGTCTCTACAGACAGCCAGACTCCTTCCCGGTTaGGGGTCTCCGTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PRCSPPPVSCPPGSLQTARLLPG*GSPSVL
Trigger: CAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCT...GGCTGTCTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGGGCTGCAGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp CCCGCTGCAGCCCACCTCCAGTGTCGTGCCCTCCAGGGTCTCTACAGACAGCCCGCCTCAGCTTCTCCGTaGGGTCCGTGTACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PAAAHLQCRALQGLYRQPASASP*GPCTAE
Trigger: CTCAGCTGTACACGGACCGCACGGAGAAGCTGAGGC...GGGCTGTCTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGGGCTGCAGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp CCCGCTGCAGCCCACCTCCAGTGTCGTGCCCTCCAGGGTCTCTACAGACAGCCCTCTGCTCCGTTCTCTTaGTGGCAGGGCTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PAAAHLQCRALQGLYRQPSAPFS*WQGSEG
Trigger: GCCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGA...GGGCTGTCTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGGGCTGCAGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp CCCCGCTGCAGCCCACCTCCAGTGTCGTGCCCTCCAGGGTCTCTACAGACAGCCCCGTGTACAGCTGAGTaGTGGTGGATCCAACGACTC +
Preference number: 4 (lower is better)
Translates to: PRCSPPPVSCPPGSLQTAPCTAE*WWIQRL
Trigger: GAGTCGTTGGATCCACCACCACTCAGCTGTACACGG...GGCTGTCTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGGGCTGCAGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp CGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTTAGGTCATCTCACAGCTaGCAAGGAGGCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: REQGPVPPPLVVGRDAAVRSSHS*QGGPGL
Trigger: GAGGCCTGGGCCTCCTTGCCAGCTGTGAGATGACCT...AACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp GGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTTGAGCCCTGATGGCGGCCCCGGAGCCTaGTGTGCTGCAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GAKSVYWPLPSSIVLSPDGGPGA*CAAAPA
Trigger: AGCTGGTGCTGCAGCACAGCAGGCTCCGGGGCCGCC...ATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp CGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTTGGTCTCCGTCAGTCCTaGAGACTGGATGGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: REQGPVPPPLVVGRDAAVGLRQS*RLDGSY
Trigger: GTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACC...AACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR CAA 72 bp CGGTCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTaGTCGTGGGCCGCGATGCAGCTGTTCTCAATGCAG +
Preference number: 4 (lower is better)
Translates to: RSIVNRVPYLPL*SWAAMQLFSMQ
Trigger: CTGCATTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR TCA 90 bp CCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGGAGACTCCTTCCCGGTTaGGGGTCTCCGTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PWHLPRVCSVLLVAGLGRRLLPG*GSPSVL
Trigger: CAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCT...CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR TCA 90 bp CCCGCTGCAGCCCACCTCCAGTGTCGTGCCCTCCAGGGTCTCTACAGACAGCCCGTCTCTGTGGAAATCTaGGAGAAATTGGCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PAAAHLQCRALQGLYRQPVSVEI*EKLAES
Trigger: GCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGAC...GGGCTGTCTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGGGCTGCAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTACGTTGGGGCCGTGCTaGCGGCCCCGGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLTLGPC*RPRSLL
Trigger: CAGCAGGCTCCGGGGCCGCCAGCACGGCCCCAACGT...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp TTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAGCTACCAGCATCTCCCCCTCTTGTCGTaGGCCGCGATGCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: FPVEGLRQSCRLDGSYQHLPLLS*AAMQLF
Trigger: GAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAG...ATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp CGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTTGTCCTGCAGACTGGATaGCAGCTACCAGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: REQGPVPPPLVVGRDAAVVLQTG*QLPACL
Trigger: CAAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGAC...AACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR TCA 90 bp CCCGCTGCAGCCCACCTCCAGTGTCGTGCCCTCCAGGGTCTCTACAGACAGCCCGAGGGGTTCCATCTTTaGATACAGAATTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PAAAHLQCRALQGLYRQPEGFHL*IQNSGE
Trigger: CTCCCCTGAATTCTGTATTCAAAGATGGAACCCCTC...GGGCTGTCTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGGGCTGCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp CTCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGGCACCCGGTCCATCGTaGACAGGGTCCCGTACCTCC +
Preference number: 4 (lower is better)
Translates to: LKRRVCKFIPSFLRSVGWAPGPS*TGSRTS
Trigger: GGAGGTACGGGACCCTGTTCACGATGGACCGGGTGC...CCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp ACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTTCTCAATGCACAAAGAGGGAGTaGTTCCAGGCTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TGSRTSPSCRGPRCSCSQCTKRE*FQAPAL
Trigger: GAGAGCTGGAGCCTGGAATCACTCCCTCTTTGTGCA...TTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR GCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTGGCGGCCCCGGAGCCTaGTGTGCTGCAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLGGPGA*CAAAPA
Trigger: AGCTGGTGCTGCAGCACAGCAGGCTCCGGGGCCGCC...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR GCA 90 bp TCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCATCTCCCAAGAGTCTaGTCCGTTCTCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SIVNRVPYLPLLSWAAMQHLPRV*SVLLVA
Trigger: TGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATG...CTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGAGCTGGTAGGGCGACTTaGCGGGACCCGCCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRAGRAT*RDPPGS
Trigger: CGACCCTGGCGGGTCCCGCCAAGTCGCCCTACCAGC...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR TCA 90 bp GGGGTCAGCACCCGGTCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGGTGAATGTCAGGCAGTaGCATCCAAGTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: GVSTRSIVNRVPYLPLLSVNVRQ*HPSFCM
Trigger: CATGCAGAAACTTGGATGTCACTGCCTGACATTCAC...CGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGACCGGGTGCTGACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp TCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGGTCTCTCAGGGCTTCTaGGTCGCCCAGGATACGGTT +
Preference number: 4 (lower is better)
Translates to: SLASPKSLLRSLGGRARKVSQGF*VAQDTV
Trigger: AACCGTATCCTGGGCGACCCAGAAGCCCTGAGAGAC...CTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp GGTCTCCGTCAGTCCTGCAGACTGGATGGCAGCTACCAGCATGCTAAAGCGATTCGGTCCGTGTACAGCTaGGTGGTGGTGGATCCAACG +
Preference number: 4 (lower is better)
Translates to: GLRQSCRLDGSYQHAKAIRSVYS*VVVDPT
Trigger: CGTTGGATCCACCACCACTCAGCTGTACACGGACCG...AATCGCTTTAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp TTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAGCTACCAGCATTCACTTCCAGAGAGATaGTTGCCGAGGCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FPVEGLRQSCRLDGSYQHSLPER*LPRPAC
Trigger: ACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGA...ATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR TCA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACAAGACTCCTTCCCGGTTaGGGGTCTCCGTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTRLLPG*GSPSVL
Trigger: CAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCT...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp GGCCTCATTGGTCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTCACCACCCCGTTGGTTaGATGGTGGTCGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GLIGRGQKRVLAVTFKHRHHPVG*MVVGFQ
Trigger: CTGAAAGCCGACCACCATGCAACCAACGGGGTGGTG...ACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp ACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTTCTCAACTCAAGCGCAGAGTCTaGAAGTTCATCCCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TGSRTSPSCRGPRCSCSQLKRRV*KFIPSF
Trigger: GAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGAG...TTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACCCGTTGGTTGCATGGTaGTCGGCTTTCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHPLVAW*SAFSSR
Trigger: CCGGCTGCTGAAAGCCGACCACCATGCAACCAACGG...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CCA 90 bp TCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATCTCCCCCTCTTGTCGTaGGCCGCGATGCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SSPTCTRLTSHYGAAHVHLPLLS*AAMQLF
Trigger: GAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAG...ATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCATCGTGTTGAGCCCTaGTGCAGCCACAGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLHRVEP*CSHSSP
Trigger: CGGGCTGCTGTGGCTGCATCAGGGCTCAACACGATG...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR TCA 90 bp CTCGAAGGCCTCATTGGTCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCTTCAAGCATCGTGTTaGGCCCTGATGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LEGLIGRGQKRVLAVTFKLQASC*ALMQPQ
Trigger: CTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAG...CTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCCTTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp TTGCCGCCCAGAGTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCCGAGGCCGGCTTGTCTaGAAAGGTCAATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPPRVSRVCPWYRYLEASRGRLV*KGQWLW
Trigger: CCACAGCCATTGACCTTTTCAGACAAGCCGGCCTCG...GCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAACTCTGGGCGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR TCA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACCGCCATTTGTGGCCATaGTGTCAGGCTCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHRHLWP*CQARQQ
Trigger: CTGTTGCCGAGCCTGACATCATGGCCACAAATGGCG...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CAAAGTCTCACTAGGGATCTTCTCGAAGGCCTCATTGGTCGGGGCCAAAAGCGTCCACCTCCAGTGTCGTaGCCTCCAGGGTCTCTACAG +
Preference number: 4 (lower is better)
Translates to: QSLTRDLLEGLIGRGQKRPPPVS*PPGSLQ
Trigger: CTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGG...ACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAAGATCCCTAGTGAGACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp GCCGCCCAGAGTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCTGTGTCGTGGGCCGCGATaGAGCTGTTCTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: AAQSFQGLSMVQILRGQLCRGPR*SCSQCR
Trigger: TCTGCATTGAGAACAGCTGCATCGCGGCCCACGACA...CAGCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAACTCTGGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR GCA 90 bp CAACCGCTCACTTCCAGAGAGATGATTGCCGAGGCCGGCTTGTCTGAAAAGGTCGGTCTCCGTCAGTCCTaGAGACTGGATGGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: QPLTSREMIAEAGLSEKVGLRQS*RLDGSY
Trigger: GTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACC...GACCTTTTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGAACGTTGGGGCCGTGCTaGCGGCCCCGGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGTLGPC*RPRSLL
Trigger: CAGCAGGCTCCGGGGCCGCCAGCACGGCCCCAACGT...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACACAGCTGAGTGGTGGTaGATCCAACGACTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHTAEWW*IQRLPG
Trigger: CCCTGGGAGTCGTTGGATCCACCACCACTCAGCTGT...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CCA 90 bp GGGGTCAGCACCCGGTCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGATCTCAATGATCTGCTaGATGTTGTTGGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: GVSTRSIVNRVPYLPLLSISMIC*MLLVMV
Trigger: CACCATCACCAACAACATCCAGCAGATCATTGAGAT...CGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGACCGGGTGCTGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCTCCCCCTCTTGTCGTaGGCCGCGATGCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLLPLLS*AAMQLF
Trigger: GAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAG...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CAGTCCTGCAGACTGGATGGCAGCTACCAGCATGCTTGGTTTTCATGCCCTCCGGTCAGTCCTGCAGACTaGATGGCAGCTACCAGCATG +
Preference number: 4 (lower is better)
Translates to: QSCRLDGSYQHAWFSCPPVSPAD*MAATSM
Trigger: CATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGAC...CGGAGGGCATGAAAACCAAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR CCA 90 bp CGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTTGGAAGGCTTCATTTGTaGGAGCAAAGACTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: REQGPVPPPLVVGRDAAVGRLHL*EQRLCR
Trigger: TCTACACAGTCTTTGCTCCCACAAATGAAGCCTTCC...AACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp TCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTCTGCTCCGTTCTCTTaGTGGCAGGGCTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSPTCTRLTSHYGAAHVHSAPFS*WQGSEG
Trigger: GCCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGA...ATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAATCTGCTCCGTTCTCTTaGTGGCAGGGCTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQSAPFS*WQGSEG
Trigger: GCCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGA...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAGCTACCAGCATTCCAGCTTGTCACCTTaGAGAGACTTTAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: FPVEGLRQSCRLDGSYQHSSLSP*RDFSRT
Trigger: GGTGCGGCTAAAGTCTCTCCAAGGTGACAAGCTGGA...ATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp AAGTTCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGAGTCGCACAGACCTCTaGGAAGCCCTGGAAAACGCT +
Preference number: 4 (lower is better)
Translates to: KFLGISQESAPFSWWQGSSRTDL*EALENA
Trigger: AGCGTTTTCCAGGGCTTCCCAGAGGTCTGTGCGACT...CGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCGGCGGAGAGCTGCCGTaGTGCATTCCTCCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSGGELP*CIPPVV
Trigger: CACTACAGGAGGAATGCACCACGGCAGCTCTCCGCC...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAGGCGGAGAGCTGCCGTaGTGCATTCCTCCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQGGELP*CIPPVV
Trigger: CACTACAGGAGGAATGCACCACGGCAGCTCTCCGCC...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR CAA 72 bp AAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTaGAGCCCTGATGCAGCCACAGCAGCCCGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KSVYWPLPSSIV*SPDAATAARRV
Trigger: GACCCTTCGGGCTGCTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CAA 72 bp GTTCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTaGGTGGCAGGGCTCGGAAGGCTTCATTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VPWHLPRVCSVL*VAGLGRLHLWE
Trigger: CTCCCACAAATGAAGCCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR TCA 90 bp CTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTCGAGGCCGGCTTGTCTaGAAAGGTCAATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LCGNLREIGGELPWCIPPRGRLV*KGQWLW
Trigger: CCACAGCCATTGACCTTTTCAGACAAGCCGGCCTCG...AGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGAGGCTGCAGAACATTGGCGAGGCCGGCTTGTCTaGAAAGGTCAATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QVHPLFPEVCWLEAAEHWRGRLV*KGQWLW
Trigger: CCACAGCCATTGACCTTTTCAGACAAGCCGGCCTCG...CCAATGTTCTGCAGCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAACGAGGCCGGCTTGTCTaGAAAGGTCAATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQRGRLV*KGQWLW
Trigger: CCACAGCCATTGACCTTTTCAGACAAGCCGGCCTCG...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGAGCACCCGGTCCATCGTaGACAGGGTCCCGTACCTCC +
Preference number: 4 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGAPGPS*TGSRTS
Trigger: GGAGGTACGGGACCCTGTTCACGATGGACCGGGTGC...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCCGCCATTTGTGGCCATaGTGTCAGGCTCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSRHLWP*CQARQQ
Trigger: CTGTTGCCGAGCCTGACATCATGGCCACAAATGGCG...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCATCCCCTCTTTCCTaGGGTCTGTTGGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QSLWKSERNWRRAAVVHSSSPLS*GLLAGG
Trigger: GCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGA...GGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR TCA 90 bp CAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGAGGCTGCAGAACATTGGTCATCCCCTCTTTCCTaGGGTCTGTTGGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QVHPLFPEVCWLEAAEHWSSPLS*GLLAGG
Trigger: GCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGA...CCAATGTTCTGCAGCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAATCATCCCCTCTTTCCTaGGGTCTGTTGGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQSSPLS*GLLAGG
Trigger: GCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGA...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR GCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTCACACGTTGGGGCCGTaGTGGCGGCCCCGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFHTLGP*WRPRSL
Trigger: CAGGCTCCGGGGCCGCCAGCACGGCCCCAACGTGTG...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR GCA 90 bp TCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGCTGTTGGCTGGAGGCTaGAGAACATTGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: SLASPKSLLRSLGGRARKLLAGG*RTLVMT
Trigger: TGTCATCACCAATGTTCTGCAGCCTCCAGCCAACAG...CTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp CTCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LKRRVCKFIPSFLRSVGWGELPW*IPPVVL
Trigger: AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC...CCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp ACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTTCTCAAATCCAAGTTTCTGCATaGAGTGGGTTAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: TGSRTSPSCRGPRCSCSQIQVSA*SGLTAM
Trigger: CATGGCTGTTAACCCACTGCATGCAGAAACTTGGAT...TTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp ATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTGTATGGGCATCAATTaGAGGGGTTCCATCTTTGAA +
Preference number: 4 (lower is better)
Translates to: IVNRVPYLPLLSWAAMQLCMGIN*RGSIFE
Trigger: TTCAAAGATGGAACCCCTCCAATTGATGCCCATACA...CAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGCTCCCCCTCTTGTCGTaGGCCGCGATGCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVLPLLS*AAMQLF
Trigger: GAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAG...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp AGTTCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAATCTGAGAGAAATTaGCGGAGAGCTGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSLASPKSLLRSLGGRARKSERN*RRAAVV
Trigger: CACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTT...CCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CAA 72 bp GCTAGGATGTCTTTATTGGAGATGATCGCCTTCCCGTaGATAGTGAGCATGTCCCCGCTGCAGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ARMSLLEMIAFP*IVSMSPLQPTS
Trigger: GGAGGTGGGCTGCAGCGGGGACATGCTCACTATCAACGGGAAGGCGATCATCTCCAATAAAGACATCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAATCACTTCCAGAGAGATaGTTGCCGAGGCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQSLPER*LPRPAC
Trigger: ACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGA...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp TCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTCACTTCCAGAGAGATaGTTGCCGAGGCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SSPTCTRLTSHYGAAHVHSLPER*LPRPAC
Trigger: ACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGA...ATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGGCAACAGGCTCCTTGTTaGCACTCACCACATTGTTTT +
Preference number: 4 (lower is better)
Translates to: PWHLPRVCSVLLVAGLGRQQAPC*HSPHCF
Trigger: AAAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTG...CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTACGCCATTTGTGGCCATaGTGTCAGGCTCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVRHLWP*CQARQQ
Trigger: CTGTTGCCGAGCCTGACATCATGGCCACAAATGGCG...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTACAGTCAGGACTCGCCTaGCCACCATATGGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVQSGLA*PPYGSG
Trigger: TCCGCTACCATATGGTGGGCAGGCGAGTCCTGACTG...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR GCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGGTCTCCGTCAGTCCTaGAGACTGGATGGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVGLRQS*RLDGSY
Trigger: GTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACC...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QSLWKSERNWRRAAVVHSGELPW*IPPVVL
Trigger: AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC...GGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAAAATTGGCGGAGAGCTaGCGTGGTGCATTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQKLAES*RGAFLL
Trigger: CAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTT...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp GGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAGCTAATGCTTCATCCAAATTGGCGGAGAGCTaGCGTGGTGCATTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GELPWCIPPVVLQANASSKLAES*RGAFLL
Trigger: CAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTT...GGATGAAGCATTAGCTTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503087.1
ENST00000507018.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCCCCTCCTCCCCCACATaGACAAGGCTCACATCTCAT +
Preference number: 4 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSPSSPT*TRLTSH
Trigger: ATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAGGG...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTGCACGAAGAGCGCCATaGAGCGGGACGACGCGCACC +
Preference number: 4 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTARRAP*SGTTRT
Trigger: GGTGCGCGTCGTCCCGCTCCATGGCGCTCTTCGTGC...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTCTCTCAGGGCTTCTaGGTCGCCCAGGATACGGTT +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVVSQGF*VAQDTV
Trigger: AACCGTATCCTGGGCGACCCAGAAGCCCTGAGAGAC...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAGCTACCAGCATAAAGGTCAATGGCTGTaGACACATCAGACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FPVEGLRQSCRLDGSYQHKGQWL*THQTLQ
Trigger: CTGCAGAGTCTGATGTGTCCACAGCCATTGACCTTT...ATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp CGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTTTACTTAGAGGCCAGCTaGTCTTTAATTATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: REQGPVPPPLVVGRDAAVYLEAS*SLIMWF
Trigger: GAACCACATAATTAAAGACCAGCTGGCCTCTAAGTA...AACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp GGGGTCAGCACCCGGTCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGATTTCATCACCAATGTaGTATTTCAGGATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GVSTRSIVNRVPYLPLLSISSPM*YFRMLA
Trigger: TGCCAACATCCTGAAATACCACATTGGTGATGAAAT...CGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGACCGGGTGCTGACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
3UTR CAA 72 bp CCGCTCACTTCCAGAGAGATGATTGCCGAGGCCGGCTaGTCTGAAAAGGTCAATGGCTGTGGACACATCAGA +
Preference number: 4 (lower is better)
Translates to: PLTSREMIAEAG*SEKVNGCGHIR
Trigger: TCTGATGTGTCCACAGCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp CTTATCGATGAGGTGCACCACCCCGTTGGTTGCATGGTGGTCGGCTTTCAGCAGTGTCCTCGATCTCAATaGTCTGCTGGATGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LIDEVHHPVGCMVVGFQQCPRSQ*SAGCCW
Trigger: CCAACAACATCCAGCAGATCATTGAGATCGAGGACA...CTGCTGAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp AGGCCTCATTGGTCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGGCTGAGTCTGGGATaGGTAGCTCATCAATGTAGT +
Preference number: 4 (lower is better)
Translates to: RPHWSGPKACTGRYLQASWLSLG*VAHQCS
Trigger: ACTACATTGATGAGCTACTCATCCCAGACTCAGCCA...CGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTGCACCCGGTCCATCGTaGACAGGGTCCCGTACCTCC +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLAPGPS*TGSRTS
Trigger: GGAGGTACGGGACCCTGTTCACGATGGACCGGGTGC...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGAAGACTCCTTCCCGGTTaGGGGTCTCCGTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGRLLPG*GSPSVL
Trigger: CAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCT...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp GGCCTCATTGGTCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTAGCCCTGGAAAACGCTaGTGCTTGTTTGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: GLIGRGQKRVLAVTFKHRSPGKR*CLFEDL
Trigger: GAGATCTTCAAACAAGCATCAGCGTTTTCCAGGGCT...ACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp CAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCGGTCCTCTCTGGAAGTaGATGTCAGGCAGTGACATC +
Preference number: 4 (lower is better)
Translates to: QSLWKSERNWRRAAVVHSGPLWK*MSGSDI
Trigger: GATGTCACTGCCTGACATTCACTTCCAGAGAGGACC...GGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCGGTCCTCTCTGGAAGTaGATGTCAGGCAGTGACATC +
Preference number: 4 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSGPLWK*MSGSDI
Trigger: GATGTCACTGCCTGACATTCACTTCCAGAGAGGACC...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAGGTCCTCTCTGGAAGTaGATGTCAGGCAGTGACATC +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQGPLWK*MSGSDI
Trigger: GATGTCACTGCCTGACATTCACTTCCAGAGAGGACC...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGAGGCTGCAGAACATTGGACCTTATCGATGAGGTaGACCACCCCGTTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: QVHPLFPEVCWLEAAEHWTLSMR*TTPLVA
Trigger: TGCAACCAACGGGGTGGTGCACCTCATCGATAAGGT...CCAATGTTCTGCAGCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTATGTCGTGGGCCGCGATaGAGCTGTTCTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVCRGPR*SCSQCR
Trigger: TCTGCATTGAGAACAGCTGCATCGCGGCCCACGACA...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp TCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGCATGCTTGGTTTTCATaGCCTCCGTATGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: SLASPKSLLRSLGGRARKHAWFS*PPYAQR
Trigger: TCTTTGTGCATACGGAGGGCATGAAAACCAAGCATG...CTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTACAGCTGAGTGGTaGTGGATCCAACGACTCCCA +
Preference number: 4 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSCTAEW*WIQRLP
Trigger: TGGGAGTCGTTGGATCCACCACCACTCAGCTGTACA...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp AGTCTGCAAGTTCATCCCCTCTTTCCTGAGGTCTGTTGGCTGGAGGCTGCAGAATGTACAGCTGAGTGGTaGTGGATCCAACGACTCCCA +
Preference number: 4 (lower is better)
Translates to: SLQVHPLFPEVCWLEAAECTAEW*WIQRLP
Trigger: TGGGAGTCGTTGGATCCACCACCACTCAGCTGTACA...TTCTGCAGCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTGCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCCGTGTACAGCTGAGTaGTGGTGGATCCAACGACTC +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLPCTAE*WWIQRL
Trigger: GAGTCGTTGGATCCACCACCACTCAGCTGTACACGG...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGGTCCAGCACTTCAGCTaGCAAGGAGGCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRVQHFS*QGGPGL
Trigger: GAGGCCTGGGCCTCCTTGCCAGCTGAAGTGCTGGAC...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CCA 90 bp GCTGATGCTTGTTTGAAGATCTCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTCCGTTGGTTGCATGGTaGTCGGCTTTCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ADACLKISSAESASSSPLPLVAW*SAFSSR
Trigger: CCGGCTGCTGAAAGCCGACCACCATGCAACCAACGG...AAGAGGGGATGAACTTGCAGACTCTGCGCTTGAGATCTTCAAACAAGCATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGATCTCGAAGGCCTCATTaGTCGGGGCCAAAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRSRRPH*SGPKAC
Trigger: ACACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGA...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CCA 90 bp AGCAAAGACTGTGTAGACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGAGGATCACCCCGTTGGTaGCTAGGATGTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: SKDCVDSFPVEGLRQSCRGSPRW*LGCLYW
Trigger: CCAATAAAGACATCCTAGCCACCAACGGGGTGATCC...TCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTACACAGTCTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTCAGTCCTGCAGACTaGATGGCAGCTACCAGCATG +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVVSPAD*MAATSM
Trigger: CATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGAC...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTCCAGCTTGTCACCTTaGAGAGACTTTAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: SSPTCTRLTSHYGAAHVHSSLSP*RDFSRT
Trigger: GGTGCGGCTAAAGTCTCTCCAAGGTGACAAGCTGGA...ATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACACATTGGTGATGACATaGACCACGCCATTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHTLVMT*TTPFVA
Trigger: GGCCACAAATGGCGTGGTCCATGTCATCACCAATGT...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAACTGAGGTCTGTTGGCTaGAGGCTGCAGAACATTGGT +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQLRSVG*RLQNIG
Trigger: ACCAATGTTCTGCAGCCTCCAGCCAACAGACCTCAG...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
3UTR CAA 72 bp TTCAAAGTCTCACTAGGGATCTTCTCGAAGGCCTCATaGGTCGGGGCCAAAAGCGTGTACTGGCCGTTACCT +
Preference number: 4 (lower is better)
Translates to: FKVSLGIFSKAS*VGAKSVYWPLP
Trigger: AGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAAGATCCCTAGTGAGACTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp AGCAGGTCTCTCAGGGCTTCTGGGTCGCCCAGGATACGGTTCAAAGTCTCACTAACGCTGATGCTTGTTTaGAGATCTCAAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SRSLRASGSPRIRFKVSLTLMLV*RSQAQS
Trigger: ACTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGT...TAGTGAGACTTTGAACCGTATCCTGGGCGACCCAGAAGCCCTGAGAGACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp CTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTCTCTGTGGAAATCTaGGAGAAATTGGCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LCGNLREIGGELPWCIPPVSVEI*EKLAES
Trigger: GCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGAC...AGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCGTCTCTGTGGAAATCTaGGAGAAATTGGCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QSLWKSERNWRRAAVVHSVSVEI*EKLAES
Trigger: GCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGAC...GGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp TCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATGTCTCTGTGGAAATCTaGGAGAAATTGGCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SSPTCTRLTSHYGAAHVHVSVEI*EKLAES
Trigger: GCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGAC...ATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp GAAGATACAGCAGAAGAGAGAAGGCACCTTTTGGACCAAGGAGGGCTGTATTTTCCACCTCCAGTGTCGTaGCCTCCAGGGTCTCTACAG +
Preference number: 4 (lower is better)
Translates to: EDTAEERRHLLDQGGLYFPPPVS*PPGSLQ
Trigger: CTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGG...AAAATACAGCCCTCCTTGGTCCAAAAGGTGCCTTCTCTCTTCTGCTGTATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR GCA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGAGGTCTCCGTCAGTCCTaGAGACTGGATGGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGGLRQS*RLDGSY
Trigger: GTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACC...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTCTGTTGGCTGGAGGCTaGAGAACATTGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: LCGNLREIGGELPWCIPPLLAGG*RTLVMT
Trigger: TGTCATCACCAATGTTCTGCAGCCTCCAGCCAACAG...AGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp ACATCAGACTCTGCAGCCAATTCAAATAGTGTCTTGGCTGAGTCTGGGATGAGTGGTGCACCACCCCGTTaGTTGCATGGTGGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: TSDSAANSNSVLAESGMSGAPPR*LHGGRL
Trigger: AAGCCGACCACCATGCAACCAACGGGGTGGTGCACC...ACTCATCCCAGACTCAGCCAAGACACTATTTGAATTGGCTGCAGAGTCTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACAAGTGGATCACCCCGTTaGTGGCTAGGATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTSGSPR*WLGCLY
Trigger: ATAAAGACATCCTAGCCACCAACGGGGTGATCCACT...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACAAAGGTCAATGGCTGTaGACACATCAGACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHKGQWL*THQTLQ
Trigger: CTGCAGAGTCTGATGTGTCCACAGCCATTGACCTTT...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000514554.5
CDS-3UTR CCA 90 bp TTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAGCTACCAGCATAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: FPVEGLRQSCRLDGSYQHSKFLV*ASIGGV
Trigger: AACCCCTCCAATTGATGCCCATACAAGGAATTTGCT...ATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp ATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTGGTCTTTAATTATGTaGTTCCGAAGCAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: IVNRVPYLPLLSWAAMQLWSLIM*FRSKFL
Trigger: AAGGAATTTGCTTCGGAACCACATAATTAAAGACCA...CAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAATCCAGGGTCTGTCCATaGTACAGATACTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQSRVCP*YRYLEA
Trigger: GGCCTCTAAGTATCTGTACCATGGACAGACCCTGGA...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTTCCAGCTTGTCACCTTaGAGAGACTTTAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLSSLSP*RDFSRT
Trigger: GGTGCGGCTAAAGTCTCTCCAAGGTGACAAGCTGGA...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTTTTCCTGAGGTCTGTTaGCTGGAGGCTGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: LCGNLREIGGELPWCIPPFPEVC*LEAAEH
Trigger: ATGTTCTGCAGCCTCCAGCCAACAGACCTCAGGAAA...AGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp CTCACTTCCAGAGAGATGATTGCCGAGGCCGGCTTGTCTGAAAAGGTCAATGGCACCTCTGGGAAGCCCTaGAAAACGCTGATGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LTSREMIAEAGLSEKVNGTSGKP*KTLMLV
Trigger: AACAAGCATCAGCGTTTTCCAGGGCTTCCCAGAGGT...GCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp TCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATACCTCTGGGAAGCCCTaGAAAACGCTGATGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SSPTCTRLTSHYGAAHVHTSGKP*KTLMLV
Trigger: AACAAGCATCAGCGTTTTCCAGGGCTTCCCAGAGGT...ATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAGTCGCACAGACCTCTaGGAAGCCCTGGAAAACGCT +
Preference number: 4 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVSRTDL*EALENA
Trigger: AGCGTTTTCCAGGGCTTCCCAGAGGTCTGTGCGACT...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp CAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCAAATCTGAGAGAAATTaGCGGAGAGCTGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: QSLWKSERNWRRAAVVHSKSERN*RRAAVV
Trigger: CACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTT...GGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAAAATCTGAGAGAAATTaGCGGAGAGCTGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQKSERN*RRAAVV
Trigger: CACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTT...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATAAATCTGAGAGAAATTaGCGGAGAGCTGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSPTCTRLTSHYGAAHVHKSERN*RRAAVV
Trigger: CACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTT...ATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAATTGATAGACAGGGGCTaGAGGCTGCAGAACATTGGT +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQLIDRG*RLQNIG
Trigger: ACCAATGTTCTGCAGCCTCCAGCCCCTGTCTATCAA...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514554.5
CDS-3UTR TCA 90 bp CTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTTGTCCTCGATCTCAATaGTCTGCTGGATGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LCGNLREIGGELPWCIPPCPRSQ*SAGCCW
Trigger: CCAACAACATCCAGCAGATCATTGAGATCGAGGACA...AGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR TCA 90 bp GAAGATACAGCAGAAGAGAGAAGGCACCTTTTGGACCAAGGAGGGCTGTATTTTCGAGGCCGGCTTGTCTaGAAAGGTCAATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EDTAEERRHLLDQGGLYFRGRLV*KGQWLW
Trigger: CCACAGCCATTGACCTTTTCAGACAAGCCGGCCTCG...AAAATACAGCCCTCCTTGGTCCAAAAGGTGCCTTCTCTCTTCTGCTGTATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR TCA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACACAACAGGCTCCTTGTTaGCACTCACCACATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTQQAPC*HSPHCF
Trigger: AAAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTG...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp AGAGGCCAGCTGGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATGGGCCGCCATTTGTGGCCATaGTGTCAGGCTCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: RGQLVFNYVVPKQIPCMGRHLWP*CQARQQ
Trigger: CTGTTGCCGAGCCTGACATCATGGCCACAAATGGCG...GCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGCGCCATTTGTGGCCATaGTGTCAGGCTCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRRHLWP*CQARQQ
Trigger: CTGTTGCCGAGCCTGACATCATGGCCACAAATGGCG...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTGGGCCTGGAAAACGCTaGTGCTTGTTTGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLGPGKR*CLFEDL
Trigger: GAGATCTTCAAACAAGCATCAGCGTTTTCCAGGCCC...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503087.1
CDS-3UTR GCA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACTTCCTTTGGTACCACTaGTTGCAGTTGGTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHFLWYH*LQLVKY
Trigger: GTACTTCACCAACTGCAAGCAGTGGTACCAAAGGAA...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR GCA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGATGTCGTGGGCCGCGATaGAGCTGTTCTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGCRGPR*SCSQCR
Trigger: TCTGCATTGAGAACAGCTGCATCGCGGCCCACGACA...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCTCAAGCGCAGAGTCTaGAAGTTCATCCCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLLKRRV*KFIPSF
Trigger: GAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGAG...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR GCA 90 bp TGTGTAGACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAGGTCCAGAGAGATGTaGTCCTTTGAATACAGAATT +
Preference number: 4 (lower is better)
Translates to: CVDSFPVEGLRQSCRLDGRSREM*SFEYRI
Trigger: AATTCTGTATTCAAAGGAGCACATCTCTCTGGACCT...GCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR CCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTGGTGCACCACCCCGTTaGTTGCATGGTGGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLGAPPR*LHGGRL
Trigger: AAGCCGACCACCATGCAACCAACGGGGTGGTGCACC...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGCCAAAAGCGTGTACTaGCCGTTACCTTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVAKSVY*PLPSSI
Trigger: GATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGC...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp TCTTTGAATACAGAATTCAGGGGAGCCAGGAGGGTCAACCGCTCACTTCCAGAGGCCAAAAGCGTGTACTaGCCGTTACCTTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: SLNTEFRGARRVNRSLPEAKSVY*PLPSSI
Trigger: GATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGC...CTCTGGAAGTGAGCGGTTGACCCTCCTGGCTCCCCTGAATTCTGTATTCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp CAAAGTCTCACTAGGGATCTTCTCGAAGGCCTCATTGGTCGGGGCCAAAAGCGTAAAGGTCAATGGCTGTaGACACATCAGACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QSLTRDLLEGLIGRGQKRKGQWL*THQTLQ
Trigger: CTGCAGAGTCTGATGTGTCCACAGCCATTGACCTTT...ACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAAGATCCCTAGTGAGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTATCCAGGGTCTGTCCATaGTACAGATACTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVSRVCP*YRYLEA
Trigger: GGCCTCTAAGTATCTGTACCATGGACAGACCCTGGA...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CAGGATTTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCTGCTCCGTTCTCTTaGTGGCAGGGCTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QDFITNVVFQDVGKFLGISAPFS*WQGSEG
Trigger: GCCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGA...GATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACAGGTATTTCAGGATGTTaGCAAGTTCCTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTGISGC*QVPWHL
Trigger: GAGATGCCAAGGAACTTGCCAACATCCTGAAATACC...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACGGTATTTCAGGATGTTaGCAAGTTCCTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHGISGC*QVPWHL
Trigger: GAGATGCCAAGGAACTTGCCAACATCCTGAAATACC...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGCTGAGGTCTGTTGGCTaGAGGCTGCAGAACATTGGT +
Preference number: 4 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVLRSVG*RLQNIG
Trigger: ACCAATGTTCTGCAGCCTCCAGCCAACAGACCTCAG...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTATTTCCTGAGGTCTGTTaGCTGGAGGCTGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVFPEVC*LEAAEH
Trigger: ATGTTCTGCAGCCTCCAGCCAACAGACCTCAGGAAA...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGGGCGGAGAGCTGCCGTaGTGCATTCCTCCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWGGELP*CIPPVV
Trigger: CACTACAGGAGGAATGCACCACGGCAGCTCTCCGCC...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATCCTTTTCCAGGGACTTaGCATAGGCAGTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: SSPTCTRLTSHYGAAHVHPFPGT*HRQSIP
Trigger: TGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGG...ATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
3UTR CAA 72 bp GTGGCCATGATGTCAGGCTCGGCAACAGGCTCCTTGTaGACACTCACCACATTGTTTTTCAAGCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: VAMMSGSATGSL*TLTTLFFKLTS
Trigger: GGAAGTCAGCTTGAAAAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTGCCGAGCCTGACATCATGGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507018.5
3UTR CAA 72 bp GACCTCTGGGAAGCCCTGGAAAACGCTGATGCTTGTTaGAAGATCTCAAGCGCAGAGTCTGCAAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: DLWEALENADAC*KISSAESASSS
Trigger: GGATGAACTTGCAGACTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGTTTTCCAGGGCTTCCCAGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTTGGCTGAGTCTGGGATaGGTAGCTCATCAATGTAGT +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLWLSLG*VAHQCS
Trigger: ACTACATTGATGAGCTACTCATCCCAGACTCAGCCA...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTGAGGGGTTCCATCTTTaGATACAGAATTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLEGFHL*IQNSGE
Trigger: CTCCCCTGAATTCTGTATTCAAAGATGGAACCCCTC...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAACAACAGGCTCCTTGTTaGCACTCACCACATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQQQAPC*HSPHCF
Trigger: AAAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTG...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTCATCCCCTCTTTCCTaGGGTCTGTTGGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTSSPLS*GLLAGG
Trigger: GCCTCCAGCCAACAGACCTCAGGAAAGAGGGGATGA...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR TCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAACGCTGATGCTTGTTTaGAGATCTCAAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVTLMLV*RSQAQS
Trigger: ACTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGT...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR TCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTAGCCCTGGAAAACGCTaGTGCTTGTTTGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLSPGKR*CLFEDL
Trigger: GAGATCTTCAAACAAGCATCAGCGTTTTCCAGGGCT...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR TCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGAATGTCAGGCAGTaGCATCCAAGTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVVNVRQ*HPSFCM
Trigger: CATGCAGAAACTTGGATGTCACTGCCTGACATTCAC...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTGTGAATGTCAGGCAGTaGCATCCAAGTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: NLREIGGELPWCIPPVVLVNVRQ*HPSFCM
Trigger: CATGCAGAAACTTGGATGTCACTGCCTGACATTCAC...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp GATGGCAGCTACCAGCATGCTTGGTTTTCATGCCCTCCGTATGCACAAAGAGGGAGAGATGTGCTCCTTTaGATACAGAATTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: DGSYQHAWFSCPPYAQRGRDVLL*IQNSGE
Trigger: CTCCCCTGAATTCTGTATTCAAAGGAGCACATCTCT...CCCTCTTTGTGCATACGGAGGGCATGAAAACCAAGCATGCTGGTAGCTGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR GCA 90 bp CAGTCCTGCAGACTGGATGGCAGCTACCAGCATGCTTGGTTTTCATGCCCTCCGTGCAGCTGTTCTCAATaGAGAGGCTATTACGATAAA +
Preference number: 4 (lower is better)
Translates to: QSCRLDGSYQHAWFSCPPCSCSQ*RGYYDK
Trigger: TTTATCGTAATAGCCTCTGCATTGAGAACAGCTGCA...CGGAGGGCATGAAAACCAAGCATGCTGGTAGCTGCCATCCAGTCTGCAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR GCA 90 bp GTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCTGGTCTTTAATTTGTCGTGGGCCGCGATaGAGCTGTTCTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: VSRVCPWYRYLEASWSLICRGPR*SCSQCR
Trigger: TCTGCATTGAGAACAGCTGCATCGCGGCCCACGACA...AATTAAAGACCAGCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR GCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRGELPW*IPPVVL
Trigger: AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp ACATCAGACTCTGCAGCCAATTCAAATAGTGTCTTGGCTGAGTCTGGGATGAGTCCCTCCTCCCCCACATaGACAAGGCTCACATCTCAT +
Preference number: 4 (lower is better)
Translates to: TSDSAANSNSVLAESGMSPSSPT*TRLTSH
Trigger: ATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAGGG...ACTCATCCCAGACTCAGCCAAGACACTATTTGAATTGGCTGCAGAGTCTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCATCCAAGTTTCTGCATaGAGTGGGTTAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSIQVSA*SGLTAM
Trigger: CATGGCTGTTAACCCACTGCATGCAGAAACTTGGAT...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp AATTCAGGGGAGCCAGGAGGGTCAACCGCTCACTTCCAGAGAGATGATTGCCGACCATTTCTCCAGCTGTaGAAGGGCTTTACAAAAACT +
Preference number: 4 (lower is better)
Translates to: NSGEPGGSTAHFQRDDCRPFLQL*KGFTKT
Trigger: AGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGG...TCGGCAATCATCTCTCTGGAAGTGAGCGGTTGACCCTCCTGGCTCCCCTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGACCCCGTTGGTTGCATaGTGGTCGGCTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWTPLVA*WSAFSS
Trigger: GCTGCTGAAAGCCGACCACCATGCAACCAACGGGGT...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGAACCCCGTTGGTTGCATaGTGGTCGGCTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGTPLVA*WSAFSS
Trigger: GCTGCTGAAAGCCGACCACCATGCAACCAACGGGGT...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACATCTCAATGATCTGCTaGATGTTGTTGGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHISMIC*MLLVMV
Trigger: CACCATCACCAACAACATCCAGCAGATCATTGAGAT...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CCA 90 bp AGAGGCCAGCTGGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATGGGCTCTCGAAGGCCTCATTaGTCGGGGCCAAAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: RGQLVFNYVVPKQIPCMGSRRPH*SGPKAC
Trigger: ACACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGA...GCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp GAAGATACAGCAGAAGAGAGAAGGCACCTTTTGGACCAAGGAGGGCTGTATTTTTCTCGAAGGCCTCATTaGTCGGGGCCAAAAGCGTGT +
Preference number: 4 (lower is better)
Translates to: EDTAEERRHLLDQGGLYFSRRPH*SGPKAC
Trigger: ACACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGA...AAAATACAGCCCTCCTTGGTCCAAAAGGTGCCTTCTCTCTTCTGCTGTATCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGGTCTCTCAGGGCTTCTaGGTCGCCCAGGATACGGTT +
Preference number: 4 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWVSQGF*VAQDTV
Trigger: AACCGTATCCTGGGCGACCCAGAAGCCCTGAGAGAC...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TCTTTGAATACAGAATTCAGGGGAGCCAGGAGGGTCAACCGCTCACTTCCAGAGGCTGACTTCAAGATGTaGTTGTTCAGCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLNTEFRGARRVNRSLPEADFKM*LFSRSL
Trigger: GAGAGACCTGCTGAACAACCACATCTTGAAGTCAGC...CTCTGGAAGTGAGCGGTTGACCCTCCTGGCTCCCCTGAATTCTGTATTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp ACATCAGACTCTGCAGCCAATTCAAATAGTGTCTTGGCTGAGTCTGGGATGAGTGTCAGTCCTGCAGACTaGATGGCAGCTACCAGCATG +
Preference number: 4 (lower is better)
Translates to: TSDSAANSNSVLAESGMSVSPAD*MAATSM
Trigger: CATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGAC...ACTCATCCCAGACTCAGCCAAGACACTATTTGAATTGGCTGCAGAGTCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp GATGGCAGCTACCAGCATGCTTGGTTTTCATGCCCTCCGTATGCACAAAGAGGGGGAAGGCTTCATTTGTaGGAGCAAAGACTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: DGSYQHAWFSCPPYAQRGGRLHL*EQRLCR
Trigger: TCTACACAGTCTTTGCTCCCACAAATGAAGCCTTCC...CCCTCTTTGTGCATACGGAGGGCATGAAAACCAAGCATGCTGGTAGCTGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR CCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGTTTCCTGAGGTCTGTTaGCTGGAGGCTGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVFPEVC*LEAAEH
Trigger: ATGTTCTGCAGCCTCCAGCCAACAGACCTCAGGAAA...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp CTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGCTCACATCTCATTATaGTGCGGCCCATGTACATTA +
Preference number: 4 (lower is better)
Translates to: LCGNLREIGGELPWCIPPAHISL*CGPCTL
Trigger: TAATGTACATGGGCCGCACCATAATGAGATGTGAGC...AGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACCGGTCCGTGTACAGCTaGGTGGTGGTGGATCCAACG +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNRSVYS*VVVDPT
Trigger: CGTTGGATCCACCACCACTCAGCTGTACACGGACCG...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR TCA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGACTTCAAGCATCGTGTTaGGCCCTGATGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGLQASC*ALMQPQ
Trigger: CTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAG...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR TCA 90 bp CCCAGAGTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCTGGTCTTTCAGCACACATAGCTaGCTTCAAGATGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: PRVSRVCPWYRYLEASWSFSTHS*LQDVVV
Trigger: AACAACCACATCTTGAAGTCAGCTATGTGTGCTGAA...AGACCAGCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAACTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAACATTGTTTTTCAAGCTaGCTTCCAGCTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQHCFSS*LPACHL
Trigger: AAGGTGACAAGCTGGAAGTCAGCTTGAAAAACAATG...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp GGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAGCTAATGCTTCATCCCATTGTTTTTCAAGCTaGCTTCCAGCTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: GELPWCIPPVVLQANASSHCFSS*LPACHL
Trigger: AAGGTGACAAGCTGGAAGTCAGCTTGAAAAACAATG...GGATGAAGCATTAGCTTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503087.1
ENST00000507018.5
CDS-3UTR TCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTACAACAGGCTCCTTGTTaGCACTCACCACATTGTTTT +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVQQAPC*HSPHCF
Trigger: AAAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTG...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGGGTCCTCTCTGGAAGTaGATGTCAGGCAGTGACATC +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRGPLWK*MSGSDI
Trigger: GATGTCACTGCCTGACATTCACTTCCAGAGAGGACC...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACGCCTCAGCTTCTCCGTaGGGTCCGTGTACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNASASP*GPCTAE
Trigger: CTCAGCTGTACACGGACCGCACGGAGAAGCTGAGGC...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR GCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTCACCACCCCGTTGGTTaGATGGTGGTCGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFHHPVG*MVVGFQ
Trigger: CTGAAAGCCGACCACCATGCAACCAACGGGGTGGTG...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR GCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACCCACCTCCAGTGTCGTaGCCTCCAGGGTCTCTACAG +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNPPPVS*PPGSLQ
Trigger: CTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGG...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWGELPW*IPPVVL
Trigger: AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTGGAGAGCTGCCGTGGTaGATTCCTCCTGTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLGELPW*IPPVVL
Trigger: AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTAAATTGGCGGAGAGCTaGCGTGGTGCATTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTKLAES*RGAFLL
Trigger: CAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTT...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAACACATCTCATTATGGTaGGGCCCATGTACATTAAAG +
Preference number: 4 (lower is better)
Translates to: LREIGGELPWCIPPVVLQHISLW*GPCTLK
Trigger: CTTTAATGTACATGGGCCGCACCATAATGAGATGTG...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGACCCTCCTCCCCCACATaGACAAGGCTCACATCTCAT +
Preference number: 4 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGPSSPT*TRLTSH
Trigger: ATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAGGG...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGAGGATCACCCCGTTGGTaGCTAGGATGTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGGSPRW*LGCLYW
Trigger: CCAATAAAGACATCCTAGCCACCAACGGGGTGATCC...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTGTATGGGCATCAATTaGAGGGGTTCCATCTTTGAA +
Preference number: 4 (lower is better)
Translates to: QSLWKSERNWRRAAVVHSCMGIN*RGSIFE
Trigger: TTCAAAGATGGAACCCCTCCAATTGATGCCCATACA...GGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTGTCAGTCCTGCAGACTaGATGGCAGCTACCAGCATG +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLVSPAD*MAATSM
Trigger: CATGCTGGTAGCTGCCATCCAGTCTGCAGGACTGAC...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp GGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAGCTAATGCTTCATCCAGTCAATTCCACATTTaGGATAGGTCCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GELPWCIPPVVLQANASSSQFHI*DRSSLE
Trigger: TTCCAGAGAGGACCTATCCCAAATGTGGAATTGACT...GGATGAAGCATTAGCTTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACAATTACAAACACACCATaGCTCTGTCACAATAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTITNTP*LCHNRE
Trigger: TTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAAT...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp GGTTTATTCTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCTTCAAGCATCGTGTTaGGCCCTGATGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GLFSKASRKRDSNPSAGSLQASC*ALMQPQ
Trigger: CTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAG...AGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAGAATAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR TCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTTCACTTCCAGAGAGATaGTTGCCGAGGCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFSLPER*LPRPAC
Trigger: ACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGA...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTCACTTCCAGAGAGATaGTTGCCGAGGCCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LKGLQKKRFQSFCRISFCSLPER*LPRPAC
Trigger: ACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGA...ACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR TCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTACATTGTTTTTCAAGCTaGCTTCCAGCTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVHCFSS*LPACHL
Trigger: AAGGTGACAAGCTGGAAGTCAGCTTGAAAAACAATG...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGGTCTCTGTGGAAATCTaGGAGAAATTGGCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRVSVEI*EKLAES
Trigger: GCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGAC...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGAGTGAATGTCAGGCAGTaGCATCCAAGTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGVNVRQ*HPSFCM
Trigger: CATGCAGAAACTTGGATGTCACTGCCTGACATTCAC...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGACCTTATCGATGAGGTaGACCACCCCGTTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWTLSMR*TTPLVA
Trigger: TGCAACCAACGGGGTGGTGCACCTCATCGATAAGGT...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR GCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTCCACCTCCAGTGTCGTaGCCTCCAGGGTCTCTACAG +
Preference number: 4 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCPPPVS*PPGSLQ
Trigger: CTGTAGAGACCCTGGAGGGCACGACACTGGAGGTGG...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGCATCTCCCAAGAGTCTaGTCCGTTCTCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWHLPRV*SVLLVA
Trigger: TGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATG...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGCTGTTGGCTGGAGGCTaGAGAACATTGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRLLAGG*RTLVMT
Trigger: TGTCATCACCAATGTTCTGCAGCCTCCAGCCAACAG...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR GCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTAAATTGGCGGAGAGCTaGCGTGGTGCATTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFKLAES*RGAFLL
Trigger: CAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTT...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTACACATCTCATTATGGTaGGGCCCATGTACATTAAAG +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVHISLW*GPCTLK
Trigger: CTTTAATGTACATGGGCCGCACCATAATGAGATGTG...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTACCATTTCTCCAGCTGTaGAAGGGCTTTACAAAAACT +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVPFLQL*KGFTKT
Trigger: AGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGG...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACACAGCTGAGTGGTGGTaGATCCAACGACTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNTAEWW*IQRLPG
Trigger: CCCTGGGAGTCGTTGGATCCACCACCACTCAGCTGT...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp GCTGATGCTTGTTTGAAGATCTCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTAGTGGATCACCCCGTTaGTGGCTAGGATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: ADACLKISSAESASSSPLSGSPR*WLGCLY
Trigger: ATAAAGACATCCTAGCCACCAACGGGGTGATCCACT...AAGAGGGGATGAACTTGCAGACTCTGCGCTTGAGATCTTCAAACAAGCATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGATGTATGGGCATCAATTaGAGGGGTTCCATCTTTGAA +
Preference number: 4 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRCMGIN*RGSIFE
Trigger: TTCAAAGATGGAACCCCTCCAATTGATGCCCATACA...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000514554.5
CDS-3UTR CCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVSKFLV*ASIGGV
Trigger: AACCCCTCCAATTGATGCCCATACAAGGAATTTGCT...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTACTTAGAGGCCAGCTaGTCTTTAATTATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSYLEAS*SLIMWF
Trigger: GAACCACATAATTAAAGACCAGCTGGCCTCTAAGTA...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp GAAGATACAGCAGAAGAGAGAAGGCACCTTTTGGACCAAGGAGGGCTGTATTTTTCCAGGGTCTGTCCATaGTACAGATACTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: EDTAEERRHLLDQGGLYFSRVCP*YRYLEA
Trigger: GGCCTCTAAGTATCTGTACCATGGACAGACCCTGGA...AAAATACAGCCCTCCTTGGTCCAAAAGGTGCCTTCTCTCTTCTGCTGTATCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp ACCAGCATGCTAAAGCGATTGTCTCCCTTCAGGACATCCATGACAGTCCCCATTGGTATTTCAGGATGTTaGCAAGTTCCTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: TSMLKRLSPFRTSMTVPIGISGC*QVPWHL
Trigger: GAGATGCCAAGGAACTTGCCAACATCCTGAAATACC...AATGGGGACTGTCATGGATGTCCTGAAGGGAGACAATCGCTTTAGCATGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGGCTCACATCTCATTATaGTGCGGCCCATGTACATTA +
Preference number: 4 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVAHISL*CGPCTL
Trigger: TAATGTACATGGGCCGCACCATAATGAGATGTGAGC...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGAAGTCAATTCCACATTTaGGATAGGTCCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRSQFHI*DRSSLE
Trigger: TTCCAGAGAGGACCTATCCCAAATGTGGAATTGACT...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAAGTCAATTCCACATTTaGGATAGGTCCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CGNLREIGGELPWCIPPVSQFHI*DRSSLE
Trigger: TTCCAGAGAGGACCTATCCCAAATGTGGAATTGACT...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTCAAAGCACATGTTCATaGCCACAAATCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLQSTCS*PQICPS
Trigger: GCTGGGGCAGATTTGTGGTCATGAACATGTGCTTTG...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508076.5
CDS-3UTR GCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTCATCTCCCAAGAGTCTaGTCCGTTCTCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFHLPRV*SVLLVA
Trigger: TGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATG...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGACTGTTGGCTGGAGGCTaGAGAACATTGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGLLAGG*RTLVMT
Trigger: TGTCATCACCAATGTTCTGCAGCCTCCAGCCAACAG...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR GCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGCACATCTCATTATGGTaGGGCCCATGTACATTAAAG +
Preference number: 4 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVHISLW*GPCTLK
Trigger: CTTTAATGTACATGGGCCGCACCATAATGAGATGTG...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGCCATTTCTCCAGCTGTaGAAGGGCTTTACAAAAACT +
Preference number: 4 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVPFLQL*KGFTKT
Trigger: AGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGG...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CAATACAGGTTGGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAGAAAAAGAGGTCTCTCAGGGCTTCTaGGTCGCCCAGGATACGGTT +
Preference number: 4 (lower is better)
Translates to: QYRLDNCVVYSQRPPEKEVSQGF*VAQDTV
Trigger: AACCGTATCCTGGGCGACCCAGAAGCCCTGAGAGAC...CTCTTTTTCTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGGGATCACCCCGTTGGTaGCTAGGATGTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWGSPRW*LGCLYW
Trigger: CCAATAAAGACATCCTAGCCACCAACGGGGTGATCC...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTCCAGGGTCTGTCCATaGTACAGATACTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTSRVCP*YRYLEA
Trigger: GGCCTCTAAGTATCTGTACCATGGACAGACCCTGGA...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CAGGATTTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCAGGGTCTGTCCATaGTACAGATACTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: QDFITNVVFQDVGKFLGISRVCP*YRYLEA
Trigger: GGCCTCTAAGTATCTGTACCATGGACAGACCCTGGA...GATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAAATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCATTTCATCACCAATGTaGTATTTCAGGATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSISSPM*YFRMLA
Trigger: TGCCAACATCCTGAAATACCACATTGGTGATGAAAT...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTTCCAGCTTGTCACCTTaGAGAGACTTTAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFSSLSP*RDFSRT
Trigger: GGTGCGGCTAAAGTCTCTCCAAGGTGACAAGCTGGA...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGACATTGGTGATGACATaGACCACGCCATTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWTLVMT*TTPFVA
Trigger: GGCCACAAATGGCGTGGTCCATGTCATCACCAATGT...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAACATTGGTGATGACATaGACCACGCCATTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FITNVVFQDVGKFLGISQTLVMT*TTPFVA
Trigger: GGCCACAAATGGCGTGGTCCATGTCATCACCAATGT...TTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTACATTGGTGATGACATaGACCACGCCATTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTTLVMT*TTPFVA
Trigger: GGCCACAAATGGCGTGGTCCATGTCATCACCAATGT...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTCTGAGGTCTGTTGGCTaGAGGCTGCAGAACATTGGT +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFLRSVG*RLQNIG
Trigger: ACCAATGTTCTGCAGCCTCCAGCCAACAGACCTCAG...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTTTTCCTGAGGTCTGTTaGCTGGAGGCTGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLFPEVC*LEAAEH
Trigger: ATGTTCTGCAGCCTCCAGCCAACAGACCTCAGGAAA...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTAAATCTGAGAGAAATTaGCGGAGAGCTGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLKSERN*RRAAVV
Trigger: CACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTT...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp GTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCTGGTCTTTAATTAGCTACCAGCATGCTTaGTTTTCATGCCCTCCGTAT +
Preference number: 4 (lower is better)
Translates to: VSRVCPWYRYLEASWSLISYQHA*FSCPPY
Trigger: ATACGGAGGGCATGAAAACCAAGCATGCTGGTAGCT...AATTAAAGACCAGCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
3UTR CAA 72 bp TCAAAGGTGTCCTCGATCTCAATGATCTGCTGGATGTaGTTGGTGATGGTGGAGATGACCTTATCGATGAGG +
Preference number: 4 (lower is better)
Translates to: SKVSSISMICWM*LVMVEMTLSMR
Trigger: CCTCATCGATAAGGTCATCTCCACCATCACCAACAACATCCAGCAGATCATTGAGATCGAGGACACCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR TCA 90 bp GGAGGGCTGTATTTTAGTTTAGGGGGCTTCTCTTCTCATAAGCTCAGAAAGAGTTGGCTGAGTCTGGGATaGGTAGCTCATCAATGTAGT +
Preference number: 4 (lower is better)
Translates to: GGLYFSLGGFSSHKLRKSWLSLG*VAHQCS
Trigger: ACTACATTGATGAGCTACTCATCCCAGACTCAGCCA...ACTCTTTCTGAGCTTATGAGAAGAGAAGCCCCCTAAACTAAAATACAGCCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR TCA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTAGCCCTGGAAAACGCTaGTGCTTGTTTGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTSPGKR*CLFEDL
Trigger: GAGATCTTCAAACAAGCATCAGCGTTTTCCAGGGCT...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR GCA 90 bp AGAGGCCAGCTGGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATGGGCTTCCTTTGGTACCACTaGTTGCAGTTGGTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: RGQLVFNYVVPKQIPCMGFLWYH*LQLVKY
Trigger: GTACTTCACCAACTGCAAGCAGTGGTACCAAAGGAA...GCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACCATCTCCCAAGAGTCTaGTCCGTTCTCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNHLPRV*SVLLVA
Trigger: TGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATG...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTAAATTGGCGGAGAGCTaGCGTGGTGCATTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCKLAES*RGAFLL
Trigger: CAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTT...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCGCTGACTTCAAGATGTaGTTGTTCAGCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLADFKM*LFSRSL
Trigger: GAGAGACCTGCTGAACAACCACATCTTGAAGTCAGC...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGAGCTGACTTCAAGATGTaGTTGTTCAGCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGADFKM*LFSRSL
Trigger: GAGAGACCTGCTGAACAACCACATCTTGAAGTCAGC...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCAGTGGATCACCCCGTTaGTGGCTAGGATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLSGSPR*WLGCLY
Trigger: ATAAAGACATCCTAGCCACCAACGGGGTGATCCACT...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGGGAAGGCTTCATTTGTaGGAGCAAAGACTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRGRLHL*EQRLCR
Trigger: TCTACACAGTCTTTGCTCCCACAAATGAAGCCTTCC...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TATTCTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTAGCCAAATGGTGCTaGTTGGTCCCAGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: YSQRPPEKEIPILLQDLILAKWC*LVPGKS
Trigger: GCTCTTGCCTGGGACCAACCAGCACCATTTGGCTAA...AATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
3UTR CAA 72 bp AACAAAGAAGATACAGCAGAAGAGAGAAGGCACCTTTaGGACCAAGGAGGGCTGTATTTTAGTTTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: NKEDTAEERRHL*DQGGLYFSLGG
Trigger: GCCCCCTAAACTAAAATACAGCCCTCCTTGGTCCAAAAGGTGCCTTCTCTCTTCTGCTGTATCTTCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR TCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGTTCAGCACACATAGCTaGCTTCAAGATGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRFSTHS*LQDVVV
Trigger: AACAACCACATCTTGAAGTCAGCTATGTGTGCTGAA...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTACGCTGATGCTTGTTTaGAGATCTCAAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFTLMLV*RSQAQS
Trigger: ACTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGT...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR GCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGTGCCAATAACCTTCTaGACAGCACACACGTTGGGG +
Preference number: 4 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCVPITF*TAHTLG
Trigger: CCCCAACGTGTGTGCTGTGCAGAAGGTTATTGGCAC...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR GCA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGATGCAGCTGTTCTCAATaGAGAGGCTATTACGATAAA +
Preference number: 4 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGCSCSQ*RGYYDK
Trigger: TTTATCGTAATAGCCTCTGCATTGAGAACAGCTGCA...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACCTCAAGCGCAGAGTCTaGAAGTTCATCCCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNLKRRV*KFIPSF
Trigger: GAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGAG...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR GCA 90 bp TCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAGCACATCTCATTATGGTaGGGCCCATGTACATTAAAG +
Preference number: 4 (lower is better)
Translates to: SSPMWYFRMLASSLASPKHISLW*GPCTLK
Trigger: CTTTAATGTACATGGGCCGCACCATAATGAGATGTG...CTTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR GCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTATCCAAGTTTCTGCATaGAGTGGGTTAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLIQVSA*SGLTAM
Trigger: CATGGCTGTTAACCCACTGCATGCAGAAACTTGGAT...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAATGGATGTTGGAATTCTaGTACATAGAGGTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: FITNVVFQDVGKFLGISQWMLEF*YIEVRV
Trigger: GACCCTCACCTCTATGTACCAGAATTCCAACATCCA...TTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CCA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTAGGATCACCCCGTTGGTaGCTAGGATGTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: QRPPEKEIPILLQDLILLGSPRW*LGCLYW
Trigger: CCAATAAAGACATCCTAGCCACCAACGGGGTGATCC...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp CTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTAAAGGTCAATGGCTGTaGACACATCAGACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LKGLQKKRFQSFCRISFCKGQWL*THQTLQ
Trigger: CTGCAGAGTCTGATGTGTCCACAGCCATTGACCTTT...ACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRSKFLV*ASIGGV
Trigger: AACCCCTCCAATTGATGCCCATACAAGGAATTTGCT...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAGAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SSPMWYFRMLASSLASPKSKFLV*ASIGGV
Trigger: AACCCCTCCAATTGATGCCCATACAAGGAATTTGCT...CTTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGAGGAAGGCTTCATTTGTaGGAGCAAAGACTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGGRLHL*EQRLCR
Trigger: TCTACACAGTCTTTGCTCCCACAAATGAAGCCTTCC...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGAGGTATTTCAGGATGTTaGCAAGTTCCTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGGISGC*QVPWHL
Trigger: GAGATGCCAAGGAACTTGCCAACATCCTGAAATACC...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CAGGATTTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCGGTATTTCAGGATGTTaGCAAGTTCCTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: QDFITNVVFQDVGKFLGIGISGC*QVPWHL
Trigger: GAGATGCCAAGGAACTTGCCAACATCCTGAAATACC...GATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAAATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CCA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGATTTCATCACCAATGTaGTATTTCAGGATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVISSPM*YFRMLA
Trigger: TGCCAACATCCTGAAATACCACATTGGTGATGAAAT...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACACATTGGTGATGACATaGACCACGCCATTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNTLVMT*TTPFVA
Trigger: GGCCACAAATGGCGTGGTCCATGTCATCACCAATGT...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTCTGAGGTCTGTTGGCTaGAGGCTGCAGAACATTGGT +
Preference number: 4 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCLRSVG*RLQNIG
Trigger: ACCAATGTTCTGCAGCCTCCAGCCAACAGACCTCAG...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATAAGTCGCACAGACCTCTaGGAAGCCCTGGAAAACGCT +
Preference number: 4 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYISRTDL*EALENA
Trigger: AGCGTTTTCCAGGGCTTCCCAGAGGTCTGTGCGACT...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000508076.5
CDS-3UTR CCA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCGCTCACATCTCATTATaGTGCGGCCCATGTACATTA +
Preference number: 4 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLAHISL*CGPCTL
Trigger: TAATGTACATGGGCCGCACCATAATGAGATGTGAGC...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGGCTCACATCTCATTATaGTGCGGCCCATGTACATTA +
Preference number: 4 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWAHISL*CGPCTL
Trigger: TAATGTACATGGGCCGCACCATAATGAGATGTGAGC...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTCCTTTTCCAGGGACTTaGCATAGGCAGTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFPFPGT*HRQSIP
Trigger: TGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGG...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CAGGATTTCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTGTATGGGCATCAATTaGAGGGGTTCCATCTACAAG +
Preference number: 4 (lower is better)
Translates to: QDFITNVVFQDVGKFLGICMGIN*RGSIYK
Trigger: CTTGTAGATGGAACCCCTCCAATTGATGCCCATACA...GATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR TCA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTTCAGCACACATAGCTaGCTTCAAGATGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTFSTHS*LQDVVV
Trigger: AACAACCACATCTTGAAGTCAGCTATGTGTGCTGAA...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACGAGGGGTTCCATCTTTaGATACAGAATTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNEGFHL*IQNSGE
Trigger: CTCCCCTGAATTCTGTATTCAAAGATGGAACCCCTC...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTCATTGTTTTTCAAGCTaGCTTCCAGCTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTHCFSS*LPACHL
Trigger: AAGGTGACAAGCTGGAAGTCAGCTTGAAAAACAATG...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACACGCTGATGCTTGTTTaGAGATCTCAAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNTLMLV*RSQAQS
Trigger: ACTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGT...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR GCA 90 bp ATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAGAGTGCAGCTGTTCTCAATaGAGAGGCTATTACGATAAA +
Preference number: 4 (lower is better)
Translates to: ITNVVFQDVGKFLGISQECSCSQ*RGYYDK
Trigger: TTTATCGTAATAGCCTCTGCATTGAGAACAGCTGCA...CTCTTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR GCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTCCATTTCTCCAGCTGTaGAAGGGCTTTACAAAAACT +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLPFLQL*KGFTKT
Trigger: AGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGG...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp CTTCACAATACAGGTTGGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAGAAATCTTTAGCCAAATGGTaGTGGTTGGTCCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LHNTGWIIVWFILKGLQKSLAKW*WLVPGK
Trigger: CTTGCCTGGGACCAACCAGCACCATTTGGCTAAAGA...TTTCTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATTGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTTGGATGTTGGAATTCTaGTACATAGAGGTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFWMLEF*YIEVRV
Trigger: GACCCTCACCTCTATGTACCAGAATTCCAACATCCA...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CCA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTAGCTGACTTCAAGATGTaGTTGTTCAGCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QRPPEKEIPILLQDLILLADFKM*LFSRSL
Trigger: GAGAGACCTGCTGAACAACCACATCTTGAAGTCAGC...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTAAGTGGATCACCCCGTTaGTGGCTAGGATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: QRPPEKEIPILLQDLILLSGSPR*WLGCLY
Trigger: ATAAAGACATCCTAGCCACCAACGGGGTGATCCACT...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp GGAGGGCTGTATTTTAGTTTAGGGGGCTTCTCTTCTCATAAGCTCAGAAAGAGTAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GGLYFSLGGFSSHKLRKSSKFLV*ASIGGV
Trigger: AACCCCTCCAATTGATGCCCATACAAGGAATTTGCT...ACTCTTTCTGAGCTTATGAGAAGAGAAGCCCCCTAAACTAAAATACAGCCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp CACCCAGCAAAAATGCTAAGCTCTAAAGCGATTGTCTCCCTTCAGGACATCCATTACTTAGAGGCCAGCTaGTCTTTAATTATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: HPAKMLSSKAIVSLQDIHYLEAS*SLIMWF
Trigger: GAACCACATAATTAAAGACCAGCTGGCCTCTAAGTA...ATGGATGTCCTGAAGGGAGACAATCGCTTTAGAGCTTAGCATTTTTGCTGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR CCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTACCTCTGGGAAGCCCTaGAAAACGCTGATGCTTGTT +
Preference number: 4 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCTSGKP*KTLMLV
Trigger: AACAAGCATCAGCGTTTTCCAGGGCTTCCCAGAGGT...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CCA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCAGTCAATTCCACATTTaGGATAGGTCCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLSQFHI*DRSSLE
Trigger: TTCCAGAGAGGACCTATCCCAAATGTGGAATTGACT...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGTGTTGGCAAGTTCCTTaGCATCTCAATCTGTCTAAT +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRCWQVP*HLNLSN
Trigger: ATTAGACAGATTGAGATGCCAAGGAACTTGCCAACA...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508076.5
CDS-3UTR CCA 90 bp GAAGATACAGCAGAAGAGAGAAGGCACCTTTTGGACCAAGGAGGGCTGTATTTTGGTTGGATAATTGTGTaGTTTATTCTCAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: EDTAEERRHLLDQGGLYFGWIIV*FILKGL
Trigger: GAGGCCTTTGAGAATAAACCACACAATTATCCAACC...AAAATACAGCCCTCCTTGGTCCAAAAGGTGCCTTCTCTCTTCTGCTGTATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTAAGAGAAGGCACCTTTTaGACCAAGGAGGGCTGTATT +
Preference number: 4 (lower is better)
Translates to: QRPPEKEIPILLQDLILLREGTF*TKEGCI
Trigger: AATACAGCCCTCCTTGGTCCAAAAGGTGCCTTCTCT...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR TCA 90 bp CTTCACAATACAGGTTGGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAGAAAGAGGGGTTCCATCTTTaGATACAGAATTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LHNTGWIIVWFILKGLQKEGFHL*IQNSGE
Trigger: CTCCCCTGAATTCTGTATTCAAAGATGGAACCCCTC...TTTCTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATTGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR GCA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTCACATCTCATTATGGTaGGGCCCATGTACATTAAAG +
Preference number: 4 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFHISLW*GPCTLK
Trigger: CTTTAATGTACATGGGCCGCACCATAATGAGATGTG...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp AATACAGGTTGGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAGAAAAAGAGAGCCAAAAGCGTGTACTaGCCGTTACCTTCAAGCATC +
Preference number: 4 (lower is better)
Translates to: NTGWIIVWFILKGLQKKRAKSVY*PLPSSI
Trigger: GATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGC...TCTCTTTTTCTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp CTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTGTATGGGCATCAATTaGAGGGGTTCCATCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LKGLQKKRFQSFCRISFCCMGIN*RGSIFE
Trigger: TTCAAAGATGGAACCCCTCCAATTGATGCCCATACA...ACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp CACCCAGCAAAAATGCTAAGCTCTAAAGCGATTGTCTCCCTTCAGGACATCCATATTTCATCACCAATGTaGTATTTCAGGATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HPAKMLSSKAIVSLQDIHISSPM*YFRMLA
Trigger: TGCCAACATCCTGAAATACCACATTGGTGATGAAAT...ATGGATGTCCTGAAGGGAGACAATCGCTTTAGAGCTTAGCATTTTTGCTGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR TCA 90 bp TATTCTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTCAGCACACATAGCTaGCTTCAAGATGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: YSQRPPEKEIPILLQDLIFSTHS*LQDVVV
Trigger: AACAACCACATCTTGAAGTCAGCTATGTGTGCTGAA...AATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR TCA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATATGGCTGAGTCTGGGATaGGTAGCTCATCAATGTAGT +
Preference number: 4 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYIWLSLG*VAHQCS
Trigger: ACTACATTGATGAGCTACTCATCCCAGACTCAGCCA...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000514554.5
CDS-3UTR TCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACCATTGTTTTTCAAGCTaGCTTCCAGCTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNHCFSS*LPACHL
Trigger: AAGGTGACAAGCTGGAAGTCAGCTTGAAAAACAATG...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR TCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTCAACAGGCTCCTTGTTaGCACTCACCACATTGTTTT +
Preference number: 4 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCQQAPC*HSPHCF
Trigger: AAAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTG...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR GCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTATCCAAGTTTCTGCATaGAGTGGGTTAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCIQVSA*SGLTAM
Trigger: CATGGCTGTTAACCCACTGCATGCAGAAACTTGGAT...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATAAAAGGTCAATGGCTGTaGACACATCAGACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYIKGQWL*THQTLQ
Trigger: CTGCAGAGTCTGATGTGTCCACAGCCATTGACCTTT...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000514554.5
CDS-3UTR CCA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGTGGTCTTTAATTATGTaGTTCCGAAGCAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRWSLIM*FRSKFL
Trigger: AAGGAATTTGCTTCGGAACCACATAATTAAAGACCA...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATACCTTTTCCAGGGACTTaGCATAGGCAGTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYIPFPGT*HRQSIP
Trigger: TGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGG...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATACCACAGATTTTCCTTTaGTACCACTGCTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYIPQIFL*YHCLQL
Trigger: CAACTGCAAGCAGTGGTACCAAAGGAAAATCTGTGG...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CCA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTTGGTCTTTAATTATGTaGTTCCGAAGCAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLWSLIM*FRSKFL
Trigger: AAGGAATTTGCTTCGGAACCACATAATTAAAGACCA...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TATTCTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTACTTAGAGGCCAGCTaGTCTTTAATTATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: YSQRPPEKEIPILLQDLIYLEAS*SLIMWF
Trigger: GAACCACATAATTAAAGACCAGCTGGCCTCTAAGTA...AATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR TCA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTACCAGGTGTTAATTCCTaGATTCAAGAAGGACTTATT +
Preference number: 4 (lower is better)
Translates to: QRPPEKEIPILLQDLILLPGVNS*IQEGLI
Trigger: AATAAGTCCTTCTTGAATTCAGGAATTAACACCTGG...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR GCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTTGCAGCTGTTCTCAATaGAGAGGCTATTACGATAAA +
Preference number: 4 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCCSCSQ*RGYYDK
Trigger: TTTATCGTAATAGCCTCTGCATTGAGAACAGCTGCA...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTTACTTAGAGGCCAGCTaGTCTTTAATTATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCYLEAS*SLIMWF
Trigger: GAACCACATAATTAAAGACCAGCTGGCCTCTAAGTA...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CCA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACATTTCATCACCAATGTaGTATTTCAGGATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNISSPM*YFRMLA
Trigger: TGCCAACATCCTGAAATACCACATTGGTGATGAAAT...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CCA 90 bp TATTCTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTGGTCTTTAATTATGTaGTTCCGAAGCAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: YSQRPPEKEIPILLQDLIWSLIM*FRSKFL
Trigger: AAGGAATTTGCTTCGGAACCACATAATTAAAGACCA...AATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CCA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATAATTACAAACACACCATaGCTCTGTCACAATAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYIITNTP*LCHNRE
Trigger: TTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAAT...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS CCA 90 bp GGGCCAGAGCCAGGGCGAGAGCCAGCAGCCGCACGAAGAGCGCCATaGAGCGGGACGACGCGCACCGAGCGAGCTAGCGACCGACGGGCA +
Preference number: 5 (lower is better)
Translates to: GPEPGREPAAARRAP*SGTTRTERASDRRA
Trigger: TGCCCGTCGGTCGCTAGCTCGCTCGGTGCGCGTCGTCCCGCTCCATGGCGCTCTTCGTGCGGCTGCTGGCTCTCGCCCTGGCTCTGGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
CDS GCA 90 bp TCTGCACAGCACACACGTTGGGGCCGTGCTGGCGGCCCCGGAGCCTaGTGTGCTGCAGCACCAGCTGGTAGGGCGACTTGGCGGGACCCG +
Preference number: 5 (lower is better)
Translates to: SAQHTRWGRAGGPGA*CAAAPAGRATWRDP
Trigger: CGGGTCCCGCCAAGTCGCCCTACCAGCTGGTGCTGCAGCACAGCAGGCTCCGGGGCCGCCAGCACGGCCCCAACGTGTGTGCTGTGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
CDS-3UTR CAA 90 bp GTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTGTTCAGGTGCACCACCCCGTaGGTTGCATGGTGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: VNRVPYLPLLSWAAMQLFRCTTP*VAWWSA
Trigger: AGCCGACCACCATGCAACCAACGGGGTGGTGCACCT...GAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp AGTTCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGCCGTACCTCCCCCTCTaGTCGTGGGCCGCGATGCAG +
Preference number: 5 (lower is better)
Translates to: SSLASPKSLLRSLGGRARPYLPL*SWAAMQ
Trigger: CTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGG...CCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CAA 90 bp TTGCCGCCCAGAGTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCTGCACAGCACACACGTaGGGGCCGTGCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LPPRVSRVCPWYRYLEASCTAHT*GPCWRP
Trigger: GGGCCGCCAGCACGGCCCCAACGTGTGTGCTGTGCA...GCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAACTCTGGGCGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS GCA 90 bp GAGGAGCTTAGACAGCGAAGCTCCCAGCTAACAGCCATCCACACCTaGGAGGCCTGTCAGTGCCAGCCAGCCCCAGCGTGTTTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: EELRQRSSQLTAIHT*EACQCQPAPACLSL
Trigger: GAGAGACAAACACGCTGGGGCTGGCTGGCACTGACAGGCCTCGCAGGTGTGGATGGCTGTTAGCTGGGAGCTTCGCTGTCTAAGCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS-3UTR CAA 90 bp CCCTCTTGTCGTGGGCCGCGATGCAGCTGTTCTCAATGCAGAGGCTATTACGATCCGTACCTCCCCCTCTaGTCGTGGGCCGCGATGCAG +
Preference number: 5 (lower is better)
Translates to: PSCRGPRCSCSQCRGYYDPYLPL*SWAAMQ
Trigger: CTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGG...ATCGTAATAGCCTCTGCATTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS GCA 90 bp CGAAGCTCCCAGCTAACAGCCATCCACACCTGCGAGGCCTGTCAGTaGCAGCCAGCCCCAGCGTGTTTGTCTCTCTGTGTTGGAGATCTC +
Preference number: 5 (lower is better)
Translates to: RSSQLTAIHTCEACQ*QPAPACLSLCVGDL
Trigger: GAGATCTCCAACACAGAGAGACAAACACGCTGGGGCTGGCTGGCACTGACAGGCCTCGCAGGTGTGGATGGCTGTTAGCTGGGAGCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS TCA 90 bp CTGCGGCCCCAGAGCAGTCAGAAGCCAGGCTGGAAATCAGACCCTTaGCTTCTGTGTCCACACTGGTGGCTTCTCTGCTGTTCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: LRPQSSQKPGWKSDP*LLCPHWWLLCCSGL
Trigger: GAGCCCAGAACAGCAGAGAAGCCACCAGTGTGGACACAGAAGTCAAGGGTCTGATTTCCAGCCTGGCTTCTGACTGCTCTGGGGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp ACCTCACCCACTGGCCTCTCCCTTGCCCTTCCTGCCCTGAGCCTTTaGTATTACTCTCCCCTCTACTGGGTGTGCTCTTGCCCCAGCATT +
Preference number: 5 (lower is better)
Translates to: TSPTGLSLALPALSL*YYSPLYWVCSCPSI
Trigger: AATGCTGGGGCAAGAGCACACCCAGTAGAGGGGAGAGTAATAGCAAAGGCTCAGGGCAGGAAGGGCAAGGGAGAGGCCAGTGGGTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp GGCCTGTCAGTGCCAGCCAGCCCCAGCGTGTTTGTCTCTCTGTGTTaGAGATCTCTAGGGAGGGTCCGCCTCACTCCCACTTGTATCCTT +
Preference number: 5 (lower is better)
Translates to: GLSVPASPSVFVSLC*RSLGRVRLTPTCIL
Trigger: AAGGATACAAGTGGGAGTGAGGCGGACCCTCCCTAGAGATCTCCAACACAGAGAGACAAACACGCTGGGGCTGGCTGGCACTGACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS-3UTR CAA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACAAGGTGCACCACCCCGTaGGTTGCATGGTGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTRCTTP*VAWWSA
Trigger: AGCCGACCACCATGCAACCAACGGGGTGGTGCACCT...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp GACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGACTGGATGGCAGCTACATTGCCGAGGCCGGCTaGTCTGAAAAGGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: DSFPVEGLRQSCRLDGSYIAEAG*SEKVNG
Trigger: GCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAAT...GTAGCTGCCATCCAGTCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CAA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTACCGTACCTCCCCCTCTaGTCGTGGGCCGCGATGCAG +
Preference number: 5 (lower is better)
Translates to: CGNLREIGGELPWCIPPVPYLPL*SWAAMQ
Trigger: CTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGG...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACAGTCTGCTCCGTTCTCTaGGTGGCAGGGCTCGGAAGG +
Preference number: 5 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTVCSVL*VAGLGR
Trigger: CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGAC...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS TCA 90 bp GTCAACTTGGCACACTTCCCACCCCATCTCACCGCCAGACAAAGGTaGGTCTGTCTGCTGTGCCTACACTCATGGCTTGCAGCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: VNLAHFPPHLTARQR*VCLLCLHSWLAALL
Trigger: GAGGAGGGCTGCAAGCCATGAGTGTAGGCACAGCAGACAGACTCACCTTTGTCTGGCGGTGAGATGGGGTGGGAAGTGTGCCAAGTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp TGCTTGCAGTTGGTGAAGTACTTCCTATTAGTGCCAATAACCTTCTaGACAGCACACACGTTGGGGCCGTGCTGGCGGCCCCGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: CLQLVKYFLLVPITF*TAHTLGPCWRPRSL
Trigger: CAGGCTCCGGGGCCGCCAGCACGGCCCCAACGTGTGTGCTGTGCAGAAGGTTATTGGCACTAATAGGAAGTACTTCACCAACTGCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
CDS GCA 90 bp TCTGGGAAACATGTTCTCAGCCCTCGTGAGCCCAGGCCTCTCTTCTaGCAAGGATCCCTCCTCAGGAAGCACCCAAGTCTTTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SGKHVLSPREPRPLF*QGSLLRKHPSLSAQ
Trigger: CTGGGCAGAAAGACTTGGGTGCTTCCTGAGGAGGGATCCTTGGCAGAAGAGAGGCCTGGGCTCACGAGGGCTGAGAACATGTTTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506699.5
ENST00000515433.1
CDS GCA 90 bp TATTCTAGTACCCCATGTGGGAACTGCCACCTCTGGAAGCCACAGTaGAGGTCCAGGGCTCAGAGGACACTGTGCTGCTGCAGCCACACA +
Preference number: 5 (lower is better)
Translates to: YSSTPCGNCHLWKPQ*RSRAQRTLCCCSHT
Trigger: TGTGTGGCTGCAGCAGCACAGTGTCCTCTGAGCCCTGGACCTGCACTGTGGCTTCCAGAGGTGGCAGTTCCCACATGGGGTACTAGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp GGTTTCCTGCTGCTCCCAGGATGGAGATGCACTCTTTCCCAGGTCTaGAAGTCCTGGAGGATTGGGCCTGGCCACTCTGGCCTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GFLLLPGWRCTLSQV*KSWRIGPGHSGLVF
Trigger: AAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGACCTGGGAAAGAGTGCATCTCCATCCTGGGAGCAGCAGGAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp CACACTTCCCACCCCATCTCACCGCCAGACAAAGGTGAGTCTGTCTaGTGTGCCTACACTCATGGCTTGCAGCCCTCCTCACACTGTCAC +
Preference number: 5 (lower is better)
Translates to: HTSHPISPPDKGESV*CAYTHGLQPSSHCH
Trigger: GTGACAGTGTGAGGAGGGCTGCAAGCCATGAGTGTAGGCACAGCAGACAGACTCACCTTTGTCTGGCGGTGAGATGGGGTGGGAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp GAAGATGGAGTGCTCCCTGAAGACTCTGGCACTCCCCACAGAAGATaGACACACAGCTTCACTGGTTCCCCGCAAGGGCTCGAGGCTTTC +
Preference number: 5 (lower is better)
Translates to: EDGVLPEDSGTPHRR*THSFTGSPQGLEAF
Trigger: GAAAGCCTCGAGCCCTTGCGGGGAACCAGTGAAGCTGTGTGTGCATCTTCTGTGGGGAGTGCCAGAGTCTTCAGGGAGCACTCCATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp CAGGCCTCAGCTTCTCCGTGCGGTCCGTGTACAGCTGAGTGGTGGTaGATCCAACGACTCCCAGGGTCTCGTAAAGGTTTGAGAGTGGTA +
Preference number: 5 (lower is better)
Translates to: QASASPCGPCTAEWW*IQRLPGSRKGLRVV
Trigger: TACCACTCTCAAACCTTTACGAGACCCTGGGAGTCGTTGGATCCACCACCACTCAGCTGTACACGGACCGCACGGAGAAGCTGAGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
ENST00000515433.1
CDS CCA 90 bp TCTCAGGCCTCAGCTTCTCCGTGCGGTCCGTGTACAGCTGAGTGGTaGTGGATCCAACGACTCCCAGGGTCTCGTAAAGGTTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: SQASASPCGPCTAEW*WIQRLPGSRKGLRV
Trigger: CACTCTCAAACCTTTACGAGACCCTGGGAGTCGTTGGATCCACCACCACTCAGCTGTACACGGACCGCACGGAGAAGCTGAGGCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
ENST00000515433.1
CDS CCA 90 bp CCATCTCAGGCCTCAGCTTCTCCGTGCGGTCCGTGTACAGCTGAGTaGTGGTGGATCCAACGACTCCCAGGGTCTCGTAAAGGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: PSQASASPCGPCTAE*WWIQRLPGSRKGLR
Trigger: TCTCAAACCTTTACGAGACCCTGGGAGTCGTTGGATCCACCACCACTCAGCTGTACACGGACCGCACGGAGAAGCTGAGGCCTGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
ENST00000515433.1
CDS CCA 90 bp CTGCTCCCAGGATGGAGATGCACTCTTTCCCAGGTCTGCAAGTCCTaGAGGATTGGGCCTGGCCACTCTGGCCTTGTCTTTGCCCATTGT +
Preference number: 5 (lower is better)
Translates to: LLPGWRCTLSQVCKS*RIGPGHSGLVFAHC
Trigger: ACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGACCTGGGAAAGAGTGCATCTCCATCCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS-3UTR CAA 90 bp CTTGTCGTGGGCCGCGATGCAGCTGTTCTCAATGCAGAGGCTATTACGATAAACGAGGCCCAGGCCTCGTaGCTAGGGGCGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LVVGRDAAVLNAEAITINEAQAS*LGAKMV
Trigger: CACCATCTTCGCCCCTAGCAACGAGGCCTGGGCCTC...GTTTATCGTAATAGCCTCTGCATTGAGAACAGCTGCATCGCGGCCCACGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp CATCGTGAACAGGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATGCAGCTATGATCTGCTGGATGTaGTTGGTGATGGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: HREQGPVPPPLVVGRDAAMICWM*LVMVEM
Trigger: CATCTCCACCATCACCAACAACATCCAGCAGATCAT...AGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp CCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGGTCGGCAACAGGCTCCTaGTTGACACTCACCACATTG +
Preference number: 5 (lower is better)
Translates to: PWHLPRVCSVLLVAGLGRSATGS*LTLTTL
Trigger: CAATGTGGTGAGTGTCAACAAGGAGCCTGTTGCCGA...CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS TCA 90 bp CAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTTGAGCCCTaGTGCAGCCACAGCAGCCTGTGGGGAGGAGAGAAGATGGAGTGC +
Preference number: 5 (lower is better)
Translates to: QKRVLAVTFKHRVEP*CSHSSLWGGEKMEC
Trigger: GCACTCCATCTTCTCTCCTCCCCACAGGCTGCTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp GAACCTGCTCTATGTTCCCCTACAGGAGCCATCCTCTACCTCTCCTaGAGAAGAGTTCCTGCTAGGCCCCTCTTGGGAGGCAATGTGTCC +
Preference number: 5 (lower is better)
Translates to: EPALCSPTGAILYLS*RRVPARPLLGGNVS
Trigger: GGACACATTGCCTCCCAAGAGGGGCCTAGCAGGAACTCTTCTGCAGGAGAGGTAGAGGATGGCTCCTGTAGGGGAACATAGAGCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp AACCCTGACAGGGCAGCCTGCCTCCACTTCCTCCTGAGCAGTCCTTaGCAAGAGGAACATGCCTTCCCCTCCAGTTGTAAGACAAATGCC +
Preference number: 5 (lower is better)
Translates to: NPDRAACLHFLLSSP*QEEHAFPSSCKTNA
Trigger: GGCATTTGTCTTACAACTGGAGGGGAAGGCATGTTCCTCTTGGCAAGGACTGCTCAGGAGGAAGTGGAGGCAGGCTGCCCTGTCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp CCAGCCTGGCCATCTTTCATGTCCTTAACCTGCCTTTCCTCTTCCTaGCCCCAAGTCCTTGTCCCTGCTGTCCTCTCTGCTCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PAWPSFMSLTCLSSS*PQVLVPAVLSALPS
Trigger: AGAGGGAAGAGCAGAGAGGACAGCAGGGACAAGGACTTGGGGGCAGGAAGAGGAAAGGCAGGTTAAGGACATGAAAGATGGCCAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS-3UTR CAA 90 bp AGGCCTCATTGGTCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGCCTTCAAGCATCGTGTaGAGCCCTGATGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: RPHWSGPKACTGRYLQASPSSIV*SPDAAT
Trigger: TGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGG...CGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTGTCTGCTCCGTTCTCTaGGTGGCAGGGCTCGGAAGG +
Preference number: 5 (lower is better)
Translates to: NLREIGGELPWCIPPVVLVCSVL*VAGLGR
Trigger: CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGAC...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS TCA 90 bp GGACTGAGGTTCAACTGCACTGGAGGCAAGGAACATACACTGAGGTaGGATGCTGTAAGAGGAGTGCTGGGAATCGCGCGGACAGCATCC +
Preference number: 5 (lower is better)
Translates to: GLRFNCTGGKEHTLR*DAVRGVLGIARTAS
Trigger: GGATGCTGTCCGCGCGATTCCCAGCACTCCTCTTACAGCATCTCACCTCAGTGTATGTTCCTTGCCTCCAGTGCAGTTGAACCTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS TCA 90 bp ATCAAGGCAAAAACCCTGACAGGGCAGCCTGCCTCCACTTCCTCCTaGGCAGTCCTTGCCAAGAGGAACATGCCTTCCCCTCCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: IKAKTLTGQPASTSS*AVLAKRNMPSPPVV
Trigger: TACAACTGGAGGGGAAGGCATGTTCCTCTTGGCAAGGACTGCTCAGGAGGAAGTGGAGGCAGGCTGCCCTGTCAGGGTTTTTGCCTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp GAGATGACCTTATCGATGAGGTGCACCACCCCGTTGGTTGCATGGTaGTCGGCTTTCAGCAGCCGGGCACAGTTCACAGTTACAATCTGC +
Preference number: 5 (lower is better)
Translates to: EMTLSMRCTTPLVAW*SAFSSRAQFTVTIC
Trigger: GCAGATTGTAACTGTGAACTGTGCCCGGCTGCTGAAAGCCGACCACCATGCAACCAACGGGGTGGTGCACCTCATCGATAAGGTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp GTGGCTTCTCTGCTGTTCTGGGCTCCAAGAGAACATGCGTATGGTTaGAACCAGGGTCCTAGGGTGGGGACATGTGATCCCAAAGCACAC +
Preference number: 5 (lower is better)
Translates to: VASLLFWAPREHAYG*NQGPRVGTCDPKAH
Trigger: GTGTGCTTTGGGATCACATGTCCCCACCCTAGGACCCTGGTTCCAACCATACGCATGTTCTCTTGGAGCCCAGAACAGCAGAGAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp GAGATGCACTCTTTCCCAGGTCTGCAAGTCCTGGAGGATTGGGCCTaGCCACTCTGGCCTTGTCTTTGCCCATTGTATGCCCTTCACATG +
Preference number: 5 (lower is better)
Translates to: EMHSFPGLQVLEDWA*PLWPCLCPLYALHM
Trigger: CATGTGAAGGGCATACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGACCTGGGAAAGAGTGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp AGGATGGAGATGCACTCTTTCCCAGGTCTGCAAGTCCTGGAGGATTaGGCCTGGCCACTCTGGCCTTGTCTTTGCCCATTGTATGCCCTT +
Preference number: 5 (lower is better)
Translates to: RMEMHSFPGLQVLED*AWPLWPCLCPLYAL
Trigger: AAGGGCATACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGACCTGGGAAAGAGTGCATCTCCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS-3UTR CAA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTTGCACAGCACACACGTaGGGGCCGTGCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLCTAHT*GPCWRP
Trigger: GGGCCGCCAGCACGGCCCCAACGTGTGTGCTGTGCA...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp AGCAAAGACTGTGTAGACTCCTTCCCGGTTGAGGGTCTCCGTCAGTCCTGCAGAATGATCGCCTTCCCGTaGATAGTGAGCATGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SKDCVDSFPVEGLRQSCRMIAFP*IVSMSP
Trigger: CGGGGACATGCTCACTATCAACGGGAAGGCGATCAT...TCTGCAGGACTGACGGAGACCCTCAACCGGGAAGGAGTCTACACAGTCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp AGCAGGTCTCTCAGGGCTTCTGGGTCGCCCAGGATACGGTTCAAAGTCTCACTAATTGCCGAGGCCGGCTaGTCTGAAAAGGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: SRSLRASGSPRIRFKVSLIAEAG*SEKVNG
Trigger: GCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAAT...TAGTGAGACTTTGAACCGTATCCTGGGCGACCCAGAAGCCCTGAGAGACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp GCACACATAGCTGACTTCAAGATGTGGTTGTTCAGCAGGTCTCTCAGGGCTTCTGTCTGCTCCGTTCTCTaGGTGGCAGGGCTCGGAAGG +
Preference number: 5 (lower is better)
Translates to: AHIADFKMWLFSRSLRASVCSVL*VAGLGR
Trigger: CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGAC...AGAAGCCCTGAGAGACCTGCTGAACAACCACATCTTGAAGTCAGCTATGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACAGGAGGCTGCAGAACATaGGTGATGACATGGACCACG +
Preference number: 5 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTGGCRT*VMTWTT
Trigger: CGTGGTCCATGTCATCACCAATGTTCTGCAGCCTCC...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS GCA 90 bp CGCCAGACAAAGGTGAGTCTGTCTGCTGTGCCTACACTCATGGCTTaGAGCCCTCCTCACACTGTCACTCGACAGTTACTGGTAATCACG +
Preference number: 5 (lower is better)
Translates to: RQTKVSLSAVPTLMA*SPPHTVTRQLLVIT
Trigger: CGTGATTACCAGTAACTGTCGAGTGACAGTGTGAGGAGGGCTGCAAGCCATGAGTGTAGGCACAGCAGACAGACTCACCTTTGTCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp GGGCTCCAAGAGAACATGCGTATGGTTGGAACCAGGGTCCTAGGGTaGGGACATGTGATCCCAAAGCACACACAGCCTGATAGGCCATTT +
Preference number: 5 (lower is better)
Translates to: GLQENMRMVGTRVLG*GHVIPKHTQPDRPF
Trigger: AAATGGCCTATCAGGCTGTGTGTGCTTTGGGATCACATGTCCCCACCCTAGGACCCTGGTTCCAACCATACGCATGTTCTCTTGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp AGACCCTTGACTTCTGTGTCCACACTGGTGGCTTCTCTGCTGTTCTaGGCTCCAAGAGAACATGCGTATGGTTGGAACCAGGGTCCTAGG +
Preference number: 5 (lower is better)
Translates to: RPLTSVSTLVASLLF*APREHAYGWNQGPR
Trigger: CCTAGGACCCTGGTTCCAACCATACGCATGTTCTCTTGGAGCCCAGAACAGCAGAGAAGCCACCAGTGTGGACACAGAAGTCAAGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp CTTGTCTTTGCCCATTGTATGCCCTTCACATGTGACCTCACCCACTaGCCTCTCCCTTGCCCTTCCTGCCCTGAGCCTTTGCTATTACTC +
Preference number: 5 (lower is better)
Translates to: LVFAHCMPFTCDLTH*PLPCPSCPEPLLLL
Trigger: GAGTAATAGCAAAGGCTCAGGGCAGGAAGGGCAAGGGAGAGGCCAGTGGGTGAGGTCACATGTGAAGGGCATACAATGGGCAAAGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp GAAGGATCTTCTAAAGGCCTGAGTGGTTTCCTGCTGCTCCCAGGATaGAGATGCACTCTTTCCCAGGTCTGCAAGTCCTGGAGGATTGGG +
Preference number: 5 (lower is better)
Translates to: EGSSKGLSGFLLLPG*RCTLSQVCKSWRIG
Trigger: CCCAATCCTCCAGGACTTGCAGACCTGGGAAAGAGTGCATCTCCATCCTGGGAGCAGCAGGAAACCACTCAGGCCTTTAGAAGATCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS-3UTR CAA 90 bp CTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTCCTTCAAGCATCGTGTaGAGCCCTGATGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: LCGNLREIGGELPWCIPPPSSIV*SPDAAT
Trigger: TGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGG...AGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGATTCTCGAAGGCCTCATaGGTCGGGGCCAAAAGCGTG +
Preference number: 5 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRFSKAS*VGAKSV
Trigger: CACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAA...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CAA 90 bp CAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCATGATCGCCTTCCCGTaGATAGTGAGCATGTCCCCG +
Preference number: 5 (lower is better)
Translates to: QSLWKSERNWRRAAVVHSMIAFP*IVSMSP
Trigger: CGGGGACATGCTCACTATCAACGGGAAGGCGATCAT...GGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTATTGCCGAGGCCGGCTaGTCTGAAAAGGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: LCGNLREIGGELPWCIPPIAEAG*SEKVNG
Trigger: GCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAAT...AGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCCGTACCTCCCCCTCTaGTCGTGGGCCGCGATGCAG +
Preference number: 5 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLPYLPL*SWAAMQ
Trigger: CTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGG...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACTCGGCAACAGGCTCCTaGTTGACACTCACCACATTG +
Preference number: 5 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHSATGS*LTLTTL
Trigger: CAATGTGGTGAGTGTCAACAAGGAGCCTGTTGCCGA...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCGGAGGCTGCAGAACATaGGTGATGACATGGACCACG +
Preference number: 5 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSGGCRT*VMTWTT
Trigger: CGTGGTCCATGTCATCACCAATGTTCTGCAGCCTCC...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TTGCCGCCCAGAGTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCCAGCTACCAGCATGCTaGGTTTTCATGCCCTCCGTA +
Preference number: 5 (lower is better)
Translates to: LPPRVSRVCPWYRYLEASQLPAC*VFMPSV
Trigger: TACGGAGGGCATGAAAACCAAGCATGCTGGTAGCTG...GCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAACTCTGGGCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS TCA 90 bp TCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTTaGGCCCTGATGCAGCCACAGCAGCCAAATCTAAACAGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: SGPKACTGRYLQASC*ALMQPQQPNLNSKR
Trigger: CCTCTTACTGTTTAGATTTGGCTGCTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506699.5
CDS TCA 90 bp CCGCCTCACTCCCACTTGTATCCTTTGTGGTTAGGAAGTTCTCCTTaGATCAAGGCAAAAACCCTGACAGGGCAGCCTGCCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: PPHSHLYPLWLGSSP*IKAKTLTGQPASTS
Trigger: GGAAGTGGAGGCAGGCTGCCCTGTCAGGGTTTTTGCCTTGATTCAAGGAGAACTTCCTAACCACAAAGGATACAAGTGGGAGTGAGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp CCCCCGTCCCGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGATCTaGTGGATGTTGTTGGTGATGGTGGAGATGACCTTATCGATGAGG +
Preference number: 5 (lower is better)
Translates to: PPSRRVSKVSSISMI*WMLLVMVEMTLSMR
Trigger: CCTCATCGATAAGGTCATCTCCACCATCACCAACAACATCCAGCAGATCATTGAGATCGAGGACACCTTTGAGACCCTTCGGGACGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506699.5
CDS CCA 90 bp AGGACAGGGTGTCAGTTAGGGGCTGCAGACTCTGTGTTTAAGAGATaGGTCCTTGCAACTCTGGGAAACATGTTCTCAGCCCTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: RTGCQLGAADSVFKR*VLATLGNMFSALVS
Trigger: GCTCACGAGGGCTGAGAACATGTTTCCCAGAGTTGCAAGGACCCATCTCTTAAACACAGAGTCTGCAGCCCCTAACTGACACCCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506699.5
ENST00000515433.1
CDS CCA 90 bp CACCTCATGGCAGGTGGTATGTTCATCTTGGACCAGAGCAGGTCTTaGGCTCAATCTAGCTGCACAAATGAGGCAGCAGCAGGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: HLMAGGMFILDQSRS*AQSSCTNEAAAGAK
Trigger: TTTGGCTCCTGCTGCTGCCTCATTTGTGCAGCTAGATTGAGCCCAAGACCTGCTCTGGTCCAAGATGAACATACCACCTGCCATGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509749.1
CDS-3UTR CAA 90 bp GCACACATAGCTGACTTCAAGATGTGGTTGTTCAGCAGGTCTCTCAGGGCTTCTTTCTCGAAGGCCTCATaGGTCGGGGCCAAAAGCGTG +
Preference number: 5 (lower is better)
Translates to: AHIADFKMWLFSRSLRASFSKAS*VGAKSV
Trigger: CACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAA...AGAAGCCCTGAGAGACCTGCTGAACAACCACATCTTGAAGTCAGCTATGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACAGCTAGGATGTCTTTATaGGAGATGATCGCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTARMSL*EMIAFP
Trigger: CGGGAAGGCGATCATCTCCAATAAAGACATCCTAGC...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TCCTTGGCATCTCCCAAGAGTCTGCTCCGTTCTCTTGGTGGCAGGGCTCGGAAGTCCGAAGCAAATTCCTaGTATGGGCATCAATTGGAG +
Preference number: 5 (lower is better)
Translates to: SLASPKSLLRSLGGRARKSEANS*YGHQLE
Trigger: CTCCAATTGATGCCCATACAAGGAATTTGCTTCGGA...CTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGAGATGCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CAA 90 bp ATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAGAGGTCTGCTCCGTTCTCTaGGTGGCAGGGCTCGGAAGG +
Preference number: 5 (lower is better)
Translates to: ITNVVFQDVGKFLGISQEVCSVL*VAGLGR
Trigger: CCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGAC...CTCTTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CAA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACATGTTGGCAAGTTCCTaGGCATCTCCCAAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHMLASS*ASPKSL
Trigger: CAGACTCTTGGGAGATGCCAAGGAACTTGCCAACAT...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000514554.5
CDS-3UTR CAA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTCGGCAACAGGCTCCTaGTTGACACTCACCACATTG +
Preference number: 5 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSSATGS*LTLTTL
Trigger: CAATGTGGTGAGTGTCAACAAGGAGCCTGTTGCCGA...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGAGGAGGCTGCAGAACATaGGTGATGACATGGACCACG +
Preference number: 5 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRGGCRT*VMTWTT
Trigger: CGTGGTCCATGTCATCACCAATGTTCTGCAGCCTCC...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp AATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTGGAGGCTGCAGAACATaGGTGATGACATGGACCACG +
Preference number: 5 (lower is better)
Translates to: NLREIGGELPWCIPPVVLGGCRT*VMTWTT
Trigger: CGTGGTCCATGTCATCACCAATGTTCTGCAGCCTCC...AAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS GCA 90 bp GTCTGGTCAATGAATTCTCCATGTTCAAGGGCATTCAGGGGAACCTaGTCTATGTTCCCCTACAGGAGCCATCCTCTACCTCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: VWSMNSPCSRAFRGT*SMFPYRSHPLPLLQ
Trigger: CTGCAGGAGAGGTAGAGGATGGCTCCTGTAGGGGAACATAGAGCAGGTTCCCCTGAATGCCCTTGAACATGGAGAATTCATTGACCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp CCGTCCCGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGATCTGCTaGATGTTGTTGGTGATGGTGGAGATGACCTTATCGATGAGGTGC +
Preference number: 5 (lower is better)
Translates to: PSRRVSKVSSISMIC*MLLVMVEMTLSMRC
Trigger: GCACCTCATCGATAAGGTCATCTCCACCATCACCAACAACATCCAGCAGATCATTGAGATCGAGGACACCTTTGAGACCCTTCGGGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506699.5
CDS CCA 90 bp GTGGATATCCTGAGGGTCACCTCATGGCAGGTGGTATGTTCATCTTaGACCAGAGCAGGTCTTGGGCTCAATCTAGCTGCACAAATGAGG +
Preference number: 5 (lower is better)
Translates to: VDILRVTSWQVVCSS*TRAGLGLNLAAQMR
Trigger: CCTCATTTGTGCAGCTAGATTGAGCCCAAGACCTGCTCTGGTCCAAGATGAACATACCACCTGCCATGAGGTGACCCTCAGGATATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509749.1
CDS-3UTR CAA 90 bp AGAGGCCAGCTGGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATGGGCGCACCACCCCGTTGGTaGCATGGTGGTCGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: RGQLVFNYVVPKQIPCMGAPPRW*HGGRLS
Trigger: TGAAAGCCGACCACCATGCAACCAACGGGGTGGTGC...GCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCAGCATGCTAAAGCGATaGTCTCCCTTCAGGACATCC +
Preference number: 5 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSSMLKR*SPFRTS
Trigger: GGATGTCCTGAAGGGAGACAATCGCTTTAGCATGCT...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CAAAGTCTCACTAGGGATCTTCTCGAAGGCCTCATTGGTCGGGGCCAAAAGCGTATGTTGGCAAGTTCCTaGGCATCTCCCAAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: QSLTRDLLEGLIGRGQKRMLASS*ASPKSL
Trigger: CAGACTCTTGGGAGATGCCAAGGAACTTGCCAACAT...ACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAAGATCCCTAGTGAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp GGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTTGAGCCCTGATAAGCTGACTTCCAGCTaGTCACCTTGGAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: GAKSVYWPLPSSIVLSPDKLTSS*SPWRDF
Trigger: AAAGTCTCTCCAAGGTGACAAGCTGGAAGTCAGCTT...ATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp CTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGACACGCAACAGGCTCCTTGTaGACACTCACCACATTGTTT +
Preference number: 5 (lower is better)
Translates to: LPGQGPIKASKPRVDVRHATGSL*TLTTLF
Trigger: AAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTGC...GTGTCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS TCA 90 bp TCAAGGAGGGCCCAGAGGAGAAGATGTAAGTGGTCACCCCTGAAATaGAGAACTCCCTGCCCAGGGAATAAGCACTTATTAAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SRRAQRRRCKWSPLK*RTPCPGNKHLLSSH
Trigger: GTGGGAGCTTAATAAGTGCTTATTCCCTGGGCAGGGAGTTCTTCATTTCAGGGGTGACCACTTACATCTTCTCCTCTGGGCCCTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513497.1
CDS CCA 90 bp ACCAGGGCCCCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTaGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCAATCTGTC +
Preference number: 5 (lower is better)
Translates to: TRAPMPPLTRISSPM*YFRMLASSLASQSV
Trigger: GACAGATTGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGGGCCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508076.5
CDS CCA 90 bp GTGAATGCACACATGAGGAGAGGCAGGACTGAGGTTCAACTGCACTaGAGGCAAGGAACATACACTGAGGTGAGATGCTGTAAGAGGAGT +
Preference number: 5 (lower is better)
Translates to: VNAHMRRGRTEVQLH*RQGTYTEVRCCKRS
Trigger: ACTCCTCTTACAGCATCTCACCTCAGTGTATGTTCCTTGCCTCCAGTGCAGTTGAACCTCAGTCCTGCCTCTCCTCATGTGTGCATTCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS CCA 90 bp GGTGATGCAAAGGGATCAATTGCTGTTCACGTGCTGCCAACTATGTaGGAACATCATTTTCTTGCAGACCCCCGTCCCGAAGGGTCTCAA +
Preference number: 5 (lower is better)
Translates to: GDAKGSIAVHVLPTM*EHHFLADPRPEGSQ
Trigger: TTGAGACCCTTCGGGACGGGGGTCTGCAAGAAAATGATGTTCCCACATAGTTGGCAGCACGTGAACAGCAATTGATCCCTTTGCATCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506699.5
CDS CCA 90 bp GGTGATGCAAAGGGATCAATTGCTGTTCACGTGCTGCCAACTATGTaGGAACATCATTTTCTTGCAGACCCCCGTCCTTCGAGCAACCCA +
Preference number: 5 (lower is better)
Translates to: GDAKGSIAVHVLPTM*EHHFLADPRPSSNP
Trigger: TGGGTTGCTCGAAGGACGGGGGTCTGCAAGAAAATGATGTTCCCACATAGTTGGCAGCACGTGAACAGCAATTGATCCCTTTGCATCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS-3UTR CAA 90 bp CAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCCTTTGGTACCACTGCTaGCAGTTGGTGAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: QSLWKSERNWRRAAVVHSLWYHC*QLVKYF
Trigger: GAAGTACTTCACCAACTGCAAGCAGTGGTACCAAAG...GGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp CAACCGCTCACTTCCAGAGAGATGATTGCCGAGGCCGGCTTGTCTGAAAAGGTCTGGTGGATCTGGATGTaGGAATTCTGGTACATAGAG +
Preference number: 5 (lower is better)
Translates to: QPLTSREMIAEAGLSEKVWWIWM*EFWYIE
Trigger: CTCTATGTACCAGAATTCCAACATCCAGATCCACCA...GACCTTTTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAGTGAGCGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGAGACTTCAAGATGTGGTaGTTCAGCAGGTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRDFKMW*FSRSLR
Trigger: CCTGAGAGACCTGCTGAACAACCACATCTTGAAGTC...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000514554.5
CDS-3UTR CAA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGCTAGGATGTCTTTATaGGAGATGATCGCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: CGNLREIGGELPWCIPPVARMSL*EMIAFP
Trigger: CGGGAAGGCGATCATCTCCAATAAAGACATCCTAGC...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp GGCCCCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTGGTATTTCAGGATGCTAGGATGTCTTTATaGGAGATGATCGCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: GPDASANQDFITNVVFQDARMSL*EMIAFP
Trigger: CGGGAAGGCGATCATCTCCAATAAAGACATCCTAGC...ATCCTGAAATACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp AGGCCTCATTGGTCGGGGCCAAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGAATTCAAATAGTGTCTaGGCTGAGTCTGGGATGAGT +
Preference number: 5 (lower is better)
Translates to: RPHWSGPKACTGRYLQASNSNSV*AESGMS
Trigger: ACTCATCCCAGACTCAGCCAAGACACTATTTGAATT...CGATGCTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAATGAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp CTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAGGAGGGGTTCCATCTTaGAATACAGAATTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LREIGGELPWCIPPVVLQGGVPS*NTEFRG
Trigger: TCCCCTGAATTCTGTATTCAAAGATGGAACCCCTCC...TTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CCCTCTTGTCGTGGGCCGCGATGCAGCTGTTCTCAATGCAGAGGCTATTACGATTCCGAAGCAAATTCCTaGTATGGGCATCAATTGGAG +
Preference number: 5 (lower is better)
Translates to: PSCRGPRCSCSQCRGYYDSEANS*YGHQLE
Trigger: CTCCAATTGATGCCCATACAAGGAATTTGCTTCGGA...ATCGTAATAGCCTCTGCATTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS-3UTR CAA 90 bp TGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTGTAAGCATGCTAAAGCGATaGTCTCCCTTCAGGACATCC +
Preference number: 5 (lower is better)
Translates to: CGNLREIGGELPWCIPPVSMLKR*SPFRTS
Trigger: GGATGTCCTGAAGGGAGACAATCGCTTTAGCATGCT...TACAGGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGAAGCATGCTAAAGCGATaGTCTCCCTTCAGGACATCC +
Preference number: 5 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRSMLKR*SPFRTS
Trigger: GGATGTCCTGAAGGGAGACAATCGCTTTAGCATGCT...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000514554.5
CDS-3UTR CAA 90 bp CAGTCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCAAGCTGACTTCCAGCTaGTCACCTTGGAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: QSLWKSERNWRRAAVVHSKLTSS*SPWRDF
Trigger: AAAGTCTCTCCAAGGTGACAAGCTGGAAGTCAGCTT...GGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATAAGCTGACTTCCAGCTaGTCACCTTGGAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: SSPTCTRLTSHYGAAHVHKLTSS*SPWRDF
Trigger: AAAGTCTCTCCAAGGTGACAAGCTGGAAGTCAGCTT...ATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCGCAACAGGCTCCTTGTaGACACTCACCACATTGTTT +
Preference number: 5 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSATGSL*TLTTLF
Trigger: AAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTGC...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CCCAGAGTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCTGGTCTGCAACAGGCTCCTTGTaGACACTCACCACATTGTTT +
Preference number: 5 (lower is better)
Translates to: PRVSRVCPWYRYLEASWSATGSL*TLTTLF
Trigger: AAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTGC...AGACCAGCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAACTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCAACGCTGATGCTTGTTaGAAGATCTCAAGCGCAGAG +
Preference number: 5 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSNADAC*KISSAE
Trigger: CTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGTT...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CAA 90 bp CAAAGTCTCACTAGGGATCTTCTCGAAGGCCTCATTGGTCGGGGCCAAAAGCGTAACGCTGATGCTTGTTaGAAGATCTCAAGCGCAGAG +
Preference number: 5 (lower is better)
Translates to: QSLTRDLLEGLIGRGQKRNADAC*KISSAE
Trigger: CTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGTT...ACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAAGATCCCTAGTGAGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS TCA 90 bp GCCCTGATGCAGCCACAGCAGCCAAATCTAAACAGTAAGAGGAGGTaGTGCAAAGGGATCAATTGCTGTTCACGTGCTGCCAACTATGTG +
Preference number: 5 (lower is better)
Translates to: ALMQPQQPNLNSKRR*CKGINCCSRAANYV
Trigger: CACATAGTTGGCAGCACGTGAACAGCAATTGATCCCTTTGCATCACCTCCTCTTACTGTTTAGATTTGGCTGCTGTGGCTGCATCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506699.5
CDS GCA 90 bp TCCCTTACCCGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGATCTaGTGGATGTTGTTGGTGATGGTGGAGATGACCTTATCGATGAGG +
Preference number: 5 (lower is better)
Translates to: SLTRRVSKVSSISMI*WMLLVMVEMTLSMR
Trigger: CCTCATCGATAAGGTCATCTCCACCATCACCAACAACATCCAGCAGATCATTGAGATCGAGGACACCTTTGAGACCCTTCGGGTAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 90 bp CACACTGTCACTCGACAGTTACTGGTAATCACGTACATGAGCCCATaGATGGAAGGATCACACCACCCATTCTCTACACAGCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: HTVTRQLLVITYMSP*MEGSHHPFSTQLPE
Trigger: TTCTGGCAGCTGTGTAGAGAATGGGTGGTGTGATCCTTCCATGCATGGGCTCATGTACGTGATTACCAGTAACTGTCGAGTGACAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 90 bp CTTACCCGAAGGGTCTCAAAGGTGTCCTCGATCTCAATGATCTGCTaGATGTTGTTGGTGATGGTGGAGATGACCTTATCGATGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LTRRVSKVSSISMIC*MLLVMVEMTLSMRC
Trigger: GCACCTCATCGATAAGGTCATCTCCACCATCACCAACAACATCCAGCAGATCATTGAGATCGAGGACACCTTTGAGACCCTTCGGGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS-3UTR CAA 90 bp TCTTTGAATACAGAATTCAGGGGAGCCAGGAGGGTCAACCGCTCACTTCCAGAGGCCACAGATTTTCCTTaGGTACCACTGCTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: SLNTEFRGARRVNRSLPEATDFP*VPLLAV
Trigger: AACTGCAAGCAGTGGTACCAAAGGAAAATCTGTGGC...CTCTGGAAGTGAGCGGTTGACCCTCCTGGCTCCCCTGAATTCTGTATTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGGGGTCTCGTAAAGGTTaGAGAGTGGTAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRGSRKG*RVVGLL
Trigger: CAGCAGCCCTACCACTCTCAAACCTTTACGAGACCC...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGTTGAGCAGCTCAATGTaGACATTGCTGACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVLSSSM*TLLTRE
Trigger: CTCCCTGGTCAGCAATGTCAACATTGAGCTGCTCAA...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp GGCCCCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTGGTATTTCAGGATGGAGGGGTTCCATCTTaGAATACAGAATTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GPDASANQDFITNVVFQDGGVPS*NTEFRG
Trigger: TCCCCTGAATTCTGTATTCAAAGATGGAACCCCTCC...ATCCTGAAATACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCTCCGAAGCAAATTCCTaGTATGGGCATCAATTGGAG +
Preference number: 5 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSSEANS*YGHQLE
Trigger: CTCCAATTGATGCCCATACAAGGAATTTGCTTCGGA...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CTCCTCCCCCACATGCACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTGACACTCACCACATaGTTTTTCAAGCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: LLPHMHKAHISLWCGPCTLTLTT*FFKLTS
Trigger: GGAAGTCAGCTTGAAAAACAATGTGGTGAGTGTCAA...TGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTGCATGTGGGGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TTTCTACCTGGACAGGGCCCCATAAAAGCCTCCAAGCCACGTGTAGATGTGAGAAACGCTGATGCTTGTTaGAAGATCTCAAGCGCAGAG +
Preference number: 5 (lower is better)
Translates to: FLPGQGPIKASKPRVDVRNADAC*KISSAE
Trigger: CTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGTT...TCTCACATCTACACGTGGCTTGGAGGCTTTTATGGGGCCCTGTCCAGGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000508076.5
CDS TCA 90 bp TTGAAGATCTCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTTCCTaGGGTCTGTTGGCTGAAGAGGAAAGAAAAGGCAGGTTTGACCAG +
Preference number: 5 (lower is better)
Translates to: LKISSAESASSSPLS*GLLAEEERKGRFDQ
Trigger: CTGGTCAAACCTGCCTTTTCTTTCCTCTTCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGAGATCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS-3UTR CAA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCGGGTCTCGTAAAGGTTaGAGAGTGGTAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLGSRKG*RVVGLL
Trigger: CAGCAGCCCTACCACTCTCAAACCTTTACGAGACCC...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATAGAGGCCCAGGCCTCGTaGCTAGGGGCGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYIEAQAS*LGAKMV
Trigger: CACCATCTTCGCCCCTAGCAACGAGGCCTGGGCCTC...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CAA 90 bp GTTTCCAGGGTCTGTCCATGGTACAGATACTTAGAGGCCAGCTGGTCTTTAATTAGCTCAATGTTGACATaGCTGACCAGGGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VSRVCPWYRYLEASWSLISSMLT*LTRESS
Trigger: GCTGGACTCCCTGGTCAGCAATGTCAACATTGAGCT...AATTAAAGACCAGCTGGCCTCTAAGTATCTGTACCATGGACAGACCCTGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp TCTCTGTGGAAATCTGAGAGAAATTGGCGGAGAGCTGCCGTGGTGCATTCCTCCAATTCAAATAGTGTCTaGGCTGAGTCTGGGATGAGT +
Preference number: 5 (lower is better)
Translates to: SLWKSERNWRRAAVVHSSNSNSV*AESGMS
Trigger: ACTCATCCCAGACTCAGCCAAGACACTATTTGAATT...GGAGGAATGCACCACGGCAGCTCTCCGCCAATTTCTCTCAGATTTCCACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp AAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGATTGCCGAGGCCGGCTaGTCTGAAAAGGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: KAHISLWCGPCTLKCDTWIAEAG*SEKVNG
Trigger: GCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAAT...CCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp GGAGAGCTGCCGTGGTGCATTCCTCCTGTAGTGCTTCAAGCTAATGCTTCATCCTTGACACTCACCACATaGTTTTTCAAGCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: GELPWCIPPVVLQANASSLTLTT*FFKLTS
Trigger: GGAAGTCAGCTTGAAAAACAATGTGGTGAGTGTCAA...GGATGAAGCATTAGCTTGAAGCACTACAGGAGGAATGCACCACGGCAGCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503087.1
ENST00000507018.5
CDS-3UTR CAA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGAGGAGGCTGCAGAACATaGGTGATGACATGGACCACG +
Preference number: 5 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGGGCRT*VMTWTT
Trigger: CGTGGTCCATGTCATCACCAATGTTCTGCAGCCTCC...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS TCA 90 bp AGGTTTGAGAGTGGTAGGGCACTTTATATCAGGGACTTGAACATCTaGGGATATGGCATCCTAGAATGGGTCCTAGAATCAATCCCCCGC +
Preference number: 5 (lower is better)
Translates to: RFESGRALYIRDLNI*GYGILEWVLESIPR
Trigger: GCGGGGGATTGATTCTAGGACCCATTCTAGGATGCCATATCCTCAGATGTTCAAGTCCCTGATATAAAGTGCCCTACCACTCTCAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504185.5
CDS TCA 90 bp ACCCACAATCTGTCTAATGGTCAGAGGACACAAAGCACATGTTCATaGCCACAAATCTGCCCCAGCAGTCAGTTGGCCTCTGGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: THNLSNGQRTQSTCS*PQICPSSQLASGLN
Trigger: ATTTAACCCAGAGGCCAACTGACTGCTGGGGCAGATTTGTGGTCATGAACATGTGCTTTGTGTCCTCTGACCATTAGACAGATTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513497.1
CDS-3UTR CAA 90 bp TCATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAGTTGAGCAGCTCAATGTaGACATTGCTGACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SSPMWYFRMLASSLASPKLSSSM*TLLTRE
Trigger: CTCCCTGGTCAGCAATGTCAACATTGAGCTGCTCAA...CTTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCACCACCCCGTTGGTaGCATGGTGGTCGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCAPPRW*HGGRLS
Trigger: TGAAAGCCGACCACCATGCAACCAACGGGGTGGTGC...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGAATGATCTGCTGGATGTaGTTGGTGATGGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGMICWM*LVMVEM
Trigger: CATCTCCACCATCACCAACAACATCCAGCAGATCAT...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTATTCTCGAAGGCCTCATaGGTCGGGGCCAAAAGCGTG +
Preference number: 5 (lower is better)
Translates to: QRPPEKEIPILLQDLILLFSKAS*VGAKSV
Trigger: CACGCTTTTGGCCCCGACCAATGAGGCCTTCGAGAA...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp AGAGGCCAGCTGGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATGGGCATGTTGGCAAGTTCCTaGGCATCTCCCAAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: RGQLVFNYVVPKQIPCMGMLASS*ASPKSL
Trigger: CAGACTCTTGGGAGATGCCAAGGAACTTGCCAACAT...GCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507018.5
ENST00000509485.5
CDS GCA 90 bp TGTCTCTCTCCAGATAGAGTATTAGCTCTACTGAGAATAGAACTTTaGCTTCCTTGTTCACCTCTATACTCCTGGCACATAGGCCCACCC +
Preference number: 5 (lower is better)
Translates to: CLSPDRVLALLRIEL*LPCSPLYSWHIGPP
Trigger: GGGTGGGCCTATGTGCCAGGAGTATAGAGGTGAACAAGGAAGGCAAAGTTCTATTCTCAGTAGAGCTAATACTCTATCTGGAGAGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS-3UTR CAA 90 bp ACTGAAGCTCCTTTTCCAGGGACTTGGCATAGGCAGTCAATTCCACATTTGGGATGGTGGATCTGGATGTaGGAATTCTGGTACATAGAG +
Preference number: 5 (lower is better)
Translates to: TEAPFPGTWHRQSIPHLGWWIWM*EFWYIE
Trigger: CTCTATGTACCAGAATTCCAACATCCAGATCCACCA...TCCCAAATGTGGAATTGACTGCCTATGCCAAGTCCCTGGAAAAGGAGCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTACCTTCAAGCATCGTGTaGAGCCCTGATGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: QRPPEKEIPILLQDLILLPSSIV*SPDAAT
Trigger: TGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGG...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTGACTTCAAGATGTGGTaGTTCAGCAGGTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTDFKMW*FSRSLR
Trigger: CCTGAGAGACCTGCTGAACAACCACATCTTGAAGTC...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTAATTGCCGAGGCCGGCTaGTCTGAAAAGGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: QRPPEKEIPILLQDLILLIAEAG*SEKVNG
Trigger: GCCATTGACCTTTTCAGACAAGCCGGCCTCGGCAAT...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCATGTTGGCAAGTTCCTaGGCATCTCCCAAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLMLASS*ASPKSL
Trigger: CAGACTCTTGGGAGATGCCAAGGAACTTGCCAACAT...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp GGACTTGGCATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGTTGACACTCACCACATaGTTTTTCAAGCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: GLGIGSQFHIWDRSSLEVLTLTT*FFKLTS
Trigger: GGAAGTCAGCTTGAAAAACAATGTGGTGAGTGTCAA...CACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTATGCCAAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS TCA 90 bp CCTTGTATGGGCATCAATTGGAGGGGTTCCATCTACAAGAAAGGGTaGTGGTTAGGTCCAGAGAGATGTGCTCCTTTGAATACAGAATTC +
Preference number: 5 (lower is better)
Translates to: PCMGINWRGSIYKKG*WLGPERCAPLNTEF
Trigger: GAATTCTGTATTCAAAGGAGCACATCTCTCTGGACCTAACCATCACCCTTTCTTGTAGATGGAACCCCTCCAATTGATGCCCATACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS CCA 90 bp GAAACCATTAGCATGTCATTCATAACAACCGTGACTGAGGGGCACTaGTGGGCTTTCTGGCTCACATTTCCAAAGACATGTTTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: ETISMSFITTVTEGH*WAFWLTFPKTCFLH
Trigger: ATGGAGAAAACATGTCTTTGGAAATGTGAGCCAGAAAGCCCACCAGTGCCCCTCAGTCACGGTTGTTATGAATGACATGCTAATGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS CCA 90 bp GCCAGCTGGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTTCCATCTACAAGAAAGGGTGATGGT +
Preference number: 5 (lower is better)
Translates to: ASWSLIMWFRSKFLV*ASIGGVPSTRKGDG
Trigger: ACCATCACCCTTTCTTGTAGATGGAACCCCTCCAATTGATGCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR CAA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTGCCACAGATTTTCCTTaGGTACCACTGCTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLATDFP*VPLLAV
Trigger: AACTGCAAGCAGTGGTACCAAAGGAAAATCTGTGGC...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp GCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTTGGTTTGACTTCAAGATGTGGTaGTTCAGCAGGTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: AHISLWCGPCTLKCDTWFDFKMW*FSRSLR
Trigger: CCTGAGAGACCTGCTGAACAACCACATCTTGAAGTC...AAACCAAGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTATGATCGCCTTCCCGTaGATAGTGAGCATGTCCCCG +
Preference number: 5 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCMIAFP*IVSMSP
Trigger: CGGGGACATGCTCACTATCAACGGGAAGGCGATCAT...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CTTCACAATACAGGTTGGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAGAAAATGATCGCCTTCCCGTaGATAGTGAGCATGTCCCCG +
Preference number: 5 (lower is better)
Translates to: LHNTGWIIVWFILKGLQKMIAFP*IVSMSP
Trigger: CGGGGACATGCTCACTATCAACGGGAAGGCGATCAT...TTTCTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATTGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp CATGAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCAAGCTGACTTCCAGCTaGTCACCTTGGAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: HEAGLLDSCFMSPTILKLKLTSS*SPWRDF
Trigger: AAAGTCTCTCCAAGGTGACAAGCTGGAAGTCAGCTT...GAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CACAAGGCTCACATCTCATTATGGTGCGGCCCATGTACATTAAAGTGTGATACTGCAACAGGCTCCTTGTaGACACTCACCACATTGTTT +
Preference number: 5 (lower is better)
Translates to: HKAHISLWCGPCTLKCDTATGSL*TLTTLF
Trigger: AAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTGC...AGTATCACACTTTAATGTACATGGGCCGCACCATAATGAGATGTGAGCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000503087.1
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp ATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTGCCAGGAGCAACAGGCTCCTTGTaGACACTCACCACATTGTTT +
Preference number: 5 (lower is better)
Translates to: IMMPFLQLCKGFTKTVPGATGSL*TLTTLF
Trigger: AAACAATGTGGTGAGTGTCAACAAGGAGCCTGTTGC...TCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTCGGCAACAGGCTCCTaGTTGACACTCACCACATTG +
Preference number: 5 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNSATGS*LTLTTL
Trigger: CAATGTGGTGAGTGTCAACAAGGAGCCTGTTGCCGA...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp GAGGCTGGATTGCTTGATTCATGTTTTATGAGCCCCACAATACTGAAGCTCCTTAACGCTGATGCTTGTTaGAAGATCTCAAGCGCAGAG +
Preference number: 5 (lower is better)
Translates to: EAGLLDSCFMSPTILKLLNADAC*KISSAE
Trigger: CTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGTT...AAGGAGCTTCAGTATTGTGGGGCTCATAAAACATGAATCAAGCAATCCAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000508076.5
CDS-3UTR CAA 90 bp AGAGGCCAGCTGGTCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATGGGCGAGAGATGTGCTCCTTaGAATACAGAATTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: RGQLVFNYVVPKQIPCMGERCAP*NTEFRG
Trigger: TCCCCTGAATTCTGTATTCAAAGGAGCACATCTCTC...GCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGACCAGCTGGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS-3UTR CAA 90 bp CACCCAGCAAAAATGCTAAGCTCTAAAGCGATTGTCTCCCTTCAGGACATCCATTTGTATGGGCATCAATaGGAGGGGTTCCATCTACAA +
Preference number: 5 (lower is better)
Translates to: HPAKMLSSKAIVSLQDIHLYGHQ*EGFHLQ
Trigger: TTGTAGATGGAACCCCTCCAATTGATGCCCATACAA...ATGGATGTCCTGAAGGGAGACAATCGCTTTAGAGCTTAGCATTTTTGCTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS CCA 90 bp ACCATTAGCATGTCATTCATAACAACCGTGACTGAGGGGCACTGGTaGGCTTTCTGGCTCACATTTCCAAAGACATGTTTTCTCCATAAT +
Preference number: 5 (lower is better)
Translates to: TISMSFITTVTEGHW*AFWLTFPKTCFLHN
Trigger: ATTATGGAGAAAACATGTCTTTGGAAATGTGAGCCAGAAAGCCCACCAGTGCCCCTCAGTCACGGTTGTTATGAATGACATGCTAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS-3UTR CAA 90 bp ATAGGCAGTCAATTCCACATTTGGGATAGGTCCTCTCTGGAAGTGAATGTCAGGTACCACTGCTTGCAGTaGGTGAAGTACTTCCTATTA +
Preference number: 5 (lower is better)
Translates to: IGSQFHIWDRSSLEVNVRYHCLQ*VKYFLL
Trigger: TAATAGGAAGTACTTCACCAACTGCAAGCAGTGGTA...CCTGACATTCACTTCCAGAGAGGACCTATCCCAAATGTGGAATTGACTGCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp TATTCTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTGACTTCAAGATGTGGTaGTTCAGCAGGTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: YSQRPPEKEIPILLQDLIDFKMW*FSRSLR
Trigger: CCTGAGAGACCTGCTGAACAACCACATCTTGAAGTC...AATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp TATTCTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTGCTAGGATGTCTTTATaGGAGATGATCGCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: YSQRPPEKEIPILLQDLIARMSL*EMIAFP
Trigger: CGGGAAGGCGATCATCTCCAATAAAGACATCCTAGC...AATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp GGTTTATTCTCAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTGGAGGGGTTCCATCTTaGAATACAGAATTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GLFSKASRKRDSNPSAGSGGVPS*NTEFRG
Trigger: TCCCCTGAATTCTGTATTCAAAGATGGAACCCCTCC...AGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTGAGAATAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp ATCACCAATGTGGTATTTCAGGATGTTGGCAAGTTCCTTGGCATCTCCCAAGAGTTGACACTCACCACATaGTTTTTCAAGCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: ITNVVFQDVGKFLGISQELTLTT*FFKLTS
Trigger: GGAAGTCAGCTTGAAAAACAATGTGGTGAGTGTCAA...CTCTTGGGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507018.5
CDS-3UTR CAA 90 bp GAAGATACAGCAGAAGAGAGAAGGCACCTTTTGGACCAAGGAGGGCTGTATTTTCAGGCAAGAGCTATGTaGAGTTGTACTTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: EDTAEERRHLLDQGGLYFQARAM*SCTSFL
Trigger: CAAAAAGGAAGTACAACTCAACATAGCTCTTGCCTG...AAAATACAGCCCTCCTTGGTCCAAAAGGTGCCTTCTCTCTTCTGCTGTATCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATAAGCTCAATGTTGACATaGCTGACCAGGGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYISSMLT*LTRESS
Trigger: GCTGGACTCCCTGGTCAGCAATGTCAACATTGAGCT...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442011.7
CDS-3UTR CAA 90 bp CTCATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACGGAGGGGTTCCATCTTaGAATACAGAATTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LIAYNDAISPAVQGLYKNGGVPS*NTEFRG
Trigger: TCCCCTGAATTCTGTATTCAAAGATGGAACCCCTCC...GTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATATCGGCAACAGGCTCCTaGTTGACACTCACCACATTG +
Preference number: 5 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYISATGS*LTLTTL
Trigger: CAATGTGGTGAGTGTCAACAAGGAGCCTGTTGCCGA...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTAAATTCAAATAGTGTCTaGGCTGAGTCTGGGATGAGT +
Preference number: 5 (lower is better)
Translates to: QRPPEKEIPILLQDLILLNSNSV*AESGMS
Trigger: ACTCATCCCAGACTCAGCCAAGACACTATTTGAATT...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp CAATACAGGTTGGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAGAAAAAGAGTCCGAAGCAAATTCCTaGTATGGGCATCAATTGGAG +
Preference number: 5 (lower is better)
Translates to: QYRLDNCVVYSQRPPEKESEANS*YGHQLE
Trigger: CTCCAATTGATGCCCATACAAGGAATTTGCTTCGGA...CTCTTTTTCTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTTACCACTGCTTGCAGTaGGTGAAGTACTTCCTATTA +
Preference number: 5 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCYHCLQ*VKYFLL
Trigger: TAATAGGAAGTACTTCACCAACTGCAAGCAGTGGTA...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000507018.5
CDS-3UTR CAA 90 bp ATAGCTTATAATGATGCCATTTCTCCAGCTGTGCAAGGGCTTTACAAAAACTGTAATTCAAATAGTGTCTaGGCTGAGTCTGGGATGAGT +
Preference number: 5 (lower is better)
Translates to: IAYNDAISPAVQGLYKNCNSNSV*AESGMS
Trigger: ACTCATCCCAGACTCAGCCAAGACACTATTTGAATT...ACAGTTTTTGTAAAGCCCTTGCACAGCTGGAGAAATGGCATCATTATAAGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000507018.5
ENST00000514554.5
CDS-3UTR CAA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATATCCGAAGCAAATTCCTaGTATGGGCATCAATTGGAG +
Preference number: 5 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYISEANS*YGHQLE
Trigger: CTCCAATTGATGCCCATACAAGGAATTTGCTTCGGA...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442011.7
ENST00000514554.5
CDS TCA 90 bp TTTTACACTAATACAAGTCCCACAGTAAGGAGCTTCCCAGGAGCATaGTTTAGGACCCAGAACTTACATTACGATAAACAAAAACTCTCA +
Preference number: 5 (lower is better)
Translates to: FYTNTSPTVRSFPGA*FRTQNLHYDKQKLS
Trigger: TGAGAGTTTTTGTTTATCGTAATGTAAGTTCTGGGTCCTAAATCATGCTCCTGGGAAGCTCCTTACTGTGGGACTTGTATTAGTGTAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515433.1
ENST00000604555.5
CDS-3UTR CAA 90 bp TTATTACAAACACACCATGGCTCTGTCACAATAGGGAAATCTAAGCTCTACATATTGACACTCACCACATaGTTTTTCAAGCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: LLQTHHGSVTIGKSKLYILTLTT*FFKLTS
Trigger: GGAAGTCAGCTTGAAAAACAATGTGGTGAGTGTCAA...TATGTAGAGCTTAGATTTCCCTATTGTGACAGAGCCATGGTGTGTTTGTAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000508076.5
ENST00000514554.5
CDS-3UTR CAA 90 bp CAAAGGCCTCCAGAAAAAGAGATTCCAATCCTTCTGCAGGATCTCATTTTGTTACCTTCACAATACAGGTaGGATAATTGTGTGGTTTAT +
Preference number: 5 (lower is better)
Translates to: QRPPEKEIPILLQDLILLPSQYR*DNCVVY
Trigger: ATAAACCACACAATTATCCAACCTGTATTGTGAAGG...TAACAAAATGAGATCCTGCAGAAGGATTGGAATCTCTTTTTCTGGAGGCCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS-3UTR CAA 90 bp CTTCACAATACAGGTTGGATAATTGTGTGGTTTATTCTCAAAGGCCTCCAGAAAAAATTATTTCCTTCCTaGTCAGCAACCAGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: LHNTGWIIVWFILKGLQKKLFPS*SATSSH
Trigger: ATGAGAACTGGTTGCTGACAAGGAAGGAAATAATTT...TTTCTGGAGGCCTTTGAGAATAAACCACACAATTATCCAACCTGTATTGTGAAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000604555.5
CDS CCA 72 bp GCCTGCTGTGCTGCAGCACCAGCTGGTAGGGCGACTTaGCGGGACCCGCCAGGGTCGCGGCGGGGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: ACCAAAPAGRAT*RDPPGSRRGPG
Trigger: CCCTGGGCCCCGCCGCGACCCTGGCGGGTCCCGCCAAGTCGCCCTACCAGCTGGTGCTGCAGCACAGCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
CDS CCA 72 bp CCAGGGCGAGAGCCAGCAGCCGCACGAAGAGCGCCATaGAGCGGGACGACGCGCACCGAGCGAGCTAGCGAC +
Preference number: 6 (lower is better)
Translates to: PGREPAAARRAP*SGTTRTERASD
Trigger: GTCGCTAGCTCGCTCGGTGCGCGTCGTCCCGCTCCATGGCGCTCTTCGTGCGGCTGCTGGCTCTCGCCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
CDS CCA 72 bp AAGAGTCCCCCGGGCAGACGGAGGTCATCTCACAGCTaGCAAGGAGGCCCAGGCCTCGTTGCTAGGGGCGAA +
Preference number: 6 (lower is better)
Translates to: KSPPGRRRSSHS*QGGPGLVARGE
Trigger: TTCGCCCCTAGCAACGAGGCCTGGGCCTCCTTGCCAGCTGTGAGATGACCTCCGTCTGCCCGGGGGACTCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506699.5
ENST00000507018.5
ENST00000515433.1
CDS GCA 72 bp AGACAGCGAAGCTCCCAGCTAACAGCCATCCACACCTaGGAGGCCTGTCAGTGCCAGCCAGCCCCAGCGTGT +
Preference number: 6 (lower is better)
Translates to: RQRSSQLTAIHT*EACQCQPAPAC
Trigger: ACACGCTGGGGCTGGCTGGCACTGACAGGCCTCGCAGGTGTGGATGGCTGTTAGCTGGGAGCTTCGCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp GAAGCCAAACCCAAGCTCACCCATGACCATGGCCCCCAGGGGGCCTaGCTGGGCCTGAGCTCCAGCCAGCCTGGCCATCTTTCATGTCCT +
Preference number: 6 (lower is better)
Translates to: EAKPKLTHDHGPQGA*LGLSSSQPGHLSCP
Trigger: AGGACATGAAAGATGGCCAGGCTGGCTGGAGCTCAGGCCCAGCAAGGCCCCCTGGGGGCCATGGTCATGGGTGAGCTTGGGTTTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp GTCAGCACCCGGTCCATCGTGAACAGGGTCCCGTACCTCCCCCTCTaGTCGTGGGCCGCGATGCAGCTGTTCTCAATGCAGAGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: VSTRSIVNRVPYLPL*SWAAMQLFSMQRLC
Trigger: GCAGAGCCTCTGCATTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCCTGTTCACGATGGACCGGGTGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514242.5
CDS TCA 72 bp TCAGGCCTCAGCTTCTCCGTGCGGTCCGTGTACAGCTaGGTGGTGGTGGATCCAACGACTCCCAGGGTCTCG +
Preference number: 6 (lower is better)
Translates to: SGLSFSVRSVYS*VVVDPTTPRVS
Trigger: CGAGACCCTGGGAGTCGTTGGATCCACCACCACTCAGCTGTACACGGACCGCACGGAGAAGCTGAGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
ENST00000515433.1
CDS GCA 72 bp ACCCCATGTGGGAACTGCCACCTCTGGAAGCCACAGTaGAGGTCCAGGGCTCAGAGGACACTGTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: TPCGNCHLWKPQ*RSRAQRTLCCC
Trigger: GCAGCAGCACAGTGTCCTCTGAGCCCTGGACCTGCACTGTGGCTTCCAGAGGTGGCAGTTCCCACATGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp GGGTCCCGTACCTCCCCCTCTTGTCGTGGGCCGCGATaGAGCTGTTCTCAATGCAGAGGCTCTGCACAGAAG +
Preference number: 6 (lower is better)
Translates to: GSRTSPSCRGPR*SCSQCRGSAQK
Trigger: CTTCTGTGCAGAGCCTCTGCATTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514242.5
CDS CCA 72 bp ACCTCTCCTGCAGAAGAGTTCCTGCTAGGCCCCTCTTaGGAGGCAATGTGTCCCAAGCCTGGGCCTCCACCC +
Preference number: 6 (lower is better)
Translates to: TSPAEEFLLGPS*EAMCPKPGPPP
Trigger: GGGTGGAGGCCCAGGCTTGGGACACATTGCCTCCCAAGAGGGGCCTAGCAGGAACTCTTCTGCAGGAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp GTGCCAGCCAGCCCCAGCGTGTTTGTCTCTCTGTGTTaGAGATCTCTAGGGAGGGTCCGCCTCACTCCCACT +
Preference number: 6 (lower is better)
Translates to: VPASPSVFVSLC*RSLGRVRLTPT
Trigger: AGTGGGAGTGAGGCGGACCCTCCCTAGAGATCTCCAACACAGAGAGACAAACACGCTGGGGCTGGCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 72 bp TACCTCTCCTGCAGAAGAGTTCCTGCTAGGCCCCTCTaGGGAGGCAATGTGTCCCAAGCCTGGGCCTCCACC +
Preference number: 6 (lower is better)
Translates to: YLSCRRVPARPL*GGNVSQAWAST
Trigger: GGTGGAGGCCCAGGCTTGGGACACATTGCCTCCCAAGAGGGGCCTAGCAGGAACTCTTCTGCAGGAGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 72 bp AGTGCCAGCCAGCCCCAGCGTGTTTGTCTCTCTGTGTaGGAGATCTCTAGGGAGGGTCCGCCTCACTCCCAC +
Preference number: 6 (lower is better)
Translates to: SASQPQRVCLSV*EISREGPPHSH
Trigger: GTGGGAGTGAGGCGGACCCTCCCTAGAGATCTCCAACACAGAGAGACAAACACGCTGGGGCTGGCTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp GACCTCACCCACTGGCCTCTCCCTTGCCCTTCCTGCCCTGAGCCTTaGCTATTACTCTCCCCTCTACTGGGTGTGCTCTTGCCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: DLTHWPLPCPSCPEP*LLLSPLLGVLLPQH
Trigger: ATGCTGGGGCAAGAGCACACCCAGTAGAGGGGAGAGTAATAGCAAAGGCTCAGGGCAGGAAGGGCAAGGGAGAGGCCAGTGGGTGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp GTGCTCCCTGAAGACTCTGGCACTCCCCACAGAAGATaGACACACAGCTTCACTGGTTCCCCGCAAGGGCTC +
Preference number: 6 (lower is better)
Translates to: VLPEDSGTPHRR*THSFTGSPQGL
Trigger: GAGCCCTTGCGGGGAACCAGTGAAGCTGTGTGTGCATCTTCTGTGGGGAGTGCCAGAGTCTTCAGGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp GCCTCAGCTTCTCCGTGCGGTCCGTGTACAGCTGAGTaGTGGTGGATCCAACGACTCCCAGGGTCTCGTAAA +
Preference number: 6 (lower is better)
Translates to: ASASPCGPCTAE*WWIQRLPGSRK
Trigger: TTTACGAGACCCTGGGAGTCGTTGGATCCACCACCACTCAGCTGTACACGGACCGCACGGAGAAGCTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
ENST00000515433.1
CDS CAA 90 bp CCTGCGGCCCCAGAGCAGTCAGAAGCCAGGCTGGAAATCAGACCCTaGACTTCTGTGTCCACACTGGTGGCTTCTCTGCTGTTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: PAAPEQSEARLEIRP*TSVSTLVASLLFWA
Trigger: AGCCCAGAACAGCAGAGAAGCCACCAGTGTGGACACAGAAGTCAAGGGTCTGATTTCCAGCCTGGCTTCTGACTGCTCTGGGGCCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp AGGCCTGTCAGTGCCAGCCAGCCCCAGCGTGTTTGTCTCTCTGTGTaGGAGATCTCTAGGGAGGGTCCGCCTCACTCCCACTTGTATCCT +
Preference number: 6 (lower is better)
Translates to: RPVSASQPQRVCLSV*EISREGPPHSHLYP
Trigger: AGGATACAAGTGGGAGTGAGGCGGACCCTCCCTAGAGATCTCCAACACAGAGAGACAAACACGCTGGGGCTGGCTGGCACTGACAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp TCTGCAAGTCCTGGAGGATTGGGCCTGGCCACTCTGGCCTTGTCTTaGCCCATTGTATGCCCTTCACATGTGACCTCACCCACTGGCCTC +
Preference number: 6 (lower is better)
Translates to: SASPGGLGLATLALS*PIVCPSHVTSPTGL
Trigger: GAGGCCAGTGGGTGAGGTCACATGTGAAGGGCATACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp CCCAGGTCTGCAAGTCCTGGAGGATTGGGCCTGGCCACTCTGGCCTaGTCTTTGCCCATTGTATGCCCTTCACATGTGACCTCACCCACT +
Preference number: 6 (lower is better)
Translates to: PRSASPGGLGLATLA*SLPIVCPSHVTSPT
Trigger: AGTGGGTGAGGTCACATGTGAAGGGCATACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS TCA 72 bp AAAACCCTGACAGGGCAGCCTGCCTCCACTTCCTCCTaGGCAGTCCTTGCCAAGAGGAACATGCCTTCCCCT +
Preference number: 6 (lower is better)
Translates to: KTLTGQPASTSS*AVLAKRNMPSP
Trigger: AGGGGAAGGCATGTTCCTCTTGGCAAGGACTGCTCAGGAGGAAGTGGAGGCAGGCTGCCCTGTCAGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp CATGTTCTCAGCCCTCGTGAGCCCAGGCCTCTCTTCTaGCAAGGATCCCTCCTCAGGAAGCACCCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: HVLSPREPRPLF*QGSLLRKHPSL
Trigger: AAGACTTGGGTGCTTCCTGAGGAGGGATCCTTGGCAGAAGAGAGGCCTGGGCTCACGAGGGCTGAGAACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506699.5
ENST00000515433.1
CDS GCA 72 bp CTATGTTCCCCTACAGGAGCCATCCTCTACCTCTCCTaGAGAAGAGTTCCTGCTAGGCCCCTCTTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LCSPTGAILYLS*RRVPARPLLGG
Trigger: GCCTCCCAAGAGGGGCCTAGCAGGAACTCTTCTGCAGGAGAGGTAGAGGATGGCTCCTGTAGGGGAACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp ACTGGCCTCTCCCTTGCCCTTCCTGCCCTGAGCCTTTaGTATTACTCTCCCCTCTACTGGGTGTGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: TGLSLALPALSL*YYSPLYWVCSC
Trigger: GCAAGAGCACACCCAGTAGAGGGGAGAGTAATAGCAAAGGCTCAGGGCAGGAAGGGCAAGGGAGAGGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp CACCCCATCTCACCGCCAGACAAAGGTGAGTCTGTCTaGTGTGCCTACACTCATGGCTTGCAGCCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: HPISPPDKGESV*CAYTHGLQPSS
Trigger: TGAGGAGGGCTGCAAGCCATGAGTGTAGGCACAGCAGACAGACTCACCTTTGTCTGGCGGTGAGATGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp GCTTCTCCGTGCGGTCCGTGTACAGCTGAGTGGTGGTaGATCCAACGACTCCCAGGGTCTCGTAAAGGTTTG +
Preference number: 6 (lower is better)
Translates to: ASPCGPCTAEWW*IQRLPGSRKGL
Trigger: CAAACCTTTACGAGACCCTGGGAGTCGTTGGATCCACCACCACTCAGCTGTACACGGACCGCACGGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
ENST00000515433.1
CDS CCA 72 bp TCAGCTTCTCCGTGCGGTCCGTGTACAGCTGAGTGGTaGTGGATCCAACGACTCCCAGGGTCTCGTAAAGGT +
Preference number: 6 (lower is better)
Translates to: SASPCGPCTAEW*WIQRLPGSRKG
Trigger: ACCTTTACGAGACCCTGGGAGTCGTTGGATCCACCACCACTCAGCTGTACACGGACCGCACGGAGAAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
ENST00000515433.1
CDS CAA 72 bp TGGTGGATCCAACGACTCCCAGGGTCTCGTAAAGGTTaGAGAGTGGTAGGGCTGCTGGACAGCCCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: WWIQRLPGSRKG*RVVGLLDSPSP
Trigger: GGGAGAAGGGCTGTCCAGCAGCCCTACCACTCTCAAACCTTTACGAGACCCTGGGAGTCGTTGGATCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442011.7
ENST00000506699.5
ENST00000507018.5
CDS CAA 72 bp CACTGGCCTCTCCCTTGCCCTTCCTGCCCTGAGCCTTaGCTATTACTCTCCCCTCTACTGGGTGTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: HWPLPCPSCPEP*LLLSPLLGVLL
Trigger: CAAGAGCACACCCAGTAGAGGGGAGAGTAATAGCAAAGGCTCAGGGCAGGAAGGGCAAGGGAGAGGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 72 bp CCTGGAGGATTGGGCCTGGCCACTCTGGCCTTGTCTTaGCCCATTGTATGCCCTTCACATGTGACCTCACCC +
Preference number: 6 (lower is better)
Translates to: PGGLGLATLALS*PIVCPSHVTSP
Trigger: GGGTGAGGTCACATGTGAAGGGCATACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp GCTGAGTGGTGGTGGATCCAACGACTCCCAGGGTCTCGTAAAGGTTaGAGAGTGGTAGGGCTGCAGGAGCAGAAGACAGAAGGAGGGATG +
Preference number: 6 (lower is better)
Translates to: AEWWWIQRLPGSRKG*RVVGLQEQKTEGGM
Trigger: CATCCCTCCTTCTGTCTTCTGCTCCTGCAGCCCTACCACTCTCAAACCTTTACGAGACCCTGGGAGTCGTTGGATCCACCACCACTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp CAGGATGGAGATGCACTCTTTCCCAGGTCTGCAAGTCCTGGAGGATaGGGCCTGGCCACTCTGGCCTTGTCTTTGCCCATTGTATGCCCT +
Preference number: 6 (lower is better)
Translates to: QDGDALFPRSASPGG*GLATLALSLPIVCP
Trigger: AGGGCATACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGACCTGGGAAAGAGTGCATCTCCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS TCA 72 bp TGGCCTTGTCTTTGCCCATTGTATGCCCTTCACATGTaGCCTCACCCACTGGCCTCTCCCTTGCCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: WPCLCPLYALHM*PHPLASPLPFL
Trigger: CAGGAAGGGCAAGGGAGAGGCCAGTGGGTGAGGTCACATGTGAAGGGCATACAATGGGCAAAGACAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp GAACATGCCTTCCCCTCCAGTTGTAAGACAAATGCCTaGTGGGCATGGGGGAAGGAACCGTATTCCTGCGGC +
Preference number: 6 (lower is better)
Translates to: EHAFPSSCKTNA*WAWGKEPYSCG
Trigger: GCCGCAGGAATACGGTTCCTTCCCCCATGCCCAGCAGGCATTTGTCTTACAACTGGAGGGGAAGGCATGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp CCCTCTTGTCGTGGGCCGCGATGCAGCTGTTCTCAATaGAGAGGCTCTGCACAGAAGAGGGACAGAGAAAGA +
Preference number: 6 (lower is better)
Translates to: PSCRGPRCSCSQ*RGSAQKRDRER
Trigger: TCTTTCTCTGTCCCTCTTCTGTGCAGAGCCTCTGCATTGAGAACAGCTGCATCGCGGCCCACGACAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514242.5
CDS CCA 72 bp CTGCTGTTCTGGGCTCCAAGAGAACATGCGTATGGTTaGAACCAGGGTCCTAGGGTGGGGACATGTGATCCC +
Preference number: 6 (lower is better)
Translates to: LLFWAPREHAYG*NQGPRVGTCDP
Trigger: GGGATCACATGTCCCCACCCTAGGACCCTGGTTCCAACCATACGCATGTTCTCTTGGAGCCCAGAACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp GGTCTGCAAGTCCTGGAGGATTGGGCCTGGCCACTCTaGCCTTGTCTTTGCCCATTGTATGCCCTTCACATG +
Preference number: 6 (lower is better)
Translates to: GLQVLEDWAWPL*PCLCPLYALHM
Trigger: CATGTGAAGGGCATACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp TCTTTCCCAGGTCTGCAAGTCCTGGAGGATTGGGCCTaGCCACTCTGGCCTTGTCTTTGCCCATTGTATGCC +
Preference number: 6 (lower is better)
Translates to: SFPGLQVLEDWA*PLWPCLCPLYA
Trigger: GGCATACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGACCTGGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp GGATGGAGATGCACTCTTTCCCAGGTCTGCAAGTCCTaGAGGATTGGGCCTGGCCACTCTGGCCTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: GWRCTLSQVCKS*RIGPGHSGLVF
Trigger: AAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGCAGACCTGGGAAAGAGTGCATCTCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp ACAGGGGCTGGAGGCTGCAGAACATTGGTGATGACATaGACCACGCCATTTGTGGCCATGATGTCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: TGAGGCRTLVMT*TTPFVAMMSGS
Trigger: CGAGCCTGACATCATGGCCACAAATGGCGTGGTCCATGTCATCACCAATGTTCTGCAGCCTCCAGCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514554.5
CDS CAA 72 bp GCAAGTCCTGGAGGATTGGGCCTGGCCACTCTGGCCTaGTCTTTGCCCATTGTATGCCCTTCACATGTGACC +
Preference number: 6 (lower is better)
Translates to: ASPGGLGLATLA*SLPIVCPSHVT
Trigger: GGTCACATGTGAAGGGCATACAATGGGCAAAGACAAGGCCAGAGTGGCCAGGCCCAATCCTCCAGGACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 72 bp AAAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTaGAGCCCTGATGCAGCCACAGCAGCCTGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: KSVYWPLPSSIV*SPDAATAACGE
Trigger: CTCCCCACAGGCTGCTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS TCA 72 bp CAGGATGACCCCAGCCCATGGCTGCAGTGGATATCCTaGGGGTCACCTCATGGCAGGTGGTATGTTCATCTT +
Preference number: 6 (lower is better)
Translates to: QDDPSPWLQWIS*GSPHGRWYVHL
Trigger: AAGATGAACATACCACCTGCCATGAGGTGACCCTCAGGATATCCACTGCAGCCATGGGCTGGGGTCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509749.1
CDS GCA 72 bp TTGGTGAAGTACTTCCTATTAGTGCCAATAACCTTCTaGACAGCACACACGTTGGGGCCGTGCTGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: LVKYFLLVPITF*TAHTLGPCWRP
Trigger: GGGCCGCCAGCACGGCCCCAACGTGTGTGCTGTGCAGAAGGTTATTGGCACTAATAGGAAGTACTTCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
CDS GCA 72 bp TCCTTGAATCAAGGCAAAAACCCTGACAGGGCAGCCTaGCTCCACTTCCTCCTGAGCAGTCCTTGCCAAGAG +
Preference number: 6 (lower is better)
Translates to: SLNQGKNPDRAA*LHFLLSSPCQE
Trigger: CTCTTGGCAAGGACTGCTCAGGAGGAAGTGGAGGCAGGCTGCCCTGTCAGGGTTTTTGCCTTGATTCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp CCCATGGCTGCAGTGGATATCCTGAGGGTCACCTCATaGCAGGTGGTATGTTCATCTTGGACCAGAGCAGGT +
Preference number: 6 (lower is better)
Translates to: PMAAVDILRVTS*QVVCSSWTRAG
Trigger: ACCTGCTCTGGTCCAAGATGAACATACCACCTGCCATGAGGTGACCCTCAGGATATCCACTGCAGCCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509749.1
CDS CAA 72 bp CCTGAGGGTCACCTCATGGCAGGTGGTATGTTCATCTaGGACCAGAGCAGGTCTTGGGCTCAATCTAGCTGC +
Preference number: 6 (lower is better)
Translates to: PEGHLMAGGMFI*DQSRSWAQSSC
Trigger: GCAGCTAGATTGAGCCCAAGACCTGCTCTGGTCCAAGATGAACATACCACCTGCCATGAGGTGACCCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509749.1
CDS CAA 90 bp CCGCCAGACAAAGGTGAGTCTGTCTGCTGTGCCTACACTCATGGCTaGCAGCCCTCCTCACACTGTCACTCGACAGTTACTGGTAATCAC +
Preference number: 6 (lower is better)
Translates to: PPDKGESVCCAYTHG*QPSSHCHSTVTGNH
Trigger: GTGATTACCAGTAACTGTCGAGTGACAGTGTGAGGAGGGCTGCAAGCCATGAGTGTAGGCACAGCAGACAGACTCACCTTTGTCTGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS TCA 72 bp TTCAACTGCACTGGAGGCAAGGAACATACACTGAGGTaGGATGCTGTAAGAGGAGTGCTGGGAATCGCGCGG +
Preference number: 6 (lower is better)
Translates to: FNCTGGKEHTLR*DAVRGVLGIAR
Trigger: CCGCGCGATTCCCAGCACTCCTCTTACAGCATCTCACCTCAGTGTATGTTCCTTGCCTCCAGTGCAGTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS TCA 72 bp CAGAGCAGTCAGAAGCCAGGCTGGAAATCAGACCCTTaGCTTCTGTGTCCACACTGGTGGCTTCTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: QSSQKPGWKSDP*LLCPHWWLLCC
Trigger: ACAGCAGAGAAGCCACCAGTGTGGACACAGAAGTCAAGGGTCTGATTTCCAGCCTGGCTTCTGACTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS TCA 72 bp GCAGATCAAAAGCCACCTCCTCCAGAGAGAACTCCCTaGCTTTCCAATCCTCCCTGCACTACTGTCACTCCC +
Preference number: 6 (lower is better)
Translates to: ADQKPPPPERTP*LSNPPCTTVTP
Trigger: GGGAGTGACAGTAGTGCAGGGAGGATTGGAAAGTCAGGGAGTTCTCTCTGGAGGAGGTGGCTTTTGATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS TCA 72 bp GGAGGGCCCAGAGGAGAAGATGTAAGTGGTCACCCCTaGAATGAAGAACTCCCTGCCCAGGGAATAAGCACT +
Preference number: 6 (lower is better)
Translates to: GGPRGEDVSGHP*NEELPAQGIST
Trigger: AGTGCTTATTCCCTGGGCAGGGAGTTCTTCATTTCAGGGGTGACCACTTACATCTTCTCCTCTGGGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513497.1
CDS GCA 72 bp TCACGTGCTGCCAACTATGTGGGAACATCATTTTCTTaGAGACCCCCGTCCCGAAGGGTCTCAAAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: SRAANYVGTSFS*RPPSRRVSKVS
Trigger: GGACACCTTTGAGACCCTTCGGGACGGGGGTCTGCAAGAAAATGATGTTCCCACATAGTTGGCAGCACGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506699.5
CDS GCA 72 bp AACCAGCCCACACATGGAACAGAAATGGGTTCATTATaGACCAAGGGCCATGCAGTATGGCTGGGGATCCCC +
Preference number: 6 (lower is better)
Translates to: NQPTHGTEMGSL*TKGHAVWLGIP
Trigger: GGGGATCCCCAGCCATACTGCATGGCCCTTGGTGCATAATGAACCCATTTCTGTTCCATGTGTGGGCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp AAGGTGAGTCTGTCTGCTGTGCCTACACTCATGGCTTaGAGCCCTCCTCACACTGTCACTCGACAGTTACTG +
Preference number: 6 (lower is better)
Translates to: KVSLSAVPTLMA*SPPHTVTRQLL
Trigger: CAGTAACTGTCGAGTGACAGTGTGAGGAGGGCTGCAAGCCATGAGTGTAGGCACAGCAGACAGACTCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp ATCTTGGACCAGAGCAGGTCTTGGGCTCAATCTAGCTaGACAAATGAGGCAGCAGCAGGAGCCAAAGGATGC +
Preference number: 6 (lower is better)
Translates to: ILDQSRSWAQSS*TNEAAAGAKGC
Trigger: GCATCCTTTGGCTCCTGCTGCTGCCTCATTTGTGCAGCTAGATTGAGCCCAAGACCTGCTCTGGTCCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509749.1
CDS CCA 72 bp AATAGAGGGCCCAAGGAGAAGCAGGCACAAAGAGGGTaGGTTGTCTACAGCTTAAACCCCAGAAACCAGCCC +
Preference number: 6 (lower is better)
Translates to: NRGPKEKQAQRG*VVYSLNPRNQP
Trigger: GGGCTGGTTTCTGGGGTTTAAGCTGTAGACAACCCACCCTCTTTGTGCCTGCTTCTCCTTGGGCCCTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp ATTTATTCTAGTACCCCATGTGGGAACTGCCACCTCTaGAAGCCACAGTGCAGGTCCAGGGCTCAGAGGACA +
Preference number: 6 (lower is better)
Translates to: IYSSTPCGNCHL*KPQCRSRAQRT
Trigger: TGTCCTCTGAGCCCTGGACCTGCACTGTGGCTTCCAGAGGTGGCAGTTCCCACATGGGGTACTAGAATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp CTGAGGGTCACCTCATGGCAGGTGGTATGTTCATCTTaGACCAGAGCAGGTCTTGGGCTCAATCTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: LRVTSWQVVCSS*TRAGLGLNLAA
Trigger: TGCAGCTAGATTGAGCCCAAGACCTGCTCTGGTCCAAGATGAACATACCACCTGCCATGAGGTGACCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509749.1
CDS CCA 72 bp ATGACCACAAATCTGCCCCAGCAGTCAGTTGGCCTCTaGGTTAAATATGCTGTCTGGGATGCTGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: MTTNLPQQSVGL*VKYAVWDAGLP
Trigger: AGGGAGCCCAGCATCCCAGACAGCATATTTAACCCAGAGGCCAACTGACTGCTGGGGCAGATTTGTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513497.1
CDS CCA 72 bp CTTCCCGTTGATAGTGAGCATGTCTCTCAGGGCTTCTaGGTCGCCCAGGATACGGTTCAAAGTCTCACTAGG +
Preference number: 6 (lower is better)
Translates to: LPVDSEHVSQGF*VAQDTVQSLTR
Trigger: CCTAGTGAGACTTTGAACCGTATCCTGGGCGACCCAGAAGCCCTGAGAGACATGCTCACTATCAACGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508767.5
CDS CAA 72 bp TGGTGGATCCAACGACTCCCAGGGTCTCGTAAAGGTTaGAGAGTGGTAGGGCTGCAGGAGCAGAAGACAGAA +
Preference number: 6 (lower is better)
Translates to: WWIQRLPGSRKG*RVVGLQEQKTE
Trigger: TTCTGTCTTCTGCTCCTGCAGCCCTACCACTCTCAAACCTTTACGAGACCCTGGGAGTCGTTGGATCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp CACATGAGGAGAGGCAGGACTGAGGTTCAACTGCACTaGAGGCAAGGAACATACACTGAGGTGAGATGCTGT +
Preference number: 6 (lower is better)
Translates to: HMRRGRTEVQLH*RQGTYTEVRCC
Trigger: ACAGCATCTCACCTCAGTGTATGTTCCTTGCCTCCAGTGCAGTTGAACCTCAGTCCTGCCTCTCCTCATGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS CCA 72 bp ACTTCTGTGTCCACACTGGTGGCTTCTCTGCTGTTCTaGGCTCCAAGAGAACATGCGTATGGTTGGAACCAG +
Preference number: 6 (lower is better)
Translates to: TSVSTLVASLLF*APREHAYGWNQ
Trigger: CTGGTTCCAACCATACGCATGTTCTCTTGGAGCCCAGAACAGCAGAGAAGCCACCAGTGTGGACACAGAAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CCA 72 bp GCAGGTGGTATGTTCATCTTGGACCAGAGCAGGTCTTaGGCTCAATCTAGCTGCACAAATGAGGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: AGGMFILDQSRS*AQSSCTNEAAA
Trigger: TGCTGCTGCCTCATTTGTGCAGCTAGATTGAGCCCAAGACCTGCTCTGGTCCAAGATGAACATACCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509749.1
CDS CAA 72 bp TTCACGTGCTGCCAACTATGTGGGAACATCATTTTCTaGCAGACCCCCGTCCCGAAGGGTCTCAAAGGTGTC +
Preference number: 6 (lower is better)
Translates to: FTCCQLCGNIIF*QTPVPKGLKGV
Trigger: GACACCTTTGAGACCCTTCGGGACGGGGGTCTGCAAGAAAATGATGTTCCCACATAGTTGGCAGCACGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506699.5
CDS CAA 72 bp AAAGGTGAGTCTGTCTGCTGTGCCTACACTCATGGCTaGCAGCCCTCCTCACACTGTCACTCGACAGTTACT +
Preference number: 6 (lower is better)
Translates to: KGESVCCAYTHG*QPSSHCHSTVT
Trigger: AGTAACTGTCGAGTGACAGTGTGAGGAGGGCTGCAAGCCATGAGTGTAGGCACAGCAGACAGACTCACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp TCCGCCTCACTCCCACTTGTATCCTTTGTGGTTAGGAAGTTCTCCTaGAATCAAGGCAAAAACCCTGACAGGGCAGCCTGCCTCCACTTC +
Preference number: 6 (lower is better)
Translates to: SASLPLVSFVVRKFS*NQGKNPDRAACLHF
Trigger: GAAGTGGAGGCAGGCTGCCCTGTCAGGGTTTTTGCCTTGATTCAAGGAGAACTTCCTAACCACAAAGGATACAAGTGGGAGTGAGGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 90 bp AGTGGATATCCTGAGGGTCACCTCATGGCAGGTGGTATGTTCATCTaGGACCAGAGCAGGTCTTGGGCTCAATCTAGCTGCACAAATGAG +
Preference number: 6 (lower is better)
Translates to: SGYPEGHLMAGGMFI*DQSRSWAQSSCTNE
Trigger: CTCATTTGTGCAGCTAGATTGAGCCCAAGACCTGCTCTGGTCCAAGATGAACATACCACCTGCCATGAGGTGACCCTCAGGATATCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509749.1
CDS TCA 72 bp TCAAGCGCAGAGTCTGCAAGTTCATCCCCTCTTTCCTaGGGTCTGTTGGCTGAAGAGGAAAGAAAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: SSAESASSSPLS*GLLAEEERKGR
Trigger: CCTGCCTTTTCTTTCCTCTTCAGCCAACAGACCTCAGGAAAGAGGGGATGAACTTGCAGACTCTGCGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS TCA 72 bp AAAGCGTGTACTGGCCGTTACCTTCAAGCATCGTGTTaGGCCCTGATGCAGCCACAGCAGCCAAATCTAAAC +
Preference number: 6 (lower is better)
Translates to: KACTGRYLQASC*ALMQPQQPNLN
Trigger: GTTTAGATTTGGCTGCTGTGGCTGCATCAGGGCTCAACACGATGCTTGAAGGTAACGGCCAGTACACGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506699.5
CDS CAA 72 bp GCTAGGATGTCTTTATTGGAGATGATCGCCTTCCCGTaGATAGTGAGCATGTCTCTCAGGGCTTCTGGGTCG +
Preference number: 6 (lower is better)
Translates to: ARMSLLEMIAFP*IVSMSLRASGS
Trigger: CGACCCAGAAGCCCTGAGAGACATGCTCACTATCAACGGGAAGGCGATCATCTCCAATAAAGACATCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508767.5
CDS TCA 72 bp AAGAAAGGTGAATGCACACATGAGGAGAGGCAGGACTaGGGTTCAACTGCACTGGAGGCAAGGAACATACAC +
Preference number: 6 (lower is better)
Translates to: KKGECTHEERQD*GSTALEARNIH
Trigger: GTGTATGTTCCTTGCCTCCAGTGCAGTTGAACCTCAGTCCTGCCTCTCCTCATGTGTGCATTCACCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS TCA 72 bp CAGCCACAGCAGCCAAATCTAAACAGTAAGAGGAGGTaGTGCAAAGGGATCAATTGCTGTTCACGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: QPQQPNLNSKRR*CKGINCCSRAA
Trigger: GGCAGCACGTGAACAGCAATTGATCCCTTTGCATCACCTCCTCTTACTGTTTAGATTTGGCTGCTGTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506699.5
CDS TCA 72 bp TCCCACTTGTATCCTTTGTGGTTAGGAAGTTCTCCTTaGATCAAGGCAAAAACCCTGACAGGGCAGCCTGCC +
Preference number: 6 (lower is better)
Translates to: SHLYPLWLGSSP*IKAKTLTGQPA
Trigger: GGCAGGCTGCCCTGTCAGGGTTTTTGCCTTGATTCAAGGAGAACTTCCTAACCACAAAGGATACAAGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp TTAAGGAGAAAGCTTCCTGAAACAGTAGGAAATGACTaGAGACTCCCATTCATCATGCCCACCCCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: LRRKLPETVGND*RLPFIMPTPRG
Trigger: TCCCCGAGGGGTGGGCATGATGAATGGGAGTCTGCAGTCATTTCCTACTGTTTCAGGAAGCTTTCTCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506699.5
ENST00000515433.1
CDS GCA 72 bp ATGAATTCTCCATGTTCAAGGGCATTCAGGGGAACCTaGTCTATGTTCCCCTACAGGAGCCATCCTCTACCT +
Preference number: 6 (lower is better)
Translates to: MNSPCSRAFRGT*SMFPYRSHPLP
Trigger: AGGTAGAGGATGGCTCCTGTAGGGGAACATAGAGCAGGTTCCCCTGAATGCCCTTGAACATGGAGAATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp TCACGTGCTGCCAACTATGTGGGAACATCATTTTCTTaGAGACCCCCGTCCTTCGAGCAACCCAGAAGAAAA +
Preference number: 6 (lower is better)
Translates to: SRAANYVGTSFS*RPPSFEQPRRK
Trigger: TTTTCTTCTGGGTTGCTCGAAGGACGGGGGTCTGCAAGAAAATGATGTTCCCACATAGTTGGCAGCACGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS GCA 72 bp CAATCCTCCCTGCACTACTGTCACTCCCGATTTACCTaGCCACTTGACATAAATTATCACAGCCCCTGGCTA +
Preference number: 6 (lower is better)
Translates to: QSSLHYCHSRFT*PLDINYHSPWL
Trigger: TAGCCAGGGGCTGTGATAATTTATGTCAAGTGGGCAGGTAAATCGGGAGTGACAGTAGTGCAGGGAGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 72 bp CTCCCACTTGTATCCTTTGTGGTTAGGAAGTTCTCCTaGAATCAAGGCAAAAACCCTGACAGGGCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: LPLVSFVVRKFS*NQGKNPDRAAC
Trigger: GCAGGCTGCCCTGTCAGGGTTTTTGCCTTGATTCAAGGAGAACTTCCTAACCACAAAGGATACAAGTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 72 bp TTCACGTGCTGCCAACTATGTGGGAACATCATTTTCTaGCAGACCCCCGTCCTTCGAGCAACCCAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: FTCCQLCGNIIF*QTPVLRATQKK
Trigger: TTTCTTCTGGGTTGCTCGAAGGACGGGGGTCTGCAAGAAAATGATGTTCCCACATAGTTGGCAGCACGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS TCA 72 bp GCCCAGAGGAGAAGATGTAAGTGGTCACCCCTGAAATaGAGAACTCCCTGCCCAGGGAATAAGCACTTATTA +
Preference number: 6 (lower is better)
Translates to: AQRRRCKWSPLK*RTPCPGNKHLL
Trigger: TAATAAGTGCTTATTCCCTGGGCAGGGAGTTCTTCATTTCAGGGGTGACCACTTACATCTTCTCCTCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513497.1
CDS GCA 72 bp ACTCGACAGTTACTGGTAATCACGTACATGAGCCCATaGATGGAAGGATCACACCACCCATTCTCTACACAG +
Preference number: 6 (lower is better)
Translates to: TRQLLVITYMSP*MEGSHHPFSTQ
Trigger: CTGTGTAGAGAATGGGTGGTGTGATCCTTCCATGCATGGGCTCATGTACGTGATTACCAGTAACTGTCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 72 bp TTGATAGACAGGGGCCTGGAAAACGCTGATGCTTGTTaGAAGATCTCAAGCGCAGAGTCTGCAAGTTCATCC +
Preference number: 6 (lower is better)
Translates to: LIDRGLENADAC*KISSAESASSS
Trigger: GGATGAACTTGCAGACTCTGCGCTTGAGATCTTCAAACAAGCATCAGCGTTTTCCAGGCCCCTGTCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503087.1
CDS CAA 72 bp CAGGATGTTGGCAAGTTCCTTGGCATCTCCTGCAGGTaGCGGGAAAAGGAGATAGAGTTAATCCCAAGAATG +
Preference number: 6 (lower is better)
Translates to: QDVGKFLGISCR*REKEIELIPRM
Trigger: CATTCTTGGGATTAACTCTATCTCCTTTTCCCGCAACCTGCAGGAGATGCCAAGGAACTTGCCAACATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513497.1
CDS GCA 72 bp GAGGTGATGCAAAGGGATCAATTGCTGTTCACGTGCTaGCAACTATGTGGGAACATCATTTTCTTGCAGACC +
Preference number: 6 (lower is better)
Translates to: EVMQRDQLLFTC*QLCGNIIFLQT
Trigger: GGTCTGCAAGAAAATGATGTTCCCACATAGTTGGCAGCACGTGAACAGCAATTGATCCCTTTGCATCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506699.5
ENST00000515433.1
CDS GCA 72 bp GAGGAGGTGATGCAAAGGGATCAATTGCTGTTCACGTaGTGCCAACTATGTGGGAACATCATTTTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: EEVMQRDQLLFT*CQLCGNIIFLQ
Trigger: CTGCAAGAAAATGATGTTCCCACATAGTTGGCAGCACGTGAACAGCAATTGATCCCTTTGCATCACCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506699.5
ENST00000515433.1
CDS CCA 72 bp GGCACTTTATATCAGGGACTTGAACATCTGAGGATATaGCATCCTAGAATGGGTCCTAGAATCAATCCCCCG +
Preference number: 6 (lower is better)
Translates to: GTLYQGLEHLRI*HPRMGPRINPP
Trigger: CGGGGGATTGATTCTAGGACCCATTCTAGGATGCCATATCCTCAGATGTTCAAGTCCCTGATATAAAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504185.5
CDS CCA 72 bp CTTCCACTAAAATATCATTTCTTTGGGAGGTCAACTTaGCACACTTCCCACCCCATCTCACCGCCAGACAAA +
Preference number: 6 (lower is better)
Translates to: LPLKYHFFGRST*HTSHPISPPDK
Trigger: TTTGTCTGGCGGTGAGATGGGGTGGGAAGTGTGCCAAGTTGACCTCCCAAAGAAATGATATTTTAGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 72 bp TCTTCCACTAAAATATCATTTCTTTGGGAGGTCAACTaGGCACACTTCCCACCCCATCTCACCGCCAGACAA +
Preference number: 6 (lower is better)
Translates to: SSTKISFLWEVN*AHFPPHLTARQ
Trigger: TTGTCTGGCGGTGAGATGGGGTGGGAAGTGTGCCAAGTTGACCTCCCAAAGAAATGATATTTTAGTGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515433.1
CDS CAA 72 bp AAGGACTGGTTATACTTCCACGAGGGGCCTCCTGATTaGTTCAGAGCATGTAGCAGGGTCATTATCCATGAA +
Preference number: 6 (lower is better)
Translates to: KDWLYFHEGPPD*FRACSRVIIHE
Trigger: TTCATGGATAATGACCCTGCTACATGCTCTGAACAAATCAGGAGGCCCCTCGTGGAAGTATAACCAGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514242.5
CDS CAA 90 bp AGAGAAAGAAAGGACTGGTTATACTTCCACGAGGGGCCTCCTGATTaGTTCAGAGCATGTAGCAGGGTCATTATCCATGAAGATGAAGGA +
Preference number: 6 (lower is better)
Translates to: RERKDWLYFHEGPPD*FRACSRVIIHEDEG
Trigger: TCCTTCATCTTCATGGATAATGACCCTGCTACATGCTCTGAACAAATCAGGAGGCCCCTCGTGGAAGTATAACCAGTCCTTTCTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514242.5
CDS CCA 72 bp ATAACAACCGTGACTGAGGGGCACTGGTGGGCTTTCTaGCTCACATTTCCAAAGACATGTTTTCTCCATAAT +
Preference number: 6 (lower is better)
Translates to: ITTVTEGHWWAF*LTFPKTCFLHN
Trigger: ATTATGGAGAAAACATGTCTTTGGAAATGTGAGCCAGAAAGCCCACCAGTGCCCCTCAGTCACGGTTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504411.1
CDS CAA 72 bp TGTGGTTCCGAAGCAAATTCCTTGTATGGGCATCAATaGGAGGGGTTCCATCTACAAGAAAGGGTGATGGTT +
Preference number: 6 (lower is better)
Translates to: CGSEANSLYGHQ*EGFHLQERVMV
Trigger: AACCATCACCCTTTCTTGTAGATGGAACCCCTCCAATTGATGCCCATACAAGGAATTTGCTTCGGAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5
CDS TCA 72 bp AGTGGTAGGGCACTTTATATCAGGGACTTGAACATCTaGGGATATGGCATCCTAGAATGGGTCCTAGAATCA +
Preference number: 6 (lower is better)
Translates to: SGRALYIRDLNI*GYGILEWVLES
Trigger: TGATTCTAGGACCCATTCTAGGATGCCATATCCTCAGATGTTCAAGTCCCTGATATAAAGTGCCCTACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504185.5
CDS CAA 90 bp ACTGTTGATTTGCCACAGATTTTCCTTTGGTACCACTGCTTGCAGTaGGTGAAGTACTTCCTATTAGTGCCAATAACCTTCTGCACAGCA +
Preference number: 6 (lower is better)
Translates to: TVDLPQIFLWYHCLQ*VKYFLLVPITFCTA
Trigger: TGCTGTGCAGAAGGTTATTGGCACTAATAGGAAGTACTTCACCAACTGCAAGCAGTGGTACCAAAGGAAAATCTGTGGCAAATCAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
CDS CAA 90 bp CTGATGACTGTTGATTTGCCACAGATTTTCCTTTGGTACCACTGCTaGCAGTTGGTGAAGTACTTCCTATTAGTGCCAATAACCTTCTGC +
Preference number: 6 (lower is better)
Translates to: LMTVDLPQIFLWYHC*QLVKYFLLVPITFC
Trigger: GCAGAAGGTTATTGGCACTAATAGGAAGTACTTCACCAACTGCAAGCAGTGGTACCAAAGGAAAATCTGTGGCAAATCAACAGTCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
CDS GCA 72 bp ACTGTTGATTTGCCACAGATTTTCCTTTGGTACCACTaGTTGCAGTTGGTGAAGTACTTCCTATTAGTGCCA +
Preference number: 6 (lower is better)
Translates to: TVDLPQIFLWYH*LQLVKYFLLVP
Trigger: TGGCACTAATAGGAAGTACTTCACCAACTGCAAGCAGTGGTACCAAAGGAAAATCTGTGGCAAATCAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
CDS CCA 72 bp CCAGGATTTCATCACCAATGTGGTATTTCAGGATGTTaGCAAGTTCCTTGGCATCTCAATCTGTCTAATGGT +
Preference number: 6 (lower is better)
Translates to: PGFHHQCGISGC*QVPWHLNLSNG
Trigger: ACCATTAGACAGATTGAGATGCCAAGGAACTTGCCAACATCCTGAAATACCACATTGGTGATGAAATCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508076.5
CDS CAA 72 bp GTTGATTTGCCACAGATTTTCCTTTGGTACCACTGCTaGCAGTTGGTGAAGTACTTCCTATTAGTGCCAATA +
Preference number: 6 (lower is better)
Translates to: VDLPQIFLWYHC*QLVKYFLLVPI
Trigger: TATTGGCACTAATAGGAAGTACTTCACCAACTGCAAGCAGTGGTACCAAAGGAAAATCTGTGGCAAATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442011.7
ENST00000504185.5
ENST00000506699.5
ENST00000507018.5
CDS CCA 72 bp TCTTTAATTATGTGGTTCCGAAGCAAATTCCTTGTATaGGCATCAATTGGAGGGGTTCCATCTACAAGAAAG +
Preference number: 6 (lower is better)
Translates to: SLIMWFRSKFLV*ASIGGVPSTRK
Trigger: CTTTCTTGTAGATGGAACCCCTCCAATTGATGCCCATACAAGGAATTTGCTTCGGAACCACATAATTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509485.5