RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGFB1I1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140682

Ensembl transcript IDs: ENST00000361773.7, ENST00000394858.6, ENST00000394863.8, ENST00000561785.5, ENST00000562165.5, ENST00000562566.5, ENST00000563712.6, ENST00000564176.5, ENST00000564804.1, ENST00000565360.5, ENST00000565454.5, ENST00000567066.6, ENST00000567524.1, ENST00000567607.5, ENST00000568142.2, ENST00000569254.5, ENST00000569703.5

Found 773 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACCCAGGGCCGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTaGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACA +
Preference number: 1 (lower is better)
Translates to: DPGPTRSGRSQGGHT*RTASRVVRGSGSRT
Trigger: TGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCGGCCCTGGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 90 bp TTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTaGAAGCGGCGACCCAGGGCCGACACGCAGCGGCCGGTCACAGGG +
Preference number: 1 (lower is better)
Translates to: LVSGRRQKVHVKWSG*KRRPRADTQRPVTG
Trigger: CCCTGTGACCGGCCGCTGCGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCTCACCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 90 bp AAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGACCCAGGGCCGACACGCAGCGGCCG +
Preference number: 1 (lower is better)
Translates to: KDPLVSGRRQKVHVK*SGWKRRPRADTQRP
Trigger: CGGCCGCTGCGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 90 bp AGGCCTTTGGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTaGAGCAGCCCCAGCATGGTGTCTAGGCTGCCCTTGCCAGTCGGC +
Preference number: 1 (lower is better)
Translates to: RPLAWVGTPRRLRSD*SSPSMVSRLPLPVG
Trigger: GCCGACTGGCAAGGGCAGCCTAGACACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 90 bp CCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCAGCAATAGGT +
Preference number: 1 (lower is better)
Translates to: PPRAVEQPPQTKCSG*QARPRAVTTCPAIG
Trigger: ACCTATTGCTGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 90 bp CCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTaGTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTG +
Preference number: 1 (lower is better)
Translates to: PRRAWKWFSHNGRPS*SKKLPPEKGAKHSL
Trigger: CAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCACGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 90 bp GAGGGTGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTaGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGG +
Preference number: 1 (lower is better)
Translates to: EGAGSKDVLAWPPIR*NCKDPPPVRGLPQG
Trigger: CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
3UTR GCA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTaGAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGGGAA +
Preference number: 1 (lower is better)
Translates to: AGSKDVLAWPPIRWN*KDPPPVRGLPQGWE
Trigger: TTCCCACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR GCA 90 bp AGCACTCGGGGCAGAAGGGGGCTCCATCCTTCTCGAAGAAGCTGCTaGCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGG +
Preference number: 1 (lower is better)
Translates to: STRGRRGLHPSRRSC*LPGRWNSLRKRSAR
Trigger: CCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGGATGGAGCCCCCTTCTGCCCCGAGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 90 bp TGCCCAGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: CPAIGLLQEPQRPLA*VGTPRRLRSDCSSP
Trigger: GGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR TCA 90 bp CGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTATCCAGGATGGGGCCCTGGCAGCCCT +
Preference number: 1 (lower is better)
Translates to: RSIPCRRNSPGARAR*APRCSYPGWGPGSP
Trigger: AGGGCTGCCAGGGCCCCATCCTGGATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 90 bp TGCCCTTGCCAGTCGGCTCTGGTGGGGATGGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCTGAGTTGGCCCAGAGGCTGGAAGAT +
Preference number: 1 (lower is better)
Translates to: CPCQSALVGMGSPHL*SSPPVAELAQRLED
Trigger: ATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 90 bp AGTAGCACTCGGGGCAGAAGGGGGCTCCATCCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCT +
Preference number: 1 (lower is better)
Translates to: SSTRGRRGLHPSRRS*CLPGRWNSLRKRSA
Trigger: AGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGGATGGAGCCCCCTTCTGCCCCGAGTGCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR TCA 90 bp AAGGGCTCCCCGCAACTGACGCAGCAGAAATGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTTG +
Preference number: 1 (lower is better)
Translates to: KGSPQLTQQKCSGCQ*VPKAVTILCRMGWL
Trigger: CAACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 90 bp AGTGCACAGAACAGTGAGGGTGCAGGGAGCAAGGACGTCCTGGCCTaGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGG +
Preference number: 1 (lower is better)
Translates to: SAQNSEGAGSKDVLA*PPIRWNCKDPPPVR
Trigger: CCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACCCTCACTGTTCTGTGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
3UTR GCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTaGAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCG +
Preference number: 1 (lower is better)
Translates to: RVGIEWRPAREFLSV*NPLCGRVGLGLAGP
Trigger: CGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CCA 90 bp GGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGGGAATAGAGTaGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGT +
Preference number: 1 (lower is better)
Translates to: GPSPSKGAPSRVGIE*RPAREFLSVCNPLC
Trigger: ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CCA 90 bp GAAAAAGTGCACAGAACAGTGAGGGTGCAGGGAGCAAGGACGTCCTaGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAG +
Preference number: 1 (lower is better)
Translates to: EKVHRTVRVQGARTS*PGLRFAGIARTLPQ
Trigger: CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACCCTCACTGTTCTGTGCACTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
3UTR CCA 90 bp GGTCACCATCTTGTGTCGGATGGGCTGGTTGCAGAAGCCACATCTTaGCGAGAAGCGCTCAAAGTAGCACTCGGGGCAGAAGGGGGCTCC +
Preference number: 1 (lower is better)
Translates to: GHHLVSDGLVAEATS*REALKVALGAEGGS
Trigger: GGAGCCCCCTTCTGCCCCGAGTGCTACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCAACCAGCCCATCCGACACAAGATGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 90 bp CTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGAT +
Preference number: 1 (lower is better)
Translates to: LISEGLPATDAAEML*VPVSAQGGHHLVSD
Trigger: ATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 90 bp GTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGAC +
Preference number: 1 (lower is better)
Translates to: VEARTGVLVCVQSTL*ACGFRSGWAVSELD
Trigger: GTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CCA 90 bp GGAGACGGGCTGGAAGGGAGGCTGGGTCTTTTCTTATCTTCAGACTaGTCCTCCTTCTGCTCTCCTGAAGCCACCTTGCTAGATGGGAAC +
Preference number: 1 (lower is better)
Translates to: GDGLEGRLGLFLSSD*SSFCSPEATLLDGN
Trigger: GTTCCCATCTAGCAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAGCCCGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR TCA 90 bp GCTGGGTCTTTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCTCCTaGAGCCACCTTGCTAGATGGGAACTGAGACATGATTTCATCTGT +
Preference number: 1 (lower is better)
Translates to: AGSFLIFRLVLLLLS*SHLARWELRHDFIC
Trigger: ACAGATGAAATCATGTCTCAGTTCCCATCTAGCAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567066.6
3UTR-3UTR TCA 90 bp GGGCCGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCTCACCACCGGTGGCTaGGTTGGCCCAGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: GPTRSGRSQGGHTWRTASLTTGG*VGPEAG
Trigger: TCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAG...GCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp TTGCCGGCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCGCGGGGCGAACAGCTaGAGGAAGTCCCGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: LPARSWKDPLVSGRRQKVRGANS*RKSRRQ
Trigger: CTGCCGCCGGGACTTCCTGCAGCTGTTCGCCCCGCG...CACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GGCCGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCTGCCTCCCAGGGCGGTaGAACAGCCTCCGCAAACGA +
Preference number: 2 (lower is better)
Translates to: GRHAAAGHREATRGAQRACLPGR*NSLRKR
Trigger: TCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCA...GGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GCCTTTGGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAAGGCCTCGGGGTCTaGAGGACCCGGCTTTTCCGG +
Preference number: 2 (lower is better)
Translates to: AFGLGGNTPAAEVGLQQPQGLGV*RTRLFR
Trigger: CCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTG...GGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000564804.1
3UTR-3UTR CCA 90 bp GGCGAACAGCTGCAGGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTGGGTGGCAGAAGCCTTTaGGAGGCCAGGAGACGGGCT +
Preference number: 2 (lower is better)
Translates to: GEQLQEVPAAVGAALALVGGRSL*EARRRA
Trigger: AGCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACC...CACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCCTGCAGCTGTTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR-3UTR GCA 90 bp GGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGCGGCTGAGGTCGGACTaGAGCAGCCCCAGCATGGTG +
Preference number: 2 (lower is better)
Translates to: GHREATRGAQRAASCVEVRLRSD*SSPSMV
Trigger: CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCG...CACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp GCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTGAGCGCCACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: AKHSLQTKQSGCQSALSATKCSG*QARPRA
Trigger: GGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGT...GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADTKCSG*QARPRA
Trigger: GGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGT...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GGGCGAACAGCTGCAGGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTCGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 2 (lower is better)
Translates to: GRTAAGSPGGSRGGPRARRLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...ACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCCTGCAGCTGTTCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCCTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 2 (lower is better)
Translates to: ANEVLGVPGAAQSRHHLPLASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...GGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GCCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCCTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 2 (lower is better)
Translates to: ASQGGGTASANEVLGVPGLASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...GCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGCAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: ARSWKDPLVSGRRQKVHVQRPLA*VGTPRR
Trigger: CCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTG...CACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp CAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACCAGCCACAGAGGCCTTTaGCCTGGGTGGGAACACCCC +
Preference number: 2 (lower is better)
Translates to: QPPQTKCSGCQARPRAVTSHRGL*PGWEHP
Trigger: GGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCT...GGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR TCA 90 bp GGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTTGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACC +
Preference number: 2 (lower is better)
Translates to: GRAERAVSRRASGSRAGSCSGCQ*VPKAVT
Trigger: GGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCA...ACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR TCA 90 bp AGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTGCTCGATGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACC +
Preference number: 2 (lower is better)
Translates to: SRVVRGSGSRTTGGPRARCSGCQ*VPKAVT
Trigger: GGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCA...TCGAGCACGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp CCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCGCATGGTGTCTAGGCTaGCCTTGCCAGTCGGCTCTG +
Preference number: 2 (lower is better)
Translates to: PGRWNSLRKRSARGARRGAWCLG*PCQSAL
Trigger: CAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGC...GCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp CGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTCCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: RSQGGHTWRTASRVVRGSPSRRS*CLPGRW
Trigger: CCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGG...ACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGGAGCAAGGACGTCCTaGCCTGGCCTCCGATTCGCT +
Preference number: 2 (lower is better)
Translates to: GHREATRGAQRAASCVEVGARTS*PGLRFA
Trigger: AGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC...CACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564804.1
3UTR-3UTR TCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCTGGGGCCTCCCGCTCTaGGAGCAAGGCCTCGGGGTC +
Preference number: 2 (lower is better)
Translates to: GARTSWPGLRFAGIARTLWGLPL*EQGLGV
Trigger: GACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCA...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR TCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGTGGGGCCTCCCGCTCTaGGAGCAAGGCCTCGGGGTC +
Preference number: 2 (lower is better)
Translates to: RPGLASDSLELQGPSPSKWGLPL*EQGLGV
Trigger: GACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCA...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR GCA 90 bp CGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTCTGGGTGCCAGTGAGTaGCCAAGGCGGTCACCATCT +
Preference number: 2 (lower is better)
Translates to: RSQGGHTWRTASRVVRGSLGASE*PRRSPS
Trigger: AGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG...ACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp AGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTGGAAACCCTCATCTCCGACGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 2 (lower is better)
Translates to: SPGGSRGGPRARGNPHLRRLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...TCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp CAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACACGCTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 2 (lower is better)
Translates to: QKVHVKWSGWKRRPRADTLASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...CGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CAA 90 bp GGCTGCCCTTGCCAGTCGGCTCTGGTGGGGATGGGGAGCCCTCATTaGTGGAGCTCACCACCGGTGGCTGAGTTGGCCCAGAGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: GCPCQSALVGMGSPH*WSSPPVAELAQRLE
Trigger: TTCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR TCA 90 bp CGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCAGGGCTCCCCGCAACTaGCGCAGCAGAAATGCTCTG +
Preference number: 2 (lower is better)
Translates to: RRQKVHVKWSGWKRRPRARAPRN*RSRNAL
Trigger: CAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCT...GGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR TCA 90 bp GCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTAT +
Preference number: 2 (lower is better)
Translates to: ARSWKDPLVSGRRQKVHVGARAR*APRCSY
Trigger: ATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACC...CACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp GTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTTGCAACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: VPVSAQGGHHLVSDGLVATKCSG*QARPRA
Trigger: GGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGT...TGCAACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GCGGCCCTCGCGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACAGGGTGGGAATAGAGTaGAGGCCCGCACGGGAGTTC +
Preference number: 2 (lower is better)
Translates to: AALALVETLISEGLPATDRVGIE*RPAREF
Trigger: GAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT...GTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564804.1
3UTR-3UTR CCA 90 bp GGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTGGAAACCCTCATCTCAAGGACGTCCTGGCCTaGCCTCCGATTCGCTGGAAT +
Preference number: 2 (lower is better)
Translates to: GSPGGSRGGPRARGNPHLKDVLA*PPIRWN
Trigger: ATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT...GAGATGAGGGTTTCCACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564804.1
3UTR-3UTR CCA 90 bp GCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTGAGCGCCGGTGGCAGAAGCCTTTaGGAGGCCAGGAGACGGGCT +
Preference number: 2 (lower is better)
Translates to: AKHSLQTKQSGCQSALSAGGRSL*EARRRA
Trigger: AGCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACC...GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR-3UTR CCA 90 bp GGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTTGGCCCAGAGGCTaGAAGATGGTTTTGAACGCG +
Preference number: 2 (lower is better)
Translates to: GRSQGGHTWRTASRVVRGSWPRG*KMVLNA
Trigger: CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACT...TCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GAGAGGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: ERASRAGCQPKSFRKQGWGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...CCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GAGAGGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 2 (lower is better)
Translates to: ERASRAGCQPKSFRKQGWRLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...CCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp ACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGCAGCAGCCCCAGCATaGTGTCTAGGCTGCCCTTGC +
Preference number: 2 (lower is better)
Translates to: TRGAQRAASCVEVVLAQRAAAPA*CLGCPC
Trigger: GCAAGGGCAGCCTAGACACCATGCTGGGGCTGCTGC...CCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp CTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTCAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: LGASECPRRSPSCVGWAGQRPLA*VGTPRR
Trigger: CCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTG...ACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp ACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGAGCCACAGAGGCCTTTaGCCTGGGTGGGAACACCCC +
Preference number: 2 (lower is better)
Translates to: TRGAQRAASCVEVVLAQRSHRGL*PGWEHP
Trigger: GGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCT...CCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp CGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 2 (lower is better)
Translates to: RHAAAGHREATRGAQRAALCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...CGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GGGCTTGCCGGCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAACCATCTTGTGTCGGATaGGCTGGTTGCAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: GLAGALLEGPLGERAQAEPSCVG*AGCRSH
Trigger: GTGGCTTCTGCAACCAGCCCATCCGACACAAGATGG...TTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTACGGCCCTCGCGCTCGTaGAAACCCTCATCTCCGAAG +
Preference number: 2 (lower is better)
Translates to: GEPSGLSAEELQEAGLAVRPSRS*KPSSPK
Trigger: CTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCG...TACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CAA 90 bp TGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATaGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGGGA +
Preference number: 2 (lower is better)
Translates to: CREQGRPGLASDSLE*QGPSPSKGAPSRVG
Trigger: TCCCACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCACAAGGCCTCGGGGTCTaGAGGACCCGGCTTTTCCGG +
Preference number: 2 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPQGLGV*RTRLFR
Trigger: CCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTG...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp GTCCGGGTGCCAGAGCGCGCTGAGCGCCGAGATGTAGTTATCCAGGATGGGGCCCACCGGTGGCTGAGTTaGCCCAGAGGCTGGAAGATG +
Preference number: 2 (lower is better)
Translates to: VRVPERAERRDVVIQDGAHRWLS*PRGWKM
Trigger: CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTG...GGCCCCATCCTGGATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GGGCGAACAGCTGCAGGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTTTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 2 (lower is better)
Translates to: GRTAAGSPGGSRGGPRARLCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...ACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCCTGCAGCTGTTCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR TCA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCATGGGGCCTCCCGCTCTaGGAGCAAGGCCTCGGGGTC +
Preference number: 2 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSWGLPL*EQGLGV
Trigger: GACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCA...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR TCA 90 bp CCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCGCTGGAAGATGGTTTTaGACGCGGAAGTCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: PGRWNSLRKRSARGARRGAGRWF*TRKSES
Trigger: ACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGC...GCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR TCA 90 bp GCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGAAAGGGCTCCCCGCAACTaGCGCAGCAGAAATGCTCTG +
Preference number: 2 (lower is better)
Translates to: ALLEGPLGERAQAEGACERAPRN*RSRNAL
Trigger: CAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCT...TTCACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp GTAGCACTCGGGGCAGAAGGGGGCTCCATCCTTCTCGAAGAAGCTGCTGCCTCCTGTCTAGGCTGCCCTTaGCAGTCGGCTCTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: VALGAEGGSILLEEAAASCLGCP*QSALVG
Trigger: CCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACA...GGAGGCAGCAGCTTCTTCGAGAAGGATGGAGCCCCCTTCTGCCCCGAGTGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCAGCAATAGGTTTATTGCCAGTCGGCTCTGGTaGGGATGGGGAGCCCTCATT +
Preference number: 2 (lower is better)
Translates to: GVPGAAQSRHHLPSNRFIASRLW*GWGALI
Trigger: AATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGC...AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGAAGAGCCGCGTCGTGCGTaGAAGTGGTTCTCGCACAAC +
Preference number: 2 (lower is better)
Translates to: ALLEGPLGERAQAEGACEEPRRA*KWFSHN
Trigger: GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTC...TTCACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTAGGGCTAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGA +
Preference number: 2 (lower is better)
Translates to: AERAVSRRASGSRAGSRAKVHVK*SGWKRR
Trigger: TCGCCGCTTCCACCCGGACCACTTCACATGCACCTT...AGCCCTACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CAA 90 bp ACCACTTGCCCAGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGC +
Preference number: 2 (lower is better)
Translates to: TTCPAIGLLQEPQRP*AWVGTPRRLRSDCS
Trigger: GCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR TCA 90 bp CAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACACGGCGGAAGTCAGAGAGTaGGGCCATCAGTCTATCCAG +
Preference number: 2 (lower is better)
Translates to: QKVHVKWSGWKRRPRADTAEVRE*GHQSIQ
Trigger: CTGGATAGACTGATGGCCTCACTCTCTGACTTCCGC...CGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR-3UTR TCA 90 bp CCGGCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGCTGGAAGATGGTTTTaGACGCGGAAGTCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: PARSWKDPLVSGRRQKVHAGRWF*TRKSES
Trigger: ACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGC...ATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp GGGCGCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTGAGGACTGGTCCTCCTTCTaGTCTCCTGAAGCCACCTTG +
Preference number: 2 (lower is better)
Translates to: GREAFPADETVRVPERAEDWSSF*SPEATL
Trigger: CAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTC...CTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR-3UTR GCA 90 bp CGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAACCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: RSWKPSSPKGSPQLTQQKPSRRS*CLPGRW
Trigger: CCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGG...TTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCT +
Preference number: 2 (lower is better)
Translates to: LQWVGPPALRARPRGLEDVQSTL*ACGFRS
Trigger: AGACCTAAACCCACACGCCCACAAAGTGGATTGCAC...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAAGGGTGGGAATAGAGTaGAGGCCCGCACGGGAGTTC +
Preference number: 2 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPRVGIE*RPAREF
Trigger: GAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGGGAGCAAGGACGTCCTaGCCTGGCCTCCGATTCGCT +
Preference number: 2 (lower is better)
Translates to: APSRVGIEWRPAREFLSVGARTS*PGLRFA
Trigger: AGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC...CACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp TGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATGGTGGGCTGGAAGGGAGGCTaGGTCTTTTCTTATCTTCAG +
Preference number: 2 (lower is better)
Translates to: WVGTPRRLRSDCSSPSMVGWKGG*VFSYLQ
Trigger: CTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAGCC...CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR-3UTR CCA 90 bp GTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTTGCAGGCCAGGAGACGGGCTaGAAGGGAGGCTGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: VPVSAQGGHHLVSDGLVAGQETG*KGGWVF
Trigger: AAAGACCCAGCCTCCCTTCCAGCCCGTCTCCTGGCC...TGCAACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR-3UTR CCA 90 bp CTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: LGASECPRRSPSCVGWAGGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...ACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR TCA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGTGGGGCCTCCCGCTCTaGGAGCAAGGCCTCGGGGTC +
Preference number: 2 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLWGLPL*EQGLGV
Trigger: GACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCA...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR TCA 90 bp TTGCCCAGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGCTCACCACCGGTGGCTaGGTTGGCCCAGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: LPSNRFIAGATEAFGLGGLTTGG*VGPEAG
Trigger: TCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAG...CCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGGCTGGCAGTAGGGCTTaGCGGCGCGCTCCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGAGSRA*RRAPGR
Trigger: CCTTCCAGGAGCGCGCCGGCAAGCCCTACTGCCAGC...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564804.1
3UTR-3UTR CCA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCACAAGGCCTCGGGGTCTaGAGGACCCGGCTTTTCCGG +
Preference number: 2 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSQGLGV*RTRLFR
Trigger: CCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTG...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACAAGGCCTCGGGGTCTaGAGGACCCGGCTTTTCCGG +
Preference number: 2 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPQGLGV*RTRLFR
Trigger: CCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTG...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp GCAGCAGAAATGCTCTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGGGCCAGGAGACGGGCTaGAAGGGAGGCTGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: AAEMLWVPVSAQGGHHLVGQETG*KGGWVF
Trigger: AAAGACCCAGCCTCCCTTCCAGCCCGTCTCCTGGCC...CACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR-3UTR CCA 90 bp AGTAGCACTCGGGGCAGAAGGGGGCTCCATCCTTCTCGAAGAAGCTGCTGCCTCGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: SSTRGRRGLHPSRRSCCLGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...GAGGCAGCAGCTTCTTCGAGAAGGATGGAGCCCCCTTCTGCCCCGAGTGCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp AGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGGCCAGTCGGCTCTGGTaGGGATGGGGAGCCCTCATT +
Preference number: 2 (lower is better)
Translates to: SGGPHGSSCLCAIHFVGVASRLW*GWGALI
Trigger: AATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGC...CACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564804.1
3UTR-3UTR CCA 90 bp GGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTTTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 2 (lower is better)
Translates to: GRAERAVSRRASGSRAGSLCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...ACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CAA 90 bp CGGTCACCATCTTGTGTCGGATGGGCTGGTTGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGTAGCACTCGGGGCAGAAGGGGGCTC +
Preference number: 2 (lower is better)
Translates to: RSPSCVGWAGCRSHI*ARSAQSSTRGRRGL
Trigger: GAGCCCCCTTCTGCCCCGAGTGCTACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCAACCAGCCCATCCGACACAAGATGGTGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp AGAAGCCACATCTTGGCGAGAAGCGCTCAAAGTAGCACTCGGGGCAGAAGGGGGGCATGGTGTCTAGGCTaGCCTTGCCAGTCGGCTCTG +
Preference number: 2 (lower is better)
Translates to: RSHILARSAQSSTRGRRGAWCLG*PCQSAL
Trigger: CAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGC...CCCCCTTCTGCCCCGAGTGCTACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp GCGGCCCTCGCGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACAGAGCCGTCACCACTTaGCCAGCAATAGGTTTATTG +
Preference number: 2 (lower is better)
Translates to: AALALVETLISEGLPATDRAVTT*PAIGLL
Trigger: CAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCT...GTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR GCA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGCCGATTCGCTGGAATTaGAAGGACCCTCCCCCAGTA +
Preference number: 2 (lower is better)
Translates to: APSRVGIEWRPAREFLSVPIRWN*KDPPPV
Trigger: TACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG...CACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR GCA 90 bp GTCCGGGTGCCAGAGCGCGCTGAGCGCCGAGATGTAGTTATCCAGGATGGGGCCAGAGCCGTCACCACTTaGCCAGCAATAGGTTTATTG +
Preference number: 2 (lower is better)
Translates to: VRVPERAERRDVVIQDGARAVTT*PAIGLL
Trigger: CAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCT...GGCCCCATCCTGGATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CCA 90 bp GAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGCAGAAGCCACATCTTaGCGAGAAGCGCTCAAAGTA +
Preference number: 2 (lower is better)
Translates to: EGPLGERAQAEGACEVVRAEATS*REALKV
Trigger: TACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGC...CCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CAA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTaGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTG +
Preference number: 2 (lower is better)
Translates to: APSRVGIEWRPAREF*SVCNPLCGRVGLGL
Trigger: CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCT +
Preference number: 2 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPVQSTL*ACGFRS
Trigger: AGACCTAAACCCACACGCCCACAAAGTGGATTGCAC...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp GGTGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCT +
Preference number: 2 (lower is better)
Translates to: GAGSKDVLAWPPIRWNCKVQSTL*ACGFRS
Trigger: AGACCTAAACCCACACGCCCACAAAGTGGATTGCAC...CTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp CCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCTGGCCTCCGATTCGCTaGAATTGCAAGGACCCTCCC +
Preference number: 2 (lower is better)
Translates to: PLCGRVGLGLAGPFLNLTWPPIR*NCKDPP
Trigger: GGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCA...GGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CAA 90 bp AGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTT +
Preference number: 2 (lower is better)
Translates to: RVEARTGVLVCVQST*WACGFRSGWAVSEL
Trigger: AAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR GCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGGAGTTCTTGTCTGTGTaGAATCCACTTTGTGGGCGT +
Preference number: 2 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGEFLSV*NPLCGR
Trigger: ACGCCCACAAAGTGGATTGCACACAGACAAGAACTC...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp AGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGGGGTTTAGGTCTGGCTaGGCCGTTTCTGAACTTGAC +
Preference number: 2 (lower is better)
Translates to: SGGPHGSSCLCAIHFVGVGFRSG*AVSELD
Trigger: GTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCC...CACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGTGGCCTCCGATTCGCTaGAATTGCAAGGACCCTCCC +
Preference number: 2 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGWPPIR*NCKDPP
Trigger: GGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCA...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp AGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCT +
Preference number: 2 (lower is better)
Translates to: SGGPHGSSCLCAIHFVGVVQSTL*ACGFRS
Trigger: AGACCTAAACCCACACGCCCACAAAGTGGATTGCAC...CACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCAAGTTGGCCCAGAGGCTaGAAGATGGTTTTGAACGCG +
Preference number: 2 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPSWPRG*KMVLNA
Trigger: CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACT...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564804.1
3UTR-3UTR GCA 90 bp GGGAGGCTGGGTCTTTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCTCCTGAAGACTGGTCCTCCTTCTaGTCTCCTGAAGCCACCTTG +
Preference number: 2 (lower is better)
Translates to: GRLGLFLSSDWSSFCSPEDWSSF*SPEATL
Trigger: CAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTC...TTCAGGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR-3UTR CAA 90 bp CGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGAGGTGGCAGAAGCCTTaGGGAGGCCAGGAGACGGGC +
Preference number: 3 (lower is better)
Translates to: RHAAAGHREATRGAQRAARWQKP*GGQETG
Trigger: GCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACCT...CGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR GCA 72 bp CCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTaGTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACC +
Preference number: 3 (lower is better)
Translates to: PPRAVEQPPQTK*SGCQARPRAVT
Trigger: GGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 72 bp GGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTaGAAGCGGCGACCCAGGGCCGACACGCAGCGGCCG +
Preference number: 3 (lower is better)
Translates to: GRRQKVHVKWSG*KRRPRADTQRP
Trigger: CGGCCGCTGCGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 72 bp AGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTaGGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTC +
Preference number: 3 (lower is better)
Translates to: REATRGAQRAAS*VEVVLAQRAAL
Trigger: GAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 72 bp AGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTaGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTGC +
Preference number: 3 (lower is better)
Translates to: RPHVAHSEPRRA*KWFSHNGRPSC
Trigger: GCACGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATAGGTGGCAGAAGCCTTaGGGAGGCCAGGAGACGGGC +
Preference number: 3 (lower is better)
Translates to: GLGGNTPAAEVGLQQPQHRWQKP*GGQETG
Trigger: GCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACCT...ATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR GCA 72 bp GCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTaGAGCAGCCCCAGCATGGTGTCTAGGCTGCCCTTG +
Preference number: 3 (lower is better)
Translates to: AWVGTPRRLRSD*SSPSMVSRLPL
Trigger: CAAGGGCAGCCTAGACACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 72 bp GCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCA +
Preference number: 3 (lower is better)
Translates to: AVEQPPQTKCSG*QARPRAVTTCP
Trigger: TGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATGATGGGGAGCCCTCATTaGTGGAGCTCACCACCGGTG +
Preference number: 3 (lower is better)
Translates to: AWVGTPRRLRSDCSSPSMMGSPH*WSSPPV
Trigger: CACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCAT...CATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCC +
Preference number: 3 (lower is better)
Translates to: ARSWKDPLVSGRRQKVHVEPQRP*AWVGTP
Trigger: GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTC...CACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTAGGGCTTCCTGGAAGGACCCCTaGGTGAGCGGGCGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: AERAVSRRASGSRAGSRASWKDP*VSGRRQ
Trigger: CTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGA...AGCCCTACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 72 bp TTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGACCCAGGGCCGACACG +
Preference number: 3 (lower is better)
Translates to: LVSGRRQKVHVK*SGWKRRPRADT
Trigger: CGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCTCACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp CGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGGGCTGGAAGATGGTTTaGAACGCGGAAGTCAGAGAG +
Preference number: 3 (lower is better)
Translates to: RHAAAGHREATRGAQRAAGWKMV*NAEVRE
Trigger: CTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCC...CGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp ACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGTGTCTAGGCTGCCCTaGCCAGTCGGCTCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: TRGAQRAASCVEVVLAQRVSRLP*PVGSGG
Trigger: CCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACAC...CCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTATGGGGAGCCCTCATTaGTGGAGCTCACCACCGGTG +
Preference number: 3 (lower is better)
Translates to: GRAERAVSRRASGSRAGSMGSPH*WSSPPV
Trigger: CACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCAT...ACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GGCCGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCCAGAGCCGTCACCACTaGCCCAGCAATAGGTTTATT +
Preference number: 3 (lower is better)
Translates to: GRHAAAGHREATRGAQRAQSRHH*PSNRFI
Trigger: AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTG...GGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 72 bp CGGGGCAGAAGGGGGCTCCATCCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGGAACAGCCTCCGCAAA +
Preference number: 3 (lower is better)
Translates to: RGRRGLHPSRRS*CLPGRWNSLRK
Trigger: TTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGGATGGAGCCCCCTTCTGCCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 72 bp GCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTaGTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAG +
Preference number: 3 (lower is better)
Translates to: AWKWFSHNGRPS*SKKLPPEKGAK
Trigger: CTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCACGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 72 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTaGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTC +
Preference number: 3 (lower is better)
Translates to: GSKDVLAWPPIR*NCKDPPPVRGL
Trigger: GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR TCA 72 bp CCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTATCCAGGATGGGGCCCT +
Preference number: 3 (lower is better)
Translates to: PCRRNSPGARAR*APRCSYPGWGP
Trigger: AGGGCCCCATCCTGGATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 72 bp GGCAGAAGGGGGCTCCATCCTTCTCGAAGAAGCTGCTaGCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGA +
Preference number: 3 (lower is better)
Translates to: GRRGLHPSRRSC*LPGRWNSLRKR
Trigger: TCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGGATGGAGCCCCCTTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGGCTGGAAGATGGTTTaGAACGCGGAAGTCAGAGAG +
Preference number: 3 (lower is better)
Translates to: AVEQPPQTKCSGCQARPRGWKMV*NAEVRE
Trigger: CTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCC...TCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACAAGGCGGTCACCATCTaGTGTCGGATGGGCTGGTTG +
Preference number: 3 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADKAVTI*CRMGWL
Trigger: CAACCAGCCCATCCGACACAAGATGGTGACCGCCTT...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGTCCGATTCGCTGGAATaGCAAGGACCCTCCCCCAGT +
Preference number: 3 (lower is better)
Translates to: EGPLGERAQAEGACEVVRSDSLE*QGPSPS
Trigger: ACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGA...CCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564804.1
3UTR-3UTR CAA 90 bp GAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAATGCTCTGGGTGTCTAGGCTGCCCTaGCCAGTCGGCTCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: ETLISEGLPATDAAEMLWVSRLP*PVGSGG
Trigger: CCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACAC...CCAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp CCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCAGAGCCGTCACCACTaGCCCAGCAATAGGTTTATT +
Preference number: 3 (lower is better)
Translates to: PPRAVEQPPQTKCSGCQAQSRHH*PSNRFI
Trigger: AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTG...CGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR GCA 72 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTaGAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAA +
Preference number: 3 (lower is better)
Translates to: KDVLAWPPIRWN*KDPPPVRGLPQ
Trigger: TTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CCA 72 bp AACAGTGAGGGTGCAGGGAGCAAGGACGTCCTGGCCTaGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCC +
Preference number: 3 (lower is better)
Translates to: NSEGAGSKDVLA*PPIRWNCKDPP
Trigger: GGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACCCTCACTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
3UTR CCA 72 bp ATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGC +
Preference number: 3 (lower is better)
Translates to: IGLLQEPQRPLA*VGTPRRLRSDC
Trigger: GCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACCCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADPAIGL*QEPQRP
Trigger: AGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 72 bp CACAGAACAGTGAGGGTGCAGGGAGCAAGGACGTCCTaGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACC +
Preference number: 3 (lower is better)
Translates to: HRTVRVQGARTS*PGLRFAGIART
Trigger: GGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACCCTCACTGTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
3UTR CCA 72 bp GAAGGGCTCCCCGCAACTGACGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTT +
Preference number: 3 (lower is better)
Translates to: EGLPATDAAEML*VPVSAQGGHHL
Trigger: AAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGCCCGCACGGGAGTTCTaGTCTGTGTGCAATCCACTT +
Preference number: 3 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGPAREF*SVCNPL
Trigger: AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGG...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR TCA 72 bp CCGCAACTGACGCAGCAGAAATGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACCATCTTGTGTCGGATG +
Preference number: 3 (lower is better)
Translates to: PQLTQQKCSGCQ*VPKAVTILCRM
Trigger: CATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGTTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGG +
Preference number: 3 (lower is better)
Translates to: RPGLASDSLELQGPSPSKCVQST*WACGFR
Trigger: CCTAAACCCACACGCCCACAAAGTGGATTGCACACA...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CAA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACGGCTGGAAGATGGTTTaGAACGCGGAAGTCAGAGAG +
Preference number: 3 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDGWKMV*NAEVRE
Trigger: CTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCC...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564804.1
3UTR-3UTR CAA 90 bp GCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCCATGGGGAGCCCTCATTaGTGGAGCTCACCACCGGTG +
Preference number: 3 (lower is better)
Translates to: AIGLLQEPQRPLAWVGTPMGSPH*WSSPPV
Trigger: CACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCAT...GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGG +
Preference number: 3 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVCVQST*WACGFR
Trigger: CCTAAACCCACACGCCCACAAAGTGGATTGCACACA...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CAA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGG +
Preference number: 3 (lower is better)
Translates to: APSRVGIEWRPAREFLSVCVQST*WACGFR
Trigger: CCTAAACCCACACGCCCACAAAGTGGATTGCACACA...CACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CCA 72 bp GCCCTCATTTGTGGAGCTCACCACCGGTGGCTGAGTTaGCCCAGAGGCTGGAAGATGGTTTTGAACGCGGAA +
Preference number: 3 (lower is better)
Translates to: ALICGAHHRWLS*PRGWKMVLNAE
Trigger: TTCCGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAGCTCCACAAATGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAATGCTCTGGCCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: ETLISEGLPATDAAEMLWPAIGL*QEPQRP
Trigger: AGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG...CCAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR-3UTR CAA 90 bp GAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAATGCTCTGGTGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: ETLISEGLPATDAAEMLWCRSHI*ARSAQS
Trigger: ACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCA...CCAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
3UTR CCA 72 bp CGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCT +
Preference number: 3 (lower is better)
Translates to: RTGVLVCVQSTL*ACGFRSGWAVS
Trigger: AGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR GCA 72 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTaGAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTG +
Preference number: 3 (lower is better)
Translates to: IEWRPAREFLSV*NPLCGRVGLGL
Trigger: CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR-3UTR CAA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGG +
Preference number: 3 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGCVQST*WACGFR
Trigger: CCTAAACCCACACGCCCACAAAGTGGATTGCACACA...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CCA 72 bp CTGGAAGGGAGGCTGGGTCTTTTCTTATCTTCAGACTaGTCCTCCTTCTGCTCTCCTGAAGCCACCTTGCTA +
Preference number: 3 (lower is better)
Translates to: LEGRLGLFLSSD*SSFCSPEATLL
Trigger: TAGCAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
3UTR TCA 72 bp TTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCTCCTaGAGCCACCTTGCTAGATGGGAACTGAGACATGAT +
Preference number: 3 (lower is better)
Translates to: FLIFRLVLLLLS*SHLARWELRHD
Trigger: ATCATGTCTCAGTTCCCATCTAGCAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR CCA 90 bp CGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGCAGGGAGGCCACACGTaGCGCACAGCGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: RHAAAGHREATRGAQRAAQGGHT*RTASRV
Trigger: GACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTG...CGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTGGGGCCTCCCGCTCTaGGAGCAAGGCCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: VGGASRSESKASGSGGPGWGLPL*EQGLGV
Trigger: GACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCA...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTGGGGCCTCCCGCTCTaGGAGCAAGGCCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPAWGLPL*EQGLGV
Trigger: GACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCA...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGCGAACAGCTGCAGGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTGGCTGGAAGAGGAGAATaGAGGGGCCGCCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GEQLQEVPAAVGAALALVAGRGE*RGRRGC
Trigger: GCAGCCCCGGCGGCCCCTCCATTCTCCTCTTCCAGC...CACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCCTGCAGCTGTTCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTCAGGGAGGCCACACGTaGCGCACAGCGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPAQGGHT*RTASRV
Trigger: GACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTG...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATGGTGCATCCAGGTCCTCCATaGCGGGGCGCGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: WVGTPRRLRSDCSSPSMVHPGPP*RGAGRW
Trigger: CCACCGGCCCGCGCCCCGCCATGGAGGACCTGGATG...CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563712.6
CDS-3UTR TCA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCCTCACCACCGGTGGCTaGGTTGGCCCAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VGGASRSESKASGSGGPGLTTGG*VGPEAG
Trigger: TCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAG...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCGCGGGGCGAACAGCTaGAGGAAGTCCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LQWVGPPALRARPRGLEDRGANS*RKSRRQ
Trigger: CTGCCGCCGGGACTTCCTGCAGCTGTTCGCCCCGCG...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGGGTGGCAGAAGCCTTTaGGAGGCCAGGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: RHAAAGHREATRGAQRAAGGRSL*EARRRA
Trigger: AGCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACC...CGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGTGAAGTGGTCCGGGTaGAAGCGGCGACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QWVGPPALRARPRGLEDPVKWSG*KRRPRA
Trigger: GGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCAC...CGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTCTCACCACCGGTGGCTaGGTTGGCCCAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPALTTGG*VGPEAG
Trigger: TCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAG...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGTGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: QWVGPPALRARPRGLEDPCSGCQ*VPKAVT
Trigger: GGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCA...CGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GTAGGGCTTGCCGGCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCATGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: VGLAGALLEGPLGERAQACSGCQ*VPKAVT
Trigger: GGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCA...TGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAAGCCCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp AGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTGCTCGATGGGGCCTCCCGCTCTaGGAGCAAGGCCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SRVVRGSGSRTTGGPRARWGLPL*EQGLGV
Trigger: GACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCA...TCGAGCACGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR GCA 90 bp CAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGCGGCTGAGGTCGGACTaGAGCAGCCCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: QWVGPPALRARPRGLEDPRLRSD*SSPSMV
Trigger: CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCG...CGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGCTTGCCGGCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAACGGCTGAGGTCGGACTaGAGCAGCCCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GLAGALLEGPLGERAQAERLRSD*SSPSMV
Trigger: CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCG...TTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCCCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VGGASRSESKASGSGGPGPSRRS*CLPGRW
Trigger: CCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGG...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGCTGGCAGTAGGGCTTaGCGGCGCGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLEAGSRA*RRAPGR
Trigger: CCTTCCAGGAGCGCGCCGGCAAGCCCTACTGCCAGC...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGCGAACAGCTGCAGGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTCGGGGCTGCAGGCTTTaGGGACCGAGGCTTGCATAC +
Preference number: 4 (lower is better)
Translates to: GRTAAGSPGGSRGGPRARRGCRL*GPRLAY
Trigger: GTATGCAAGCCTCGGTCCCCAAAGCCTGCAGCCCCG...ACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCCTGCAGCTGTTCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGGCCGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GPTRSGRSQGGHTWRTASRLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...GCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: GTASANEVLGVPGAAQSRQRPLA*VGTPRR
Trigger: CCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTG...ACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGTGAAGTGGTCCGGGTaGAAGCGGCGACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPPALRARPRGLEDPAFPVKWSG*KRRPRA
Trigger: GGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCAC...CGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTGCCGGCGCGCTCCTaGAAGGACCCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPALPARS*KDPLVS
Trigger: GCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAA...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCCAAGGCCTCGGGGTCTaGAGGACCCGGCTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: PVGGASRSESKASGSGGPQGLGV*RTRLFR
Trigger: CCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTG...GGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGCCCCAGCATGGTGTCTAGGCTGCCCTTGCCAGTCGGCTCTGGTGGGGATGGGTGTCCAGGTCCTCCATaGCGGGGCGCGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SPSMVSRLPLPVGSGGDGCPGPP*RGAGRW
Trigger: CCACCGGCCCGCGCCCCGCCATGGAGGACCTGGACA...CCCATCCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGCTGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567066.6
CDS-3UTR TCA 90 bp GCCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCCTCACCACCGGTGGCTaGGTTGGCCCAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ASQGGGTASANEVLGVPGLTTGG*VGPEAG
Trigger: TCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAG...GCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp GGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGGGCTCCCCGCAACTaGCGCAGCAGAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRSQGGHTWRTASRVVRGRAPRN*RSRNAL
Trigger: CAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCT...TCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp GGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAGGCAGAAGGTGCATGTaGAGTGGTCCGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GRSQGGHTWRTASRVVRGGRRCM*SGPGGS
Trigger: GCTTCCACCCGGACCACTTCACATGCACCTTCTGCC...TCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp GGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGCTGGAAGCCCGGCCGTaGCCATGTAAGGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GHREATRGAQRAASCVEVLEARP*PCKEAG
Trigger: CCCGGCTTCCTTACATGGTCACGGCCGGGCTTCCAG...CACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567066.6
CDS-3UTR GCA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTCTCGAAGAAGCTGCTaGCTCCCAGGGCGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: VGGASRSESKASGSGGPGSRRSC*LPGRWN
Trigger: GTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGA...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTCCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPAPSRRS*CLPGRW
Trigger: CCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGG...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATGCCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AWVGTPRRLRSDCSSPSMPSRRS*CLPGRW
Trigger: CCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGG...CATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACCGCGGGGCGAACAGCTaGAGGAAGTCCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADRGANS*RKSRRQ
Trigger: CTGCCGCCGGGACTTCCTGCAGCTGTTCGCCCCGCG...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCCGTGCTCGAAAAAGCTaGCTCCCGAGAAGGGCGCGA +
Preference number: 4 (lower is better)
Translates to: VGGASRSESKASGSGGPGRARKS*LPRRAR
Trigger: TCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCACG...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCAACGGGCGGCCCTCGTaGTCGAAAAAGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PVGGASRSESKASGSGGPNGRPS*SKKLPP
Trigger: GGGAGGCAGCTTTTTCGAGCACGAGGGCCGCCCGTT...GGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGCCGCAGGGCGCTCTTTaGGAGCCCCTGACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLEPQGAL*EPLTLA
Trigger: TGCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGG...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCCCGCAGGGCGCTCTTTaGGAGCCCCTGACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ANEVLGVPGAAQSRHHLPPQGAL*EPLTLA
Trigger: TGCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGG...GGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000564804.1
CDS-3UTR CCA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCCCCAGACCCTGTCTGTaGCTGGTGGCCATAGGATGG +
Preference number: 4 (lower is better)
Translates to: VGGASRSESKASGSGGPGPRPCL*LVAIGW
Trigger: CCATCCTATGGCCACCAGCCACAGACAGGGTCTGGG...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGGCCAGGAGACGGGCTaGAAGGGAGGCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QWVGPPALRARPRGLEDPGQETG*KGGWVF
Trigger: AAAGACCCAGCCTCCCTTCCAGCCCGTCTCCTGGCC...CGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR CCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTGGTGGCAGAAGCCTTTaGGAGGCCAGGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPAGGRSL*EARRRA
Trigger: AGCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACC...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATGGTGTCCTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGNTPAAEVGLQQPQHGVLASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...GACACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCCTTTGGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCGCAGCAGCCCCAGCATaGTGTCTAGGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: AFGLGGNTPAAEVGLQQPAAAPA*CLGCPC
Trigger: GCAAGGGCAGCCTAGACACCATGCTGGGGCTGCTGC...GGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGACAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PPALRARPRGLEDPAFPGQRPLA*VGTPRR
Trigger: CCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTG...TCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTGCCTCCCAGGGCGGTaGAACAGCCTCCGCAAACGA +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPACLPGR*NSLRKR
Trigger: TCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCA...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCCTTTGGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCGGCCCTCGCGCTCGTaGAAACCCTCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: AFGLGGNTPAAEVGLQQPRPSRS*KPSSPK
Trigger: CTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCG...GGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GTAGGGCTTGCCGGCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCACGGCCCTCGCGCTCGTaGAAACCCTCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: VGLAGALLEGPLGERAQARPSRS*KPSSPK
Trigger: CTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCG...TGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAAGCCCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp TCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTGTGAAGTGGTCCGGGTaGAAGCGGCGACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SQGGHTWRTASRVVRGSGVKWSG*KRRPRA
Trigger: GGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCAC...ACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGTTGCCGGCGCGCTCCTaGAAGGACCCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GPPALRARPRGLEDPAFPLPARS*KDPLVS
Trigger: GCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAA...CGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGAGCAAGGACGTCCTaGCCTGGCCTCCGATTCGCT +
Preference number: 4 (lower is better)
Translates to: PVGGASRSESKASGSGGPGARTS*PGLRFA
Trigger: AGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC...GGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GGCCGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGGAAGTCAGAGAGTaGGGCCATCAGTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: GRHAAAGHREATRGAQRAAEVRE*GHQSIQ
Trigger: CTGGATAGACTGATGGCCTCACTCTCTGACTTCCGC...GGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp CCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGACTCACCACCGGTGGCTaGGTTGGCCCAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PPALRARPRGLEDPAFPGLTTGG*VGPEAG
Trigger: TCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAG...TCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: QWVGPPALRARPRGLEDPGARAR*APRCSY
Trigger: ATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACC...CGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CCAGCATGGTGTCTAGGCTGCCCTTGCCAGTCGGCTCTGGTGGGGATGGGGAGCCCTCCGCAAACGAAGTaGTCGGGGTGCCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PAWCLGCPCQSALVGMGSPPQTK*SGCQAR
Trigger: CCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGG...GCTCCCCATCCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATGGTGTCCCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GGNTPAAEVGLQQPQHGVPSRRS*CLPGRW
Trigger: CCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGG...GACACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGAACGCGGGGCGAACAGCTaGAGGAAGTCCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLEGPLGERAQAEGACERGANS*RKSRRQ
Trigger: CTGCCGCCGGGACTTCCTGCAGCTGTTCGCCCCGCG...TTCACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GTAGGGCTTGCCGGCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCACGTGCTCGAAAAAGCTaGCTCCCGAGAAGGGCGCGA +
Preference number: 4 (lower is better)
Translates to: VGLAGALLEGPLGERAQARARKS*LPRRAR
Trigger: TCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCACG...TGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAAGCCCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp TGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATGGTGAACGGGCGGCCCTCGTaGTCGAAAAAGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: WVGTPRRLRSDCSSPSMVNGRPS*SKKLPP
Trigger: GGGAGGCAGCTTTTTCGAGCACGAGGGCCGCCCGTT...CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp AGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTGGAAACCCTCATCTCCGAAACGGGCGGCCCTCGTaGTCGAAAAAGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SPGGSRGGPRARGNPHLRNGRPS*SKKLPP
Trigger: GGGAGGCAGCTTTTTCGAGCACGAGGGCCGCCCGTT...TCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGACAGCGAGCCGCGTCGTaGGTGGAAGTGGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: AVEQPPQTKCSGCQARPRQRAAS*VEVVLA
Trigger: TGCGAGAACCACTTCCACGCACGACGCGGCTCGCTG...TCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGCAGCGAGCCGCGTCGTaGGTGGAAGTGGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLEQRAAS*VEVVLA
Trigger: TGCGAGAACCACTTCCACGCACGACGCGGCTCGCTG...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGACCGCAGGGCGCTCTTTaGGAGCCCCTGACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PPALRARPRGLEDPAFPGPQGAL*EPLTLA
Trigger: TGCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGG...TCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTACCGTGCTGTACAGGTaGTCCTTGTCCCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPATVLYR*SLSPEA
Trigger: AGCCTCGGGGGACAAGGACCACCTGTACAGCACGGT...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGACCGTGCTGTACAGGTaGTCCTTGTCCCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: QWVGPPALRARPRGLEDPTVLYR*SLSPEA
Trigger: AGCCTCGGGGGACAAGGACCACCTGTACAGCACGGT...CGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACGCTGGAAGAGGAGAATaGAGGGGCCGCCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADAGRGE*RGRRGC
Trigger: GCAGCCCCGGCGGCCCCTCCATTCTCCTCTTCCAGC...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PVGGASRSESKASGSGGPGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...GGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTCGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPARLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGCCAGTCGGCTCTGGTaGGGATGGGGAGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLEASRLW*GWGALI
Trigger: AATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGC...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCCTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RRQKVHVKWSGWKRRPRALASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...GGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTACAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: GEPSGLSAEELQEAGLAVQRPLA*VGTPRR
Trigger: CCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTG...TACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTGCCTCCCAGGGCGGTaGAACAGCCTCCGCAAACGA +
Preference number: 4 (lower is better)
Translates to: HSEPRRAWKWFSHNGRPSCLPGR*NSLRKR
Trigger: TCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCA...CGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCGGCCCTCGCGCTCGTaGAAACCCTCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LQWVGPPALRARPRGLEDRPSRS*KPSSPK
Trigger: CTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCG...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCGGCCCTCGCGCTCGTaGAAACCCTCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: GTASANEVLGVPGAAQSRRPSRS*KPSSPK
Trigger: CTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCG...ACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGCGTCGTGCGTGGAAGTaGTTCTCGCACAACGGGCGG +
Preference number: 4 (lower is better)
Translates to: GHREATRGAQRAASCVEVRRAWK*FSHNGR
Trigger: CCGCCCGTTGTGCGAGAACCACTTCCACGCACGACG...CACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTAGTGAAGTGGTCCGGGTaGAAGCGGCGACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GEPSGLSAEELQEAGLAVVKWSG*KRRPRA
Trigger: GGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCAC...TACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTCAAGGCCTCGGGGTCTaGAGGACCCGGCTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: GRAERAVSRRASGSRAGSQGLGV*RTRLFR
Trigger: CCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTG...ACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR CCA 90 bp GCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGAGGGCGCGGAGCAAGGACGTCCTaGCCTGGCCTCCGATTCGCT +
Preference number: 4 (lower is better)
Translates to: ALRARPRGLEDPAFPGGRGARTS*PGLRFA
Trigger: AGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC...GCGCCCTCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: GPPALRARPRGLEDPAFPGARAR*APRCSY
Trigger: ATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACC...CGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGAGGGCGCGGCAGAAGGTGCATGTaGAGTGGTCCGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ALRARPRGLEDPAFPGGRGRRCM*SGPGGS
Trigger: GCTTCCACCCGGACCACTTCACATGCACCTTCTGCC...GCGCCCTCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACGGCAGAAGGTGCATGTaGAGTGGTCCGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQWVGPPALRARPRGLEDGRRCM*SGPGGS
Trigger: GCTTCCACCCGGACCACTTCACATGCACCTTCTGCC...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGCGAACAGCTGCAGGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTTTGGGGACCGAGGCTTaGATACCGTGCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: GRTAAGSPGGSRGGPRARLGTEA*IPCCTG
Trigger: ACCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAA...ACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCCTGCAGCTGTTCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp TTGCCGGCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGGCATGGTGTCTAGGCTaGCCTTGCCAGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LPARSWKDPLVSGRRQKVAWCLG*PCQSAL
Trigger: CAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGC...CACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCAGCAATAGGTTTATTACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GVPGAAQSRHHLPSNRFITKCSG*QARPRA
Trigger: GGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGT...AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GGTGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GAGSKDVLAWPPIRWNCKTKCSG*QARPRA
Trigger: GGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGT...CTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTCTCGAAGAAGCTGCTaGCTCCCAGGGCGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: HSEPRRAWKWFSHNGRPSSRRSC*LPGRWN
Trigger: GTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGA...CGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGACTGGGTGCCAGTGAGTaGCCAAGGCGGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: AVEQPPQTKCSGCQARPRLGASE*PRRSPS
Trigger: AGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG...TCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp CTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTCGCGGGGCGAACAGCTaGAGGAAGTCCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LGASECPRRSPSCVGWAGRGANS*RKSRRQ
Trigger: CTGCCGCCGGGACTTCCTGCAGCTGTTCGCCCCGCG...ACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCGCTGGCAGTAGGGCTTaGCGGCGCGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AWPPIRWNCKDPPPVRGLAGSRA*RRAPGR
Trigger: CCTTCCAGGAGCGCGCCGGCAAGCCCTACTGCCAGC...GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGCCCAGACCCTGTCTGTaGCTGGTGGCCATAGGATGG +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLEPRPCL*LVAIGW
Trigger: CCATCCTATGGCCACCAGCCACAGACAGGGTCTGGG...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGACGGGGCTGCAGGCTTTaGGGACCGAGGCTTGCATAC +
Preference number: 4 (lower is better)
Translates to: PPALRARPRGLEDPAFPGRGCRL*GPRLAY
Trigger: GTATGCAAGCCTCGGTCCCCAAAGCCTGCAGCCCCG...TCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCGCTGGAAGAGGAGAATaGAGGGGCCGCCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LASDSLELQGPSPSKGAPAGRGE*RGRRGC
Trigger: GCAGCCCCGGCGGCCCCTCCATTCTCCTCTTCCAGC...GGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTGGAAACCCTCATCTCGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GSPGGSRGGPRARGNPHLGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...GAGATGAGGGTTTCCACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GAGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCGCCAGTCGGCTCTGGTaGGGATGGGGAGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: ERAQAEGACEVVRVEAATASRLW*GWGALI
Trigger: AATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGC...GGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GAGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCGCAGCAGCCCCAGCATaGTGTCTAGGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: ERAQAEGACEVVRVEAATAAAPA*CLGCPC
Trigger: GCAAGGGCAGCCTAGACACCATGCTGGGGCTGCTGC...GGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACTGTAGTTATCCAGGATaGGGCCCTGGCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LQWVGPPALRARPRGLEDCSYPG*GPGSPG
Trigger: GCCAGGGCTGCCAGGGCCCCATCCTGGATAACTACA...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGTGTAGTTATCCAGGATaGGGCCCTGGCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLECSYPG*GPGSPG
Trigger: GCCAGGGCTGCCAGGGCCCCATCCTGGATAACTACA...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGAGCCGCGTCGTGCGTaGAAGTGGTTCTCGCACAAC +
Preference number: 4 (lower is better)
Translates to: ASQGGGTASANEVLGVPGEPRRA*KWFSHN
Trigger: GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTC...GCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCACAGGGAGGCCACACGTaGCGCACAGCGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPQGGHT*RTASRV
Trigger: GACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTG...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGGTGAAGTGGTCCGGGTaGAAGCGGCGACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQVKWSG*KRRPRA
Trigger: GGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCAC...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCAGCATGGTGTCTAGGCTGCCCTTGCCAGTCGGCTCTGGTGGGGATGGGGAGCTTGCCGGCGCGCTCCTaGAAGGACCCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PAWCLGCPCQSALVGMGSLPARS*KDPLVS
Trigger: GCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAA...GCTCCCCATCCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATTGGCCTCCGATTCGCTaGAATTGCAAGGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: GLGGNTPAAEVGLQQPQHWPPIR*NCKDPP
Trigger: GGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCA...ATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR CCA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCAGAGCAGGGCATGCTTaGAGCCAAGCACAAACCCAG +
Preference number: 4 (lower is better)
Translates to: VGGASRSESKASGSGGPGRAGHA*SQAQTQ
Trigger: CTGGGTTTGTGCTTGGCTCCAAGCATGCCCTGCTCT...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394858.6
CDS-3UTR TCA 90 bp CCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGAAGGGCTCCCCGCAACTaGCGCAGCAGAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPALRARPRGLEDPAFPGRAPRN*RSRNAL
Trigger: CAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCT...TCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GCGGCCCTCGCGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: AALALVETLISEGLPATDGARAR*APRCSY
Trigger: ATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACC...GTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp CCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCAAGTGCACAGAACAGTaGGGGTGCAGGGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: PVGGASRSESKASGSGGPKCTEQ*GCREQG
Trigger: TCCTTGCTCCCTGCACCCTCACTGTTCTGTGCACTT...GGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR GCA 90 bp ACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGTGTCTAGGCTGCCCTTaGCAGTCGGCTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TRGAQRAASCVEVVLAQRCLGCP*QSALVG
Trigger: CCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACA...CCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGGCATGGTGTCTAGGCTaGCCTTGCCAGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ARSWKDPLVSGRRQKVHVAWCLG*PCQSAL
Trigger: CAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGC...CACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GGTGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGCCTCCGCAAACGAAGTaGTCGGGGTGCCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GAGSKDVLAWPPIRWNCKPPQTK*SGCQAR
Trigger: CCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGG...CTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGGCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTCCTCCGCAAACGAAGTaGTCGGGGTGCCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GAPSRVGIEWRPAREFLSPPQTK*SGCQAR
Trigger: CCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGG...AGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp AGAGGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCTCTCGAAGAAGCTGCTaGCTCCCAGGGCGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: RGRAERAVSRRASGSRAGSRRSC*LPGRWN
Trigger: GTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGA...GCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp AGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCCTGGGTGCCAGTGAGTaGCCAAGGCGGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: SGRRQKVHVKWSGWKRRPLGASE*PRRSPS
Trigger: AGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG...GGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACCAGCGAGCCGCGTCGTaGGTGGAAGTGGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADQRAAS*VEVVLA
Trigger: TGCGAGAACCACTTCCACGCACGACGCGGCTCGCTG...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACGCTGGCAGTAGGGCTTaGCGGCGCGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDAGSRA*RRAPGR
Trigger: CCTTCCAGGAGCGCGCCGGCAAGCCCTACTGCCAGC...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTACCGTGCTGTACAGGTaGTCCTTGTCCCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GRAERAVSRRASGSRAGSTVLYR*SLSPEA
Trigger: AGCCTCGGGGGACAAGGACCACCTGTACAGCACGGT...ACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATTACCCAAGACACCGCTaGAAGAGGAGAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GLGGNTPAAEVGLQQPQHYPRHR*KRRMEG
Trigger: CCCCTCCATTCTCCTCTTCCAGCGGTGTCTTGGGTA...ATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCAGTTGGCCCAGAGGCTaGAAGATGGTTTTGAACGCG +
Preference number: 4 (lower is better)
Translates to: VGGASRSESKASGSGGPGSWPRG*KMVLNA
Trigger: CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACT...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGACACCGGTGGCTGAGTTaGCCCAGAGGCTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PPALRARPRGLEDPAFPGHRWLS*PRGWKM
Trigger: CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTG...TCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTGAGCGCCGCAGCAGCCCCAGCATaGTGTCTAGGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: AKHSLQTKQSGCQSALSAAAAPA*CLGCPC
Trigger: GCAAGGGCAGCCTAGACACCATGCTGGGGCTGCTGC...GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp AGCCCCAGCATGGTGTCTAGGCTGCCCTTGCCAGTCGGCTCTGGTGGGGATGGGAGCCACAGAGGCCTTTaGCCTGGGTGGGAACACCCC +
Preference number: 4 (lower is better)
Translates to: SPSMVSRLPLPVGSGGDGSHRGL*PGWEHP
Trigger: GGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCT...CCCATCCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGCTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp ACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGTGCCTCCCAGGGCGGTaGAACAGCCTCCGCAAACGA +
Preference number: 4 (lower is better)
Translates to: TRGAQRAASCVEVVLAQRCLPGR*NSLRKR
Trigger: TCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCA...CCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACCGTCGTGCGTGGAAGTaGTTCTCGCACAACGGGCGG +
Preference number: 4 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADRRAWK*FSHNGR
Trigger: CCGCCCGTTGTGCGAGAACCACTTCCACGCACGACG...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACCGTCGTGCGTGGAAGTaGTTCTCGCACAACGGGCGG +
Preference number: 4 (lower is better)
Translates to: PHVAHSEPRRAWKWFSHNRRAWK*FSHNGR
Trigger: CCGCCCGTTGTGCGAGAACCACTTCCACGCACGACG...GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCTCACCACCGGTGGCTGAGTTGGCCCAGAGGCTGGAAGATGGTTTTGAACGCGCAGGGAGGCCACACGTaGCGCACAGCGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: AHHRWLSWPRGWKMVLNAQGGHT*RTASRV
Trigger: GACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTG...CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: GPPALRARPRGLEDPAFPKVHVK*SGWKRR
Trigger: TCGCCGCTTCCACCCGGACCACTTCACATGCACCTT...CGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGAGGGCGCAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: ALRARPRGLEDPAFPGGRKVHVK*SGWKRR
Trigger: TCGCCGCTTCCACCCGGACCACTTCACATGCACCTT...GCGCCCTCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGAAGGACGTCCTGGCCTaGCCTCCGATTCGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLEKDVLA*PPIRWN
Trigger: ATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGCGGAAGTCAGAGAGTaGGGCCATCAGTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: RSQGGHTWRTASRVVRGSAEVRE*GHQSIQ
Trigger: CTGGATAGACTGATGGCCTCACTCTCTGACTTCCGC...ACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGCTCACCACCGGTGGCTaGGTTGGCCCAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKLTTGG*VGPEAG
Trigger: TCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAG...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGTGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKCSGCQ*VPKAVT
Trigger: GGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCA...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACAGGGCTCCCCGCAACTaGCGCAGCAGAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADRAPRN*RSRNAL
Trigger: CAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCT...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp CAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACACGGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: QKVHVKWSGWKRRPRADTGARAR*APRCSY
Trigger: ATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACC...CGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp CCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGCAGAAGGTGCATGTaGAGTGGTCCGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PHVAHSEPRRAWKWFSHNGRRCM*SGPGGS
Trigger: GCTTCCACCCGGACCACTTCACATGCACCTTCTGCC...GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACTGGTCCTCCTTCTaGTCTCCTGAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLEDWSSF*SPEATL
Trigger: CAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTC...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGACTGGTCCTCCTTCTaGTCTCCTGAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: GPPALRARPRGLEDPAFPDWSSF*SPEATL
Trigger: CAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTC...CGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGGCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTCGGCTGAGGTCGGACTaGAGCAGCCCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GAPSRVGIEWRPAREFLSRLRSD*SSPSMV
Trigger: CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCG...AGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCACGGCTGAGGTCGGACTaGAGCAGCCCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPRLRSD*SSPSMV
Trigger: CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCG...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVTKCSG*QARPRA
Trigger: GGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGT...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp AGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SGGPHGSSCLCAIHFVGVTKCSG*QARPRA
Trigger: GGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGT...CACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACCTGGGTGCCAGTGAGTaGCCAAGGCGGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: PHVAHSEPRRAWKWFSHNLGASE*PRRSPS
Trigger: AGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG...GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCAGCAATAGGTTTATTACGAAACAGTCCGGGTaGCAGAGCGCGCTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GVPGAAQSRHHLPSNRFITKQSG*QSALSA
Trigger: GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGT...AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACACGAAACAGTCCGGGTaGCAGAGCGCGCTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDTKQSG*QSALSA
Trigger: GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGT...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACCCCAGACCCTGTCTGTaGCTGGTGGCCATAGGATGG +
Preference number: 4 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADPRPCL*LVAIGW
Trigger: CCATCCTATGGCCACCAGCCACAGACAGGGTCTGGG...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000564804.1
CDS-3UTR CCA 90 bp GCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCGGGGCTGCAGGCTTTaGGGACCGAGGCTTGCATAC +
Preference number: 4 (lower is better)
Translates to: AWPPIRWNCKDPPPVRGLRGCRL*GPRLAY
Trigger: GTATGCAAGCCTCGGTCCCCAAAGCCTGCAGCCCCG...GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTACCCAAGACACCGCTaGAAGAGGAGAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HSEPRRAWKWFSHNGRPSYPRHR*KRRMEG
Trigger: CCCCTCCATTCTCCTCTTCCAGCGGTGTCTTGGGTA...CGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCGGCTGGAAGGGAGGCTaGGTCTTTTCTTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: VGGASRSESKASGSGGPGGWKGG*VFSYLQ
Trigger: CTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAGCC...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR CCA 90 bp GCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCGGTGGCAGAAGCCTTTaGGAGGCCAGGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: AWPPIRWNCKDPPPVRGLGGRSL*EARRRA
Trigger: AGCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACC...GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGGGTGGCAGAAGCCTTTaGGAGGCCAGGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQGGRSL*EARRRA
Trigger: AGCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACC...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACAGTTGGCCCAGAGGCTaGAAGATGGTTTTGAACGCG +
Preference number: 4 (lower is better)
Translates to: ASANEVLGVPGAAQSRHHSWPRG*KMVLNA
Trigger: CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACT...GTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACACGGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QKVHVKWSGWKRRPRADTGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...CGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGCTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGLASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDLASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCACTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPLASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCACCACCGGTGGCTGAGTTGGCCCAGAGGCTGGAAGATGGTTTTGAACGCGCAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: AHHRWLSWPRGWKMVLNAQRPLA*VGTPRR
Trigger: CCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTG...CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCAGCCACAGAGGCCTTTaGCCTGGGTGGGAACACCCC +
Preference number: 4 (lower is better)
Translates to: LASDSLELQGPSPSKGAPSHRGL*PGWEHP
Trigger: GGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCT...GGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCATCTTGTGTCGGATaGGCTGGTTGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQWVGPPALRARPRGLEDPSCVG*AGCRSH
Trigger: GTGGCTTCTGCAACCAGCCCATCCGACACAAGATGG...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGCCATCTTGTGTCGGATaGGCTGGTTGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: HSEPRRAWKWFSHNGRPSPSCVG*AGCRSH
Trigger: GTGGCTTCTGCAACCAGCCCATCCGACACAAGATGG...CGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGAGGGCGCCCATCTTGTGTCGGATaGGCTGGTTGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ALRARPRGLEDPAFPGGRPSCVG*AGCRSH
Trigger: GTGGCTTCTGCAACCAGCCCATCCGACACAAGATGG...GCGCCCTCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GPPALRARPRGLEDPAFPAAEML*VPVSAQ
Trigger: TTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGC...CGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLEAAEML*VPVSAQ
Trigger: TTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGC...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGAGGGCGCGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ALRARPRGLEDPAFPGGRAAEML*VPVSAQ
Trigger: TTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGC...GCGCCCTCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACTGTAGTTATCCAGGATaGGGCCCTGGCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PHVAHSEPRRAWKWFSHNCSYPG*GPGSPG
Trigger: GCCAGGGCTGCCAGGGCCCCATCCTGGATAACTACA...GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACACGTGTAGTTATCCAGGATaGGGCCCTGGCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: QKVHVKWSGWKRRPRADTCSYPG*GPGSPG
Trigger: GCCAGGGCTGCCAGGGCCCCATCCTGGATAACTACA...CGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGCGTCGTGCGTGGAAGTaGTTCTCGCACAACGGGCGG +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQRRAWK*FSHNGR
Trigger: CCGCCCGTTGTGCGAGAACCACTTCCACGCACGACG...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTCAGGGAGGCCACACGTaGCGCACAGCGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVQGGHT*RTASRV
Trigger: GACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTG...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACCAGGGAGGCCACACGTaGCGCACAGCGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: ARKSCLPRRARSIPCRRNQGGHT*RTASRV
Trigger: GACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTG...GTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGGTGAAGTGGTCCGGGTaGAAGCGGCGACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: APSRVGIEWRPAREFLSVVKWSG*KRRPRA
Trigger: GGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCAC...CACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGTGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGTTGCCGGCGCGCTCCTaGAAGGACCCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GAGSKDVLAWPPIRWNCKLPARS*KDPLVS
Trigger: GCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAA...CTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCAAGGCCTCGGGGTCTaGAGGACCCGGCTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: GARTSWPGLRFAGIARTLQGLGV*RTRLFR
Trigger: CCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTG...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCGCGCTCCTGGAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGGGCCAGGAGACGGGCTaGAAGGGCTGTGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: ARSWKDPLVSGRRQKVHVGQETG*KGCDVE
Trigger: TTCAACATCACAGCCCTTCCAGCCCGTCTCCTGGCC...CACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGAGCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR CCA 90 bp GCGAGAAGCGCTCAAAGTAGCACTCGGGGCAGAAGGGGGCTCCATCCTTCTCGAGGGACGTCCGGGAGCTaGAAGCCCGGCCGTGACCAT +
Preference number: 4 (lower is better)
Translates to: ARSAQSSTRGRRGLHPSRGTSGS*KPGRDH
Trigger: ATGGTCACGGCCGGGCTTCCAGCTCCCGGACGTCCC...TCGAGAAGGATGGAGCCCCCTTCTGCCCCGAGTGCTACTTTGAGCGCTTCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567066.6
3UTR CAA 72 bp CAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATaGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QGRPGLASDSLE*QGPSPSKGAPS
Trigger: TGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCTGGGGCCTCCCGCTCTaGGAGCAAGGCCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLCGRVGLGLAGPFLNLTWGLPL*EQGLGV
Trigger: GACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCA...GGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCATGGGGCCTCCCGCTCTaGGAGCAAGGCCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPWGLPL*EQGLGV
Trigger: GACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCA...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp AGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCGACTGGTCCTCCTTCTaGTCTCCTGAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: SGRRQKVHVKWSGWKRRPDWSSF*SPEATL
Trigger: CAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTC...GGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR GCA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTTGTCTAGGCTGCCCTTaGCAGTCGGCTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPCLGCP*QSALVG
Trigger: CCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACA...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp TGGTGGGGATGGGGAGCCCTCATTTGTGGAGCTCACCACCGGTGGCTGAGTTGGTGTCTAGGCTGCCCTTaGCAGTCGGCTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WWGWGALICGAHHRWLSWCLGCP*QSALVG
Trigger: CCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACA...CCAACTCAGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCATCCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGCCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKPSRRS*CLPGRW
Trigger: CCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGG...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GARTSWPGLRFAGIARTLPSRRS*CLPGRW
Trigger: CCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGG...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCACGCGGGGCGAACAGCTaGAGGAAGTCCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSRGANS*RKSRRQ
Trigger: CTGCCGCCGGGACTTCCTGCAGCTGTTCGCCCCGCG...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACGCGGGGCGAACAGCTaGAGGAAGTCCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPRGANS*RKSRRQ
Trigger: CTGCCGCCGGGACTTCCTGCAGCTGTTCGCCCCGCG...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGAACGGGCGGCCCTCGTaGTCGAAAAAGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKNGRPS*SKKLPP
Trigger: GGGAGGCAGCTTTTTCGAGCACGAGGGCCGCCCGTT...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GTAGCACTCGGGGCAGAAGGGGGCTCCATCCTTCTCGAAGAAGCTGCTGCCTCCAACGGGCGGCCCTCGTaGTCGAAAAAGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VALGAEGGSILLEEAAASNGRPS*SKKLPP
Trigger: GGGAGGCAGCTTTTTCGAGCACGAGGGCCGCCCGTT...GGAGGCAGCAGCTTCTTCGAGAAGGATGGAGCCCCCTTCTGCCCCGAGTGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCACAGCGAGCCGCGTCGTaGGTGGAAGTGGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPQRAAS*VEVVLA
Trigger: TGCGAGAACCACTTCCACGCACGACGCGGCTCGCTG...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCAGCAATAGGTTTATTCAGCGAGCCGCGTCGTaGGTGGAAGTGGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: GVPGAAQSRHHLPSNRFIQRAAS*VEVVLA
Trigger: TGCGAGAACCACTTCCACGCACGACGCGGCTCGCTG...AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp ACTGACGCAGCAGAAATGCTCTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATGCTGGCAGTAGGGCTTaGCGGCGCGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TDAAEMLWVPVSAQGGHHAGSRA*RRAPGR
Trigger: CCTTCCAGGAGCGCGCCGGCAAGCCCTACTGCCAGC...ATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCGGCCCTCGCGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACCCGATTCGCTGGAATTaGAAGGACCCTCCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: AALALVETLISEGLPATDPIRWN*KDPPPV
Trigger: TACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG...GTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR CCA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGCCGCAGGGCGCTCTTTaGGAGCCCCTGACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVPQGAL*EPLTLA
Trigger: TGCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGG...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACGGCTGGAAGGGAGGCTaGGTCTTTTCTTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: ASANEVLGVPGAAQSRHHGWKGG*VFSYLQ
Trigger: CTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAGCC...GTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR CCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGGGCCAGGAGACGGGCTaGAAGGGAGGCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGGQETG*KGGWVF
Trigger: AAAGACCCAGCCTCCCTTCCAGCCCGTCTCCTGGCC...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCGGTGGCAGAAGCCTTTaGGAGGCCAGGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: GARTSWPGLRFAGIARTLGGRSL*EARRRA
Trigger: AGCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACC...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCCCGGCGGCTGCACCGGTGGCTGAGTTaGCCCAGAGGCTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LLQEPQRPLAWVGTPRRLHRWLS*PRGWKM
Trigger: CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTG...CAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCACACCGGTGGCTGAGTTaGCCCAGAGGCTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: ASREGREAFPADETVRVPHRWLS*PRGWKM
Trigger: CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTG...TGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AWPPIRWNCKDPPPVRGLRLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCGCCAGTCGGCTCTGGTaGGGATGGGGAGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: GARTSWPGLRFAGIARTLASRLW*GWGALI
Trigger: AATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGC...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACGCCAGTCGGCTCTGGTaGGGATGGGGAGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDASRLW*GWGALI
Trigger: AATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGC...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGCAGCAGCCCCAGCATaGTGTCTAGGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPAAAPA*CLGCPC
Trigger: GCAAGGGCAGCCTAGACACCATGCTGGGGCTGCTGC...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGGCAGCAGCCCCAGCATaGTGTCTAGGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGAAAPA*CLGCPC
Trigger: GCAAGGGCAGCCTAGACACCATGCTGGGGCTGCTGC...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTGCAGCAGCCCCAGCATaGTGTCTAGGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPAAAPA*CLGCPC
Trigger: GCAAGGGCAGCCTAGACACCATGCTGGGGCTGCTGC...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCATGCCTCCCAGGGCGGTaGAACAGCCTCCGCAAACGA +
Preference number: 4 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPCLPGR*NSLRKR
Trigger: TCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCA...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTGCAGAAGCCACATCTTaGCGAGAAGCGCTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPAAEATS*REALKV
Trigger: TACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGC...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCAGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: QTKCSGCQARPRAVTTCPAAEML*VPVSAQ
Trigger: TTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGC...TGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCGGCCCTCGCGCTCGTaGAAACCCTCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDRPSRS*KPSSPK
Trigger: CTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCG...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGCGGCCCTCGCGCTCGTaGAAACCCTCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKRPSRS*KPSSPK
Trigger: CTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCG...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCGTCGTGCGTGGAAGTaGTTCTCGCACAACGGGCGG +
Preference number: 4 (lower is better)
Translates to: GARTSWPGLRFAGIARTLRRAWK*FSHNGR
Trigger: CCGCCCGTTGTGCGAGAACCACTTCCACGCACGACG...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp ACTGACGCAGCAGAAATGCTCTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATGTGAAGTGGTCCGGGTaGAAGCGGCGACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TDAAEMLWVPVSAQGGHHVKWSG*KRRPRA
Trigger: GGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCAC...ATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp ACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: TRGAQRAASCVEVVLAQRKVHVK*SGWKRR
Trigger: TCGCCGCTTCCACCCGGACCACTTCACATGCACCTT...CCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp AGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: RQKVHVKWSGWKRRPRADKVHVK*SGWKRR
Trigger: TCGCCGCTTCCACCCGGACCACTTCACATGCACCTT...GTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTTGCCGGCGCGCTCCTaGAAGGACCCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: APSRVGIEWRPAREFLSVLPARS*KDPLVS
Trigger: GCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAA...CACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGGGTTTAGGTCTGGCTaGGCCGTTTCTGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: ALQWVGPPALRARPRGLEGFRSG*AVSELD
Trigger: GTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCC...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: WVGPPALRARPRGLEDPAVQSTL*ACGFRS
Trigger: AGACCTAAACCCACACGCCCACAAAGTGGATTGCAC...AGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCAGGGTGGGAATAGAGTaGAGGCCCGCACGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AWPPIRWNCKDPPPVRGLRVGIE*RPAREF
Trigger: GAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT...GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCATCCAGGTCCTCCATaGCGGGGCGCGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGHPGPP*RGAGRW
Trigger: CCACCGGCCCGCGCCCCGCCATGGAGGACCTGGATG...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394863.8
CDS-3UTR TCA 90 bp CCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGTGGCATTAAGTTCCTaGAGCAACCGATCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: PVGGASRSESKASGSGGPVALSS*SNRSSS
Trigger: TGAGCTAGATCGGTTGCTTCAGGAACTTAATGCCAC...GGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGCTGGAAGATGGTTTTaGACGCGGAAGTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GPPALRARPRGLEDPAFPAGRWF*TRKSES
Trigger: ACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGC...CGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTCTCACCACCGGTGGCTaGGTTGGCCCAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVLTTGG*VGPEAG
Trigger: TCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAG...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGAGGGCTCCCCGCAACTaGCGCAGCAGAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGRAPRN*RSRNAL
Trigger: CAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCT...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GGTGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: GAGSKDVLAWPPIRWNCKGARAR*APRCSY
Trigger: ATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACC...CTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGCCTGACCTTGGCATGTaGGAGGTGGTAGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQPDLGM*EVVVSR
Trigger: CCTGGAGACTACCACCTCGCACATGCCAAGGTCAGG...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CCAGCATGGTGTCTAGGCTGCCCTTGCCAGTCGGCTCTGGTGGGGATGGGGAGCGACTGGTCCTCCTTCTaGTCTCCTGAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: PAWCLGCPCQSALVGMGSDWSSF*SPEATL
Trigger: CAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTC...GCTCCCCATCCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR GCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGGCATGGTGTCTAGGCTaGCCTTGCCAGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGAWCLG*PCQSAL
Trigger: CAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGC...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCGCATGGTGTCTAGGCTaGCCTTGCCAGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GARTSWPGLRFAGIARTLAWCLG*PCQSAL
Trigger: CAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGC...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGAGAGCCGTCACCACTTaGCCAGCAATAGGTTTATTG +
Preference number: 4 (lower is better)
Translates to: QWVGPPALRARPRGLEDPRAVTT*PAIGLL
Trigger: CAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCT...CGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp AGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SNRFIAGATEAFGLGGNTTKCSG*QARPRA
Trigger: GGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGT...GGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp TGCTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACCTCCGCAAACGAAGTaGTCGGGGTGCCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: CSKKLPPEKGAKHSLQTKPPQTK*SGCQAR
Trigger: CCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGG...TTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACTCTCGAAGAAGCTGCTaGCTCCCAGGGCGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDSRRSC*LPGRWN
Trigger: GTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGA...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGTGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGCTGGGTGCCAGTGAGTaGCCAAGGCGGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: GAGSKDVLAWPPIRWNCKLGASE*PRRSPS
Trigger: AGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG...CTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGCGGGGCGAACAGCTaGAGGAAGTCCCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGRGANS*RKSRRQ
Trigger: CTGCCGCCGGGACTTCCTGCAGCTGTTCGCCCCGCG...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTACGAAACAGTCCGGGTaGCAGAGCGCGCTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVTKQSG*QSALSA
Trigger: GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGT...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCGTGCTCGAAAAAGCTaGCTCCCGAGAAGGGCGCGA +
Preference number: 4 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPRARKS*LPRRAR
Trigger: TCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCACG...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTGCTGGCAGTAGGGCTTaGCGGCGCGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGNRVEARTGVLVCVQSTAGSRA*RRAPGR
Trigger: CCTTCCAGGAGCGCGCCGGCAAGCCCTACTGCCAGC...AGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCAGACCCTGTCTGTaGCTGGTGGCCATAGGATGG +
Preference number: 4 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPPRPCL*LVAIGW
Trigger: CCATCCTATGGCCACCAGCCACAGACAGGGTCTGGG...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGCGGGGCTGCAGGCTTTaGGGACCGAGGCTTGCATAC +
Preference number: 4 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVRGCRL*GPRLAY
Trigger: GTATGCAAGCCTCGGTCCCCAAAGCCTGCAGCCCCG...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTTGCACGGGGCTGCAGGCTTTaGGGACCGAGGCTTGCATAC +
Preference number: 4 (lower is better)
Translates to: VPVSAQGGHHLVSDGLVARGCRL*GPRLAY
Trigger: GTATGCAAGCCTCGGTCCCCAAAGCCTGCAGCCCCG...TGCAACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTGGAAACCCTCATCTCGGCTGGAAGGGAGGCTaGGTCTTTTCTTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSPGGSRGGPRARGNPHLGWKGG*VFSYLQ
Trigger: CTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAGCC...GAGATGAGGGTTTCCACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR CCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGCACCGGTGGCTGAGTTaGCCCAGAGGCTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKHRWLS*PRGWKM
Trigger: CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTG...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGCACCGGTGGCTGAGTTaGCCCAGAGGCTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGHRWLS*PRGWKM
Trigger: CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTG...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTCGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LGASECPRRSPSCVGWAGRLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...ACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCACAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSQRPLA*VGTPRR
Trigger: CCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTG...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCAACTGACGCAGCAGAAATGCTCTGGGTGCCAGTGAGTGCCCAAGGCGGTCACAGCCACAGAGGCCTTTaGCCTGGGTGGGAACACCCC +
Preference number: 4 (lower is better)
Translates to: ATDAAEMLWVPVSAQGGHSHRGL*PGWEHP
Trigger: GGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCT...GTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCAACTGACGCAGCAGAAATGCTCTGGGTGCCAGTGAGTGCCCAAGGCGGTCACTGCCTCCCAGGGCGGTaGAACAGCCTCCGCAAACGA +
Preference number: 4 (lower is better)
Translates to: ATDAAEMLWVPVSAQGGHCLPGR*NSLRKR
Trigger: TCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCA...GTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGGCAGAAGCCACATCTTaGCGAGAAGCGCTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: PPRAVEQPPQTKCSGCQAAEATS*REALKV
Trigger: TACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGC...CGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTTTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: GTASANEVLGVPGAAQSRLCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...ACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCAGGGCCGACACGCCATCTTGTGTCGGATaGGCTGGTTGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QKVHVKWSGWKRRPRADTPSCVG*AGCRSH
Trigger: GTGGCTTCTGCAACCAGCCCATCCGACACAAGATGG...CGTGTCGGCCCTGGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGCGGCCCTCGCGCTCGTaGAAACCCTCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: APSRVGIEWRPAREFLSVRPSRS*KPSSPK
Trigger: CTTCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCG...CACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGGCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGAGCCGCGTCGTGCGTaGAAGTGGTTCTCGCACAAC +
Preference number: 4 (lower is better)
Translates to: GAPSRVGIEWRPAREFLSEPRRA*KWFSHN
Trigger: GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTC...AGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACTTGCCGGCGCGCTCCTaGAAGGACCCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ARKSCLPRRARSIPCRRNLPARS*KDPLVS
Trigger: GCTCACCAAGGGGTCCTTCCAGGAGCGCGCCGGCAA...GTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp AGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGCAAGGCCTCGGGGTCTaGAGGACCCGGCTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: SGGPHGSSCLCAIHFVGVQGLGV*RTRLFR
Trigger: CCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTG...CACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCAGGGTGGGAATAGAGTaGAGGCCCGCACGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GARTSWPGLRFAGIARTLRVGIE*RPAREF
Trigger: GAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGAGGGTGGGAATAGAGTaGAGGCCCGCACGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKRVGIE*RPAREF
Trigger: GAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCAAGGACGTCCTGGCCTaGCCTCCGATTCGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AWPPIRWNCKDPPPVRGLKDVLA*PPIRWN
Trigger: ATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT...GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CAA 72 bp CCAGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PAIGLLQEPQRP*AWVGTPRRLRS
Trigger: CGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp GCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCCTGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: AIGLLQEPQRPLAWVGTPCSGCQ*VPKAVT
Trigger: GGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCA...GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp TCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTGCTCGAAAAAGCTGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: SCVEVVLAQRAALVLEKAGARAR*APRCSY
Trigger: ATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACC...AGCTTTTTCGAGCACGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTCCTCCGCAAACGAAGTaGTCGGGGTGCCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLPPQTK*SGCQAR
Trigger: CCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGG...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGCTGGGTGCCAGTGAGTaGCCAAGGCGGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVLGASE*PRRSPS
Trigger: AGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGACGAAACAGTCCGGGTaGCAGAGCGCGCTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: VCNPLCGRVGLGLAGPFLTKQSG*QSALSA
Trigger: GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGT...CAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTCCGCAGGGCGCTCTTTaGGAGCCCCTGACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GGNRVEARTGVLVCVQSTPQGAL*EPLTLA
Trigger: TGCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGG...AGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGACCGTGCTGTACAGGTaGTCCTTGTCCCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVTVLYR*SLSPEA
Trigger: AGCCTCGGGGGACAAGGACCACCTGTACAGCACGGT...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTACCCAAGACACCGCTaGAAGAGGAGAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQYPRHR*KRRMEG
Trigger: CCCCTCCATTCTCCTCTTCCAGCGGTGTCTTGGGTA...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp ATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCCCGGGGCCAGGAGACGGGCTaGAAGGGAGGCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: IGLLQEPQRPLAWVGTPRGQETG*KGGWVF
Trigger: AAAGACCCAGCCTCCCTTCCAGCCCGTCTCCTGGCC...CCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR CCA 90 bp GCTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACGGCCAGGAGACGGGCTaGAAGGGAGGCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: ARKSCLPRRARSIPCRRNGQETG*KGGWVF
Trigger: AAAGACCCAGCCTCCCTTCCAGCCCGTCTCCTGGCC...GTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR CCA 90 bp AGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGGGTGGCAGAAGCCTTTaGGAGGCCAGGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: SGGPHGSSCLCAIHFVGVGGRSL*EARRRA
Trigger: AGCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACC...CACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTCAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLQRPLA*VGTPRR
Trigger: CCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTG...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTTGCATGTAGTTATCCAGGATaGGGCCCTGGCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VPVSAQGGHHLVSDGLVACSYPG*GPGSPG
Trigger: GCCAGGGCTGCCAGGGCCCCATCCTGGATAACTACA...TGCAACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAAGAGCCGCGTCGTGCGTaGAAGTGGTTCTCGCACAAC +
Preference number: 4 (lower is better)
Translates to: RSWKPSSPKGSPQLTQQKEPRRA*KWFSHN
Trigger: GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTC...TTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCAGGGAGGCCACACGTaGCGCACAGCGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGQGGHT*RTASRV
Trigger: GACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTG...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKKVHVK*SGWKRR
Trigger: TCGCCGCTTCCACCCGGACCACTTCACATGCACCTT...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGCAAGGCCTCGGGGTCTaGAGGACCCGGCTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: VCNPLCGRVGLGLAGPFLQGLGV*RTRLFR
Trigger: CCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTG...CAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTGAGCGCCGGGTTTAGGTCTGGCTaGGCCGTTTCTGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: AKHSLQTKQSGCQSALSAGFRSG*AVSELD
Trigger: GTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCC...GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR CCA 90 bp CGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAAAGGGTGGGAATAGAGTaGAGGCCCGCACGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RSWKPSSPKGSPQLTQQKRVGIE*RPAREF
Trigger: GAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT...TTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR CCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGGCCTCCGATTCGCTaGAATTGCAAGGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGWPPIR*NCKDPP
Trigger: GGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCA...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCATGGCCTCCGATTCGCTaGAATTGCAAGGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPWPPIR*NCKDPP
Trigger: GGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCA...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACAAGGACGTCCTGGCCTaGCCTCCGATTCGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDKDVLA*PPIRWN
Trigger: ATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp TCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTGTGGCATTAAGTTCCTaGAGCAACCGATCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SQGGHTWRTASRVVRGSGVALSS*SNRSSS
Trigger: TGAGCTAGATCGGTTGCTTCAGGAACTTAATGCCAC...ACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGGCGGAAGTCAGAGAGTaGGGCCATCAGTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGAEVRE*GHQSIQ
Trigger: CTGGATAGACTGATGGCCTCACTCTCTGACTTCCGC...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTGCGGAAGTCAGAGAGTaGGGCCATCAGTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPAEVRE*GHQSIQ
Trigger: CTGGATAGACTGATGGCCTCACTCTCTGACTTCCGC...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp AGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCTGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: SNRFIAGATEAFGLGGNTCSGCQ*VPKAVT
Trigger: GGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCA...GGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGTGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGCSGCQ*VPKAVT
Trigger: GGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCA...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGAAGTGCACAGAACAGTaGGGGTGCAGGGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKKCTEQ*GCREQG
Trigger: TCCTTGCTCCCTGCACCCTCACTGTTCTGTGCACTT...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR TCA 90 bp GGTGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGAAGTGCACAGAACAGTaGGGGTGCAGGGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GAGSKDVLAWPPIRWNCKKCTEQ*GCREQG
Trigger: TCCTTGCTCCCTGCACCCTCACTGTTCTGTGCACTT...CTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR GCA 90 bp CGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAACCTGACCTTGGCATGTaGGAGGTGGTAGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSWKPSSPKGSPQLTQQKPDLGM*EVVVSR
Trigger: CCTGGAGACTACCACCTCGCACATGCCAAGGTCAGG...TTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000564804.1
CDS-3UTR GCA 90 bp GGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCAGCAATAGGTTTATTTTGGGGACCGAGGCTTaGATACCGTGCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: GVPGAAQSRHHLPSNRFILGTEA*IPCCTG
Trigger: ACCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAA...AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGTTGGGGACCGAGGCTTaGATACCGTGCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKLGTEA*IPCCTG
Trigger: ACCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAA...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGCCTCCGCAAACGAAGTaGTCGGGGTGCCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLPPQTK*SGCQAR
Trigger: CCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGG...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTCTCGAAGAAGCTGCTaGCTCCCAGGGCGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVSRRSC*LPGRWN
Trigger: GTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGA...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACCTTCTCGAAGAAGCTaGTGCCTCCCAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPPSRRS*CLPGRW
Trigger: CCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGAAGG...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGACGAAACAGTCCGGGTaGCAGAGCGCGCTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGTKQSG*QSALSA
Trigger: GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGT...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GCTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACCGTGCTCGAAAAAGCTaGCTCCCGAGAAGGGCGCGA +
Preference number: 4 (lower is better)
Translates to: ARKSCLPRRARSIPCRRNRARKS*LPRRAR
Trigger: TCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCACG...GTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTCAGCGAGCCGCGTCGTaGGTGGAAGTGGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: GGNRVEARTGVLVCVQSTQRAAS*VEVVLA
Trigger: TGCGAGAACCACTTCCACGCACGACGCGGCTCGCTG...AGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGGCTGGCAGTAGGGCTTaGCGGCGCGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGAGSRA*RRAPGR
Trigger: CCTTCCAGGAGCGCGCCGGCAAGCCCTACTGCCAGC...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGCCGATTCGCTGGAATTaGAAGGACCCTCCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKPIRWN*KDPPPV
Trigger: TACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACACCGTGCTGTACAGGTaGTCCTTGTCCCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: ARKSCLPRRARSIPCRRNTVLYR*SLSPEA
Trigger: AGCCTCGGGGGACAAGGACCACCTGTACAGCACGGT...GTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTGCTGGAAGAGGAGAATaGAGGGGCCGCCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AREFLSVCNPLCGRVGLGAGRGE*RGRRGC
Trigger: GCAGCCCCGGCGGCCCCTCCATTCTCCTCTTCCAGC...ACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGCTGGAAGAGGAGAATaGAGGGGCCGCCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCAGRGE*RGRRGC
Trigger: GCAGCCCCGGCGGCCCCTCCATTCTCCTCTTCCAGC...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TTGCCCAGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGGGTGGCAGAAGCCTTTaGGAGGCCAGGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: LPSNRFIAGATEAFGLGGGGRSL*EARRRA
Trigger: AGCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACC...CCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GAAGGACCCCTTGGTGAGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGAGTTGGCCCAGAGGCTaGAAGATGGTTTTGAACGCG +
Preference number: 4 (lower is better)
Translates to: EGPLGERAQAEGACEVVRSWPRG*KMVLNA
Trigger: CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACT...CCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCTCACCAAGGGGTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCAGCCAGTCGGCTCTGGTaGGGATGGGGAGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSASRLW*GWGALI
Trigger: AATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGC...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCCGCCAGTCGGCTCTGGTaGGGATGGGGAGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: AIGLLQEPQRPLAWVGTPASRLW*GWGALI
Trigger: AATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGC...GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTCAGAGGCCTTTGGCCTaGGTGGGAACACCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCQRPLA*VGTPRR
Trigger: CCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTG...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAGCCACAGAGGCCTTTaGCCTGGGTGGGAACACCCC +
Preference number: 4 (lower is better)
Translates to: VCNPLCGRVGLGLAGPFLSHRGL*PGWEHP
Trigger: GGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCT...CAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TTGCCCAGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAGCCACAGAGGCCTTTaGCCTGGGTGGGAACACCCC +
Preference number: 4 (lower is better)
Translates to: LPSNRFIAGATEAFGLGGSHRGL*PGWEHP
Trigger: GGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCT...CCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCTGCCTCCCAGGGCGGTaGAACAGCCTCCGCAAACGA +
Preference number: 4 (lower is better)
Translates to: PLCGRVGLGLAGPFLNLTCLPGR*NSLRKR
Trigger: TCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCA...GGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTGAGCGCCGCAGAAGCCACATCTTaGCGAGAAGCGCTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: AKHSLQTKQSGCQSALSAAEATS*REALKV
Trigger: TACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGC...GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp CCAGCATGGTGTCTAGGCTGCCCTTGCCAGTCGGCTCTGGTGGGGATGGGGAGCTTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: PAWCLGCPCQSALVGMGSLCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...GCTCCCCATCCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGGGCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GAPSRVGIEWRPAREFLSAAEML*VPVSAQ
Trigger: TTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGC...AGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTGAGCCGCGTCGTGCGTaGAAGTGGTTCTCGCACAAC +
Preference number: 4 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVEPRRA*KWFSHN
Trigger: GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTC...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGGAGCCGCGTCGTGCGTaGAAGTGGTTCTCGCACAAC +
Preference number: 4 (lower is better)
Translates to: SGGPHGSSCLCAIHFVGVEPRRA*KWFSHN
Trigger: GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTC...CACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCAGGAGCAAGGACGTCCTaGCCTGGCCTCCGATTCGCT +
Preference number: 4 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPGARTS*PGLRFA
Trigger: AGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGGGAGCAAGGACGTCCTaGCCTGGCCTCCGATTCGCT +
Preference number: 4 (lower is better)
Translates to: VCNPLCGRVGLGLAGPFLGARTS*PGLRFA
Trigger: AGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC...CAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CAA 72 bp GCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: ARTGVLVCVQST*WACGFRSGWAV
Trigger: AACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CAA 72 bp CCCAGAGCCGTCACCACTTGCCCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PRAVTTCPAIGL*QEPQRPLAWVG
Trigger: TCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp CTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCGCTGGAAGATGGTTTTaGACGCGGAAGTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LASDSLELQGPSPSKGAPAGRWF*TRKSES
Trigger: ACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGC...GGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGGCTGGAAGATGGTTTTaGACGCGGAAGTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQAGRWF*TRKSES
Trigger: ACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGC...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GGAAGGGAGGCTGGGTCTTTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCTCCCTCACCACCGGTGGCTaGGTTGGCCCAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GREAGSFLIFRLVLLLLSLTTGG*VGPEAG
Trigger: TCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAG...GGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGCCTCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR TCA 90 bp GTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGTGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: VLVCVQSTLWACGFRSGWCSGCQ*VPKAVT
Trigger: GGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCA...CCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCAAGGGCTCCCCGCAACTaGCGCAGCAGAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSRAPRN*RSRNAL
Trigger: CAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCT...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCAGGCAGAAGGTGCATGTaGAGTGGTCCGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSGRRCM*SGPGGS
Trigger: GCTTCCACCCGGACCACTTCACATGCACCTTCTGCC...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGTTGGGGACCGAGGCTTaGATACCGTGCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVLGTEA*IPCCTG
Trigger: ACCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAA...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGTGTCTAGGCTGCCCTTaGCAGTCGGCTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGCLGCP*QSALVG
Trigger: CCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACA...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACAGCATGGTGTCTAGGCTaGCCTTGCCAGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LEKAASREGREAFPADETAWCLG*PCQSAL
Trigger: CAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGC...TGTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCGGCTGAGGTCGGACTaGAGCAGCCCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGRLRSD*SSPSMV
Trigger: CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCG...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACAGAGCCGTCACCACTTaGCCAGCAATAGGTTTATTG +
Preference number: 4 (lower is better)
Translates to: PHVAHSEPRRAWKWFSHNRAVTT*PAIGLL
Trigger: CAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCT...GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp GGGAGGCTGGGTCTTTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCTCCTGAACCTCCGCAAACGAAGTaGTCGGGGTGCCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GRLGLFLSSDWSSFCSPEPPQTK*SGCQAR
Trigger: CCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGG...TTCAGGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR GCA 90 bp GGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTCTCGAAGAAGCTGCTaGCTCCCAGGGCGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GGNRVEARTGVLVCVQSTSRRSC*LPGRWN
Trigger: GTTCCACCGCCCTGGGAGGCAGCAGCTTCTTCGAGA...AGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGAAGGGAGGCTGGGTCTTTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCTCCACGAAACAGTCCGGGTaGCAGAGCGCGCTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GREAGSFLIFRLVLLLLSTKQSG*QSALSA
Trigger: GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGT...GGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGCCTCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR GCA 90 bp GTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGCGTGCTCGAAAAAGCTaGCTCCCGAGAAGGGCGCGA +
Preference number: 4 (lower is better)
Translates to: VCNPLCGRVGLGLAGPFLRARKS*LPRRAR
Trigger: TCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCACG...CAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGAACGGGCGGCCCTCGTaGTCGAAAAAGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGNGRPS*SKKLPP
Trigger: GGGAGGCAGCTTTTTCGAGCACGAGGGCCGCCCGTT...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGAACGGGCGGCCCTCGTaGTCGAAAAAGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLNGRPS*SKKLPP
Trigger: GGGAGGCAGCTTTTTCGAGCACGAGGGCCGCCCGTT...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGAGGCTGGGTCTTTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCTCCTGAAGCTGGCAGTAGGGCTTaGCGGCGCGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GRLGLFLSSDWSSFCSPEAGSRA*RRAPGR
Trigger: CCTTCCAGGAGCGCGCCGGCAAGCCCTACTGCCAGC...TTCAGGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR GCA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGCCGATTCGCTGGAATTaGAAGGACCCTCCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVPIRWN*KDPPPV
Trigger: TACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCATCAGAGAGCAGGGCATaGTTGGAGCCAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPSESRA*LEPSTN
Trigger: GTTTGTGCTTGGCTCCAAGCATGCCCTGCTCTCTGA...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394858.6
CDS-3UTR CCA 90 bp CCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCCAGACCCTGTCTGTaGCTGGTGGCCATAGGATGG +
Preference number: 4 (lower is better)
Translates to: PLCGRVGLGLAGPFLNLTPRPCL*LVAIGW
Trigger: CCATCCTATGGCCACCAGCCACAGACAGGGTCTGGG...GGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCAACCGTGCTGTACAGGTaGTCCTTGTCCCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSTVLYR*SLSPEA
Trigger: AGCCTCGGGGGACAAGGACCACCTGTACAGCACGGT...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGTACCCAAGACACCGCTaGAAGAGGAGAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVYPRHR*KRRMEG
Trigger: CCCCTCCATTCTCCTCTTCCAGCGGTGTCTTGGGTA...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTGGCCAGGAGACGGGCTaGAAGGGAGGCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLGQETG*KGGWVF
Trigger: AAAGACCCAGCCTCCCTTCCAGCCCGTCTCCTGGCC...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCAGCAATAGGTTTATTAGTTGGCCCAGAGGCTaGAAGATGGTTTTGAACGCG +
Preference number: 4 (lower is better)
Translates to: GVPGAAQSRHHLPSNRFISWPRG*KMVLNA
Trigger: CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACT...AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCAGTTGGCCCAGAGGCTaGAAGATGGTTTTGAACGCG +
Preference number: 4 (lower is better)
Translates to: GARTSWPGLRFAGIARTLSWPRG*KMVLNA
Trigger: CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACT...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGGTGGCTGAGTTGGCCCAGAGGCTGGAAGATGGTTTTGAACGCGGAAGTCAGACACCGGTGGCTGAGTTaGCCCAGAGGCTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RWLSWPRGWKMVLNAEVRHRWLS*PRGWKM
Trigger: CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTG...TCTGACTTCCGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACTCAGCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGCGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VCNPLCGRVGLGLAGPFLRLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...CAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAAGCCAGTCGGCTCTGGTaGGGATGGGGAGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: VQSTLWACGFRSGWAVSEASRLW*GWGALI
Trigger: AATGAGGGCTCCCCATCCCCACCAGAGCCGACTGGC...TTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AREFLSVCNPLCGRVGLGLASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...ACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTCTTGCCAGTCGGCTCTaGTGGGGATGGGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCLASRL*WGWGAL
Trigger: GAGGGCTCCCCATCCCCACCAGAGCCGACTGGCAAG...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGCCTCCCAGGGCGGTaGAACAGCCTCCGCAAACGA +
Preference number: 4 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLCLPGR*NSLRKR
Trigger: TCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGGCA...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCGCAGAAGCCACATCTTaGCGAGAAGCGCTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: AWPPIRWNCKDPPPVRGLAEATS*REALKV
Trigger: TACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGC...GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGGCAGAAGCCACATCTTaGCGAGAAGCGCTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQAEATS*REALKV
Trigger: TACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGC...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGCCATCTTGTGTCGGATaGGCTGGTTGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: APSRVGIEWRPAREFLSVPSCVG*AGCRSH
Trigger: GTGGCTTCTGCAACCAGCCCATCCGACACAAGATGG...CACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTCGTCGTGCGTGGAAGTaGTTCTCGCACAACGGGCGG +
Preference number: 4 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLRRAWK*FSHNGR
Trigger: CCGCCCGTTGTGCGAGAACCACTTCCACGCACGACG...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTGGGTTTAGGTCTGGCTaGGCCGTTTCTGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPGFRSG*AVSELD
Trigger: GTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCC...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGGCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGGGTTTAGGTCTGGCTaGGCCGTTTCTGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: GAPSRVGIEWRPAREFLSGFRSG*AVSELD
Trigger: GTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCC...AGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: LASDSLELQGPSPSKGAPVQSTL*ACGFRS
Trigger: AGACCTAAACCCACACGCCCACAAAGTGGATTGCAC...GGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQVQSTL*ACGFRS
Trigger: AGACCTAAACCCACACGCCCACAAAGTGGATTGCAC...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTGGAGCAAGGACGTCCTaGCCTGGCCTCCGATTCGCT +
Preference number: 4 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLGARTS*PGLRFA
Trigger: AGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGGTGGCATTAAGTTCCTaGAGCAACCGATCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQVALSS*SNRSSS
Trigger: TGAGCTAGATCGGTTGCTTCAGGAACTTAATGCCAC...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTGCTGGAAGATGGTTTTaGACGCGGAAGTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPAGRWF*TRKSES
Trigger: ACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGC...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGGGCAGAAGGTGCATGTaGAGTGGTCCGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGGRRCM*SGPGGS
Trigger: GCTTCCACCCGGACCACTTCACATGCACCTTCTGCC...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTAAGTGCACAGAACAGTaGGGGTGCAGGGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVKCTEQ*GCREQG
Trigger: TCCTTGCTCCCTGCACCCTCACTGTTCTGTGCACTT...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR GCA 90 bp GTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGCCTGACCTTGGCATGTaGGAGGTGGTAGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VCNPLCGRVGLGLAGPFLPDLGM*EVVVSR
Trigger: CCTGGAGACTACCACCTCGCACATGCCAAGGTCAGG...CAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GAAGCGCTCAAAGTAGCACTCGGGGCAGAAGGGGGCTCCATCCTTCTCGAAGAACCTGACCTTGGCATGTaGGAGGTGGTAGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EALKVALGAEGGSILLEEPDLGM*EVVVSR
Trigger: CCTGGAGACTACCACCTCGCACATGCCAAGGTCAGG...TTCTTCGAGAAGGATGGAGCCCCCTTCTGCCCCGAGTGCTACTTTGAGCGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000564804.1
CDS-3UTR GCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTTGTCTAGGCTGCCCTTaGCAGTCGGCTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCCLGCP*QSALVG
Trigger: CCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACA...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTTGTCTAGGCTGCCCTTaGCAGTCGGCTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AREFLSVCNPLCGRVGLGCLGCP*QSALVG
Trigger: CCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACA...ACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTGCATGGTGTCTAGGCTaGCCTTGCCAGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLAWCLG*PCQSAL
Trigger: CAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGC...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAAGCATGGTGTCTAGGCTaGCCTTGCCAGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VQSTLWACGFRSGWAVSEAWCLG*PCQSAL
Trigger: CAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGC...TTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCAGCGAGCCGCGTCGTaGGTGGAAGTGGTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: AREFLSVCNPLCGRVGLGQRAAS*VEVVLA
Trigger: TGCGAGAACCACTTCCACGCACGACGCGGCTCGCTG...ACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCGAGTTCTTGTCTGTGTaGAATCCACTTTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: AWPPIRWNCKDPPPVRGLEFLSV*NPLCGR
Trigger: ACGCCCACAAAGTGGATTGCACACAGACAAGAACTC...GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGCGGGGCTGCAGGCTTTaGGGACCGAGGCTTGCATAC +
Preference number: 4 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLRGCRL*GPRLAY
Trigger: GTATGCAAGCCTCGGTCCCCAAAGCCTGCAGCCCCG...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGGCCAGGAGACGGGCTaGAAGGGAGGCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLGQETG*KGGWVF
Trigger: AAAGACCCAGCCTCCCTTCCAGCCCGTCTCCTGGCC...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGCGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLRLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGAGCCACAGAGGCCTTTaGCCTGGGTGGGAACACCCC +
Preference number: 4 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLSHRGL*PGWEHP
Trigger: GGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCT...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGAGCCACAGAGGCCTTTaGCCTGGGTGGGAACACCCC +
Preference number: 4 (lower is better)
Translates to: VLVCVQSTLWACGFRSGWSHRGL*PGWEHP
Trigger: GGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCT...CCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACGCAGAAGCCACATCTTaGCGAGAAGCGCTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDAEATS*REALKV
Trigger: TACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGC...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTTTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPLCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ARKSCLPRRARSIPCRRNAAEML*VPVSAQ
Trigger: TTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGC...GTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CCA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGTAGTTATCCAGGATaGGGCCCTGGCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLCSYPG*GPGSPG
Trigger: GCCAGGGCTGCCAGGGCCCCATCCTGGATAACTACA...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGGAGCCGCGTCGTGCGTaGAAGTGGTTCTCGCACAAC +
Preference number: 4 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLEPRRA*KWFSHN
Trigger: GTTGTGCGAGAACCACTTCCACGCACGACGCGGCTC...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCAAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPKVHVK*SGWKRR
Trigger: TCGCCGCTTCCACCCGGACCACTTCACATGCACCTT...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTGGCCTCCGATTCGCTaGAATTGCAAGGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGNRVEARTGVLVCVQSTWPPIR*NCKDPP
Trigger: GGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCA...AGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTAAGGACGTCCTGGCCTaGCCTCCGATTCGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: GGNRVEARTGVLVCVQSTKDVLA*PPIRWN
Trigger: ATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT...AGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
3UTR CAA 72 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTaGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RVGIEWRPAREF*SVCNPLCGRVG
Trigger: ACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGGTGGCATTAAGTTCCTaGAGCAACCGATCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGVALSS*SNRSSS
Trigger: TGAGCTAGATCGGTTGCTTCAGGAACTTAATGCCAC...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCGCGGAAGTCAGAGAGTaGGGCCATCAGTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: PLCGRVGLGLAGPFLNLTAEVRE*GHQSIQ
Trigger: CTGGATAGACTGATGGCCTCACTCTCTGACTTCCGC...GGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp TCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTGCTCGAAAAAGCTGCTGGAAGATGGTTTTaGACGCGGAAGTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SCVEVVLAQRAALVLEKAAGRWF*TRKSES
Trigger: ACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGC...AGCTTTTTCGAGCACGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGAGGGCTCCCCGCAACTaGCGCAGCAGAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGRAPRN*RSRNAL
Trigger: CAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCT...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTGGTGCCAGAGCGCGCTaGGCGCCGAGATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: AREFLSVCNPLCGRVGLGGARAR*APRCSY
Trigger: ATAACTACATCTCGGCGCTCAGCGCGCTCTGGCACC...ACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGGGCAGAAGGTGCATGTaGAGTGGTCCGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGGRRCM*SGPGGS
Trigger: GCTTCCACCCGGACCACTTCACATGCACCTTCTGCC...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACCTGACCTTGGCATGTaGGAGGTGGTAGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VQSTLWACGFRSGWAVSEPDLGM*EVVVSR
Trigger: CCTGGAGACTACCACCTCGCACATGCCAAGGTCAGG...TTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGGACTGGTCCTCCTTCTaGTCTCCTGAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: VCNPLCGRVGLGLAGPFLDWSSF*SPEATL
Trigger: CAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTC...CAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR GCA 90 bp AGGCTGGAAGATGGTTTTGAACGCGGAAGTCAGAGAGTGAGGCCATCAGTCTATCGGCTGAGGTCGGACTaGAGCAGCCCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: RLEDGFERGSQRVRPSVYRLRSD*SSPSMV
Trigger: CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCG...ATAGACTGATGGCCTCACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR GCA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCAGAGCCGTCACCACTTaGCCAGCAATAGGTTTATTG +
Preference number: 4 (lower is better)
Translates to: GARTSWPGLRFAGIARTLRAVTT*PAIGLL
Trigger: CAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCT...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GTAGCACTCGGGGCAGAAGGGGGCTCCATCCTTCTCGAAGAAGCTGCTGCCTCCAGAGCCGTCACCACTTaGCCAGCAATAGGTTTATTG +
Preference number: 4 (lower is better)
Translates to: VALGAEGGSILLEEAAASRAVTT*PAIGLL
Trigger: CAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCT...GGAGGCAGCAGCTTCTTCGAGAAGGATGGAGCCCCCTTCTGCCCCGAGTGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR GCA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGAGAGCCGTCACCACTTaGCCAGCAATAGGTTTATTG +
Preference number: 4 (lower is better)
Translates to: RPGLASDSLELQGPSPSKRAVTT*PAIGLL
Trigger: CAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCT...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTCTGGGTGCCAGTGAGTaGCCAAGGCGGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCLGASE*PRRSPS
Trigger: AGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGCTGGGTGCCAGTGAGTaGCCAAGGCGGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLLGASE*PRRSPS
Trigger: AGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTCGTGCTCGAAAAAGCTaGCTCCCGAGAAGGGCGCGA +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCRARKS*LPRRAR
Trigger: TCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCACG...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCTACCCAAGACACCGCTaGAAGAGGAGAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PLCGRVGLGLAGPFLNLTYPRHR*KRRMEG
Trigger: CCCCTCCATTCTCCTCTTCCAGCGGTGTCTTGGGTA...GGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGGGCTGGAAGGGAGGCTaGGTCTTTTCTTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: APSRVGIEWRPAREFLSVGWKGG*VFSYLQ
Trigger: CTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAGCC...CACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR CCA 90 bp GTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGGGAGCCCTCATTTGTaGAGCTCACCACCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VLVCVQSTLWACGFRSGWGSPHL*SSPPVA
Trigger: AGCCACCGGTGGTGAGCTCCACAAATGAGGGCTCCC...CCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTCGGCTCTGGTGGGGATaGGGAGCCCTCATTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCRLWWG*GALICG
Trigger: TCCACAAATGAGGGCTCCCCATCCCCACCAGAGCCG...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGTGTAGTTATCCAGGATaGGGCCCTGGCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGCSYPG*GPGSPG
Trigger: GCCAGGGCTGCCAGGGCCCCATCCTGGATAACTACA...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAAAAGGTGCATGTGAAGTaGTCCGGGTGGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: VQSTLWACGFRSGWAVSEKVHVK*SGWKRR
Trigger: TCGCCGCTTCCACCCGGACCACTTCACATGCACCTT...TTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGAGGGTGGGAATAGAGTaGAGGCCCGCACGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGRVGIE*RPAREF
Trigger: GAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGAAGGACGTCCTGGCCTaGCCTCCGATTCGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGKDVLA*PPIRWN
Trigger: ATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp ACTGACGCAGCAGAAATGCTCTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATTTTCATCTGTACAGGTaGTCCTTGTCCCCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TDAAEMLWVPVSAQGGHHFHLYR*SLSPEA
Trigger: AGCCTCGGGGGACAAGGACCACCTGTACAGATGAAA...ATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563712.6
3UTR CAA 72 bp TCTTGTGTCGGATGGGCTGGTTGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGTAGCACTCGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SCVGWAGCRSHI*ARSAQSSTRGR
Trigger: TCTGCCCCGAGTGCTACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCAACCAGCCCATCCGACACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGGTGGCATTAAGTTCCTaGAGCAACCGATCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVVALSS*SNRSSS
Trigger: TGAGCTAGATCGGTTGCTTCAGGAACTTAATGCCAC...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp CTCATTTGTGGAGCTCACCACCGGTGGCTGAGTTGGCCCAGAGGCTGGAAGATGGCTGGAAGATGGTTTTaGACGCGGAAGTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LICGAHHRWLSWPRGWKMAGRWF*TRKSES
Trigger: ACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGC...CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAGCTCCACAAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp CTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGTCGGATGGGCTGGTATGGGAACTGAGACATaGTTTCATCTGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGASECPRRSPSCVGWAGMGTET*FHLYRW
Trigger: CCACCTGTACAGATGAAATCATGTCTCAGTTCCCAT...ACCAGCCCATCCGACACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563712.6
CDS-3UTR GCA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTTGGGGACCGAGGCTTaGATACCGTGCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLLGTEA*IPCCTG
Trigger: ACCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAA...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAAGACTGGTCCTCCTTCTaGTCTCCTGAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: VQSTLWACGFRSGWAVSEDWSSF*SPEATL
Trigger: CAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTC...TTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR GCA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGAGAGCCGTCACCACTTaGCCAGCAATAGGTTTATTG +
Preference number: 4 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVRAVTT*PAIGLL
Trigger: CAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCT...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTACCCAAGACACCGCTaGAAGAGGAGAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLYPRHR*KRRMEG
Trigger: CCCCTCCATTCTCCTCTTCCAGCGGTGTCTTGGGTA...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAGTTGGCCCAGAGGCTaGAAGATGGTTTTGAACGCG +
Preference number: 4 (lower is better)
Translates to: VCNPLCGRVGLGLAGPFLSWPRG*KMVLNA
Trigger: CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACT...CAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCAAGTTGGCCCAGAGGCTaGAAGATGGTTTTGAACGCG +
Preference number: 4 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSSWPRG*KMVLNA
Trigger: CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACT...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVLCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp ATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCCCGGTTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: IGLLQEPQRPLAWVGTPRLCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...CCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR TCA 90 bp TTTATTGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCCCGGCGGCTTTGCTAGATGGGAACTaGGACATGATTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: FIAGATEAFGLGGNTPAALLDGN*DMISSV
Trigger: CACAGATGAAATCATGTCTCAGTTCCCATCTAGCAA...AGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567066.6
CDS-3UTR TCA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCGGAAGTCAGAGAGTaGGGCCATCAGTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLAEVRE*GHQSIQ
Trigger: CTGGATAGACTGATGGCCTCACTCTCTGACTTCCGC...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GCTGGAAGGGAGGCTGGGTCTTTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCGCGGAAGTCAGAGAGTaGGGCCATCAGTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: AGREAGSFLIFRLVLLLLAEVRE*GHQSIQ
Trigger: CTGGATAGACTGATGGCCTCACTCTCTGACTTCCGC...GAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR GCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTTTGGGGACCGAGGCTTaGATACCGTGCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCLGTEA*IPCCTG
Trigger: ACCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAA...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GCTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACGAGTTCTTGTCTGTGTaGAATCCACTTTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: ARKSCLPRRARSIPCRRNEFLSV*NPLCGR
Trigger: ACGCCCACAAAGTGGATTGCACACAGACAAGAACTC...GTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR GCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTCCGATTCGCTGGAATTaGAAGGACCCTCCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCPIRWN*KDPPPV
Trigger: TACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCATTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPLCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCATCTTGTGTCGGATaGGCTGGTTGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGPSCVG*AGCRSH
Trigger: GTGGCTTCTGCAACCAGCCCATCCGACACAAGATGG...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAAGGGAGGCTGGGTCTTTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCTCCCCATCTTGTGTCGGATaGGCTGGTTGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GREAGSFLIFRLVLLLLSPSCVG*AGCRSH
Trigger: GTGGCTTCTGCAACCAGCCCATCCGACACAAGATGG...GGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAGACCCAGCCTCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR CCA 90 bp GCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: AREFLSVCNPLCGRVGLGAAEML*VPVSAQ
Trigger: TTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGC...ACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp CCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLCGRVGLGLAGPFLNLTVQSTL*ACGFRS
Trigger: AGACCTAAACCCACACGCCCACAAAGTGGATTGCAC...GGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTTGCTAGATGGGAACTaGGACATGATTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: APSRVGIEWRPAREFLSVLLDGN*DMISSV
Trigger: CACAGATGAAATCATGTCTCAGTTCCCATCTAGCAA...CACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR TCA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTGCTGGAAGATGGTTTTaGACGCGGAAGTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLAGRWF*TRKSES
Trigger: ACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGC...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTGAGTTCTTGTCTGTGTaGAATCCACTTTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: GGNRVEARTGVLVCVQSTEFLSV*NPLCGR
Trigger: ACGCCCACAAAGTGGATTGCACACAGACAAGAACTC...AGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGGGGTTTAGGTCTGGCTaGGCCGTTTCTGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGGFRSG*AVSELD
Trigger: GTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCC...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGGTGCAATCCACTTTGTaGGCGTGTGGGTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLVQSTL*ACGFRS
Trigger: AGACCTAAACCCACACGCCCACAAAGTGGATTGCAC...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAAAGAGCCGTCACCACTTaGCCAGCAATAGGTTTATTG +
Preference number: 4 (lower is better)
Translates to: VQSTLWACGFRSGWAVSERAVTT*PAIGLL
Trigger: CAATAAACCTATTGCTGGGCAAGTGGTGACGGCTCT...TTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR GCA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGGAGTTCTTGTCTGTGTaGAATCCACTTTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLEFLSV*NPLCGR
Trigger: ACGCCCACAAAGTGGATTGCACACAGACAAGAACTC...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGCTGGAAGGGAGGCTaGGTCTTTTCTTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCGWKGG*VFSYLQ
Trigger: CTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAGCC...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR CCA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGGCTGGAAGGGAGGCTaGGTCTTTTCTTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLGWKGG*VFSYLQ
Trigger: CTGAAGATAAGAAAAGACCCAGCCTCCCTTCCAGCC...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR CCA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGTTGTGTCGGATGGGCTaGTTGCAGAAGCCACATCTT +
Preference number: 4 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLLCRMG*LQKPHL
Trigger: AAGATGTGGCTTCTGCAACCAGCCCATCCGACACAA...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCATTGCTAGATGGGAACTaGGACATGATTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPLLDGN*DMISSV
Trigger: CACAGATGAAATCATGTCTCAGTTCCCATCTAGCAA...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR GCA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGGAGTTCTTGTCTGTGTaGAATCCACTTTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGEFLSV*NPLCGR
Trigger: ACGCCCACAAAGTGGATTGCACACAGACAAGAACTC...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR TCA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTTGCTAGATGGGAACTaGGACATGATTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLLLDGN*DMISSV
Trigger: CACAGATGAAATCATGTCTCAGTTCCCATCTAGCAA...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS-3UTR TCA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTTTGCTAGATGGGAACTaGGACATGATTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCLLDGN*DMISSV
Trigger: CACAGATGAAATCATGTCTCAGTTCCCATCTAGCAA...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000567607.5
CDS TCA 90 bp GGGGCGGGACCCATGCGGTGGAGGCCCGTCCCACAGCTCTCCTGGTaGGATAGGGCGGGCTCGGTGCGGCCGGGCGGGGCTCACGTGTCG +
Preference number: 5 (lower is better)
Translates to: GAGPMRWRPVPQLSW*DRAGSVRPGGAHVS
Trigger: CGACACGTGAGCCCCGCCCGGCCGCACCGAGCCCGCCCTATCTCACCAGGAGAGCTGTGGGACGGGCCTCCACCGCATGGGTCCCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000569703.5
CDS GCA 90 bp CCTCCCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCCGTCACCACCTGCGAGTGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PPRAVEQPPQTKCSG*QARPRAVTTCEWEV
Trigger: CACCTCCCACTCGCAGGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS GCA 90 bp GGAGGCCCGTCCCACAGCTCTCCTGGTGAGATAGGGCGGGCTCGGTaGGGCCGGGCGGGGCTCACGTGTCGGATGGGCTGGTTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GGPSHSSPGEIGRAR*GRAGLTCRMGWLQK
Trigger: CTTCTGCAACCAGCCCATCCGACACGTGAGCCCCGCCCGGCCGCACCGAGCCCGCCCTATCTCACCAGGAGAGCTGTGGGACGGGCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000569703.5
CDS-3UTR CAA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCC +
Preference number: 5 (lower is better)
Translates to: VGGASRSESKASGSGGPGEPQRP*AWVGTP
Trigger: GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTC...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS CCA 90 bp TGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACCTGCGAGTaGGAGGTGAGGCGGGTCAGAGCGGCTCTGACAACCACATGCCCA +
Preference number: 5 (lower is better)
Translates to: CSGCQARPRAVTTCE*EVRRVRAALTTTCP
Trigger: TGGGCATGTGGTTGTCAGAGCCGCTCTGACCCGCCTCACCTCCCACTCGCAGGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS-3UTR CAA 90 bp CAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCC +
Preference number: 5 (lower is better)
Translates to: QWVGPPALRARPRGLEDPEPQRP*AWVGTP
Trigger: GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTC...CGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCGCGTCGTGCGTGGAAGTTCCTGGAAGGACCCCTaGGTGAGCGGGCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RSQGGHTWRTASRVVRGSSWKDP*VSGRRQ
Trigger: CTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGA...ACTTCCACGCACGACGCGGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp CCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGATCCGCAGGGCGCTCTTaGGGAGCCCCTGACCTTGGC +
Preference number: 5 (lower is better)
Translates to: PPALRARPRGLEDPAFPGSAGRS*GAPDLG
Trigger: GCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGGA...TCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGCCGACACGCAGCGGCCGGTCACAGGGAGGCCACACGTGGCGCACAGCGAGCCTTTGGGGACCGAGGCTaGCATACCGTGCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: GRHAAAGHREATRGAQRAFGDRG*HTVLYR
Trigger: CCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAAA...GGCTCGCTGTGCGCCACGTGTGGCCTCCCTGTGACCGGCCGCTGCGTGTCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGAGGGCGCAGGTGGCAGAAGCCTTaGGGAGGCCAGGAGACGGGC +
Preference number: 5 (lower is better)
Translates to: ALRARPRGLEDPAFPGGRRWQKP*GGQETG
Trigger: GCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACCT...GCGCCCTCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACAGGTGGCAGAAGCCTTaGGGAGGCCAGGAGACGGGC +
Preference number: 5 (lower is better)
Translates to: LQWVGPPALRARPRGLEDRWQKP*GGQETG
Trigger: GCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACCT...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGGCGAACAGCTGCAGGAAGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTATGGGGAGCCCTCATTaGTGGAGCTCACCACCGGTG +
Preference number: 5 (lower is better)
Translates to: GRTAAGSPGGSRGGPRARMGSPH*WSSPPV
Trigger: CACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCAT...ACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACTTCCTGCAGCTGTTCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACGTGTCTAGGCTGCCCTaGCCAGTCGGCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LQWVGPPALRARPRGLEDVSRLP*PVGSGG
Trigger: CCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACAC...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp AGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTGGAAACCCTCATCTCCGAGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCC +
Preference number: 5 (lower is better)
Translates to: SPGGSRGGPRARGNPHLREPQRP*AWVGTP
Trigger: GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTC...TCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS CCA 90 bp AGGGGCGGCCCTCGCGCTCGTGGAAACCTAGGAGAGGGAACCGAGTaGGCTGAAAGCAAAGGGTGCGGGCGGGACGGGGGACCCACAAGA +
Preference number: 5 (lower is better)
Translates to: RGGPRARGNLGEGTE*AESKGCGRDGGPTR
Trigger: TCTTGTGGGTCCCCCGTCCCGCCCGCACCCTTTGCTTTCAGCCCACTCGGTTCCCTCTCCTAGGTTTCCACGAGCGCGAGGGCCGCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS-3UTR CAA 90 bp CCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCATGGGGAGCCCTCATTaGTGGAGCTCACCACCGGTG +
Preference number: 5 (lower is better)
Translates to: PVGGASRSESKASGSGGPMGSPH*WSSPPV
Trigger: CACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCAT...GGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCC +
Preference number: 5 (lower is better)
Translates to: GRAERAVSRRASGSRAGSEPQRP*AWVGTP
Trigger: GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTC...ACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp AGCCGCGTCGTGCGTGGAAGTGGTTCTCGCACAACGGGCGGCCCTCGTGCTCGAGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCC +
Preference number: 5 (lower is better)
Translates to: SRVVRGSGSRTTGGPRAREPQRP*AWVGTP
Trigger: GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTC...TCGAGCACGAGGGCCGCCCGTTGTGCGAGAACCACTTCCACGCACGACGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTGAGCGCCTCCTGGAAGGACCCCTaGGTGAGCGGGCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: AKHSLQTKQSGCQSALSASWKDP*VSGRRQ
Trigger: CTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGA...GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS GCA 90 bp GGGCTCGGTGCGGCCGGGCGGGGCTCACGTGTCGGATGGGCTGGTTaGAGAAGCCACATCTTGGCGAGAAGCGCTCAAAGTAGCACTCGG +
Preference number: 5 (lower is better)
Translates to: GLGAAGRGSRVGWAG*RSHILARSAQSSTR
Trigger: CCGAGTGCTACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCAACCAGCCCATCCGACACGTGAGCCCCGCCCGGCCGCACCGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000569703.5
CDS-3UTR CAA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTCCGCAGGGCGCTCTTaGGGAGCCCCTGACCTTGGC +
Preference number: 5 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQSAGRS*GAPDLG
Trigger: GCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGGA...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCTGTACAGGTGGTCCTaGTCCCCCGAGGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: LQWVGPPALRARPRGLEDLYRWS*SPEAPE
Trigger: TTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAG...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp TGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATGGTGCTGTACAGGTGGTCCTaGTCCCCCGAGGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: WVGTPRRLRSDCSSPSMVLYRWS*SPEAPE
Trigger: TTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAG...CACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGAGGGCGCCTGTACAGGTGGTCCTaGTCCCCCGAGGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: ALRARPRGLEDPAFPGGRLYRWS*SPEAPE
Trigger: TTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAG...GCGCCCTCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CCAGGGCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTGCCAGGCGCGGCTTTGGGGACCGAGGCTaGCATACCGTGCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: PGRWNSLRKRSARGARRGFGDRG*HTVLYR
Trigger: CCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAAA...GCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATAAGGCGGTCACCATCTaGTGTCGGATGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GLGGNTPAAEVGLQQPQHKAVTI*CRMGWL
Trigger: CAACCAGCCCATCCGACACAAGATGGTGACCGCCTT...ATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp CCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCTCCGATTCGCTGGAATaGCAAGGACCCTCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: PVGGASRSESKASGSGGPSDSLE*QGPSPS
Trigger: ACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGA...GGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS CCA 90 bp AGGAGGCGCGGGCAGAGGCGAAAAGCAGAAGTAAGAAGACAGGGATaGGGAGATGCGGGAGAGCGACGGCGGGGAGGCAGCTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RRRGQRRKAEVRRQG*GDAGERRRGGSSGQ
Trigger: CTGCCCAGAGCTGCCTCCCCGCCGTCGCTCTCCCGCATCTCCCCATCCCTGTCTTCTTACTTCTGCTTTTCGCCTCTGCCCGCGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS-3UTR CAA 90 bp GAGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCATGGGGAGCCCTCATTaGTGGAGCTCACCACCGGTG +
Preference number: 5 (lower is better)
Translates to: ERAQAEGACEVVRVEAATMGSPH*WSSPPV
Trigger: CACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCAT...GGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCTTTTCCGGGAGGGCGCAAGGCGGTCACCATCTaGTGTCGGATGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: ALRARPRGLEDPAFPGGRKAVTI*CRMGWL
Trigger: CAACCAGCCCATCCGACACAAGATGGTGACCGCCTT...GCGCCCTCCCGGAAAAGCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGTCCTGGAAGGACCCCTaGGTGAGCGGGCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RPGLASDSLELQGPSPSKSWKDP*VSGRRQ
Trigger: CTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGA...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS CCA 90 bp CGCACAGCCTTCCAGCCCCAGGCTTCGCAGGGAGGACGAGATACCTaGGTCCCCCTTCCGGACAAGACACCTCTCTCCATCCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: RTAFQPQASQGGRDT*VPLPDKTPLSIPAS
Trigger: GGATGCAGGGATGGAGAGAGGTGTCTTGTCCGGAAGGGGGACCCAGGTATCTCGTCCTCCCTGCGAAGCCTGGGGCTGGAAGGCTGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CCA 90 bp CCCAGGCCCCTGAGTCCCGCCCTGGGCTCCTCACTGGCGCTTCGCTaGGACCTGCCTTCTGATTGGCTGTTTATCTGCGGTACAGCGTCA +
Preference number: 5 (lower is better)
Translates to: PRPLSPALGSSLALR*DLPSDWLFICGTAS
Trigger: TGACGCTGTACCGCAGATAAACAGCCAATCAGAAGGCAGGTCCCAGCGAAGCGCCAGTGAGGAGCCCAGGGCGGGACTCAGGGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS-3UTR CAA 90 bp GCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTAGGGCTCTGTACAGGTGGTCCTaGTCCCCCGAGGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: AERAVSRRASGSRAGSRALYRWS*SPEAPE
Trigger: TTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAG...AGCCCTACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp CCAGCATGGTGTCTAGGCTGCCCTTGCCAGTCGGCTCTGGTGGGGATGGGGAGCATGGGGAGCCCTCATTaGTGGAGCTCACCACCGGTG +
Preference number: 5 (lower is better)
Translates to: PAWCLGCPCQSALVGMGSMGSPH*WSSPPV
Trigger: CACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCAT...GCTCCCCATCCCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACACCATGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTGTGTCTAGGCTGCCCTaGCCAGTCGGCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: GSKDVLAWPPIRWNCKDPVSRLP*PVGSGG
Trigger: CCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACAC...AGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTGTCTAGGCTGCCCTaGCCAGTCGGCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPVSRLP*PVGSGG
Trigger: CCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACAC...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGTGCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGTGTCTAGGCTGCCCTaGCCAGTCGGCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: GAGSKDVLAWPPIRWNCKVSRLP*PVGSGG
Trigger: CCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACAC...CTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGGGCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTCTAGGCTGCCCTaGCCAGTCGGCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: GAPSRVGIEWRPAREFLSVSRLP*PVGSGG
Trigger: CCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACAC...AGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGGGCTCCCTCAAGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCC +
Preference number: 5 (lower is better)
Translates to: GAPSRVGIEWRPAREFLSEPQRP*AWVGTP
Trigger: GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTC...AGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCTTGAGGGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCGGCCAGAGCCGTCACCACTaGCCCAGCAATAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: VGGASRSESKASGSGGPGQSRHH*PSNRFI
Trigger: AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTG...GCCGGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGTCCTGGAAGGACCCCTaGGTGAGCGGGCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVSWKDP*VSGRRQ
Trigger: CTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGA...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGG +
Preference number: 5 (lower is better)
Translates to: PVGGASRSESKASGSGGPCVQST*WACGFR
Trigger: CCTAAACCCACACGCCCACAAAGTGGATTGCACACA...GGGTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGCCCGCACGGGAGTTCTaGTCTGTGTGCAATCCACTT +
Preference number: 5 (lower is better)
Translates to: ALQWVGPPALRARPRGLEPAREF*SVCNPL
Trigger: AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGG...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGACCCCGCACGGGAGTTCTaGTCTGTGTGCAATCCACTT +
Preference number: 5 (lower is better)
Translates to: LQWVGPPALRARPRGLEDPAREF*SVCNPL
Trigger: AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGG...GTCCTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS CCA 90 bp CCTGAAGACTCCCCAGACCCTGTCTACAGAGCGGAGACGCACAGGTaGGATGACAGGCCTGCACTCTGCCCCACTGAGGCTGAGATCCCC +
Preference number: 5 (lower is better)
Translates to: PEDSPDPVYRAETHR*DDRPALCPTEAEIP
Trigger: GGGGATCTCAGCCTCAGTGGGGCAGAGTGCAGGCCTGTCATCCCACCTGTGCGTCTCCGCTCTGTAGACAGGGTCTGGGGAGTCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567524.1
ENST00000569254.5
CDS-3UTR CAA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTCCGCAGGGCGCTCTTaGGGAGCCCCTGACCTTGGC +
Preference number: 5 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVSAGRS*GAPDLG
Trigger: GCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGGA...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAAAGGTGGCAGAAGCCTTaGGGAGGCCAGGAGACGGGC +
Preference number: 5 (lower is better)
Translates to: RSWKPSSPKGSPQLTQQKRWQKP*GGQETG
Trigger: GCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACCT...TTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GCTCTCCAGTGGGTGGGGCCTCCCGCTCTGAGAGCAAGGCCTCGGGGTCTGGAGGGCTGGAAGATGGTTTaGAACGCGGAAGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: ALQWVGPPALRARPRGLEGWKMV*NAEVRE
Trigger: CTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCC...CTCCAGACCCCGAGGCCTTGCTCTCAGAGCGGGAGGCCCCACCCACTGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAAGTGTCTAGGCTGCCCTaGCCAGTCGGCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: RSWKPSSPKGSPQLTQQKVSRLP*PVGSGG
Trigger: CCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACAC...TTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp AGTCCCGGCGGCAGTAGGGGCGGCCCTCGCGCTCGTGGAAACCCTCATCTCCGACCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SPGGSRGGPRARGNPHLRPAIGL*QEPQRP
Trigger: AGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG...TCGGAGATGAGGGTTTCCACGAGCGCGAGGGCCGCCCCTACTGCCGCCGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGCAGCCCCAGCATGGTGTCTGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: GGNTPAAEVGLQQPQHGVCRSHI*ARSAQS
Trigger: ACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCA...GACACCATGCTGGGGCTGCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGAGCGCGCTGAGCGCCAAGGCGGTCACCATCTaGTGTCGGATGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AKHSLQTKQSGCQSALSAKAVTI*CRMGWL
Trigger: CAACCAGCCCATCCGACACAAGATGGTGACCGCCTT...GGCGCTCAGCGCGCTCTGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp CAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCACCCGCACGGGAGTTCTaGTCTGTGTGCAATCCACTT +
Preference number: 5 (lower is better)
Translates to: QTKCSGCQARPRAVTTCPPAREF*SVCNPL
Trigger: AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGG...TGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR CAA 90 bp CCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGCTGTACAGGTGGTCCTaGTCCCCCGAGGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: PIRWNCKDPPPVRGLPQGLYRWS*SPEAPE
Trigger: TTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAG...CCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCACTGTACAGGTGGTCCTaGTCCCCCGAGGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPLYRWS*SPEAPE
Trigger: TTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAG...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCTTTGGGGACCGAGGCTaGCATACCGTGCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: AWPPIRWNCKDPPPVRGLFGDRG*HTVLYR
Trigger: CCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAAA...GAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTAGGTGGCAGAAGCCTTaGGGAGGCCAGGAGACGGGC +
Preference number: 5 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVRWQKP*GGQETG
Trigger: GCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACCT...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAATGCTCTGGAGGTGGCAGAAGCCTTaGGGAGGCCAGGAGACGGGC +
Preference number: 5 (lower is better)
Translates to: ETLISEGLPATDAAEMLWRWQKP*GGQETG
Trigger: GCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACCT...CCAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp TCCGGGGGAGAGGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGCTGGAAGATGGTTTaGAACGCGGAAGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SGGEGEPSGLSAEELQEAGWKMV*NAEVRE
Trigger: CTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCC...TGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCCTCTCCCCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS-3UTR CAA 90 bp CAAACGAAGTGCTCGGGGTGCCAGGCGCGGCCCAGAGCCGTCACCACTTGCCCACCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: QTKCSGCQARPRAVTTCPPAIGL*QEPQRP
Trigger: AGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG...TGGGCAAGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp AGCGGGCGCAGGCAGAAGGTGCATGTGAAGTGGTCCGGGTGGAAGCGGCGACCCTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGG +
Preference number: 5 (lower is better)
Translates to: SGRRQKVHVKWSGWKRRPCVQST*WACGFR
Trigger: CCTAAACCCACACGCCCACAAAGTGGATTGCACACA...GGGTCGCCGCTTCCACCCGGACCACTTCACATGCACCTTCTGCCTGCGCCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564804.1
CDS TCA 90 bp CTTGCATACCGTGCTGTACAGGTGGTCCTTGTCCCCCGAGGCTCCTaGAGACTCCCCAGACCCTGTCTACAGAGCGGAGACGCACAGGTG +
Preference number: 5 (lower is better)
Translates to: LAYRAVQVVLVPRGS*RLPRPCLQSGDAQV
Trigger: CACCTGTGCGTCTCCGCTCTGTAGACAGGGTCTGGGGAGTCTTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAGCACGGTATGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569254.5
CDS CCA 90 bp TTGCATACCGTGCTGGGAAGCAGAGTGGGAGCCTGGGTTCAGGGGTaGGGAATCCAAGCCTCCTCACCTGAGACTCAGTTGGCCCCCATG +
Preference number: 5 (lower is better)
Translates to: LHTVLGSRVGAWVQG*GIQASSPETQLAPM
Trigger: CATGGGGGCCAACTGAGTCTCAGGTGAGGAGGCTTGGATTCCCCACCCCTGAACCCAGGCTCCCACTCTGCTTCCCAGCACGGTATGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000561785.5
ENST00000564176.5
ENST00000567524.1
CDS CCA 90 bp GTGCCTGGCCCTCAGCTTTCTGATTGGACGCTCTCTCTTCCATGCTaGTTAACTCCTCCCTCTACCTACACAGGCCCCGCCCAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: VPGPQLSDWTLSLPC*LTPPSTYTGPAQPG
Trigger: GCCAGGCTGGGCGGGGCCTGTGTAGGTAGAGGGAGGAGTTAACCAGCATGGAAGAGAGAGCGTCCAATCAGAAAGCTGAGGGCCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CCA 90 bp CTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAATGCTCTaGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LISEGLPATDAAEML*VPVSAQGGHHLLQG
Trigger: TCCCTGCAGAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS-3UTR CAA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTCCGCAGGGCGCTCTTaGGGAGCCCCTGACCTTGGC +
Preference number: 5 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLSAGRS*GAPDLG
Trigger: GCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGGA...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACTTTGGGGACCGAGGCTaGCATACCGTGCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDFGDRG*HTVLYR
Trigger: CCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAAA...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp AGGGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCAGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCC +
Preference number: 5 (lower is better)
Translates to: RVGIEWRPAREFLSVCNPEPQRP*AWVGTP
Trigger: GGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTC...TGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGGCGAGCCGAGCGGGCTGTCAGCCGAAGAGCTTCAGGAAGCAGGGCTGGCAGTCAGAGCCGTCACCACTaGCCCAGCAATAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: GRAERAVSRRASGSRAGSQSRHH*PSNRFI
Trigger: AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTG...ACTGCCAGCCCTGCTTCCTGAAGCTCTTCGGCTGACAGCCCGCTCGGCTCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTCCTGGAAGGACCCCTaGGTGAGCGGGCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLSWKDP*VSGRRQ
Trigger: CTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGA...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCATCCGATTCGCTGGAATaGCAAGGACCCTCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPSDSLE*QGPSPS
Trigger: ACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGA...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCTCCGATTCGCTGGAATaGCAAGGACCCTCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: GARTSWPGLRFAGIARTLSDSLE*QGPSPS
Trigger: ACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGA...GAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS GCA 90 bp TCACTGGCGCTTCGCTGGGACCTGCCTTCTGATTGGCTGTTTATCTaGGGTACAGCGTCAGTTACCCCTACCGAGCAGCGCCCTCTACCG +
Preference number: 5 (lower is better)
Translates to: SLALRWDLPSDWLFI*GTASVTPTEQRPLP
Trigger: CGGTAGAGGGCGCTGCTCGGTAGGGGTAACTGACGCTGTACCGCAGATAAACAGCCAATCAGAAGGCAGGTCCCAGCGAAGCGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS GCA 90 bp CCAGTGCCTGGCCCTCAGCTTTCTGATTGGACGCTCTCTCTTCCATaGTGGTTAACTCCTCCCTCTACCTACACAGGCCCCGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PVPGPQLSDWTLSLP*WLTPPSTYTGPAQP
Trigger: AGGCTGGGCGGGGCCTGTGTAGGTAGAGGGAGGAGTTAACCAGCATGGAAGAGAGAGCGTCCAATCAGAAAGCTGAGGGCCAGGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS-3UTR CAA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGAGGTGGCAGAAGCCTTaGGGAGGCCAGGAGACGGGC +
Preference number: 5 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGRWQKP*GGQETG
Trigger: GCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACCT...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGAGGTGGCAGAAGCCTTaGGGAGGCCAGGAGACGGGC +
Preference number: 5 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLRWQKP*GGQETG
Trigger: GCCCGTCTCCTGGCCTCCCAAAGGCTTCTGCCACCT...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACAGTCCGGGTGCCAGGCTGGAAGATGGTTTaGAACGCGGAAGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: ASREGREAFPADETVRVPGWKMV*NAEVRE
Trigger: CTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCC...TGGCACCCGGACTGTTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp GCTCACCACCGGTGGCTGAGTTGGCCCAGAGGCTGGAAGATGGTTTTGAACGCGAAGGCGGTCACCATCTaGTGTCGGATGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AHHRWLSWPRGWKMVLNAKAVTI*CRMGWL
Trigger: CAACCAGCCCATCCGACACAAGATGGTGACCGCCTT...CGCGTTCAAAACCATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp CGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGTCCTGGAAGGACCCCTaGGTGAGCGGGCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: REFLSVCNPLCGRVGLGLSWKDP*VSGRRQ
Trigger: CTGCCTGCGCCCGCTCACCAAGGGGTCCTTCCAGGA...CAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp AGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGG +
Preference number: 5 (lower is better)
Translates to: RTSWPGLRFAGIARTLPQCVQST*WACGFR
Trigger: CCTAAACCCACACGCCCACAAAGTGGATTGCACACA...CTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGCCCGCACGGGAGTTCTaGTCTGTGTGCAATCCACTT +
Preference number: 5 (lower is better)
Translates to: RPGLASDSLELQGPSPSKPAREF*SVCNPL
Trigger: AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGG...CTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS GCA 90 bp TGCGAGTGGGAGGTGAGGCGGGTCAGAGCGGCTCTGACAACCACATaGCCAGTGAGGCAAGATTTACGCGGCGTTTTTCGAGTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: CEWEVRRVRAALTTT*PVRQDLRGVFRVLS
Trigger: AGAGAGGACTCGAAAAACGCCGCGTAAATCTTGCCTCACTGGGCATGTGGTTGTCAGAGCCGCTCTGACCCGCCTCACCTCCCACTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS-3UTR CAA 90 bp CCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCTGTACAGGTGGTCCTaGTCCCCCGAGGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: PLCGRVGLGLAGPFLNLTLYRWS*SPEAPE
Trigger: TTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAG...GGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTTTGGGGACCGAGGCTaGCATACCGTGCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: GPHGSSCLCAIHFVGVWVFGDRG*HTVLYR
Trigger: CCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAAA...AACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp AAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCCTCCCCCATGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: KDVLAWPPIRWNCKDPPPCRSHI*ARSAQS
Trigger: ACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCA...TGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACTGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGG +
Preference number: 5 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDCVQST*WACGFR
Trigger: CCTAAACCCACACGCCCACAAAGTGGATTGCACACA...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS TCA 90 bp AAGTCCTGCCCTCAGTCTTCGTCTCTGAGCACCCGCGTGAAACCCTaGAGCCTTCGCGGGCGCCTAGGCACTCCTGAGTTACTATTCTCT +
Preference number: 5 (lower is better)
Translates to: KSCPQSSSLSTRVKP*SLRGRLGTPELLFS
Trigger: AGAGAATAGTAACTCAGGAGTGCCTAGGCGCCCGCGAAGGCTTCAGGGTTTCACGCGGGTGCTCAGAGACGAAGACTGAGGGCAGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS-3UTR CAA 90 bp AGGCTGGAAGATGGTTTTGAACGCGGAAGTCAGAGAGTGAGGCCATCAGTCTATTCCGCAGGGCGCTCTTaGGGAGCCCCTGACCTTGGC +
Preference number: 5 (lower is better)
Translates to: RLEDGFERGSQRVRPSVYSAGRS*GAPDLG
Trigger: GCCAAGGTCAGGGGCTCCCAAAGAGCGCCCTGCGGA...ATAGACTGATGGCCTCACTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563712.6
CDS-3UTR CAA 90 bp GATTCGCTGGAATTGCAAGGACCCTCCCCCAGTAAGGGGGCTCCCTCAAGGGTGGGCTGGAAGATGGTTTaGAACGCGGAAGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: DSLELQGPSPSKGAPSRVGWKMV*NAEVRE
Trigger: CTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCC...CACCCTTGAGGGAGCCCCCTTACTGGGGGAGGGTCCTTGCAATTCCAGCGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GCAGGGAGCAAGGACGTCCTGGCCTGGCCTCCGATTCGCTGGAATTGCAAGGACCAGAGCCGTCACCACTaGCCCAGCAATAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: AGSKDVLAWPPIRWNCKDQSRHH*PSNRFI
Trigger: AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTG...GTCCTTGCAATTCCAGCGAATCGGAGGCCAGGCCAGGACGTCCTTGCTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CGCTCGTGGAAACCCTCATCTCCGAAGGGCTCCCCGCAACTGACGCAGCAGAAATGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: RSWKPSSPKGSPQLTQQKCRSHI*ARSAQS
Trigger: ACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCA...TTTCTGCTGCGTCAGTTGCGGGGAGCCCTTCGGAGATGAGGGTTTCCACGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCAAAGGCGGTCACCATCTaGTGTCGGATGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSKAVTI*CRMGWL
Trigger: CAACCAGCCCATCCGACACAAGATGGTGACCGCCTT...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GCAGCAGAAATGCTCTGGGTGCCAGTGAGTGCCCAAGGCGGTCACCATCTTGTGGGCTGGAAGATGGTTTaGAACGCGGAAGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: AAEMLWVPVSAQGGHHLVGWKMV*NAEVRE
Trigger: CTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCC...CACAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGATGGGGAGCCCTCATTaGTGGAGCTCACCACCGGTG +
Preference number: 5 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGMGSPH*WSSPPV
Trigger: CACCGGTGGTGAGCTCCACAAATGAGGGCTCCCCAT...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CTCATTTGTGGAGCTCACCACCGGTGGCTGAGTTGGCCCAGAGGCTGGAAGATGTGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: LICGAHHRWLSWPRGWKMCRSHI*ARSAQS
Trigger: ACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCA...CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAGCTCCACAAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGAAGGCGGTCACCATCTaGTGTCGGATGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGKAVTI*CRMGWL
Trigger: CAACCAGCCCATCCGACACAAGATGGTGACCGCCTT...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTCCCGCACGGGAGTTCTaGTCTGTGTGCAATCCACTT +
Preference number: 5 (lower is better)
Translates to: GGNRVEARTGVLVCVQSTPAREF*SVCNPL
Trigger: AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGG...AGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GTGGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTGAGAGCAGGGCATGCTaGGAGCCAAGCACAAACCCA +
Preference number: 5 (lower is better)
Translates to: VGIEWRPAREFLSVCNPLESRAC*EPSTNP
Trigger: TGGGTTTGTGCTTGGCTCCAAGCATGCCCTGCTCTC...AAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394858.6
CDS TCA 90 bp CCCTCCAAATTGCTCCATTGGCCCAGTGCCTGGCCCTCAGCTTTCTaGTTGGACGCTCTCTCTTCCATGCTGGTTAACTCCTCCCTCTAC +
Preference number: 5 (lower is better)
Translates to: PSKLLHWPSAWPSAF*LDALSSMLVNSSLY
Trigger: GTAGAGGGAGGAGTTAACCAGCATGGAAGAGAGAGCGTCCAATCAGAAAGCTGAGGGCCAGGCACTGGGCCAATGGAGCAATTTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS GCA 90 bp CCCAAGCCAAATTTGGCTCCCCTCCAAATTGCTCCATTGGCCCAGTaGCTGGCCCTCAGCTTTCTGATTGGACGCTCTCTCTTCCATGCT +
Preference number: 5 (lower is better)
Translates to: PKPNLAPLQIAPLAQ*LALSFLIGRSLFHA
Trigger: AGCATGGAAGAGAGAGCGTCCAATCAGAAAGCTGAGGGCCAGGCACTGGGCCAATGGAGCAATTTGGAGGGGAGCCAAATTTGGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS-3UTR CAA 90 bp GCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTTTTGGGGACCGAGGCTaGCATACCGTGCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: AREFLSVCNPLCGRVGLGFGDRG*HTVLYR
Trigger: CCTGTACAGCACGGTATGCAAGCCTCGGTCCCCAAA...ACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp CTTTTCTTATCTTCAGACTGGTCCTCCTTCTGCTCTCCTGAAGCCACCTTGCTAGTGTCTAGGCTGCCCTaGCCAGTCGGCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LFLSSDWSSFCSPEATLLVSRLP*PVGSGG
Trigger: CCCACCAGAGCCGACTGGCAAGGGCAGCCTAGACAC...TAGCAAGGTGGCTTCAGGAGAGCAGAAGGAGGACCAGTCTGAAGATAAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563712.6
ENST00000567066.6
CDS-3UTR CAA 90 bp CCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PLCGRVGLGLAGPFLNLTPAIGL*QEPQRP
Trigger: AGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG...GGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp TGCTCGAAAAAGCTGCCTCCCGAGAAGGGCGCGAAGCATTCCCTGCAGACGAAACCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: CSKKLPPEKGAKHSLQTKPAIGL*QEPQRP
Trigger: AGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG...TTTCGTCTGCAGGGAATGCTTCGCGCCCTTCTCGGGAGGCAGCTTTTTCGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp CTCATTTGTGGAGCTCACCACCGGTGGCTGAGTTGGCCCAGAGGCTGGAAGATGCAGAGCCGTCACCACTaGCCCAGCAATAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: LICGAHHRWLSWPRGWKMQSRHH*PSNRFI
Trigger: AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTG...CATCTTCCAGCCTCTGGGCCAACTCAGCCACCGGTGGTGAGCTCCACAAATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563712.6
ENST00000564804.1
ENST00000567066.6
CDS-3UTR CAA 90 bp CGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACTTGACCCCTGAGGACTCATGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: RVGLGLAGPFLNLTPEDSCRSHI*ARSAQS
Trigger: ACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCA...TGAGTCCTCAGGGGTCAAGTTCAGAAACGGCCCAGCCAGACCTAAACCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGAAGGCGGTCACCATCTaGTGTCGGATGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: VLVCVQSTLWACGFRSGWKAVTI*CRMGWL
Trigger: CAACCAGCCCATCCGACACAAGATGGTGACCGCCTT...CCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGTCCGATTCGCTGGAATaGCAAGGACCCTCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: VLVCVQSTLWACGFRSGWSDSLE*QGPSPS
Trigger: ACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGA...CCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTTCCGATTCGCTGGAATaGCAAGGACCCTCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: AREFLSVCNPLCGRVGLGSDSLE*QGPSPS
Trigger: ACTGGGGGAGGGTCCTTGCAATTCCAGCGAATCGGA...ACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS TCA 90 bp ACAAGACACCTCTCTCCATCCCTGCATCCCCAGATCCGGGTCTTTTaGGCCCTTTCACTTCCAGAACCCAGAAGTCCTGCCCTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: TRHLSPSLHPQIRVF*ALSLPEPRSPALSL
Trigger: AAGACTGAGGGCAGGACTTCTGGGTTCTGGAAGTGAAAGGGCTCAAAAGACCCGGATCTGGGGATGCAGGGATGGAGAGAGGTGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS GCA 90 bp CAAAATGGGCTCTTCACCCAAGCCAAATTTGGCTCCCCTCCAAATTaGTCCATTGGCCCAGTGCCTGGCCCTCAGCTTTCTGATTGGACG +
Preference number: 5 (lower is better)
Translates to: QNGLFTQAKFGSPPN*SIGPVPGPQLSDWT
Trigger: CGTCCAATCAGAAAGCTGAGGGCCAGGCACTGGGCCAATGGAGCAATTTGGAGGGGAGCCAAATTTGGCTTGGGTGAAGAGCCCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS GCA 90 bp TCTGTGACAGGTCTCTGCCTCCCTTCTCACAAGGCTCCACTTACTTaGCCAGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SVTGLCLPSHKAPLT*PAIGLLQEPQRPLA
Trigger: GGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAAGTAAGTGGAGCCTTGTGAGAAGGGAGGCAGAGACCTGTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CCA 90 bp CCAAATTGCTCCATTGGCCCAGTGCCTGGCCCTCAGCTTTCTGATTaGACGCTCTCTCTTCCATGCTGGTTAACTCCTCCCTCTACCTAC +
Preference number: 5 (lower is better)
Translates to: PNCSIGPVPGPQLSD*TLSLPCWLTPPSTY
Trigger: GTAGGTAGAGGGAGGAGTTAACCAGCATGGAAGAGAGAGCGTCCAATCAGAAAGCTGAGGGCCAGGCACTGGGCCAATGGAGCAATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS-3UTR CAA 90 bp GGGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGGGCTGGAAGATGGTTTaGAACGCGGAAGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GNRVEARTGVLVCVQSTLGWKMV*NAEVRE
Trigger: CTCTCTGACTTCCGCGTTCAAAACCATCTTCCAGCC...CAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp ATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: IEWRPAREFLSVCNPLCGPAIGL*QEPQRP
Trigger: AGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG...CCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAATGTGTGCAATCCACTTaGTGGGCGTGTGGGTTTAGG +
Preference number: 5 (lower is better)
Translates to: VQSTLWACGFRSGWAVSECVQST*WACGFR
Trigger: CCTAAACCCACACGCCCACAAAGTGGATTGCACACA...TTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS CCA 90 bp TCTTCTCTGATGCAGTCAAAATGGGCTCTTCACCCAAGCCAAATTTaGCTCCCCTCCAAATTGCTCCATTGGCCCAGTGCCTGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: SSLMQSKWALHPSQI*LPSKLLHWPSAWPS
Trigger: TGAGGGCCAGGCACTGGGCCAATGGAGCAATTTGGAGGGGAGCCAAATTTGGCTTGGGTGAAGAGCCCATTTTGACTGCATCAGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS CCA 90 bp CAGAATAAAGAATCCAGTGTTCGAGATCACGCAGCCTGTAAGCGATaGAGATCTAGCTCCCGTGTTCCGTCTTCCAGCTGCGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: QNKESSVRDHAACKR*RSSSRVPSSSCAPG
Trigger: TCCTGGAGCGCAGCTGGAAGACGGAACACGGGAGCTAGATCTCCATCGCTTACAGGCTGCGTGATCTCGAACACTGGATTCTTTATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS-3UTR CAA 90 bp GCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: AREFLSVCNPLCGRVGLGPAIGL*QEPQRP
Trigger: AGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG...ACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAACTCCCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GTTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGCCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: VLVCVQSTLWACGFRSGWPAIGL*QEPQRP
Trigger: AGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGG...CCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGCCGTTTCTGAACAGAGCCGTCACCACTaGCCCAGCAATAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: VQSTLWACGFRSGWAVSEQSRHH*PSNRFI
Trigger: AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTG...TTCAGAAACGGCCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp TTCTTGTCTGTGTGCAATCCACTTTGTGGGCGTGTGGGTTTAGGTCTGGCTGGGTGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: FLSVCNPLCGRVGLGLAGCRSHI*ARSAQS
Trigger: ACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCA...CCCAGCCAGACCTAAACCCACACGCCCACAAAGTGGATTGCACACAGACAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS-3UTR CAA 90 bp GGAATAGAGTGGAGGCCCGCACGGGAGTTCTTGTCTGTGTGCAATCCACTTTGTCAGAGCCGTCACCACTaGCCCAGCAATAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: GIEWRPAREFLSVCNPLCQSRHH*PSNRFI
Trigger: AATAAACCTATTGCTGGGCAAGTGGTGACGGCTCTG...ACAAAGTGGATTGCACACAGACAAGAACTCCCGTGCGGGCCTCCACTCTATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000564804.1
ENST00000567607.5
CDS TCA 90 bp CAGAGCCAGGCAGAGCACTGCTCGAAGGGTAGCAAGGAATATTTATaGCCAGAATATCCCAGTTGCTCACGCTTGGAGCCAAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: QSQAEHCSKGSKEYL*PEYPSCSRLEPSTN
Trigger: GTTTGTGCTTGGCTCCAAGCGTGAGCAACTGGGATATTCTGGTCATAAATATTCCTTGCTACCCTTCGAGCAGTGCTCTGCCTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS TCA 90 bp AAAAGGGAACAGCATAAAGCCCAGCTCTCACTAAAGATGGGTCTGTaGCAGGTCTCTGCCTCCCTTCTCACAAGGCTCCACTTACTTGCC +
Preference number: 5 (lower is better)
Translates to: KREQHKAQLSLKMGL*QVSASLLTRLHLLA
Trigger: GGCAAGTAAGTGGAGCCTTGTGAGAAGGGAGGCAGAGACCTGTCACAGACCCATCTTTAGTGAGAGCTGGGCTTTATGCTGTTCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CCA 90 bp AGGGTCACGGTTAGATCAGAAGATAAGGTTCCCAGTGGGCAGTACTaGAGAAGGACAGAAGCCAGTATTAAGAGAAGAGGTCACAGGGCC +
Preference number: 5 (lower is better)
Translates to: RVTVRSEDKVPSGQY*RRTEASIKRRGHRA
Trigger: GGCCCTGTGACCTCTTCTCTTAATACTGGCTTCTGTCCTTCTCCAGTACTGCCCACTGGGAACCTTATCTTCTGATCTAACCGTGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS TCA 90 bp CCAGTCCAGACTCTGACGGAGGAAGAGAGAGCCTTTGTAGATGCCTaGGAGATATTGGGTGGAGCCACAGAGTGTTTTGTGAAGATCAGA +
Preference number: 5 (lower is better)
Translates to: PVQTLTEEERAFVDA*EILGGATECFVKIR
Trigger: TCTGATCTTCACAAAACACTCTGTGGCTCCACCCAATATCTCTCAGGCATCTACAAAGGCTCTCTCTTCCTCCGTCAGAGTCTGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS TCA 90 bp ATGCCCAGTGAGGCAAGATTTACGCGGCGTTTTTCGAGTCCTCTCTaGGCGATCAGAATAAAGAATCCAGTGTTCGAGATCACGCAGCCT +
Preference number: 5 (lower is better)
Translates to: MPSEARFTRRFSSPL*AIRIKNPVFEITQP
Trigger: AGGCTGCGTGATCTCGAACACTGGATTCTTTATTCTGATCGCTCAGAGAGGACTCGAAAAACGCCGCGTAAATCTTGCCTCACTGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS TCA 72 bp CCCATGCGGTGGAGGCCCGTCCCACAGCTCTCCTGGTaGGATAGGGCGGGCTCGGTGCGGCCGGGCGGGGCT +
Preference number: 6 (lower is better)
Translates to: PMRWRPVPQLSW*DRAGSVRPGGA
Trigger: AGCCCCGCCCGGCCGCACCGAGCCCGCCCTATCTCACCAGGAGAGCTGTGGGACGGGCCTCCACCGCATGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000569703.5
CDS GCA 72 bp GCGGTGGAACAGCCTCCGCAAACGAAGTGCTCGGGGTaGCAGGCGCGGCCCAGAGCCGTCACCACCTGCGAG +
Preference number: 6 (lower is better)
Translates to: AVEQPPQTKCSG*QARPRAVTTCE
Trigger: CTCGCAGGTGGTGACGGCTCTGGGCCGCGCCTGGCACCCCGAGCACTTCGTTTGCGGAGGCTGTTCCACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CCA 72 bp TGCCAGGCGCGGCCCAGAGCCGTCACCACCTGCGAGTaGGAGGTGAGGCGGGTCAGAGCGGCTCTGACAACC +
Preference number: 6 (lower is better)
Translates to: CQARPRAVTTCE*EVRRVRAALTT
Trigger: GGTTGTCAGAGCCGCTCTGACCCGCCTCACCTCCCACTCGCAGGTGGTGACGGCTCTGGGCCGCGCCTGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CCA 72 bp TCCGAGGGAGCCTTGGGGAAGGAGGAGCCGGGTCTATaGCGGGACAGAGCGGGGAGGGCTCGGGTCCGGAGT +
Preference number: 6 (lower is better)
Translates to: SEGALGKEEPGL*RDRAGRARVRS
Trigger: ACTCCGGACCCGAGCCCTCCCCGCTCTGTCCCGCCATAGACCCGGCTCCTCCTTCCCCAAGGCTCCCTCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CCA 72 bp GGGCTCGGTGCGGCCGGGCGGGGCTCACGTGTCGGATaGGCTGGTTGCAGAAGCCACATCTTGGCGAGAAGC +
Preference number: 6 (lower is better)
Translates to: GLGAAGRGSRVG*AGCRSHILARS
Trigger: GCTTCTCGCCAAGATGTGGCTTCTGCAACCAGCCCATCCGACACGTGAGCCCCGCCCGGCCGCACCGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000569703.5
CDS TCA 72 bp CGCTCGTGGAAACCTAGGAGAGGGAACCGAGTGGGCTaGAAGCAAAGGGTGCGGGCGGGACGGGGGACCCAC +
Preference number: 6 (lower is better)
Translates to: RSWKPRRGNRVG*KQRVRAGRGTH
Trigger: GTGGGTCCCCCGTCCCGCCCGCACCCTTTGCTTTCAGCCCACTCGGTTCCCTCTCCTAGGTTTCCACGAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CCA 72 bp CCTCGCGCTCGTGGAAACCTAGGAGAGGGAACCGAGTaGGCTGAAAGCAAAGGGTGCGGGCGGGACGGGGGA +
Preference number: 6 (lower is better)
Translates to: PRARGNLGEGTE*AESKGCGRDGG
Trigger: TCCCCCGTCCCGCCCGCACCCTTTGCTTTCAGCCCACTCGGTTCCCTCTCCTAGGTTTCCACGAGCGCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CCA 72 bp GATCTAGCTCACAGAGCCCGGTACCCAAGACACCGCTaGAAGAGGAGAATGGAGGGGCCGCCGGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: DLAHRARYPRHR*KRRMEGPPGLQ
Trigger: CTGCAGCCCCGGCGGCCCCTCCATTCTCCTCTTCCAGCGGTGTCTTGGGTACCGGGCTCTGTGAGCTAGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000561785.5
ENST00000562165.5
ENST00000562566.5
ENST00000564176.5
ENST00000564804.1
ENST00000565360.5
ENST00000565454.5
ENST00000567066.6
ENST00000567524.1
ENST00000567607.5
ENST00000568142.2
ENST00000569254.5
ENST00000569703.5
CDS CCA 72 bp GGGCAGAGGCGAAAAGCAGAAGTAAGAAGACAGGGATaGGGAGATGCGGGAGAGCGACGGCGGGGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: GQRRKAEVRRQG*GDAGERRRGGS
Trigger: GCTGCCTCCCCGCCGTCGCTCTCCCGCATCTCCCCATCCCTGTCTTCTTACTTCTGCTTTTCGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CCA 72 bp TCCCCAGACCCTGTCTACAGAGCGGAGACGCACAGGTaGGATGACAGGCCTGCACTCTGCCCCACTGAGGCT +
Preference number: 6 (lower is better)
Translates to: SPDPVYRAETHR*DDRPALCPTEA
Trigger: AGCCTCAGTGGGGCAGAGTGCAGGCCTGTCATCCCACCTGTGCGTCTCCGCTCTGTAGACAGGGTCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567524.1
ENST00000569254.5
CDS GCA 72 bp CCGCCCTGGGCTCCTCACTGGCGCTTCGCTGGGACCTaGCTTCTGATTGGCTGTTTATCTGCGGTACAGCGT +
Preference number: 6 (lower is better)
Translates to: PPWAPHWRFAGT*LLIGCLSAVQR
Trigger: ACGCTGTACCGCAGATAAACAGCCAATCAGAAGGCAGGTCCCAGCGAAGCGCCAGTGAGGAGCCCAGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CCA 72 bp TTCCAGCCCCAGGCTTCGCAGGGAGGACGAGATACCTaGGTCCCCCTTCCGGACAAGACACCTCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: FQPQASQGGRDT*VPLPDKTPLSI
Trigger: GATGGAGAGAGGTGTCTTGTCCGGAAGGGGGACCCAGGTATCTCGTCCTCCCTGCGAAGCCTGGGGCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CAA 72 bp GACCGAGGCTTGCATACCGTGCTGTACAGGTGGTCCTaGTCCCCCGAGGCTCCTGAAGACTCCCCAGACCCT +
Preference number: 6 (lower is better)
Translates to: DRGLHTVLYRWS*SPEAPEDSPDP
Trigger: AGGGTCTGGGGAGTCTTCAGGAGCCTCGGGGGACAAGGACCACCTGTACAGCACGGTATGCAAGCCTCGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000361773.7
ENST00000394858.6
ENST00000394863.8
ENST00000562165.5
ENST00000562566.5
ENST00000564804.1
ENST00000565454.5
ENST00000567066.6
ENST00000567607.5
ENST00000568142.2
ENST00000569254.5
ENST00000569703.5
CDS CAA 90 bp CTTACTTGCCCAGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTaGGCCTGGGTGGGAACACCCCGGCGGCTGAGGTCGGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: LTCPAIGLLQEPQRP*AWVGTPRRLRSDCS
Trigger: GCTGCAGTCCGACCTCAGCCGCCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAAGTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS TCA 72 bp CCTCAGTCTTCGTCTCTGAGCACCCGCGTGAAACCCTaGAGCCTTCGCGGGCGCCTAGGCACTCCTGAGTTA +
Preference number: 6 (lower is better)
Translates to: PQSSSLSTRVKP*SLRGRLGTPEL
Trigger: TAACTCAGGAGTGCCTAGGCGCCCGCGAAGGCTTCAGGGTTTCACGCGGGTGCTCAGAGACGAAGACTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS TCA 72 bp CCGCAACTGACGCAGCAGAAATGCTCTGGGTGCCAGTaGGTGCCCAAGGCGGTCACCATCTTCTGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: PQLTQQKCSGCQ*VPKAVTIFCRE
Trigger: CTCCCTGCAGAAGATGGTGACCGCCTTGGGCACTCACTGGCACCCAGAGCATTTCTGCTGCGTCAGTTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CCA 72 bp GTGCTGGGAAGCAGAGTGGGAGCCTGGGTTCAGGGGTaGGGAATCCAAGCCTCCTCACCTGAGACTCAGTTG +
Preference number: 6 (lower is better)
Translates to: VLGSRVGAWVQG*GIQASSPETQL
Trigger: CAACTGAGTCTCAGGTGAGGAGGCTTGGATTCCCCACCCCTGAACCCAGGCTCCCACTCTGCTTCCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561785.5
ENST00000564176.5
ENST00000567524.1
CDS CAA 90 bp GCCCAGGAAAGGCAGGAAGGGAGAGGCAGGAAGGGGGACGTGGAGTaGGAAAGGAGGCGCGGGCAGAGGCGAAAAGCAGAAGTAAGAAGA +
Preference number: 6 (lower is better)
Translates to: AQERQEGRGRKGDVE*ERRRGQRRKAEVRR
Trigger: TCTTCTTACTTCTGCTTTTCGCCTCTGCCCGCGCCTCCTTTCCAACTCCACGTCCCCCTTCCTGCCTCTCCCTTCCTGCCTTTCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS TCA 72 bp CCGTCTTCCAGCTGCGCTCCAGGATTGACCTATACATaGGGCACAGCAGGCACAGCGCCTGGAGCCCACAAT +
Preference number: 6 (lower is better)
Translates to: PSSSCAPGLTYT*GTAGTAPGAHN
Trigger: ATTGTGGGCTCCAGGCGCTGTGCCTGCTGTGCCTCATGTATAGGTCAATCCTGGAGCGCAGCTGGAAGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CAA 90 bp CTCCCTTCTCACAAGGCTCCACTTACTTGCCCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGAACACCCCGG +
Preference number: 6 (lower is better)
Translates to: LPSHKAPLTCPAIGL*QEPQRPLAWVGTPR
Trigger: CCGGGGTGTTCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAAGTAAGTGGAGCCTTGTGAGAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS GCA 72 bp CTTCGCTGGGACCTGCCTTCTGATTGGCTGTTTATCTaGGGTACAGCGTCAGTTACCCCTACCGAGCAGCGC +
Preference number: 6 (lower is better)
Translates to: LRWDLPSDWLFI*GTASVTPTEQR
Trigger: GCGCTGCTCGGTAGGGGTAACTGACGCTGTACCGCAGATAAACAGCCAATCAGAAGGCAGGTCCCAGCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS GCA 72 bp GAGGTGAGGCGGGTCAGAGCGGCTCTGACAACCACATaGCCAGTGAGGCAAGATTTACGCGGCGTTTTTCGA +
Preference number: 6 (lower is better)
Translates to: EVRRVRAALTTT*PVRQDLRGVFR
Trigger: TCGAAAAACGCCGCGTAAATCTTGCCTCACTGGGCATGTGGTTGTCAGAGCCGCTCTGACCCGCCTCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CAA 72 bp TCACGTGTCGGATGGGCTGGTTGCAGAAGCCACATCTaGGCGAGAAGCGCTCAAAGTAGCACTCGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: SRVGWAGCRSHI*ARSAQSSTRGR
Trigger: TCTGCCCCGAGTGCTACTTTGAGCGCTTCTCGCCAAGATGTGGCTTCTGCAACCAGCCCATCCGACACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000569703.5
CDS GCA 72 bp GGCCCTCAGCTTTCTGATTGGACGCTCTCTCTTCCATaGTGGTTAACTCCTCCCTCTACCTACACAGGCCCC +
Preference number: 6 (lower is better)
Translates to: GPQLSDWTLSLP*WLTPPSTYTGP
Trigger: GGGGCCTGTGTAGGTAGAGGGAGGAGTTAACCAGCATGGAAGAGAGAGCGTCCAATCAGAAAGCTGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CCA 72 bp TCCTCACTGGCGCTTCGCTGGGACCTGCCTTCTGATTaGCTGTTTATCTGCGGTACAGCGTCAGTTACCCCT +
Preference number: 6 (lower is better)
Translates to: SSLALRWDLPSD*LFICGTASVTP
Trigger: AGGGGTAACTGACGCTGTACCGCAGATAAACAGCCAATCAGAAGGCAGGTCCCAGCGAAGCGCCAGTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CCA 72 bp CCTCAGCTTTCTGATTGGACGCTCTCTCTTCCATGCTaGTTAACTCCTCCCTCTACCTACACAGGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: PQLSDWTLSLPC*LTPPSTYTGPA
Trigger: GGCGGGGCCTGTGTAGGTAGAGGGAGGAGTTAACCAGCATGGAAGAGAGAGCGTCCAATCAGAAAGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS CAA 72 bp GCTCTTCACCCAAGCCAAATTTGGCTCCCCTCCAAATaGCTCCATTGGCCCAGTGCCTGGCCCTCAGCTTTC +
Preference number: 6 (lower is better)
Translates to: ALHPSQIWLPSK*LHWPSAWPSAF
Trigger: GAAAGCTGAGGGCCAGGCACTGGGCCAATGGAGCAATTTGGAGGGGAGCCAAATTTGGCTTGGGTGAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS CAA 90 bp GACAAGACACCTCTCTCCATCCCTGCATCCCCAGATCCGGGTCTTTaGAGCCCTTTCACTTCCAGAACCCAGAAGTCCTGCCCTCAGTCT +
Preference number: 6 (lower is better)
Translates to: DKTPLSIPASPDPGL*SPFTSRTQKSCPQS
Trigger: AGACTGAGGGCAGGACTTCTGGGTTCTGGAAGTGAAAGGGCTCAAAAGACCCGGATCTGGGGATGCAGGGATGGAGAGAGGTGTCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS TCA 72 bp TTGCTCCATTGGCCCAGTGCCTGGCCCTCAGCTTTCTaGTTGGACGCTCTCTCTTCCATGCTGGTTAACTCC +
Preference number: 6 (lower is better)
Translates to: LLHWPSAWPSAF*LDALSSMLVNS
Trigger: GGAGTTAACCAGCATGGAAGAGAGAGCGTCCAATCAGAAAGCTGAGGGCCAGGCACTGGGCCAATGGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564176.5
CDS GCA 72 bp AATTTGGCTCCCCTCCAAATTGCTCCATTGGCCCAGTaGCTGGCCCTCAGCTTTCTGATTGGACGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: NLAPLQIAPLAQ*LALSFLIGRSL
Trigger: GAGAGAGCGTCCAATCAGAAAGCTGAGGGCCAGGCACTGGGCCAATGGAGCAATTTGGAGGGGAGCCAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS GCA 72 bp CTCTTCACCCAAGCCAAATTTGGCTCCCCTCCAAATTaGTCCATTGGCCCAGTGCCTGGCCCTCAGCTTTCT +
Preference number: 6 (lower is better)
Translates to: LFTQAKFGSPPN*SIGPVPGPQLS
Trigger: AGAAAGCTGAGGGCCAGGCACTGGGCCAATGGAGCAATTTGGAGGGGAGCCAAATTTGGCTTGGGTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS CCA 72 bp GAATCCAGTGTTCGAGATCACGCAGCCTGTAAGCGATaGAGATCTAGCTCCCGTGTTCCGTCTTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: ESSVRDHAACKR*RSSSRVPSSSC
Trigger: GCAGCTGGAAGACGGAACACGGGAGCTAGATCTCCATCGCTTACAGGCTGCGTGATCTCGAACACTGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CAA 72 bp CACAAGGCTCCACTTACTTGCCCAGCAATAGGTTTATaGCAGGAGCCACAGAGGCCTTTGGCCTGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: HKAPLTCPAIGL*QEPQRPLAWVG
Trigger: TCCCACCCAGGCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAAGTAAGTGGAGCCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CAA 90 bp GTCTGTGACAGGTCTCTGCCTCCCTTCTCACAAGGCTCCACTTACTaGCCCAGCAATAGGTTTATTGCAGGAGCCACAGAGGCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: VCDRSLPPFSQGSTY*PSNRFIAGATEAFG
Trigger: GCCAAAGGCCTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAAGTAAGTGGAGCCTTGTGAGAAGGGAGGCAGAGACCTGTCACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS GCA 72 bp CCAGCTCTCACTAAAGATGGGTCTGTGACAGGTCTCTaGCTCCCTTCTCACAAGGCTCCACTTACTTGCCCA +
Preference number: 6 (lower is better)
Translates to: PALTKDGSVTGL*LPSHKAPLTCP
Trigger: TGGGCAAGTAAGTGGAGCCTTGTGAGAAGGGAGGCAGAGACCTGTCACAGACCCATCTTTAGTGAGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CAA 90 bp ATCTTCTCTGATGCAGTCAAAATGGGCTCTTCACCCAAGCCAAATTaGGCTCCCCTCCAAATTGCTCCATTGGCCCAGTGCCTGGCCCTC +
Preference number: 6 (lower is better)
Translates to: IFSDAVKMGSSPKPN*APLQIAPLAQCLAL
Trigger: GAGGGCCAGGCACTGGGCCAATGGAGCAATTTGGAGGGGAGCCAAATTTGGCTTGGGTGAAGAGCCCATTTTGACTGCATCAGAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS CCA 72 bp ATGCAGTCAAAATGGGCTCTTCACCCAAGCCAAATTTaGCTCCCCTCCAAATTGCTCCATTGGCCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: MQSKWALHPSQI*LPSKLLHWPSA
Trigger: GGCACTGGGCCAATGGAGCAATTTGGAGGGGAGCCAAATTTGGCTTGGGTGAAGAGCCCATTTTGACTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS CAA 72 bp GATGCAGTCAAAATGGGCTCTTCACCCAAGCCAAATTaGGCTCCCCTCCAAATTGCTCCATTGGCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: DAVKMGSSPKPN*APLQIAPLAQC
Trigger: GCACTGGGCCAATGGAGCAATTTGGAGGGGAGCCAAATTTGGCTTGGGTGAAGAGCCCATTTTGACTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS CAA 72 bp AGGTCTCTGCCTCCCTTCTCACAAGGCTCCACTTACTaGCCCAGCAATAGGTTTATTGCAGGAGCCACAGAG +
Preference number: 6 (lower is better)
Translates to: RSLPPFSQGSTY*PSNRFIAGATE
Trigger: CTCTGTGGCTCCTGCAATAAACCTATTGCTGGGCAAGTAAGTGGAGCCTTGTGAGAAGGGAGGCAGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS TCA 72 bp GCAGAGCACTGCTCGAAGGGTAGCAAGGAATATTTATaGCCAGAATATCCCAGTTGCTCACGCTTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: AEHCSKGSKEYL*PEYPSCSRLEP
Trigger: TGGCTCCAAGCGTGAGCAACTGGGATATTCTGGTCATAAATATTCCTTGCTACCCTTCGAGCAGTGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS TCA 72 bp TGGAGCCACAGAGTGTTTTGTGAAGATCAGATGAGATaGGGGTTTGTAAAGGAGCTGGCACAGTGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: WSHRVFCEDQMR*GFVKELAQCLA
Trigger: TGCCAGGCACTGTGCCAGCTCCTTTACAAACCCTCATCTCATCTGATCTTCACAAAACACTCTGTGGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS TCA 72 bp ATGATCCACAAAAGTCACAATGCCACCCTCCTTTGCTaGGATGGGCAATTCTGGGCTGGGAGTCAGGTACTT +
Preference number: 6 (lower is better)
Translates to: MIHKSHNATLLC*DGQFWAGSQVL
Trigger: AAGTACCTGACTCCCAGCCCAGAATTGCCCATCTCAGCAAAGGAGGGTGGCATTGTGACTTTTGTGGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS TCA 72 bp GAGGCAAGATTTACGCGGCGTTTTTCGAGTCCTCTCTaGGCGATCAGAATAAAGAATCCAGTGTTCGAGATC +
Preference number: 6 (lower is better)
Translates to: EARFTRRFSSPL*AIRIKNPVFEI
Trigger: GATCTCGAACACTGGATTCTTTATTCTGATCGCTCAGAGAGGACTCGAAAAACGCCGCGTAAATCTTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS TCA 72 bp CCTGAGAGATATTGGGTGGAGCCACAGAGTGTTTTGTaGAGATCAGATGAGATGAGGGTTTGTAAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: PERYWVEPQSVL*RSDEMRVCKGA
Trigger: AGCTCCTTTACAAACCCTCATCTCATCTGATCTTCACAAAACACTCTGTGGCTCCACCCAATATCTCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564176.5
ENST00000568142.2
CDS CCA 72 bp GTTAGATCAGAAGATAAGGTTCCCAGTGGGCAGTACTaGAGAAGGACAGAAGCCAGTATTAAGAGAAGAGGT +
Preference number: 6 (lower is better)
Translates to: VRSEDKVPSGQY*RRTEASIKRRG
Trigger: ACCTCTTCTCTTAATACTGGCTTCTGTCCTTCTCCAGTACTGCCCACTGGGAACCTTATCTTCTGATCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5
CDS CCA 72 bp AATATTTATGACCAGAATATCCCAGTTGCTCACGCTTaGAGCCAAGCACAAACCCAGCCTCCTGATTATTTT +
Preference number: 6 (lower is better)
Translates to: NIYDQNIPVAHA*SQAQTQPPDYF
Trigger: AAAATAATCAGGAGGCTGGGTTTGTGCTTGGCTCCAAGCGTGAGCAACTGGGATATTCTGGTCATAAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562566.5
ENST00000564176.5