Pregenerated sensors for TGDS (Homo sapiens)
Ensembl gene IDs: ENSG00000088451Ensembl transcript IDs: ENST00000261296.7, ENST00000470480.1, ENST00000498294.5
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTTCAGAGACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTaGCTTCTCCCTAGCACCACTACCCCTCATGGTTGTCCGAATCAG | + |
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Preference number: 1 (lower is better) Translates to: ISETFLGTEFKTSEG*LLPSTTTPHGCPNQ Trigger: CTGATTCGGACAACCATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGTCTCTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| 3UTR CCA 90 bp | AGCACCACTACCCCTCATGGTTGTCCGAATCAGGAGACTTCTTCCTaGCTACCCTTAGGGAGAGTCTTCTACACCTATTATTTCCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: STTTPHGCPNQETSS*LPLGRVFYTYYFLV Trigger: AACTAGGAAATAATAGGTGTAGAAGACTCTCCCTAAGGGTAGCCAGGAAGAAGTCTCCTGATTCGGACAACCATGAGGGGTAGTGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCCAGGAGACTTCTTCCTaGCTACCCTTAGGGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTQETSS*LPLGRV Trigger: GACTCTCCCTAAGGGTAGCCAGGAAGAAGTCTCCTG...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| 3UTR CCA 72 bp | ACCCCTCATGGTTGTCCGAATCAGGAGACTTCTTCCTaGCTACCCTTAGGGAGAGTCTTCTACACCTATTAT | + |
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Preference number: 3 (lower is better) Translates to: TPHGCPNQETSS*LPLGRVFYTYY Trigger: ATAATAGGTGTAGAAGACTCTCCCTAAGGGTAGCCAGGAAGAAGTCTCCTGATTCGGACAACCATGAGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| 3UTR-3UTR CAA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCAAACTCTCCCAAAGATaGAGGCATTCTGCATTTGAA | + |
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Preference number: 3 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTKLSQR*RHSAFE Trigger: TTCAAATGCAGAATGCCTCAATCTTTGGGAGAGTTT...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR TCA 90 bp | CTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCACTACCCCTCATGTCATATGTGATGCAATaGAACCAGCACCGCCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSSKPVKVAFSLAPLPLMSYVMQ*NQHRRS Trigger: TGACCGGCGGTGCTGGTTTCATTGCATCACATATGA...CATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCTCCACTCTGGCTTCATaGGCAGCACTTACCAAAACG | + |
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Preference number: 4 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTSTLAS*AALTKT Trigger: CGTTTTGGTAAGTGCTGCTCATGAAGCCAGAGTGGA...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR TCA 90 bp | CTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCACTACCCCTCATGGGCAAGCTGGACAACTaGCATTTCAAAATTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSSKPVKVAFSLAPLPLMGKLDN*HFKIGS Trigger: GGAACCAATTTTGAAATGTCAGTTGTCCAGCTTGCC...CATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR TCA 90 bp | CTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCACTACCCCTCATGAGAGACAATCATATGTaGTGCAATGAAACCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: LSSKPVKVAFSLAPLPLMRDNHM*CNETST Trigger: GGTGCTGGTTTCATTGCATCACATATGATTGTCTCT...CATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR GCA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCGCCCTGACCCATGAATaGAACATTTCCTGTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTALTHE*NISCCA Trigger: AGCACAACAGGAAATGTTGCATTCATGGGTCAGGGC...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR GCA 90 bp | CTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCACTACCCCTCATGAAGATTCTTCAAGCTTaGACAGTAATCCAGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LSSKPVKVAFSLAPLPLMKILQA*TVIQLV Trigger: GACAAGCTGGATTACTGTGCAAGCTTGAAGAATCTT...CATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CCA 90 bp | CTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCACTACCCCTCATGGTTGTATTAGTTCTTTaGCAAGCTGGACAACTGACA | + |
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Preference number: 4 (lower is better) Translates to: LSSKPVKVAFSLAPLPLMVVLVL*QAGQLT Trigger: TGTCAGTTGTCCAGCTTGCCAAAGAACTAATACAAC...CATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CCA 90 bp | TTTCATACCACTTGGCGAGGTAGGATAACTTTCTTCTTTGACAACTGTCTCGACCACCACTACCCCTCATaGTTGTCCGAATCAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: FHTTWRGRITFFFDNCLDHHYPS*LSESGD Trigger: GTCTCCTGATTCGGACAACCATGAGGGGTAGTGGTG...GTCGAGACAGTTGTCAAAGAAGAAAGTTATCCTACCTCGCCAAGTGGTATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCTCTTGTTTGAAGCCCTaGCCCATGAATGCAACATTT | + |
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Preference number: 4 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTSCLKP*PMNATF Trigger: AAATGTTGCATTCATGGGTCAGGGCTTCAAACAAGA...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CCA 90 bp | CTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCACTACCCCTCATGAGTTCTTTGGCAAGCTaGACAACTGACATTTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LSSKPVKVAFSLAPLPLMSSLAS*TTDISK Trigger: TTTTGAAATGTCAGTTGTCCAGCTTGCCAAAGAACT...CATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCTTCCATTTCAGACTCTaGATTGGTCTCTTTGATCAG | + |
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Preference number: 4 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTFHFRL*IGLFDQ Trigger: CTGATCAAAGAGACCAATTCAGAGTCTGAAATGGAA...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR GCA 90 bp | TTTCATACCACTTGGCGAGGTAGGATAACTTTCTTCTTTGACAACTGTCTCGACAAAACCAGTGAAGGTTaGCTTCTCCCTAGCACCACT | + |
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Preference number: 4 (lower is better) Translates to: FHTTWRGRITFFFDNCLDKTSEG*LLPSTT Trigger: AGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTT...GTCGAGACAGTTGTCAAAGAAGAAAGTTATCCTACCTCGCCAAGTGGTATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCTGTAGGTTGTTTGGGTaGAGATTCATCAAATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTCRLFG*RFIKFL Trigger: AAGGAATTTGATGAATCTTCACCCAAACAACCTACA...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCTCTTGTGATGACAACTaGAAACTTATATTGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTSCDDN*KLILFP Trigger: TGGGAACAATATAAGTTTCCAGTTGTCATCACAAGA...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCTGGAATAACCTTTTCTaGATATTGATGTGGTCCATA | + |
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Preference number: 4 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTWNNLF*ILMWSI Trigger: TATGGACCACATCAATATCCAGAAAAGGTTATTCCA...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR TCA 90 bp | TTTCATACCACTTGGCGAGGTAGGATAACTTTCTTCTTTGACAACTGTCTCGACAAAGGCACGTACGAATaGAAGATCTACATGTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: FHTTWRGRITFFFDNCLDKGTYE*KIYMCL Trigger: CAAACACATGTAGATCTTTCATTCGTACGTGCCTTT...GTCGAGACAGTTGTCAAAGAAGAAAGTTATCCTACCTCGCCAAGTGGTATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR TCA 90 bp | TTTCATACCACTTGGCGAGGTAGGATAACTTTCTTCTTTGACAACTGTCTCGACCGACTATATAAATGGTaGTTATACCGGAAAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: FHTTWRGRITFFFDNCLDRLYKW*LYRKGF Trigger: GAACCCTTTCCGGTATAATCACCATTTATATAGTCG...GTCGAGACAGTTGTCAAAGAAGAAAGTTATCCTACCTCGCCAAGTGGTATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CCA 90 bp | TTTCATACCACTTGGCGAGGTAGGATAACTTTCTTCTTTGACAACTGTCTCGACTTCTGGATATTGATGTaGTCCATAAACATTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: FHTTWRGRITFFFDNCLDFWILM*SINITA Trigger: AGCAGTAATGTTTATGGACCACATCAATATCCAGAA...GTCGAGACAGTTGTCAAAGAAGAAAGTTATCCTACCTCGCCAAGTGGTATGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS TCA 90 bp | GGTTTCTGGGGAGCCACTGCTTGGCTAGCGGCGCCATTACCTACATaGAACCAGCACCGCCGGTCACCAGGACCCGCTTCGCAAAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GFWGATAWLAAPLPT*NQHRRSPGPASQSR Trigger: GCGGCTTTGCGAAGCGGGTCCTGGTGACCGGCGGTGCTGGTTTCATGTAGGTAATGGCGCCGCTAGCCAAGCAGTGGCTCCCCAGAAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498294.5 |
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| CDS TCA 90 bp | ACATCTCCCAGCTCAGCAGTGCCTAGTACCGTAAAGAGTATGGTCTaGAAAGCGCAGGGAAGTTCCGCCGCGACCTTTTGCGACGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: TSPSSAVPSTVKSMV*KAQGSSAATFCDAP Trigger: AGGCGCGTCGCAAAAGGTCGCGGCGGAACTTCCCTGCGCTTTTCAGACCATACTCTTTACGGTACTAGGCACTGCTGAGCTGGGAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498294.5 |
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| CDS-3UTR CAA 90 bp | CTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCACTACCCCTCATGCACTACCCCTCATGGTaGTCCGAATCAGGAGACTTC | + |
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Preference number: 5 (lower is better) Translates to: LSSKPVKVAFSLAPLPLMHYPSW*SESGDF Trigger: GAAGTCTCCTGATTCGGACAACCATGAGGGGTAGTG...CATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CAA 90 bp | CTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCACTACCCCTCATGCATAAAGGAAGTTTCTaGTTTGAAGCCCTGACCCAT | + |
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Preference number: 5 (lower is better) Translates to: LSSKPVKVAFSLAPLPLMHKGSF*FEALTH Trigger: ATGGGTCAGGGCTTCAAACAAGAAACTTCCTTTATG...CATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CAA 90 bp | CTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCACTACCCCTCATGGGGTATCTCATGTCATaGGTGGGTCTATCATTAACA | + |
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Preference number: 5 (lower is better) Translates to: LSSKPVKVAFSLAPLPLMGYLMS*VGLSLT Trigger: TGTTAATGATAGACCCACCAATGACATGAGATACCC...CATGAGGGGTAGTGGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS GCA 90 bp | CTGTATACGCTGACATACTGGTCTGACTGCAAACAGGGAGTCAACTaGAGCGTGACAGTAGAGGTAGAAGTATTCTATAGTGCTTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: LYTLTYWSDCKQGVN*SVTVEVEVFYSALE Trigger: CTCTAAAGCACTATAGAATACTTCTACCTCTACTGTCACGCTGCAGTTGACTCCCTGTTTGCAGTCAGACCAGTATGTCAGCGTATACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470480.1 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCAACTGGAAACTTATATaGTTCCCAGTAAGACTGTAC | + |
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Preference number: 5 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTNWKLI*FPVRLY Trigger: GTACAGTCTTACTGGGAACAATATAAGTTTCCAGTT...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCATGCAACATTTCCTGTaGTGCTGTAGCAAAGATATA | + |
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Preference number: 5 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTMQHFL*CCSKDI Trigger: TATATCTTTGCTACAGCACAACAGGAAATGTTGCAT...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTAGGCACTGAGTTCAAAACCAGTGAAGGTTGCCTTCTCCCTAGCACCATTTCAGACTCTGAATaGGTCTCTTTGATCAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: TFLGTEFKTSEGCLLPSTISDSE*VSLISC Trigger: ACAACTGATCAAAGAGACCAATTCAGAGTCTGAAAT...GGTGCTAGGGAGAAGGCAACCTTCACTGGTTTTGAACTCAGTGCCTAAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CAA 90 bp | TTTCATACCACTTGGCGAGGTAGGATAACTTTCTTCTTTGACAACTGTCTCGACCAAGATTCTTCAAGCTaGCACAGTAATCCAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: FHTTWRGRITFFFDNCLDQDSSS*HSNPAC Trigger: ACAAGCTGGATTACTGTGCAAGCTTGAAGAATCTTG...GTCGAGACAGTTGTCAAAGAAGAAAGTTATCCTACCTCGCCAAGTGGTATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS-3UTR CAA 90 bp | TTTCATACCACTTGGCGAGGTAGGATAACTTTCTTCTTTGACAACTGTCTCGACAGTTGTATTAGTTCTTaGGCAAGCTGGACAACTGAC | + |
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Preference number: 5 (lower is better) Translates to: FHTTWRGRITFFFDNCLDSCISS*ASWTTD Trigger: GTCAGTTGTCCAGCTTGCCAAAGAACTAATACAACT...GTCGAGACAGTTGTCAAAGAAGAAAGTTATCCTACCTCGCCAAGTGGTATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS TCA 72 bp | GGAGCCACTGCTTGGCTAGCGGCGCCATTACCTACATaGAACCAGCACCGCCGGTCACCAGGACCCGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: GATAWLAAPLPT*NQHRRSPGPAS Trigger: CGAAGCGGGTCCTGGTGACCGGCGGTGCTGGTTTCATGTAGGTAATGGCGCCGCTAGCCAAGCAGTGGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498294.5 |
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| CDS TCA 72 bp | AGCTCAGCAGTGCCTAGTACCGTAAAGAGTATGGTCTaGAAAGCGCAGGGAAGTTCCGCCGCGACCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSAVPSTVKSMV*KAQGSSAATFC Trigger: GCAAAAGGTCGCGGCGGAACTTCCCTGCGCTTTTCAGACCATACTCTTTACGGTACTAGGCACTGCTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498294.5 |
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| CDS TCA 72 bp | CTTTCAAAATCCCTGCTAAGTGGTGAAGCCAGCTGGTaGGTGTCAGCCAGCTTGAGACTTAAAACTCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LSKSLLSGEASW*VSASLRLKTQV Trigger: AACTTGAGTTTTAAGTCTCAAGCTGGCTGACACTCACCAGCTGGCTTCACCACTTAGCAGGGATTTTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470480.1 |
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| CDS GCA 72 bp | CTGACATACTGGTCTGACTGCAAACAGGGAGTCAACTaGAGCGTGACAGTAGAGGTAGAAGTATTCTATAGT | + |
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Preference number: 6 (lower is better) Translates to: LTYWSDCKQGVN*SVTVEVEVFYS Trigger: ACTATAGAATACTTCTACCTCTACTGTCACGCTGCAGTTGACTCCCTGTTTGCAGTCAGACCAGTATGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470480.1 |
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| CDS TCA 72 bp | CTGGAAGATATTCGTGCCTACACAATAAAGATGAGTTaGGGCACAGTTAGCCAGCTGACACTAAGACAGTTA | + |
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Preference number: 6 (lower is better) Translates to: LEDIRAYTIKMS*GTVSQLTLRQL Trigger: TAACTGTCTTAGTGTCAGCTGGCTAACTGTGCCTCAACTCATCTTTATTGTGTAGGCACGAATATCTTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470480.1 |
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| CDS CCA 72 bp | GTTCTTTGGCAAGCTGGACAACTGACATTTCAAAATTaGTTCCGATGTTATAAATTTCACCTGGTTTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: VLWQAGQLTFQN*FRCYKFHLVSL Trigger: AAGGGAAACCAGGTGAAATTTATAACATCGGAACCAATTTTGAAATGTCAGTTGTCCAGCTTGCCAAAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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| CDS CAA 72 bp | TCTGAATTGGTCTCTTTGATCAGTTGTATTAGTTCTTaGGCAAGCTGGACAACTGACATTTCAAAATTGGTT | + |
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Preference number: 6 (lower is better) Translates to: SELVSLISCISS*ASWTTDISKLV Trigger: AACCAATTTTGAAATGTCAGTTGTCCAGCTTGCCAAAGAACTAATACAACTGATCAAAGAGACCAATTCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261296.7 |
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