RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TFRC (Homo sapiens)

Ensembl gene IDs: ENSG00000072274

Ensembl transcript IDs: ENST00000360110.9, ENST00000392396.7, ENST00000420415.5, ENST00000421258.1, ENST00000426789.5, ENST00000463047.1, ENST00000463356.5, ENST00000464011.1, ENST00000464368.1, ENST00000465288.5, ENST00000475593.5, ENST00000477148.1, ENST00000483983.5

Found 468 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGTTCACTCACGGAGCTTCGAACTTATTCATACCTACATTTAATTaGTCACCACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGA +
Preference number: 1 (lower is better)
Translates to: WFTHGASNLFIPTFN*SPRMGRQTCQTFRG
Trigger: TCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAGCTCCGTGAGTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR TCA 90 bp AGACCCTATGAACTTTTCCCTAGGAGGCCGTTTCCAACTGCCCTATaGCAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACG +
Preference number: 1 (lower is better)
Translates to: RPYELFPRRPFPTAL*QTADHHVYNDGSLT
Trigger: CGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAGTTGGAAACGGCCTCCTAGGGAAAAGTTCATAGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR TCA 90 bp CACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGATaGACATGCCACATGCTTTCATTTAAGTACGTGTGCGTAACACCC +
Preference number: 1 (lower is better)
Translates to: HCCKMHALYSYCVIR*TCHMLSFKYVCVTP
Trigger: GGGTGTTACGCACACGTACTTAAATGAAAGCATGTGGCATGTTCATCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR TCA 90 bp AAAACAAGCCCATCTCTTCTGAAAGTTAACTGTTTCTTTCAGGAATaGGGAAACCAGCTACATTCCTTATGGAAAGGCTTAGATCTCATT +
Preference number: 1 (lower is better)
Translates to: KTSPSLLKVNCFFQE*GNQLHSLWKGLDLI
Trigger: AATGAGATCTAAGCCTTTCCATAAGGAATGTAGCTGGTTTCCTCATTCCTGAAAGAAACAGTTAACTTTCAGAAGAGATGGGCTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR TCA 90 bp TTAACACTTTGGCCAAAATTTGGCAGCATATTATTCTTTAAAGTCTaGCAAACTGAGTCTGCAACTAAACACCTGAAACTGGTTCTCTTT +
Preference number: 1 (lower is better)
Translates to: LTLWPKFGSILFFKV*QTESATKHLKLVLF
Trigger: AAAGAGAACCAGTTTCAGGTGTTTAGTTGCAGACTCAGTTTGTCAGACTTTAAAGAATAATATGCTGCCAAATTTTGGCCAAAGTGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR TCA 90 bp TTATACATTATGGAAGACACTGCTCCCGATAATGTGTTAGGATTGTaGCAAAGGTACTGGAAATTTTGCAAAATGGGAATTAGAGTTACA +
Preference number: 1 (lower is better)
Translates to: LYIMEDTAPDNVLGL*QRYWKFCKMGIRVT
Trigger: TGTAACTCTAATTCCCATTTTGCAAAATTTCCAGTACCTTTGTCACAATCCTAACACATTATCGGGAGCAGTGTCTTCCATAATGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGTGTTTCTTTCAGGAATaGGGAAACCAGCTACATTCC +
Preference number: 2 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQCFFQE*GNQLHS
Trigger: GGAATGTAGCTGGTTTCCTCATTCCTGAAAGAAACA...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGGGCTTAGATCTCATTTaGAGAAGGTCTTTCAACCTG +
Preference number: 2 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQGLDLI*RRSFNL
Trigger: CAGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCC...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGAATATACTAAGTCTTTaGCTTCTGGTCCCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQNILSL*LLVPSF
Trigger: AAAAGAGGGGACCAGAAGCCAAAGACTTAGTATATT...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACTTCTTATCTGGTCAGTaGTCGCTTCTTAGCAACCCC +
Preference number: 2 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYFLSGQ*SLLSNP
Trigger: GGGGTTGCTAAGAAGCGAGCACTGACCAGATAAGAA...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACACCCTGCTGTTCTCATaGAAGCTATGGGTATCACAT +
Preference number: 2 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYTLLFS*KLWVSH
Trigger: ATGTGATACCCATAGCTTCCATGAGAACAGCAGGGT...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACGAAGGTCTTTCAACCTaGTATCTCCTATTTAGCATC +
Preference number: 2 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYEGLST*YLLFSI
Trigger: GATGCTAAATAGGAGATACCAGGTTGAAAGACCTTC...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGCATTTCAGACCTCATTaGCAAGAAAACAAGCCCATC +
Preference number: 2 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRHFRPH*QENKPI
Trigger: GATGGGCTTGTTTTCTTGCCAATGAGGTCTGAAATG...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR CAA 90 bp CAAGACCAGGAGCTTGTCACTAGTCTGATATTTCATTCAGGAATATaGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACC +
Preference number: 2 (lower is better)
Translates to: QDQELVTSLIFHSGI*SLLARTGLIGSNST
Trigger: GGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGACTAGTGACAAGCTCCTGGTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACCTAGTAGTACCAAGATaGTGGGATGGAATTTTAACA +
Preference number: 2 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYLVVPR*WDGILT
Trigger: TGTTAAAATTCCATCCCATCATCTTGGTACTACTAG...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGCCTGCAATCAACAGTTaGACCTCATTTTATCCAGCA +
Preference number: 2 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRPAINS*TSFYPA
Trigger: TGCTGGATAAAATGAGGTTCAACTGTTGATTGCAGG...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTTTCCAACTGCCCTATaGCAAACAGCTGATCATCAC +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTFPTAL*QTADHH
Trigger: GTGATGATCAGCTGTTTGTCATAGGGCAGTTGGAAA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTGAAGAGACTCACTGCTaGAAAATGCATGCCCTGTAT +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTEETHC*KMHALY
Trigger: ATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACGTTCTTTATACATTATaGAAGACACTGCTCCCGATA +
Preference number: 2 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYVLYTL*KTLLPI
Trigger: TATCGGGAGCAGTGTCTTCCATAATGTATAAAGAAC...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGATTGATCACCACGAATaGGTAGGCAGACGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEIDHHE*VGRRVR
Trigger: TCTGACACGTCTGCCTACCCATTCGTGGTGATCAAT...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTGTTTCTTTCAGGAATaGGGAAACCAGCTACATTCC +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTCFFQE*GNQLHS
Trigger: GGAATGTAGCTGGTTTCCTCATTCCTGAAAGAAACA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTCAATTACATTTGGCTaGCGGCTGTTTTCTAAAACC +
Preference number: 2 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRSITFG*RLFSKT
Trigger: GGTTTTAGAAAACAGCCGTCAGCCAAATGTAATTGA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGATACCTACATTTAATTaGTCACCACGAATGGGTAGG +
Preference number: 2 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRIPTFN*SPRMGR
Trigger: CCTACCCATTCGTGGTGATCAATTAAATGTAGGTAT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTGTGACACTAAGAACCTaGAGAGACCCTATGAACTTT +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTVTLRT*RDPMNF
Trigger: AAAGTTCATAGGGTCTCTTCAGGTTCTTAGTGTCAC...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGACAGGAATCTCAGCTATaGCCTTTTCACTTAGCTACG +
Preference number: 2 (lower is better)
Translates to: EETHCCKMHALYSYCVIRQESQL*PFHLAT
Trigger: CGTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTG...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACTGTATTAAAAGCTGCTaGCTAAAGACATCTAGTAGT +
Preference number: 2 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYCIKSC*LKTSSS
Trigger: ACTACTAGATGTCTTTAGGCAGCAGCTTTTAATACA...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTTAAGGCCTTATTCCTaGAATCAACAGTTGAACCTC +
Preference number: 2 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRLRPYS*NQQLNL
Trigger: GAGGTTCAACTGTTGATTGCAGGAATAAGGCCTTAA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACAGTGTTGACCATAAATaGAAAACTTCCAGTATCTGT +
Preference number: 2 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYSVDHK*KTSSIC
Trigger: ACAGATACTGGAAGTTTTGCATTTATGGTCAACACT...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGATTCTTATCTGGTCAGTaGTCGCTTCTTAGCAACCCC +
Preference number: 2 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRFLSGQ*SLLSNP
Trigger: GGGGTTGCTAAGAAGCGAGCACTGACCAGATAAGAA...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGTCATTTAAGTACGTGTaGGTAACACCCGAACCAGGA +
Preference number: 2 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRSFKYV*VTPEPG
Trigger: TCCTGGTTCGGGTGTTACGCACACGTACTTAAATGA...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTCATTTAAGTACGTGTaGGTAACACCCGAACCAGGA +
Preference number: 2 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHISFKYV*VTPEPG
Trigger: TCCTGGTTCGGGTGTTACGCACACGTACTTAAATGA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGGAAGAGACTCACTGCTaGAAAATGCATGCCCTGTAT +
Preference number: 2 (lower is better)
Translates to: SDISFRNIEPVSTYWLDREETHC*KMHALY
Trigger: ATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGACCCTGCTGTTCTCATaGAAGCTATGGGTATCACAT +
Preference number: 2 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEETLLFS*KLWVSH
Trigger: ATGTGATACCCATAGCTTCCATGAGAACAGCAGGGT...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAACCCTGCTGTTCTCATaGAAGCTATGGGTATCACAT +
Preference number: 2 (lower is better)
Translates to: EETHCCKMHALYSYCVIRTLLFS*KLWVSH
Trigger: ATGTGATACCCATAGCTTCCATGAGAACAGCAGGGT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTGTTTCTTTCAGGAATaGGGAAACCAGCTACATTCC +
Preference number: 2 (lower is better)
Translates to: FHSGILSLLARTGLIGSNCFFQE*GNQLHS
Trigger: GGAATGTAGCTGGTTTCCTCATTCCTGAAAGAAACA...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGGTGACACTAAGAACCTaGAGAGACCCTATGAACTTT +
Preference number: 2 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEVTLRT*RDPMNF
Trigger: AAAGTTCATAGGGTCTCTTCAGGTTCTTAGTGTCAC...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGGTGACACTAAGAACCTaGAGAGACCCTATGAACTTT +
Preference number: 2 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRVTLRT*RDPMNF
Trigger: AAAGTTCATAGGGTCTCTTCAGGTTCTTAGTGTCAC...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGAATATACTAAGTCTTTaGCTTCTGGTCCCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRNILSL*LLVPSF
Trigger: AAAAGAGGGGACCAGAAGCCAAAGACTTAGTATATT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGCTAAGATTAACACTTTaGCCAAAATTTGGCAGCATA +
Preference number: 2 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRLRLTL*PKFGSI
Trigger: TATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAG...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTCAAAAGGTCAATTCTaGATTAAAACTTGTCCGCAC +
Preference number: 2 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRSKGQF*IKTCPH
Trigger: GTGCGGACAAGTTTTAATCCAGAATTGACCTTTTGA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR CAA 90 bp CTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTaGATAGGAAGTAACTCAACCCTAACTGTAGAAAAGGGTTTTCTG +
Preference number: 2 (lower is better)
Translates to: LIFHSGILSLLARTG*IGSNSTLTVEKGFL
Trigger: CAGAAAACCCTTTTCTACAGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGTCAATTACATTTGGCTaGCGGCTGTTTTCTAAAACC +
Preference number: 2 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRSITFG*RLFSKT
Trigger: GGTTTTAGAAAACAGCCGTCAGCCAAATGTAATTGA...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTACACCTTGGATAAACTaGGCTATAAAATTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTTPWIN*AIKFCR
Trigger: CCTGCAAAATTTTATAGCTCAGTTTATCCAAGGTGT...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTACGATCTTCAAGCTTTaGAGATGTCATTGCATGAAG +
Preference number: 2 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHITIFKL*RCHCMK
Trigger: CTTCATGCAATGACATCTTCAAAGCTTGAAGATCGT...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAATACCTACATTTAATTaGTCACCACGAATGGGTAGG +
Preference number: 2 (lower is better)
Translates to: EETHCCKMHALYSYCVIRIPTFN*SPRMGR
Trigger: CCTACCCATTCGTGGTGATCAATTAAATGTAGGTAT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGATACCTACATTTAATTaGTCACCACGAATGGGTAGG +
Preference number: 2 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRIPTFN*SPRMGR
Trigger: CCTACCCATTCGTGGTGATCAATTAAATGTAGGTAT...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTATTGTGTTATACGATaGACATGCCACATGCTTTCA +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTYCVIR*TCHMLS
Trigger: TGAAAGCATGTGGCATGTTCATCGTATAACACAATA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp GACCTGAATCTTAACAAAATGTTGATCACGCCAGACTTTGCTGAGTTTAAATTCAGATTTTCATCTTTTTaGGATCCAGCCTCACGAGGG +
Preference number: 2 (lower is better)
Translates to: DLNLNKMLITPDFAEFKFRFSSF*DPASRG
Trigger: CCCTCGTGAGGCTGGATCTCAAAAAGATGAAAATCT...GAATTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGATTCAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421258.1
3UTR-3UTR GCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTTAAGGCCTTATTCCTaGAATCAACAGTTGAACCTC +
Preference number: 2 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHILRPYS*NQQLNL
Trigger: GAGGTTCAACTGTTGATTGCAGGAATAAGGCCTTAA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGGAAGGTCTTTCAACCTaGTATCTCCTATTTAGCATC +
Preference number: 2 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEEGLST*YLLFSI
Trigger: GATGCTAAATAGGAGATACCAGGTTGAAAGACCTTC...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGACATTTCAGACCTCATTaGCAAGAAAACAAGCCCATC +
Preference number: 2 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRHFRPH*QENKPI
Trigger: GATGGGCTTGTTTTCTTGCCAATGAGGTCTGAAATG...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTACTTCCAGTATCTGTTaGGTTTTATTAGCAGATGCT +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTTSSIC*VLLADA
Trigger: AGCATCTGCTAATAAAACCCAACAGATACTGGAAGT...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR CAA 90 bp CACCGAGTTTTGAGCGCTGTCTTTGACCTGAATCTTAACAAAATGTaGATCACGCCAGACTTTGCTGAGTTTAAATTCACGAAATTGATT +
Preference number: 2 (lower is better)
Translates to: HRVLSAVFDLNLNKM*ITPDFAEFKFTKLI
Trigger: AATCAATTTCGTGAATTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGATTCAGGTCAAAGACAGCGCTCAAAACTCGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421258.1
3UTR-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGCTAGTAGTACCAAGATaGTGGGATGGAATTTTAACA +
Preference number: 2 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRLVVPR*WDGILT
Trigger: TGTTAAAATTCCATCCCATCATCTTGGTACTACTAG...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGAACGATCTTCAAGCTTTaGAGATGTCATTGCATGAAG +
Preference number: 2 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRTIFKL*RCHCMK
Trigger: CTTCATGCAATGACATCTTCAAAGCTTGAAGATCGT...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR TCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAAGATTAAAGAGACTGTaGGTAGTGACACATTCAAGT +
Preference number: 2 (lower is better)
Translates to: EETHCCKMHALYSYCVIRRLKRL*VVTHSS
Trigger: ACTTGAATGTGTCACTACTCACAGTCTCTTTAATCT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTAGTGTTGACCATAAATaGAAAACTTCCAGTATCTGT +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTSVDHK*KTSSIC
Trigger: ACAGATACTGGAAGTTTTGCATTTATGGTCAACACT...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTAATTTACCCACCCAATaGTTAATGACCACAAAATGT +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTNLPTQ*LMTTKC
Trigger: ACATTTTGTGGTCATTAAGCATTGGGTGGGTAAATT...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTATACAAAGTCCCTCTaGTTTAAGTCAAAAGGTCAA +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTYTKSL*FKSKGQ
Trigger: TTGACCTTTTGACTTAAAGCAGAGGGACTTTGTATA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGATGAACATGCCACATaGTTTCATTTAAGTACGTGT +
Preference number: 2 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIDEHAT*FHLSTC
Trigger: ACACGTACTTAAATGAAAGCATGTGGCATGTTCATC...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTACCAAGATGATGGGATaGAATTTTAACATCAGGTTT +
Preference number: 2 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTTKMMG*NFNIRF
Trigger: AAACCTGATGTTAAAATTCCATCCCATCATCTTGGT...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACACTTCCAGTATCTGTTaGGTTTTATTAGCAGATGCT +
Preference number: 2 (lower is better)
Translates to: FHSGILSLLARTGLIGSNTSSIC*VLLADA
Trigger: AGCATCTGCTAATAAAACCCAACAGATACTGGAAGT...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGTCAAAAGGTCAATTCTaGATTAAAACTTGTCCGCAC +
Preference number: 2 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEESKGQF*IKTCPH
Trigger: GTGCGGACAAGTTTTAATCCAGAATTGACCTTTTGA...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGATGTATTAAAAGCTGCTaGCTAAAGACATCTAGTAGT +
Preference number: 2 (lower is better)
Translates to: EETHCCKMHALYSYCVIRCIKSC*LKTSSS
Trigger: ACTACTAGATGTCTTTAGGCAGCAGCTTTTAATACA...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGTGTATTAAAAGCTGCTaGCTAAAGACATCTAGTAGT +
Preference number: 2 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEECIKSC*LKTSSS
Trigger: ACTACTAGATGTCTTTAGGCAGCAGCTTTTAATACA...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACAATTTACCCACCCAATaGTTAATGACCACAAAATGT +
Preference number: 2 (lower is better)
Translates to: FHSGILSLLARTGLIGSNNLPTQ*LMTTKC
Trigger: ACATTTTGTGGTCATTAAGCATTGGGTGGGTAAATT...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGAATTTACCCACCCAATaGTTAATGACCACAAAATGT +
Preference number: 2 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEENLPTQ*LMTTKC
Trigger: ACATTTTGTGGTCATTAAGCATTGGGTGGGTAAATT...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTATACAAAGTCCCTCTaGTTTAAGTCAAAAGGTCAA +
Preference number: 2 (lower is better)
Translates to: FHSGILSLLARTGLIGSNYTKSL*FKSKGQ
Trigger: TTGACCTTTTGACTTAAAGCAGAGGGACTTTGTATA...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGTATACAAAGTCCCTCTaGTTTAAGTCAAAAGGTCAA +
Preference number: 2 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRYTKSL*FKSKGQ
Trigger: TTGACCTTTTGACTTAAAGCAGAGGGACTTTGTATA...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGACCAAGATGATGGGATaGAATTTTAACATCAGGTTT +
Preference number: 2 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRTKMMG*NFNIRF
Trigger: AAACCTGATGTTAAAATTCCATCCCATCATCTTGGT...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAGGCTTAGATCTCATTTaGAGAAGGTCTTTCAACCTG +
Preference number: 2 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEGLDLI*RRSFNL
Trigger: CAGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCC...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGCTAAGATTAACACTTTaGCCAAAATTTGGCAGCATA +
Preference number: 2 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRLRLTL*PKFGSI
Trigger: TATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAG...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAACTTCCAGTATCTGTTaGGTTTTATTAGCAGATGCT +
Preference number: 2 (lower is better)
Translates to: GYMLDTNDLQALKMSLHETSSIC*VLLADA
Trigger: AGCATCTGCTAATAAAACCCAACAGATACTGGAAGT...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR GCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAAGTGTTGACCATAAATaGAAAACTTCCAGTATCTGT +
Preference number: 2 (lower is better)
Translates to: GYMLDTNDLQALKMSLHESVDHK*KTSSIC
Trigger: ACAGATACTGGAAGTTTTGCATTTATGGTCAACACT...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAACTAAGATTAACACTTTaGCCAAAATTTGGCAGCATA +
Preference number: 2 (lower is better)
Translates to: GYMLDTNDLQALKMSLHELRLTL*PKFGSI
Trigger: TATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAG...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGAACGATCTTCAAGCTTaGAAGATGTCATTGCATGAA +
Preference number: 3 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQNDLQA*KMSLHE
Trigger: TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTT...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACCTGAGCTATAAAATTTaGCAGGAGTACTACCACAGC +
Preference number: 3 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYLSYKI*QEYYHS
Trigger: GCTGTGGTAGTACTCCTGCAAAATTTTATAGCTCAG...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR TCA 72 bp CACGGAGCTTCGAACTTATTCATACCTACATTTAATTaGTCACCACGAATGGGTAGGCAGACGTGTCAGACC +
Preference number: 3 (lower is better)
Translates to: HGASNLFIPTFN*SPRMGRQTCQT
Trigger: GGTCTGACACGTCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAGCTCCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGTCCTGCAATCAACAGTaGAACCTCATTTTATCCAGC +
Preference number: 3 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRSCNQQ*NLILSS
Trigger: GCTGGATAAAATGAGGTTCAACTGTTGATTGCAGGA...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACCCTAAGATTAACACTTaGGCCAAAATTTGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYPKINT*AKIWQH
Trigger: ATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAGG...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR TCA 72 bp GAACTTTTCCCTAGGAGGCCGTTTCCAACTGCCCTATaGCAAACAGCTGATCATCACGTTTATAATGATGGT +
Preference number: 3 (lower is better)
Translates to: ELFPRRPFPTAL*QTADHHVYNDG
Trigger: ACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAGTTGGAAACGGCCTCCTAGGGAAAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGTCCTGCAATCAACAGTaGAACCTCATTTTATCCAGC +
Preference number: 3 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRSCNQQ*NLILSS
Trigger: GCTGGATAAAATGAGGTTCAACTGTTGATTGCAGGA...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTAACTTCCAGTATCTGTaGGGTTTTATTAGCAGATGC +
Preference number: 3 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTNFQYL*GFISRC
Trigger: GCATCTGCTAATAAAACCCAACAGATACTGGAAGTT...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGCTGAGCTATAAAATTTaGCAGGAGTACTACCACAGC +
Preference number: 3 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEELSYKI*QEYYHS
Trigger: GCTGTGGTAGTACTCCTGCAAAATTTTATAGCTCAG...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTTCATTTTACAGTGGTaGAATTTACCCACCCAATGC +
Preference number: 3 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTFILQW*NLPTQC
Trigger: GCATTGGGTGGGTAAATTCAACCACTGTAAAATGAA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTAAATATACTAAGTCTTaGGCTTCTGGTCCCCTCTTT +
Preference number: 3 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIKYTKS*ASGPLF
Trigger: AAAGAGGGGACCAGAAGCCAAAGACTTAGTATATTT...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAAAATATACTAAGTCTTaGGCTTCTGGTCCCCTCTTT +
Preference number: 3 (lower is better)
Translates to: EETHCCKMHALYSYCVIRKYTKS*ASGPLF
Trigger: AAAGAGGGGACCAGAAGCCAAAGACTTAGTATATTT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGCCTAAGATTAACACTTaGGCCAAAATTTGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEPKINT*AKIWQH
Trigger: ATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAGG...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTCCTAAGATTAACACTTaGGCCAAAATTTGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIPKINT*AKIWQH
Trigger: ATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAGG...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACAACTTCCAGTATCTGTaGGGTTTTATTAGCAGATGC +
Preference number: 3 (lower is better)
Translates to: FHSGILSLLARTGLIGSNNFQYL*GFISRC
Trigger: GCATCTGCTAATAAAACCCAACAGATACTGGAAGTT...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTTCATTTTACAGTGGTaGAATTTACCCACCCAATGC +
Preference number: 3 (lower is better)
Translates to: FHSGILSLLARTGLIGSNFILQW*NLPTQC
Trigger: GCATTGGGTGGGTAAATTCAACCACTGTAAAATGAA...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGTGCCCTGTATTCATATaGTGTTATACGATGAACATG +
Preference number: 3 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRCPVFI*CYTMNM
Trigger: CATGTTCATCGTATAACACAATATGAATACAGGGCA...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR TCA 72 bp ATGGAAGACACTGCTCCCGATAATGTGTTAGGATTGTaGCAAAGGTACTGGAAATTTTGCAAAATGGGAATT +
Preference number: 3 (lower is better)
Translates to: MEDTAPDNVLGL*QRYWKFCKMGI
Trigger: AATTCCCATTTTGCAAAATTTCCAGTACCTTTGTCACAATCCTAACACATTATCGGGAGCAGTGTCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR-3UTR CAA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAATCCTGCAATCAACAGTaGAACCTCATTTTATCCAGC +
Preference number: 3 (lower is better)
Translates to: GYMLDTNDLQALKMSLHESCNQQ*NLILSS
Trigger: GCTGGATAAAATGAGGTTCAACTGTTGATTGCAGGA...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR TCA 72 bp AAAATGCATGCCCTGTATTCATATTGTGTTATACGATaGACATGCCACATGCTTTCATTTAAGTACGTGTGC +
Preference number: 3 (lower is better)
Translates to: KMHALYSYCVIR*TCHMLSFKYVC
Trigger: GCACACGTACTTAAATGAAAGCATGTGGCATGTTCATCGTATAACACAATATGAATACAGGGCATGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR GCA 72 bp AATGACACTGAGGTTAACATATTAAGGCCTTATTCCTaGAATCAACAGTTGAACCTCATTTTATCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: NDTEVNILRPYS*NQQLNLILSSR
Trigger: TCTGCTGGATAAAATGAGGTTCAACTGTTGATTGCAGGAATAAGGCCTTAATATGTTAACCTCAGTGTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGGCGGCTCCCTATGGCTaGTGGACAGCACCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQAAPYG*WTAPER
Trigger: CCGCTCCGGTGCTGTCCAGCAGCCATAGGGAGCCGC...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS-3UTR TCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGAAAGCTGGCAGCGTGTaGGAGCCGGAGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQKAGSV*EPEPQK
Trigger: CTTCTGGGGCTCCGGCTCTCACACGCTGCCAGCTTT...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGGCCTACACCGGATTTTaGAGCTCCAGGGCCCCATGC +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQAYTGF*SSRAPC
Trigger: GCATGGGGCCCTGGAGCTGCAAAATCCGGTGTAGGC...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGAGCGACCTCTGCAGCTaGTCGTGCCACTTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQSDLCS*SCHFVQ
Trigger: TTGAACAAAGTGGCACGAGCAGCTGCAGAGGTCGCT...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGTCAATAGGAGAGCTGTaGCTACACCGGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQSIGEL*LHRILQ
Trigger: CTGCAAAATCCGGTGTAGGCACAGCTCTCCTATTGA...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGTTCTTATCTGGTCAGTaGTCGCTTCTTAGCAACCCC +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQFLSGQ*SLLSNP
Trigger: GGGGTTGCTAAGAAGCGAGCACTGACCAGATAAGAA...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGTTTCTGCAGCAGCTCTaGAGATTGTCTGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQFLQQL*RLSGQV
Trigger: TACCTGTCCAGACAATCTCCAGAGCTGCTGCAGAAA...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGGTTTCTCAACTTTGCTaGCCCAGTTGCTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQVSQLC*PSCCPD
Trigger: ATCAGGACAGCAACTGGGCCAGCAAAGTTGAGAAAC...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGGAAGAGACTCACTGCTaGAAAATGCATGCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQEETHC*KMHALY
Trigger: ATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGAATGCTGATCTAGCTTaGTCCATCATTCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQNADLA*SIILNC
Trigger: GCAGTTCAGAATGATGGATCAAGCTAGATCAGCATT...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAGCCAGCCCCGCAGGATaGAGGGAGGACACGAGGGTC +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRASPAG*REDTRV
Trigger: GACCCTCGTGTCCTCCCTTCATCCTGCGGGGCTGGC...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS-3UTR GCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGCTTTGCTGGCCCAGTTaGTGTCCTGATATAGAAATT +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQLCWPS*CPDIEI
Trigger: AATTTCTATATCAGGACAGCAACTGGGCCAGCAAAG...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACCTGACCAGCGACCTCTaGAGCTGCTCGTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYLTSDL*SCSCHF
Trigger: AAAGTGGCACGAGCAGCTGCAGAGGTCGCTGGTCAG...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGTGGCTCCTCCCTCACTaGAGACTCGGTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRWLLPH*RLGSCQ
Trigger: CTGGCAGGAACCGAGTCTCCAGTGAGGGAGGAGCCA...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGCTCCCTATGGCTGCTaGACAGCACCGGAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIAPYGC*TAPERP
Trigger: CGGCCGCTCCGGTGCTGTCCAGCAGCCATAGGGAGC...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS-3UTR TCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGCAAGTTAGAGAATGCTaGTCTAGCTTGATCCATCAT +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQQVREC*SSLIHH
Trigger: ATGATGGATCAAGCTAGATCAGCATTCTCTAACTTG...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACTTATCGCCATCTACTTaGCGAGCCAGGCTGAACCGG +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYLSPST*RARLNR
Trigger: CCGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAA...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR GCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGATTTGCAACCTTTTCTaGAAAGGTGATTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQICNLF*KGDFPC
Trigger: GCAGGGAAAATCACCTTTGCAGAAAAGGTTGCAAAT...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGACCACACAGAAGAACCTaGAGCCGCTCGAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRPHRRT*SRSRRR
Trigger: GCGGCGCCTCGAGCGGCTGCAGGTTCTTCTGTGTGG...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS-3UTR CCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGTCCACTACACCTTTTTaGTTTTGTGACATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQSTTPF*FCDIGL
Trigger: AAGGCCAATGTCACAAAACCAAAAAGGTGTAGTGGA...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR CCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGAGGGAAGTCCTCTCCTaGCTCCTCCCTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRREVLS*LLPHWR
Trigger: TCTCCAGTGAGGGAGGAGCCAGGAGAGGACTTCCCT...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTCCGTGCGGCTCCCTATaGCTGCTGGACAGCACCGGA +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIPCGSL*LLDSTG
Trigger: TCCGGTGCTGTCCAGCAGCCATAGGGAGCCGCACGG...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS-3UTR TCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGAAAGCTGGCAGCGTGTaGGAGCCGGAGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEKAGSV*EPEPQK
Trigger: CTTCTGGGGCTCCGGCTCTCACACGCTGCCAGCTTT...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACAAAGCTGGCAGCGTGTaGGAGCCGGAGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNKAGSV*EPEPQK
Trigger: CTTCTGGGGCTCCGGCTCTCACACGCTGCCAGCTTT...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGACACCTTGGATAAACTaGGCTATAAAATTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQTPWIN*AIKFCR
Trigger: CCTGCAAAATTTTATAGCTCAGTTTATCCAAGGTGT...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGAGATTAAAGAGACTGTaGGTAGTGACACATTCAAGT +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQRLKRL*VVTHSS
Trigger: ACTTGAATGTGTCACTACTCACAGTCTCTTTAATCT...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGAGGGAAGTCCTCTCCTaGCTCCTCCCTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRREVLS*LLPHWR
Trigger: TCTCCAGTGAGGGAGGAGCCAGGAGAGGACTTCCCT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCCCTCTAGCCATTCAGTaGCACCAACCGATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSPLAIQ*HQPIQS
Trigger: ACTTTGGATCGGTTGGTGCCACTGAATGGCTAGAGG...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGTGGAGACTCGGTTCCTaGCAGTCTCTCACACTCAGT +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRWRLGS*QSLTLS
Trigger: ACTGAGTGTGAGAGACTGGCAGGAACCGAGTCTCCA...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTGGCTCCTCCCTCACTaGAGACTCGGTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIWLLPH*RLGSCQ
Trigger: CTGGCAGGAACCGAGTCTCCAGTGAGGGAGGAGCCA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCGTTTCTCAACTTTGCTaGCCCAGTTGCTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSVSQLC*PSCCPD
Trigger: ATCAGGACAGCAACTGGGCCAGCAAAGTTGAGAAAC...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGACCAAGATGATGGGATaGAATTTTAACATCAGGTTT +
Preference number: 4 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQTKMMG*NFNIRF
Trigger: AAACCTGATGTTAAAATTCCATCCCATCATCTTGGT...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCATTGATCACCACGAATaGGTAGGCAGACGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSIDHHE*VGRRVR
Trigger: TCTGACACGTCTGCCTACCCATTCGTGGTGATCAAT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TTCAACATACAACGCAAGATTTTCATCTTTTTGAGATCCAGCCTCACGAGGGACCTTGCCGAGCCAGGCTaGACCGGGTATATGACAATG +
Preference number: 4 (lower is better)
Translates to: FNIQRKIFIFLRSSLTRDLAEPG*TGYMTM
Trigger: CATTGTCATATACCCGGTTCAGCCTGGCTCGGCAAG...GTCCCTCGTGAGGCTGGATCTCAAAAAGATGAAAATCTTGCGTTGTATGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR TCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCAGATTTTCATCTTTTTaGGATCCAGCCTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSRFSSF*DPASRG
Trigger: CCCTCGTGAGGCTGGATCTCAAAAAGATGAAAATCT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCCGTTCTTATCAACTATaGTCACCGAGTTTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSRSYQL*SPSFER
Trigger: GCGCTCAAAACTCGGTGATCATAGTTGATAAGAACG...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACGCCCAGTTGCTGTCCTaGTATAGAAATTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYAQLLS*YRNCPV
Trigger: TACTGGGCAATTTCTATATCAGGACAGCAACTGGGC...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACGCATTTGCAGCTCCCTaGATAGTCCAAGTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYAFAAP*IVQVAR
Trigger: TCTAGCTACTTGGACTATTCAGGGAGCTGCAAATGC...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGAGCCTACACCGGATTTTaGAGCTCCAGGGCCCCATGC +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRAYTGF*SSRAPC
Trigger: GCATGGGGCCCTGGAGCTGCAAAATCCGGTGTAGGC...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGACCAGAGAGGGCATTTaGAGCTCCCTGAATAGTCCA +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRTREGI*SSLNSP
Trigger: TGGACTATTCAGGGAGCTGCAAATGCCCTCTCTGGT...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCTCATTTAAGTACGTGTaGGTAACACCCGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSSFKYV*VTPEPG
Trigger: TCCTGGTTCGGGTGTTACGCACACGTACTTAAATGA...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCACCCTGCTGTTCTCATaGAAGCTATGGGTATCACAT +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSTLLFS*KLWVSH
Trigger: ATGTGATACCCATAGCTTCCATGAGAACAGCAGGGT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGGGCTGGCAGAAACCTTaGAGTTGCTGGTACCAAGAA +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRGWQKP*SCWYQE
Trigger: TTCTTGGTACCAGCAACTTCAAGGTTTCTGCCAGCC...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGAGTTTAATCACGAACTaGCCAGCGACCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRSLITN*PATSAA
Trigger: AGCTGCAGAGGTCGCTGGTCAGTTCGTGATTAAACT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACTTTCCAACTGCCCTATaGCAAACAGCTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYFPTAL*QTADHH
Trigger: GTGATGATCAGCTGTTTGTCATAGGGCAGTTGGAAA...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTTTATCGCCATCTACTTaGCGAGCCAGGCTGAACCGG +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPLSPST*RARLNR
Trigger: CCGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAA...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR GCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACTGACCAGCGACCTCTaGAGCTGCTCGTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSLTSDL*SCSCHF
Trigger: AAAGTGGCACGAGCAGCTGCAGAGGTCGCTGGTCAG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAATGGCTCCTCCCTCACTaGAGACTCGGTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEWLLPH*RLGSCQ
Trigger: CTGGCAGGAACCGAGTCTCCAGTGAGGGAGGAGCCA...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCGGCTTAGATCTCATTTaGAGAAGGTCTTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSGLDLI*RRSFNL
Trigger: CAGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCC...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCCATTTCAGACCTCATTaGCAAGAAAACAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSHFRPH*QENKPI
Trigger: GATGGGCTTGTTTTCTTGCCAATGAGGTCTGAAATG...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGGCTGAACCGGGTATATaGCAATGGTTCTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRAEPGI*QWFSTK
Trigger: TTTGGTGGAGAACCATTGTCATATACCCGGTTCAGC...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR TCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACTTGCCGAGCCAGGCTaGACCGGGTATATGACAATG +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSLAEPG*TGYMTM
Trigger: CATTGTCATATACCCGGTTCAGCCTGGCTCGGCAAG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR TCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGGCACATTGCTCACAGTaGGCTTCACATTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRAHCSQ*ASHSCF
Trigger: AAAGCAAGAATGTGAAGCTCACTGTGAGCAATGTGC...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAGCCTACACCGGATTTTaGAGCTCCAGGGCCCCATGC +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEAYTGF*SSRAPC
Trigger: GCATGGGGCCCTGGAGCTGCAAAATCCGGTGTAGGC...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGTGGGATTCCAGAATATaGAAGGAAAGGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRWDSRI*KERESS
Trigger: GCTGCTTTCCCTTTCCTTGCATATTCTGGAATCCCA...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGCTCTGCAGCTGCTCGTaGCACTTTGTTCAACTCAGG +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEELCSCS*HFVQLR
Trigger: CCTGAGTTGAACAAAGTGGCACGAGCAGCTGCAGAG...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACAGCGACCTCTGCAGCTaGTCGTGCCACTTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNSDLCS*SCHFVQ
Trigger: TTGAACAAAGTGGCACGAGCAGCTGCAGAGGTCGCT...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAAGCGACCTCTGCAGCTaGTCGTGCCACTTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRSDLCS*SCHFVQ
Trigger: TTGAACAAAGTGGCACGAGCAGCTGCAGAGGTCGCT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTTCTTATCTGGTCAGTaGTCGCTTCTTAGCAACCCC +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRFLSGQ*SLLSNP
Trigger: GGGGTTGCTAAGAAGCGAGCACTGACCAGATAAGAA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGAAGCGTATACAACAGTaGGCTGGCAGAAACCTTGAA +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRKRIQQ*AGRNLE
Trigger: TTCAAGGTTTCTGCCAGCCCACTGTTGTATACGCTT...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCACAGAAAGAAACTGCTaGGATTCCAGAATATGCAAG +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSTERNC*DSRICK
Trigger: CTTGCATATTCTGGAATCCCAGCAGTTTCTTTCTGT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACCCTTATAGGTGTCCATaGTGGTACCCAAATAAGGAT +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYPYRCP*WYPNKD
Trigger: ATCCTTATTTGGGTACCACCATGGACACCTATAAGG...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAACTTGCCGAGCCAGGCTaGACCGGGTATATGACAATG +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNELAEPG*TGYMTM
Trigger: CATTGTCATATACCCGGTTCAGCCTGGCTCGGCAAG...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR TCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCACCTTTTTGGTTTTGTaGCATTGGCCTTTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSTFLVL*HWPLCY
Trigger: ATAACACAAAGGCCAATGTCACAAAACCAAAAAGGT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR TCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTGGCTGGCAGAAACCTTaGAGTTGCTGGTACCAAGAA +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPGWQKP*SCWYQE
Trigger: TTCTTGGTACCAGCAACTTCAAGGTTTCTGCCAGCC...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTAGTTTAATCACGAACTaGCCAGCGACCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPSLITN*PATSAA
Trigger: AGCTGCAGAGGTCGCTGGTCAGTTCGTGATTAAACT...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTGCATTTGCAGCTCCCTaGATAGTCCAAGTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTAFAAP*IVQVAR
Trigger: TCTAGCTACTTGGACTATTCAGGGAGCTGCAAATGC...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCCTAGTAGTACCAAGATaGTGGGATGGAATTTTAACA +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSLVVPR*WDGILT
Trigger: TGTTAAAATTCCATCCCATCATCTTGGTACTACTAG...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGCCTGCAATCAACAGTTaGACCTCATTTTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRPAINS*TSFYPA
Trigger: TGCTGGATAAAATGAGGTTCAACTGTTGATTGCAGG...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACACGATCTTCAAGCTTTaGAGATGTCATTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYTIFKL*RCHCMK
Trigger: CTTCATGCAATGACATCTTCAAAGCTTGAAGATCGT...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGGTGACACTAAGAACCTaGAGAGACCCTATGAACTTT +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRVTLRT*RDPMNF
Trigger: AAAGTTCATAGGGTCTCTTCAGGTTCTTAGTGTCAC...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCAGATTAAAGAGACTGTaGGTAGTGACACATTCAAGT +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSRLKRL*VVTHSS
Trigger: ACTTGAATGTGTCACTACTCACAGTCTCTTTAATCT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GACCTGAATCTTAACAAAATGTTGATCACGCCAGACTTTGCTGAGTTTAAATTCTTATCGCCATCTACTTaGCGAGCCAGGCTGAACCGG +
Preference number: 4 (lower is better)
Translates to: DLNLNKMLITPDFAEFKFLSPST*RARLNR
Trigger: CCGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAA...GAATTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGATTCAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTCCCAAACAGCTTTTCTaGAGCAGCTCTGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTPKQLF*SSSGDC
Trigger: ACAATCTCCAGAGCTGCTGCAGAAAAGCTGTTTGGG...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTCAATAGGAGAGCTGTaGCTACACCGGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTSIGEL*LHRILQ
Trigger: CTGCAAAATCCGGTGTAGGCACAGCTCTCCTATTGA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGACTCTGCAGCTGCTCGTaGCACTTTGTTCAACTCAGG +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRLCSCS*HFVQLR
Trigger: CCTGAGTTGAACAAAGTGGCACGAGCAGCTGCAGAG...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTACCAGAGAGGGCATTTaGAGCTCCCTGAATAGTCCA +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHITREGI*SSLNSP
Trigger: TGGACTATTCAGGGAGCTGCAAATGCCCTCTCTGGT...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTCCATCATTCTGAACTaGCACACAGAAGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRSIILN*HTEEPA
Trigger: TGCAGGTTCTTCTGTGTGGCAGTTCAGAATGATGGA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS-3UTR CCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAAGGGAAGTCCTCTCCTaGCTCCTCCCTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEREVLS*LLPHWR
Trigger: TCTCCAGTGAGGGAGGAGCCAGGAGAGGACTTCCCT...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCGTACCAAAATTAGCATaGACCAGTTTACCAGTAACT +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSVPKLA*TSLPVT
Trigger: AGTTACTGGTAAACTGGTCCATGCTAATTTTGGTAC...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGCCTCTAGCCATTCAGTaGCACCAACCGATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEPLAIQ*HQPIQS
Trigger: ACTTTGGATCGGTTGGTGCCACTGAATGGCTAGAGG...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCTATAGGTGTCCATGGTaGTACCCAAATAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSYRCPW*YPNKDN
Trigger: ATTATCCTTATTTGGGTACCACCATGGACACCTATA...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACATGTCTGCTCTGTATTaGTTCAGATCCCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYMSALY*FRSLTN
Trigger: ATTTGTGAGGGATCTGAACCAATACAGAGCAGACAT...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGGAAAGGAGACTCTTTTaGAGATACGTAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRERRLF*RYVGRE
Trigger: CTCTCTCCCTACGTATCTCCAAAAGAGTCTCCTTTC...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGACCCTGCTGTTCTCATaGAAGCTATGGGTATCACAT +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRTLLFS*KLWVSH
Trigger: ATGTGATACCCATAGCTTCCATGAGAACAGCAGGGT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TTCAACATACAACGCAAGATTTTCATCTTTTTGAGATCCAGCCTCACGAGGGACCTTGATCCATCATTCTaGACTGCCACACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FNIQRKIFIFLRSSLTRDLDPSF*TATQKN
Trigger: GTTCTTCTGTGTGGCAGTTCAGAATGATGGATCAAG...GTCCCTCGTGAGGCTGGATCTCAAAAAGATGAAAATCTTGCGTTGTATGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR TCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGCAAGTTAGAGAATGCTaGTCTAGCTTGATCCATCAT +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRQVREC*SSLIHH
Trigger: ATGATGGATCAAGCTAGATCAGCATTCTCTAACTTG...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGCTGAACCGGGTATATaGCAATGGTTCTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIAEPGI*QWFSTK
Trigger: TTTGGTGGAGAACCATTGTCATATACCCGGTTCAGC...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR TCA 90 bp AAGTCTACCGTTCTTATCAACTATGATCACCGAGTTTTGAGCGCTGTCTTTGACAGATTTTCATCTTTTTaGGATCCAGCCTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: KSTVLINYDHRVLSAVFDRFSSF*DPASRG
Trigger: CCCTCGTGAGGCTGGATCTCAAAAAGATGAAAATCT...GTCAAAGACAGCGCTCAAAACTCGGTGATCATAGTTGATAAGAACGGTAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR TCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACAGCATGTCCAAAGAATaGAAGTTCTGCGTTAACAAT +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYSMSKE*KFCVNN
Trigger: ATTGTTAACGCAGAACTTTCATTCTTTGGACATGCT...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCAGGCTGGCAGAAACCTTaGAGTTGCTGGTACCAAGAA +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSGWQKP*SCWYQE
Trigger: TTCTTGGTACCAGCAACTTCAAGGTTTCTGCCAGCC...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGGCCCAGTTGCTGTCCTaGTATAGAAATTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRAQLLS*YRNCPV
Trigger: TACTGGGCAATTTCTATATCAGGACAGCAACTGGGC...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGGCCCAGTTGCTGTCCTaGTATAGAAATTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEAQLLS*YRNCPV
Trigger: TACTGGGCAATTTCTATATCAGGACAGCAACTGGGC...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGCAGCATTGTCTAAAGTaGGTTTCTCAACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRQHCLK*VSQLCW
Trigger: CCAGCAAAGTTGAGAAACTCACTTTAGACAATGCTG...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTGCATTTGCAGCTCCCTaGATAGTCCAAGTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPAFAAP*IVQVAR
Trigger: TCTAGCTACTTGGACTATTCAGGGAGCTGCAAATGC...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGTCATTTTACAGTGGTTaGATTTACCCACCCAATGCT +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRSFYSG*IYPPNA
Trigger: AGCATTGGGTGGGTAAATTCAACCACTGTAAAATGA...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAATGGAGACTCGGTTCCTaGCAGTCTCTCACACTCAGT +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEWRLGS*QSLTLS
Trigger: ACTGAGTGTGAGAGACTGGCAGGAACCGAGTCTCCA...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTTTACCAGTAACTGTTaGAGCCTTACTATACGCCAC +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRFTSNC*SLTIRH
Trigger: GTGGCGTATAGTAAGGCTGCAACAGTTACTGGTAAA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGATTTGCAACCTTTTCTaGAAAGGTGATTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRICNLF*KGDFPC
Trigger: GCAGGGAAAATCACCTTTGCAGAAAAGGTTGCAAAT...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTCCCAAACAGCTTTTCTaGAGCAGCTCTGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPPKQLF*SSSGDC
Trigger: ACAATCTCCAGAGCTGCTGCAGAAAAGCTGTTTGGG...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTCAATAGGAGAGCTGTaGCTACACCGGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHISIGEL*LHRILQ
Trigger: CTGCAAAATCCGGTGTAGGCACAGCTCTCCTATTGA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCAACCAGAGAGGGCATTTaGAGCTCCCTGAATAGTCCA +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSTREGI*SSLNSP
Trigger: TGGACTATTCAGGGAGCTGCAAATGCCCTCTCTGGT...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCAGTGTTGACCATAAATaGAAAACTTCCAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSSVDHK*KTSSIC
Trigger: ACAGATACTGGAAGTTTTGCATTTATGGTCAACACT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCAATTTACCCACCCAATaGTTAATGACCACAAAATGT +
Preference number: 4 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSNLPTQ*LMTTKC
Trigger: ACATTTTGTGGTCATTAAGCATTGGGTGGGTAAATT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACGATGAACATGCCACATaGTTTCATTTAAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYDEHAT*FHLSTC
Trigger: ACACGTACTTAAATGAAAGCATGTGGCATGTTCATC...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGTTTCTGCAGCAGCTCTaGAGATTGTCTGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEFLQQL*RLSGQV
Trigger: TACCTGTCCAGACAATCTCCAGAGCTGCTGCAGAAA...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACCTCTAGCCATTCAGTaGCACCAACCGATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSPLAIQ*HQPIQS
Trigger: ACTTTGGATCGGTTGGTGCCACTGAATGGCTAGAGG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTGTTTCTCAACTTTGCTaGCCCAGTTGCTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPVSQLC*PSCCPD
Trigger: ATCAGGACAGCAACTGGGCCAGCAAAGTTGAGAAAC...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTGTAGCTAGAGCCAACTaGTTTCTGAACAGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTVARAN*FLNSVS
Trigger: TGAAACGCTGTTCAGAAACCAGTTGGCTCTAGCTAC...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGGGCTTAGATCTCATTTaGAGAAGGTCTTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRGLDLI*RRSFNL
Trigger: CAGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCC...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACACTTCCAGTATCTGTTaGGTTTTATTAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYTSSIC*VLLADA
Trigger: AGCATCTGCTAATAAAACCCAACAGATACTGGAAGT...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAATTGATCACCACGAATaGGTAGGCAGACGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRIDHHE*VGRRVR
Trigger: TCTGACACGTCTGCCTACCCATTCGTGGTGATCAAT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGATTGATCACCACGAATaGGTAGGCAGACGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRIDHHE*VGRRVR
Trigger: TCTGACACGTCTGCCTACCCATTCGTGGTGATCAAT...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTCTTGATCCATCATTCTaGACTGCCACACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPLDPSF*TATQKN
Trigger: GTTCTTCTGTGTGGCAGTTCAGAATGATGGATCAAG...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGCAAGTTAGAGAATGCTaGTCTAGCTTGATCCATCAT +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRQVREC*SSLIHH
Trigger: ATGATGGATCAAGCTAGATCAGCATTCTCTAACTTG...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTAGATTTTCATCTTTTTaGGATCCAGCCTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPRFSSF*DPASRG
Trigger: CCCTCGTGAGGCTGGATCTCAAAAAGATGAAAATCT...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGATCTTAACAAAATGTTaGTCACGCCAGACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRILTKC*SRQTLL
Trigger: CAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGAT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGCGTTCTTATCAACTATaGTCACCGAGTTTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRRSYQL*SPSFER
Trigger: GCGCTCAAAACTCGGTGATCATAGTTGATAAGAACG...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACCGTTCTTATCAACTATaGTCACCGAGTTTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNRSYQL*SPSFER
Trigger: GCGCTCAAAACTCGGTGATCATAGTTGATAAGAACG...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGGCACATTGCTCACAGTaGGCTTCACATTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEAHCSQ*ASHSCF
Trigger: AAAGCAAGAATGTGAAGCTCACTGTGAGCAATGTGC...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGCAGATCCCTCACAAATaGAAGCAGTTGGCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEQIPHK*KQLAVV
Trigger: TACAACAGCCAACTGCTTTCATTTGTGAGGGATCTG...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGCAGATCCCTCACAAATaGAAGCAGTTGGCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRQIPHK*KQLAVV
Trigger: TACAACAGCCAACTGCTTTCATTTGTGAGGGATCTG...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTCATTTTACAGTGGTTaGATTTACCCACCCAATGCT +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRSFYSG*IYPPNA
Trigger: AGCATTGGGTGGGTAAATTCAACCACTGTAAAATGA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTTTCCAACTGCCCTATaGCAAACAGCTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIFPTAL*QTADHH
Trigger: GTGATGATCAGCTGTTTGTCATAGGGCAGTTGGAAA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGCAGGAATCTCAGCTATaGCCTTTTCACTTAGCTACG +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRQESQL*PFHLAT
Trigger: CGTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTG...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTTTACCAGTAACTGTTaGAGCCTTACTATACGCCAC +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTFTSNC*SLTIRH
Trigger: GTGGCGTATAGTAAGGCTGCAACAGTTACTGGTAAA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACCCAAACAGCTTTTCTaGAGCAGCTCTGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSPKQLF*SSSGDC
Trigger: ACAATCTCCAGAGCTGCTGCAGAAAAGCTGTTTGGG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGAAAGCCTTTAAATaGAGGGACGAAAGGTATCCC +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIVKAFK*RDERYP
Trigger: GGGATACCTTTCGTCCCTGCATTTAAAGGCTTTCAC...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTGGGATTCCAGAATATaGAAGGAAAGGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNWDSRI*KERESS
Trigger: GCTGCTTTCCCTTTCCTTGCATATTCTGGAATCCCA...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTGGGATTCCAGAATATaGAAGGAAAGGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIWDSRI*KERESS
Trigger: GCTGCTTTCCCTTTCCTTGCATATTCTGGAATCCCA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAACTCTGCAGCTGCTCGTaGCACTTTGTTCAACTCAGG +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHELCSCS*HFVQLR
Trigger: CCTGAGTTGAACAAAGTGGCACGAGCAGCTGCAGAG...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACAATTTACCCACCCAATaGTTAATGACCACAAAATGT +
Preference number: 4 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYNLPTQ*LMTTKC
Trigger: ACATTTTGTGGTCATTAAGCATTGGGTGGGTAAATT...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCATTTAAGTACGTGTaGGTAACACCCGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNSFKYV*VTPEPG
Trigger: TCCTGGTTCGGGTGTTACGCACACGTACTTAAATGA...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGGATGAACATGCCACATaGTTTCATTTAAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRDEHAT*FHLSTC
Trigger: ACACGTACTTAAATGAAAGCATGTGGCATGTTCATC...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGCTCACACTCAGTTTTTaGTTCTACCCCTTTACAATA +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRLTLSF*FYPFTI
Trigger: TATTGTAAAGGGGTAGAACCAAAAACTGAGTGTGAG...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTAAGCGTATACAACAGTaGGCTGGCAGAAACCTTGAA +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPKRIQQ*AGRNLE
Trigger: TTCAAGGTTTCTGCCAGCCCACTGTTGTATACGCTT...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTCCTTATAGGTGTCCATaGTGGTACCCAAATAAGGAT +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTPYRCP*WYPNKD
Trigger: ATCCTTATTTGGGTACCACCATGGACACCTATAAGG...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTGAAAGGAGACTCTTTTaGAGATACGTAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPERRLF*RYVGRE
Trigger: CTCTCTCCCTACGTATCTCCAAAAGAGTCTCCTTTC...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAGAAAGGAGACTCTTTTaGAGATACGTAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRERRLF*RYVGRE
Trigger: CTCTCTCCCTACGTATCTCCAAAAGAGTCTCCTTTC...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTAGCTAGAGCCAACTaGTTTCTGAACAGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIVARAN*FLNSVS
Trigger: TGAAACGCTGTTCAGAAACCAGTTGGCTCTAGCTAC...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGGTAGCTAGAGCCAACTaGTTTCTGAACAGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRVARAN*FLNSVS
Trigger: TGAAACGCTGTTCAGAAACCAGTTGGCTCTAGCTAC...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGTCAAAAGGTCAATTCTaGATTAAAACTTGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRSKGQF*IKTCPH
Trigger: GTGCGGACAAGTTTTAATCCAGAATTGACCTTTTGA...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR CAA 72 bp CATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTaGATAGGAAGTAACTCAACCCTAACTGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: HSGILSLLARTG*IGSNSTLTVEK
Trigger: CTTTTCTACAGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR CAA 72 bp GAGCTTGTCACTAGTCTGATATTTCATTCAGGAATATaGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ELVTSLIFHSGI*SLLARTGLIGS
Trigger: ACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGACTAGTGACAAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGACTTGATCCATCATTCTaGACTGCCACACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRLDPSF*TATQKN
Trigger: GTTCTTCTGTGTGGCAGTTCAGAATGATGGATCAAG...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACTTGATCCATCATTCTaGACTGCCACACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSLDPSF*TATQKN
Trigger: GTTCTTCTGTGTGGCAGTTCAGAATGATGGATCAAG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GACCTGAATCTTAACAAAATGTTGATCACGCCAGACTTTGCTGAGTTTAAATTCGCTGAACCGGGTATATaGCAATGGTTCTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: DLNLNKMLITPDFAEFKFAEPGI*QWFSTK
Trigger: TTTGGTGGAGAACCATTGTCATATACCCGGTTCAGC...GAATTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGATTCAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR TCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACAGTTTCATCTCCACATaGCTGTTATCGCCATCTACT +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNSFIST*LLSPST
Trigger: AGTAGATGGCGATAACAGTCATGTGGAGATGAAACT...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR TCA 90 bp TTCAACATACAACGCAAGATTTTCATCTTTTTGAGATCCAGCCTCACGAGGGACATCTTAACAAAATGTTaGTCACGCCAGACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FNIQRKIFIFLRSSLTRDILTKC*SRQTLL
Trigger: CAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGAT...GTCCCTCGTGAGGCTGGATCTCAAAAAGATGAAAATCTTGCGTTGTATGTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR TCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGCACATTCTTGCTTTCTaGGGTTACCATCCTACATGT +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEHILAF*GYHPTC
Trigger: ACATGTAGGATGGTAACCTCAGAAAGCAAGAATGTG...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTCACATTCTTGCTTTCTaGGGTTACCATCCTACATGT +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIHILAF*GYHPTC
Trigger: ACATGTAGGATGGTAACCTCAGAAAGCAAGAATGTG...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGCAGCATTGTCTAAAGTaGGTTTCTCAACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRQHCLK*VSQLCW
Trigger: CCAGCAAAGTTGAGAAACTCACTTTAGACAATGCTG...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAAGTTTAATCACGAACTaGCCAGCGACCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHESLITN*PATSAA
Trigger: AGCTGCAGAGGTCGCTGGTCAGTTCGTGATTAAACT...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGATGTTTCTTTCAGGAATaGGGAAACCAGCTACATTCC +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRCFFQE*GNQLHS
Trigger: GGAATGTAGCTGGTTTCCTCATTCCTGAAAGAAACA...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGACACCTTGGATAAACTaGGCTATAAAATTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRTPWIN*AIKFCR
Trigger: CCTGCAAAATTTTATAGCTCAGTTTATCCAAGGTGT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGACAGGAATCTCAGCTATaGCCTTTTCACTTAGCTACG +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRQESQL*PFHLAT
Trigger: CGTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTG...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCAGTGAAAGCCTTTAAATaGAGGGACGAAAGGTATCCC +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSVKAFK*RDERYP
Trigger: GGGATACCTTTCGTCCCTGCATTTAAAGGCTTTCAC...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACCTTTGCTGGCCCAGTTaGTGTCCTGATATAGAAATT +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNLCWPS*CPDIEI
Trigger: AATTTCTATATCAGGACAGCAACTGGGCCAGCAAAG...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGAAAACAGAAAGAAACTaGTGGGATTCCAGAATATGC +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRKTERN*WDSRIC
Trigger: GCATATTCTGGAATCCCAGCAGTTTCTTTCTGTTTT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTTAAGGCCTTATTCCTaGAATCAACAGTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTLRPYS*NQQLNL
Trigger: GAGGTTCAACTGTTGATTGCAGGAATAAGGCCTTAA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTCTGCTGCAAAATGCATaGCCTGTATTCATATTGTGT +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTLLQNA*PVFILC
Trigger: ACACAATATGAATACAGGGCATGCATTTTGCAGCAG...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCAGAAGAGACTCACTGCTaGAAAATGCATGCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSEETHC*KMHALY
Trigger: ATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGGCTCTGGAGATTGTCTaGACAGGTATATTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRALEIV*TGILGN
Trigger: ATTGCCTAATATACCTGTCCAGACAATCTCCAGAGC...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAGCTCTGGAGATTGTCTaGACAGGTATATTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRALEIV*TGILGN
Trigger: ATTGCCTAATATACCTGTCCAGACAATCTCCAGAGC...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAATTTCTGCAGCAGCTCTaGAGATTGTCTGGACAGGTA +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEFLQQL*RLSGQV
Trigger: TACCTGTCCAGACAATCTCCAGAGCTGCTGCAGAAA...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGAACCCTGCTGTTCTCATaGAAGCTATGGGTATCACAT +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRTLLFS*KLWVSH
Trigger: ATGTGATACCCATAGCTTCCATGAGAACAGCAGGGT...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGGCTTAGATCTCATTTaGAGAAGGTCTTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIGLDLI*RRSFNL
Trigger: CAGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCC...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGCATTTCAGACCTCATTaGCAAGAAAACAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRHFRPH*QENKPI
Trigger: GATGGGCTTGTTTTCTTGCCAATGAGGTCTGAAATG...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGGTTCTTTATACATTATaGAAGACACTGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRVLYTL*KTLLPI
Trigger: TATCGGGAGCAGTGTCTTCCATAATGTATAAAGAAC...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AACAAGTCTACCGTTCTTATCAACTATGATCACCGAGTTTTGAGCGCTGTCTTTCAAGTTAGAGAATGCTaGTCTAGCTTGATCCATCAT +
Preference number: 4 (lower is better)
Translates to: NKSTVLINYDHRVLSAVFQVREC*SSLIHH
Trigger: ATGATGGATCAAGCTAGATCAGCATTCTCTAACTTG...AAAGACAGCGCTCAAAACTCGGTGATCATAGTTGATAAGAACGGTAGACTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR TCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAAGATTTTCATCTTTTTaGGATCCAGCCTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNERFSSF*DPASRG
Trigger: CCCTCGTGAGGCTGGATCTCAAAAAGATGAAAATCT...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGATCTTAACAAAATGTTaGTCACGCCAGACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRILTKC*SRQTLL
Trigger: CAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGAT...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTATCTTAACAAAATGTTaGTCACGCCAGACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPILTKC*SRQTLL
Trigger: CAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGAT...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTAGCATGTCCAAAGAATaGAAGTTCTGCGTTAACAAT +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTSMSKE*KFCVNN
Trigger: ATTGTTAACGCAGAACTTTCATTCTTTGGACATGCT...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGACACATTCTTGCTTTCTaGGGTTACCATCCTACATGT +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRHILAF*GYHPTC
Trigger: ACATGTAGGATGGTAACCTCAGAAAGCAAGAATGTG...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGCACATTGCTCACAGTaGGCTTCACATTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEAHCSQ*ASHSCF
Trigger: AAAGCAAGAATGTGAAGCTCACTGTGAGCAATGTGC...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAACAGATCCCTCACAAATaGAAGCAGTTGGCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEQIPHK*KQLAVV
Trigger: TACAACAGCCAACTGCTTTCATTTGTGAGGGATCTG...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTCTAGTAGTACCAAGATaGTGGGATGGAATTTTAACA +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTLVVPR*WDGILT
Trigger: TGTTAAAATTCCATCCCATCATCTTGGTACTACTAG...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGATGTTTCTTTCAGGAATaGGGAAACCAGCTACATTCC +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRCFFQE*GNQLHS
Trigger: GGAATGTAGCTGGTTTCCTCATTCCTGAAAGAAACA...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACCTGCAATCAACAGTTaGACCTCATTTTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSPAINS*TSFYPA
Trigger: TGCTGGATAAAATGAGGTTCAACTGTTGATTGCAGG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGATCAATTACATTTGGCTaGCGGCTGTTTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRSITFG*RLFSKT
Trigger: GGTTTTAGAAAACAGCCGTCAGCCAAATGTAATTGA...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTTCAATTACATTTGGCTaGCGGCTGTTTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPSITFG*RLFSKT
Trigger: GGTTTTAGAAAACAGCCGTCAGCCAAATGTAATTGA...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTACGATCTTCAAGCTTTaGAGATGTCATTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPTIFKL*RCHCMK
Trigger: CTTCATGCAATGACATCTTCAAAGCTTGAAGATCGT...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTATACCTACATTTAATTaGTCACCACGAATGGGTAGG +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIIPTFN*SPRMGR
Trigger: CCTACCCATTCGTGGTGATCAATTAAATGTAGGTAT...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAATTTCCAACTGCCCTATaGCAAACAGCTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEFPTAL*QTADHH
Trigger: GTGATGATCAGCTGTTTGTCATAGGGCAGTTGGAAA...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCAGTGACACTAAGAACCTaGAGAGACCCTATGAACTTT +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSVTLRT*RDPMNF
Trigger: AAAGTTCATAGGGTCTCTTCAGGTTCTTAGTGTCAC...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGATTTACCAGTAACTGTTaGAGCCTTACTATACGCCAC +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRFTSNC*SLTIRH
Trigger: GTGGCGTATAGTAAGGCTGCAACAGTTACTGGTAAA...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAATTTGCAACCTTTTCTaGAAAGGTGATTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRICNLF*KGDFPC
Trigger: GCAGGGAAAATCACCTTTGCAGAAAAGGTTGCAAAT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACTTTGCTGGCCCAGTTaGTGTCCTGATATAGAAATT +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSLCWPS*CPDIEI
Trigger: AATTTCTATATCAGGACAGCAACTGGGCCAGCAAAG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGTTAAGGCCTTATTCCTaGAATCAACAGTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRLRPYS*NQQLNL
Trigger: GAGGTTCAACTGTTGATTGCAGGAATAAGGCCTTAA...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTATACAAAGTCCCTCTaGTTTAAGTCAAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRYTKSL*FKSKGQ
Trigger: TTGACCTTTTGACTTAAAGCAGAGGGACTTTGTATA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGCTGCTGCAAAATGCATaGCCTGTATTCATATTGTGT +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEELLQNA*PVFILC
Trigger: ACACAATATGAATACAGGGCATGCATTTTGCAGCAG...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACCTCACTGCTGCAAAATaGATGCCCTGTATTCATATT +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNLTAAK*MPCIHI
Trigger: AATATGAATACAGGGCATGCATTTTGCAGCAGTGAG...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTTCCACTACACCTTTTTaGTTTTGTGACATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPSTTPF*FCDIGL
Trigger: AAGGCCAATGTCACAAAACCAAAAAGGTGTAGTGGA...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR CCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTATATCTGAGAACATCTaGGCAAGTTTCAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTISENI*ASFNRR
Trigger: TCTCCTATTGAAACTTGCCCAGATGTTCTCAGATAT...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAAAGCGTATACAACAGTaGGCTGGCAGAAACCTTGAA +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEKRIQQ*AGRNLE
Trigger: TTCAAGGTTTCTGCCAGCCCACTGTTGTATACGCTT...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACCTTATAGGTGTCCATaGTGGTACCCAAATAAGGAT +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSPYRCP*WYPNKD
Trigger: ATCCTTATTTGGGTACCACCATGGACACCTATAAGG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTGAAGGTCTTTCAACCTaGTATCTCCTATTTAGCATC +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPEGLST*YLLFSI
Trigger: GATGCTAAATAGGAGATACCAGGTTGAAAGACCTTC...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGAAGGTCTTTCAACCTaGTATCTCCTATTTAGCATC +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIEGLST*YLLFSI
Trigger: GATGCTAAATAGGAGATACCAGGTTGAAAGACCTTC...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
3UTR CAA 72 bp GACTCACTGCTGCAAAATGCATGCCCTGTATTCATATaGTGTTATACGATGAACATGCCACATGCTTTCATT +
Preference number: 4 (lower is better)
Translates to: DSLLQNACPVFI*CYTMNMPHAFI
Trigger: AATGAAAGCATGTGGCATGTTCATCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAAGTTTCATCTCCACATaGCTGTTATCGCCATCTACT +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNESFIST*LLSPST
Trigger: AGTAGATGGCGATAACAGTCATGTGGAGATGAAACT...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR TCA 90 bp CTTAACAAAATGTTGATCACGCCAGACTTTGCTGAGTTTAAATTCACGAAATTGCGTTCTTATCAACTATaGTCACCGAGTTTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: LNKMLITPDFAEFKFTKLRSYQL*SPSFER
Trigger: GCGCTCAAAACTCGGTGATCATAGTTGATAAGAACG...CAATTTCGTGAATTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR TCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACAGCATGTCCAAAGAATaGAAGTTCTGCGTTAACAAT +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNSMSKE*KFCVNN
Trigger: ATTGTTAACGCAGAACTTTCATTCTTTGGACATGCT...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAACAGCATTGTCTAAAGTaGGTTTCTCAACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEQHCLK*VSQLCW
Trigger: CCAGCAAAGTTGAGAAACTCACTTTAGACAATGCTG...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGATCAATTACATTTGGCTaGCGGCTGTTTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRSITFG*RLFSKT
Trigger: GGTTTTAGAAAACAGCCGTCAGCCAAATGTAATTGA...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAACACCTTGGATAAACTaGGCTATAAAATTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRTPWIN*AIKFCR
Trigger: CCTGCAAAATTTTATAGCTCAGTTTATCCAAGGTGT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGAATACCTACATTTAATTaGTCACCACGAATGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRIPTFN*SPRMGR
Trigger: CCTACCCATTCGTGGTGATCAATTAAATGTAGGTAT...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGAGATTAAAGAGACTGTaGGTAGTGACACATTCAAGT +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEERLKRL*VVTHSS
Trigger: ACTTGAATGTGTCACTACTCACAGTCTCTTTAATCT...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTTATTGTGTTATACGATaGACATGCCACATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPYCVIR*TCHMLS
Trigger: TGAAAGCATGTGGCATGTTCATCGTATAACACAATA...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTATTGTGTTATACGATaGACATGCCACATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIYCVIR*TCHMLS
Trigger: TGAAAGCATGTGGCATGTTCATCGTATAACACAATA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACAAAACAGAAAGAAACTaGTGGGATTCCAGAATATGC +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNKTERN*WDSRIC
Trigger: GCATATTCTGGAATCCCAGCAGTTTCTTTCTGTTTT...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTGTATTAAAAGCTGCTaGCTAAAGACATCTAGTAGT +
Preference number: 4 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTCIKSC*LKTSSS
Trigger: ACTACTAGATGTCTTTAGGCAGCAGCTTTTAATACA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGACTGCTGCAAAATGCATaGCCTGTATTCATATTGTGT +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRLLQNA*PVFILC
Trigger: ACACAATATGAATACAGGGCATGCATTTTGCAGCAG...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGACTCACTGCTGCAAAATaGATGCCCTGTATTCATATT +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRLTAAK*MPCIHI
Trigger: AATATGAATACAGGGCATGCATTTTGCAGCAGTGAG...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp ACGCAAGATTTTCATCTTTTTGAGATCCAGCCTCACGAGGGACATATGAATTTTTCCACTACACCTTTTTaGTTTTGTGACATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TQDFHLFEIQPHEGHMNFSTTPF*FCDIGL
Trigger: AAGGCCAATGTCACAAAACCAAAAAGGTGTAGTGGA...AAAATTCATATGTCCCTCGTGAGGCTGGATCTCAAAAAGATGAAAATCTTGCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGATATCTGAGAACATCTaGGCAAGTTTCAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEISENI*ASFNRR
Trigger: TCTCCTATTGAAACTTGCCCAGATGTTCTCAGATAT...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGAACAGAAAGAAACTGCTaGGATTCCAGAATATGCAAG +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRTERNC*DSRICK
Trigger: CTTGCATATTCTGGAATCCCAGCAGTTTCTTTCTGT...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTTATAGGTGTCCATGGTaGTACCCAAATAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPYRCPW*YPNKDN
Trigger: ATTATCCTTATTTGGGTACCACCATGGACACCTATA...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGAATGTCTGCTCTGTATTaGTTCAGATCCCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRMSALY*FRSLTN
Trigger: ATTTGTGAGGGATCTGAACCAATACAGAGCAGACAT...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTAATATACTAAGTCTTTaGCTTCTGGTCCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPNILSL*LLVPSF
Trigger: AAAAGAGGGGACCAGAAGCCAAAGACTTAGTATATT...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAAATATACTAAGTCTTTaGCTTCTGGTCCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRNILSL*LLVPSF
Trigger: AAAAGAGGGGACCAGAAGCCAAAGACTTAGTATATT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTACTTCCAGTATCTGTTaGGTTTTATTAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHITSSIC*VLLADA
Trigger: AGCATCTGCTAATAAAACCCAACAGATACTGGAAGT...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAGTTCTTTATACATTATaGAAGACACTGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: EETHCCKMHALYSYCVIRVLYTL*KTLLPI
Trigger: TATCGGGAGCAGTGTCTTCCATAATGTATAAAGAAC...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGGTTCTTTATACATTATaGAAGACACTGCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEVLYTL*KTLLPI
Trigger: TATCGGGAGCAGTGTCTTCCATAATGTATAAAGAAC...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTCAAAAGGTCAATTCTaGATTAAAACTTGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHISKGQF*IKTCPH
Trigger: GTGCGGACAAGTTTTAATCCAGAATTGACCTTTTGA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp CTTAACAAAATGTTGATCACGCCAGACTTTGCTGAGTTTAAATTCACGAAATTGAGTTTCATCTCCACATaGCTGTTATCGCCATCTACT +
Preference number: 4 (lower is better)
Translates to: LNKMLITPDFAEFKFTKLSFIST*LLSPST
Trigger: AGTAGATGGCGATAACAGTCATGTGGAGATGAAACT...CAATTTCGTGAATTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR GCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCAAAAACAGAAAGAAACTaGTGGGATTCCAGAATATGC +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSKTERN*WDSRIC
Trigger: GCATATTCTGGAATCCCAGCAGTTTCTTTCTGTTTT...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTGTATTAAAAGCTGCTaGCTAAAGACATCTAGTAGT +
Preference number: 4 (lower is better)
Translates to: FHSGILSLLARTGLIGSNCIKSC*LKTSSS
Trigger: ACTACTAGATGTCTTTAGGCAGCAGCTTTTAATACA...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAGTGTTGACCATAAATaGAAAACTTCCAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRSVDHK*KTSSIC
Trigger: ACAGATACTGGAAGTTTTGCATTTATGGTCAACACT...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTATACAAAGTCCCTCTaGTTTAAGTCAAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIYTKSL*FKSKGQ
Trigger: TTGACCTTTTGACTTAAAGCAGAGGGACTTTGTATA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTTATACAAAGTCCCTCTaGTTTAAGTCAAAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPYTKSL*FKSKGQ
Trigger: TTGACCTTTTGACTTAAAGCAGAGGGACTTTGTATA...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGAGTACCAAAATTAGCATaGACCAGTTTACCAGTAACT +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRVPKLA*TSLPVT
Trigger: AGTTACTGGTAAACTGGTCCATGCTAATTTTGGTAC...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAGCTCTGGAGATTGTCTaGACAGGTATATTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEALEIV*TGILGN
Trigger: ATTGCCTAATATACCTGTCCAGACAATCTCCAGAGC...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAATGTCTGCTCTGTATTaGTTCAGATCCCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEMSALY*FRSLTN
Trigger: ATTTGTGAGGGATCTGAACCAATACAGAGCAGACAT...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGACCAAGATGATGGGATaGAATTTTAACATCAGGTTT +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEETKMMG*NFNIRF
Trigger: AAACCTGATGTTAAAATTCCATCCCATCATCTTGGT...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTACCAAGATGATGGGATaGAATTTTAACATCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPTKMMG*NFNIRF
Trigger: AAACCTGATGTTAAAATTCCATCCCATCATCTTGGT...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGCTAAGATTAACACTTTaGCCAAAATTTGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEELRLTL*PKFGSI
Trigger: TATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAG...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCAACTTCCAGTATCTGTTaGGTTTTATTAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSTSSIC*VLLADA
Trigger: AGCATCTGCTAATAAAACCCAACAGATACTGGAAGT...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGATCAAAAGGTCAATTCTaGATTAAAACTTGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRSKGQF*IKTCPH
Trigger: GTGCGGACAAGTTTTAATCCAGAATTGACCTTTTGA...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAATCATTTTACAGTGGTTaGATTTACCCACCCAATGCT +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHESFYSG*IYPPNA
Trigger: AGCATTGGGTGGGTAAATTCAACCACTGTAAAATGA...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAATTAAGGCCTTATTCCTaGAATCAACAGTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHELRPYS*NQQLNL
Trigger: GAGGTTCAACTGTTGATTGCAGGAATAAGGCCTTAA...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCAAATTTACCCACCCAATaGTTAATGACCACAAAATGT +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSNLPTQ*LMTTKC
Trigger: ACATTTTGTGGTCATTAAGCATTGGGTGGGTAAATT...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAATATAGGTGTCCATGGTaGTACCCAAATAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNEYRCPW*YPNKDN
Trigger: ATTATCCTTATTTGGGTACCACCATGGACACCTATA...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAGAAGGTCTTTCAACCTaGTATCTCCTATTTAGCATC +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEEGLST*YLLFSI
Trigger: GATGCTAAATAGGAGATACCAGGTTGAAAGACCTTC...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACTAAGATTAACACTTTaGCCAAAATTTGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: KVFQPGISYLASNEVGGSLRLTL*PKFGSI
Trigger: TATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR TCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAACCTTTTTGGTTTTGTaGCATTGGCCTTTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHETFLVL*HWPLCY
Trigger: ATAACACAAAGGCCAATGTCACAAAACCAAAAAGGT...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR TCA 90 bp TTTGACCTGAATCTTAACAAAATGTTGATCACGCCAGACTTTGCTGAGTTTAAAACCTTTTTGGTTTTGTaGCATTGGCCTTTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: FDLNLNKMLITPDFAEFKTFLVL*HWPLCY
Trigger: ATAACACAAAGGCCAATGTCACAAAACCAAAAAGGT...TTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGATTCAGGTCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR TCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAATATTGTGTTATACGATaGACATGCCACATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEYCVIR*TCHMLS
Trigger: TGAAAGCATGTGGCATGTTCATCGTATAACACAATA...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAATGTATTAAAAGCTGCTaGCTAAAGACATCTAGTAGT +
Preference number: 4 (lower is better)
Translates to: SHLEKVFQPGISYLASNECIKSC*LKTSSS
Trigger: ACTACTAGATGTCTTTAGGCAGCAGCTTTTAATACA...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR GCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAGATGAACATGCCACATaGTTTCATTTAAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEDEHAT*FHLSTC
Trigger: ACACGTACTTAAATGAAAGCATGTGGCATGTTCATC...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAACTCACACTCAGTTTTTaGTTCTACCCCTTTACAATA +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHELTLSF*FYPFTI
Trigger: TATTGTAAAGGGGTAGAACCAAAAACTGAGTGTGAG...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CCA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAATATCTGAGAACATCTaGGCAAGTTTCAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEISENI*ASFNRR
Trigger: TCTCCTATTGAAACTTGCCCAGATGTTCTCAGATAT...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS CCA 90 bp GGCCGCGACCGCTTTCCCGCTCCCCGTGCGGCTCCCTATGGCTGCTaGACAGCACCGGAGCGGCCGCTCCAGCCAGCCCCGCAGGATGAA +
Preference number: 5 (lower is better)
Translates to: GRDRFPAPRAAPYGC*TAPERPLQPAPQDE
Trigger: TTCATCCTGCGGGGCTGGCTGGAGCGGCCGCTCCGGTGCTGTCCAGCAGCCATAGGGAGCCGCACGGGGAGCGGGAAAGCGGTCGCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS GCA 90 bp AGGGAAGTCCTCTCCTGGCTCCTCCCTCACTGGAGACTCGGTTCCTaGCAGTCTCTCACACTCAGTTTTTGGTTCTACCCCTTTACAATA +
Preference number: 5 (lower is better)
Translates to: REVLSWLLPHWRLGS*QSLTLSFWFYPFTI
Trigger: TATTGTAAAGGGGTAGAACCAAAAACTGAGTGTGAGAGACTGGCAGGAACCGAGTCTCCAGTGAGGGAGGAGCCAGGAGAGGACTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS CCA 90 bp GTGAGAGCCGGAGCCCCAGAAGACATGTCGGAAAGGAGACTCTTTTaGAGATACGTAGGGAGAGAGGAAGTGATACTCCACTCTCATGAC +
Preference number: 5 (lower is better)
Translates to: VRAGAPEDMSERRLF*RYVGREEVILHSHD
Trigger: GTCATGAGAGTGGAGTATCACTTCCTCTCTCCCTACGTATCTCCAAAAGAGTCTCCTTTCCGACATGTCTTCTGGGGCTCCGGCTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS CCA 90 bp GGCTATGGTACTCACGTGAGTTCTAAGAGCAAGAGCCTCACATTCTaGCTTCGCCATCGAGGTAACAGTGACGACAGTTCCACCCTTGCT +
Preference number: 5 (lower is better)
Translates to: GYGTHVSSKSKSLTF*LRHRGNSDDSSTLA
Trigger: AGCAAGGGTGGAACTGTCGTCACTGTTACCTCGATGGCGAAGCCAGAATGTGAGGCTCTTGCTCTTAGAACTCACGTGAGTACCATAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS-3UTR CAA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGCTGAGCTATAAAATTTaGCAGGAGTACTACCACAGC +
Preference number: 5 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQLSYKI*QEYYHS
Trigger: GCTGTGGTAGTACTCCTGCAAAATTTTATAGCTCAG...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGTCTCACACTCAGTTTTaGGTTCTACCCCTTTACAAT +
Preference number: 5 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQSHTQF*VLPLYN
Trigger: ATTGTAAAGGGGTAGAACCAAAAACTGAGTGTGAGA...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTGCCTACACCGGATTTaGCAGCTCCAGGGCCCCATG +
Preference number: 5 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRCLHRI*QLQGPM
Trigger: CATGGGGCCCTGGAGCTGCAAAATCCGGTGTAGGCA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCGCTGCTCGTGCCACTTaGTTCAACTCAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSAARAT*FNSGIL
Trigger: GAGGATTCCTGAGTTGAACAAAGTGGCACGAGCAGC...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CACGAATGGGTAGGCAGACGTGTCAGACCTTCAGGGGACTCTCCTTCCCCACAGCCTAAGATTAACACTTaGGCCAAAATTTGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: HEWVGRRVRPSGDSPSPQPKINT*AKIWQH
Trigger: ATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAGG...CTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACACGTCTGCCTACCCATTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGGTTATCGCCATCTACTaGCCGAGCCAGGCTGAACCG +
Preference number: 5 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRVIAIY*PSQAEP
Trigger: CGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAAC...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS TCA 90 bp TTGTCAATGTCCCAAACGTCACCAGAGAGGGCATTTGCAGCTCCCTaGATAGTCCAAGTAGCTAGAGCCAACTGGTTTCTGAACAGCGTT +
Preference number: 5 (lower is better)
Translates to: LSMSQTSPERAFAAP*IVQVARANWFLNSV
Trigger: AACGCTGTTCAGAAACCAGTTGGCTCTAGCTACTTGGACTATTCAGGGAGCTGCAAATGCCCTCTCTGGTGACGTTTGGGACATTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCTTTTCATTCAGCAGCTaGATGGTGCCGGTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSFSFSS*MVPVKS
Trigger: AGACTTCACCGGCACCATCAAGCTGCTGAATGAAAA...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGATGCCTACACCGGATTTaGCAGCTCCAGGGCCCCATG +
Preference number: 5 (lower is better)
Translates to: EETHCCKMHALYSYCVIRCLHRI*QLQGPM
Trigger: CATGGGGCCCTGGAGCTGCAAAATCCGGTGTAGGCA...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACGCAGAAACCTTGAAGTaGCTGGTACCAAGAACCGCT +
Preference number: 5 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYAETLK*LVPRTA
Trigger: AGCGGTTCTTGGTACCAGCAACTTCAAGGTTTCTGC...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGGGGCTGGCAGAAACCTaGAAGTTGCTGGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRGLAET*KLLVPR
Trigger: TCTTGGTACCAGCAACTTCAAGGTTTCTGCCAGCCC...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS CCA 90 bp CCTCACTGGAGACTCGGTTCCTGCCAGTCTCTCACACTCAGTTTTTaGTTCTACCCCTTTACAATAGCCCAAGTAGCCAATCATAAATCC +
Preference number: 5 (lower is better)
Translates to: PHWRLGSCQSLTLSF*FYPFTIAQVANHKS
Trigger: GGATTTATGATTGGCTACTTGGGCTATTGTAAAGGGGTAGAACCAAAAACTGAGTGTGAGAGACTGGCAGGAACCGAGTCTCCAGTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS CCA 90 bp ATCACTTCTGGACAACAGCCTAAGCCCACAAGCTCGTGTCCAATATaGGAAGGGATGATAAAGAATACCTCTAGCCATTCAGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: ITSGQQPKPTSSCPI*EGMIKNTSSHSVAP
Trigger: TGGTGCCACTGAATGGCTAGAGGTATTCTTTATCATCCCTTCCCATATTGGACACGAGCTTGTGGGCTTAGGCTGTTGTCCAGAAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475593.5
CDS-3UTR CAA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGATGCCTACACCGGATTTaGCAGCTCCAGGGCCCCATG +
Preference number: 5 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRCLHRI*QLQGPM
Trigger: CATGGGGCCCTGGAGCTGCAAAATCCGGTGTAGGCA...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS TCA 90 bp TTGTCAGCATTTTCTTCTTCATCTACAGCAAGTTTCATCTCCACATaGCTGTTATCGCCATCTACTTGCCGAGCCAGGCTGAACCGGGTA +
Preference number: 5 (lower is better)
Translates to: LSAFSSSSTASFIST*LLSPSTCRARLNRV
Trigger: TACCCGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAACAGTCATGTGGAGATGAAACTTGCTGTAGATGAAGAAGAAAATGCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000421258.1
ENST00000464011.1
CDS TCA 90 bp GACAATGGTTCTCCACCAAACAAGTTAGAGAATGCTGATCTAGCTTaGTCCATCATTCTGAACTGCCACACAGAAGAACCTGCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: DNGSPPNKLENADLA*SIILNCHTEEPAAA
Trigger: AGCGGCTGCAGGTTCTTCTGTGTGGCAGTTCAGAATGATGGATCAAGCTAGATCAGCATTCTCTAACTTGTTTGGTGGAGAACCATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS CCA 90 bp TCCATATTCCCAAACAGCTTTTCTGCAGCAGCTCTGGAGATTGTCTaGACAGGTATATTAGGCAATCCTGATGACCGAGATGGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: SIFPNSFSAAALEIV*TGILGNPDDRDGGN
Trigger: GTTTCCACCATCTCGGTCATCAGGATTGCCTAATATACCTGTCCAGACAATCTCCAGAGCTGCTGCAGAAAAGCTGTTTGGGAATATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGTATGATCACCGAGTTTaGAGCGCTGTCTTTGACCTG +
Preference number: 5 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRYDHRV*SAVFDL
Trigger: CAGGTCAAAGACAGCGCTCAAAACTCGGTGATCATA...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTGGGCTGGCAGAAACCTaGAAGTTGCTGGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTGLAET*KLLVPR
Trigger: TCTTGGTACCAGCAACTTCAAGGTTTCTGCCAGCCC...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTGTGAGTTTCTCAACTTaGCTGGCCCAGTTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTVSFST*LAQLLS
Trigger: GGACAGCAACTGGGCCAGCAAAGTTGAGAAACTCAC...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS CCA 90 bp TCAACTCAGGAATCCTCTCAATCAGTTCCTTATAGGTGTCCATGGTaGTACCCAAATAAGGATAATCTGTGTCCTGCAAGACAACGCGAG +
Preference number: 5 (lower is better)
Translates to: STQESSQSVPYRCPW*YPNKDNLCPARQRE
Trigger: CTCGCGTTGTCTTGCAGGACACAGATTATCCTTATTTGGGTACCACCATGGACACCTATAAGGAACTGATTGAGAGGATTCCTGAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS-3UTR CAA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTATCGCCATCTACTaGCCGAGCCAGGCTGAACCG +
Preference number: 5 (lower is better)
Translates to: SHLEKVFQPGISYLASNEVIAIY*PSQAEP
Trigger: CGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAAC...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR CAA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTATGATCACCGAGTTTaGAGCGCTGTCTTTGACCTG +
Preference number: 5 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRYDHRV*SAVFDL
Trigger: CAGGTCAAAGACAGCGCTCAAAACTCGGTGATCATA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGATCTCTTTCAGCACATaGCTCACAGTGAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRISFST*LTVSFT
Trigger: TGTGAAGCTCACTGTGAGCAATGTGCTGAAAGAGAT...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTGGGCTGGCAGAAACCTaGAAGTTGCTGGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPGLAET*KLLVPR
Trigger: TCTTGGTACCAGCAACTTCAAGGTTTCTGCCAGCCC...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACGTGAGTTTCTCAACTTaGCTGGCCCAGTTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: FHSGILSLLARTGLIGSNVSFST*LAQLLS
Trigger: GGACAGCAACTGGGCCAGCAAAGTTGAGAAACTCAC...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTGCTGCTCGTGCCACTTaGTTCAACTCAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPAARAT*FNSGIL
Trigger: GAGGATTCCTGAGTTGAACAAAGTGGCACGAGCAGC...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACTATGTCTGCTCTGTATaGGTTCAGATCCCTCACAAA +
Preference number: 5 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYYVCSV*VQIPHK
Trigger: TTTGTGAGGGATCTGAACCAATACAGAGCAGACATA...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCAAATATACTAAGTCTTaGGCTTCTGGTCCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSKYTKS*ASGPLF
Trigger: AAAGAGGGGACCAGAAGCCAAAGACTTAGTATATTT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCGGAATCTCCACACTGTaGCACATAACAGCTTTTATA +
Preference number: 5 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSGISTL*HITAFI
Trigger: TATAAAAGCTGTTATGTGCAACAGTGTGGAGATTCC...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000420415.5
CDS CCA 90 bp TGTTCAACTCAGGAATCCTCTCAATCAGTTCCTTATAGGTGTCCATaGTGGTACCCAAATAAGGATAATCTGTGTCCTGCAAGACAACGC +
Preference number: 5 (lower is better)
Translates to: CSTQESSQSVPYRCP*WYPNKDNLCPARQR
Trigger: GCGTTGTCTTGCAGGACACAGATTATCCTTATTTGGGTACCACCATGGACACCTATAAGGAACTGATTGAGAGGATTCCTGAGTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS-3UTR CAA 90 bp CTTAACAAAATGTTGATCACGCCAGACTTTGCTGAGTTTAAATTCACGAAATTGGTTATCGCCATCTACTaGCCGAGCCAGGCTGAACCG +
Preference number: 5 (lower is better)
Translates to: LNKMLITPDFAEFKFTKLVIAIY*PSQAEP
Trigger: CGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAAC...CAATTTCGTGAATTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR CAA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTATGATCACCGAGTTTaGAGCGCTGTCTTTGACCTG +
Preference number: 5 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTYDHRV*SAVFDL
Trigger: CAGGTCAAAGACAGCGCTCAAAACTCGGTGATCATA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCCGGATGCTTCACATTTaGCATTGTTTTCTCAATAAG +
Preference number: 5 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSRMLHI*HCFLNK
Trigger: CTTATTGAGAAAACAATGCAAAATGTGAAGCATCCG...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCAGTGAGTTTCTCAACTTaGCTGGCCCAGTTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: KVFQPGISYLASNEVGGSVSFST*LAQLLS
Trigger: GGACAGCAACTGGGCCAGCAAAGTTGAGAAACTCAC...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GTTGGAGGATCACTCAAAGTAAGCGACCACTTACAACCTTCAGCAGAGACCAGCAACGATCTTCAAGCTTaGAAGATGTCATTGCATGAA +
Preference number: 5 (lower is better)
Translates to: VGGSLKVSDHLQPSAETSNDLQA*KMSLHE
Trigger: TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTT...GCTGGTCTCTGCTGAAGGTTGTAAGTGGTCGCTTACTTTGAGTGATCCTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GTGTGCGTAACACCCGAACCAGGAATCTCAGCTATGACCTTTTCACTTAGCTACTTTCATTCAGGAATATaGAGCCTGTTAGCACGTACT +
Preference number: 5 (lower is better)
Translates to: VCVTPEPGISAMTFSLSYFHSGI*SLLART
Trigger: AGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA...GTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTTTTCATTCAGCAGCTaGATGGTGCCGGTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHIFSFSS*MVPVKS
Trigger: AGACTTCACCGGCACCATCAAGCTGCTGAATGAAAA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTCCTGCAATCAACAGTaGAACCTCATTTTATCCAGC +
Preference number: 5 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRSCNQQ*NLILSS
Trigger: GCTGGATAAAATGAGGTTCAACTGTTGATTGCAGGA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGAACTTCCAGTATCTGTaGGGTTTTATTAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRNFQYL*GFISRC
Trigger: GCATCTGCTAATAAAACCCAACAGATACTGGAAGTT...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGTTTCATTCAGGAATATaGAGCCTGTTAGCACGTACT +
Preference number: 5 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRFHSGI*SLLART
Trigger: AGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS CCA 90 bp ATGCTTCACATTTTGCATTGTTTTCTCAATAAGCGTATACAACAGTaGGCTGGCAGAAACCTTGAAGTTGCTGGTACCAAGAACCGCTTT +
Preference number: 5 (lower is better)
Translates to: MLHILHCFLNKRIQQ*AGRNLEVAGTKNRF
Trigger: AAAGCGGTTCTTGGTACCAGCAACTTCAAGGTTTCTGCCAGCCCACTGTTGTATACGCTTATTGAGAAAACAATGCAAAATGTGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000465288.5
ENST00000475593.5
ENST00000477148.1
CDS CCA 90 bp TCAACTCAGGAATCCTCTCAATCAGTTCCTTATAGGTGTCCATGGTaGTACCCAAATAAGGATAATCTGTGTCCTCGCAAAAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: STQESSQSVPYRCPW*YPNKDNLCPRKNRK
Trigger: CTTTCTGTTTTTGCGAGGACACAGATTATCCTTATTTGGGTACCACCATGGACACCTATAAGGAACTGATTGAGAGGATTCCTGAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000475593.5
ENST00000483983.5
CDS CCA 90 bp TGTTCAACTCAGGAATCCTCTCAATCAGTTCCTTATAGGTGTCCATaGTGGTACCCAAATAAGGATAATCTGTGTCCTCGCAAAAACAGA +
Preference number: 5 (lower is better)
Translates to: CSTQESSQSVPYRCP*WYPNKDNLCPRKNR
Trigger: TCTGTTTTTGCGAGGACACAGATTATCCTTATTTGGGTACCACCATGGACACCTATAAGGAACTGATTGAGAGGATTCCTGAGTTGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000475593.5
ENST00000483983.5
CDS-3UTR CAA 90 bp ACCCTTAGTGTAACATATGGAGATCACTGTCTCCGATACAGACACTGTGGTAGGTTGGCCTTTGTGTTATaGTCAGCATTTTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: TLSVTYGDHCLRYRHCGRLAFVL*SAFSSS
Trigger: TGAAGAAGAAAATGCTGACAATAACACAAAGGCCAA...CCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR CAA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGTCTCACACTCAGTTTTaGGTTCTACCCCTTTACAAT +
Preference number: 5 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRSHTQF*VLPLYN
Trigger: ATTGTAAAGGGGTAGAACCAAAAACTGAGTGTGAGA...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGAATCTCTTTCAGCACATaGCTCACAGTGAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: EETHCCKMHALYSYCVIRISFST*LTVSFT
Trigger: TGTGAAGCTCACTGTGAGCAATGTGCTGAAAGAGAT...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GCTATGACCTTTTCACTTAGCTACGCTAAATGTCAGTCCAAGATAAAAGAGGAGATCTCTTTCAGCACATaGCTCACAGTGAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: AMTFSLSYAKCQSKIKEEISFST*LTVSFT
Trigger: TGTGAAGCTCACTGTGAGCAATGTGCTGAAAGAGAT...CTCCTCTTTTATCTTGGACTGACATTTAGCGTAGCTAAGTGAAAAGGTCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAGCTGCTCGTGCCACTTaGTTCAACTCAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEAARAT*FNSGIL
Trigger: GAGGATTCCTGAGTTGAACAAAGTGGCACGAGCAGC...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGAAATATACTAAGTCTTaGGCTTCTGGTCCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRKYTKS*ASGPLF
Trigger: AAAGAGGGGACCAGAAGCCAAAGACTTAGTATATTT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGAACTTCCAGTATCTGTaGGGTTTTATTAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRNFQYL*GFISRC
Trigger: GCATCTGCTAATAAAACCCAACAGATACTGGAAGTT...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTTAGCACGTACTGGCTaGATAGGAAGTAACTCAACC +
Preference number: 5 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHILARTG*IGSNST
Trigger: GGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CTGCCCTATGACAAACAGCTGATCATCACGTTTATAATGATGGTTCACTCACGGGGAATCTCCACACTGTaGCACATAACAGCTTTTATA +
Preference number: 5 (lower is better)
Translates to: LPYDKQLIITFIMMVHSRGISTL*HITAFI
Trigger: TATAAAAGCTGTTATGTGCAACAGTGTGGAGATTCC...CCGTGAGTGAACCATCATTATAAACGTGATGATCAGCTGTTTGTCATAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000420415.5
CDS-3UTR CAA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTCTCACACTCAGTTTTaGGTTCTACCCCTTTACAAT +
Preference number: 5 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTSHTQF*VLPLYN
Trigger: ATTGTAAAGGGGTAGAACCAAAAACTGAGTGTGAGA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GACCTGAATCTTAACAAAATGTTGATCACGCCAGACTTTGCTGAGTTTAAATTCTATGATCACCGAGTTTaGAGCGCTGTCTTTGACCTG +
Preference number: 5 (lower is better)
Translates to: DLNLNKMLITPDFAEFKFYDHRV*SAVFDL
Trigger: CAGGTCAAAGACAGCGCTCAAAACTCGGTGATCATA...GAATTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGATTCAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR CAA 90 bp ATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTCAACCCTAACTTTAAGCTTTCAGCATTaGCAACCTTTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: ILSLLARTGLIGSNSTLTLSFQH*QPFLQR
Trigger: CCTTTGCAGAAAAGGTTGCAAATGCTGAAAGCTTAA...AGTTAGGGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAAGCAGAAACCTTGAAGTaGCTGGTACCAAGAACCGCT +
Preference number: 5 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEAETLK*LVPRTA
Trigger: AGCGGTTCTTGGTACCAGCAACTTCAAGGTTTCTGC...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTCCTGCAATCAACAGTaGAACCTCATTTTATCCAGC +
Preference number: 5 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHISCNQQ*NLILSS
Trigger: GCTGGATAAAATGAGGTTCAACTGTTGATTGCAGGA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGACTGAGCTATAAAATTTaGCAGGAGTACTACCACAGC +
Preference number: 5 (lower is better)
Translates to: EETHCCKMHALYSYCVIRLSYKI*QEYYHS
Trigger: GCTGTGGTAGTACTCCTGCAAAATTTTATAGCTCAG...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGATTAGCACGTACTGGCTaGATAGGAAGTAACTCAACC +
Preference number: 5 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRLARTG*IGSNST
Trigger: GGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAA...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCATTAGCACGTACTGGCTaGATAGGAAGTAACTCAACC +
Preference number: 5 (lower is better)
Translates to: KVFQPGISYLASNEVGGSLARTG*IGSNST
Trigger: GGTTGAGTTACTTCCTATCAAGCCAGTACGTGCTAA...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTTAAGCTTTCAGCATTaGCAACCTTTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: FHSGILSLLARTGLIGSNLSFQH*QPFLQR
Trigger: CCTTTGCAGAAAAGGTTGCAAATGCTGAAAGCTTAA...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp AAGGGTTTTCTGAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTTTAAGCTTTCAGCATTaGCAACCTTTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: KGFLKRLTAAKCMPCIHILSFQH*QPFLQR
Trigger: CCTTTGCAGAAAAGGTTGCAAATGCTGAAAGCTTAA...AATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp CTTCGAACTTATTCATACCTACATTTAATTGATCACCACGAATGGGTAGGCAGATATGTCTGCTCTGTATaGGTTCAGATCCCTCACAAA +
Preference number: 5 (lower is better)
Translates to: LRTYSYLHLIDHHEWVGRYVCSV*VQIPHK
Trigger: TTTGTGAGGGATCTGAACCAATACAGAGCAGACATA...TCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCATCCTGCAATCAACAGTaGAACCTCATTTTATCCAGC +
Preference number: 5 (lower is better)
Translates to: KVFQPGISYLASNEVGGSSCNQQ*NLILSS
Trigger: GCTGGATAAAATGAGGTTCAACTGTTGATTGCAGGA...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAATATACTAAGTCTTaGGCTTCTGGTCCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRKYTKS*ASGPLF
Trigger: AAAGAGGGGACCAGAAGCCAAAGACTTAGTATATTT...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACCCTAAGATTAACACTTaGGCCAAAATTTGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: FHSGILSLLARTGLIGSNPKINT*AKIWQH
Trigger: ATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAGG...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp TCTGATATTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGCCTAAGATTAACACTTaGGCCAAAATTTGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: SDISFRNIEPVSTYWLDRPKINT*AKIWQH
Trigger: ATGCTGCCAAATTTTGGCCAAAGTGTTAATCTTAGG...CCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS GCA 90 bp ACATATTCCTACCGCAATTTACCCCAATTCTATCTCATTATCTGCTaGTTTAAGTACATTCTTGCTACTTCTCTCAAGCTAACCTACTCC +
Preference number: 5 (lower is better)
Translates to: TYSYRNLPQFYLIIC*FKYILATSLKLTYS
Trigger: GGAGTAGGTTAGCTTGAGAGAAGTAGCAAGAATGTACTTAAAGCAGCAGATAATGAGATAGAATTGGGGTAAATTGCGGTAGGAATATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS-3UTR CAA 90 bp GAAGAGACTCACTGCTGCAAAATGCATGCCCTGTATTCATATTGTGTTATACGATTTGGTTTTGTGACATaGGCCTTTGTGTTATTGTCA +
Preference number: 5 (lower is better)
Translates to: EETHCCKMHALYSYCVIRFGFVT*AFVLLS
Trigger: TGACAATAACACAAAGGCCAATGTCACAAAACCAAA...TCGTATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR CAA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTCGGATGCTTCACATTTaGCATTGTTTTCTCAATAAG +
Preference number: 5 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPRMLHI*HCFLNK
Trigger: CTTATTGAGAAAACAATGCAAAATGTGAAGCATCCG...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAACTGAGCTATAAAATTTaGCAGGAGTACTACCACAGC +
Preference number: 5 (lower is better)
Translates to: SHLEKVFQPGISYLASNELSYKI*QEYYHS
Trigger: GCTGTGGTAGTACTCCTGCAAAATTTTATAGCTCAG...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACAACGATCTTCAAGCTTaGAAGATGTCATTGCATGAA +
Preference number: 5 (lower is better)
Translates to: FHSGILSLLARTGLIGSNNDLQA*KMSLHE
Trigger: TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTT...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCATTCATTTTACAGTGGTaGAATTTACCCACCCAATGC +
Preference number: 5 (lower is better)
Translates to: KVFQPGISYLASNEVGGSFILQW*NLPTQC
Trigger: GCATTGGGTGGGTAAATTCAACCACTGTAAAATGAA...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp TTTCATTCAGGAATATTGAGCCTGTTAGCACGTACTGGCTTGATAGGAAGTAACTGCCCTGTATTCATATaGTGTTATACGATGAACATG +
Preference number: 5 (lower is better)
Translates to: FHSGILSLLARTGLIGSNCPVFI*CYTMNM
Trigger: CATGTTCATCGTATAACACAATATGAATACAGGGCA...GTTACTTCCTATCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GCTACATTCCTTATGGAAAGGCTTAGATCTCATTTGGAGAAGGTCTTTCAACCTTGCCCTGTATTCATATaGTGTTATACGATGAACATG +
Preference number: 5 (lower is better)
Translates to: ATFLMERLRSHLEKVFQPCPVFI*CYTMNM
Trigger: CATGTTCATCGTATAACACAATATGAATACAGGGCA...AGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTCCATAAGGAATGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS GCA 90 bp CTAACATATTCCTACCGCAATTTACCCCAATTCTATCTCATTATCTaGTGCTTTAAGTACATTCTTGCTACTTCTCTCAAGCTAACCTAC +
Preference number: 5 (lower is better)
Translates to: LTYSYRNLPQFYLII*CFKYILATSLKLTY
Trigger: GTAGGTTAGCTTGAGAGAAGTAGCAAGAATGTACTTAAAGCAGCAGATAATGAGATAGAATTGGGGTAAATTGCGGTAGGAATATGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS-3UTR CAA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCATTTGGTTTTGTGACATaGGCCTTTGTGTTATTGTCA +
Preference number: 5 (lower is better)
Translates to: KVFQPGISYLASNEVGGSFGFVT*AFVLLS
Trigger: TGACAATAACACAAAGGCCAATGTCACAAAACCAAA...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS-3UTR CAA 90 bp AAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAAGTTGGAGGATCACGGATGCTTCACATTTaGCATTGTTTTCTCAATAAG +
Preference number: 5 (lower is better)
Translates to: KVFQPGISYLASNEVGGSRMLHI*HCFLNK
Trigger: CTTATTGAGAAAACAATGCAAAATGTGAAGCATCCG...TGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAATATGTCTGCTCTGTATaGGTTCAGATCCCTCACAAA +
Preference number: 5 (lower is better)
Translates to: GYMLDTNDLQALKMSLHEYVCSV*VQIPHK
Trigger: TTTGTGAGGGATCTGAACCAATACAGAGCAGACATA...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp TCTCATTTGGAGAAGGTCTTTCAACCTGGTATCTCCTATTTAGCATCAAATGAATTTCATTCAGGAATATaGAGCCTGTTAGCACGTACT +
Preference number: 5 (lower is better)
Translates to: SHLEKVFQPGISYLASNEFHSGI*SLLART
Trigger: AGTACGTGCTAACAGGCTCAATATTCCTGAATGAAA...TTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS-3UTR CAA 90 bp GACCTGAATCTTAACAAAATGTTGATCACGCCAGACTTTGCTGAGTTTAAATTCTTTGGTTTTGTGACATaGGCCTTTGTGTTATTGTCA +
Preference number: 5 (lower is better)
Translates to: DLNLNKMLITPDFAEFKFFGFVT*AFVLLS
Trigger: TGACAATAACACAAAGGCCAATGTCACAAAACCAAA...GAATTTAAACTCAGCAAAGTCTGGCGTGATCAACATTTTGTTAAGATTCAGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421258.1
CDS-3UTR CAA 90 bp GGATACATGTTAGATACTAACGATCTTCAAGCTTTGAAGATGTCATTGCATGAATTGGCCTTTGTGTTATaGTCAGCATTTTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GYMLDTNDLQALKMSLHELAFVL*SAFSSS
Trigger: TGAAGAAGAAAATGCTGACAATAACACAAAGGCCAA...TTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360110.9
ENST00000392396.7
CDS CCA 72 bp CGCTTTCCCGCTCCCCGTGCGGCTCCCTATGGCTGCTaGACAGCACCGGAGCGGCCGCTCCAGCCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: RFPAPRAAPYGC*TAPERPLQPAP
Trigger: CGGGGCTGGCTGGAGCGGCCGCTCCGGTGCTGTCCAGCAGCCATAGGGAGCCGCACGGGGAGCGGGAAAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS CCA 72 bp CCGCGACCGCTTTCCCGCTCCCCGTGCGGCTCCCTATaGCTGCTGGACAGCACCGGAGCGGCCGCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: PRPLSRSPCGSL*LLDSTGAAAPA
Trigger: GGCTGGAGCGGCCGCTCCGGTGCTGTCCAGCAGCCATAGGGAGCCGCACGGGGAGCGGGAAAGCGGTCGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS GCA 72 bp GACCGCTTTCCCGCTCCCCGTGCGGCTCCCTATGGCTaGTGGACAGCACCGGAGCGGCCGCTCCAGCCAGCC +
Preference number: 6 (lower is better)
Translates to: DRFPAPRAAPYG*WTAPERPLQPA
Trigger: GGCTGGCTGGAGCGGCCGCTCCGGTGCTGTCCAGCAGCCATAGGGAGCCGCACGGGGAGCGGGAAAGCGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS GCA 72 bp CTCTCCTGGCTCCTCCCTCACTGGAGACTCGGTTCCTaGCAGTCTCTCACACTCAGTTTTTGGTTCTACCCC +
Preference number: 6 (lower is better)
Translates to: LSWLLPHWRLGS*QSLTLSFWFYP
Trigger: GGGGTAGAACCAAAAACTGAGTGTGAGAGACTGGCAGGAACCGAGTCTCCAGTGAGGGAGGAGCCAGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS GCA 72 bp CTGAGAACATCTGGGCAAGTTTCAATAGGAGAGCTGTaGCTACACCGGATTTTGCAGCTCCAGGGCCCCATG +
Preference number: 6 (lower is better)
Translates to: LRTSGQVSIGEL*LHRILQLQGPM
Trigger: CATGGGGCCCTGGAGCTGCAAAATCCGGTGTAGGCACAGCTCTCCTATTGAAACTTGCCCAGATGTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000464368.1
CDS CCA 72 bp AATGCAGGGACGAAAGGTATCCCTCTAGCCATTCAGTaGCACCAACCGATCCAAAGTCTCCAGCACTCCAAC +
Preference number: 6 (lower is better)
Translates to: NAGTKGIPLAIQ*HQPIQSLQHSN
Trigger: GTTGGAGTGCTGGAGACTTTGGATCGGTTGGTGCCACTGAATGGCTAGAGGGATACCTTTCGTCCCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000464368.1
ENST00000465288.5
ENST00000477148.1
CDS TCA 72 bp TCCCAAACGTCACCAGAGAGGGCATTTGCAGCTCCCTaGATAGTCCAAGTAGCTAGAGCCAACTGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: SQTSPERAFAAP*IVQVARANWFL
Trigger: CAGAAACCAGTTGGCTCTAGCTACTTGGACTATTCAGGGAGCTGCAAATGCCCTCTCTGGTGACGTTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS GCA 72 bp AATCACGAACTGACCAGCGACCTCTGCAGCTGCTCGTaGCACTTTGTTCAACTCAGGAATCCTCTCAATCAG +
Preference number: 6 (lower is better)
Translates to: NHELTSDLCSCS*HFVQLRNPLNQ
Trigger: CTGATTGAGAGGATTCCTGAGTTGAACAAAGTGGCACGAGCAGCTGCAGAGGTCGCTGGTCAGTTCGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000463047.1
ENST00000475593.5
ENST00000483983.5
CDS CCA 72 bp GGAGCCCCAGAAGACATGTCGGAAAGGAGACTCTTTTaGAGATACGTAGGGAGAGAGGAAGTGATACTCCAC +
Preference number: 6 (lower is better)
Translates to: GAPEDMSERRLF*RYVGREEVILH
Trigger: GTGGAGTATCACTTCCTCTCTCCCTACGTATCTCCAAAAGAGTCTCCTTTCCGACATGTCTTCTGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS TCA 72 bp GCCATCTACTTGCCGAGCCAGGCTGAACCGGGTATATaGCAATGGTTCTCCACCAAACAAGTTAGAGAATGC +
Preference number: 6 (lower is better)
Translates to: AIYLPSQAEPGI*QWFSTKQVREC
Trigger: GCATTCTCTAACTTGTTTGGTGGAGAACCATTGTCATATACCCGGTTCAGCCTGGCTCGGCAAGTAGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000421258.1
ENST00000464011.1
CDS TCA 72 bp CATGACTGTTATCGCCATCTACTTGCCGAGCCAGGCTaGACCGGGTATATGACAATGGTTCTCCACCAAACA +
Preference number: 6 (lower is better)
Translates to: HDCYRHLLAEPG*TGYMTMVLHQT
Trigger: TGTTTGGTGGAGAACCATTGTCATATACCCGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAACAGTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000421258.1
ENST00000464011.1
CDS CAA 90 bp CATTCTGGCTTCGCCATCGAGGTAACAGTGACGACAGTTCCACCCTaGCTTCTAACATATTCCTACCGCAATTTACCCCAATTCTATCTC +
Preference number: 6 (lower is better)
Translates to: HSGFAIEVTVTTVPP*LLTYSYRNLPQFYL
Trigger: GAGATAGAATTGGGGTAAATTGCGGTAGGAATATGTTAGAAGCAAGGGTGGAACTGTCGTCACTGTTACCTCGATGGCGAAGCCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS TCA 72 bp TTCAATTCAACATCATGGGTTAGTTTAATCACGAACTaGCCAGCGACCTCTGCAGCTGCTCGTGCCACTTTG +
Preference number: 6 (lower is better)
Translates to: FNSTSWVSLITN*PATSAAARATL
Trigger: CAAAGTGGCACGAGCAGCTGCAGAGGTCGCTGGTCAGTTCGTGATTAAACTAACCCATGATGTTGAATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000463047.1
ENST00000475593.5
ENST00000483983.5
CDS CCA 72 bp CCAAACAGCTTTTCTGCAGCAGCTCTGGAGATTGTCTaGACAGGTATATTAGGCAATCCTGATGACCGAGAT +
Preference number: 6 (lower is better)
Translates to: PNSFSAAALEIV*TGILGNPDDRD
Trigger: ATCTCGGTCATCAGGATTGCCTAATATACCTGTCCAGACAATCTCCAGAGCTGCTGCAGAAAAGCTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
CDS CCA 72 bp CGTGAGAAAATCTGCCTAGCAACTGCCTGTCAACCTTaGACTGGTGTCATCCTTGTTATTGATCTTGGTAGC +
Preference number: 6 (lower is better)
Translates to: REKICLATACQP*TGVILVIDLGS
Trigger: GCTACCAAGATCAATAACAAGGATGACACCAGTCCAAGGTTGACAGGCAGTTGCTAGGCAGATTTTCTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463356.5
CDS CAA 72 bp TTCGCCATCGAGGTAACAGTGACGACAGTTCCACCCTaGCTTCTAACATATTCCTACCGCAATTTACCCCAA +
Preference number: 6 (lower is better)
Translates to: FAIEVTVTTVPP*LLTYSYRNLPQ
Trigger: TTGGGGTAAATTGCGGTAGGAATATGTTAGAAGCAAGGGTGGAACTGTCGTCACTGTTACCTCGATGGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS TCA 72 bp TTTTCTTCTTCATCTACAGCAAGTTTCATCTCCACATaGCTGTTATCGCCATCTACTTGCCGAGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: FSSSSTASFIST*LLSPSTCRARL
Trigger: CAGCCTGGCTCGGCAAGTAGATGGCGATAACAGTCATGTGGAGATGAAACTTGCTGTAGATGAAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000421258.1
ENST00000464011.1
CDS CAA 72 bp TCAATAAGCGTATACAACAGTGGGCTGGCAGAAACCTaGAAGTTGCTGGTACCAAGAACCGCTTTATCCAGA +
Preference number: 6 (lower is better)
Translates to: SISVYNSGLAET*KLLVPRTALSR
Trigger: TCTGGATAAAGCGGTTCTTGGTACCAGCAACTTCAAGGTTTCTGCCAGCCCACTGTTGTATACGCTTATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000465288.5
ENST00000475593.5
ENST00000477148.1
CDS CCA 72 bp AAACTCAGGCCCATTTCCTTTATGTCTGCTCTGTATTaGTTCAGATCCCTCACAAATGAAAGCAGTTGGCTG +
Preference number: 6 (lower is better)
Translates to: KLRPISFMSALY*FRSLTNESSWL
Trigger: CAGCCAACTGCTTTCATTTGTGAGGGATCTGAACCAATACAGAGCAGACATAAAGGAAATGGGCCTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000426789.5
ENST00000463047.1
ENST00000475593.5
CDS TCA 72 bp TCTCCACCAAACAAGTTAGAGAATGCTGATCTAGCTTaGTCCATCATTCTGAACTGCCACACAGAAGAACAC +
Preference number: 6 (lower is better)
Translates to: SPPNKLENADLA*SIILNCHTEEH
Trigger: GTGTTCTTCTGTGTGGCAGTTCAGAATGATGGATCAAGCTAGATCAGCATTCTCTAACTTGTTTGGTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360110.9
ENST00000421258.1
ENST00000464011.1
CDS TCA 72 bp TCTCCACCAAACAAGTTAGAGAATGCTGATCTAGCTTaGTCCATCATTCTGAACTGCCACACAGAAGAACCT +
Preference number: 6 (lower is better)
Translates to: SPPNKLENADLA*SIILNCHTEEP
Trigger: AGGTTCTTCTGTGTGGCAGTTCAGAATGATGGATCAAGCTAGATCAGCATTCTCTAACTTGTTTGGTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392396.7
CDS TCA 72 bp TCTTGCTACTTCTCTCAAGCTAACCTACTCCTAGAGTaGCTACTTTCTTCCAGGTTCTACAGAATCCCTGTT +
Preference number: 6 (lower is better)
Translates to: SCYFSQANLLLE*LLSSRFYRIPV
Trigger: AACAGGGATTCTGTAGAACCTGGAAGAAAGTAGTCACTCTAGGAGTAGGTTAGCTTGAGAGAAGTAGCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS CCA 72 bp GAATCCTCTCAATCAGTTCCTTATAGGTGTCCATGGTaGTACCCAAATAAGGATAATCTGTGTCCTCGCAAA +
Preference number: 6 (lower is better)
Translates to: ESSQSVPYRCPW*YPNKDNLCPRK
Trigger: TTTGCGAGGACACAGATTATCCTTATTTGGGTACCACCATGGACACCTATAAGGAACTGATTGAGAGGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000475593.5
ENST00000483983.5
CDS CCA 72 bp GAATCCTCTCAATCAGTTCCTTATAGGTGTCCATGGTaGTACCCAAATAAGGATAATCTGTGTCCTGCAAGA +
Preference number: 6 (lower is better)
Translates to: ESSQSVPYRCPW*YPNKDNLCPAR
Trigger: TCTTGCAGGACACAGATTATCCTTATTTGGGTACCACCATGGACACCTATAAGGAACTGATTGAGAGGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS TCA 72 bp TCTTGGAGTTCCTTAACTTCTGGACCCAGAGATCATTaGAAACAGTGTAAGCATGATGATGCACATCTTGAG +
Preference number: 6 (lower is better)
Translates to: SWSSLTSGPRDH*KQCKHDDAHLE
Trigger: CTCAAGATGTGCATCATCATGCTTACACTGTTTTCAATGATCTCTGGGTCCAGAAGTTAAGGAACTCCAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465288.5
CDS CCA 72 bp ATTTTGCATTGTTTTCTCAATAAGCGTATACAACAGTaGGCTGGCAGAAACCTTGAAGTTGCTGGTACCAAG +
Preference number: 6 (lower is better)
Translates to: ILHCFLNKRIQQ*AGRNLEVAGTK
Trigger: CTTGGTACCAGCAACTTCAAGGTTTCTGCCAGCCCACTGTTGTATACGCTTATTGAGAAAACAATGCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000420415.5
ENST00000465288.5
ENST00000475593.5
ENST00000477148.1
CDS TCA 72 bp ATACACAGACAAGGATGGAAGGTATCCCACTTAAGATaGATCAGAAGGTCTAATTCCAAGATAGCAGATTCC +
Preference number: 6 (lower is better)
Translates to: IHRQGWKVSHLR*IRRSNSKIADS
Trigger: GGAATCTGCTATCTTGGAATTAGACCTTCTGATTCATCTTAAGTGGGATACCTTCCATCCTTGTCTGTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477148.1
CDS CCA 72 bp AATAGTCCCATAGCAGATACTTCCACTACACCTTTTTaGTTTTGTGACATTGGCCTTTGTGTTATTGTCAGC +
Preference number: 6 (lower is better)
Translates to: NSPIADTSTTPF*FCDIGLCVIVS
Trigger: GCTGACAATAACACAAAGGCCAATGTCACAAAACCAAAAAGGTGTAGTGGAAGTATCTGCTATGGGACTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360110.9
ENST00000392396.7
ENST00000421258.1
ENST00000464011.1
CDS GCA 72 bp TCCTACCGCAATTTACCCCAATTCTATCTCATTATCTaGTGCTTTAAGTACATTCTTGCTACTTCTCTCAAG +
Preference number: 6 (lower is better)
Translates to: SYRNLPQFYLII*CFKYILATSLK
Trigger: CTTGAGAGAAGTAGCAAGAATGTACTTAAAGCAGCAGATAATGAGATAGAATTGGGGTAAATTGCGGTAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS GCA 72 bp TACCGCAATTTACCCCAATTCTATCTCATTATCTGCTaGTTTAAGTACATTCTTGCTACTTCTCTCAAGCTA +
Preference number: 6 (lower is better)
Translates to: YRNLPQFYLIIC*FKYILATSLKL
Trigger: TAGCTTGAGAGAAGTAGCAAGAATGTACTTAAAGCAGCAGATAATGAGATAGAATTGGGGTAAATTGCGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463047.1
CDS CAA 72 bp GTCAACCTTGGACTGGTGTCATCCTTGTTATTGATCTaGGTAGCCAAGAATAATTACCTCAAAGTAATTTTG +
Preference number: 6 (lower is better)
Translates to: VNLGLVSSLLLI*VAKNNYLKVIL
Trigger: CAAAATTACTTTGAGGTAATTATTCTTGGCTACCAAGATCAATAACAAGGATGACACCAGTCCAAGGTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463356.5
CDS CAA 72 bp TCAATAAGCGTATACAACAGTGGGCTGGCAGAAACCTaGAAGTTGCTGGTACCTGAAAATAAATTGTTTTAT +
Preference number: 6 (lower is better)
Translates to: SISVYNSGLAET*KLLVPENKLFY
Trigger: ATAAAACAATTTATTTTCAGGTACCAGCAACTTCAAGGTTTCTGCCAGCCCACTGTTGTATACGCTTATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483983.5
CDS CAA 72 bp ATCATTGAAAACAGTGTAAGCATGATGATGCACATCTaGAGAAAAATCTTCAGAGGTAAATCCAAACATTGG +
Preference number: 6 (lower is better)
Translates to: IIENSVSMMMHI*RKIFRGKSKHW
Trigger: CCAATGTTTGGATTTACCTCTGAAGATTTTTCTCAAGATGTGCATCATCATGCTTACACTGTTTTCAATGAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465288.5