Pregenerated sensors for TFPI2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000234695Ensembl transcript IDs: ENST00000435257.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | ATCACTAGCAGGTCATTTCCGTCTAGCTTGCAGATTTCCCATTACTaGCACAAACGCTCCCTCAGGGCGTCCCCGTCTGGACTACAGGAG | + |
Preference number: 5 (lower is better) Translates to: ITSRSFPSSLQISHY*HKRSLRASPSGLQE Trigger: CTCCTGTAGTCCAGACGGGGACGCCCTGAGGGAGCGTTTGTGTCAGTAATGGGAAATCTGCAAGCTAGACGGAAATGACCTGCTAGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435257.1 |
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CDS GCA 90 bp | GGCTTCTTTACAGCGCAATCACTAGCAGGTCATTTCCGTCTAGCTTaGAGATTTCCCATTACTGACACAAACGCTCCCTCAGGGCGTCCC | + |
Preference number: 5 (lower is better) Translates to: GFFTAQSLAGHFRLA*RFPITDTNAPSGRP Trigger: GGGACGCCCTGAGGGAGCGTTTGTGTCAGTAATGGGAAATCTGCAAGCTAGACGGAAATGACCTGCTAGTGATTGCGCTGTAAAGAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435257.1 |
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CDS CCA 72 bp | TTACTGACACAAACGCTCCCTCAGGGCGTCCCCGTCTaGACTACAGGAGAAAGTTTGGGAGGCAGGTTCAAC | + |
Preference number: 6 (lower is better) Translates to: LLTQTLPQGVPV*TTGESLGGRFN Trigger: GTTGAACCTGCCTCCCAAACTTTCTCCTGTAGTCCAGACGGGGACGCCCTGAGGGAGCGTTTGTGTCAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435257.1 |
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CDS TCA 72 bp | AGGTCATTTCCGTCTAGCTTGCAGATTTCCCATTACTaGCACAAACGCTCCCTCAGGGCGTCCCCGTCTGGA | + |
Preference number: 6 (lower is better) Translates to: RSFPSSLQISHY*HKRSLRASPSG Trigger: TCCAGACGGGGACGCCCTGAGGGAGCGTTTGTGTCAGTAATGGGAAATCTGCAAGCTAGACGGAAATGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435257.1 |