Pregenerated sensors for TFIP11-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000261188Ensembl transcript IDs: ENST00000565764.1, ENST00000566814.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCTTAAACTCCTGCATAAAGGCCACTGCCCTGTGCCCACGACGGTaGTTATACCGAGAGCGTCAAAGATACAGGAATCACAGTCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: LLNSCIKATALCPRR*LYRERQRYRNHSLD Trigger: GTCAAGACTGTGATTCCTGTATCTTTGACGCTCTCGGTATAAGCACCGTCGTGGGCACAGGGCAGTGGCCTTTATGCAGGAGTTTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS GCA 90 bp | ACTCCAGAGTTTGCCCATTCATTCCTTCATTCCCTCTTAAACTCCTaGATAAAGGCCACTGCCCTGTGCCCACGACGGTGCTTATACCGA | + |
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Preference number: 5 (lower is better) Translates to: TPEFAHSFLHSLLNS*IKATALCPRRCLYR Trigger: TCGGTATAAGCACCGTCGTGGGCACAGGGCAGTGGCCTTTATGCAGGAGTTTAAGAGGGAATGAAGGAATGAATGGGCAAACTCTGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS GCA 90 bp | TTCCTTCATTCCCTCTTAAACTCCTGCATAAAGGCCACTGCCCTGTaGCCACGACGGTGCTTATACCGAGAGCGTCAAAGATACAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: FLHSLLNSCIKATAL*PRRCLYRERQRYRN Trigger: ATTCCTGTATCTTTGACGCTCTCGGTATAAGCACCGTCGTGGGCACAGGGCAGTGGCCTTTATGCAGGAGTTTAAGAGGGAATGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS GCA 90 bp | CCATTCATTCCTTCATTCCCTCTTAAACTCCTGCATAAAGGCCACTaGCCTGTGCCCACGACGGTGCTTATACCGAGAGCGTCAAAGATA | + |
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Preference number: 5 (lower is better) Translates to: PFIPSFPLKLLHKGH*PVPTTVLIPRASKI Trigger: TATCTTTGACGCTCTCGGTATAAGCACCGTCGTGGGCACAGGGCAGTGGCCTTTATGCAGGAGTTTAAGAGGGAATGAAGGAATGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS CCA 90 bp | TCCACAGCTGCTAAATTGCACTCAAGGTTGGAACTCCAGAGCCTGTaGACACTTAAATGTCTACAAGGAGTCCTTGGGCTAGTGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: STAAKLHSRLELQSL*TLKCLQGVLGLVRA Trigger: AGCCCTCACTAGCCCAAGGACTCCTTGTAGACATTTAAGTGTCCACAGGCTCTGGAGTTCCAACCTTGAGTGCAATTTAGCAGCTGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS TCA 90 bp | ACGGTGCTTATACCGAGAGCGTCAAAGATACAGGAATCACAGTCTTaGCCTTCATTATTCCCATTTGAATGCTGTGTCCCAGGCCCCTTA | + |
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Preference number: 5 (lower is better) Translates to: TVLIPRASKIQESQS*PSLFPFECCVPGPL Trigger: TAAGGGGCCTGGGACACAGCATTCAAATGGGAATAATGAAGGTCAAGACTGTGATTCCTGTATCTTTGACGCTCTCGGTATAAGCACCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS GCA 90 bp | TATCACAGGGGTGATGTTGCAATCTTCTCAGGGCATCCTATCAAGTaGCACATAACTTCACTTTGTCCCATTCCTGACAATGCAGACTCT | + |
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Preference number: 5 (lower is better) Translates to: YHRGDVAIFSGHPIK*HITSLCPIPDNADS Trigger: AGAGTCTGCATTGTCAGGAATGGGACAAAGTGAAGTTATGTGGCACTTGATAGGATGCCCTGAGAAGATTGCAACATCACCCCTGTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS CCA 90 bp | TTGCCTCTTGAATCTGCTGGAAACGAAAAGAATGGAAACAGCTCCTaGAGAGAATACTTGGGAACTCCAGAGTTTGCCCATTCATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LPLESAGNEKNGNSS*REYLGTPEFAHSFL Trigger: AAGGAATGAATGGGCAAACTCTGGAGTTCCCAAGTATTCTCTCCAGGAGCTGTTTCCATTCTTTTCGTTTCCAGCAGATTCAAGAGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565764.1 |
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| CDS TCA 90 bp | GTATACAGCATGTCTCTTTACGTGGGTTTGTCTGATATATCCTCATaGTTACATCCAGGTTATGGATCTTCAGCAGGAATATCACAGGGG | + |
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Preference number: 5 (lower is better) Translates to: VYSMSLYVGLSDISS*LHPGYGSSAGISQG Trigger: CCCCTGTGATATTCCTGCTGAAGATCCATAACCTGGATGTAATCATGAGGATATATCAGACAAACCCACGTAAAGAGACATGCTGTATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS GCA 90 bp | AAGTATTTGACTCCAAGTCCCGTGCTCTTTTTACATTCCAACAATTaGCTCTTGAATCTGCTGGAAACGAAAAGAATGGAAACAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: KYLTPSPVLFLHSNN*LLNLLETKRMETAP Trigger: AGGAGCTGTTTCCATTCTTTTCGTTTCCAGCAGATTCAAGAGGCAATTGTTGGAATGTAAAAAGAGCACGGGACTTGGAGTCAAATACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565764.1 |
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| CDS TCA 90 bp | TGTTGTTTAATTCTTAACAACTACTTGATGGTAGACTTAAGTATTTaGCTCCAAGTCCCGTGCTCTTTTTACATTCCAACAATTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: CCLILNNYLMVDLSI*LQVPCSFYIPTIAS Trigger: AGAGGCAATTGTTGGAATGTAAAAAGAGCACGGGACTTGGAGTCAAATACTTAAGTCTACCATCAAGTAGTTGTTAAGAATTAAACAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS TCA 72 bp | GGTGGCTCAGCGGATTCCACACCAGTCATCACAGGCTaGGCGTCACAGTACAAAGCAGGAGCGGCAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GGSADSTPVITG*ASQYKAGAAGR Trigger: CCTCCCTGCCGCTCCTGCTTTGTACTGTGACGCTCAGCCTGTGATGACTGGTGTGGAATCCGCTGAGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS GCA 72 bp | CCTTCATTCCCTCTTAAACTCCTGCATAAAGGCCACTaGCCTGTGCCCACGACGGTGCTTATACCGAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: PSFPLKLLHKGH*PVPTTVLIPRA Trigger: CGCTCTCGGTATAAGCACCGTCGTGGGCACAGGGCAGTGGCCTTTATGCAGGAGTTTAAGAGGGAATGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS GCA 72 bp | TCCTGCATAAAGGCCACTGCCCTGTGCCCACGACGGTaGTTATACCGAGAGCGTCAAAGATACAGGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: SCIKATALCPRR*LYRERQRYRNH Trigger: GTGATTCCTGTATCTTTGACGCTCTCGGTATAAGCACCGTCGTGGGCACAGGGCAGTGGCCTTTATGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS GCA 72 bp | TCCCTCTTAAACTCCTGCATAAAGGCCACTGCCCTGTaGCCACGACGGTGCTTATACCGAGAGCGTCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SLLNSCIKATAL*PRRCLYRERQR Trigger: TCTTTGACGCTCTCGGTATAAGCACCGTCGTGGGCACAGGGCAGTGGCCTTTATGCAGGAGTTTAAGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS GCA 72 bp | TTTGCCCATTCATTCCTTCATTCCCTCTTAAACTCCTaGATAAAGGCCACTGCCCTGTGCCCACGACGGTGC | + |
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Preference number: 6 (lower is better) Translates to: FAHSFLHSLLNS*IKATALCPRRC Trigger: GCACCGTCGTGGGCACAGGGCAGTGGCCTTTATGCAGGAGTTTAAGAGGGAATGAAGGAATGAATGGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS CCA 72 bp | GCCCAAGGTCCACAGCTGCTAAATTGCACTCAAGGTTaGAACTCCAGAGCCTGTGGACACTTAAATGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: AQGPQLLNCTQG*NSRACGHLNVY Trigger: GTAGACATTTAAGTGTCCACAGGCTCTGGAGTTCCAACCTTGAGTGCAATTTAGCAGCTGTGGACCTTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS CCA 72 bp | GGAGGGCCCATGACTGTTCTGCTCATTGTATCACATTaGCCTAGCACAGGTGAGGGGCACTTAGTATATTTT | + |
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Preference number: 6 (lower is better) Translates to: GGPMTVLLIVSH*PSTGEGHLVYF Trigger: AAAATATACTAAGTGCCCCTCACCTGTGCTAGGCCAATGTGATACAATGAGCAGAACAGTCATGGGCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS CAA 72 bp | TGCCCAAGGTCCACAGCTGCTAAATTGCACTCAAGGTaGGAACTCCAGAGCCTGTGGACACTTAAATGTCTA | + |
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Preference number: 6 (lower is better) Translates to: CPRSTAAKLHSR*ELQSLWTLKCL Trigger: TAGACATTTAAGTGTCCACAGGCTCTGGAGTTCCAACCTTGAGTGCAATTTAGCAGCTGTGGACCTTGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS CAA 90 bp | GTAATGACTTGCCCAAGGTCCACAGCTGCTAAATTGCACTCAAGGTaGGAACTCCAGAGCCTGTGGACACTTAAATGTCTACAAGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: VMTCPRSTAAKLHSR*ELQSLWTLKCLQGV Trigger: GACTCCTTGTAGACATTTAAGTGTCCACAGGCTCTGGAGTTCCAACCTTGAGTGCAATTTAGCAGCTGTGGACCTTGGGCAAGTCATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS TCA 72 bp | CCAGGTTATGGATCTTCAGCAGGAATATCACAGGGGTaGTGTTGCAATCTTCTCAGGGCATCCTATCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: PGYGSSAGISQG*CCNLLRASYQV Trigger: CACTTGATAGGATGCCCTGAGAAGATTGCAACATCACCCCTGTGATATTCCTGCTGAAGATCCATAACCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS CCA 72 bp | GCTAAATTGCACTCAAGGTTGGAACTCCAGAGCCTGTaGACACTTAAATGTCTACAAGGAGTCCTTGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: AKLHSRLELQSL*TLKCLQGVLGL Trigger: TAGCCCAAGGACTCCTTGTAGACATTTAAGTGTCCACAGGCTCTGGAGTTCCAACCTTGAGTGCAATTTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS CCA 72 bp | GAATCTGCTGGAAACGAAAAGAATGGAAACAGCTCCTaGAGAGAATACTTGGGAACTCCAGAGTTTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: ESAGNEKNGNSS*REYLGTPEFAH Trigger: ATGGGCAAACTCTGGAGTTCCCAAGTATTCTCTCCAGGAGCTGTTTCCATTCTTTTCGTTTCCAGCAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565764.1 |
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| CDS CAA 72 bp | TTATTCCCATTTGAATGCTGTGTCCCAGGCCCCTTATaGTCTCACAGTATTTACCACAACTACCGTATGGGC | + |
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Preference number: 6 (lower is better) Translates to: LFPFECCVPGPL*SHSIYHNYRMG Trigger: GCCCATACGGTAGTTGTGGTAAATACTGTGAGACAATAAGGGGCCTGGGACACAGCATTCAAATGGGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS CAA 90 bp | TCTGCTGGAAACGAAAAGAATGGAAACAGCTCCTGGAGAGAATACTaGGGAACTCCAGAGTTTGCCCATTCATTCCTTCATTCCCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SAGNEKNGNSSWREY*GTPEFAHSFLHSLL Trigger: TAAGAGGGAATGAAGGAATGAATGGGCAAACTCTGGAGTTCCCAAGTATTCTCTCCAGGAGCTGTTTCCATTCTTTTCGTTTCCAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565764.1 |
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| CDS CAA 90 bp | TTGACTCCAAGTCCCGTGCTCTTTTTACATTCCAACAATTGCCTCTaGAATCTGCTGGAAACGAAAAGAATGGAAACAGCTCCTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LTPSPVLFLHSNNCL*NLLETKRMETAPGE Trigger: CTCTCCAGGAGCTGTTTCCATTCTTTTCGTTTCCAGCAGATTCAAGAGGCAATTGTTGGAATGTAAAAAGAGCACGGGACTTGGAGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565764.1 |
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| CDS CAA 90 bp | TCATGTGTTGTGTTTAGTTGTCATGCCTCTTTGGTCCCCTCCAGTTaGGAACAGTTCCAGGGTCTATCTTTGATTTTCATGACCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SCVVFSCHASLVPSS*EQFQGLSLIFMTLA Trigger: TGCCAAGGTCATGAAAATCAAAGATAGACCCTGGAACTGTTCCAAACTGGAGGGGACCAAAGAGGCATGACAACTAAACACAACACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS TCA 72 bp | CAGTCCACAAAGGTCCCTTCTTCAGAAGCCACAAAGTaGGTTCCATTTGGTGAAGTAAATCCACTAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: QSTKVPSSEATK*VPFGEVNPLAS Trigger: TGATGCTAGTGGATTTACTTCACCAAATGGAACTCACTTTGTGGCTTCTGAAGAAGGGACCTTTGTGGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS GCA 72 bp | TTTGCAGAAGAGAAAACAGGCTTAGATGTAATGACTTaGCCAAGGTCCACAGCTGCTAAATTGCACTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: FAEEKTGLDVMT*PRSTAAKLHSR Trigger: CCTTGAGTGCAATTTAGCAGCTGTGGACCTTGGGCAAGTCATTACATCTAAGCCTGTTTTCTCTTCTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS GCA 72 bp | GGTGATGTTGCAATCTTCTCAGGGCATCCTATCAAGTaGCACATAACTTCACTTTGTCCCATTCCTGACAAT | + |
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Preference number: 6 (lower is better) Translates to: GDVAIFSGHPIK*HITSLCPIPDN Trigger: ATTGTCAGGAATGGGACAAAGTGAAGTTATGTGGCACTTGATAGGATGCCCTGAGAAGATTGCAACATCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS TCA 72 bp | ATACCGAGAGCGTCAAAGATACAGGAATCACAGTCTTaGCCTTCATTATTCCCATTTGAATGCTGTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: IPRASKIQESQS*PSLFPFECCVP Trigger: TGGGACACAGCATTCAAATGGGAATAATGAAGGTCAAGACTGTGATTCCTGTATCTTTGACGCTCTCGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS CAA 72 bp | GACTCCAAGTCCCGTGCTCTTTTTACATTCCAACAATaGCCTCTTGAATCTGCTGGAAACGAAAAGAATGGA | + |
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Preference number: 6 (lower is better) Translates to: DSKSRALFTFQQ*PLESAGNEKNG Trigger: TCCATTCTTTTCGTTTCCAGCAGATTCAAGAGGCAATTGTTGGAATGTAAAAAGAGCACGGGACTTGGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565764.1 |
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| CDS CAA 72 bp | GTCCCCTCCAGTTTGGAACAGTTCCAGGGTCTATCTTaGATTTTCATGACCTTGGCACTTTCTAAGATTACA | + |
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Preference number: 6 (lower is better) Translates to: VPSSLEQFQGLS*IFMTLALSKIT Trigger: TGTAATCTTAGAAAGTGCCAAGGTCATGAAAATCAAAGATAGACCCTGGAACTGTTCCAAACTGGAGGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS GCA 72 bp | ACTCCAAGTCCCGTGCTCTTTTTACATTCCAACAATTaGCTCTTGAATCTGCTGGAAACGAAAAGAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: TPSPVLFLHSNN*LLNLLETKRME Trigger: TTCCATTCTTTTCGTTTCCAGCAGATTCAAGAGGCAATTGTTGGAATGTAAAAAGAGCACGGGACTTGGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565764.1 |
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| CDS CAA 72 bp | AGTCCCGTGCTCTTTTTACATTCCAACAATTGCCTCTaGAATCTGCTGGAAACGAAAAGAATGGAAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPVLFLHSNNCL*NLLETKRMETA Trigger: AGCTGTTTCCATTCTTTTCGTTTCCAGCAGATTCAAGAGGCAATTGTTGGAATGTAAAAAGAGCACGGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565764.1 |
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| CDS TCA 72 bp | ATGTCTCTTTACGTGGGTTTGTCTGATATATCCTCATaGTTACATCCAGGTTATGGATCTTCAGCAGGAATA | + |
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Preference number: 6 (lower is better) Translates to: MSLYVGLSDISS*LHPGYGSSAGI Trigger: TATTCCTGCTGAAGATCCATAACCTGGATGTAATCATGAGGATATATCAGACAAACCCACGTAAAGAGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS CAA 90 bp | TCCAGTTTGGAACAGTTCCAGGGTCTATCTTTGATTTTCATGACCTaGGCACTTTCTAAGATTACAGTTTTGTATACAGCATGTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SSLEQFQGLSLIFMT*ALSKITVLYTACLF Trigger: AAAGAGACATGCTGTATACAAAACTGTAATCTTAGAAAGTGCCAAGGTCATGAAAATCAAAGATAGACCCTGGAACTGTTCCAAACTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS GCA 72 bp | TCTTCAGCACCTACTGTTACCAGGTACGGTTTTCATTaGCTACAGTTTTATCTTATTGAATCCTTAACCATT | + |
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Preference number: 6 (lower is better) Translates to: SSAPTVTRYGFH*LQFYLIESLTI Trigger: AATGGTTAAGGATTCAATAAGATAAAACTGTAGGCAATGAAAACCGTACCTGGTAACAGTAGGTGCTGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS CAA 72 bp | ATTTTCATGACCTTGGCACTTTCTAAGATTACAGTTTaGTATACAGCATGTCTCTTTACGTGGGTTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: IFMTLALSKITV*YTACLFTWVCL Trigger: CAGACAAACCCACGTAAAGAGACATGCTGTATACAAAACTGTAATCTTAGAAAGTGCCAAGGTCATGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS TCA 72 bp | ACATTGATTTACTTTCCAGCAAACAAGAACATCCTCTaGTGTAACTTAACAGGCAACCATGAAAATCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TLIYFPANKNIL*CNLTGNHENQE Trigger: TTCCTGATTTTCATGGTTGCCTGTTAAGTTACATCAGAGGATGTTCTTGTTTGCTGGAAAGTAAATCAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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| CDS CCA 72 bp | CCTTATTGTCTCACAGTATTTACCACAACTACCGTATaGGCTAATCCTACATCTCTATTTTACAGATTTACA | + |
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Preference number: 6 (lower is better) Translates to: PYCLTVFTTTTV*ANPTSLFYRFT Trigger: TGTAAATCTGTAAAATAGAGATGTAGGATTAGCCCATACGGTAGTTGTGGTAAATACTGTGAGACAATAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565764.1 ENST00000566814.1 |
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| CDS CCA 72 bp | AAGATTACAGTTTTGTATACAGCATGTCTCTTTACGTaGGTTTGTCTGATATATCCTCATGATTACATCCAG | + |
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Preference number: 6 (lower is better) Translates to: KITVLYTACLFT*VCLIYPHDYIQ Trigger: CTGGATGTAATCATGAGGATATATCAGACAAACCCACGTAAAGAGACATGCTGTATACAAAACTGTAATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566814.1 |
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