Pregenerated sensors for TFF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000160182Ensembl transcript IDs: ENST00000291527.3
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCAAAGTCAGAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTaGAGAAGCGTGTCTGAGGTGTCCGGTGGAGGTGGCAGCCGAGCT | + |
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Preference number: 1 (lower is better) Translates to: VKVRAVNLCCEPRHS*RSVSEVSGGGGSRA Trigger: AGCTCGGCTGCCACCTCCACCGGACACCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTCTGACTTTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| 3UTR-3UTR GCA 90 bp | GTAGTCAAAGTCAGAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAGGCACCGCGTCAGGATaGAGGCAGATCCCTGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: VVKVRAVNLCCEPRHSCRGTASG*RQIPAE Trigger: TTCTGCAGGGATCTGCCTGCATCCTGACGCGGTGCC...TCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTCTGACTTTGACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR GCA 90 bp | GTGAGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTGTCCGGTGGAGGTGGCAGGCACCGCGTCAGGATaGAGGCAGATCCCTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VSRGTAAEACLRCPVEVAGTASG*RQIPAE Trigger: TTCTGCAGGGATCTGCCTGCATCCTGACGCGGTGCC...TGCCACCTCCACCGGACACCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CCA 90 bp | TGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTGTCCGGTGGAGGGTGTCCGGTGGAGGTaGCAGCCGAGCTCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: CVVSRGTAAEACLRCPVEGVRWR*QPSSGT Trigger: AGTCCCAGAGCTCGGCTGCCACCTCCACCGGACACC...CTCCACCGGACACCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTCACAACACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR TCA 90 bp | GAGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTGTCCGGTGGAGGTGGCAGCCACACTGGGAGGGCGTaGCACCAGGAAAACCACAAT | + |
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Preference number: 4 (lower is better) Translates to: EPRHSCRSVSEVSGGGGSHTGRA*HQENHN Trigger: ATTGTGGTTTTCCTGGTGTCACGCCCTCCCAGTGTG...GCTGCCACCTCCACCGGACACCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CCA 90 bp | GTCAAAGTCAGAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCTGCCGAGGGCCAGCATaGACACCAGGACCAGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VKVRAVNLCCEPRHSCRSCRGPA*TPGPGR Trigger: GCGCCCTGGTCCTGGTGTCCATGCTGGCCCTCGGCA...GCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTCTGACTTTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR GCA 90 bp | GTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTGTCCCCATTGCCTCCTCTCTaGTCCAAAGGCGACCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: VNLCCEPRHSCRSVSEVSPLPPL*SKGDPE Trigger: CTCGGGGTCGCCTTTGGAGCAGAGAGGAGGCAATGG...GGACACCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCGTGGTACACGTCTCTGTCTaGGCCTCGGCCAGGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: KVRAVNLCCEPRHSCRSVVHVSV*ASARVP Trigger: CGGCACCCTGGCCGAGGCCCAGACAGAGACGTGTAC...CACGCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTCTGACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR TCA 90 bp | GTCAAAGTCAGAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCCTGCAGAAGCGTGTCTaGGGTGTCCGGTGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VKVRAVNLCCEPRHSCRSLQKRV*GVRWRW Trigger: CCACCTCCACCGGACACCTCAGACACGCTTCTGCAG...GCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTCTGACTTTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CCA 90 bp | ATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTGTCCGGTGCCTTGTTCTCCATGGTaGCCATTGCCTCCTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ICVVSRGTAAEACLRCPVPCSPW*PLPPLC Trigger: GCAGAGAGGAGGCAATGGCCACCATGGAGAACAAGG...CACCGGACACCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTCACAACACAGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CCA 90 bp | GAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTCACCTTGTTCTCCATaGTGGCCATTGCCTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: EQSICVVSRGTAAEACLRSPCSP*WPLPPL Trigger: GAGAGGAGGCAATGGCCACCATGGAGAACAAGGTGA...CCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR TCA 90 bp | AAAGTCAGAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCGTGAGTCAATCTGTGTTGTaGGCCGAGGCACAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: KVRAVNLCCEPRHSCRSVSQSVL*AEAQLQ Trigger: CTGCAGCTGTGCCTCGGCTCACAACACAGATTGACT...CACGCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTCTGACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR TCA 90 bp | AGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTGTCCGGTGGAGGTGGCAGCCTTTTTAGGCCAATTTTaGGTAGTCAAAGTCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SRGTAAEACLRCPVEVAAFLGQF*VVKVRA Trigger: TGCTCTGACTTTGACTACTCAAAATTGGCCTAAAAA...GGCTGCCACCTCCACCGGACACCTCAGACACGCTTCTGCAGCTGTGCCTCGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR GCA 90 bp | GTAGTCAAAGTCAGAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAACAGCAGCCCTTATTTaGACACTGGGAGGGCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: VVKVRAVNLCCEPRHSCRTAALI*TLGGRD Trigger: GTCACGCCCTCCCAGTGTGCAAATAAGGGCTGCTGT...TCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTCTGACTTTGACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CCA 90 bp | GTAGTCAAAGTCAGAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGACCCTTATTTGCACACTaGGAGGGCGTGACACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VVKVRAVNLCCEPRHSCRPLFAH*EGVTPG Trigger: TCCTGGTGTCACGCCCTCCCAGTGTGCAAATAAGGG...TCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTCTGACTTTGACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CCA 90 bp | GTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTGTCCTTCACACTCCTCTTCTaGAGGGACGTCGATGGTATT | + |
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Preference number: 4 (lower is better) Translates to: VNLCCEPRHSCRSVSEVSFTLLF*RDVDGI Trigger: AATACCATCGACGTCCCTCCAGAAGAGGAGTGTGAA...GGACACCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS CCA 90 bp | TACACGTCTCTGTCTGGGCCTCGGCCAGGGTGCCGAGGGCCAGCATaGACACCAGGACCAGGGCGCAGATCACCTTGTTCTCCATGGTGG | + |
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Preference number: 5 (lower is better) Translates to: YTSLSGPRPGCRGPA*TPGPGRRSPCSPWW Trigger: CCACCATGGAGAACAAGGTGATCTGCGCCCTGGTCCTGGTGTCCATGCTGGCCCTCGGCACCCTGGCCGAGGCCCAGACAGAGACGTGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CAA 90 bp | CGGTGGAGGTGGCAGCCGAGCTCTGGGACTAATCACCGTGCTGGGGACGGCACCAGGGCGCAGATCACCTaGTTCTCCATGGTGGCCATT | + |
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Preference number: 5 (lower is better) Translates to: RWRWQPSSGTNHRAGDGTRAQIT*FSMVAI Trigger: AATGGCCACCATGGAGAACAAGGTGATCTGCGCCCT...GGTGCCGTCCCCAGCACGGTGATTAGTCCCAGAGCTCGGCTGCCACCTCCACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS CCA 90 bp | GCATGGACACCAGGACCAGGGCGCAGATCACCTTGTTCTCCATGGTaGCCATTGCCTCCTCTCTGCTCCAAAGGCGACCCCGAGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: AWTPGPGRRSPCSPW*PLPPLCSKGDPESG Trigger: CCCTGACTCGGGGTCGCCTTTGGAGCAGAGAGGAGGCAATGGCCACCATGGAGAACAAGGTGATCTGCGCCCTGGTCCTGGTGTCCATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CAA 90 bp | GAGCAGTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTCTCCATGGTGGCCATaGCCTCCTCTCTGCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: EQSICVVSRGTAAEACLRSPWWP*PPLCSK Trigger: TTTGGAGCAGAGAGGAGGCAATGGCCACCATGGAGA...CCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGACTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS CCA 90 bp | ACCCCACGAACGGTGTCGTCGAAACAGCAGCCCTTATTTGCACACTaGGAGGGCGTGACACCAGGAAAACCACAATTCTGTCTTTCACGG | + |
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Preference number: 5 (lower is better) Translates to: TPRTVSSKQQPLFAH*EGVTPGKPQFCLSR Trigger: CCGTGAAAGACAGAATTGTGGTTTTCCTGGTGTCACGCCCTCCCAGTGTGCAAATAAGGGCTGCTGTTTCGACGACACCGTTCGTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS-3UTR CAA 90 bp | GTCAATCTGTGTTGTGAGCCGAGGCACAGCTGCAGAAGCGTGTCTGAGGTGTCCATTTTTAGGCCAATTTaGAGTAGTCAAAGTCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: VNLCCEPRHSCRSVSEVSIFRPI*SSQSQS Trigger: GCTCTGACTTTGACTACTCAAAATTGGCCTAAAAAT...GGACACCTCAGACACGCTTCTGCAGCTGTGCCTCGGCTCACAACACAGATTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS CCA 72 bp | CTGTCTGGGCCTCGGCCAGGGTGCCGAGGGCCAGCATaGACACCAGGACCAGGGCGCAGATCACCTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSGPRPGCRGPA*TPGPGRRSPCS Trigger: AGAACAAGGTGATCTGCGCCCTGGTCCTGGTGTCCATGCTGGCCCTCGGCACCCTGGCCGAGGCCCAGACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS CAA 90 bp | GTGCCGAGGGCCAGCATGGACACCAGGACCAGGGCGCAGATCACCTaGTTCTCCATGGTGGCCATTGCCTCCTCTCTGCTCCAAAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: VPRASMDTRTRAQIT*FSMVAIASSLLQRR Trigger: TCGCCTTTGGAGCAGAGAGGAGGCAATGGCCACCATGGAGAACAAGGTGATCTGCGCCCTGGTCCTGGTGTCCATGCTGGCCCTCGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS CCA 72 bp | CCAGGACCAGGGCGCAGATCACCTTGTTCTCCATGGTaGCCATTGCCTCCTCTCTGCTCCAAAGGCGACCCC | + |
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Preference number: 6 (lower is better) Translates to: PGPGRRSPCSPW*PLPPLCSKGDP Trigger: GGGGTCGCCTTTGGAGCAGAGAGGAGGCAATGGCCACCATGGAGAACAAGGTGATCTGCGCCCTGGTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS CAA 72 bp | GCCAGCATGGACACCAGGACCAGGGCGCAGATCACCTaGTTCTCCATGGTGGCCATTGCCTCCTCTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: ASMDTRTRAQIT*FSMVAIASSLL Trigger: GAGCAGAGAGGAGGCAATGGCCACCATGGAGAACAAGGTGATCTGCGCCCTGGTCCTGGTGTCCATGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS GCA 72 bp | CCCACGAACGGTGTCGTCGAAACAGCAGCCCTTATTTaGACACTGGGAGGGCGTGACACCAGGAAAACCACA | + |
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Preference number: 6 (lower is better) Translates to: PTNGVVETAALI*TLGGRDTRKTT Trigger: TGTGGTTTTCCTGGTGTCACGCCCTCCCAGTGTGCAAATAAGGGCTGCTGTTTCGACGACACCGTTCGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS TCA 72 bp | CGAAACAGCAGCCCTTATTTGCACACTGGGAGGGCGTaGCACCAGGAAAACCACAATTCTGTCTTTCACGGG | + |
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Preference number: 6 (lower is better) Translates to: RNSSPYLHTGRA*HQENHNSVFHG Trigger: CCCGTGAAAGACAGAATTGTGGTTTTCCTGGTGTCACGCCCTCCCAGTGTGCAAATAAGGGCTGCTGTTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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| CDS CCA 72 bp | ACGGTGTCGTCGAAACAGCAGCCCTTATTTGCACACTaGGAGGGCGTGACACCAGGAAAACCACAATTCTGT | + |
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Preference number: 6 (lower is better) Translates to: TVSSKQQPLFAH*EGVTPGKPQFC Trigger: ACAGAATTGTGGTTTTCCTGGTGTCACGCCCTCCCAGTGTGCAAATAAGGGCTGCTGTTTCGACGACACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291527.3 |
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