RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TFEC (Homo sapiens)

Ensembl gene IDs: ENSG00000105967

Ensembl transcript IDs: ENST00000265440.12, ENST00000320239.11, ENST00000393485.5, ENST00000457268.5, ENST00000465322.1, ENST00000474337.5, ENST00000484212.5

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGCTTGGCCCCTGAGACACAGTCAGTTGTTGGCAATAGTCTACTaGATTCTGCTCAGGATGGCTCTGCTGTTTGGTGACATGAGCACC +
Preference number: 1 (lower is better)
Translates to: RAWPLRHSQLLAIVY*ILLRMALLFGDMST
Trigger: GGTGCTCATGTCACCAAACAGCAGAGCCATCCTGAGCAGAATTCAGTAGACTATTGCCAACAACTGACTGTGTCTCAGGGGCCAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393485.5
3UTR TCA 90 bp CTCAGGACTCACTGCAGTTCTGAGTATGCCTCCATGAATACTCATTaGTCGGATGATCACTCTTGGAGGTCCAGCACAGAGCAACGTGCT +
Preference number: 1 (lower is better)
Translates to: LRTHCSSEYASMNTH*SDDHSWRSSTEQRA
Trigger: AGCACGTTGCTCTGTGCTGGACCTCCAAGAGTGATCATCCGATCAATGAGTATTCATGGAGGCATACTCAGAACTGCAGTGAGTCCTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR TCA 90 bp GGCAATAGTCTACTGAATTCTGCTCAGGATGGCTCTGCTGTTTGGTaGCATGAGCACCTAAATCAACCGTGCCAAGTGAAGCCAGGGTTG +
Preference number: 1 (lower is better)
Translates to: GNSLLNSAQDGSAVW*HEHLNQPCQVKPGL
Trigger: CAACCCTGGCTTCACTTGGCACGGTTGATTTAGGTGCTCATGTCACCAAACAGCAGAGCCATCCTGAGCAGAATTCAGTAGACTATTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393485.5
3UTR GCA 90 bp GCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTaGCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAA +
Preference number: 1 (lower is better)
Translates to: AVPSPDLLCPGSIIL*QVLISAKIVKDRFQ
Trigger: TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR TCA 90 bp TTCTACATTTTCTCAGGACTCACTGCAGTTCTGAGTATGCCTCCATaGATACTCATTGATCGGATGATCACTCTTGGAGGTCCAGCACAG +
Preference number: 1 (lower is better)
Translates to: FYIFSGLTAVLSMPP*ILIDRMITLGGPAQ
Trigger: CTGTGCTGGACCTCCAAGAGTGATCATCCGATCAATGAGTATTCATGGAGGCATACTCAGAACTGCAGTGAGTCCTGAGAAAATGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR CCA 90 bp TATCTACTCACAGGAGGTCATCATTATTTTAAGACAATTGGAAGTTaGAAAGGGCTGTTTAATGTGAATCCAAGAAAAAGCAGCCAATAT +
Preference number: 1 (lower is better)
Translates to: YLLTGGHHYFKTIGS*KGLFNVNPRKSSQY
Trigger: ATATTGGCTGCTTTTTCTTGGATTCACATTAAACAGCCCTTTCCAACTTCCAATTGTCTTAAAATAATGATGACCTCCTGTGAGTAGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCGACTCACTGCAGTTCTaGGTATGCCTCCATGAATAC +
Preference number: 2 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCDSLQF*VCLHEY
Trigger: GTATTCATGGAGGCATACTCAGAACTGCAGTGAGTC...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTCTCAGCCAAGATTGTaGAGGATAGATTTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCSQPRL*RIDFKA
Trigger: GGCCTTGAAATCTATCCTTCACAATCTTGGCTGAGA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR CAA 90 bp TCATCACCATCATCTGAGCTAAAGCTACTTCTCCTACTGCTTTCTTaGGAAACTGCAGGGGAAGTGGCAGATAGCAGAGGATCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: SSPSSELKLLLLLLS*ETAGEVADSRGSVP
Trigger: TGGAACAGATCCTCTGCTATCTGCCACTTCCCCTGCAGTTTCCAAAGAAAGCAGTAGGAGAAGTAGCTTTAGCTCAGATGATGGTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393485.5
3UTR-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAAGGCAATGACCACCTaGTATGTTGATCTTGATTCC +
Preference number: 2 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCKAMTT*YVDLDS
Trigger: GGAATCAAGATCAACATATCAGGTGGTCATTGCCTT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAATGGAGAAAGGCAATaGCCACCTGATATGTTGATC +
Preference number: 2 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCNGERQ*PPDMLI
Trigger: GATCAACATATCAGGTGGTCATTGCCTTTCTCCATT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCGAAGAGCAGATAAAATaGGAACTGAAGCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCEEQIK*ELKPVS
Trigger: AGAGACTGGCTTCAGTTCTCATTTTATCTGCTCTTC...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR CAA 90 bp CAGGGGAAGTGGCAGATAGCAGAGGATCTGTTCCAAATGGAGAGATaGTGTCATCCAATAGCATGCCATCCAATCTTTGTTCCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: QGKWQIAEDLFQMER*CHPIACHPIFVPLS
Trigger: TGAAAGAGGAACAAAGATTGGATGGCATGCTATTGGATGACACAATCTCTCCATTTGGAACAGATCCTCTGCTATCTGCCACTTCCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393485.5
3UTR-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAGCCAAAGCAACATATaGAACACAGAGCATAATTGC +
Preference number: 2 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCSQSNI*NTEHNC
Trigger: GCAATTATGCTCTGTGTTTCATATGTTGCTTTGGCT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCATATGTTCCTTTTCCTaGACAGAGACTGGAGATATA +
Preference number: 2 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCICSFS*TETGDI
Trigger: TATATCTCCAGTCTCTGTTCAGGAAAAGGAACATAT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCGACATATTTTCCATGTaGGAAGCAACTAAAAGATCC +
Preference number: 2 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCDIFSM*EATKRS
Trigger: GGATCTTTTAGTTGCTTCTCACATGGAAAATATGTC...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAATCGGATGATCACTCTTaGAGGTCCAGCACAGAGCAA +
Preference number: 2 (lower is better)
Translates to: IILCQVLISAKIVKDRFQSDDHS*RSSTEQ
Trigger: TTGCTCTGTGCTGGACCTCCAAGAGTGATCATCCGA...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAATACTCATTGATCGGATaGTCACTCTTGGAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: IILCQVLISAKIVKDRFQYSLIG*SLLEVQ
Trigger: CTGGACCTCCAAGAGTGATCATCCGATCAATGAGTA...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAGACTCACTGCAGTTCTaGGTATGCCTCCATGAATAC +
Preference number: 2 (lower is better)
Translates to: IILCQVLISAKIVKDRFQDSLQF*VCLHEY
Trigger: GTATTCATGGAGGCATACTCAGAACTGCAGTGAGTC...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR GCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAGAGAAGTCAAATTCTaGTGTTCCCATAAAGTTTGT +
Preference number: 2 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCREVKF*CSHKVC
Trigger: ACAAACTTTATGGGAACAGCAGAATTTGACTTCTCT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR GCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCGGCTCTATCATCCTGTaGCAAGTCCTTATCTCAGCC +
Preference number: 2 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFGSIIL*QVLISA
Trigger: GGCTGAGATAAGGACTTGGCACAGGATGATAGAGCC...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCTCGGATGATCACTCTTaGAGGTCCAGCACAGAGCAA +
Preference number: 2 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFSDDHS*RSSTEQ
Trigger: TTGCTCTGTGCTGGACCTCCAAGAGTGATCATCCGA...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR GCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAACTGTTGTCAGTCTTATaGTTCAGAACTCCCCAACAG +
Preference number: 2 (lower is better)
Translates to: IILCQVLISAKIVKDRFQLLSVL*FRTPQQ
Trigger: CTGTTGGGGAGTTCTGAAGCATAAGACTGACAACAG...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAAAGGCAATGACCACCTaGTATGTTGATCTTGATTCC +
Preference number: 2 (lower is better)
Translates to: IILCQVLISAKIVKDRFQKAMTT*YVDLDS
Trigger: GGAATCAAGATCAACATATCAGGTGGTCATTGCCTT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAAATGGAGAAAGGCAATaGCCACCTGATATGTTGATC +
Preference number: 2 (lower is better)
Translates to: IILCQVLISAKIVKDRFQNGERQ*PPDMLI
Trigger: GATCAACATATCAGGTGGTCATTGCCTTTCTCCATT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTACTCATTGATCGGATaGTCACTCTTGGAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAYSLIG*SLLEVQ
Trigger: CTGGACCTCCAAGAGTGATCATCCGATCAATGAGTA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGACTCACTGCAGTTCTaGGTATGCCTCCATGAATAC +
Preference number: 2 (lower is better)
Translates to: YALTFTQLMPFKEKSNSADSLQF*VCLHEY
Trigger: GTATTCATGGAGGCATACTCAGAACTGCAGTGAGTC...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAGAAGAGCAGATAAAATaGGAACTGAAGCCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: IILCQVLISAKIVKDRFQEEQIK*ELKPVS
Trigger: AGAGACTGGCTTCAGTTCTCATTTTATCTGCTCTTC...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAATGGAGAAAGGCAATaGCCACCTGATATGTTGATC +
Preference number: 2 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFNGERQ*PPDMLI
Trigger: GATCAACATATCAGGTGGTCATTGCCTTTCTCCATT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCTCCATGAATACTCATTaGTCGGATGATCACTCTTGG +
Preference number: 2 (lower is better)
Translates to: PHFHSINAFQREVKFCCSSMNTH*SDDHSW
Trigger: CCAAGAGTGATCATCCGATCAATGAGTATTCATGGA...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAGCCAAAGCAACATATaGAACACAGAGCATAATTGC +
Preference number: 2 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFSQSNI*NTEHNC
Trigger: GCAATTATGCTCTGTGTTTCATATGTTGCTTTGGCT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCATGTGTATGTTTGTGTaGAGGGATACAATTCTGGTC +
Preference number: 2 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFMCMFV*RDTILV
Trigger: GACCAGAATTGTATCCCTTCACACAAACATACACAT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTCCATGAATACTCATTaGTCGGATGATCACTCTTGG +
Preference number: 2 (lower is better)
Translates to: YALTFTQLMPFKEKSNSASMNTH*SDDHSW
Trigger: CCAAGAGTGATCATCCGATCAATGAGTATTCATGGA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAATTCCTGAACAGAGACTaGAGATATAAATATGCATGG +
Preference number: 2 (lower is better)
Translates to: IILCQVLISAKIVKDRFQFLNRD*RYKYAW
Trigger: CCATGCATATTTATATCTCCAGTCTCTGTTCAGGAA...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTAGCCAAAGCAACATATaGAACACAGAGCATAATTGC +
Preference number: 2 (lower is better)
Translates to: YALTFTQLMPFKEKSNSASQSNI*NTEHNC
Trigger: GCAATTATGCTCTGTGTTTCATATGTTGCTTTGGCT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCATATGTTCCTTTTCCTaGACAGAGACTGGAGATATA +
Preference number: 2 (lower is better)
Translates to: PHFHSINAFQREVKFCCSICSFS*TETGDI
Trigger: TATATCTCCAGTCTCTGTTCAGGAAAAGGAACATAT...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTATGTGTATGTTTGTGTaGAGGGATACAATTCTGGTC +
Preference number: 2 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAMCMFV*RDTILV
Trigger: GACCAGAATTGTATCCCTTCACACAAACATACACAT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCGACATATTTTCCATGTaGGAAGCAACTAAAAGATCC +
Preference number: 2 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFDIFSM*EATKRS
Trigger: GGATCTTTTAGTTGCTTCTCACATGGAAAATATGTC...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCTTCCTGAACAGAGACTaGAGATATAAATATGCATGG +
Preference number: 2 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFFLNRD*RYKYAW
Trigger: CCATGCATATTTATATCTCCAGTCTCTGTTCAGGAA...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCTTCCTGAACAGAGACTaGAGATATAAATATGCATGG +
Preference number: 2 (lower is better)
Translates to: PHFHSINAFQREVKFCCSFLNRD*RYKYAW
Trigger: CCATGCATATTTATATCTCCAGTCTCTGTTCAGGAA...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTATATGTTCCTTTTCCTaGACAGAGACTGGAGATATA +
Preference number: 2 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAICSFS*TETGDI
Trigger: TATATCTCCAGTCTCTGTTCAGGAAAAGGAACATAT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR GCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAGAGAAGTCAAATTCTaGTGTTCCCATAAAGTTTGT +
Preference number: 2 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFREVKF*CSHKVC
Trigger: ACAAACTTTATGGGAACAGCAGAATTTGACTTCTCT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR TCA 72 bp GAATTCTGCTCAGGATGGCTCTGCTGTTTGGTGACATaGGCACCTAAATCAACCGTGCCAAGTGAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: EFCSGWLCCLVT*APKSTVPSEAR
Trigger: CCTGGCTTCACTTGGCACGGTTGATTTAGGTGCTCATGTCACCAAACAGCAGAGCCATCCTGAGCAGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393485.5
3UTR TCA 72 bp CCCCTGAGACACAGTCAGTTGTTGGCAATAGTCTACTaGATTCTGCTCAGGATGGCTCTGCTGTTTGGTGAC +
Preference number: 3 (lower is better)
Translates to: PLRHSQLLAIVY*ILLRMALLFGD
Trigger: GTCACCAAACAGCAGAGCCATCCTGAGCAGAATTCAGTAGACTATTGCCAACAACTGACTGTGTCTCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393485.5
3UTR CCA 72 bp AGAAAAGGCTATAGCTTGATCACAGAGCTCAGGGCTTaGCCCCTGAGACACAGTCAGTTGTTGGCAATAGTC +
Preference number: 3 (lower is better)
Translates to: RKGYSLITELRA*PLRHSQLLAIV
Trigger: GACTATTGCCAACAACTGACTGTGTCTCAGGGGCCAAGCCCTGAGCTCTGTGATCAAGCTATAGCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393485.5
3UTR-3UTR CAA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCGGCCTTCACAACCTGTaGTCAGTCTTATGCTTCAGA +
Preference number: 3 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCGLHNL*SVLCFR
Trigger: TCTGAAGCATAAGACTGACAACAGGTTGTGAAGGCC...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR TCA 72 bp CACTGCAGTTCTGAGTATGCCTCCATGAATACTCATTaGTCGGATGATCACTCTTGGAGGTCCAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: HCSSEYASMNTH*SDDHSWRSSTE
Trigger: CTCTGTGCTGGACCTCCAAGAGTGATCATCCGATCAATGAGTATTCATGGAGGCATACTCAGAACTGCAGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR TCA 72 bp CTACTGAATTCTGCTCAGGATGGCTCTGCTGTTTGGTaGCATGAGCACCTAAATCAACCGTGCCAAGTGAAG +
Preference number: 3 (lower is better)
Translates to: LLNSAQDGSAVW*HEHLNQPCQVK
Trigger: CTTCACTTGGCACGGTTGATTTAGGTGCTCATGTCACCAAACAGCAGAGCCATCCTGAGCAGAATTCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393485.5
3UTR GCA 72 bp TCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTaGCAAGTCCTTATCTCAGCCAAGATTGTGAAGGAT +
Preference number: 3 (lower is better)
Translates to: SPDLLCPGSIIL*QVLISAKIVKD
Trigger: ATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR TCA 72 bp TTCTCAGGACTCACTGCAGTTCTGAGTATGCCTCCATaGATACTCATTGATCGGATGATCACTCTTGGAGGT +
Preference number: 3 (lower is better)
Translates to: FSGLTAVLSMPP*ILIDRMITLGG
Trigger: ACCTCCAAGAGTGATCATCCGATCAATGAGTATTCATGGAGGCATACTCAGAACTGCAGTGAGTCCTGAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR GCA 72 bp TTTTCTAAGGGCCTTCACAACCTGTTGTCAGTCTTATaGTTCAGAACTCCCCAACAGACATCTTCTAGGGCA +
Preference number: 3 (lower is better)
Translates to: FSKGLHNLLSVL*FRTPQQTSSRA
Trigger: TGCCCTAGAAGATGTCTGTTGGGGAGTTCTGAAGCATAAGACTGACAACAGGTTGTGAAGGCCCTTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CAA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAGAATTGCTTTCCAGTaGATGAATTGGGTCTGTTTA +
Preference number: 3 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCRIAFQ*MNWVCL
Trigger: TAAACAGACCCAATTCATCAACTGGAAAGCAATTCT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCGGCCTTCACAACCTGTaGTCAGTCTTATGCTTCAGA +
Preference number: 3 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFGLHNL*SVLCFR
Trigger: TCTGAAGCATAAGACTGACAACAGGTTGTGAAGGCC...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CAA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAACAGTCGTTTAACACTTaGCAGTCATTAGTTCCAGTA +
Preference number: 3 (lower is better)
Translates to: IILCQVLISAKIVKDRFQQSFNT*QSLVPV
Trigger: TACTGGAACTAATGACTGCAAAGTGTTAAACGACTG...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCAGTCGTTTAACACTTaGCAGTCATTAGTTCCAGTA +
Preference number: 3 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFQSFNT*QSLVPV
Trigger: TACTGGAACTAATGACTGCAAAGTGTTAAACGACTG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR GCA 72 bp CAGATGAGAAGTGACTTAATATACACTGTCACAACATaGCTTGAGGCAATGAAATCCATAGCAATGTTGGAA +
Preference number: 3 (lower is better)
Translates to: QMRSDLIYTVTT*LEAMKSIAMLE
Trigger: TTCCAACATTGCTATGGATTTCATTGCCTCAAGGCATGTTGTGACAGTGTATATTAAGTCACTTCTCATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393485.5
3UTR-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAGAATTGCTTTCCAGTaGATGAATTGGGTCTGTTTA +
Preference number: 3 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFRIAFQ*MNWVCL
Trigger: TAAACAGACCCAATTCATCAACTGGAAAGCAATTCT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTCAGTCGTTTAACACTTaGCAGTCATTAGTTCCAGTA +
Preference number: 3 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAQSFNT*QSLVPV
Trigger: TACTGGAACTAATGACTGCAAAGTGTTAAACGACTG...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCATCAACCGTGCCAAGTaGAGCCAGGGTTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCINRAK*SQGWQT
Trigger: GGTCTGCCAACCCTGGCTTCACTTGGCACGGTTGAT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTCAGGGCTTGGCCCCTaGGACACAGTCAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCSGLGP*DTVSCW
Trigger: CCAACAACTGACTGTGTCTCAGGGGCCAAGCCCTGA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCGTCCAGAGTTGTGTGTaGATGCTGCACAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCVQSCV*MLHKRP
Trigger: GGGCCTCTTGTGCAGCATGCACACACAACTCTGGAC...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTGGGCTTTCTGTAGCTaGGGCCTTGCAGAACTTTCC +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCWAFCS*GLAELS
Trigger: GGAAAGTTCTGCAAGGCCTCAGCTACAGAAAGCCCA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR GCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCGGCTCTATCATCCTGTaGCAAGTCCTTATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCGSIIL*QVLISA
Trigger: GGCTGAGATAAGGACTTGGCACAGGATGATAGAGCC...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTCGGATGATCACTCTTaGAGGTCCAGCACAGAGCAA +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCSDDHS*RSSTEQ
Trigger: TTGCTCTGTGCTGGACCTCCAAGAGTGATCATCCGA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR CAA 72 bp GAGCACCTAAATCAACCGTGCCAAGTGAAGCCAGGGTaGGCAGACCATGAGTACGAGCCTGAATTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: EHLNQPCQVKPG*ADHEYEPEFLV
Trigger: AACTAGAAATTCAGGCTCGTACTCATGGTCTGCCAACCCTGGCTTCACTTGGCACGGTTGATTTAGGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393485.5
CDS-3UTR CCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCGAATTCTGCTCAGGATaGCTCTGCTGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCEFCSG*LCCLVT
Trigger: TGTCACCAAACAGCAGAGCCATCCTGAGCAGAATTC...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTCCTACTGCTTTCTTTaGAAACTGCAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCSYCFL*KLQGKW
Trigger: CCACTTCCCCTGCAGTTTCCAAAGAAAGCAGTAGGA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTGCTGGGACCAGCAATaGGTGGATTTTATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCCWDQQ*VDFISV
Trigger: AACACTGATAAAATCCACTCATTGCTGGTCCCAGCA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCCCCCATGTTAATTGGTaGAATTCCTTGTTCACCGCT +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCPHVNW*NSLFTA
Trigger: AGCGGTGAACAAGGAATTTCACCAATTAACATGGGG...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAATCAACCGTGCCAAGTaGAGCCAGGGTTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQINRAK*SQGWQT
Trigger: GGTCTGCCAACCCTGGCTTCACTTGGCACGGTTGAT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAATCAGGGCTTGGCCCCTaGGACACAGTCAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQSGLGP*DTVSCW
Trigger: CCAACAACTGACTGTGTCTCAGGGGCCAAGCCCTGA...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAGAAACCCAGATGGTTaGTCTTGCGCTGATAACACA +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCRNPDG*SCADNT
Trigger: TGTGTTATCAGCGCAAGATCAACCATCTGGGTTTCT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCCTTTTTGTAGCCACTTaGTGTACTCCACTGATGCTT +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCLFVAT*CTPLML
Trigger: AAGCATCAGTGGAGTACATCAAGTGGCTACAAAAAG...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCATCAACCGTGCCAAGTaGAGCCAGGGTTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFINRAK*SQGWQT
Trigger: GGTCTGCCAACCCTGGCTTCACTTGGCACGGTTGAT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTCCATGAATACTCATTaGTCGGATGATCACTCTTGG +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCSMNTH*SDDHSW
Trigger: CCAAGAGTGATCATCCGATCAATGAGTATTCATGGA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAGCTACTTCTCCTACTaGTTTCTTTGGAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCSYFSY*FLWKLQ
Trigger: CTGCAGTTTCCAAAGAAAGCAGTAGGAGAAGTAGCT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCGATGATCAAGGGTCATaGAAGAGTTTACTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCDDQGS*KSLLSV
Trigger: GACAGAAAGTAAACTCTTTCATGACCCTTGATCATC...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR TCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCATGTGTATGTTTGTGTaGAGGGATACAATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCMCMFV*RDTILV
Trigger: GACCAGAATTGTATCCCTTCACACAAACATACACAT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAGTTGTGTGTGCATGCTaGACAAGAGGCCCACCACTT +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQVVCAC*TRGPPL
Trigger: AAGTGGTGGGCCTCTTGTGCAGCATGCACACACAAC...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR GCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCGTCCAGAGTTGTGTGTaGATGCTGCACAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFVQSCV*MLHKRP
Trigger: GGGCCTCTTGTGCAGCATGCACACACAACTCTGGAC...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR GCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTGTCATCCAATAGCATaGCATCCAATCTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCCHPIA*HPIFVP
Trigger: AGGAACAAAGATTGGATGGCATGCTATTGGATGACA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCGTTGTGTGTGCATGCTaGACAAGAGGCCCACCACTT +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFVVCAC*TRGPPL
Trigger: AAGTGGTGGGCCTCTTGTGCAGCATGCACACACAAC...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR GCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAGGCTCTATCATCCTGTaGCAAGTCCTTATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQGSIIL*QVLISA
Trigger: GGCTGAGATAAGGACTTGGCACAGGATGATAGAGCC...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAATTTTAGCCTTGTATaGCATAAGCAACTGCTATGC +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCNFSLV*HKQLLC
Trigger: GCATAGCAGTTGCTTATGGCATACAAGGCTAAAATT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTTCCTGAACAGAGACTaGAGATATAAATATGCATGG +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCFLNRD*RYKYAW
Trigger: CCATGCATATTTATATCTCCAGTCTCTGTTCAGGAA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAAGACAATTGGAAGTTaGAAAGGGCTGTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCKTIGS*KGLFNV
Trigger: CACATTAAACAGCCCTTTCCAACTTCCAATTGTCTT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTGGGCTTTCTGTAGCTaGGGCCTTGCAGAACTTTCC +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAWAFCS*GLAELS
Trigger: GGAAAGTTCTGCAAGGCCTCAGCTACAGAAAGCCCA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAATGCTGTTTGGTGACATaGGCACCTAAATCAACCGTG +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQCCLVT*APKSTV
Trigger: CACGGTTGATTTAGGTGCTCATGTCACCAAACAGCA...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAGGCTCTGCTGTTTGGTaGCATGAGCACCTAAATCAA +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQGSAVW*HEHLNQ
Trigger: TTGATTTAGGTGCTCATGTCACCAAACAGCAGAGCC...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCCACCTAAATCAACCGTaGCAAGTGAAGCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSHLNQP*QVKPGL
Trigger: CAACCCTGGCTTCACTTGGCACGGTTGATTTAGGTG...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCACCTAAATCAACCGTaGCAAGTGAAGCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFHLNQP*QVKPGL
Trigger: CAACCCTGGCTTCACTTGGCACGGTTGATTTAGGTG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAGAATTCTGCTCAGGATaGCTCTGCTGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQEFCSG*LCCLVT
Trigger: TGTCACCAAACAGCAGAGCCATCCTGAGCAGAATTC...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCCAGGAATTTTTCACTTaGGATCCAAGAAAACATTCA +
Preference number: 4 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCQEFFT*DPRKHS
Trigger: TGAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTG...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR CAA 72 bp CGCACACCTAAGAGACCTGATTCAGGAATTTTTCACTaGGGATCCAAGAAAACATTCAGGAGATCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: RTPKRPDSGIFH*GSKKTFRRSLR
Trigger: TCTTAGGGATCTCCTGAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCGGCTCTGCTGTTTGGTaGCATGAGCACCTAAATCAA +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFGSAVW*HEHLNQ
Trigger: TTGATTTAGGTGCTCATGTCACCAAACAGCAGAGCC...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAATTGGCAATAGTCTACTaGATTCTGCTCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQLAIVY*ILLRMA
Trigger: AGCCATCCTGAGCAGAATTCAGTAGACTATTGCCAA...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCTACTCATTGATCGGATaGTCACTCTTGGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFYSLIG*SLLEVQ
Trigger: CTGGACCTCCAAGAGTGATCATCCGATCAATGAGTA...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCGACTCACTGCAGTTCTaGGTATGCCTCCATGAATAC +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFDSLQF*VCLHEY
Trigger: GTATTCATGGAGGCATACTCAGAACTGCAGTGAGTC...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAAGTCGCCTGTTAGCCTaGTCTAATTTCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQSRLLA*SNFFCL
Trigger: CAGACAGAAGAAATTAGAGCAGGCTAACAGGCGACT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCTCCTACTGCTTTCTTTaGAAACTGCAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFSYCFL*KLQGKW
Trigger: CCACTTCCCCTGCAGTTTCCAAAGAAAGCAGTAGGA...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTCGGATGATCACTCTTaGAGGTCCAGCACAGAGCAA +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSASDDHS*RSSTEQ
Trigger: TTGCTCTGTGCTGGACCTCCAAGAGTGATCATCCGA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCTGCTGGGACCAGCAATaGGTGGATTTTATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSCWDQQ*VDFISV
Trigger: AACACTGATAAAATCCACTCATTGCTGGTCCCAGCA...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCTGGCACTGCAGGTTGTaGCCATTTAAGAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFWHCRL*PFKSWI
Trigger: AATCCAACTCTTAAATGGTCACAACCTGCAGTGCCA...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCCCCATGTTAATTGGTaGAATTCCTTGTTCACCGCT +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFPHVNW*NSLFTA
Trigger: AGCGGTGAACAAGGAATTTCACCAATTAACATGGGG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTGCTGTTTGGTGACATaGGCACCTAAATCAACCGTG +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSACCLVT*APKSTV
Trigger: CACGGTTGATTTAGGTGCTCATGTCACCAAACAGCA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGGCTCTGCTGTTTGGTaGCATGAGCACCTAAATCAA +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAGSAVW*HEHLNQ
Trigger: TTGATTTAGGTGCTCATGTCACCAAACAGCAGAGCC...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCTTGGCAATAGTCTACTaGATTCTGCTCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFLAIVY*ILLRMA
Trigger: AGCCATCCTGAGCAGAATTCAGTAGACTATTGCCAA...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCTCTCAGCCAAGATTGTaGAGGATAGATTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSSQPRL*RIDFKA
Trigger: GGCCTTGAAATCTATCCTTCACAATCTTGGCTGAGA...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAGAAAGCCATGGTCACTaGTATGCCTATAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQESHGH*YAYKLR
Trigger: TCTCAGTTTATAGGCATATCAGTGACCATGGCTTTC...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAGAAACCCAGATGGTTaGTCTTGCGCTGATAACACA +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFRNPDG*SCADNT
Trigger: TGTGTTATCAGCGCAAGATCAACCATCTGGGTTTCT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCAGTCGCCTGTTAGCCTaGTCTAATTTCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSSRLLA*SNFFCL
Trigger: CAGACAGAAGAAATTAGAGCAGGCTAACAGGCGACT...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAGTCGCCTGTTAGCCTaGTCTAATTTCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFSRLLA*SNFFCL
Trigger: CAGACAGAAGAAATTAGAGCAGGCTAACAGGCGACT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAAGCTACTTCTCCTACTaGTTTCTTTGGAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQSYFSY*FLWKLQ
Trigger: CTGCAGTTTCCAAAGAAAGCAGTAGGAGAAGTAGCT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAGGGACCAGCAATGAGTaGATTTTATCAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQGTSNE*ILSVLS
Trigger: TGACAACACTGATAAAATCCACTCATTGCTGGTCCC...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR CCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTCCTACTGCTTTCTTTaGAAACTGCAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSASYCFL*KLQGKW
Trigger: CCACTTCCCCTGCAGTTTCCAAAGAAAGCAGTAGGA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTGGCACTGCAGGTTGTaGCCATTTAAGAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAWHCRL*PFKSWI
Trigger: AATCCAACTCTTAAATGGTCACAACCTGCAGTGCCA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCTTTTTGTAGCCACTTaGTGTACTCCACTGATGCTT +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFLFVAT*CTPLML
Trigger: AAGCATCAGTGGAGTACATCAAGTGGCTACAAAAAG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTTGGCAATAGTCTACTaGATTCTGCTCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSALAIVY*ILLRMA
Trigger: AGCCATCCTGAGCAGAATTCAGTAGACTATTGCCAA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAAGCCAAAGCAACATATaGAACACAGAGCATAATTGC +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQSQSNI*NTEHNC
Trigger: GCAATTATGCTCTGTGTTTCATATGTTGCTTTGGCT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCAAGGCAATGACCACCTaGTATGTTGATCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSKAMTT*YVDLDS
Trigger: GGAATCAAGATCAACATATCAGGTGGTCATTGCCTT...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCGAAGAGCAGATAAAATaGGAACTGAAGCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSEEQIK*ELKPVS
Trigger: AGAGACTGGCTTCAGTTCTCATTTTATCTGCTCTTC...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTCTCAGCCAAGATTGTaGAGGATAGATTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSASQPRL*RIDFKA
Trigger: GGCCTTGAAATCTATCCTTCACAATCTTGGCTGAGA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTAGAAACCCAGATGGTTaGTCTTGCGCTGATAACACA +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSARNPDG*SCADNT
Trigger: TGTGTTATCAGCGCAAGATCAACCATCTGGGTTTCT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCTCCATATGCCATTGTaGATTGTCATCTTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFLHMPL*IVIFFP
Trigger: GGGAAAGAAGATGACAATGCACAATGGCATATGGAG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265440.12
CDS-3UTR GCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAATAACGTCCTCCATATaGCATTGTGCATTGTCATCT +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQITSSI*HCALSS
Trigger: AGATGACAATGCACAATGGCATATGGAGGACGTTAT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265440.12
CDS-3UTR GCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAGCTACTTCTCCTACTaGTTTCTTTGGAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFSYFSY*FLWKLQ
Trigger: CTGCAGTTTCCAAAGAAAGCAGTAGGAGAAGTAGCT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTCTGTTGTCAGTCTTATaGTTCAGAACTCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSALLSVL*FRTPQQ
Trigger: CTGTTGGGGAGTTCTGAAGCATAAGACTGACAACAG...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCGGGACCAGCAATGAGTaGATTTTATCAGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSGTSNE*ILSVLS
Trigger: TGACAACACTGATAAAATCCACTCATTGCTGGTCCC...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR CCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAAGGATCATTAGACTTTaGAATAAGAGTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQRIIRL*NKSAKL
Trigger: GAGCTTGGCACTCTTATTCCAAAGTCTAATGATCCT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTCTTTTTGTAGCCACTTaGTGTACTCCACTGATGCTT +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSALFVAT*CTPLML
Trigger: AAGCATCAGTGGAGTACATCAAGTGGCTACAAAAAG...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTAAGGCAATGACCACCTaGTATGTTGATCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAKAMTT*YVDLDS
Trigger: GGAATCAAGATCAACATATCAGGTGGTCATTGCCTT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCATGTGTATGTTTGTGTaGAGGGATACAATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSMCMFV*RDTILV
Trigger: GACCAGAATTGTATCCCTTCACACAAACATACACAT...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCTTAATGTATTTCAGTTaGCCGGGACACAGCATAACT +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSLMYFS*PGHSIT
Trigger: AGTTATGCTGTGTCCCGGTCAACTGAAATACATTAA...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCTTAATGTATTTCAGTTaGCCGGGACACAGCATAACT +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFLMYFS*PGHSIT
Trigger: AGTTATGCTGTGTCCCGGTCAACTGAAATACATTAA...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGAAAGCCATGGTCACTaGTATGCCTATAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAESHGH*YAYKLR
Trigger: TCTCAGTTTATAGGCATATCAGTGACCATGGCTTTC...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAACATCAATGCACAATaGTTACAGGAGGCTCATGTA +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFNINAQ*LQEAHV
Trigger: TACATGAGCCTCCTGTAATCATTGTGCATTGATGTT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCTGTCATCCAATAGCATaGCATCCAATCTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSCHPIA*HPIFVP
Trigger: AGGAACAAAGATTGGATGGCATGCTATTGGATGACA...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCAGGATCATTAGACTTTaGAATAAGAGTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSRIIRL*NKSAKL
Trigger: GAGCTTGGCACTCTTATTCCAAAGTCTAATGATCCT...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAGGATCATTAGACTTTaGAATAAGAGTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFRIIRL*NKSAKL
Trigger: GAGCTTGGCACTCTTATTCCAAAGTCTAATGATCCT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAAAGACAATTGGAAGTTaGAAAGGGCTGTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQKTIGS*KGLFNV
Trigger: CACATTAAACAGCCCTTTCCAACTTCCAATTGTCTT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCATATGTTCCTTTTCCTaGACAGAGACTGGAGATATA +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFICSFS*TETGDI
Trigger: TATATCTCCAGTCTCTGTTCAGGAAAAGGAACATAT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCGACATATTTTCCATGTaGGAAGCAACTAAAAGATCC +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSDIFSM*EATKRS
Trigger: GGATCTTTTAGTTGCTTCTCACATGGAAAATATGTC...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTAACATCAATGCACAATaGTTACAGGAGGCTCATGTA +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSANINAQ*LQEAHV
Trigger: TACATGAGCCTCCTGTAATCATTGTGCATTGATGTT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR TCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTGGAATCCAGTTAGTTaGGGAAAGAGAAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAWNPVS*GKRKEK
Trigger: CTTCTCTTTTCTCTTTCCTCAACTAACTGGATTCCA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320239.11
CDS-3UTR GCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTCCAGATAATGTTCTTTaGATTAGCAGAGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAPDNVL*ISRGES
Trigger: AGACTCTCCTCTGCTAATGCAAAGAACATTATCTGG...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265440.12
CDS-3UTR GCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCAATTTTAGCCTTGTATaGCATAAGCAACTGCTATGC +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSNFSLV*HKQLLC
Trigger: GCATAGCAGTTGCTTATGGCATACAAGGCTAAAATT...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAAGACAATTGGAAGTTaGAAAGGGCTGTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFKTIGS*KGLFNV
Trigger: CACATTAAACAGCCCTTTCCAACTTCCAATTGTCTT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAACTTCATCATTAAGTTaGTTGAATCCTGGGAGATAT +
Preference number: 4 (lower is better)
Translates to: IILCQVLISAKIVKDRFQTSSLS*LNPGRY
Trigger: ATATCTCCCAGGATTCAACCAACTTAATGATGAAGT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
3UTR CAA 72 bp GAAACTGACCCATATATAATAAATAGAAGGCATAGTTaGCTGAGTGGGGAGGACATGTTTGATAAACGACTA +
Preference number: 4 (lower is better)
Translates to: ETDPYIINRRHS*LSGEDMFDKRL
Trigger: TAGTCGTTTATCAAACATGTCCTCCCCACTCAGCAAACTATGCCTTCTATTTATTATATATGGGTCAGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCAGAGAAGTCAAATTCTaGTGTTCCCATAAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: PHFHSINAFQREVKFCCSREVKF*CSHKVC
Trigger: ACAAACTTTATGGGAACAGCAGAATTTGACTTCTCT...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCAGGAATTTTTCACTTaGGATCCAAGAAAACATTCA +
Preference number: 4 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFQEFFT*DPRKHS
Trigger: TGAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR GCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTATACTTCCAGATAAATaGCATTGTGCATTGTCATCT +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAILPDK*HCALSS
Trigger: AGATGACAATGCACAATGGCATTTATCTGGAAGTAT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320239.11
CDS-3UTR CCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTCAGGAATTTTTCACTTaGGATCCAAGAAAACATTCA +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAQEFFT*DPRKHS
Trigger: TGAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTG...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CCA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTACTTCATCATTAAGTTaGTTGAATCCTGGGAGATAT +
Preference number: 4 (lower is better)
Translates to: YALTFTQLMPFKEKSNSATSSLS*LNPGRY
Trigger: ATATCTCCCAGGATTCAACCAACTTAATGATGAAGT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS GCA 90 bp GGGTTTTCTGTGAGGCCAGCATCACTGTCCAGAGTTGTGTGTGCATaGTGCACAAGAGGCCCACCACTTGGCACTGCAGGTTGTGACCAT +
Preference number: 5 (lower is better)
Translates to: GFSVRPASLSRVVCA*CTRGPPLGTAGCDH
Trigger: ATGGTCACAACCTGCAGTGCCAAGTGGTGGGCCTCTTGTGCAGCATGCACACACAACTCTGGACAGTGATGCTGGCCTCACAGAAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000393485.5
ENST00000484212.5
CDS GCA 90 bp TTTTCTGTGAGGCCAGCATCACTGTCCAGAGTTGTGTGTGCATGCTaGACAAGAGGCCCACCACTTGGCACTGCAGGTTGTGACCATTTA +
Preference number: 5 (lower is better)
Translates to: FSVRPASLSRVVCAC*TRGPPLGTAGCDHL
Trigger: TAAATGGTCACAACCTGCAGTGCCAAGTGGTGGGCCTCTTGTGCAGCATGCACACACAACTCTGGACAGTGATGCTGGCCTCACAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000393485.5
ENST00000484212.5
CDS GCA 90 bp CAGTCAGGCTTTTTCTGCCCATTCATAGCAGCATGGCATCACCTTTaGTGGTGGCTCAGGCGAAGAATCCGTGAGACTCAATCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: QSGFFCPFIAAWHHL*WWLRRRIRETQSLH
Trigger: ATGGAGAGATTGAGTCTCACGGATTCTTCGCCTGAGCCACCAGCAAAGGTGATGCCATGCTGCTATGAATGGGCAGAAAAAGCCTGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS CCA 90 bp TCAGGCTTTTTCTGCCCATTCATAGCAGCATGGCATCACCTTTGCTaGTGGCTCAGGCGAAGAATCCGTGAGACTCAATCTCTCCATTTG +
Preference number: 5 (lower is better)
Translates to: SGFFCPFIAAWHHLC*WLRRRIRETQSLHL
Trigger: CAAATGGAGAGATTGAGTCTCACGGATTCTTCGCCTGAGCCACCAGCAAAGGTGATGCCATGCTGCTATGAATGGGCAGAAAAAGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS CCA 90 bp AAGTCACTAGTTCAGTCAGGCTTTTTCTGCCCATTCATAGCAGCATaGCATCACCTTTGCTGGTGGCTCAGGCGAAGAATCCGTGAGACT +
Preference number: 5 (lower is better)
Translates to: KSLVQSGFFCPFIAA*HHLCWWLRRRIRET
Trigger: AGTCTCACGGATTCTTCGCCTGAGCCACCAGCAAAGGTGATGCCATGCTGCTATGAATGGGCAGAAAAAGCCTGACTGAACTAGTGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS-3UTR CAA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCCTCCTACTGCTTTCTTaGGAAACTGCAGGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCLLLLS*ETAGEV
Trigger: CACTTCCCCTGCAGTTTCCAAAGAAAGCAGTAGGAG...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS CCA 90 bp GGCTTTTTCTGCCCATTCATAGCAGCATGGCATCACCTTTGCTGGTaGCTCAGGCGAAGAATCCGTGAGACTCAATCTCTCCATTTGTTT +
Preference number: 5 (lower is better)
Translates to: GFFCPFIAAWHHLCW*LRRRIRETQSLHLF
Trigger: AAACAAATGGAGAGATTGAGTCTCACGGATTCTTCGCCTGAGCCACCAGCAAAGGTGATGCCATGCTGCTATGAATGGGCAGAAAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS-3UTR CAA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCAGAAAAGGCTATAGCTaGATCACAGAGCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCRKGYS*ITELRA
Trigger: AGCCCTGAGCTCTGTGATCAAGCTATAGCCTTTTCT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCAAGAGGCCCACCACTaGGCACTGCAGGTTGTGACC +
Preference number: 5 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFQEAHH*ALQVVT
Trigger: GGTCACAACCTGCAGTGCCAAGTGGTGGGCCTCTTG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR CAA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTCTTTTTGTAGCCACTaGATGTACTCCACTGATGCT +
Preference number: 5 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCSFCSH*MYSTDA
Trigger: AGCATCAGTGGAGTACATCAAGTGGCTACAAAAAGA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAACAAGTGAAGCCAGGGTaGGCAGACCATGAGTACGAG +
Preference number: 5 (lower is better)
Translates to: IILCQVLISAKIVKDRFQQVKPG*ADHEYE
Trigger: CTCGTACTCATGGTCTGCCAACCCTGGCTTCACTTG...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCAAGTGAAGCCAGGGTaGGCAGACCATGAGTACGAG +
Preference number: 5 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFQVKPG*ADHEYE
Trigger: CTCGTACTCATGGTCTGCCAACCCTGGCTTCACTTG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCATAGTCCCATTACAGTaGATGCTTTTTGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCIVPLQ*MLFVTA
Trigger: TGCTGTCACAAAAAGCATCAACTGTAATGGGACTAT...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCCCCTCTCCAGATCTCTaGTGTCCAGGCTCTATCATC +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSPSPDL*CPGSII
Trigger: GATGATAGAGCCTGGACACAAGAGATCTGGAGAGGG...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCCCTCTCCAGATCTCTaGTGTCCAGGCTCTATCATC +
Preference number: 5 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFPSPDL*CPGSII
Trigger: GATGATAGAGCCTGGACACAAGAGATCTGGAGAGGG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTCAGGAATTTTTCACTaGGGATCCAAGAAAACATTC +
Preference number: 5 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCSGIFH*GSKKTF
Trigger: GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CAAATAGCAGTTCCCTCTCCAGATCTCTTGTGTCCAGGCTCTATCATCCTGTGCTACTTCATCATTAAGTaGGTTGAATCCTGGGAGATA +
Preference number: 5 (lower is better)
Translates to: QIAVPSPDLLCPGSIILCYFIIK*VESWEI
Trigger: TATCTCCCAGGATTCAACCAACTTAATGATGAAGTA...GCACAGGATGATAGAGCCTGGACACAAGAGATCTGGAGAGGGAACTGCTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS GCA 90 bp TCTCTACAAACAGCACCAAATTATAATCCCTCTTCCCATAACATATaGACCATGCCAGAAGGGACAACCAAAGTAAACGATCTAGCCGTG +
Preference number: 5 (lower is better)
Translates to: SLQTAPNYNPSSHNI*TMPEGTTKVNDLAV
Trigger: CACGGCTAGATCGTTTACTTTGGTTGTCCCTTCTGGCATGGTGCATATGTTATGGGAAGAGGGATTATAATTTGGTGCTGTTTGTAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCCATCACTGTCCAGAGTaGTGTGTGCATGCTGCACAA +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSHHCPE*CVHAAQ
Trigger: TTGTGCAGCATGCACACACAACTCTGGACAGTGATG...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR CAA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAAGAAAAGGCTATAGCTaGATCACAGAGCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: IILCQVLISAKIVKDRFQRKGYS*ITELRA
Trigger: AGCCCTGAGCTCTGTGATCAAGCTATAGCCTTTTCT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCTCCTACTGCTTTCTTaGGAAACTGCAGGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFLLLLS*ETAGEV
Trigger: CACTTCCCCTGCAGTTTCCAAAGAAAGCAGTAGGAG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAAATAGAAGGCATAGTTaGCTGAGTGGGGAGGACATG +
Preference number: 5 (lower is better)
Translates to: IILCQVLISAKIVKDRFQNRRHS*LSGEDM
Trigger: CATGTCCTCCCCACTCAGCAAACTATGCCTTCTATT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS CCA 90 bp AGCTTGTTCTGTGTTTGTAGAACCCCTGTGTTTCAGGGAAGAAGATaGGCTGCTATTCCATATAACTTTTTCTCGGATAACCAAGACTTC +
Preference number: 5 (lower is better)
Translates to: SLFCVCRTPVFQGRR*AAIPYNFFSDNQDF
Trigger: GAAGTCTTGGTTATCCGAGAAAAAGTTATATGGAATAGCAGCCCATCTTCTTCCCTGAAACACAGGGGTTCTACAAACACAGAACAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS-3UTR CAA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAACCAATAGCTAGTAACTaGGTGAGTGGGTTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: IILCQVLISAKIVKDRFQPIASN*VSGFSV
Trigger: CACAGAAAACCCACTCACCAAGTTACTAGCTATTGG...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCAGAAAAGGCTATAGCTaGATCACAGAGCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFRKGYS*ITELRA
Trigger: AGCCCTGAGCTCTGTGATCAAGCTATAGCCTTTTCT...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAACATGCCATCCAATCTTaGTTCCTCTTTCAATGCAGC +
Preference number: 5 (lower is better)
Translates to: IILCQVLISAKIVKDRFQHAIQS*FLFQCS
Trigger: GCTGCATTGAAAGAGGAACAAAGATTGGATGGCATG...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTCTCCTACTGCTTTCTTaGGAAACTGCAGGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSALLLLS*ETAGEV
Trigger: CACTTCCCCTGCAGTTTCCAAAGAAAGCAGTAGGAG...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCGGCCTTCACAACCTGTaGTCAGTCTTATGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSGLHNL*SVLCFR
Trigger: TCTGAAGCATAAGACTGACAACAGGTTGTGAAGGCC...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCCCAATAGCTAGTAACTaGGTGAGTGGGTTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFPIASN*VSGFSV
Trigger: CACAGAAAACCCACTCACCAAGTTACTAGCTATTGG...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR CAA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAGTCCTCCATATGCCATaGTGCATTGTCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: IILCQVLISAKIVKDRFQVLHMP*CIVIFF
Trigger: AAAGAAGATGACAATGCACAATGGCATATGGAGGAC...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265440.12
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCCATGCCATCCAATCTTaGTTCCTCTTTCAATGCAGC +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSHAIQS*FLFQCS
Trigger: GCTGCATTGAAAGAGGAACAAAGATTGGATGGCATG...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGGCCTTCACAACCTGTaGTCAGTCTTATGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAGLHNL*SVLCFR
Trigger: TCTGAAGCATAAGACTGACAACAGGTTGTGAAGGCC...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTAATAGAAGGCATAGTTaGCTGAGTGGGGAGGACATG +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSANRRHS*LSGEDM
Trigger: CATGTCCTCCCCACTCAGCAAACTATGCCTTCTATT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCTCTTTTTGTAGCCACTaGATGTACTCCACTGATGCT +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSSFCSH*MYSTDA
Trigger: AGCATCAGTGGAGTACATCAAGTGGCTACAAAAAGA...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCTCTTTTTGTAGCCACTaGATGTACTCCACTGATGCT +
Preference number: 5 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFSFCSH*MYSTDA
Trigger: AGCATCAGTGGAGTACATCAAGTGGCTACAAAAAGA...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTCATGCCATCCAATCTTaGTTCCTCTTTCAATGCAGC +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAHAIQS*FLFQCS
Trigger: GCTGCATTGAAAGAGGAACAAAGATTGGATGGCATG...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCTTCCAAATGGAGAGATaGTGTCATCCAATAGCATGC +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSFQMER*CHPIAC
Trigger: GCATGCTATTGGATGACACAATCTCTCCATTTGGAA...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ATCATCCTGTGCCAAGTCCTTATCTCAGCCAAGATTGTGAAGGATAGATTTCAAATAGTCCCATTACAGTaGATGCTTTTTGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: IILCQVLISAKIVKDRFQIVPLQ*MLFVTA
Trigger: TGCTGTCACAAAAAGCATCAACTGTAATGGGACTAT...TTGAAATCTATCCTTCACAATCTTGGCTGAGATAAGGACTTGGCACAGGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCCAGTCGTTTAACACTTaGCAGTCATTAGTTCCAGTA +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSQSFNT*QSLVPV
Trigger: TACTGGAACTAATGACTGCAAAGTGTTAAACGACTG...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp ACACCTAAGAGACCTGATTCAGGAATTTTTCACTTGGGATCCAAGAAAACATTCTTTAATGTATTTCAGTaGACCGGGACACAGCATAAC +
Preference number: 5 (lower is better)
Translates to: TPKRPDSGIFHLGSKKTFFNVFQ*TGTQHN
Trigger: GTTATGCTGTGTCCCGGTCAACTGAAATACATTAAA...GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGAATCAGGTCTCTTAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCAGAATTGCTTTCCAGTaGATGAATTGGGTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSRIAFQ*MNWVCL
Trigger: TAAACAGACCCAATTCATCAACTGGAAAGCAATTCT...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTTTAATGTATTTCAGTaGACCGGGACACAGCATAAC +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAFNVFQ*TGTQHN
Trigger: GTTATGCTGTGTCCCGGTCAACTGAAATACATTAAA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTATAGTCCCATTACAGTaGATGCTTTTTGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAIVPLQ*MLFVTA
Trigger: TGCTGTCACAAAAAGCATCAACTGTAATGGGACTAT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCTACTTCATCATTAAGTaGGTTGAATCCTGGGAGATA +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSYFIIK*VESWEI
Trigger: TATCTCCCAGGATTCAACCAACTTAATGATGAAGTA...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp CCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTGTTCCAAATGCCATTGTGCATaGTCATCTTCTTTCCCAATA +
Preference number: 5 (lower is better)
Translates to: PHFHSINAFQREVKFCCSKCHCA*SSSFPI
Trigger: TATTGGGAAAGAAGATGACAATGCACAATGGCATTT...GGAACAGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320239.11
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTGGATTTTATCAGTGTaGTCATCTCTACAAACAGCA +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAWILSV*SSLQTA
Trigger: TGCTGTTTGTAGAGATGACAACACTGATAAAATCCA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000320239.11
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTATATGCCATTGTGCATaGTCATCTTCTTTCCCAATA +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSAICHCA*SSSFPI
Trigger: TATTGGGAAAGAAGATGACAATGCACAATGGCATAT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265440.12
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTAGAATTGCTTTCCAGTaGATGAATTGGGTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSARIAFQ*MNWVCL
Trigger: TAAACAGACCCAATTCATCAACTGGAAAGCAATTCT...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS-3UTR CAA 90 bp TATGCCCTCACTTTCACTCAATTAATGCCTTTCAAAGAGAAGTCAAATTCTGCTTCAGGAATTTTTCACTaGGGATCCAAGAAAACATTC +
Preference number: 5 (lower is better)
Translates to: YALTFTQLMPFKEKSNSASGIFH*GSKKTF
Trigger: GAATGTTTTCTTGGATCCCAAGTGAAAAATTCCTGA...AGCAGAATTTGACTTCTCTTTGAAAGGCATTAATTGAGTGAAAGTGAGGGCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000457268.5
CDS GCA 72 bp GTGAGGCCAGCATCACTGTCCAGAGTTGTGTGTGCATaGTGCACAAGAGGCCCACCACTTGGCACTGCAGGT +
Preference number: 6 (lower is better)
Translates to: VRPASLSRVVCA*CTRGPPLGTAG
Trigger: ACCTGCAGTGCCAAGTGGTGGGCCTCTTGTGCAGCATGCACACACAACTCTGGACAGTGATGCTGGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000393485.5
ENST00000484212.5
CDS GCA 72 bp AGGCCAGCATCACTGTCCAGAGTTGTGTGTGCATGCTaGACAAGAGGCCCACCACTTGGCACTGCAGGTTGT +
Preference number: 6 (lower is better)
Translates to: RPASLSRVVCAC*TRGPPLGTAGC
Trigger: ACAACCTGCAGTGCCAAGTGGTGGGCCTCTTGTGCAGCATGCACACACAACTCTGGACAGTGATGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000393485.5
ENST00000484212.5
CDS GCA 72 bp TTCTGTGAGGCCAGCATCACTGTCCAGAGTTGTGTGTaGATGCTGCACAAGAGGCCCACCACTTGGCACTGC +
Preference number: 6 (lower is better)
Translates to: FCEASITVQSCV*MLHKRPTTWHC
Trigger: GCAGTGCCAAGTGGTGGGCCTCTTGTGCAGCATGCACACACAACTCTGGACAGTGATGCTGGCCTCACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000393485.5
ENST00000484212.5
CDS CCA 72 bp TGCCCATTCATAGCAGCATGGCATCACCTTTGCTGGTaGCTCAGGCGAAGAATCCGTGAGACTCAATCTCTC +
Preference number: 6 (lower is better)
Translates to: CPFIAAWHHLCW*LRRRIRETQSL
Trigger: GAGAGATTGAGTCTCACGGATTCTTCGCCTGAGCCACCAGCAAAGGTGATGCCATGCTGCTATGAATGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS CCA 72 bp TTCTGCCCATTCATAGCAGCATGGCATCACCTTTGCTaGTGGCTCAGGCGAAGAATCCGTGAGACTCAATCT +
Preference number: 6 (lower is better)
Translates to: FCPFIAAWHHLC*WLRRRIRETQS
Trigger: AGATTGAGTCTCACGGATTCTTCGCCTGAGCCACCAGCAAAGGTGATGCCATGCTGCTATGAATGGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS CCA 72 bp GTTCAGTCAGGCTTTTTCTGCCCATTCATAGCAGCATaGCATCACCTTTGCTGGTGGCTCAGGCGAAGAATC +
Preference number: 6 (lower is better)
Translates to: VQSGFFCPFIAA*HHLCWWLRRRI
Trigger: GATTCTTCGCCTGAGCCACCAGCAAAGGTGATGCCATGCTGCTATGAATGGGCAGAAAAAGCCTGACTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS GCA 72 bp TTTTTCTGCCCATTCATAGCAGCATGGCATCACCTTTaGTGGTGGCTCAGGCGAAGAATCCGTGAGACTCAA +
Preference number: 6 (lower is better)
Translates to: FFCPFIAAWHHL*WWLRRRIRETQ
Trigger: TTGAGTCTCACGGATTCTTCGCCTGAGCCACCAGCAAAGGTGATGCCATGCTGCTATGAATGGGCAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS CCA 72 bp GTTCAGTCAGGCTTTTTCTGCCCATTCATAGCAGCATaGCATCACCTGCTAATGGACACGGAGTTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: VQSGFFCPFIAA*HHLLMDTEFLS
Trigger: AGAGAGAAACTCCGTGTCCATTAGCAGGTGATGCCATGCTGCTATGAATGGGCAGAAAAAGCCTGACTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465322.1
CDS TCA 72 bp CATGGTCCTTTGCTGGTGGCTCAGGCGAAGAATCCGTaGGACTCAATCTCTCCATTTGTTTTGTATGTACCA +
Preference number: 6 (lower is better)
Translates to: HGPLLVAQAKNP*DSISPFVLYVP
Trigger: TGGTACATACAAAACAAATGGAGAGATTGAGTCTCACGGATTCTTCGCCTGAGCCACCAGCAAAGGACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465322.1
CDS TCA 72 bp GCATCACCTTTGCTGGTGGCTCAGGCGAAGAATCCGTaGGACTCAATCTCTCCATTTGTTTTGTATGTACCA +
Preference number: 6 (lower is better)
Translates to: ASPLLVAQAKNP*DSISPFVLYVP
Trigger: TGGTACATACAAAACAAATGGAGAGATTGAGTCTCACGGATTCTTCGCCTGAGCCACCAGCAAAGGTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474337.5
CDS TCA 72 bp TGGCTCTTGATGCACACTCCACATTCACATCTTCACTaGAAAGTCACTAGTTCAGTCAGGCTTTTTCTGCCC +
Preference number: 6 (lower is better)
Translates to: WLLMHTPHSHLH*KVTSSVRLFLP
Trigger: GGGCAGAAAAAGCCTGACTGAACTAGTGACTTTTCAGTGAAGATGTGAATGTGGAGTGTGCATCAAGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465322.1
ENST00000474337.5
CDS GCA 72 bp TTCACTGAAAAGTCACTAGTTCAGTCAGGCTTTTTCTaGCCATTCATAGCAGCATGGCATCACCTGCTAATG +
Preference number: 6 (lower is better)
Translates to: FTEKSLVQSGFF*PFIAAWHHLLM
Trigger: CATTAGCAGGTGATGCCATGCTGCTATGAATGGGCAGAAAAAGCCTGACTGAACTAGTGACTTTTCAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465322.1
CDS CAA 90 bp CTTTCCAGGTGTGCTGGGACCAGCAATGAGTGGATTTTATCAGTGTaGTCATCTCTACAAACAGCACCAAATTATAATCCCTCTTCCCAT +
Preference number: 6 (lower is better)
Translates to: LSRCAGTSNEWILSV*SSLQTAPNYNPSSH
Trigger: ATGGGAAGAGGGATTATAATTTGGTGCTGTTTGTAGAGATGACAACACTGATAAAATCCACTCATTGCTGGTCCCAGCACACCTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000393485.5
CDS CAA 90 bp TGCTGGTGGCTCAGGCGAAGAATCCGTGAGACTCAATCTCTCCATTaGTTTTGTATGTACCATAAGCATTATCTTTCTGTTTACTCCCAC +
Preference number: 6 (lower is better)
Translates to: CWWLRRRIRETQSLH*FCMYHKHYLSVYSH
Trigger: GTGGGAGTAAACAGAAAGATAATGCTTATGGTACATACAAAACAAATGGAGAGATTGAGTCTCACGGATTCTTCGCCTGAGCCACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465322.1
ENST00000474337.5
ENST00000484212.5
CDS CAA 72 bp TCTCGGATAACCAAGACTTCTCCCTCCATGGAACCTTaGCAAAAGCTCCTTTCTCTCCATGGAATTTTCTTT +
Preference number: 6 (lower is better)
Translates to: SRITKTSPSMEP*QKLLSLHGIFF
Trigger: AAAGAAAATTCCATGGAGAGAAAGGAGCTTTTGCAAAGGTTCCATGGAGGGAGAAGTCTTGGTTATCCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465322.1
ENST00000474337.5
CDS CCA 72 bp TCCTTTGTTCCAGCGCATATCAGGATCATTAGACTTTaGAATAAGAGTGCCAAGCTCCTTGATTCGGTAATT +
Preference number: 6 (lower is better)
Translates to: SFVPAHIRIIRL*NKSAKLLDSVI
Trigger: AATTACCGAATCAAGGAGCTTGGCACTCTTATTCCAAAGTCTAATGATCCTGATATGCGCTGGAACAAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000393485.5
ENST00000457268.5
ENST00000484212.5
CDS CAA 72 bp TGTGCTGGGACCAGCAATGAGTGGATTTTATCAGTGTaGTCATCTCTACAAACAGCACCAAATTATAATCCC +
Preference number: 6 (lower is better)
Translates to: CAGTSNEWILSV*SSLQTAPNYNP
Trigger: GGGATTATAATTTGGTGCTGTTTGTAGAGATGACAACACTGATAAAATCCACTCATTGCTGGTCCCAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000393485.5
CDS TCA 72 bp TGGACAAGAAGCACTTGTAAGCCCCATGTTAATTGGTaGAATTCCTTGTTCACCGCTATACACATCCAAAAT +
Preference number: 6 (lower is better)
Translates to: WTRSTCKPHVNW*NSLFTAIHIQN
Trigger: ATTTTGGATGTGTATAGCGGTGAACAAGGAATTTCACCAATTAACATGGGGCTTACAAGTGCTTCTTGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265440.12
ENST00000320239.11
ENST00000393485.5
ENST00000457268.5
ENST00000484212.5
CDS CAA 72 bp ATATCCTCAATAACGTCCTCCATATGCCATTGTGCATaGTCATCTTCTTTCCCAATAGCTAGTAACTTGGTG +
Preference number: 6 (lower is better)
Translates to: ISSITSSICHCA*SSSFPIASNLV
Trigger: CACCAAGTTACTAGCTATTGGGAAAGAAGATGACAATGCACAATGGCATATGGAGGACGTTATTGAGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265440.12
ENST00000484212.5