RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TFDP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000114126

Ensembl transcript IDs: ENST00000464782.5, ENST00000467072.5, ENST00000471095.5, ENST00000475734.5, ENST00000476617.5, ENST00000477292.5, ENST00000486111.5, ENST00000487734.5, ENST00000489671.6, ENST00000491667.1, ENST00000494358.5, ENST00000494656.3, ENST00000495095.6, ENST00000495310.5, ENST00000499676.5

Found 1008 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAGGCAGCCTAGTAGGCACCTGGGGCCCGTAAGCGCTGCTGTGTaGCTAGGCAGCACCGCCCTACCCACTGAGGGCCAGGCACGCAGG +
Preference number: 1 (lower is better)
Translates to: GRQPSRHLGPVSAAV*LGSTALPTEGQARR
Trigger: CCTGCGTGCCTGGCCCTCAGTGGGTAGGGCGGTGCTGCCTAGGCACACAGCAGCGCTTACGGGCCCCAGGTGCCTACTAGGCTGCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp AACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTaGTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTTGCTA +
Preference number: 1 (lower is better)
Translates to: NRGSRLGTRSSERPH*WTGDCLGPGTAQLL
Trigger: TAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR CCA 90 bp TGGCCATTGTCTGTAGTTTCTCGGGCGGTGGGTGTCGCTGAGGGGTaGAGGACCGCCATGTTGGTCGCTCCTTTCCCGCCCTCCTCCAAG +
Preference number: 1 (lower is better)
Translates to: WPLSVVSRAVGVAEG*RTAMLVAPFPPSSK
Trigger: CTTGGAGGAGGGCGGGAAAGGAGCGACCAACATGGCGGTCCTCCACCCCTCAGCGACACCCACCGCCCGAGAAACTACAGACAATGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp TGTGGAAGGACCAGTTGGTCACTGAACTTCTTGGGCCCCTGCCAATaGCCAGCATGGGGAGCCCTTGTCTGTGGAGGTCTCAGCCCGGGG +
Preference number: 1 (lower is better)
Translates to: CGRTSWSLNFLGPCQ*PAWGALVCGGLSPG
Trigger: CCCCGGGCTGAGACCTCCACAGACAAGGGCTCCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp AAACTTGTGGCCATTGTCTGTAGTTTCTCGGGCGGTGGGTGTCGCTaGGGGGTGGAGGACCGCCATGTTGGTCGCTCCTTTCCCGCCCTC +
Preference number: 1 (lower is better)
Translates to: KLVAIVCSFSGGGCR*GVEDRHVGRSFPAL
Trigger: GAGGGCGGGAAAGGAGCGACCAACATGGCGGTCCTCCACCCCTCAGCGACACCCACCGCCCGAGAAACTACAGACAATGGCCACAAGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp CTAAATGAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTaGGGCGAAGGGGCGAGGCCTGACCCTGAGCATCAGCTACGTTGG +
Preference number: 1 (lower is better)
Translates to: LNEQGGSDVIPDPET*GEGARPDPEHQLRW
Trigger: CCAACGTAGCTGATGCTCAGGGTCAGGCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTCATTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp TGTGGTGACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTaGTGCAGGCTCTGCCACAGACAGGCTGAGGGATGGGAGGCAAGT +
Preference number: 1 (lower is better)
Translates to: CGDSVALTEGRSSGF*CRLCHRQAEGWEAS
Trigger: ACTTGCCTCCCATCCCTCAGCCTGTCTGTGGCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTCACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp GTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTaGCACAGACAGGCTGAGGGATGGGAGGCAAGTCAAGCTCTTGCT +
Preference number: 1 (lower is better)
Translates to: VALTEGRSSGFWCRL*HRQAEGWEASQALA
Trigger: AGCAAGAGCTTGACTTGCCTCCCATCCCTCAGCCTGTCTGTGGCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp GTGTGGTGTGGAAGGACCAGTTGGTCACTGAACTTCTTGGGCCCCTaGCAATGGCCAGCATGGGGAGCCCTTGTCTGTGGAGGTCTCAGC +
Preference number: 1 (lower is better)
Translates to: VWCGRTSWSLNFLGP*QWPAWGALVCGGLS
Trigger: GCTGAGACCTCCACAGACAAGGGCTCCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACACCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp GACAGACATGGGCAGCACCAGCTGGTGTGGTGTGGAAGGACCAGTTaGTCACTGAACTTCTTGGGCCCCTGCCAATGGCCAGCATGGGGA +
Preference number: 1 (lower is better)
Translates to: DRHGQHQLVWCGRTS*SLNFLGPCQWPAWG
Trigger: TCCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACACCACACCAGCTGGTGCTGCCCATGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp ACAACTGCTCTCACCACAGGAAATAAGCACGTGGAGGACACAGACTaGCAGCGGGGAAGAGGAAGGCAGCCTAGTAGGCACCTGGGGCCC +
Preference number: 1 (lower is better)
Translates to: TTALTTGNKHVEDTD*QRGRGRQPSRHLGP
Trigger: GGGCCCCAGGTGCCTACTAGGCTGCCTTCCTCTTCCCCGCTGTCAGTCTGTGTCCTCCACGTGCTTATTTCCTGTGGTGAGAGCAGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp GCCACCCCCAGCCAAAGTAGCCTTTCCCAAACGGTCCCGCTACGCTaGTGCTTTCTCCACAGCACTCATCAATCAATCTGCACGTGTTCC +
Preference number: 1 (lower is better)
Translates to: ATPSQSSLSQTVPLR*CFLHSTHQSICTCS
Trigger: GGAACACGTGCAGATTGATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGCTACTTTGGCTGGGGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp CTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGTaGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCT +
Preference number: 1 (lower is better)
Translates to: LMLIQNPSGRTVVTA*PSRREEALGFGAGS
Trigger: AGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp TCCGTTATGATTCGACAGACATGGGCAGCACCAGCTGGTGTGGTGTaGAAGGACCAGTTGGTCACTGAACTTCTTGGGCCCCTGCCAATG +
Preference number: 1 (lower is better)
Translates to: SVMIRQTWAAPAGVV*KDQLVTELLGPLPM
Trigger: CATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACACCACACCAGCTGGTGCTGCCCATGTCTGTCGAATCATAACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp ACCCCCAGCCAAAGTAGCCTTTCCCAAACGGTCCCGCTACGCTGCTaGTTTCTCCACAGCACTCATCAATCAATCTGCACGTGTTCCATC +
Preference number: 1 (lower is better)
Translates to: TPSQSSLSQTVPLRC*FLHSTHQSICTCSI
Trigger: GATGGAACACGTGCAGATTGATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGCTACTTTGGCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp CACAATCAGTGTGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTaGCAAGTAACCCAGCGTGCCACTATAACAAAGAAGCCTGGGCAT +
Preference number: 1 (lower is better)
Translates to: HNQCVPAALGGVICV*QVTQRATITKKPGH
Trigger: ATGCCCAGGCTTCTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACACACTGATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp ATGTCACTCTGTGAGCTGGCCTCACCAGTAACCCAAACACAACGCTaGGGAAGGAGACCATTTCCCACCAACAGCACACACCTATGGCTG +
Preference number: 1 (lower is better)
Translates to: MSLCELASPVTQTQR*GRRPFPTNSTHLWL
Trigger: CAGCCATAGGTGTGTGCTGTTGGTGGGAAATGGTCTCCTTCCTCAGCGTTGTGTTTGGGTTACTGGTGAGGCCAGCTCACAGAGTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp CGGGAAAGGAGTCCCACTTCTACCCCTCAGCTGTTTGGCACTTGGTaGCACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGT +
Preference number: 1 (lower is better)
Translates to: RERSPTSTPQLFGTW*HRTDANPKPIWEDC
Trigger: ACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGGTAGAAGTGGGACTCCTTTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp AGCTCTGGGTTTTGGTGCAGGCTCTGCCACAGACAGGCTGAGGGATaGGAGGCAAGTCAAGCTCTTGCTTGTTTCCCATCTCTAAATGAG +
Preference number: 1 (lower is better)
Translates to: SSGFWCRLCHRQAEG*EASQALACFPSLNE
Trigger: CTCATTTAGAGATGGGAAACAAGCAAGAGCTTGACTTGCCTCCCATCCCTCAGCCTGTCTGTGGCAGAGCCTGCACCAAAACCCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp AAAGCACCTCATCTAGACCTCCAACTAGTTCAGCAGTTCAATCTGTaGCCCTCAGCCACAGGACTGCCCTCAGTATCCCTCACTACACAG +
Preference number: 1 (lower is better)
Translates to: KAPHLDLQLVQQFNL*PSATGLPSVSLTTQ
Trigger: CTGTGTAGTGAGGGATACTGAGGGCAGTCCTGTGGCTGAGGGGCACAGATTGAACTGCTGAACTAGTTGGAGGTCTAGATGAGGTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp GGTATACAAACACCACAACTGCTCTCACCACAGGAAATAAGCACGTaGAGGACACAGACTGACAGCGGGGAAGAGGAAGGCAGCCTAGTA +
Preference number: 1 (lower is better)
Translates to: GIQTPQLLSPQEIST*RTQTDSGEEEGSLV
Trigger: TACTAGGCTGCCTTCCTCTTCCCCGCTGTCAGTCTGTGTCCTCCACGTGCTTATTTCCTGTGGTGAGAGCAGTTGTGGTGTTTGTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp GACCATTTCCCACCAACAGCACACACCTATGGCTGGGGTGGCCAATaGTGGGGCACCAATAAGGATAAGAGTCTTTGGCGGCTTTCTTTT +
Preference number: 1 (lower is better)
Translates to: DHFPPTAHTYGWGGQ*WGTNKDKSLWRLSF
Trigger: AAAAGAAAGCCGCCAAAGACTCTTATCCTTATTGGTGCCCCATCATTGGCCACCCCAGCCATAGGTGTGTGCTGTTGGTGGGAAATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp GATTTTACTCCAGCGACATGTACTGGTGACCATGATGTCACTCTGTaGGCTGGCCTCACCAGTAACCCAAACACAACGCTGAGGAAGGAG +
Preference number: 1 (lower is better)
Translates to: DFTPATCTGDHDVTL*AGLTSNPNTTLRKE
Trigger: CTCCTTCCTCAGCGTTGTGTTTGGGTTACTGGTGAGGCCAGCTCACAGAGTGACATCATGGTCACCAGTACATGTCGCTGGAGTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp ACCCTGAGCATCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTaGAGACCAAAGTCTAACCTGCTGAAACAGCAAGGGGCAAGACAG +
Preference number: 1 (lower is better)
Translates to: TLSISYVGLQCSYKQ*RPKSNLLKQQGARQ
Trigger: CTGTCTTGCCCCTTGCTGTTTCAGCAGGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGATGCTCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp GGAGTTAGTAAAAGAGGAGGCTGCCCCTTAAAGGACAGTTTGGTTTaGAGGGAAATCCCAATCCGTGCAGCTGAAAGATTCCCTGCAGGC +
Preference number: 1 (lower is better)
Translates to: GVSKRGGCPLKDSLV*REIPIRAAERFPAG
Trigger: GCCTGCAGGGAATCTTTCAGCTGCACGGATTGGGATTTCCCTCCAAACCAAACTGTCCTTTAAGGGGCAGCCTCCTCTTTTACTAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp CTTCTTGTATGCACGCTTGTTTTCCTAAGAAGGTTCCCCCACTTGTaGAGGGCTAACCACAACTTCTCTGGATGTGAGTGGGCCATGCTG +
Preference number: 1 (lower is better)
Translates to: LLVCTLVFLRRFPHL*RANHNFSGCEWAML
Trigger: CAGCATGGCCCACTCACATCCAGAGAAGTTGTGGTTAGCCCTCCACAAGTGGGGGAACCTTCTTAGGAAAACAAGCGTGCATACAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494656.3
3UTR TCA 90 bp CTTTCTCCACAGCACTCATCAATCAATCTGCACGTGTTCCATCTGTaGTCAAGTTTCCCCAATAGGAGGAGAACCCAACATCGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: LSPQHSSINLHVFHL*SSFPNRRRTQHRQG
Trigger: GCCCTGCCGATGTTGGGTTCTCCTCCTATTGGGGAAACTTGATCACAGATGGAACACGTGCAGATTGATTGATGAGTGCTGTGGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp TTTCTATCACCAGGGACCCAGCCAGTAGCTTCTGCTATGTGTGTCTaGGTAACCATTGCTGGTGCAGGGGTATATGGACTCCCAATCAGA +
Preference number: 1 (lower is better)
Translates to: FLSPGTQPVASAMCV*VTIAGAGVYGLPIR
Trigger: TCTGATTGGGAGTCCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCAGAAGCTACTGGCTGGGTCCCTGGTGATAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR GCA 90 bp TGGGTCCCAGAGATGAGAAAGGGTGGAGTTAGTAAAAGAGGAGGCTaGCCCTTAAAGGACAGTTTGGTTTGGAGGGAAATCCCAATCCGT +
Preference number: 1 (lower is better)
Translates to: WVPEMRKGGVSKRGG*PLKDSLVWREIPIR
Trigger: ACGGATTGGGATTTCCCTCCAAACCAAACTGTCCTTTAAGGGGCAGCCTCCTCTTTTACTAACTCCACCCTTTCTCATCTCTGGGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp GTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATCAATCTaGACGTGTTCCATCTGTGATCAAGTTTCCCCAATAGGAGGAGAA +
Preference number: 1 (lower is better)
Translates to: VPLRCCFLHSTHQSI*TCSICDQVSPIGGE
Trigger: TTCTCCTCCTATTGGGGAAACTTGATCACAGATGGAACACGTGCAGATTGATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp CACATTATAAATGAGCACTTTCTCCTATCTCAGCACCCTGGTGAATaGGTGTCAGAGAAGTTTCTGGACCTGTCAGGGACTCCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: HIINEHFLLSQHPGE*VSEKFLDLSGTPRA
Trigger: AGCCCTGGGAGTCCCTGACAGGTCCAGAAACTTCTCTGACACCCATTCACCAGGGTGCTGAGATAGGAGAAAGTGCTCATTTATAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp GCCTCCAATGCAGCTATAAGCAGTGAAGACCAAAGTCTAACCTGCTaGAACAGCAAGGGGCAAGACAGCATTGACTTCAACAGGCCTTTT +
Preference number: 1 (lower is better)
Translates to: ASNAAISSEDQSLTC*NSKGQDSIDFNRPF
Trigger: AAAAGGCCTGTTGAAGTCAATGCTGTCTTGCCCCTTGCTGTTTCAGCAGGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp CAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTTTTCAGGACACTaGGAGGTTGAACCTGCCATGGAACTACTGGGAAAACTAGAACTG +
Preference number: 1 (lower is better)
Translates to: QPVHMVSGWFHFSGH*EVEPAMELLGKLEL
Trigger: CAGTTCTAGTTTTCCCAGTAGTTCCATGGCAGGTTCAACCTCTCAGTGTCCTGAAAAATGGAACCACCCACTAACCATATGCACTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp CATTCTCTGCTAATCCACACTCCCTCCAACATACACACTGTGTGCTaGAGGGAGCCTAAGTCACATTTATACTTGGAGCAACTCTGCTGT +
Preference number: 1 (lower is better)
Translates to: HSLLIHTPSNIHTVC*REPKSHLYLEQLCC
Trigger: ACAGCAGAGTTGCTCCAAGTATAAATGTGACTTAGGCTCCCTCCAGCACACAGTGTGTATGTTGGAGGGAGTGTGGATTAGCAGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp AGTGGCTTGTTAAGAAAGTATAGAGACATCTGTCTTTCCACCATCTaGCTCAGTAAAACTGTCTCTTTCCCAGAGGGGCCTTTCCCAGCC +
Preference number: 1 (lower is better)
Translates to: SGLLRKYRDICLSTI*LSKTVSFPEGPFPA
Trigger: GGCTGGGAAAGGCCCCTCTGGGAAAGAGACAGTTTTACTGAGTCAGATGGTGGAAAGACAGATGTCTCTATACTTTCTTAACAAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp TCTATGACTGTTTTTCTGCTTGTATTGATGATTATGAATGGCAGCTaGATGGTAGAGTTCAGAGCCGGCGGGCCCTGGTTTTGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: SMTVFLLVLMIMNGS*MVEFRAGGPWFCCS
Trigger: TGAGCAGCAAAACCAGGGCCCGCCGGCTCTGAACTCTACCATTCAGCTGCCATTCATAATCATCAATACAAGCAGAAAAACAGTCATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR GCA 90 bp GTGTGCTGGAGGGAGCCTAAGTCACATTTATACTTGGAGCAACTCTaGTGTCTCTATGACCCAAGTAGCCAAAAAGAGTTGTGGTTTAGC +
Preference number: 1 (lower is better)
Translates to: VCWREPKSHLYLEQL*CLYDPSSQKELWFS
Trigger: GCTAAACCACAACTCTTTTTGGCTACTTGGGTCATAGAGACAGCAGAGTTGCTCCAAGTATAAATGTGACTTAGGCTCCCTCCAGCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp GCTGCAATCTATGACTGTTTTTCTGCTTGTATTGATGATTATGAATaGCAGCTGAATGGTAGAGTTCAGAGCCGGCGGGCCCTGGTTTTG +
Preference number: 1 (lower is better)
Translates to: AAIYDCFSACIDDYE*QLNGRVQSRRALVL
Trigger: CAAAACCAGGGCCCGCCGGCTCTGAACTCTACCATTCAGCTGCCATTCATAATCATCAATACAAGCAGAAAAACAGTCATAGATTGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR TCA 90 bp GGCTTGAGTGGAAATTTAATCAAACACTGTTATCAACTGGGAATTTaGGGGCAGGGAGGCACATTGCTGAGGGTCATTCAAATGGCATGG +
Preference number: 1 (lower is better)
Translates to: GLSGNLIKHCYQLGI*GQGGTLLRVIQMAW
Trigger: CCATGCCATTTGAATGACCCTCAGCAATGTGCCTCCCTGCCCTCAAATTCCCAGTTGATAACAGTGTTTGATTAAATTTCCACTCAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp ACATACACACTGTGTGCTGGAGGGAGCCTAAGTCACATTTATACTTaGAGCAACTCTGCTGTCTCTATGACCCAAGTAGCCAAAAAGAGT +
Preference number: 1 (lower is better)
Translates to: TYTLCAGGSLSHIYT*SNSAVSMTQVAKKS
Trigger: ACTCTTTTTGGCTACTTGGGTCATAGAGACAGCAGAGTTGCTCCAAGTATAAATGTGACTTAGGCTCCCTCCAGCACACAGTGTGTATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp GTGGCAGGTGTCCCTACACTCTTTCATTCAGAGAAGGAGCAGCTGTaGATACACCACTGCAGTATTTCTAATGACATCTTGAGCCATAAA +
Preference number: 1 (lower is better)
Translates to: VAGVPTLFHSEKEQL*IHHCSISNDILSHK
Trigger: TTTATGGCTCAAGATGTCATTAGAAATACTGCAGTGGTGTATTCACAGCTGCTCCTTCTCTGAATGAAAGAGTGTAGGGACACCTGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp CTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATaGTTTCTTTGTTATATCATCTACTGCTCTGTTGGCCAGACTTTC +
Preference number: 1 (lower is better)
Translates to: LPTLQGLSPLSPQKA*FLCYIIYCSVGQTF
Trigger: GAAAGTCTGGCCAACAGAGCAGTAGATGATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTaGCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAT +
Preference number: 1 (lower is better)
Translates to: HKNPTSQKINELHSH*QLFRDYPHYLLRKH
Trigger: ATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp ATAGTGTGGGTCTTTGGGAAATGCATATTAGTTTTCATCAGTGCTTaGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGG +
Preference number: 1 (lower is better)
Translates to: IVWVFGKCILVFISA*GPLLWVHEYGNPFG
Trigger: CCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGCACTGATGAAAACTAATATGCATTTCCCAAAGACCCACACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp GAGCAACTCTGCTGTCTCTATGACCCAAGTAGCCAAAAAGAGTTGTaGTTTAGCAAACAGTCAAGTTATAGATGTCTTGCAGGGCTAAAC +
Preference number: 1 (lower is better)
Translates to: EQLCCLYDPSSQKEL*FSKQSSYRCLAGLN
Trigger: GTTTAGCCCTGCAAGACATCTATAACTTGACTGTTTGCTAAACCACAACTCTTTTTGGCTACTTGGGTCATAGAGACAGCAGAGTTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp AGGAGCAGCTGTGAATACACCACTGCAGTATTTCTAATGACATCTTaGGCCATAAACAACATAACTGCACTACCATATATCCAGGCAGTA +
Preference number: 1 (lower is better)
Translates to: RSSCEYTTAVFLMTS*AINNITALPYIQAV
Trigger: TACTGCCTGGATATATGGTAGTGCAGTTATGTTGTTTATGGCTCAAGATGTCATTAGAAATACTGCAGTGGTGTATTCACAGCTGCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp CCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCATCTACTaGTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATC +
Preference number: 1 (lower is better)
Translates to: PLSPQKACFLCYIIY*SVGQTFIHTMLTFI
Trigger: GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR GCA 90 bp CACTGCAGTATTTCTAATGACATCTTGAGCCATAAACAACATAACTaGACTACCATATATCCAGGCAGTAGGAGTGTTCAACGTTTTCTA +
Preference number: 1 (lower is better)
Translates to: HCSISNDILSHKQHN*TTIYPGSRSVQRFL
Trigger: TAGAAAACGTTGAACACTCCTACTGCCTGGATATATGGTAGTGCAGTTATGTTGTTTATGGCTCAAGATGTCATTAGAAATACTGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 90 bp CTGCCTCTATCTCTGAGTCTGTACTATGGCTTATTTCTGACAGAATaGAACTTTTGTATCAAAGGAGCTTCAGCTAAAGTTGAATGTTTT +
Preference number: 1 (lower is better)
Translates to: LPLSLSLYYGLFLTE*NFCIKGASAKVECF
Trigger: AAAACATTCAACTTTAGCTGAAGCTCCTTTGATACAAAAGTTTCATTCTGTCAGAAATAAGCCATAGTACAGACTCAGAGATAGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 90 bp TCCTCAGAAAGCATGCTTTCTTTGTTATATCATCTACTGCTCTGTTaGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCAT +
Preference number: 1 (lower is better)
Translates to: SSESMLSLLYHLLLC*PDFHSHYVNFHLNH
Trigger: ATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATAACAAAGAAAGCATGCTTTCTGAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp GTTTCTCGGGCGGTGGGTGTCGCTGAGGGGTGGAGGACCGCCATGTaGGTCGCTCCTTTCCCGCCCTCCTCCAAGGCCCACCTTGATCAT +
Preference number: 2 (lower is better)
Translates to: VSRAVGVAEGWRTAM*VAPFPPSSKAHLDH
Trigger: ATGATCAAGGTGGGCCTTGGAGGAGGGCGGGAAAGGAGCGACCAACATGGCGGTCCTCCACCCCTCAGCGACACCCACCGCCCGAGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCCCCAATCCGTGCAGCTaGAAGATTCCCTGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCPNPCS*KIPCRP
Trigger: GGGCCTGCAGGGAATCTTTCAGCTGCACGGATTGGG...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp GAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGGTCCCGCTACGCTGCTaGTTTCTCCACAGCACTCAT +
Preference number: 2 (lower is better)
Translates to: EQGGSDVIPDPETCGEGAVPLRC*FLHSTH
Trigger: ATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGAC...CGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp GAACGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTCCTCCAGAGAGCATTTaGCTGACTCCAGGCCAAACG +
Preference number: 2 (lower is better)
Translates to: ERTGGLASGLGAVRGRTAPPESI*LTPGQT
Trigger: CGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGG...AGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CCA 90 bp GAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGCCCAGTGTTCCTGACTaGTCTGAGAGGTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: EQGGSDVIPDPETCGEGAPSVPD*SERCAP
Trigger: TGGAGCACACCTCTCAGACCAGTCAGGAACACTGGG...CGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp CGACAGACATGGGCAGCACCAGCTGGTGTGGTGTGGAAGGACCAGTaGGTCACTGAACTTCTTGGGCCCCTGCCAATGGCCAGCATGGGG +
Preference number: 2 (lower is better)
Translates to: RQTWAAPAGVVWKDQ*VTELLGPLPMASMG
Trigger: CCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACACCACACCAGCTGGTGCTGCCCATGTCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp GAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGACTGCACCCAGCCCATaGTTTCCTAACACTGCCTCA +
Preference number: 2 (lower is better)
Translates to: EQGGSDVIPDPETCGEGATAPSP*FPNTAS
Trigger: TGAGGCAGTGTTAGGAAACCATGGGCTGGGTGCAGT...CGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp CACCAGCTGGTGTGGTGTGGAAGGACCAGTTGGTCACTGAACTTCTaGGGCCCCTGCCAATGGCCAGCATGGGGAGCCCTTGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: HQLVWCGRTSWSLNF*GPCQWPAWGALVCG
Trigger: TCCACAGACAAGGGCTCCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACACCACACCAGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTGTGGAGGACACAGACTaGCAGCGGGGAAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: RNSVLKRDPRSAATWAASVEDTD*QRGRGR
Trigger: CCTTCCTCTTCCCCGCTGTCAGTCTGTGTCCTCCAC...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp CGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTGGAGGGCCCTGGTTTTGCTaGTCATTTTGTCGATTTCTC +
Preference number: 2 (lower is better)
Translates to: RTGGLASGLGAVRGRTAGGPWFC*SFCRFL
Trigger: GAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCC...TCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTGTCAGGGTCTGGCCATaGTGGCAGGTGTCCCTACAC +
Preference number: 2 (lower is better)
Translates to: RNSVLKRDPRSAATWAASVRVWP*WQVSLH
Trigger: GTGTAGGGACACCTGCCACCATGGCCAGACCCTGAC...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp CGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTGGAGAACACTTCCTGAACTaGTTAGTCTCTGTGGTGTGC +
Preference number: 2 (lower is better)
Translates to: RTGGLASGLGAVRGRTAGEHFLN*LVSVVC
Trigger: GCACACCACAGAGACTAACCAGTTCAGGAAGTGTTC...TCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR TCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTGGCTGGGGTGGCCAATaGTGGGGCACCAATAAGGAT +
Preference number: 2 (lower is better)
Translates to: RNSVLKRDPRSAATWAASGWGGQ*WGTNKD
Trigger: ATCCTTATTGGTGCCCCATCATTGGCCACCCCAGCC...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCTCGGCCTCCCAAAGTaGTACGATTACAGGCGAGAG +
Preference number: 2 (lower is better)
Translates to: CASSPGRSDLCVASNPACLGLPK*YDYRRE
Trigger: CTCTCGCCTGTAATCGTAGCACTTTGGGAGGCCGAG...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGGGGGCCCGTAAGCGCTaGTGTGTGCCTAGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAGARKR*CVPRQH
Trigger: GTGCTGCCTAGGCACACAGCAGCGCTTACGGGCCCC...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp GAACGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTCGTTCTATCCGCCTCTaGTTCTCTATCTCCAGATTC +
Preference number: 2 (lower is better)
Translates to: ERTGGLASGLGAVRGRTARSIRL*FSISRF
Trigger: GAATCTGGAGATAGAGAAGCAGAGGCGGATAGAACG...AGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR TCA 90 bp GAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGCTCACAGAAGATAAATaGGTTGCACTCACACTGCCA +
Preference number: 2 (lower is better)
Translates to: EQGGSDVIPDPETCGEGALTEDK*VALTLP
Trigger: TGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAG...CGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTGGAGGTTATTTGAATTGGTaGACTCTGACACCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: RTGGLASGLGAVRGRTAGGYLNW*TLTPAH
Trigger: ATGAGCTGGTGTCAGAGTTCACCAATTCAAATAACC...TCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR GCA 90 bp GAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGTACTTGGAGCAACTCTaGTGTCTCTATGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: EQGGSDVIPDPETCGEGAYLEQL*CLYDPS
Trigger: ACTTGGGTCATAGAGACAGCAGAGTTGCTCCAAGTA...CGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCGTGTTAGCATGGTGGTaGGGCTATAAAGAGGCACCA +
Preference number: 2 (lower is better)
Translates to: CASSPGRSDLCVASNPACVLAWW*GYKEAP
Trigger: TGGTGCCTCTTTATAGCCTCACCACCATGCTAACAC...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTTGGAGTGCAGTGGTGTaGTCTTGGCTCTACAACCTC +
Preference number: 2 (lower is better)
Translates to: RNSVLKRDPRSAATWAASWSAVV*SWLYNL
Trigger: GAGGTTGTAGAGCCAAGATCACACCACTGCACTCCA...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATACAACCTCCGCCTCCTaGGCTCAAGCAATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: AFPKRSRYAAAFSTALINTTSAS*AQAILP
Trigger: TGGGAGGATTGCTTGAGCGCAGGAGGCGGAGGTTGT...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGGTCAGGGTCTGGCCATaGTGGCAGGTGTCCCTACAC +
Preference number: 2 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAVRVWP*WQVSLH
Trigger: GTGTAGGGACACCTGCCACCATGGCCAGACCCTGAC...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTACTGCACCCAGCCCATaGTTTCCTAACACTGCCTCA +
Preference number: 2 (lower is better)
Translates to: PECSHLGSQCIWLVGGSITAPSP*FPNTAS
Trigger: TGAGGCAGTGTTAGGAAACCATGGGCTGGGTGCAGT...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp CCGCCATGTTGGTCGCTCCTTTCCCGCCCTCCTCCAAGGCCCACCTaGATCATAAGGCACAAGGTATACAAACACCACAACTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: PPCWSLLSRPPPRPT*IIRHKVYKHHNCSH
Trigger: GTGAGAGCAGTTGTGGTGTTTGTATACCTTGTGCCTTATGATCAAGGTGGGCCTTGGAGGAGGGCGGGAAAGGAGCGACCAACATGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp CCGCACTGCTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTaGCTAAGGCCACTTCTGCATCCAAGCATAACCCTTGGTTTACAC +
Preference number: 2 (lower is better)
Translates to: PHCWTGDCLGPGTAQ*LRPLLHPSITLGLH
Trigger: GTGTAAACCAAGGGTTATGCTTGGATGCAGAAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCAGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR TCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCAGGTGGGCAGATCACCTaGGGTCAGGAGTTCGACACC +
Preference number: 2 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPGGQIT*GQEFDT
Trigger: GGTGTCGAACTCCTGACCTCAGGTGATCTGCCCACC...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCAAGGACAGTTTGGTTTaGAGGGAAATCCCAATCCGT +
Preference number: 2 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCKDSLV*REIPIR
Trigger: ACGGATTGGGATTTCCCTCCAAACCAAACTGTCCTT...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTCAGCACCCTGGTGAATaGGTGTCAGAGAAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: PECSHLGSQCIWLVGGSIQHPGE*VSEKFL
Trigger: CAGAAACTTCTCTGACACCCATTCACCAGGGTGCTG...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp CCGCACTGCTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTTGCTAAGGCTGAGTAACCATTGCTaGTGCAGGGGTATATGGACT +
Preference number: 2 (lower is better)
Translates to: PHCWTGDCLGPGTAQLLRLSNHC*CRGIWT
Trigger: AGTCCATATACCCCTGCACCAGCAATGGTTACTCAG...CCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCAGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR TCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTGTGGAGGACACAGACTaGCAGCGGGGAAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGVEDTD*QRGRGR
Trigger: CCTTCCTCTTCCCCGCTGTCAGTCTGTGTCCTCCAC...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTCTGTTTGGCACTTGGTaGCACAGGACTGATGCTAAT +
Preference number: 2 (lower is better)
Translates to: RNSVLKRDPRSAATWAASLFGTW*HRTDAN
Trigger: ATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAG...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTACAAATGGCATGCATTaGAGCACGACAAGGGATGAG +
Preference number: 2 (lower is better)
Translates to: PECSHLGSQCIWLVGGSITNGMH*STTRDE
Trigger: CTCATCCCTTGTCGTGCTTCAATGCATGCCATTTGT...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTAACATACACACTGTGTaGTGGAGGGAGCCTAAGTCA +
Preference number: 2 (lower is better)
Translates to: RNSVLKRDPRSAATWAASNIHTV*WREPKS
Trigger: TGACTTAGGCTCCCTCCAGCACACAGTGTGTATGTT...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTACAGCTCCCCTCTCCTaGGGACTTTTCATGTTCATT +
Preference number: 2 (lower is better)
Translates to: RNSVLKRDPRSAATWAASTAPLS*GLFMFI
Trigger: AATGAACATGAAAAGTCCCCAGGAGAGGGGAGCTGT...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp TGCTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTTGCTAAGGCCACTTTGGTTTACACTTGACTaGGGTAAGGTGGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: CWTGDCLGPGTAQLLRPLWFTLD*GKVAPV
Trigger: CACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCA...AAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGGCTGGGGTGGCCAATaGTGGGGCACCAATAAGGAT +
Preference number: 2 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTGWGGQ*WGTNKD
Trigger: ATCCTTATTGGTGCCCCATCATTGGCCACCCCAGCC...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp TGCTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTTGCTAAGGCCACTTTCTGCTATGTGTGTCTaGGTAACCATTGCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: CWTGDCLGPGTAQLLRPLSAMCV*VTIAGA
Trigger: TGCACCAGCAATGGTTACTCAGACACACATAGCAGA...AAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR GCA 90 bp TCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTGAAGACCAAAGTCTAACCGTAAGCGCTGCTGTGTaGCTAGGCAGCACCGCCCTA +
Preference number: 2 (lower is better)
Translates to: SATLASNAAISSEDQSLTVSAAV*LGSTAL
Trigger: TAGGGCGGTGCTGCCTAGGCACACAGCAGCGCTTAC...GGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTAGGAGAGATTCCAAGTaGATGTTATGGGACAGAGTG +
Preference number: 2 (lower is better)
Translates to: RNSVLKRDPRSAATWAASRRDSK*MLWDRV
Trigger: CACTCTGTCCCATAACATGCACTTGGAATCTCTCCT...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTCATCTACTGCTCTGTTaGCCAGACTTTCATTCACAC +
Preference number: 2 (lower is better)
Translates to: PECSHLGSQCIWLVGGSIHLLLC*PDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATG...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGAGACAGGCTGAGGGATaGGAGGCAAGTCAAGCTCTT +
Preference number: 2 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTARQAEG*EASQAL
Trigger: AAGAGCTTGACTTGCCTCCCATCCCTCAGCCTGTCT...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCACATGATGTCACTCTGTaGGCTGGCCTCACCAGTAAC +
Preference number: 2 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPHDVTL*AGLTSN
Trigger: GTTACTGGTGAGGCCAGCTCACAGAGTGACATCATG...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATCACGTGTTCCATCTGTaGTCAAGTTTCCCCAATAGG +
Preference number: 2 (lower is better)
Translates to: AFPKRSRYAAAFSTALINHVFHL*SSFPNR
Trigger: CCTATTGGGGAAACTTGATCACAGATGGAACACGTG...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGTCCAAAATGAAGGCTTaGAACTGGAACAGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTASKMKA*NWNSGA
Trigger: GGCCCCACTGTTCCAGTTTCAAGCCTTCATTTTGGA...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCATCCTCCTCCTCACCATaGTCAGTGTTAGCATGGTGG +
Preference number: 2 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPSSSSP*SVLAWW
Trigger: CCACCATGCTAACACTGAGCATGGTGAGGAGGAGGA...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp AGGAGAAGTTCTTGCAGCTGGGCCCGCTTCTGCTTTATCCGTTCTATCCGCCTCCCAGCCAGTAGCTTCTaGTATGTGTGTCTGAGTAAC +
Preference number: 2 (lower is better)
Translates to: RRSSCSWARFCFIRSIRLPASSF*YVCLSN
Trigger: GTTACTCAGACACACATAGCAGAAGCTACTGGCTGG...GAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCTCTGAGTCTGTACTATaGCTTATTTCTGACAGAATG +
Preference number: 2 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCSESVL*LISDRM
Trigger: CATTCTGTCAGAAATAAGCCATAGTACAGACTCAGA...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGCATGATGTCACTCTGTaGGCTGGCCTCACCAGTAAC +
Preference number: 2 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTHDVTL*AGLTSN
Trigger: GTTACTGGTGAGGCCAGCTCACAGAGTGACATCATG...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTGTGAAGTATGGTAAGTaGCAAATGGCATGCATTGAA +
Preference number: 2 (lower is better)
Translates to: RNSVLKRDPRSAATWAASVKYGK*QMACIE
Trigger: TTCAATGCATGCCATTTGTCACTTACCATACTTCAC...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATGAGTTGCACTCACACTaGCAACTCTTCAGGGATTAT +
Preference number: 2 (lower is better)
Translates to: AFPKRSRYAAAFSTALINELHSH*QLFRDY
Trigger: ATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTC...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCATAAACAACATAACTaGACTACCATATATCCAGGC +
Preference number: 2 (lower is better)
Translates to: CASSPGRSDLCVASNPACHKQHN*TTIYPG
Trigger: GCCTGGATATATGGTAGTGCAGTTATGTTGTTTATG...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp TGCTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTTGCTAAGGCCACTTGTAAGGTGGCACCAGTaGTCAGGTCTAAATTTGAAA +
Preference number: 2 (lower is better)
Translates to: CWTGDCLGPGTAQLLRPLVRWHQ*SGLNLK
Trigger: TTTCAAATTTAGACCTGACCACTGGTGCCACCTTAC...AAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR CAA 90 bp TTTGGCACCAGGGATTTCGCAAGTTTCAGATCCTCCAGAGAGCATTaGCCTGACTCCAGGCCAAACGACATTCCCATCCGCTTTAGTACT +
Preference number: 2 (lower is better)
Translates to: FGTRDFASFRSSREH*PDSRPNDIPIRFST
Trigger: AGTACTAAAGCGGATGGGAATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAAACTTGCGAAATCCCTGGTGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR GCA 90 bp TTCAGATCCTCCAGAGAGCATTTGCCTGACTCCAGGCCAAACGACATTCCCATCTGTCTGAGTAACCATTaGTGGTGCAGGGGTATATGG +
Preference number: 2 (lower is better)
Translates to: FRSSREHLPDSRPNDIPICLSNH*WCRGIW
Trigger: CCATATACCCCTGCACCAGCAATGGTTACTCAGACA...GATGGGAATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CCA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGCCAGATTTAGGATGCTaGCAAAGGCAGTGCTGGCAA +
Preference number: 2 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRPDLGC*QRQCWQ
Trigger: TTGCCAGCACTGCCTTTGCCAGCATCCTAAATCTGG...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp AAGGGTGGAGTTAGTAAAAGAGGAGGCTGCCCCTTAAAGGACAGTTaGGTTTGGAGGGAAATCCCAATCCGTGCAGCTGAAAGATTCCCT +
Preference number: 2 (lower is better)
Translates to: KGGVSKRGGCPLKDS*VWREIPIRAAERFP
Trigger: AGGGAATCTTTCAGCTGCACGGATTGGGATTTCCCTCCAAACCAAACTGTCCTTTAAGGGGCAGCCTCCTCTTTTACTAACTCCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGACCTGTCTTAAATCCTaGAATGCATCTTGGGACCTG +
Preference number: 2 (lower is better)
Translates to: LGGVICVWQVTQRATITKTCLKS*NASWDL
Trigger: CAGGTCCCAAGATGCATTTCAGGATTTAAGACAGGT...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp AGGAGAAGTTCTTGCAGCTGGGCCCGCTTCTGCTTTATCCGTTCTATCCGCCTCGTTGTACCTTTTCGTTaGACTTTCTCACACACTTTC +
Preference number: 2 (lower is better)
Translates to: RRSSCSWARFCFIRSIRLVVPFR*TFSHTF
Trigger: GAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAAC...GAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR GCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGAGTAAAAGAGGAGGCTaGCCCTTAAAGGACAGTTTG +
Preference number: 2 (lower is better)
Translates to: LGGVICVWQVTQRATITKSKRGG*PLKDSL
Trigger: CAAACTGTCCTTTAAGGGGCAGCCTCCTCTTTTACT...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTGCAAGTAACCCAGCGTaGCACTATAACAAAGAAGCC +
Preference number: 2 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGASNPA*HYNKEA
Trigger: GGCTTCTTTGTTATAGTGGCACGCTGGGTTACTTGC...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp AACCTTCTAAAGCCTTTGGCACCAGGGATTTCGCAAGTTTCAGATCCTCCAGAGGGCGGGCCCTGGTTTTaGTGCTCATTTTGTCGATTT +
Preference number: 2 (lower is better)
Translates to: NLLKPLAPGISQVSDPPEGGPWF*CSFCRF
Trigger: AAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCC...CTCTGGAGGATCTGAAACTTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAATCTGAGTCTGTACTATaGCTTATTTCTGACAGAATG +
Preference number: 2 (lower is better)
Translates to: TCCHLPSVPDWSERCAPESESVL*LISDRM
Trigger: CATTCTGTCAGAAATAAGCCATAGTACAGACTCAGA...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp GTGCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTaGGGAAAACGGTTCTTAGAAGTCCAGTCATCAGCTTCACCAAAG +
Preference number: 2 (lower is better)
Translates to: VLGDHCFGCMNMGTH*GKRFLEVQSSASPK
Trigger: CTTTGGTGAAGCTGATGACTGGACTTCTAAGAACCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGACCTGTCTTAAATCCTaGAATGCATCTTGGGACCTG +
Preference number: 2 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTTCLKS*NASWDL
Trigger: CAGGTCCCAAGATGCATTTCAGGATTTAAGACAGGT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGTATGGCAGGAATAGCTaGGGTAGTTCTCATTCTCTG +
Preference number: 2 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRYGRNS*GSSHSL
Trigger: CAGAGAATGAGAACTACCTCAGCTATTCCTGCCATA...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGTGTTATATCATCTACTaGTCTGTTGGCCAGACTTTC +
Preference number: 2 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVCYIIY*SVGQTF
Trigger: GAAAGTCTGGCCAACAGAGCAGTAGATGATATAACA...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp GCACCAGTGGTCAGGTCTAAATTTGAAACTGATTGGGTAGAGTTCAGAAGTAGTTGTAGGAGAAGTTCTTaGAGCTGGGCCCGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: APVVRSKFETDWVEFRSSCRRSS*SWARFC
Trigger: GCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCTACA...ACTACTTCTGAACTCTACCCAATCAGTTTCAAATTTAGACCTGACCACTGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CCA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGAGGACGCCAAACTTGTaGCCATTGTCTGTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRRTPNL*PLSVVS
Trigger: AGAAACTACAGACAATGGCCACAAGTTTGGCGTCCT...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp GGGTGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTaGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTC +
Preference number: 2 (lower is better)
Translates to: GCEEHKNPTSQKINE*HSHCQLFRDYPHYL
Trigger: GAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp AAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCATGAGCATCACATATTaGAACGTAGGCTTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: KAVQARKRNVRNTIVKDCMSITY*NVGFLL
Trigger: CAAGAGAAAGCCTACGTTTCAATATGTGATGCTCAT...GCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCTCACAGAAGATAAATaGGTTGCACTCACACTGCCA +
Preference number: 2 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDLTEDK*VALTLP
Trigger: TGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAG...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGTGGGACAAATCCACATaGTTCAGGTCAAAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRWDKST*FRSKFW
Trigger: CCAAAACTTTGACCTGAATCATGTGGATTTGTCCCA...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCTACTTGGAGCAACTCTaGTGTCTCTATGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: QALACFPSLNEQGGSDVIYLEQL*CLYDPS
Trigger: ACTTGGGTCATAGAGACAGCAGAGTTGCTCCAAGTA...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp AACATACACACTGTGTGCTGGAGGGAGCCTAAGTCACATTTATACTaGGAGCAACTCTGCTGTCTCTATGACCCAAGTAGCCAAAAAGAG +
Preference number: 2 (lower is better)
Translates to: NIHTVCWREPKSHLY*EQLCCLYDPSSQKE
Trigger: CTCTTTTTGGCTACTTGGGTCATAGAGACAGCAGAGTTGCTCCAAGTATAAATGTGACTTAGGCTCCCTCCAGCACACAGTGTGTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAATGAGCATCACATATTaGAACGTAGGCTTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKAMSITY*NVGFLL
Trigger: CAAGAGAAAGCCTACGTTTCAATATGTGATGCTCAT...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCCACTTTGATCTTGTGTaGAATTGTGACTCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: QALACFPSLNEQGGSDVIHFDLV*NCDSVL
Trigger: CAGCACTGAGTCACAATTTCACACAAGATCAAAGTG...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGAAACAGACTCCAAAATaGAGGCTTGAAACTGGAACA +
Preference number: 2 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTKQTPK*RLETGT
Trigger: TGTTCCAGTTTCAAGCCTTCATTTTGGAGTCTGTTT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CACTTGACTGGGGTAAGGTGGCACCAGTGGTCAGGTCTAAATTTGAAACTGATTATTATGAATGGCAGCTaGATGGTAGAGTTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: HLTGVRWHQWSGLNLKLIIMNGS*MVEFRA
Trigger: GGCTCTGAACTCTACCATTCAGCTGCCATTCATAAT...AATCAGTTTCAAATTTAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR GCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTACTCATCAATCAATCTaGACGTGTTCCATCTGTGAT +
Preference number: 2 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGTHQSI*TCSICD
Trigger: ATCACAGATGGAACACGTGCAGATTGATTGATGAGT...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp TGGCTTGAGTGGAAATTTAATCAAACACTGTTATCAACTGGGAATTaGAGGGCAGGGAGGCACATTGCTGAGGGTCATTCAAATGGCATG +
Preference number: 2 (lower is better)
Translates to: WLEWKFNQTLLSTGN*RAGRHIAEGHSNGM
Trigger: CATGCCATTTGAATGACCCTCAGCAATGTGCCTCCCTGCCCTCAAATTCCCAGTTGATAACAGTGTTTGATTAAATTTCCACTCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp TCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTGAAGACCAAAGTCTAACCAAATTGCACACTGGGTaGGATCATACAATTACTGCA +
Preference number: 2 (lower is better)
Translates to: SATLASNAAISSEDQSLTKLHTG*DHTITA
Trigger: TGCAGTAATTGTATGATCTCACCCAGTGTGCAATTT...GGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCCATCTACTGCTCTGTTaGCCAGACTTTCATTCACAC +
Preference number: 2 (lower is better)
Translates to: HKNPTSQKINELHSHCQLHLLLC*PDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATG...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp TTGGAGCAACTCTGCTGTCTCTATGACCCAAGTAGCCAAAAAGAGTaGTGGTTTAGCAAACAGTCAAGTTATAGATGTCTTGCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: LEQLCCLYDPSSQKE*WFSKQSSYRCLAGL
Trigger: TAGCCCTGCAAGACATCTATAACTTGACTGTTTGCTAAACCACAACTCTTTTTGGCTACTTGGGTCATAGAGACAGCAGAGTTGCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp GCACCAGTGGTCAGGTCTAAATTTGAAACTGATTGGGTAGAGTTCAGAAGTAGTTGTTCTGGAGGTTGCTaGGAGGTCCAAAATGAAAGT +
Preference number: 2 (lower is better)
Translates to: APVVRSKFETDWVEFRSSCSGGC*EVQNES
Trigger: ACTTTCATTTTGGACCTCTCAGCAACCTCCAGAACA...ACTACTTCTGAACTCTACCCAATCAGTTTCAAATTTAGACCTGACCACTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR TCA 90 bp CACTTGACTGGGGTAAGGTGGCACCAGTGGTCAGGTCTAAATTTGAAACTGATTCTGTGGAGATATCTGTaGTATAACCTTCTAAAGCCT +
Preference number: 2 (lower is better)
Translates to: HLTGVRWHQWSGLNLKLILWRYL*YNLLKP
Trigger: AGGCTTTAGAAGGTTATATCACAGATATCTCCACAG...AATCAGTTTCAAATTTAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR GCA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATAGAGTTGCACTCACACTaGCAACTCTTCAGGGATTAT +
Preference number: 2 (lower is better)
Translates to: QKHDRQGLLRVAISILRIELHSH*QLFRDY
Trigger: ATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTC...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CCA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCCATCTACTGCTCTGTTaGCCAGACTTTCATTCACAC +
Preference number: 2 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGHLLLC*PDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATG...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR CAA 90 bp TCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTaGTTATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACAC +
Preference number: 2 (lower is better)
Translates to: SSGIIPTISSESMLS*LYHLLLCWPDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCATGAGCATCACATATTaGAACGTAGGCTTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: HKNPTSQKINELHSHCQLMSITY*NVGFLL
Trigger: CAAGAGAAAGCCTACGTTTCAATATGTGATGCTCAT...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CACTTGACTGGGGTAAGGTGGCACCAGTGGTCAGGTCTAAATTTGAAACTGATTAGATGCTGCAATCTATaGCTGTTTTTCTGCTTGTAT +
Preference number: 2 (lower is better)
Translates to: HLTGVRWHQWSGLNLKLIRCCNL*LFFCLY
Trigger: ATACAAGCAGAAAAACAGTCATAGATTGCAGCATCT...AATCAGTTTCAAATTTAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGCATCTACTGCTCTGTTaGCCAGACTTTCATTCACAC +
Preference number: 2 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELHLLLC*PDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATG...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCTTCTCTAGTTTTCACTaGACACACAGTGCAAACAAA +
Preference number: 2 (lower is better)
Translates to: EEHKNPTSQKINELHSHCFSSFH*THSANK
Trigger: TTTGTTTGCACTGTGTGTTCAGTGAAAACTAGAGAA...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTTCTCTAGTTTTCACTaGACACACAGTGCAAACAAA +
Preference number: 2 (lower is better)
Translates to: CEEHKNPTSQKINELHSHFSSFH*THSANK
Trigger: TTTGTTTGCACTGTGTGTTCAGTGAAAACTAGAGAA...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATATTCTCTAGTTTTCACTaGACACACAGTGCAAACAAA +
Preference number: 2 (lower is better)
Translates to: QKHDRQGLLRVAISILRIFSSFH*THSANK
Trigger: TTTGTTTGCACTGTGTGTTCAGTGAAAACTAGAGAA...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR GCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCTCTCCTCAGAAAGCATaGTTTCTTTGTTATATCATC +
Preference number: 2 (lower is better)
Translates to: EEHKNPTSQKINELHSHCSPQKA*FLCYII
Trigger: GATGATATAACAAAGAAAGCATGCTTTCTGAGGAGA...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTATGAGCATCACATATTaGAACGTAGGCTTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLMSITY*NVGFLL
Trigger: CAAGAGAAAGCCTACGTTTCAATATGTGATGCTCAT...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
3UTR-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGATGAGCATCACATATTaGAACGTAGGCTTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: QTFIHTMLTFISIISAFMMSITY*NVGFLL
Trigger: CAAGAGAAAGCCTACGTTTCAATATGTGATGCTCAT...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
3UTR-3UTR TCA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTTTCTCTAGTTTTCACTaGACACACAGTGCAAACAAA +
Preference number: 2 (lower is better)
Translates to: AHGNAILFWLPEVALVNSFSSFH*THSANK
Trigger: TTTGTTTGCACTGTGTGTTCAGTGAAAACTAGAGAA...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR TCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTATTCTCTAGTTTTCACTaGACACACAGTGCAAACAAA +
Preference number: 2 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLFSSFH*THSANK
Trigger: TTTGTTTGCACTGTGTGTTCAGTGAAAACTAGAGAA...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
3UTR TCA 72 bp CGCTGCTGTGTGCCTAGGCAGCACCGCCCTACCCACTaGGGGCCAGGCACGCAGGTCCTAGTGCCACTGTGC +
Preference number: 3 (lower is better)
Translates to: RCCVPRQHRPTH*GPGTQVLVPLC
Trigger: GCACAGTGGCACTAGGACCTGCGTGCCTGGCCCTCAGTGGGTAGGGCGGTGCTGCCTAGGCACACAGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp CCTAGTAGGCACCTGGGGCCCGTAAGCGCTGCTGTGTaGCTAGGCAGCACCGCCCTACCCACTGAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: PSRHLGPVSAAV*LGSTALPTEGQ
Trigger: CTGGCCCTCAGTGGGTAGGGCGGTGCTGCCTAGGCACACAGCAGCGCTTACGGGCCCCAGGTGCCTACTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp CAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTaGGGCGAAGGGGCGAGGCCTGACCCTGAGCATCAG +
Preference number: 3 (lower is better)
Translates to: QGGSDVIPDPET*GEGARPDPEHQ
Trigger: CTGATGCTCAGGGTCAGGCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp TCTGTAGTTTCTCGGGCGGTGGGTGTCGCTGAGGGGTaGAGGACCGCCATGTTGGTCGCTCCTTTCCCGCCC +
Preference number: 3 (lower is better)
Translates to: SVVSRAVGVAEG*RTAMLVAPFPP
Trigger: GGGCGGGAAAGGAGCGACCAACATGGCGGTCCTCCACCCCTCAGCGACACCCACCGCCCGAGAAACTACAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp AGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTaGTGCAGGCTCTGCCACAGACAGGCTGAGGGATGG +
Preference number: 3 (lower is better)
Translates to: SVALTEGRSSGF*CRLCHRQAEGW
Trigger: CCATCCCTCAGCCTGTCTGTGGCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp AGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGAGGCCAGGGTTTTGTCATGTaGCCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: RVGAMLSPILRPAAKGRGQGFVM*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAACATGACAAAACCCTG...GCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp GAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGAGGTCTATTTCAGACTaGTTGGGCAGGGACAGCCCA +
Preference number: 3 (lower is better)
Translates to: EQGGSDVIPDPETCGEGARSISD*LGRDSP
Trigger: TGGGCTGTCCCTGCCCAACAAGTCTGAAATAGACCT...CGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTTGCAGTGGCGGGATCTaGGCTCACTGCAACCTCCGC +
Preference number: 3 (lower is better)
Translates to: PECSHLGSQCIWLVGGSICSGGI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGATCCCGCCACTGCA...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTCCCGGGAGGCAGAGGTaGCAGTGGCTGAGATCATGC +
Preference number: 3 (lower is better)
Translates to: RNSVLKRDPRSAATWAASPGRQR*QWLRSC
Trigger: GCATGATCTCAGCCACTGCAACCTCTGCCTCCCGGG...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp GCCATTGTCTGTAGTTTCTCGGGCGGTGGGTGTCGCTaGGGGGTGGAGGACCGCCATGTTGGTCGCTCCTTT +
Preference number: 3 (lower is better)
Translates to: AIVCSFSGGGCR*GVEDRHVGRSF
Trigger: AAAGGAGCGACCAACATGGCGGTCCTCCACCCCTCAGCGACACCCACCGCCCGAGAAACTACAGACAATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp GGAAGGACCAGTTGGTCACTGAACTTCTTGGGCCCCTaGCAATGGCCAGCATGGGGAGCCCTTGTCTGTGGA +
Preference number: 3 (lower is better)
Translates to: GRTSWSLNFLGP*QWPAWGALVCG
Trigger: TCCACAGACAAGGGCTCCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp ACCAGTTGGTCACTGAACTTCTTGGGCCCCTGCCAATaGCCAGCATGGGGAGCCCTTGTCTGTGGAGGTCTC +
Preference number: 3 (lower is better)
Translates to: TSWSLNFLGPCQ*PAWGALVCGGL
Trigger: GAGACCTCCACAGACAAGGGCTCCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp ATTGAACGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTACCCTTGGTTTACACTaGACTGGGGTAAGGTGGCAC +
Preference number: 3 (lower is better)
Translates to: IERTGGLASGLGAVRGRTTLGLH*TGVRWH
Trigger: GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGT...AGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCGTTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CAA 90 bp GAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGCAGAAGATAAATGAGTaGCACTCACACTGCCAACTC +
Preference number: 3 (lower is better)
Translates to: EQGGSDVIPDPETCGEGAQKINE*HSHCQL
Trigger: GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG...CGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp ACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTaGCACAGACAGGCTGAGGGATGGGAGGCAAGTCAA +
Preference number: 3 (lower is better)
Translates to: TEGRSSGFWCRL*HRQAEGWEASQ
Trigger: TTGACTTGCCTCCCATCCCTCAGCCTGTCTGTGGCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp CTGGGGACCTGCTGTCACCTCCCCAGTGTTCCTGACTaGTCTGAGAGGTGTGCTCCAGAACCCACGATAAGA +
Preference number: 3 (lower is better)
Translates to: LGTCCHLPSVPD*SERCAPEPTIR
Trigger: TCTTATCGTGGGTTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp CAGTTTGGTTTGGAGGGAAATCCCAATCCGTGCAGCTaGAAGATTCCCTGCAGGCCCCTGGGGACCTGCTGT +
Preference number: 3 (lower is better)
Translates to: QFGLEGNPNPCS*KIPCRPLGTCC
Trigger: ACAGCAGGTCCCCAGGGGCCTGCAGGGAATCTTTCAGCTGCACGGATTGGGATTTCCCTCCAAACCAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp CTCACCACAGGAAATAAGCACGTGGAGGACACAGACTaGCAGCGGGGAAGAGGAAGGCAGCCTAGTAGGCAC +
Preference number: 3 (lower is better)
Translates to: LTTGNKHVEDTD*QRGRGRQPSRH
Trigger: GTGCCTACTAGGCTGCCTTCCTCTTCCCCGCTGTCAGTCTGTGTCCTCCACGTGCTTATTTCCTGTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp AGCCCTTGTCTGTGGAGGTCTCAGCCCGGGGTTTTCTaGCTTGAGAGAGGCCTAAACCTGACACCACAGCCT +
Preference number: 3 (lower is better)
Translates to: SPCLWRSQPGVF*LERGLNLTPQP
Trigger: AGGCTGTGGTGTCAGGTTTAGGCCTCTCTCAAGTCAGAAAACCCCGGGCTGAGACCTCCACAGACAAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp ATGGTGGTGAACCAAGTGCGTGAAGGAACTCAGTACTaGAACGTGATCCCCGGAGTGCAGCCACCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: MVVNQVREGTQY*NVIPGVQPPGQ
Trigger: CTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCTTCACGCACTTGGTTCACCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp CCCAACATCGGCAGGGCTCTCGCTGCTCCGCCCCAATaGCTGCTCACAGTAGGTACTCAAATGCTTACTGAA +
Preference number: 3 (lower is better)
Translates to: PNIGRALAAPPQ*LLTVGTQMLTE
Trigger: TTCAGTAAGCATTTGAGTACCTACTGTGAGCAGGCATTGGGGCGGAGCAGCGAGAGCCCTGCCGATGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp ATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGTaGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGT +
Preference number: 3 (lower is better)
Translates to: IQNPSGRTVVTA*PSRREEALGFG
Trigger: ACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp TCCCCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATaGTTAGTGGGTGGTTCCATTTTTCAGGACACTGAG +
Preference number: 3 (lower is better)
Translates to: SPECSHLGSQCI*LVGGSIFQDTE
Trigger: CTCAGTGTCCTGAAAAATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp CCACCAACAGCACACACCTATGGCTGGGGTGGCCAATaGTGGGGCACCAATAAGGATAAGAGTCTTTGGCGG +
Preference number: 3 (lower is better)
Translates to: PPTAHTYGWGGQ*WGTNKDKSLWR
Trigger: CCGCCAAAGACTCTTATCCTTATTGGTGCCCCATCATTGGCCACCCCAGCCATAGGTGTGTGCTGTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TTGTCTGTGGAGGTCTCAGCCCGGGGTTTTCTGACTTaGGAGAGGCCTAAACCTGACACCACAGCCTCATGC +
Preference number: 3 (lower is better)
Translates to: LSVEVSARGFLT*ERPKPDTTASC
Trigger: GCATGAGGCTGTGGTGTCAGGTTTAGGCCTCTCTCAAGTCAGAAAACCCCGGGCTGAGACCTCCACAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp ACACCACAACTGCTCTCACCACAGGAAATAAGCACGTaGAGGACACAGACTGACAGCGGGGAAGAGGAAGGC +
Preference number: 3 (lower is better)
Translates to: TPQLLSPQEIST*RTQTDSGEEEG
Trigger: GCCTTCCTCTTCCCCGCTGTCAGTCTGTGTCCTCCACGTGCTTATTTCCTGTGGTGAGAGCAGTTGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp CCAGCGACATGTACTGGTGACCATGATGTCACTCTGTaGGCTGGCCTCACCAGTAACCCAAACACAACGCTG +
Preference number: 3 (lower is better)
Translates to: PATCTGDHDVTL*AGLTSNPNTTL
Trigger: CAGCGTTGTGTTTGGGTTACTGGTGAGGCCAGCTCACAGAGTGACATCATGGTCACCAGTACATGTCGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp CATCTAGACCTCCAACTAGTTCAGCAGTTCAATCTGTaGCCCTCAGCCACAGGACTGCCCTCAGTATCCCTC +
Preference number: 3 (lower is better)
Translates to: HLDLQLVQQFNL*PSATGLPSVSL
Trigger: GAGGGATACTGAGGGCAGTCCTGTGGCTGAGGGGCACAGATTGAACTGCTGAACTAGTTGGAGGTCTAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp TGTGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTaGCAAGTAACCCAGCGTGCCACTATAACAAAGAAG +
Preference number: 3 (lower is better)
Translates to: CVPAALGGVICV*QVTQRATITKK
Trigger: CTTCTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp TTTTGGTGCAGGCTCTGCCACAGACAGGCTGAGGGATaGGAGGCAAGTCAAGCTCTTGCTTGTTTCCCATCT +
Preference number: 3 (lower is better)
Translates to: FWCRLCHRQAEG*EASQALACFPS
Trigger: AGATGGGAAACAAGCAAGAGCTTGACTTGCCTCCCATCCCTCAGCCTGTCTGTGGCAGAGCCTGCACCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCGCATCTAGCATAATCTaGGGACAAATCCACATGATT +
Preference number: 3 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCASSII*GQIHMI
Trigger: AATCATGTGGATTTGTCCCAAGATTATGCTAGATGC...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp TGCTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTTGCTAAGGCCACTTAACCTTCTAAAGCCTTaGGCACCAGGGATTTCGCAA +
Preference number: 3 (lower is better)
Translates to: CWTGDCLGPGTAQLLRPLNLLKP*APGISQ
Trigger: TTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT...AAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR GCA 72 bp TGCTGTAGGAGAAGTTCTTGCAGCTGGGCCCGCTTCTaGTTTATCCGTTCTATCCGCCTCTGCTTCTCTATC +
Preference number: 3 (lower is better)
Translates to: CCRRSSCSWARF*FIRSIRLCFSI
Trigger: GATAGAGAAGCAGAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCTACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CAA 90 bp CTTCTGCATCCAAGCATAACCCTTGGTTTACACTTGACTGGGGTAAGGTGGCACTCCTCCAGAGAGCATTaGCCTGACTCCAGGCCAAAC +
Preference number: 3 (lower is better)
Translates to: LLHPSITLGLHLTGVRWHSSREH*PDSRPN
Trigger: GTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGA...GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGATGCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CAA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTGCATCTAGCATAATCTaGGGACAAATCCACATGATT +
Preference number: 3 (lower is better)
Translates to: RNSVLKRDPRSAATWAASASSII*GQIHMI
Trigger: AATCATGTGGATTTGTCCCAAGATTATGCTAGATGC...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTCTTGGTTTACAGAAATaGCTGGTAGCTAACTTTGCT +
Preference number: 3 (lower is better)
Translates to: RNSVLKRDPRSAATWAASLGLQK*LVANFA
Trigger: AGCAAAGTTAGCTACCAGCAATTTCTGTAAACCAAG...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGAGTTTTCATCAGTGCTaGGGGACCATTGCTTTGGGT +
Preference number: 3 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTASFHQC*GTIALG
Trigger: ACCCAAAGCAATGGTCCCCAAGCACTGATGAAAACT...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp TGCACGCTTGTTTTCCTAAGAAGGTTCCCCCACTTGTaGAGGGCTAACCACAACTTCTCTGGATGTGAGTGG +
Preference number: 3 (lower is better)
Translates to: CTLVFLRRFPHL*RANHNFSGCEW
Trigger: CCACTCACATCCAGAGAAGTTGTGGTTAGCCCTCCACAAGTGGGGGAACCTTCTTAGGAAAACAAGCGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494656.3
3UTR-3UTR CAA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGACTCTGGCAAGAATGTaGCTACTTGGTGAAGGAATG +
Preference number: 3 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTATLARM*LLGEGM
Trigger: CATTCCTTCACCAAGTAGCAACATTCTTGCCAGAGT...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCATCTATTTCAGACTTGTaGGGCAGGGACAGCCCATTT +
Preference number: 3 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPSISDL*GRDSPF
Trigger: AAATGGGCTGTCCCTGCCCAACAAGTCTGAAATAGA...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp GCCAGTAGCTTCTGCTATGTGTGTCTGAGTAACCATTaGTGGTGCAGGGGTATATGGACTCCCAATCAGAAC +
Preference number: 3 (lower is better)
Translates to: ASSFCYVCLSNH*WCRGIWTPNQN
Trigger: GTTCTGATTGGGAGTCCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCAGAAGCTACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR CCA 72 bp AATGAGCACTTTCTCCTATCTCAGCACCCTGGTGAATaGGTGTCAGAGAAGTTTCTGGACCTGTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: NEHFLLSQHPGE*VSEKFLDLSGT
Trigger: AGTCCCTGACAGGTCCAGAAACTTCTCTGACACCCATTCACCAGGGTGCTGAGATAGGAGAAAGTGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp TTGTGGAGGGCTAACCACAACTTCTCTGGATGTGAGTaGGCCATGCTGGCAACAAGCTTAACTTCAGGTTGT +
Preference number: 3 (lower is better)
Translates to: LWRANHNFSGCE*AMLATSLTSGC
Trigger: ACAACCTGAAGTTAAGCTTGTTGCCAGCATGGCCCACTCACATCCAGAGAAGTTGTGGTTAGCCCTCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494656.3
3UTR-3UTR CAA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGAAAGGACAGTTTGGTTaGGAGGGAAATCCCAATCCG +
Preference number: 3 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRKGQFG*EGNPNP
Trigger: CGGATTGGGATTTCCCTCCAAACCAAACTGTCCTTT...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGTCTATTTCAGACTTGTaGGGCAGGGACAGCCCATTT +
Preference number: 3 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRSISDL*GRDSPF
Trigger: AAATGGGCTGTCCCTGCCCAACAAGTCTGAAATAGA...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp ATCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTaGAGACCAAAGTCTAACCTGCTGAAACAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: ISYVGLQCSYKQ*RPKSNLLKQQG
Trigger: CCCTTGCTGTTTCAGCAGGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp CCCACCTCACAGAAGATAAATGAGTTGCACTCACACTaGCAACTCTTCAGGGATTATCCCCACTATCTCCTC +
Preference number: 3 (lower is better)
Translates to: PTSQKINELHSH*QLFRDYPHYLL
Trigger: GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp AGCTTCTGCTATGTGTGTCTGAGTAACCATTGCTGGTaGAGGGGTATATGGACTCCCAATCAGAACACTTCC +
Preference number: 3 (lower is better)
Translates to: SFCYVCLSNHCW*RGIWTPNQNTS
Trigger: GGAAGTGTTCTGATTGGGAGTCCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR CCA 72 bp AAAAGAGGAGGCTGCCCCTTAAAGGACAGTTTGGTTTaGAGGGAAATCCCAATCCGTGCAGCTGAAAGATTC +
Preference number: 3 (lower is better)
Translates to: KRGGCPLKDSLV*REIPIRAAERF
Trigger: GAATCTTTCAGCTGCACGGATTGGGATTTCCCTCCAAACCAAACTGTCCTTTAAGGGGCAGCCTCCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGCATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCTCATCTACTGCTCTGTaGGCCAGACTTTCATTCACA +
Preference number: 3 (lower is better)
Translates to: CTHTANSSGIIPTISSESSSTAL*ARLSFT
Trigger: TGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGA...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCCCCTTAAAGGACAGTTaGGTTTGGAGGGAAATCCCA +
Preference number: 3 (lower is better)
Translates to: QALACFPSLNEQGGSDVIPLKDS*VWREIP
Trigger: TGGGATTTCCCTCCAAACCAAACTGTCCTTTAAGGG...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGCTGATAGGAGCTACCTaGTTTTCAAGGACTGACTCT +
Preference number: 3 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTLIGAT*FSRTDS
Trigger: AGAGTCAGTCCTTGAAAACAAGGTAGCTCCTATCAG...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGCTGATAGGAGCTACCTaGTTTTCAAGGACTGACTCT +
Preference number: 3 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRLIGAT*FSRTDS
Trigger: AGAGTCAGTCCTTGAAAACAAGGTAGCTCCTATCAG...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp AAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCCATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: KAVQARKRNVRNTIVKDCHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...GCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCAGAAGATAAATGAGTaGCACTCACACTGCCAACTC +
Preference number: 3 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDQKINE*HSHCQL
Trigger: GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGAAGTCACATTTATACTaGGAGCAACTCTGCTGTCTC +
Preference number: 3 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTKSHLY*EQLCCL
Trigger: GAGACAGCAGAGTTGCTCCAAGTATAAATGTGACTT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp TTCAGATCCTCCAGAGAGCATTTGCCTGACTCCAGGCCAAACGACATTCCCATCTCTCACACACTTTCATaGAAAAGTGTCTCAAGCCTT +
Preference number: 3 (lower is better)
Translates to: FRSSREHLPDSRPNDIPISHTLS*KSVSSL
Trigger: AAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAGA...GATGGGAATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR TCA 72 bp GCAGCTATAAGCAGTGAAGACCAAAGTCTAACCTGCTaGAACAGCAAGGGGCAAGACAGCATTGACTTCAAC +
Preference number: 3 (lower is better)
Translates to: AAISSEDQSLTC*NSKGQDSIDFN
Trigger: GTTGAAGTCAATGCTGTCTTGCCCCTTGCTGTTTCAGCAGGTTAGACTTTGGTCTTCACTGCTTATAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TTTAAATCCAAACGTGATCTGGGGAATTTTCCGTTATaGTTCGACAGACATGGGCAGCACCAGCTGGTGTGG +
Preference number: 3 (lower is better)
Translates to: FKSKRDLGNFPL*FDRHGQHQLVW
Trigger: CCACACCAGCTGGTGCTGCCCATGTCTGTCGAATCATAACGGAAAATTCCCCAGATCACGTTTGGATTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp GTTTTTCTGCTTGTATTGATGATTATGAATGGCAGCTaGATGGTAGAGTTCAGAGCCGGCGGGCCCTGGTTT +
Preference number: 3 (lower is better)
Translates to: VFLLVLMIMNGS*MVEFRAGGPWF
Trigger: AAACCAGGGCCCGCCGGCTCTGAACTCTACCATTCAGCTGCCATTCATAATCATCAATACAAGCAGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR CCA 72 bp AGTAGCTTCTGCTATGTGTGTCTGAGTAACCATTGCTaGTGCAGGGGTATATGGACTCCCAATCAGAACACT +
Preference number: 3 (lower is better)
Translates to: SSFCYVCLSNHC*CRGIWTPNQNT
Trigger: AGTGTTCTGATTGGGAGTCCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCAGAAGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CAA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGAAATGCTATTCTATTTaGGCTTCCAGAAGTAGCCCT +
Preference number: 3 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTKCYSI*ASRSSP
Trigger: AGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp CTTCTGCATCCAAGCATAACCCTTGGTTTACACTTGACTGGGGTAAGGTGGCACAAATGGTTATTTGAATaGGTGAACTCTGACACCAGC +
Preference number: 3 (lower is better)
Translates to: LLHPSITLGLHLTGVRWHKWLFE*VNSDTS
Trigger: GCTGGTGTCAGAGTTCACCAATTCAAATAACCATTT...GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGATGCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR TCA 72 bp CAGCACTCATCAATCAATCTGCACGTGTTCCATCTGTaGTCAAGTTTCCCCAATAGGAGGAGAACCCAACAT +
Preference number: 3 (lower is better)
Translates to: QHSSINLHVFHL*SSFPNRRRTQH
Trigger: ATGTTGGGTTCTCCTCCTATTGGGGAAACTTGATCACAGATGGAACACGTGCAGATTGATTGATGAGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp CATATGGTTAGTGGGTGGTTCCATTTTTCAGGACACTaGGAGGTTGAACCTGCCATGGAACTACTGGGAAAA +
Preference number: 3 (lower is better)
Translates to: HMVSGWFHFSGH*EVEPAMELLGK
Trigger: TTTTCCCAGTAGTTCCATGGCAGGTTCAACCTCTCAGTGTCCTGAAAAATGGAACCACCCACTAACCATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TCTCTGTGGTGTGCTTATAATTGTTCTGGAGGTTGCTaGGAGGTCCAAAATGAAAGTGCCGGCAGATTCAGT +
Preference number: 3 (lower is better)
Translates to: SLWCAYNCSGGC*EVQNESAGRFS
Trigger: ACTGAATCTGCCGGCACTTTCATTTTGGACCTCTCAGCAACCTCCAGAACAATTATAAGCACACCACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR CCA 72 bp TATGACTGTTTTTCTGCTTGTATTGATGATTATGAATaGCAGCTGAATGGTAGAGTTCAGAGCCGGCGGGCC +
Preference number: 3 (lower is better)
Translates to: YDCFSACIDDYE*QLNGRVQSRRA
Trigger: GGCCCGCCGGCTCTGAACTCTACCATTCAGCTGCCATTCATAATCATCAATACAAGCAGAAAAACAGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CAA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCCATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp CATGGTTTCCTAACACTGCCTCACTTTGATCTTGTGTaGAATTGTGACTCAGTGCTGAGCTTTAGACCCAGA +
Preference number: 3 (lower is better)
Translates to: HGFLTLPHFDLV*NCDSVLSFRPR
Trigger: TCTGGGTCTAAAGCTCAGCACTGAGTCACAATTTCACACAAGATCAAAGTGAGGCAGTGTTAGGAAACCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR GCA 72 bp AGGGAGCCTAAGTCACATTTATACTTGGAGCAACTCTaGTGTCTCTATGACCCAAGTAGCCAAAAAGAGTTG +
Preference number: 3 (lower is better)
Translates to: REPKSHLYLEQL*CLYDPSSQKEL
Trigger: CAACTCTTTTTGGCTACTTGGGTCATAGAGACAGCAGAGTTGCTCCAAGTATAAATGTGACTTAGGCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp AGCATAACCCTTGGTTTACACTTGACTGGGGTAAGGTaGCACCAGTGGTCAGGTCTAAATTTGAAACTGATT +
Preference number: 3 (lower is better)
Translates to: SITLGLHLTGVR*HQWSGLNLKLI
Trigger: AATCAGTTTCAAATTTAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CAA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTCATCTACTGCTCTGTaGGCCAGACTTTCATTCACA +
Preference number: 3 (lower is better)
Translates to: CEEHKNPTSQKINELHSHSSTAL*ARLSFT
Trigger: TGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGA...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAATCATCTACTGCTCTGTaGGCCAGACTTTCATTCACA +
Preference number: 3 (lower is better)
Translates to: EHKNPTSQKINELHSHCQSSTAL*ARLSFT
Trigger: TGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGA...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TTAAGAAAGTATAGAGACATCTGTCTTTCCACCATCTaGCTCAGTAAAACTGTCTCTTTCCCAGAGGGGCCT +
Preference number: 3 (lower is better)
Translates to: LRKYRDICLSTI*LSKTVSFPEGP
Trigger: AGGCCCCTCTGGGAAAGAGACAGTTTTACTGAGTCAGATGGTGGAAAGACAGATGTCTCTATACTTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp GTCTTTGGGAAATGCATATTAGTTTTCATCAGTGCTTaGGGACCATTGCTTTGGGTGCATGAATATGGGAAC +
Preference number: 3 (lower is better)
Translates to: VFGKCILVFISA*GPLLWVHEYGN
Trigger: GTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGCACTGATGAAAACTAATATGCATTTCCCAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TTTGAAACTGATTGGGTAGAGTTCAGAAGTAGTCCCTaGTTTAACCAAGAAGGTCCTGTGGAGATATCTGTG +
Preference number: 3 (lower is better)
Translates to: FETDWVEFRSSP*FNQEGPVEISV
Trigger: CACAGATATCTCCACAGGACCTTCTTGGTTAAATCAGGGACTACTTCTGAACTCTACCCAATCAGTTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR-3UTR CAA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGCATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp GCACCAGTGGTCAGGTCTAAATTTGAAACTGATTGGGTAGAGTTCAGAAGTAGTCTTCATTGTACGATGTaGTACCTTTTCGTTGAACTT +
Preference number: 3 (lower is better)
Translates to: APVVRSKFETDWVEFRSSLHCTM*YLFVEL
Trigger: AAGTTCAACGAAAAGGTACAACATCGTACAATGAAG...ACTACTTCTGAACTCTACCCAATCAGTTTCAAATTTAGACCTGACCACTGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR TCA 72 bp CCAATGCCTGCTCACAGTAGGTACTCAAATGCTTACTaGATGAAGGATGAAATCTTAAGATTCACTGTCCAA +
Preference number: 3 (lower is better)
Translates to: PMPAHSRYSNAY*MKDEILRFTVQ
Trigger: TTGGACAGTGAATCTTAAGATTTCATCCTTCATTCAGTAAGCATTTGAGTACCTACTGTGAGCAGGCATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp AGTGACAAATGGCATGCATTGAAGCACGACAAGGGATaGGTTTTTAAATCCAAACGTGATCTGGGGAATTTT +
Preference number: 3 (lower is better)
Translates to: SDKWHALKHDKG*VFKSKRDLGNF
Trigger: AAAATTCCCCAGATCACGTTTGGATTTAAAAACTCATCCCTTGTCGTGCTTCAATGCATGCCATTTGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CCA 72 bp TGCTGTCTCTATGACCCAAGTAGCCAAAAAGAGTTGTaGTTTAGCAAACAGTCAAGTTATAGATGTCTTGCA +
Preference number: 3 (lower is better)
Translates to: CCLYDPSSQKEL*FSKQSSYRCLA
Trigger: TGCAAGACATCTATAACTTGACTGTTTGCTAAACCACAACTCTTTTTGGCTACTTGGGTCATAGAGACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR-3UTR CAA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCCATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
3UTR-3UTR CAA 90 bp ATAAACTCTTCGCCTAATGTTCTTCTGATCATAAGCCGAATCAGCAGCCAAATGTGTTGTACCTTTTCGTaGAACTTTCTCACACACTTT +
Preference number: 3 (lower is better)
Translates to: INSSPNVLLIISRISSQMCCTFS*NFLTHF
Trigger: AAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACA...CATTTGGCTGCTGATTCGGCTTATGATCAGAAGAACATTAGGCGAAGAGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR TCA 72 bp AAAGCAAAAGGTAAGATGACAAGATCCGGTCTTGTCTaGGAACAGCTGCACAGAATACACATTATAAATGAG +
Preference number: 3 (lower is better)
Translates to: KAKGKMTRSGLV*EQLHRIHIINE
Trigger: CTCATTTATAATGTGTATTCTGTGCAGCTGTTCTCAGACAAGACCGGATCTTGTCATCTTACCTTTTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TCAGCGACTTCATTGTACGATGTTGTACCTTTTCGTTaGACTTTCTCACACACTTTCATTGAAAAGTGTCTC +
Preference number: 3 (lower is better)
Translates to: SATSLYDVVPFR*TFSHTFIEKCL
Trigger: GAGACACTTTTCAATGAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACATCGTACAATGAAGTCGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR CCA 72 bp GTTGTGTACTTCAATCTAATAAAGGAAAGTCTACATTaGGCAAGTCAGATGTGGTGGTTGCATTTTCCTCTT +
Preference number: 3 (lower is better)
Translates to: VVYFNLIKESLH*ASQMWWLHFPL
Trigger: AAGAGGAAAATGCAACCACCACATCTGACTTGCCCAATGTAGACTTTCCTTTATTAGATTGAAGTACACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TTGAATTCTGATAGGAGCTACCTTGTTTTCAAGGACTaGCTCTGGCATTATTTTTCAAATATGGCAGAGTAC +
Preference number: 3 (lower is better)
Translates to: LNSDRSYLVFKD*LWHYFSNMAEY
Trigger: GTACTCTGCCATATTTGAAAAATAATGCCAGAGTCAGTCCTTGAAAACAAGGTAGCTCCTATCAGAATTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TGTACCTTTTCGTTGAACTTTCTCACACACTTTCATTaGAAAGTGTCTCAAGCCTTTCCCATTTTTATCTCC +
Preference number: 3 (lower is better)
Translates to: CTFSLNFLTHFH*KVSQAFPIFIS
Trigger: GGAGATAAAAATGGGAAAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487734.5
3UTR GCA 72 bp ATTTCTAATGACATCTTGAGCCATAAACAACATAACTaGACTACCATATATCCAGGCAGTAGGAGTGTTCAA +
Preference number: 3 (lower is better)
Translates to: ISNDILSHKQHN*TTIYPGSRSVQ
Trigger: TTGAACACTCCTACTGCCTGGATATATGGTAGTGCAGTTATGTTGTTTATGGCTCAAGATGTCATTAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp GTAGCAATCTCAATTCTAAGAATAATTACATGGGTGTaGGGAACACAAAAATCCCACCTCACAGAAGATAAA +
Preference number: 3 (lower is better)
Translates to: VAISILRIITWV*GTQKSHLTEDK
Trigger: TTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATTGCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TGTGAATACACCACTGCAGTATTTCTAATGACATCTTaGGCCATAAACAACATAACTGCACTACCATATATC +
Preference number: 3 (lower is better)
Translates to: CEYTTAVFLMTS*AINNITALPYI
Trigger: GATATATGGTAGTGCAGTTATGTTGTTTATGGCTCAAGATGTCATTAGAAATACTGCAGTGGTGTATTCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR TCA 72 bp TCTCTGAGTCTGTACTATGGCTTATTTCTGACAGAATaGAACTTTTGTATCAAAGGAGCTTCAGCTAAAGTT +
Preference number: 3 (lower is better)
Translates to: SLSLYYGLFLTE*NFCIKGASAKV
Trigger: AACTTTAGCTGAAGCTCCTTTGATACAAAAGTTTCATTCTGTCAGAAATAAGCCATAGTACAGACTCAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGCCCGATCCTGAGACCTaGGGCGAAGGGGCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EQGGSDVIPDPETCGEGAPDPET*GEGARP
Trigger: AGGCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGG...CGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGAGGCTCACCTGGGCTGGAGTaGAGTGGCGGGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RVGAMLSPILRPAAKGRGSPGLE*SGGILA
Trigger: AGCCAAGATCCCGCCACTGCACTCCAGCCCAGGTGA...GCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGAGGCCTCAGTACTGAAACGTaGTCCCCGGAGTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RVGAMLSPILRPAAKGRGLSTET*SPECSH
Trigger: GTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAG...GCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTGGAAGTGAGAGGCCGCACTaGTGGACTGGTGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: RTGGLASGLGAVRGRTAGSERPH*WTGDCL
Trigger: CAAACAGTCACCAGTCCAGCAGTGCGGCCTCTCACT...TCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCCACCTCCAGCACTTCTaGCTGAGCGTCTGGGACGCA +
Preference number: 4 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCHLQHF*LSVWDA
Trigger: TGCGTCCCAGACGCTCAGTCAGAAGTGCTGGAGGTG...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAACCCGATCCTGAGACCTaGGGCGAAGGGGCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPEPDPET*GEGARP
Trigger: AGGCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGG...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAACGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTAGAGCCGGCGGGCCCTaGTTTTGCTGCTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: ERTGGLASGLGAVRGRTARAGGP*FCCSFC
Trigger: ACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCT...AGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTATGACGCCACACGCCTaGAAGGGGGACAGCCACACC +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASMTPHA*KGDSHT
Trigger: GGTGTGGCTGTCCCCCTTTCAGGCGTGTGGCGTCAT...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp TGGGCAGCACCAGCTGGTGTGGTGTGGAAGGACCAGTaGGTCACTGAACTTCTTGGGCCCCTGCCAATGGCC +
Preference number: 4 (lower is better)
Translates to: WAAPAGVVWKDQ*VTELLGPLPMA
Trigger: GGCCATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACACCACACCAGCTGGTGCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGCGGGACTCGGAGCAGTaGGAGGCCGCACTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVRDSEQ*EAALLD
Trigger: GTCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCG...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCTGTAGGAGAAGTTCTTaGAGCTGGGCCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCCRRSS*SWARFC
Trigger: GCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCTACA...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ATTGAACGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTTTTGGGGCCAGGAACTaGCCAGTTGCTAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: IERTGGLASGLGAVRGRTFGARN*PVAKAT
Trigger: AGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAA...AGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCGTTCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCCACCTGGGCAGCCAGTaGATATGGTTAGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCHLGSQ*IWLVGG
Trigger: ACCACCCACTAACCATATGCACTGGCTGCCCAGGTG...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAAGGTGTCGCTGAGGGGTaGAGGACCGCCATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPEGVAEG*RTAMLV
Trigger: GACCAACATGGCGGTCCTCCACCCCTCAGCGACACC...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp GTGTGGTGTGGAAGGACCAGTTGGTCACTGAACTTCTaGGGCCCCTGCCAATGGCCAGCATGGGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: VWCGRTSWSLNF*GPCQWPAWGAL
Trigger: AAGGGCTCCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACACCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp AGCAGTGAGAGGCCGCACTGCTGGACTGGTGACTGTTaGGGGCCAGGAACTGCCCAGTTGCTAAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SSERPHCWTGDC*GPGTAQLLRPL
Trigger: AAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCAGTGCGGCCTCTCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCTGGTCTTGAACTCCTaGGCTCAAGCAATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: CASSPGRSDLCVASNPACLVLNS*AQAMCP
Trigger: CGGGCACATTGCTTGAGCTCAGGAGTTCAAGACCAG...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATTGTTATCCCCGATCCTaGGACCTGCGGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINCYPRS*DLRRRG
Trigger: GCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACA...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTAATCGCCAGGCCATGTaGCATGAAGCTCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASNRQAM*HEARPW
Trigger: CCATGGCCGAGCTTCATGTCACATGGCCTGGCGATT...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATGCGCGCCCTCGAGCCTaGCCAAAGATGAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINARPRA*PKMKGQ
Trigger: CTGACCCTTCATCTTTGGGCAGGCTCGAGGGCGCGC...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR GCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCGTCCCGCTACGCTGCTaGTTTCTCCACAGCACTCAT +
Preference number: 4 (lower is better)
Translates to: CASSPGRSDLCVASNPACVPLRC*FLHSTH
Trigger: ATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGAC...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCAGACAGGCTGAGGGATaGGAGGCAAGTCAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCRQAEG*EASQAL
Trigger: AAGAGCTTGACTTGCCTCCCATCCCTCAGCCTGTCT...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTGAGCCTGCCCAAAGATaGAGGGTCAGGGCGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGEPAQR*RVRARP
Trigger: GGGGCGCGCCCTGACCCTTCATCTTTGGGCAGGCTC...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR TCA 90 bp GAGCAGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGTGTTCTGGAGGTTGCTaGGAGGTCCAAAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: EQGGSDVIPDPETCGEGACSGGC*EVQNES
Trigger: ACTTTCATTTTGGACCTCTCAGCAACCTCCAGAACA...CGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000499676.5
CDS-3UTR TCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCACCCAAACACAACGCTaGGGAAGGAGACCATTTCCC +
Preference number: 4 (lower is better)
Translates to: CASSPGRSDLCVASNPACTQTQR*GRRPFP
Trigger: GGGAAATGGTCTCCTTCCTCAGCGTTGTGTTTGGGT...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCCATGGTGCAGGCTCCTaGTACATAGTGTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCHGAGS*YIVWVF
Trigger: AAAGACCCACACTATGTATCAGGAGCCTGCACCATG...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAACCAGGCCATGTGACATaGAGCTCGGCCATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPEPGHVT*SSAMVK
Trigger: CTTCACCATGGCCGAGCTTCATGTCACATGGCCTGG...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGATAGGCTCCCCACCGTaGCCCCCTCTCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAIGSPP*PPLSVW
Trigger: CCACACTGAGAGAGGGGGGCACGGTGGGGAGCCTAT...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATTCACCTGGGCTGGAGTaGAGTGGCGGGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINSPGLE*SGGILA
Trigger: AGCCAAGATCCCGCCACTGCACTCCAGCCCAGGTGA...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAAAACTTCTTGGGCCCCTaGCAATGGCCAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPENFLGP*QWPAWG
Trigger: TCCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTT...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACGCGGCCGGGTCCCGGTaGACTCACACCCGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHAAGSR*THTRGD
Trigger: GTCTCCCCGGGTGTGAGTCCACCGGGACCCGGCCGC...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR CCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCCAGGAAATAAGCACGTaGAGGACACAGACTGACAGC +
Preference number: 4 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCQEIST*RTQTDS
Trigger: GCTGTCAGTCTGTGTCCTCCACGTGCTTATTTCCTG...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGGGAGGACCGCCATGTTaGTCGCTCCTTTCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAGGPPC*SLLSRP
Trigger: AGGGCGGGAAAGGAGCGACCAACATGGCGGTCCTCC...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTGGACTGTGGAGATATCTGTaGTATAACCTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RTGGLASGLGAVRGRTAGLWRYL*YNLLKP
Trigger: AGGCTTTAGAAGGTTATATCACAGATATCTCCACAG...TCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp AGTAGCTTCTGCTATGTGTGTCTGAGTAACCATTGCTGGTGCAGGGGTATATGGCGGGACTCGGAGCAGTaGGAGGCCGCACTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SSFCYVCLSNHCWCRGIWRDSEQ*EAALLD
Trigger: GTCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCG...CCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCAGAAGCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCTTTCCCATCTCTAAATaGGCAGGGTGGGAGCGATGT +
Preference number: 4 (lower is better)
Translates to: CASSPGRSDLCVASNPACFPISK*AGWERC
Trigger: ACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAA...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTTCCTCCTCCTCACCATaGTCAGTGTTAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASSSSSP*SVLAWW
Trigger: CCACCATGCTAACACTGAGCATGGTGAGGAGGAGGA...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGGCCTCTCCAGGTCCCTaGTGGGTCCCAGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAASPGP*WVPEMR
Trigger: TCTCATCTCTGGGACCCAGCAGGGACCTGGAGAGGC...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGAGGCGTAAGGTGGCACCAGTaGTCAGGTCTAAATTTGAAA +
Preference number: 4 (lower is better)
Translates to: RVGAMLSPILRPAAKGRGVRWHQ*SGLNLK
Trigger: TTTCAAATTTAGACCTGACCACTGGTGCCACCTTAC...GCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAGAAGTTCTTGCAGCTGGGCCCGCTTCTGCTTTATCCGTTCTATCCGCCTCTGGGACTGGTGACTGTTTaGGGCCAGGAACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: EKFLQLGPLLLYPFYPPLGLVTV*GQELPS
Trigger: ACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCC...CAGAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATAGGGTCTGGCCATGGTaGCAGGTGTCCCTACACTCT +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINRVWPW*QVSLHS
Trigger: AGAGTGTAGGGACACCTGCCACCATGGCCAGACCCT...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAATCTCCAGGTCCCTGCTaGGTCCCAGAGATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPESPGPC*VPEMRK
Trigger: CTTTCTCATCTCTGGGACCCAGCAGGGACCTGGAGA...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATCACCTATGGCTGGGGTaGCCAATGATGGGGCACCAA +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINHLWLG*PMMGHQ
Trigger: TTGGTGCCCCATCATTGGCCACCCCAGCCATAGGTG...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATGTAATCCCAGCACTTTaGGAGGCCGAGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINVIPAL*EAERGG
Trigger: TCCACCCCTCTCGGCCTCCCAAAGTGCTGGGATTAC...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCATTGGGCCCCTGCCAATaGCCAGCATGGGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPLGPCQ*PAWGAL
Trigger: AAGGGCTCCCCATGCTGGCCATTGGCAGGGGCCCAA...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGATCCTGGCCCCAGTGTaGACAAGCACAATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVILAPV*TSTIAR
Trigger: CCTGGCGATTGTGCTTGTTCACACTGGGGCCAGGAT...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATCCTCCAGAGAGCATTTaGCTGACTCCAGGCCAAACG +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINPPESI*LTPGQT
Trigger: CGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGG...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATTTTGGGGCCAGGAACTaGCCAGTTGCTAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINFGARN*PVAKAT
Trigger: AGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAA...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCGCAAGTAACCCAGCGTaGCACTATAACAAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: CASSPGRSDLCVASNPACASNPA*HYNKEA
Trigger: GGCTTCTTTGTTATAGTGGCACGCTGGGTTACTTGC...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTGGAGGACCGCCATGTTaGTCGCTCCTTTCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGGGPPC*SLLSRP
Trigger: AGGGCGGGAAAGGAGCGACCAACATGGCGGTCCTCC...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTTGTGGAAGGACCAGTTaGTCACTGAACTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASCGRTS*SLNFLG
Trigger: GCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACA...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATACACCGCCCTACCCACTaGGGGCCAGGCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QKHDRQGLLRVAISILRIHRPTH*GPGTQV
Trigger: GACCTGCGTGCCTGGCCCTCAGTGGGTAGGGCGGTG...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTAGGCAGAGGTTGCAGTaGGCCGGGATTGCGCCACTA +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGRQRLQ*AGIAPL
Trigger: TAGTGGCGCAATCCCGGCTCACTGCAACCTCTGCCT...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAGGTGGGCAGATCACCTaGGGTCAGGAGTTCGACACC +
Preference number: 4 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKAGGQIT*GQEFDT
Trigger: GGTGTCGAACTCCTGACCTCAGGTGATCTGCCCACC...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGCTGGGAGGACTGTGGTaGCAGCGTGGCCCTCACGGA +
Preference number: 4 (lower is better)
Translates to: NPTSQKINELHSHCQLFRLGGLW*QRGPHG
Trigger: TCCGTGAGGGCCACGCTGTCACCACAGTCCTCCCAG...CCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGCAGCCCGGGGTTTTCTaGCTTGAGAGAGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVQPGVF*LERGLN
Trigger: GTTTAGGCCTCTCTCAAGTCAGAAAACCCCGGGCTG...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGCACCTCCAGCACTTCTaGCTGAGCGTCTGGGACGCA +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTHLQHF*LSVWDA
Trigger: TGCGTCCCAGACGCTCAGTCAGAAGTGCTGGAGGTG...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATACCAGAACGCCAACCGTaGGCGCGCCCTCGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QKHDRQGLLRVAISILRIPERQP*ARPRAC
Trigger: GCAGGCTCGAGGGCGCGCGCACGGTTGGCGTTCTGG...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR GCA 90 bp AGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGAGGCAAATCCTCTTACTTCTaGATTTGTGGAAGTCAAACC +
Preference number: 4 (lower is better)
Translates to: RVGAMLSPILRPAAKGRGKSSYF*ICGSQT
Trigger: GGTTTGACTTCCACAAATGCAGAAGTAAGAGGATTT...GCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR GCA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTCCAGCCAGTAGCTTCTaGTATGTGTGTCTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: PECSHLGSQCIWLVGGSIPASSF*YVCLSN
Trigger: GTTACTCAGACACACATAGCAGAAGCTACTGGCTGG...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGTTTGGGGCCAGGAACTaGCCAGTTGCTAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAFGARN*PVAKAT
Trigger: AGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAA...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGAGTGAGAGGCCGCACTaGTGGACTGGTGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTASERPH*WTGDCL
Trigger: CAAACAGTCACCAGTCCAGCAGTGCGGCCTCTCACT...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCAGTAAAAGAGGAGGCTaGCCCTTAAAGGACAGTTTG +
Preference number: 4 (lower is better)
Translates to: CASSPGRSDLCVASNPACSKRGG*PLKDSL
Trigger: CAAACTGTCCTTTAAGGGGCAGCCTCCTCTTTTACT...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCGCCTCTCCAGGTCCCTaGTGGGTCCCAGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESASPGP*WVPEMR
Trigger: TCTCATCTCTGGGACCCAGCAGGGACCTGGAGAGGC...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTGTGCTTGGGGACCATTaGTTTGGGTGCATGAATATG +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASVLGDH*FGCMNM
Trigger: CATATTCATGCACCCAAAGCAATGGTCCCCAAGCAC...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGTTGCCCAGGCTGGAGTaGAAATGGCACGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVLPRLE*KWHDLS
Trigger: GCTGAGATCGTGCCATTTGCACTCCAGCCTGGGCAA...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTTGGTGCAGGGGTATATaGACTCCCAATCAGAACACT +
Preference number: 4 (lower is better)
Translates to: PECSHLGSQCIWLVGGSIWCRGI*TPNQNT
Trigger: AGTGTTCTGATTGGGAGTCCATATACCCCTGCACCA...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTCTCTTGTCTTTATTCTaGGGAGGAGGAATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASLLSLF*GGGILL
Trigger: GAGGAGGATTCCTCCTCCCCAGAATAAAGACAAGAG...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACCCCCGCGCGAGCTTTaGCGGCGGAGCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: EHKNPTSQKINELHSHCQPPREL*RRSSTV
Trigger: CACTGTGCTGCTCCGCCGCCAAAGCTCGCGCGGGGG...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR CCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGAGGGTCTGGCCATGGTaGCAGGTGTCCCTACACTCT +
Preference number: 4 (lower is better)
Translates to: LGGVICVWQVTQRATITKRVWPW*QVSLHS
Trigger: AGAGTGTAGGGACACCTGCCACCATGGCCAGACCCT...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAATGTCAGAGAAGTTTCTaGACCTGTCAGGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPECQRSF*TCQGLP
Trigger: TGGGAGTCCCTGACAGGTCCAGAAACTTCTCTGACA...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGGGGAGCCCTTGTCTGTaGAGGTCTCAGCCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: ISALSKAVQARKRNVRNTGSPCL*RSQPGV
Trigger: AACCCCGGGCTGAGACCTCCACAGACAAGGGCTCCC...CGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCTTGGGCCCCTGCCAATaGCCAGCATGGGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLLGPCQ*PAWGAL
Trigger: AAGGGCTCCCCATGCTGGCCATTGGCAGGGGCCCAA...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp TGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTaGCTAAGGCCACTTCTGCATCCAAGCATAACCCTT +
Preference number: 4 (lower is better)
Translates to: WTGDCLGPGTAQ*LRPLLHPSITL
Trigger: AAGGGTTATGCTTGGATGCAGAAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCCTGTGGAGATATCTGTaGTATAACCTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCLWRYL*YNLLKP
Trigger: AGGCTTTAGAAGGTTATATCACAGATATCTCCACAG...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACGGGACTCGGAGCAGTaGGAGGCCGCACTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: EHKNPTSQKINELHSHCQRDSEQ*EAALLD
Trigger: GTCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCG...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTCTCACAGAAGATAAATaGGTTGCACTCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASLTEDK*VALTLP
Trigger: TGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAG...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCAAATTGCACACTGGGTaGGATCATACAATTACTGCA +
Preference number: 4 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCKLHTG*DHTITA
Trigger: TGCAGTAATTGTATGATCTCACCCAGTGTGCAATTT...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCAACTGCCTCTATCTCTaGGTCTGTACTATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: CASSPGRSDLCVASNPACNCLYL*VCTMAY
Trigger: ATAAGCCATAGTACAGACTCAGAGATAGAGGCAGTT...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAGGCTGGGGTGGCCAATaGTGGGGCACCAATAAGGAT +
Preference number: 4 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKAGWGGQ*WGTNKD
Trigger: ATCCTTATTGGTGCCCCATCATTGGCCACCCCAGCC...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCCACCGCCCTACCCACTaGGGGCCAGGCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAHRPTH*GPGTQV
Trigger: GACCTGCGTGCCTGGCCCTCAGTGGGTAGGGCGGTG...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTATTGCTTTGGGTGCATaGATATGGGAACCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PECSHLGSQCIWLVGGSIIALGA*IWEPIW
Trigger: CCAAATGGGTTCCCATATTCATGCACCCAAAGCAAT...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACATGTTATCCCCGATCCTaGGACCTGCGGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETCYPRS*DLRRRG
Trigger: GCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACA...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTCGGGGAGACGCGGCCTaGCCGGTCAAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AHGNAILFWLPEVALVNSRGDAA*PVKAQE
Trigger: CTCCTGGGCCTTGACCGGGCAGGCCGCGTCTCCCCG...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR GCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTACAACCGCCTTCGGCTaGAGAAGAACTGGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGTTAFG*RRTGGQ
Trigger: TTGGCCGCCAGTTCTTCTGCAGCCGAAGGCGGTTGT...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR GCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGCAGCAGTTCAATCTGTaGCCCTCAGCCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: LGGVICVWQVTQRATITKQQFNL*PSATGL
Trigger: CAGTCCTGTGGCTGAGGGGCACAGATTGAACTGCTG...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCGTAAGCGCTGCTGTGTaGCTAGGCAGCACCGCCCTA +
Preference number: 4 (lower is better)
Translates to: QALACFPSLNEQGGSDVIVSAAV*LGSTAL
Trigger: TAGGGCGGTGCTGCCTAGGCACACAGCAGCGCTTAC...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTTACTTGGAGCAACTCTaGTGTCTCTATGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASYLEQL*CLYDPS
Trigger: ACTTGGGTCATAGAGACAGCAGAGTTGCTCCAAGTA...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACAATAGGCTCCCCACCGTaGCCCCCTCTCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETIGSPP*PPLSVW
Trigger: CCACACTGAGAGAGGGGGGCACGGTGGGGAGCCTAT...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGACGGTCCCGCTACGCTaGTGCTTTCTCCACAGCACT +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTTVPLR*CFLHST
Trigger: AGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAACTGAGTAACCATTGCTaGTGCAGGGGTATATGGACT +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPELSNHC*CRGIWT
Trigger: AGTCCATATACCCCTGCACCAGCAATGGTTACTCAG...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCAGAGCCGGCGGGCCCTaGTTTTGCTGCTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: KAVQARKRNVRNTIVKDCRAGGP*FCCSFC
Trigger: ACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCT...GCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGCTATGTGTGTCTGAGTAACCATTGCTGGTGCAGGGGTATATGGACTCCCAATGAGAGGCCGCACTGCTaGACTGGTGACTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: CYVCLSNHCWCRGIWTPNERPHC*TGDCLG
Trigger: CCCCAAACAGTCACCAGTCCAGCAGTGCGGCCTCTC...ATTGGGAGTCCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp GAACGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTAATGTTGCCTTTTGTTaGACTGAGATTCTGATCTAT +
Preference number: 4 (lower is better)
Translates to: ERTGGLASGLGAVRGRTANVAFC*TEILIY
Trigger: ATAGATCAGAATCTCAGTCCAACAAAAGGCAACATT...AGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCCAATGGCCAGCATaGGGAGCCCTTGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKACQWPA*GALVCG
Trigger: TCCACAGACAAGGGCTCCCCATGCTGGCCATTGGCA...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCACCAGCTGGTGTGGTGTaGAAGGACCAGTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPPAGVV*KDQLVT
Trigger: AGTGACCAACTGGTCCTTCCACACCACACCAGCTGG...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGATGGGCAGCACCAGCTaGTGTGGTGTGGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTMGSTS*CGVEGP
Trigger: TGGTCCTTCCACACCACACCAGCTGGTGCTGCCCAT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGATGATTCGACAGACATaGGCAGCACCAGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAMIRQT*AAPAGV
Trigger: CACACCAGCTGGTGCTGCCCATGTCTGTCGAATCAT...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp CTCGGGAAAGGAGTCCCACTTCTACCCCTCAGCTGTTaGGCACTTGGTGACACAGGACTGATGCTAATCCAA +
Preference number: 4 (lower is better)
Translates to: LGKGVPLLPLSC*ALGDTGLMLIQ
Trigger: TTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGGTAGAAGTGGGACTCCTTTCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCGGGACTCGGAGCAGTaGGAGGCCGCACTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSRDSEQ*EAALLD
Trigger: GTCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCG...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCCGGGACTCGGAGCAGTaGGAGGCCGCACTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIRDSEQ*EAALLD
Trigger: GTCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCG...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTTGTCTTTCCACCATCTaGCTCAGTAAAACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASCLSTI*LSKTVS
Trigger: AGAGACAGTTTTACTGAGTCAGATGGTGGAAAGACA...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGTTTCCCATCTCTAAATaGGCAGGGTGGGAGCGATGT +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAFPISK*AGWERC
Trigger: ACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAA...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACCTGGGAGGACTGTGGTaGCAGCGTGGCCCTCACGGA +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHLGGLW*QRGPHG
Trigger: TCCGTGAGGGCCACGCTGTCACCACAGTCCTCCCAG...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCAATCGCCAGGCCATGTaGCATGAAGCTCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: QALACFPSLNEQGGSDVINRQAM*HEARPW
Trigger: CCATGGCCGAGCTTCATGTCACATGGCCTGGCGATT...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCGTCCGCCCTCTCCCTaGCCAGCTACAGCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSRPPSP*PATAPL
Trigger: AAGCGGGGCTGTAGCTGGGCAGGGAGAGGGCGGACG...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR GCA 90 bp GAGAAGTTCTTGCAGCTGGGCCCGCTTCTGCTTTATCCGTTCTATCCGCCTCTGCGTTCTATCCGCCTCTaGTTCTCTATCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: EKFLQLGPLLLYPFYPPLRSIRL*FSISRF
Trigger: GAATCTGGAGATAGAGAAGCAGAGGCGGATAGAACG...CAGAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCCCTCCAGAGAGCATTTaGCTGACTCCAGGCCAAACG +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESPPESI*LTPGQT
Trigger: CGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGG...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CTTCTGCATCCAAGCATAACCCTTGGTTTACACTTGACTGGGGTAAGGTGGCACCCTCCAGAGAGCATTTaGCTGACTCCAGGCCAAACG +
Preference number: 4 (lower is better)
Translates to: LLHPSITLGLHLTGVRWHPPESI*LTPGQT
Trigger: CGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGG...GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGATGCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAGTGAGAGGCCGCACTaGTGGACTGGTGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESSERPH*WTGDCL
Trigger: CAAACAGTCACCAGTCCAGCAGTGCGGCCTCTCACT...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCGCTGCTCCGCCCCAATaGCTGCTCACAGTAGGTACT +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLAAPPQ*LLTVGT
Trigger: AGTACCTACTGTGAGCAGGCATTGGGGCGGAGCAGC...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTATTCAAATGGCATGGTaGAGGCTCCTGATACATAGT +
Preference number: 4 (lower is better)
Translates to: RNSVLKRDPRSAATWAASIQMAW*RLLIHS
Trigger: ACTATGTATCAGGAGCCTGCACCATGCCATTTGAAT...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAGCTCTGGGTTTTGGTaGAGGCTCTGCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESSSGFW*RLCHRQ
Trigger: CTGTCTGTGGCAGAGCCTGCACCAAAACCCAGAGCT...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTAGCTCTGGGTTTTGGTaGAGGCTCTGCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGSSGFW*RLCHRQ
Trigger: CTGTCTGTGGCAGAGCCTGCACCAAAACCCAGAGCT...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAGAAGTTCTTGCAGCTGGGCCCGCTTCTGCTTTATCCGTTCTATCCGCCTCTGGAACACTTCCTGAACTaGTTAGTCTCTGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: EKFLQLGPLLLYPFYPPLEHFLN*LVSVVC
Trigger: GCACACCACAGAGACTAACCAGTTCAGGAAGTGTTC...CAGAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp TCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTGAAGACCAAAGTCTAACCCACCTATGGCTGGGGTaGCCAATGATGGGGCACCAA +
Preference number: 4 (lower is better)
Translates to: SATLASNAAISSEDQSLTHLWLG*PMMGHQ
Trigger: TTGGTGCCCCATCATTGGCCACCCCAGCCATAGGTG...GGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGAACAGCACACACCTATaGCTGGGGTGGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: LGGVICVWQVTQRATITKNSTHL*LGWPMM
Trigger: CATCATTGGCCACCCCAGCCATAGGTGTGTGCTGTT...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTGGAGTGATCTGTGTGTaGCAAGTAACCCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGGVICV*QVTQRA
Trigger: GGCACGCTGGGTTACTTGCCACACACAGATCACTCC...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATGTAATCCCAGCACTTTaGGAGGCCGAGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDVIPAL*EAERGG
Trigger: TCCACCCCTCTCGGCCTCCCAAAGTGCTGGGATTAC...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATTGGGGACCATTGCTTTaGGTGCATGAATATGGGAAC +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINWGPLL*VHEYGN
Trigger: GTTCCCATATTCATGCACCCAAAGCAATGGTCCCCA...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGAGAAGCTCTGGGTTTTaGTGCAGGCTCTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: LGGVICVWQVTQRATITKRSSGF*CRLCHR
Trigger: TCTGTGGCAGAGCCTGCACCAAAACCCAGAGCTTCT...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGGGCAGCCAGTGCATATaGTTAGTGGGTGGTTCCATT +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVGSQCI*LVGGSI
Trigger: AATGGAACCACCCACTAACCATATGCACTGGCTGCC...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACCGGAGTGCAGCCACCTaGGCAGCCAGTGCATATGGT +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHRSAAT*AASAYG
Trigger: ACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCG...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGAACAACCTAGTGGTTTaGGCTCATGGCCCTTTACCC +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTANNLVV*AHGPLP
Trigger: GGGTAAAGGGCCATGAGCCCAAACCACTAGGTTGTT...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTTGCTAAGGCCACTTGGTTATTTGAATTGGTaGACTCTGACACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CWTGDCLGPGTAQLLRPLGYLNW*TLTPAH
Trigger: ATGAGCTGGTGTCAGAGTTCACCAATTCAAATAACC...AAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCGGGACTCGGAGCAGTaGGAGGCCGCACTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIRDSEQ*EAALLD
Trigger: GTCCAGCAGTGCGGCCTCTCACTGCTCCGAGTCCCG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGGAGTGCAGTGGTGTaGTCTTGGCTCTACAACCTC +
Preference number: 4 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKAWSAVV*SWLYNL
Trigger: GAGGTTGTAGAGCCAAGATCACACCACTGCACTCCA...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCGTGGAGGACACAGACTaGCAGCGGGGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCVEDTD*QRGRGR
Trigger: CCTTCCTCTTCCCCGCTGTCAGTCTGTGTCCTCCAC...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGTCCAAAATGAAGGCTTaGAACTGGAACAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGGVICVWQVTQRATITKSKMKA*NWNSGA
Trigger: GGCCCCACTGTTCCAGTTTCAAGCCTTCATTTTGGA...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCAAGGGAGGCACATTGCTaGGGGTCATTCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPREAHC*GSFKWH
Trigger: ATGCCATTTGAATGACCCTCAGCAATGTGCCTCCCT...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGGAAGCTCGGCCATGGTaGAGTATGGTAAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAEARPW*SMVSDK
Trigger: TTTGTCACTTACCATACTTCACCATGGCCGAGCTTC...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCAAGGACACTGAGAGGTTaGACCTGCCATGGAACTACT +
Preference number: 4 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPRTLRG*TCHGTT
Trigger: AGTAGTTCCATGGCAGGTTCAACCTCTCAGTGTCCT...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATTGTAGGAGAAGTTCTTaGAGCTGGGCCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDCRRSS*SWARFC
Trigger: GCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCTACA...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TTCAGATCCTCCAGAGAGCATTTGCCTGACTCCAGGCCAAACGACATTCCCATCGGCGGGCCCTGGTTTTaGTGCTCATTTTGTCGATTT +
Preference number: 4 (lower is better)
Translates to: FRSSREHLPDSRPNDIPIGGPWF*CSFCRF
Trigger: AAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCC...GATGGGAATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCGTCCCGCTACGCTGCTaGTTTCTCCACAGCACTCAT +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLVPLRC*FLHSTH
Trigger: ATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGAC...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCTGGGTCTTTGGGAAATaGATATTAGTTTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCWVFGK*ILVFIS
Trigger: ACTGATGAAAACTAATATGCATTTCCCAAAGACCCA...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTGAAGACCAAAGTCTAACCCACCTGGGCAGCCAGTaGATATGGTTAGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SATLASNAAISSEDQSLTHLGSQ*IWLVGG
Trigger: ACCACCCACTAACCATATGCACTGGCTGCCCAGGTG...GGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AGAGTTCAGAGCCGGCGGGCCCTGGTTTTGCTGCTCATTTTGTCGATTTCTCTGCTGAGTAACCATTGCTaGTGCAGGGGTATATGGACT +
Preference number: 4 (lower is better)
Translates to: RVQSRRALVLLLILSISLLSNHC*CRGIWT
Trigger: AGTCCATATACCCCTGCACCAGCAATGGTTACTCAG...CAGAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCTGAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp ATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGAGAGCCGGCGGGCCCTaGTTTTGCTGCTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: ISALSKAVQARKRNVRNTRAGGP*FCCSFC
Trigger: ACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCT...CGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TTCAGATCCTCCAGAGAGCATTTGCCTGACTCCAGGCCAAACGACATTCCCATCTGGTTTACACTTGACTaGGGTAAGGTGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: FRSSREHLPDSRPNDIPIWFTLD*GKVAPV
Trigger: CACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCA...GATGGGAATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGCTCTTGTCTTTATTCTaGGGAGGAGGAATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVLLSLF*GGGILL
Trigger: GAGGAGGATTCCTCCTCCCCAGAATAAAGACAAGAG...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AGAGTTCAGAGCCGGCGGGCCCTGGTTTTGCTGCTCATTTTGTCGATTTCTCTGCTCTTGTCTTTATTCTaGGGAGGAGGAATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RVQSRRALVLLLILSISLLLSLF*GGGILL
Trigger: GAGGAGGATTCCTCCTCCCCAGAATAAAGACAAGAG...CAGAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCTGAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGCCAGATTTAGGATGCTaGCAAAGGCAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LGGVICVWQVTQRATITKPDLGC*QRQCWQ
Trigger: TTGCCAGCACTGCCTTTGCCAGCATCCTAAATCTGG...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCGTCAGGGTCTGGCCATaGTGGCAGGTGTCCCTACAC +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCVRVWP*WQVSLH
Trigger: GTGTAGGGACACCTGCCACCATGGCCAGACCCTGAC...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCTCTCCAGGTCCCTGCTaGGTCCCAGAGATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QALACFPSLNEQGGSDVISPGPC*VPEMRK
Trigger: CTTTCTCATCTCTGGGACCCAGCAGGGACCTGGAGA...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAAGTTTCCCAAGAACTCTaGCAAGAATGTTGCTACTTG +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPEVSQEL*QECCYL
Trigger: CAAGTAGCAACATTCTTGCCAGAGTTCTTGGGAAAC...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAACAGCACACACCTATaGCTGGGGTGGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESNSTHL*LGWPMM
Trigger: CATCATTGGCCACCCCAGCCATAGGTGTGTGCTGTT...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGACTGCACCCAGCCCATaGTTTCCTAACACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTTAPSP*FPNTAS
Trigger: TGAGGCAGTGTTAGGAAACCATGGGCTGGGTGCAGT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTTTCTTTAGCATACTGTaGAGTGAGACATGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: PECSHLGSQCIWLVGGSIFFSIL*SETCGK
Trigger: TTTCCCACATGTCTCACTCCACAGTATGCTAAAGAA...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGATGATTCGACAGACATaGGCAGCACCAGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTMIRQT*AAPAGV
Trigger: CACACCAGCTGGTGCTGCCCATGTCTGTCGAATCAT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAAGCAAGTCAGATGTGGTaGTTGCATTTTCCTCTTATC +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPEASQMW*LHFPLI
Trigger: GATAAGAGGAAAATGCAACCACCACATCTGACTTGC...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AACTTCTCTGGATGTGAGTGGGCCATGCTGGCAACAAGCTTAACTTCAGGTTGTAGCAGGCAGCCAGTCTaGTCTCTCTCTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: NFSGCEWAMLATSLTSGCSRQPV*SLSLPT
Trigger: TGTGGGAAGAGAGAGAGACCAGACTGGCTGCCTGCT...ACAACCTGAAGTTAAGCTTGTTGCCAGCATGGCCCACTCACATCCAGAGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494656.3
3UTR CAA 72 bp CTGAATGGTAGAGTTCAGAGCCGGCGGGCCCTGGTTTaGCTGCTCATTTTGTCGATTTCTCTGTACCAGGTT +
Preference number: 4 (lower is better)
Translates to: LNGRVQSRRALV*LLILSISLYQV
Trigger: AACCTGGTACAGAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCTGAACTCTACCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCCAAGGCCCAGGAGTTTaGGGCCCCAGAACGCCAACC +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVQGPGV*GPRTPT
Trigger: GGTTGGCGTTCTGGGGCCTCAAACTCCTGGGCCTTG...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR TCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATTTCAGAAGTAGTCCCTaGTTTAACCAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINFRSSP*FNQEGP
Trigger: AGGACCTTCTTGGTTAAATCAGGGACTACTTCTGAA...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGCTCACAGAAGATAAATaGGTTGCACTCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTALTEDK*VALTLP
Trigger: TGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAG...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCCCCAATCCGTGCAGCTaGAAGATTCCCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGPNPCS*KIPCRP
Trigger: GGGCCTGCAGGGAATCTTTCAGCTGCACGGATTGGG...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCCATGATGTCACTCTGTaGGCTGGCCTCACCAGTAAC +
Preference number: 4 (lower is better)
Translates to: QALACFPSLNEQGGSDVIHDVTL*AGLTSN
Trigger: GTTACTGGTGAGGCCAGCTCACAGAGTGACATCATG...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGATGACGCCACACGCCTaGAAGGGGGACAGCCACACC +
Preference number: 4 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELMTPHA*KGDSHT
Trigger: GGTGTGGCTGTCCCCCTTTCAGGCGTGTGGCGTCAT...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGCATGGTGCAGGCTCCTaGTACATAGTGTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTHGAGS*YIVWVF
Trigger: AAAGACCCACACTATGTATCAGGAGCCTGCACCATG...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCAAGATCCGGTCTTGTCTaGGAACAGCTGCACAGAATA +
Preference number: 4 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPRSGLV*EQLHRI
Trigger: TATTCTGTGCAGCTGTTCTCAGACAAGACCGGATCT...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTAGGACACTGAGAGGTTaGACCTGCCATGGAACTACT +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGRTLRG*TCHGTT
Trigger: AGTAGTTCCATGGCAGGTTCAACCTCTCAGTGTCCT...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCGAAGGAACTCAGTACTaGAACGTGATCCCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLEGTQY*NVIPGV
Trigger: CACTCCGGGGATCACGTTTCAGTACTGAGTTCCTTC...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGGGTGAACCAAGTGCGTaGAGGAACTCAGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: LGGVICVWQVTQRATITKGEPSA*RNSVLK
Trigger: TTTCAGTACTGAGTTCCTTCACGCACTTGGTTCACC...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GTTCTGGAGGTTGCTGAGAGGTCCAAAATGAAAGTGCCGGCAGATTCAGTGCCTCCAGCCAGTAGCTTCTaGTATGTGTGTCTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: VLEVAERSKMKVPADSVPPASSF*YVCLSN
Trigger: GTTACTCAGACACACATAGCAGAAGCTACTGGCTGG...AGGCACTGAATCTGCCGGCACTTTCATTTTGGACCTCTCAGCAACCTCCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAGGCGGGCCCTGGTTTTaGTGCTCATTTTGTCGATTT +
Preference number: 4 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKAGGPWF*CSFCRF
Trigger: AAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCC...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCGGGGCCCGTAAGCGCTaGTGTGTGCCTAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YCSVGQTFIHTMLTFISIGARKR*CVPRQH
Trigger: GTGCTGCCTAGGCACACAGCAGCGCTTACGGGCCCC...GATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAAACTCATCAATCAATCTaGACGTGTTCCATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPETHQSI*TCSICD
Trigger: ATCACAGATGGAACACGTGCAGATTGATTGATGAGT...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GGGGTATATGGACTCCCAATCAGAACACTTCCTGAACTGGTTAGTCTCTGTGGTTTGACTGGGGTAAGGTaGCACCAGTGGTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GVYGLPIRTLPELVSLCGLTGVR*HQWSGL
Trigger: TAGACCTGACCACTGGTGCCACCTTACCCCAGTCAA...ACCACAGAGACTAACCAGTTCAGGAAGTGTTCTGATTGGGAGTCCATATACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp AATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGGAGTGATCTGTGTGTaGCAAGTAACCCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: NPTSQKINELHSHCQLFRGVICV*QVTQRA
Trigger: GGCACGCTGGGTTACTTGCCACACACAGATCACTCC...CCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTAGGTGTCGCTGAGGGGTaGAGGACCGCCATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLGVAEG*RTAMLV
Trigger: GACCAACATGGCGGTCCTCCACCCCTCAGCGACACC...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCCAGCACCCTGGTGAATaGGTGTCAGAGAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESQHPGE*VSEKFL
Trigger: CAGAAACTTCTCTGACACCCATTCACCAGGGTGCTG...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp CAGGGACTCCCAGGGCTTAGCCAGAGGGTCAAAGTGTaGTGCCCACTCACTTTTTCTTCTTTAGCATACTGT +
Preference number: 4 (lower is better)
Translates to: QGLPGLSQRVKV*CPLTFSSLAYC
Trigger: ACAGTATGCTAAAGAAGAAAAAGTGAGTGGGCACAACACTTTGACCCTCTGGCTAAGCCCTGGGAGTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp GTTCAGAGCCGGCGGGCCCTGGTTTTGCTGCTCATTTaGTCGATTTCTCTGTACCAGGTTTTTGAAAGCGAT +
Preference number: 4 (lower is better)
Translates to: VQSRRALVLLLI*SISLYQVFESD
Trigger: ATCGCTTTCAAAAACCTGGTACAGAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGAGAAGGAGCAGCTGTaGATACACCACTGCAGTATT +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTEKEQL*IHHCSI
Trigger: AATACTGCAGTGGTGTATTCACAGCTGCTCCTTCTC...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCGTGTTAGCATGGTGGTaGGGCTATAAAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: QALACFPSLNEQGGSDVIVLAWW*GYKEAP
Trigger: TGGTGCCTCTTTATAGCCTCACCACCATGCTAACAC...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCCACGTGTTCCATCTGTaGTCAAGTTTCCCCAATAGG +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESHVFHL*SSFPNR
Trigger: CCTATTGGGGAAACTTGATCACAGATGGAACACGTG...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTGAAGACCAAAGTCTAACCATCTCAGCACCCTGGTaGATGGGTGTCAGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SATLASNAAISSEDQSLTISAPW*MGVREV
Trigger: AACTTCTCTGACACCCATTCACCAGGGTGCTGAGAT...GGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAGGGAATTTTCCGTTATaGTTCGACAGACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKAGNFPL*FDRHGQ
Trigger: CTGCCCATGTCTGTCGAATCATAACGGAAAATTCCC...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAACAAATGGCATGCATTaGAGCACGACAAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKATNGMH*STTRDE
Trigger: CTCATCCCTTGTCGTGCTTCAATGCATGCCATTTGT...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTATGCACGCTTGTTTTCCTAAGAAGGTTCCCCCACTTGTGGAGGGCTAACCACATACAAATGCCAGTATaGGGAAAACCTGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VCTLVFLRRFPHLWRANHIQMPV*GKPVLG
Trigger: CCCCAGAACAGGTTTTCCTCATACTGGCATTTGTAT...GTGGTTAGCCCTCCACAAGTGGGGGAACCTTCTTAGGAAAACAAGCGTGCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494656.3
CDS-3UTR GCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCAGTGAGAGGCCGCACTaGTGGACTGGTGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCSERPH*WTGDCL
Trigger: CAAACAGTCACCAGTCCAGCAGTGCGGCCTCTCACT...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGTCCTCCTCCTCACCATaGTCAGTGTTAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: NPTSQKINELHSHCQLFRSSSSP*SVLAWW
Trigger: CCACCATGCTAACACTGAGCATGGTGAGGAGGAGGA...CCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATAACAACCTCCGCCTCCTaGGCTCAAGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QKHDRQGLLRVAISILRITTSAS*AQAILP
Trigger: TGGGAGGATTGCTTGAGCGCAGGAGGCGGAGGTTGT...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGGCAAGTAACCCAGCGTaGCACTATAACAAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRASNPA*HYNKEA
Trigger: GGCTTCTTTGTTATAGTGGCACGCTGGGTTACTTGC...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTGTAAGCGCTGCTGTGTaGCTAGGCAGCACCGCCCTA +
Preference number: 4 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSVSAAV*LGSTAL
Trigger: TAGGGCGGTGCTGCCTAGGCACACAGCAGCGCTTAC...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCACGGTCCCGCTACGCTaGTGCTTTCTCCACAGCACT +
Preference number: 4 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGTVPLR*CFLHST
Trigger: AGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGT...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGCAAAGCCAGCCCATATaGAGAATACAGATGATCTCT +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAQSQPI*RIQMIS
Trigger: AGAGATCATCTGTATTCTGCATATGGGCTGGCTTTG...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACAGGCGTGAGCCACTGTaGCTGGCATACCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHRREPL*LAYPPL
Trigger: AAGAGGTGGGTATGCCAGGCACAGTGGCTCACGCCT...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCAGCTCATTGCAACTTTTaGCTCCTGGGTTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPAHCNF*LLGSRD
Trigger: ATCTCTTGAACCCAGGAGGCAAAAGTTGCAATGAGC...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTTGACTGGGGTAAGGTaGCACCAGTGGTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHLTGVR*HQWSGL
Trigger: TAGACCTGACCACTGGTGCCACCTTACCCCAGTCAA...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACATTGACTGGGGTAAGGTaGCACCAGTGGTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETLTGVR*HQWSGL
Trigger: TAGACCTGACCACTGGTGCCACCTTACCCCAGTCAA...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCTGGTTTACACTTGACTaGGGTAAGGTGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLWFTLD*GKVAPV
Trigger: CACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCA...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTCTGGAGGTTGCTGAGAGGTCCAAAATGAAAGTGCCGGCAGATTCAGTGCCTTCCAAGCATAACCCTTaGTTTACACTTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: VLEVAERSKMKVPADSVPSKHNP*FTLDWG
Trigger: ACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGA...AGGCACTGAATCTGCCGGCACTTTCATTTTGGACCTCTCAGCAACCTCCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCGAGAGGCCGCACTGCTaGACTGGTGACTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIERPHC*TGDCLG
Trigger: CCCCAAACAGTCACCAGTCCAGCAGTGCGGCCTCTC...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCGAGAGGCCGCACTGCTaGACTGGTGACTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVERPHC*TGDCLG
Trigger: CCCCAAACAGTCACCAGTCCAGCAGTGCGGCCTCTC...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCGAGAGGCCGCACTGCTaGACTGGTGACTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAERPHC*TGDCLG
Trigger: CCCCAAACAGTCACCAGTCCAGCAGTGCGGCCTCTC...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAACAGCTCCCCTCTCCTaGGGACTTTTCATGTTCATT +
Preference number: 4 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKATAPLS*GLFMFI
Trigger: AATGAACATGAAAAGTCCCCAGGAGAGGGGAGCTGT...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCCCCAGTGTTCCTGACTaGTCTGAGAGGTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HKNPTSQKINELHSHCQLPSVPD*SERCAP
Trigger: TGGAGCACACCTCTCAGACCAGTCAGGAACACTGGG...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACAACTGCACCCAGCCCATaGTTTCCTAACACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETTAPSP*FPNTAS
Trigger: TGAGGCAGTGTTAGGAAACCATGGGCTGGGTGCAGT...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCAGCACCCTGGTGAATaGGTGTCAGAGAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDQHPGE*VSEKFL
Trigger: CAGAAACTTCTCTGACACCCATTCACCAGGGTGCTG...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTGGGAGCCCTTGTCTGTaGAGGTCTCAGCCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLGSPCL*RSQPGV
Trigger: AACCCCGGGCTGAGACCTCCACAGACAAGGGCTCCC...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAATGGCCAGCATaGGGAGCCCTTGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHCQWPA*GALVCG
Trigger: TCCACAGACAAGGGCTCCCCATGCTGGCCATTGGCA...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTGAAGACCAAAGTCTAACCTGTGGAAGGACCAGTTaGTCACTGAACTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SATLASNAAISSEDQSLTCGRTS*SLNFLG
Trigger: GCCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACA...GGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCCGGAGTGCAGCCACCTaGGCAGCCAGTGCATATGGT +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISARSAAT*AASAYG
Trigger: ACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCG...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGGCAACTTTTGCCTCCTaGGTTCAAGAGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRATFAS*VQEILL
Trigger: CAGGAGAATCTCTTGAACCCAGGAGGCAAAAGTTGC...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAACAACCTAGTGGTTTaGGCTCATGGCCCTTTACCC +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLNNLVV*AHGPLP
Trigger: GGGTAAAGGGCCATGAGCCCAAACCACTAGGTTGTT...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGAAGGAAAGTCTACATTaGGCAAGTCAGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LGGVICVWQVTQRATITKKESLH*ASQMWW
Trigger: CCACCACATCTGACTTGCCCAATGTAGACTTTCCTT...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp GTTAGTAAAAGAGGAGGCTGCCCCTTAAAGGACAGTTaGGTTTGGAGGGAAATCCCAATCCGTGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: VSKRGGCPLKDS*VWREIPIRAAE
Trigger: TTCAGCTGCACGGATTGGGATTTCCCTCCAAACCAAACTGTCCTTTAAGGGGCAGCCTCCTCTTTTACTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp ACTGTGTGCTGGAGGGAGCCTAAGTCACATTTATACTaGGAGCAACTCTGCTGTCTCTATGACCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: TVCWREPKSHLY*EQLCCLYDPSS
Trigger: GCTACTTGGGTCATAGAGACAGCAGAGTTGCTCCAAGTATAAATGTGACTTAGGCTCCCTCCAGCACACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGCTCACACACTTTCATTaGAAAGTGTCTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTALTHFH*KVSQAF
Trigger: AAAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAG...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATGTGGAGGACACAGACTaGCAGCGGGGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNVEDTD*QRGRGR
Trigger: CCTTCCTCTTCCCCGCTGTCAGTCTGTGTCCTCCAC...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTTATGGCAGGAATAGCTaGGGTAGTTCTCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGYGRNS*GSSHSL
Trigger: CAGAGAATGAGAACTACCTCAGCTATTCCTGCCATA...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGAGGCAGAGGTTGCAGTaGGCCGGGATTGCGCCACTA +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRRQRLQ*AGIAPL
Trigger: TAGTGGCGCAATCCCGGCTCACTGCAACCTCTGCCT...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACAGAGGTTGCAGTGGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHRGCSG*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCCACTGCAACCTCT...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGTGTGGTCAACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTVWSTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTTGACCACAC...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGTGCAGCTATAAGCAGTaGAGACCAAAGTCTAACCTG +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTCSYKQ*RPKSNL
Trigger: CAGGTTAGACTTTGGTCTTCACTGCTTATAGCTGCA...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCATCCTGGCCCCAGTGTaGACAAGCACAATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIILAPV*TSTIAR
Trigger: CCTGGCGATTGTGCTTGTTCACACTGGGGCCAGGAT...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATAAGCTGGGCCCGCTTCTaGTTTATCCGTTCTATCCGC +
Preference number: 4 (lower is better)
Translates to: QKHDRQGLLRVAISILRISWARF*FIRSIR
Trigger: GCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCT...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GCACCAGTGGTCAGGTCTAAATTTGAAACTGATTGGGTAGAGTTCAGAAGTAGTAGCTGGGCCCGCTTCTaGTTTATCCGTTCTATCCGC +
Preference number: 4 (lower is better)
Translates to: APVVRSKFETDWVEFRSSSWARF*FIRSIR
Trigger: GCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCT...ACTACTTCTGAACTCTACCCAATCAGTTTCAAATTTAGACCTGACCACTGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGTAGGAGAAGTTCTTaGAGCTGGGCCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHCRRSS*SWARFC
Trigger: GCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCTACA...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGGAGAAGTTCTTGCAGCTGGGCCCGCTTCTGCTTTATCCGTTCTATCCGCCTCTTTTTGAAAGCGATTTaGTGTAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RRSSCSWARFCFIRSIRLFLKAI*CRRSSC
Trigger: GCAAGAACTTCTCCTACAGCAAATCGCTTTCAAAAA...GAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp AACCTTCTAAAGCCTTTGGCACCAGGGATTTCGCAAGTTTCAGATCCTCCAGAGGGGCCCTGGTTTTGCTaGTCATTTTGTCGATTTCTC +
Preference number: 4 (lower is better)
Translates to: NLLKPLAPGISQVSDPPEGPWFC*SFCRFL
Trigger: GAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCC...CTCTGGAGGATCTGAAACTTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACAGGCGGGCCCTGGTTTTaGTGCTCATTTTGTCGATTT +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETGGPWF*CSFCRF
Trigger: AAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCC...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAATTTGGGGCCAGGAACTaGCCAGTTGCTAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: EHKNPTSQKINELHSHCQFGARN*PVAKAT
Trigger: AGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAA...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGTTTCATGTTCATTTCTaGCTTGTCAAAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVFHVHF*LVKGSP
Trigger: TGGACTGCCTTTGACAAGGCAGAAATGAACATGAAA...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTGGGGCCCGTAAGCGCTaGTGTGTGCCTAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPGARKR*CVPRQH
Trigger: GTGCTGCCTAGGCACACAGCAGCGCTTACGGGCCCC...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGTACTTGGAGCAACTCTaGTGTCTCTATGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRYLEQL*CLYDPS
Trigger: ACTTGGGTCATAGAGACAGCAGAGTTGCTCCAAGTA...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTGCTGCTCCGCCCCAATaGCTGCTCACAGTAGGTACT +
Preference number: 4 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSAAPPQ*LLTVGT
Trigger: AGTACCTACTGTGAGCAGGCATTGGGGCGGAGCAGC...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGAGGAGAGATTCCAAGTaGATGTTATGGGACAGAGTG +
Preference number: 4 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRRRDSK*MLWDRV
Trigger: CACTCTGTCCCATAACATGCACTTGGAATCTCTCCT...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCAACTTCTTGGGCCCCTaGCAATGGCCAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYINFLGP*QWPAWG
Trigger: TCCCCATGCTGGCCATTGGCAGGGGCCCAAGAAGTT...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGAGGCGTGAGCCACTGTaGCTGGCATACCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELRREPL*LAYPPL
Trigger: AAGAGGTGGGTATGCCAGGCACAGTGGCTCACGCCT...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TTCAGATCCTCCAGAGAGCATTTGCCTGACTCCAGGCCAAACGACATTCCCATCGTAAGGTGGCACCAGTaGTCAGGTCTAAATTTGAAA +
Preference number: 4 (lower is better)
Translates to: FRSSREHLPDSRPNDIPIVRWHQ*SGLNLK
Trigger: TTTCAAATTTAGACCTGACCACTGGTGCCACCTTAC...GATGGGAATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCTTGACTGGGGTAAGGTaGCACCAGTGGTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCLTGVR*HQWSGL
Trigger: TAGACCTGACCACTGGTGCCACCTTACCCCAGTCAA...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAGATCATACAATTACTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATGGACTGGTGACTGTTTaGGGCCAGGAACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: EIIQLLQGTVGKQFGHRNGLVTV*GQELPS
Trigger: ACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCC...ATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAGTAATTGTATGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCGGACTGGTGACTGTTTaGGGCCAGGAACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAGLVTV*GQELPS
Trigger: ACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCC...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATTCTGAGTCTGTACTATaGCTTATTTCTGACAGAATG +
Preference number: 4 (lower is better)
Translates to: AFPKRSRYAAAFSTALINSESVL*LISDRM
Trigger: CATTCTGTCAGAAATAAGCCATAGTACAGACTCAGA...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAGGACGCCAAACTTGTaGCCATTGTCTGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESRTPNL*PLSVVS
Trigger: AGAAACTACAGACAATGGCCACAAGTTTGGCGTCCT...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGTCATTCAAATGGCATaGTGCAGGCTCCTGATACAT +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTVIQMA*CRLLIH
Trigger: ATGTATCAGGAGCCTGCACCATGCCATTTGAATGAC...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAACATGTTTGGCTTGAGTaGAAATTTAATCAAACACTG +
Preference number: 4 (lower is better)
Translates to: TCCHLPSVPDWSERCAPEHVWLE*KFNQTL
Trigger: CAGTGTTTGATTAAATTTCCACTCAAGCCAAACATG...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACAAATCCAAAACCCATCTaGGAGGACTGTGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETNPKPI*EDCGDS
Trigger: GCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATT...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCCAGCACCAGCTGGTGTaGTGTGGAAGGACCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVQHQLV*CGRTSW
Trigger: CCAACTGGTCCTTCCACACCACACCAGCTGGTGCTG...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGATGGGCAGCACCAGCTaGTGTGGTGTGGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELMGSTS*CGVEGP
Trigger: TGGTCCTTCCACACCACACCAGCTGGTGCTGCCCAT...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGAAGGAAAGTCTACATTaGGCAAGTCAGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTKESLH*ASQMWW
Trigger: CCACCACATCTGACTTGCCCAATGTAGACTTTCCTT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTGGAAATGCAACAAATaGAATGTTGCCTGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: KAVQARKRNVRNTIVKDCWKCNK*NVAWSK
Trigger: CTTAGACCAGGCAACATTTCATTTGTTGCATTTCCA...GCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486111.5
CDS-3UTR TCA 90 bp TGCTATGTGTGTCTGAGTAACCATTGCTGGTGCAGGGGTATATGGACTCCCAATTGTTCTGGAGGTTGCTaGGAGGTCCAAAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: CYVCLSNHCWCRGIWTPNCSGGC*EVQNES
Trigger: ACTTTCATTTTGGACCTCTCAGCAACCTCCAGAACA...ATTGGGAGTCCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp TCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTGAAGACCAAAGTCTAACCACCTGTCTTAAATCCTaGAATGCATCTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: SATLASNAAISSEDQSLTTCLKS*NASWDL
Trigger: CAGGTCCCAAGATGCATTTCAGGATTTAAGACAGGT...GGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGCTTGTTTTCAAGGACTaGCTCTGGCATTATTTTTCA +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVLVFKD*LWHYFS
Trigger: TGAAAAATAATGCCAGAGTCAGTCCTTGAAAACAAG...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGGGTGGGCAGATCACCTaGGGTCAGGAGTTCGACACC +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMGGQIT*GQEFDT
Trigger: GGTGTCGAACTCCTGACCTCAGGTGATCTGCCCACC...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACACGTGTTCCATCTGTaGTCAAGTTTCCCCAATAGG +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETHVFHL*SSFPNR
Trigger: CCTATTGGGGAAACTTGATCACAGATGGAACACGTG...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCCAAAGTCTAACCTGCTaGAACAGCAAGGGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: HKNPTSQKINELHSHCQLQSLTC*NSKGQD
Trigger: GTCTTGCCCCTTGCTGTTTCAGCAGGTTAGACTTTG...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCTGCAGCTATAAGCAGTaGAGACCAAAGTCTAACCTG +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLCSYKQ*RPKSNL
Trigger: CAGGTTAGACTTTGGTCTTCACTGCTTATAGCTGCA...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACCTGTTTGGCACTTGGTaGCACAGGACTGATGCTAAT +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHLFGTW*HRTDAN
Trigger: ATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAG...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCAGTGAAGTATGGTAAGTaGCAAATGGCATGCATTGAA +
Preference number: 4 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPVKYGK*QMACIE
Trigger: TTCAATGCATGCCATTTGTCACTTACCATACTTCAC...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCCCAGGCCATGTGACATaGAGCTCGGCCATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIPGHVT*SSAMVK
Trigger: CTTCACCATGGCCGAGCTTCATGTCACATGGCCTGG...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CACTTGACTGGGGTAAGGTGGCACCAGTGGTCAGGTCTAAATTTGAAACTGATTTGTCTGAGTAACCATTaGTGGTGCAGGGGTATATGG +
Preference number: 4 (lower is better)
Translates to: HLTGVRWHQWSGLNLKLICLSNH*WCRGIW
Trigger: CCATATACCCCTGCACCAGCAATGGTTACTCAGACA...AATCAGTTTCAAATTTAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTGTAGGAGAAGTTCTTaGAGCTGGGCCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISACRRSS*SWARFC
Trigger: GCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCTACA...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCGGCGGGCCCTGGTTTTaGTGCTCATTTTGTCGATTT +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCGGPWF*CSFCRF
Trigger: AAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCC...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GAGATCATACAATTACTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATCCTCCAGAGAGCATTTaGCTGACTCCAGGCCAAACG +
Preference number: 4 (lower is better)
Translates to: EIIQLLQGTVGKQFGHRNPPESI*LTPGQT
Trigger: CGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGG...ATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAGTAATTGTATGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTATTTGGGGCCAGGAACTaGCCAGTTGCTAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLFGARN*PVAKAT
Trigger: AGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAA...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCTTTGGGGCCAGGAACTaGCCAGTTGCTAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVFGARN*PVAKAT
Trigger: AGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAA...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAAGCATGCCTCTCACTaGAGTACCAACAACATTCTA +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESKHASH*STNNIL
Trigger: TAGAATGTTGTTGGTACTGCAGTGAGAGGCATGCTT...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477292.5
ENST00000486111.5
CDS-3UTR GCA 90 bp AAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTGTTATATCATCTACTaGTCTGTTGGCCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: KAVQARKRNVRNTIVKDCCYIIY*SVGQTF
Trigger: GAAAGTCTGGCCAACAGAGCAGTAGATGATATAACA...GCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCCAGCAGTTCAATCTGTaGCCCTCAGCCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVQQFNL*PSATGL
Trigger: CAGTCCTGTGGCTGAGGGGCACAGATTGAACTGCTG...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCCCACAGGAAGGAGCCTaGACTTCCCCCATGGGATTT +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIPQEGA*TSPMGF
Trigger: AAATCCCATGGGGGAAGTGCAGGCTCCTTCCTGTGG...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGCTCGGCCTCCCAAAGTaGTACGATTACAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELLGLPK*YDYRRE
Trigger: CTCTCGCCTGTAATCGTAGCACTTTGGGAGGCCGAG...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGAGAGCCGGCGGGCCCTaGTTTTGCTGCTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELRAGGP*FCCSFC
Trigger: ACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCT...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AGGAGAAGTTCTTGCAGCTGGGCCCGCTTCTGCTTTATCCGTTCTATCCGCCTCATTGATGATTATGAATaGCAGCTGAATGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: RRSSCSWARFCFIRSIRLIDDYE*QLNGRV
Trigger: AACTCTACCATTCAGCTGCCATTCATAATCATCAAT...GAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCGTAAGGTGGCACCAGTaGTCAGGTCTAAATTTGAAA +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESVRWHQ*SGLNLK
Trigger: TTTCAAATTTAGACCTGACCACTGGTGCCACCTTAC...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAGTAAGGTGGCACCAGTaGTCAGGTCTAAATTTGAAA +
Preference number: 4 (lower is better)
Translates to: ALTLPTLQGLSPLSPQKAVRWHQ*SGLNLK
Trigger: TTTCAAATTTAGACCTGACCACTGGTGCCACCTTAC...TGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTGGACTGGTGACTGTTTaGGGCCAGGAACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLGLVTV*GQELPS
Trigger: ACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCC...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCGAGAGGCCGCACTGCTaGACTGGTGACTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFERPHC*TGDCLG
Trigger: CCCCAAACAGTCACCAGTCCAGCAGTGCGGCCTCTC...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp ATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGCATCTACTGCTCTGTTaGCCAGACTTTCATTCACAC +
Preference number: 4 (lower is better)
Translates to: ISALSKAVQARKRNVRNTHLLLC*PDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATG...CGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACAACAGCTCCCCTCTCCTaGGGACTTTTCATGTTCATT +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETTAPLS*GLFMFI
Trigger: AATGAACATGAAAAGTCCCCAGGAGAGGGGAGCTGT...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGTCACAAATTGCACACTaGGTGAGATCATACAATTAC +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVSQIAH*VRSYNY
Trigger: GTAATTGTATGATCTCACCCAGTGTGCAATTTGTGA...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTCCCAGTGTTCCTGACTaGTCTGAGAGGTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLPSVPD*SERCAP
Trigger: TGGAGCACACCTCTCAGACCAGTCAGGAACACTGGG...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAACACTGTTATCAACTaGGAATTTGAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLNTVIN*EFEGRE
Trigger: CTCCCTGCCCTCAAATTCCCAGTTGATAACAGTGTT...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAATACCCCTCAGCTGTTTaGCACTTGGTGACACAGGAC +
Preference number: 4 (lower is better)
Translates to: EHKNPTSQKINELHSHCQYPSAV*HLVTQD
Trigger: GTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGGTA...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTATGGTAAGTGACAAATaGCATGCATTGAAGCACGAC +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGMVSDK*HALKHD
Trigger: GTCGTGCTTCAATGCATGCCATTTGTCACTTACCAT...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp ATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGGGTTATTTGAATTGGTaGACTCTGACACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ISALSKAVQARKRNVRNTGYLNW*TLTPAH
Trigger: ATGAGCTGGTGTCAGAGTTCACCAATTCAAATAACC...CGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCGGTTATTTGAATTGGTaGACTCTGACACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QALACFPSLNEQGGSDVIGYLNW*TLTPAH
Trigger: ATGAGCTGGTGTCAGAGTTCACCAATTCAAATAACC...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TTCAGATCCTCCAGAGAGCATTTGCCTGACTCCAGGCCAAACGACATTCCCATCAGATGCTGCAATCTATaGCTGTTTTTCTGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: FRSSREHLPDSRPNDIPIRCCNL*LFFCLY
Trigger: ATACAAGCAGAAAAACAGTCATAGATTGCAGCATCT...GATGGGAATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGCAGAGAGCATTTGCCTaGCTCCAGGCCAAACGACAT +
Preference number: 4 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELQRAFA*LQAKRH
Trigger: ATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTG...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp ATAAACTCTTCGCCTAATGTTCTTCTGATCATAAGCCGAATCAGCAGCCAAATGCAGAGAGCATTTGCCTaGCTCCAGGCCAAACGACAT +
Preference number: 4 (lower is better)
Translates to: INSSPNVLLIISRISSQMQRAFA*LQAKRH
Trigger: ATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTG...CATTTGGCTGCTGATTCGGCTTATGATCAGAAGAACATTAGGCGAAGAGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTCAGAGAGCATTTGCCTaGCTCCAGGCCAAACGACAT +
Preference number: 4 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLQRAFA*LQAKRH
Trigger: ATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTG...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGATGAGCATCACATATTaGAACGTAGGCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTMSITY*NVGFLL
Trigger: CAAGAGAAAGCCTACGTTTCAATATGTGATGCTCAT...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACCCAATCCGTGCAGCTaGAAGATTCCCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLPNPCS*KIPCRP
Trigger: GGGCCTGCAGGGAATCTTTCAGCTGCACGGATTGGG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCGGCTGGGGTGGCCAATaGTGGGGCACCAATAAGGAT +
Preference number: 4 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFGWGGQ*WGTNKD
Trigger: ATCCTTATTGGTGCCCCATCATTGGCCACCCCAGCC...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTGGTCTTGAACTCCTaGGCTCAAGCAATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRLVLNS*AQAMCP
Trigger: CGGGCACATTGCTTGAGCTCAGGAGTTCAAGACCAG...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACATATGGCAGGAATAGCTaGGGTAGTTCTCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETYGRNS*GSSHSL
Trigger: CAGAGAATGAGAACTACCTCAGCTATTCCTGCCATA...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCAGAGGTTGCAGTGGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIRGCSG*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCCACTGCAACCTCT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAAGCAAAAGGTAAGATaGCAAGATCCGGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLKQKVR*QDPVLS
Trigger: AGACAAGACCGGATCTTGTCATCTTACCTTTTGCTT...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCCTGTTTGGCACTTGGTaGCACAGGACTGATGCTAAT +
Preference number: 4 (lower is better)
Translates to: HKNPTSQKINELHSHCQLLFGTW*HRTDAN
Trigger: ATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAG...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GAGATCATACAATTACTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATCGGGGTTTTCTGACTTaGGAGAGGCCTAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: EIIQLLQGTVGKQFGHRNRGFLT*ERPKPD
Trigger: GTCAGGTTTAGGCCTCTCTCAAGTCAGAAAACCCCG...ATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAGTAATTGTATGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCCAGCCCGGGGTTTTCTaGCTTGAGAGAGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIQPGVF*LERGLN
Trigger: GTTTAGGCCTCTCTCAAGTCAGAAAACCCCGGGCTG...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTGTGAAGTATGGTAAGTaGCAAATGGCATGCATTGAA +
Preference number: 4 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGVKYGK*QMACIE
Trigger: TTCAATGCATGCCATTTGTCACTTACCATACTTCAC...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGCTCAGTACTGAAACGTaGTCCCCGGAGTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMLSTET*SPECSH
Trigger: GTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAG...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCGAAGGAACTCAGTACTaGAACGTGATCCCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAEGTQY*NVIPGV
Trigger: CACTCCGGGGATCACGTTTCAGTACTGAGTTCCTTC...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCAGCTGGGCCCGCTTCTaGTTTATCCGTTCTATCCGC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIISWARF*FIRSIR
Trigger: GCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAAGCTGGGCCCGCTTCTaGTTTATCCGTTCTATCCGC +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISSWARF*FIRSIR
Trigger: GCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCT...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCAGCTGGGCCCGCTTCTaGTTTATCCGTTCTATCCGC +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFISWARF*FIRSIR
Trigger: GCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCT...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACGGCGGGCCCTGGTTTTaGTGCTCATTTTGTCGATTT +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHGGPWF*CSFCRF
Trigger: AAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCC...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCCTCCAGAGAGCATTTaGCTGACTCCAGGCCAAACG +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLPPESI*LTPGQT
Trigger: CGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGG...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp TACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCCCTCCAGAGAGCATTTaGCTGACTCCAGGCCAAACG +
Preference number: 4 (lower is better)
Translates to: YCSVGQTFIHTMLTFISIPPESI*LTPGQT
Trigger: CGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGG...GATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAAGTGAGAGGCCGCACTaGTGGACTGGTGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISSERPH*WTGDCL
Trigger: CAAACAGTCACCAGTCCAGCAGTGCGGCCTCTCACT...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATAGTGAGAGGCCGCACTaGTGGACTGGTGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNSERPH*WTGDCL
Trigger: CAAACAGTCACCAGTCCAGCAGTGCGGCCTCTCACT...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGTGTTATATCATCTACTaGTCTGTTGGCCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTCYIIY*SVGQTF
Trigger: GAAAGTCTGGCCAACAGAGCAGTAGATGATATAACA...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGTCTCCTCAGAAAGCATaGTTTCTTTGTTATATCATC +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVSPQKA*FLCYII
Trigger: GATGATATAACAAAGAAAGCATGCTTTCTGAGGAGA...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCCAGCAGTTCAATCTGTaGCCCTCAGCCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: YCSVGQTFIHTMLTFISIQQFNL*PSATGL
Trigger: CAGTCCTGTGGCTGAGGGGCACAGATTGAACTGCTG...GATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCCACAGGAAGGAGCCTaGACTTCCCCCATGGGATTT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIPQEGA*TSPMGF
Trigger: AAATCCCATGGGGGAAGTGCAGGCTCCTTCCTGTGG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTCGGCCTCCCAAAGTaGTACGATTACAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRLGLPK*YDYRRE
Trigger: CTCTCGCCTGTAATCGTAGCACTTTGGGAGGCCGAG...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGACAACCTCCGCCTCCTaGGCTCAAGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMTTSAS*AQAILP
Trigger: TGGGAGGATTGCTTGAGCGCAGGAGGCGGAGGTTGT...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCAACATACACACTGTGTaGTGGAGGGAGCCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCNIHTV*WREPKS
Trigger: TGACTTAGGCTCCCTCCAGCACACAGTGTGTATGTT...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTTGCCCAGGCTGGAGTaGAAATGGCACGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIILPRLE*KWHDLS
Trigger: GCTGAGATCGTGCCATTTGCACTCCAGCCTGGGCAA...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTGGTGCAGGGGTATATaGACTCCCAATCAGAACACT +
Preference number: 4 (lower is better)
Translates to: HKNPTSQKINELHSHCQLWCRGI*TPNQNT
Trigger: AGTGTTCTGATTGGGAGTCCATATACCCCTGCACCA...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGAGAGCCGGCGGGCCCTaGTTTTGCTGCTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRRAGGP*FCCSFC
Trigger: ACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCT...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTGACTGGGGTAAGGTaGCACCAGTGGTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISALTGVR*HQWSGL
Trigger: TAGACCTGACCACTGGTGCCACCTTACCCCAGTCAA...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTGGTTTACACTTGACTaGGGTAAGGTGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGWFTLD*GKVAPV
Trigger: CACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCA...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCGGACTGGTGACTGTTTaGGGCCAGGAACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFGLVTV*GQELPS
Trigger: ACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCC...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGGGACTGGTGACTGTTTaGGGCCAGGAACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMGLVTV*GQELPS
Trigger: ACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCC...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGAATGTTGCCTTTTGTTaGACTGAGATTCTGATCTAT +
Preference number: 4 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVNVAFC*TEILIY
Trigger: ATAGATCAGAATCTCAGTCCAACAAAAGGCAACATT...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR CCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTAGTCAGGGTCTGGCCATaGTGGCAGGTGTCCCTACAC +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLVRVWP*WQVSLH
Trigger: GTGTAGGGACACCTGCCACCATGGCCAGACCCTGAC...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGAAAATTAGCCAGGCATaGTCCCAGCTGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELKISQA*SQLRQE
Trigger: CTCCTGCCTCAGCTGGGACCATGCCTGGCTAATTTT...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCAAGCCAAAAAGAGTTGTaGTTTAGCAAACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPSQKEL*FSKQSS
Trigger: ACTTGACTGTTTGCTAAACCACAACTCTTTTTGGCT...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTAGACAGGCTGAGGGATaGGAGGCAAGTCAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSRQAEG*EASQAL
Trigger: AAGAGCTTGACTTGCCTCCCATCCCTCAGCCTGTCT...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATATGGTAAGTGACAAATaGCATGCATTGAAGCACGAC +
Preference number: 4 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDMVSDK*HALKHD
Trigger: GTCGTGCTTCAATGCATGCCATTTGTCACTTACCAT...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp GACCATTGCTTTGGGTGCATGAATATGGGAACCCATTaGGGAAAACGGTTCTTAGAAGTCCAGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: DHCFGCMNMGTH*GKRFLEVQSSA
Trigger: AGCTGATGACTGGACTTCTAAGAACCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCATTATGAATGGCAGCTaGATGGTAGAGTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCIMNGS*MVEFRA
Trigger: GGCTCTGAACTCTACCATTCAGCTGCCATTCATAAT...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCAGAGAGCATTTGCCTaGCTCCAGGCCAAACGACAT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIQRAFA*LQAKRH
Trigger: ATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp CACTTGACTGGGGTAAGGTGGCACCAGTGGTCAGGTCTAAATTTGAAACTGATTTTCAGAAGTAGTCCCTaGTTTAACCAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: HLTGVRWHQWSGLNLKLIFRSSP*FNQEGP
Trigger: AGGACCTTCTTGGTTAAATCAGGGACTACTTCTGAA...AATCAGTTTCAAATTTAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTTCAGAAGTAGTCCCTaGTTTAACCAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHFRSSP*FNQEGP
Trigger: AGGACCTTCTTGGTTAAATCAGGGACTACTTCTGAA...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp ATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATAATTACATGGGTGTaGGGAACACAAAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: ISALSKAVQARKRNVRNTIITWV*GTQKSH
Trigger: GTGGGATTTTTGTGTTCCTCACACCCATGTAATTAT...CGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACCAGTGGTCAGGTCTAAATTTGAAACTGATTGGGTAGAGTTCAGAAGTAGTTCTCTGCTTCAAAGATaGTGCCTTCTGGTTGCATCC +
Preference number: 4 (lower is better)
Translates to: APVVRSKFETDWVEFRSSSLLQR*CLLVAS
Trigger: GGATGCAACCAGAAGGCATCATCTTTGAAGCAGAGA...ACTACTTCTGAACTCTACCCAATCAGTTTCAAATTTAGACCTGACCACTGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCGTGTTAGCATGGTGGTaGGGCTATAAAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVVLAWW*GYKEAP
Trigger: TGGTGCCTCTTTATAGCCTCACCACCATGCTAACAC...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTACCCAAACACAACGCTaGGGAAGGAGACCATTTCCC +
Preference number: 4 (lower is better)
Translates to: AHGNAILFWLPEVALVNSTQTQR*GRRPFP
Trigger: GGGAAATGGTCTCCTTCCTCAGCGTTGTGTTTGGGT...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACCACTTTGATCTTGTGTaGAATTGTGACTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHHFDLV*NCDSVL
Trigger: CAGCACTGAGTCACAATTTCACACAAGATCAAAGTG...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAAGCACGACAAGGGATaGGTTTTTAAATCCAAACGT +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLKHDKG*VFKSKR
Trigger: ACGTTTGGATTTAAAAACTCATCCCTTGTCGTGCTT...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACCATTTTTCAGGACACTaGGAGGTTGAACCTGCCATG +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHHFSGH*EVEPAM
Trigger: CATGGCAGGTTCAACCTCTCAGTGTCCTGAAAAATG...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAATGTCTGAGTAACCATTaGTGGTGCAGGGGTATATGG +
Preference number: 4 (lower is better)
Translates to: EHKNPTSQKINELHSHCQCLSNH*WCRGIW
Trigger: CCATATACCCCTGCACCAGCAATGGTTACTCAGACA...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCTGTAGGAGAAGTTCTTaGAGCTGGGCCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFCRRSS*SWARFC
Trigger: GCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCTACA...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAAGGGCCCTGGTTTTGCTaGTCATTTTGTCGATTTCTC +
Preference number: 4 (lower is better)
Translates to: EHKNPTSQKINELHSHCQGPWFC*SFCRFL
Trigger: GAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCC...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATAGGGCCCTGGTTTTGCTaGTCATTTTGTCGATTTCTC +
Preference number: 4 (lower is better)
Translates to: QKHDRQGLLRVAISILRIGPWFC*SFCRFL
Trigger: GAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCC...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCGGCGGGCCCTGGTTTTaGTGCTCATTTTGTCGATTT +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVGGPWF*CSFCRF
Trigger: AAATCGACAAAATGAGCAGCAAAACCAGGGCCCGCC...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp AAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTTCATTTTCACAAATTaGACACTGGGTGAGATCATA +
Preference number: 4 (lower is better)
Translates to: KAVQARKRNVRNTIVKDCFIFTN*TLGEII
Trigger: TATGATCTCACCCAGTGTGCAATTTGTGAAAATGAA...GCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACAACATACACACTGTGTaGTGGAGGGAGCCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHNIHTV*WREPKS
Trigger: TGACTTAGGCTCCCTCCAGCACACAGTGTGTATGTT...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AACCACAACTTCTCTGGATGTGAGTGGGCCATGCTGGCAACAAGCTTAACTTCACATGAGCTTCTTGTATaGACGCTTGTTTTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: NHNFSGCEWAMLATSLTSHELLV*TLVFLR
Trigger: TCTTAGGAAAACAAGCGTGCATACAAGAAGCTCATG...TGAAGTTAAGCTTGTTGCCAGCATGGCCCACTCACATCCAGAGAAGTTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494656.3
CDS-3UTR CCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGTTGACTGGGGTAAGGTaGCACCAGTGGTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRLTGVR*HQWSGL
Trigger: TAGACCTGACCACTGGTGCCACCTTACCCCAGTCAA...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCTGGTTTACACTTGACTaGGGTAAGGTGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIWFTLD*GKVAPV
Trigger: CACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCA...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTCCAAGCATAACCCTTaGTTTACACTTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: HKNPTSQKINELHSHCQLSKHNP*FTLDWG
Trigger: ACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGA...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCTCACAAATTGCACACTaGGTGAGATCATACAATTAC +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESSQIAH*VRSYNY
Trigger: GTAATTGTATGATCTCACCCAGTGTGCAATTTGTGA...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCAGCCAAAAAGAGTTGTaGTTTAGCAAACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: CTHTANSSGIIPTISSESSQKEL*FSKQSS
Trigger: ACTTGACTGTTTGCTAAACCACAACTCTTTTTGGCT...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCAACACTGTTATCAACTaGGAATTTGAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HKNPTSQKINELHSHCQLNTVIN*EFEGRE
Trigger: CTCCCTGCCCTCAAATTCCCAGTTGATAACAGTGTT...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTTCTCAGAGACGTTTTaGTTAAGGGACTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHFSETF*LRDYFL
Trigger: CAGGAAGTAGTCCCTTAACCAAAACGTCTCTGAGAA...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAGATCATACAATTACTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTGTCAGAGAAGTTTCTaGACCTGTCAGGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: EIIQLLQGTVGKQFGHRNCQRSF*TCQGLP
Trigger: TGGGAGTCCCTGACAGGTCCAGAAACTTCTCTGACA...ATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAGTAATTGTATGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAAGAAGCTCTGGGTTTTaGTGCAGGCTCTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISRSSGF*CRLCHR
Trigger: TCTGTGGCAGAGCCTGCACCAAAACCCAGAGCTTCT...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCAATCCAAAACCCATCTaGGAGGACTGTGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISANPKPI*EDCGDS
Trigger: GCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATT...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGTACCCCTCAGCTGTTTaGCACTTGGTGACACAGGAC +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRYPSAV*HLVTQD
Trigger: GTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGGTA...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTCAGCACCAGCTGGTGTaGTGTGGAAGGACCAGTTGG +
Preference number: 4 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPQHQLV*CGRTSW
Trigger: CCAACTGGTCCTTCCACACCACACCAGCTGGTGCTG...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp CAGGTTTCCCAAGAACTCTGGCAAGAATGTTGCTACTaGGTGAAGGAATGGTTATCATTAGTGCACCTGTCT +
Preference number: 4 (lower is better)
Translates to: QVSQELWQECCY*VKEWLSLVHLS
Trigger: AGACAGGTGCACTAATGATAACCATTCCTTCACCAAGTAGCAACATTCTTGCCAGAGTTCTTGGGAAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTATGTGTGTCTGAGTAACCATTGCTGGTGCAGGGGTATATGGACTCCCAATGTTGGACTGAGATTCTaGTCTATAAATCCTCTTACT +
Preference number: 4 (lower is better)
Translates to: CYVCLSNHCWCRGIWTPNVGLRF*SINPLT
Trigger: AGTAAGAGGATTTATAGATCAGAATCTCAGTCCAAC...ATTGGGAGTCCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACCTCACACACTTTCATTaGAAAGTGTCTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHLTHFH*KVSQAF
Trigger: AAAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAG...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CACTTGACTGGGGTAAGGTGGCACCAGTGGTCAGGTCTAAATTTGAAACTGATTCTCACACACTTTCATTaGAAAGTGTCTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HLTGVRWHQWSGLNLKLILTHFH*KVSQAF
Trigger: AAAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAG...AATCAGTTTCAAATTTAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp AATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGTTGTACCTTTTCGTTaGACTTTCTCACACACTTTC +
Preference number: 4 (lower is better)
Translates to: NPTSQKINELHSHCQLFRVVPFR*TFSHTF
Trigger: GAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAAC...CCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CACTTGACTGGGGTAAGGTGGCACCAGTGGTCAGGTCTAAATTTGAAACTGATTGTTGTACCTTTTCGTTaGACTTTCTCACACACTTTC +
Preference number: 4 (lower is better)
Translates to: HLTGVRWHQWSGLNLKLIVVPFR*TFSHTF
Trigger: GAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAAC...AATCAGTTTCAAATTTAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACAGTTGTACCTTTTCGTTaGACTTTCTCACACACTTTC +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETVVPFR*TFSHTF
Trigger: GAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAAC...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGCAGAGAGCATTTGCCTaGCTCCAGGCCAAACGACAT +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMQRAFA*LQAKRH
Trigger: ATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTG...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACCTGTGGAGATATCTGTaGTATAACCTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHLWRYL*YNLLKP
Trigger: AGGCTTTAGAAGGTTATATCACAGATATCTCCACAG...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGCTGTGGAGATATCTGTaGTATAACCTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: NPTSQKINELHSHCQLFRLWRYL*YNLLKP
Trigger: AGGCTTTAGAAGGTTATATCACAGATATCTCCACAG...CCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACATGAGCATCACATATTaGAACGTAGGCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHMSITY*NVGFLL
Trigger: CAAGAGAAAGCCTACGTTTCAATATGTGATGCTCAT...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATTTCTCTAGTTTTCACTaGACACACAGTGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDFSSFH*THSANK
Trigger: TTTGTTTGCACTGTGTGTTCAGTGAAAACTAGAGAA...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCTTCTCTAGTTTTCACTaGACACACAGTGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLFSSFH*THSANK
Trigger: TTTGTTTGCACTGTGTGTTCAGTGAAAACTAGAGAA...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCCTTGTTTTCAAGGACTaGCTCTGGCATTATTTTTCA +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLLVFKD*LWHYFS
Trigger: TGAAAAATAATGCCAGAGTCAGTCCTTGAAAACAAG...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATTCCAAAATGAAGGCTTaGAACTGGAACAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNSKMKA*NWNSGA
Trigger: GGCCCCACTGTTCCAGTTTCAAGCCTTCATTTTGGA...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCATCTCAGCACCCTGGTaGATGGGTGTCAGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIISAPW*MGVREV
Trigger: AACTTCTCTGACACCCATTCACCAGGGTGCTGAGAT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCAAAGTCTAACCTGCTaGAACAGCAAGGGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNQSLTC*NSKGQD
Trigger: GTCTTGCCCCTTGCTGTTTCAGCAGGTTAGACTTTG...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GAGATCATACAATTACTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATGAAGCTCGGCCATGGTaGAGTATGGTAAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: EIIQLLQGTVGKQFGHRNEARPW*SMVSDK
Trigger: TTTGTCACTTACCATACTTCACCATGGCCGAGCTTC...ATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAGTAATTGTATGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCAGTGACGTTTTAGTATaGAAATCCTGGCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGSDVLV*KSWPQC
Trigger: ACACTGGGGCCAGGATTTTCATACTAAAACGTCACT...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCGGTGAACCAAGTGCGTaGAGGAACTCAGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAGEPSA*RNSVLK
Trigger: TTTCAGTACTGAGTTCCTTCACGCACTTGGTTCACC...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGTAGCTTCTGCTATGTGTGTCTGAGTAACCATTGCTGGTGCAGGGGTATATGGAAATCCTCTTACTTCTaGATTTGTGGAAGTCAAACC +
Preference number: 4 (lower is better)
Translates to: SSFCYVCLSNHCWCRGIWKSSYF*ICGSQT
Trigger: GGTTTGACTTCCACAAATGCAGAAGTAAGAGGATTT...CCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCAGAAGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTGTCTGAGTAACCATTaGTGGTGCAGGGGTATATGG +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISACLSNH*WCRGIW
Trigger: CCATATACCCCTGCACCAGCAATGGTTACTCAGACA...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCCGTTCTATCCGCCTCTaGTTCTCTATCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIRSIRL*FSISRF
Trigger: GAATCTGGAGATAGAGAAGCAGAGGCGGATAGAACG...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGGGGCCCTGGTTTTGCTaGTCATTTTGTCGATTTCTC +
Preference number: 4 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELGPWFC*SFCRFL
Trigger: GAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCC...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ATAAACTCTTCGCCTAATGTTCTTCTGATCATAAGCCGAATCAGCAGCCAAATGATGATGCCTTCTGGTTaGATCCATTTGGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: INSSPNVLLIISRISSQMMMPSG*IHLGSN
Trigger: GTTGGACCCCAAATGGATGCAACCAGAAGGCATCAT...CATTTGGCTGCTGATTCGGCTTATGATCAGAAGAACATTAGGCGAAGAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR GCA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCATAAACAACATAACTaGACTACCATATATCCAGGC +
Preference number: 4 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDHKQHN*TTIYPG
Trigger: GCCTGGATATATGGTAGTGCAGTTATGTTGTTTATG...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACAGTAAAAGAGGAGGCTaGCCCTTAAAGGACAGTTTG +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHSKRGG*PLKDSL
Trigger: CAAACTGTCCTTTAAGGGGCAGCCTCCTCTTTTACT...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAAGCTCATTGCAACTTTTaGCTCCTGGGTTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: EHKNPTSQKINELHSHCQAHCNF*LLGSRD
Trigger: ATCTCTTGAACCCAGGAGGCAAAAGTTGCAATGAGC...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTGAACACTTCCTGAACTaGTTAGTCTCTGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSEHFLN*LVSVVC
Trigger: GCACACCACAGAGACTAACCAGTTCAGGAAGTGTTC...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTATGGTGCAGGGGTATATaGACTCCCAATCAGAACACT +
Preference number: 4 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLWCRGI*TPNQNT
Trigger: AGTGTTCTGATTGGGAGTCCATATACCCCTGCACCA...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATAAACTCTTCGCCTAATGTTCTTCTGATCATAAGCCGAATCAGCAGCCAAATGTGGTGCAGGGGTATATaGACTCCCAATCAGAACACT +
Preference number: 4 (lower is better)
Translates to: INSSPNVLLIISRISSQMWCRGI*TPNQNT
Trigger: AGTGTTCTGATTGGGAGTCCATATACCCCTGCACCA...CATTTGGCTGCTGATTCGGCTTATGATCAGAAGAACATTAGGCGAAGAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CCA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTAGAGCCGGCGGGCCCTaGTTTTGCTGCTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPRAGGP*FCCSFC
Trigger: ACAAAATGAGCAGCAAAACCAGGGCCCGCCGGCTCT...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTTGGTTTACACTTGACTaGGGTAAGGTGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: AHGNAILFWLPEVALVNSWFTLD*GKVAPV
Trigger: CACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCA...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGTGGTTTACACTTGACTaGGGTAAGGTGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRWFTLD*GKVAPV
Trigger: CACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCA...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCCTCTTGTCTTTATTCTaGGGAGGAGGAATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVLLSLF*GGGILL
Trigger: GAGGAGGATTCCTCCTCCCCAGAATAAAGACAAGAG...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTCCAGATTTAGGATGCTaGCAAAGGCAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: AHGNAILFWLPEVALVNSPDLGC*QRQCWQ
Trigger: TTGCCAGCACTGCCTTTGCCAGCATCCTAAATCTGG...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCAGGAAATAAGCACGTaGAGGACACAGACTGACAGC +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIQEIST*RTQTDS
Trigger: GCTGTCAGTCTGTGTCCTCCACGTGCTTATTTCCTG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTGGGGACCATTGCTTTaGGTGCATGAATATGGGAAC +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAWGPLL*VHEYGN
Trigger: GTTCCCATATTCATGCACCCAAAGCAATGGTCCCCA...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACGTCATTCAAATGGCATaGTGCAGGCTCCTGATACAT +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHVIQMA*CRLLIH
Trigger: ATGTATCAGGAGCCTGCACCATGCCATTTGAATGAC...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACCAGCTGGTGTGGTGTaGAAGGACCAGTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLPAGVV*KDQLVT
Trigger: AGTGACCAACTGGTCCTTCCACACCACACCAGCTGG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGAATCCAAACGTGATCTaGGGAATTTTCCGTTATGAT +
Preference number: 4 (lower is better)
Translates to: ISALSKAVQARKRNVRNTNPNVI*GIFRYD
Trigger: ATCATAACGGAAAATTCCCCAGATCACGTTTGGATT...CGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCGCAACTTTTGCCTCCTaGGTTCAAGAGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAATFAS*VQEILL
Trigger: CAGGAGAATCTCTTGAACCCAGGAGGCAAAAGTTGC...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAGATCATACAATTACTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATAGTGGTTTGGGCTCATaGCCCTTTACCCACCTTTTT +
Preference number: 4 (lower is better)
Translates to: EIIQLLQGTVGKQFGHRNSGLGS*PFTHLF
Trigger: AAAAAGGTGGGTAAAGGGCCATGAGCCCAAACCACT...ATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAGTAATTGTATGATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCGCAAGTCAGATGTGGTaGTTGCATTTTCCTCTTATC +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCASQMW*LHFPLI
Trigger: GATAAGAGGAAAATGCAACCACCACATCTGACTTGC...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AACTTCTCTGGATGTGAGTGGGCCATGCTGGCAACAAGCTTAACTTCAGGTTGTGAGGAAAACCTGTTCTaGGGCATACTAAAATTCTTA +
Preference number: 4 (lower is better)
Translates to: NFSGCEWAMLATSLTSGCEENLF*GILKFL
Trigger: TAAGAATTTTAGTATGCCCCAGAACAGGTTTTCCTC...ACAACCTGAAGTTAAGCTTGTTGCCAGCATGGCCCACTCACATCCAGAGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494656.3
3UTR CAA 72 bp CCAATTTGGGCCATGCTTGGTGCATCTAGCATAATCTaGGGACAAATCCACATGATTCAGGTCAAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PIWAMLGASSII*GQIHMIQVKVL
Trigger: CAAAACTTTGACCTGAATCATGTGGATTTGTCCCAAGATTATGCTAGATGCACCAAGCATGGCCCAAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp GAGAGATTCCAAGTGCATGTTATGGGACAGAGTGGCTaGTTAAGAAAGTATAGAGACATCTGTCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: ERFQVHVMGQSG*LRKYRDICLST
Trigger: GGTGGAAAGACAGATGTCTCTATACTTTCTTAACAAGCCACTCTGTCCCATAACATGCACTTGGAATCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp TGGAAATTTAATCAAACACTGTTATCAACTGGGAATTaGAGGGCAGGGAGGCACATTGCTGAGGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: WKFNQTLLSTGN*RAGRHIAEGHS
Trigger: TGAATGACCCTCAGCAATGTGCCTCCCTGCCCTCAAATTCCCAGTTGATAACAGTGTTTGATTAAATTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCGTTGTACCTTTTCGTTaGACTTTCTCACACACTTTC +
Preference number: 4 (lower is better)
Translates to: HKNPTSQKINELHSHCQLVVPFR*TFSHTF
Trigger: GAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAAC...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp ATAAACTCTTCGCCTAATGTTCTTCTGATCATAAGCCGAATCAGCAGCCAAATGATTATGAATGGCAGCTaGATGGTAGAGTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: INSSPNVLLIISRISSQMIMNGS*MVEFRA
Trigger: GGCTCTGAACTCTACCATTCAGCTGCCATTCATAAT...CATTTGGCTGCTGATTCGGCTTATGATCAGAAGAACATTAGGCGAAGAGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR TCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACAGAGAGCATTTGCCTaGCTCCAGGCCAAACGACAT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLQRAFA*LQAKRH
Trigger: ATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCTGTGGAGATATCTGTaGTATAACCTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCLWRYL*YNLLKP
Trigger: AGGCTTTAGAAGGTTATATCACAGATATCTCCACAG...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCCTCACAGAAGATAAATaGGTTGCACTCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYILTEDK*VALTLP
Trigger: TGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAG...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTCACAGAAGATAAATaGGTTGCACTCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSLTEDK*VALTLP
Trigger: TGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAG...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTGAGAAGGAGCAGCTGTaGATACACCACTGCAGTATT +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLEKEQL*IHHCSI
Trigger: AATACTGCAGTGGTGTATTCACAGCTGCTCCTTCTC...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCCACTTTGATCTTGTGTaGAATTGTGACTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGHFDLV*NCDSVL
Trigger: CAGCACTGAGTCACAATTTCACACAAGATCAAAGTG...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTTGGAGTGCAGTGGTGTaGTCTTGGCTCTACAACCTC +
Preference number: 4 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPWSAVV*SWLYNL
Trigger: GAGGTTGTAGAGCCAAGATCACACCACTGCACTCCA...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTGTCTTTCCACCATCTaGCTCAGTAAAACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGCLSTI*LSKTVS
Trigger: AGAGACAGTTTTACTGAGTCAGATGGTGGAAAGACA...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGATTGCTTTGGGTGCATaGATATGGGAACCCATTTGG +
Preference number: 4 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELIALGA*IWEPIW
Trigger: CCAAATGGGTTCCCATATTCATGCACCCAAAGCAAT...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGAGGGAGGCACATTGCTaGGGGTCATTCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMREAHC*GSFKWH
Trigger: ATGCCATTTGAATGACCCTCAGCAATGTGCCTCCCT...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTAGATCCGGTCTTGTCTaGGAACAGCTGCACAGAATA +
Preference number: 4 (lower is better)
Translates to: AHGNAILFWLPEVALVNSRSGLV*EQLHRI
Trigger: TATTCTGTGCAGCTGTTCTCAGACAAGACCGGATCT...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACGGGGTTTTCTGACTTaGGAGAGGCCTAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLRGFLT*ERPKPD
Trigger: GTCAGGTTTAGGCCTCTCTCAAGTCAGAAAACCCCG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCATTTTTCAGGACACTaGGAGGTTGAACCTGCCATG +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIHFSGH*EVEPAM
Trigger: CATGGCAGGTTCAACCTCTCAGTGTCCTGAAAAATG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCATGTCTGAGTAACCATTaGTGGTGCAGGGGTATATGG +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISCLSNH*WCRGIW
Trigger: CCATATACCCCTGCACCAGCAATGGTTACTCAGACA...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCCGTTCTATCCGCCTCTaGTTCTCTATCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIRSIRL*FSISRF
Trigger: GAATCTGGAGATAGAGAAGCAGAGGCGGATAGAACG...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTGGGCCCTGGTTTTGCTaGTCATTTTGTCGATTTCTC +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLGPWFC*SFCRFL
Trigger: GAGAAATCGACAAAATGAGCAGCAAAACCAGGGCCC...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTGAGTTGCACTCACACTaGCAACTCTTCAGGGATTAT +
Preference number: 4 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLELHSH*QLFRDY
Trigger: ATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTC...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TCATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACATAAACAACATAACTaGACTACCATATATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SFLPCQRQSRQGRETSETHKQHN*TTIYPG
Trigger: GCCTGGATATATGGTAGTGCAGTTATGTTGTTTATG...TGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AGTTTACATGAGCTTCTTGTATGCACGCTTGTTTTCCTAAGAAGGTTCCCCCACTCCCACAAATACAAATaGCAGTATGAGGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: SLHELLVCTLVFLRRFPHSHKYK*QYEENL
Trigger: CAGGTTTTCCTCATACTGGCATTTGTATTTGTGGGA...GTGGGGGAACCTTCTTAGGAAAACAAGCGTGCATACAAGAAGCTCATGTAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494656.3
CDS-3UTR CCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCACTGAGTAACCATTGCTaGTGCAGGGGTATATGGACT +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISLSNHC*CRGIWT
Trigger: AGTCCATATACCCCTGCACCAGCAATGGTTACTCAG...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATATTGATGATTATGAATaGCAGCTGAATGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDIDDYE*QLNGRV
Trigger: AACTCTACCATTCAGCTGCCATTCATAATCATCAAT...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTCCAAGCATAACCCTTaGTTTACACTTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISASKHNP*FTLDWG
Trigger: ACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGA...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCACTCTTGTCTTTATTCTaGGGAGGAGGAATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISLLSLF*GGGILL
Trigger: GAGGAGGATTCCTCCTCCCCAGAATAAAGACAAGAG...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCCTCTTGTCTTTATTCTaGGGAGGAGGAATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIILLSLF*GGGILL
Trigger: GAGGAGGATTCCTCCTCCCCAGAATAAAGACAAGAG...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTACATCTACTGCTCTGTTaGCCAGACTTTCATTCACAC +
Preference number: 4 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLHLLLC*PDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATG...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCCCAGATTTAGGATGCTaGCAAAGGCAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFPDLGC*QRQCWQ
Trigger: TTGCCAGCACTGCCTTTGCCAGCATCCTAAATCTGG...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCAAGGACAGTTTGGTTTaGAGGGAAATCCCAATCCGT +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIKDSLV*REIPIR
Trigger: ACGGATTGGGATTTCCCTCCAAACCAAACTGTCCTT...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACGTTTCCCAAGAACTCTaGCAAGAATGTTGCTACTTG +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHVSQEL*QECCYL
Trigger: CAAGTAGCAACATTCTTGCCAGAGTTCTTGGGAAAC...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTAAAATTAGCCAGGCATaGTCCCAGCTGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPKISQA*SQLRQE
Trigger: CTCCTGCCTCAGCTGGGACCATGCCTGGCTAATTTT...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTACTATTTCAGACTTGTTaGGCAGGGACAGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLLFQTC*AGTAHF
Trigger: AAAATGGGCTGTCCCTGCCCAACAAGTCTGAAATAG...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCCATAGTGTGGGTCTTTaGGAAATGCATATTAGTTTT +
Preference number: 4 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLHSVGL*EMHISF
Trigger: AAAACTAATATGCATTTCCCAAAGACCCACACTATG...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCTTCTTTAGCATACTGTaGAGTGAGACATGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: EEHKNPTSQKINELHSHCFFSIL*SETCGK
Trigger: TTTCCCACATGTCTCACTCCACAGTATGCTAAAGAA...GCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTGGGCAAGTCAGATGTaGTGGTTGCATTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAWASQM*WLHFPL
Trigger: AAGAGGAAAATGCAACCACCACATCTGACTTGCCCA...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCGGTTATTTGAATTGGTaGACTCTGACACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVGYLNW*TLTPAH
Trigger: ATGAGCTGGTGTCAGAGTTCACCAATTCAAATAACC...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCATTATGAATGGCAGCTaGATGGTAGAGTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIIMNGS*MVEFRA
Trigger: GGCTCTGAACTCTACCATTCAGCTGCCATTCATAAT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTATTATGAATGGCAGCTaGATGGTAGAGTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLIMNGS*MVEFRA
Trigger: GGCTCTGAACTCTACCATTCAGCTGCCATTCATAAT...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATTATGAATGGCAGCTaGATGGTAGAGTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AHGNAILFWLPEVALVNSIMNGS*MVEFRA
Trigger: GGCTCTGAACTCTACCATTCAGCTGCCATTCATAAT...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATTATGAATGGCAGCTaGATGGTAGAGTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: YCSVGQTFIHTMLTFISIIMNGS*MVEFRA
Trigger: GGCTCTGAACTCTACCATTCAGCTGCCATTCATAAT...GATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCTGGGACAAATCCACATaGTTCAGGTCAAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVWDKST*FRSKFW
Trigger: CCAAAACTTTGACCTGAATCATGTGGATTTGTCCCA...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAACCTGTCTTAAATCCTaGAATGCATCTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISTCLKS*NASWDL
Trigger: CAGGTCCCAAGATGCATTTCAGGATTTAAGACAGGT...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATAAAACAGACTCCAAAATaGAGGCTTGAAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: QKHDRQGLLRVAISILRIKQTPK*RLETGT
Trigger: TGTTCCAGTTTCAAGCCTTCATTTTGGAGTCTGTTT...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTGTGTGGTCAACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLVWSTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTTGACCACAC...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTAAGCAAAAGGTAAGATaGCAAGATCCGGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLKQKVR*QDPVLS
Trigger: AGACAAGACCGGATCTTGTCATCTTACCTTTTGCTT...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGGGGAATTTTCCGTTATaGTTCGACAGACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMGNFPL*FDRHGQ
Trigger: CTGCCCATGTCTGTCGAATCATAACGGAAAATTCCC...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGACAAATGGCATGCATTaGAGCACGACAAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMTNGMH*STTRDE
Trigger: CTCATCCCTTGTCGTGCTTCAATGCATGCCATTTGT...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCCCAGCCAGTAGCTTCTaGTATGTGTGTCTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFPASSF*YVCLSN
Trigger: GTTACTCAGACACACATAGCAGAAGCTACTGGCTGG...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGCCAGCCAGTAGCTTCTaGTATGTGTGTCTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMPASSF*YVCLSN
Trigger: GTTACTCAGACACACATAGCAGAAGCTACTGGCTGG...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGCGTTCTATCCGCCTCTaGTTCTCTATCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMRSIRL*FSISRF
Trigger: GAATCTGGAGATAGAGAAGCAGAGGCGGATAGAACG...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGTTATATCATCTACTaGTCTGTTGGCCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: CEEHKNPTSQKINELHSHCYIIY*SVGQTF
Trigger: GAAAGTCTGGCCAACAGAGCAGTAGATGATATAACA...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGTCTCCTCAGAAAGCATaGTTTCTTTGTTATATCATC +
Preference number: 4 (lower is better)
Translates to: NPTSQKINELHSHCQLFRSPQKA*FLCYII
Trigger: GATGATATAACAAAGAAAGCATGCTTTCTGAGGAGA...CCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTGAGTTGCACTCACACTaGCAACTCTTCAGGGATTAT +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLELHSH*QLFRDY
Trigger: ATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTC...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCGAGTTGCACTCACACTaGCAACTCTTCAGGGATTAT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIELHSH*QLFRDY
Trigger: ATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTC...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCGAGTTGCACTCACACTaGCAACTCTTCAGGGATTAT +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIELHSH*QLFRDY
Trigger: ATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTC...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTTTCATGTTCATTTCTaGCTTGTCAAAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGFHVHF*LVKGSP
Trigger: TGGACTGCCTTTGACAAGGCAGAAATGAACATGAAA...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATATTTCATGTTCATTTCTaGCTTGTCAAAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QKHDRQGLLRVAISILRIFHVHF*LVKGSP
Trigger: TGGACTGCCTTTGACAAGGCAGAAATGAACATGAAA...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCAGGAGAGATTCCAAGTaGATGTTATGGGACAGAGTG +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIRRDSK*MLWDRV
Trigger: CACTCTGTCCCATAACATGCACTTGGAATCTCTCCT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGGTGCTTGGGGACCATTaGTTTGGGTGCATGAATATG +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMVLGDH*FGCMNM
Trigger: CATATTCATGCACCCAAAGCAATGGTCCCCAAGCAC...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACGTGCTTATAATCATTTaGGGTCCAACATTCACATTT +
Preference number: 4 (lower is better)
Translates to: QKINELHSHCQLFRDYPHVLIII*GPTFTF
Trigger: AAATGTGAATGTTGGACCCCAAATGATTATAAGCAC...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486111.5
ENST00000489671.6
CDS-3UTR CCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCCAAGCATAACCCTTaGTTTACACTTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFISKHNP*FTLDWG
Trigger: ACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGA...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCCATCTACTGCTCTGTTaGCCAGACTTTCATTCACAC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIHLLLC*PDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATG...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCATCTACTGCTCTGTTaGCCAGACTTTCATTCACAC +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRHLLLC*PDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATG...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTTTCTCAGAGACGTTTTaGTTAAGGGACTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLFSETF*LRDYFL
Trigger: CAGGAAGTAGTCCCTTAACCAAAACGTCTCTGAGAA...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCAATCCAAACGTGATCTaGGGAATTTTCCGTTATGAT +
Preference number: 4 (lower is better)
Translates to: HKNPTSQKINELHSHCQLNPNVI*GIFRYD
Trigger: ATCATAACGGAAAATTCCCCAGATCACGTTTGGATT...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTAGGCAGCCAGTGCATATaGTTAGTGGGTGGTTCCATT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLGSQCI*LVGGSI
Trigger: AATGGAACCACCCACTAACCATATGCACTGGCTGCC...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCATGGGCAAGTCAGATGTaGTGGTTGCATTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISWASQM*WLHFPL
Trigger: AAGAGGAAAATGCAACCACCACATCTGACTTGCCCA...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTTCTGCTATGTGTGTCTaGGTAACCATTGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPSAMCV*VTIAGA
Trigger: TGCACCAGCAATGGTTACTCAGACACACATAGCAGA...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCGTTGTACCTTTTCGTTaGACTTTCTCACACACTTTC +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAVVPFR*TFSHTF
Trigger: GAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAAC...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCGGTTATTTGAATTGGTaGACTCTGACACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIGYLNW*TLTPAH
Trigger: ATGAGCTGGTGTCAGAGTTCACCAATTCAAATAACC...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCGGTTATTTGAATTGGTaGACTCTGACACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIGYLNW*TLTPAH
Trigger: ATGAGCTGGTGTCAGAGTTCACCAATTCAAATAACC...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTTCAGAAGTAGTCCCTaGTTTAACCAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIFRSSP*FNQEGP
Trigger: AGGACCTTCTTGGTTAAATCAGGGACTACTTCTGAA...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCATGAGCATCACATATTaGAACGTAGGCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVMSITY*NVGFLL
Trigger: CAAGAGAAAGCCTACGTTTCAATATGTGATGCTCAT...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCATAATTACATGGGTGTaGGGAACACAAAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIIITWV*GTQKSH
Trigger: GTGGGATTTTTGTGTTCCTCACACCCATGTAATTAT...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GAGATCATACAATTACTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATAAATTGCACACTGGGTaGGATCATACAATTACTGCA +
Preference number: 4 (lower is better)
Translates to: EIIQLLQGTVGKQFGHRNKLHTG*DHTITA
Trigger: TGCAGTAATTGTATGATCTCACCCAGTGTGCAATTT...ATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAGTAATTGTATGATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTAAGCACGACAAGGGATaGGTTTTTAAATCCAAACGT +
Preference number: 4 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLKHDKG*VFKSKR
Trigger: ACGTTTGGATTTAAAAACTCATCCCTTGTCGTGCTT...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGAGTGACGTTTTAGTATaGAAATCCTGGCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMSDVLV*KSWPQC
Trigger: ACACTGGGGCCAGGATTTTCATACTAAAACGTCACT...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTCGTTCTATCCGCCTCTaGTTCTCTATCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPRSIRL*FSISRF
Trigger: GAATCTGGAGATAGAGAAGCAGAGGCGGATAGAACG...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACGTTCTATCCGCCTCTaGTTCTCTATCTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLRSIRL*FSISRF
Trigger: GAATCTGGAGATAGAGAAGCAGAGGCGGATAGAACG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTAAGCATGCCTCTCACTaGAGTACCAACAACATTCTA +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLKHASH*STNNIL
Trigger: TAGAATGTTGTTGGTACTGCAGTGAGAGGCATGCTT...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000495310.5
CDS-3UTR GCA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTATTAGTTTTCATCAGTaGTTGGGGACCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLISFHQ*LGTIAL
Trigger: CAAAGCAATGGTCCCCAAGCACTGATGAAAACTAAT...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCATTCAAATGGCATGGTaGAGGCTCCTGATACATAGT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIIQMAW*RLLIHS
Trigger: ACTATGTATCAGGAGCCTGCACCATGCCATTTGAAT...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACTGAGTAACCATTGCTaGTGCAGGGGTATATGGACT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLLSNHC*CRGIWT
Trigger: AGTCCATATACCCCTGCACCAGCAATGGTTACTCAG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCATTGATGATTATGAATaGCAGCTGAATGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: HKNPTSQKINELHSHCQLIDDYE*QLNGRV
Trigger: AACTCTACCATTCAGCTGCCATTCATAATCATCAAT...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGGTAAGGTGGCACCAGTaGTCAGGTCTAAATTTGAAA +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRVRWHQ*SGLNLK
Trigger: TTTCAAATTTAGACCTGACCACTGGTGCCACCTTAC...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTCCAAGCATAACCCTTaGTTTACACTTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMSKHNP*FTLDWG
Trigger: ACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGA...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTTTTGCTTCGTTTACTaGTCTAAGGAAGCATGCCTC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIFCFVY*SKEACL
Trigger: GAGGCATGCTTCCTTAGACCAGTAAACGAAGCAAAA...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477292.5
CDS-3UTR CCA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCAATGCTATTCTATTTTaGCTTCCAGAAGTAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGNAILF*LPEVAL
Trigger: TAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATT...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGCTATTTCAGACTTGTTaGGCAGGGACAGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMLFQTC*AGTAHF
Trigger: AAAATGGGCTGTCCCTGCCCAACAAGTCTGAAATAG...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp ATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTaGTTATATCATCTACTGCTCTGTTGGCCAGACTTT +
Preference number: 4 (lower is better)
Translates to: IIPTISSESMLS*LYHLLLCWPDF
Trigger: AAAGTCTGGCCAACAGAGCAGTAGATGATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCGTTGGACTGAGATTCTaGTCTATAAATCCTCTTACT +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAVGLRF*SINPLT
Trigger: AGTAAGAGGATTTATAGATCAGAATCTCAGTCCAAC...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCCTCACACACTTTCATTaGAAAGTGTCTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIILTHFH*KVSQAF
Trigger: AAAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAG...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCTCACACACTTTCATTaGAAAGTGTCTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFILTHFH*KVSQAF
Trigger: AAAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCAGATGCTGCAATCTATaGCTGTTTTTCTGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISARCCNL*LFFCLY
Trigger: ATACAAGCAGAAAAACAGTCATAGATTGCAGCATCT...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCTGTGGAGATATCTGTaGTATAACCTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFILWRYL*YNLLKP
Trigger: AGGCTTTAGAAGGTTATATCACAGATATCTCCACAG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATTGGAAATGCAACAAATaGAATGTTGCCTGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNWKCNK*NVAWSK
Trigger: CTTAGACCAGGCAACATTTCATTTGTTGCATTTCCA...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486111.5
ENST00000495310.5
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCATGAGCATCACATATTaGAACGTAGGCTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIMSITY*NVGFLL
Trigger: CAAGAGAAAGCCTACGTTTCAATATGTGATGCTCAT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCATAATTACATGGGTGTaGGGAACACAAAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIIITWV*GTQKSH
Trigger: GTGGGATTTTTGTGTTCCTCACACCCATGTAATTAT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCAATATTGGATTAGTTTaGAATGCAATTGACCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQGLSPLSPQKACFLCYINIGLV*NAIDPR
Trigger: CCTGGGGTCAATTGCATTTCAAACTAATCCAATATT...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCAATATTGGATTAGTTTaGAATGCAATTGACCCCAGG +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVNIGLV*NAIDPR
Trigger: CCTGGGGTCAATTGCATTTCAAACTAATCCAATATT...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGGGACAAATCCACATaGTTCAGGTCAAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMWDKST*FRSKFW
Trigger: CCAAAACTTTGACCTGAATCATGTGGATTTGTCCCA...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAAAACAGACTCCAAAATaGAGGCTTGAAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISKQTPK*RLETGT
Trigger: TGTTCCAGTTTCAAGCCTTCATTTTGGAGTCTGTTT...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCTTTTTGAAAGCGATTTaGTGTAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVFLKAI*CRRSSC
Trigger: GCAAGAACTTCTCCTACAGCAAATCGCTTTCAAAAA...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTTTTGAAAGCGATTTaGTGTAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VGQTFIHTMLTFISIISAFLKAI*CRRSSC
Trigger: GCAAGAACTTCTCCTACAGCAAATCGCTTTCAAAAA...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCACTCATCAATCAATCTaGACGTGTTCCATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIITHQSI*TCSICD
Trigger: ATCACAGATGGAACACGTGCAGATTGATTGATGAGT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGATTAGTTTTCATCAGTaGTTGGGGACCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRISFHQ*LGTIAL
Trigger: CAAAGCAATGGTCCCCAAGCACTGATGAAAACTAAT...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAATGGGTCTTTGGGAAATaGATATTAGTTTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: EHKNPTSQKINELHSHCQWVFGK*ILVFIS
Trigger: ACTGATGAAAACTAATATGCATTTCCCAAAGACCCA...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACATCTACTGCTCTGTTaGCCAGACTTTCATTCACAC +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLHLLLC*PDFHSH
Trigger: GTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTAAAGGACAGTTTGGTTTaGAGGGAAATCCCAATCCGT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLKDSLV*REIPIR
Trigger: ACGGATTGGGATTTCCCTCCAAACCAAACTGTCCTT...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCAGATGCTGCAATCTATaGCTGTTTTTCTGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIRCCNL*LFFCLY
Trigger: ATACAAGCAGAAAAACAGTCATAGATTGCAGCATCT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp TACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCAGATGCTGCAATCTATaGCTGTTTTTCTGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: YCSVGQTFIHTMLTFISIRCCNL*LFFCLY
Trigger: ATACAAGCAGAAAAACAGTCATAGATTGCAGCATCT...GATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTAGATGCTGCAATCTATaGCTGTTTTTCTGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: AHGNAILFWLPEVALVNSRCCNL*LFFCLY
Trigger: ATACAAGCAGAAAAACAGTCATAGATTGCAGCATCT...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATAGATGCTGCAATCTATaGCTGTTTTTCTGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNRCCNL*LFFCLY
Trigger: ATACAAGCAGAAAAACAGTCATAGATTGCAGCATCT...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTTTCAGAAGTAGTCCCTaGTTTAACCAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPFRSSP*FNQEGP
Trigger: AGGACCTTCTTGGTTAAATCAGGGACTACTTCTGAA...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGAAATTGCACACTGGGTaGGATCATACAATTACTGCA +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMKLHTG*DHTITA
Trigger: TGCAGTAATTGTATGATCTCACCCAGTGTGCAATTT...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTAAACTGCCTCTATCTCTaGGTCTGTACTATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLNCLYL*VCTMAY
Trigger: ATAAGCCATAGTACAGACTCAGAGATAGAGGCAGTT...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTTTTTTGAAAGCGATTTaGTGTAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: AHGNAILFWLPEVALVNSFLKAI*CRRSSC
Trigger: GCAAGAACTTCTCCTACAGCAAATCGCTTTCAAAAA...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCTGTTATATCATCTACTaGTCTGTTGGCCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFCYIIY*SVGQTF
Trigger: GAAAGTCTGGCCAACAGAGCAGTAGATGATATAACA...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTTTCATTTTCACAAATTaGACACTGGGTGAGATCATA +
Preference number: 4 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLFIFTN*TLGEII
Trigger: TATGATCTCACCCAGTGTGCAATTTGTGAAAATGAA...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACAAAGCCAGCCCATATaGAGAATACAGATGATCTCT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLQSQPI*RIQMIS
Trigger: AGAGATCATCTGTATTCTGCATATGGGCTGGCTTTG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp GAGATCATACAATTACTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATGTGCTTATAATCATTTaGGGTCCAACATTCACATTT +
Preference number: 4 (lower is better)
Translates to: EIIQLLQGTVGKQFGHRNVLIII*GPTFTF
Trigger: AAATGTGAATGTTGGACCCCAAATGATTATAAGCAC...ATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAGTAATTGTATGATCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486111.5
ENST00000489671.6
CDS-3UTR CCA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTATTGATGATTATGAATaGCAGCTGAATGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSIDDYE*QLNGRV
Trigger: AACTCTACCATTCAGCTGCCATTCATAATCATCAAT...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTGTAAGGTGGCACCAGTaGTCAGGTCTAAATTTGAAA +
Preference number: 4 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPVRWHQ*SGLNLK
Trigger: TTTCAAATTTAGACCTGACCACTGGTGCCACCTTAC...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTAATGCTATTCTATTTTaGCTTCCAGAAGTAGCCCTA +
Preference number: 4 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLNAILF*LPEVAL
Trigger: TAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATT...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATGTGACAATCTTCTCTTaGTTTACAGAAATTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNVTIFS*FTEIAG
Trigger: ACCAGCAATTTCTGTAAACCAAGAGAAGATTGTCAC...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTACATGTTTGGCTTGAGTaGAAATTTAATCAAACACTG +
Preference number: 4 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLHVWLE*KFNQTL
Trigger: CAGTGTTTGATTAAATTTCCACTCAAGCCAAACATG...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR TCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACTCACACACTTTCATTaGAAAGTGTCTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLLTHFH*KVSQAF
Trigger: AAAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTAGTTGTACCTTTTCGTTaGACTTTCTCACACACTTTC +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLVVPFR*TFSHTF
Trigger: GAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAAC...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR TCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTTCTCTAGTTTTCACTaGACACACAGTGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMFSSFH*THSANK
Trigger: TTTGTTTGCACTGTGTGTTCAGTGAAAACTAGAGAA...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTTTTTGAAAGCGATTTaGTGTAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMFLKAI*CRRSSC
Trigger: GCAAGAACTTCTCCTACAGCAAATCGCTTTCAAAAA...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR GCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCTCCTCAGAAAGCATaGTTTCTTTGTTATATCATC +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFISPQKA*FLCYII
Trigger: GATGATATAACAAAGAAAGCATGCTTTCTGAGGAGA...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR GCA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGTCTCCTCAGAAAGCATaGTTTCTTTGTTATATCATC +
Preference number: 4 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRSPQKA*FLCYII
Trigger: GATGATATAACAAAGAAAGCATGCTTTCTGAGGAGA...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCATTGATGATTATGAATaGCAGCTGAATGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIIDDYE*QLNGRV
Trigger: AACTCTACCATTCAGCTGCCATTCATAATCATCAAT...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATTGATGATTATGAATaGCAGCTGAATGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISIDDYE*QLNGRV
Trigger: AACTCTACCATTCAGCTGCCATTCATAATCATCAAT...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CCA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCAATGCTATTCTATTTTaGCTTCCAGAAGTAGCCCTA +
Preference number: 4 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFNAILF*LPEVAL
Trigger: TAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATT...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTCACAAATTGCACACTaGGTGAGATCATACAATTAC +
Preference number: 4 (lower is better)
Translates to: QTFIHTMLTFISIISAFMSQIAH*VRSYNY
Trigger: GTAATTGTATGATCTCACCCAGTGTGCAATTTGTGA...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTAGTGACAATCTTCTCTTaGTTTACAGAAATTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLVTIFS*FTEIAG
Trigger: ACCAGCAATTTCTGTAAACCAAGAGAAGATTGTCAC...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
3UTR CAA 72 bp CATCAGGTTTTTCTCTTCTTAGTAACCATGTTTGGCTaGAGTGGAAATTTAATCAAACACTGTTATCAACTG +
Preference number: 4 (lower is better)
Translates to: HQVFLFLVTMFG*SGNLIKHCYQL
Trigger: CAGTTGATAACAGTGTTTGATTAAATTTCCACTCAAGCCAAACATGGTTACTAAGAAGAGAAAAACCTGATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CCA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACATAGTGTGGGTCTTTaGGAAATGCATATTAGTTTT +
Preference number: 4 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLHSVGL*EMHISF
Trigger: AAAACTAATATGCATTTCCCAAAGACCCACACTATG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS GCA 90 bp GCGGCGGCCGGGTCCCGGTGGACTCACACCCGGGGAGACGCGGCCTaGCCGGTCAAGGCCCAGGAGTTTGAGGCCCCAGAACGCCAACCG +
Preference number: 5 (lower is better)
Translates to: AAAGSRWTHTRGDAA*PVKAQEFEAPERQP
Trigger: CGGTTGGCGTTCTGGGGCCTCAAACTCCTGGGCCTTGACCGGGCAGGCCGCGTCTCCCCGGGTGTGAGTCCACCGGGACCCGGCCGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS TCA 90 bp TCACACCCGGGGAGACGCGGCCTGCCCGGTCAAGGCCCAGGAGTTTaGGGCCCCAGAACGCCAACCGTGCGCGCGCCCTCGAGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SHPGRRGLPGQGPGV*GPRTPTVRAPSSLP
Trigger: GGGCAGGCTCGAGGGCGCGCGCACGGTTGGCGTTCTGGGGCCTCAAACTCCTGGGCCTTGACCGGGCAGGCCGCGTCTCCCCGGGTGTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS GCA 90 bp GAGTTTGAGGCCCCAGAACGCCAACCGTGCGCGCGCCCTCGAGCCTaGCCAAAGATGAAGGGTCAGGGCGCGCCCCGCGGGCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: EFEAPERQPCARPRA*PKMKGQGAPRGPGS
Trigger: GCTGCCCGGCCCGCGGGGCGCGCCCTGACCCTTCATCTTTGGGCAGGCTCGAGGGCGCGCGCACGGTTGGCGTTCTGGGGCCTCAAACTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS GCA 90 bp CAGCGCCGCAGCCGAGATCGCTACCGATTTCGTCCGCCCTCTCCCTaGCCAGCTACAGCCCCGCTTCCCCCGCGCGAGCTTTGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: QRRSRDRYRFRPPSP*PATAPLPPRELWRR
Trigger: CCGCCGCCAAAGCTCGCGCGGGGGAAGCGGGGCTGTAGCTGGGCAGGGAGAGGGCGGACGAAATCGGTAGCGATCTCGGCTGCGGCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000489671.6
ENST00000491667.1
ENST00000495095.6
CDS GCA 90 bp TGCCCAAAGATGAAGGGTCAGGGCGCGCCCCGCGGGCCGGGCAGCTaGGGCAGCGCCGCAGCCGAGATCGCTACCGATTTCGTCCGCCCT +
Preference number: 5 (lower is better)
Translates to: CPKMKGQGAPRGPGS*GSAAAEIATDFVRP
Trigger: AGGGCGGACGAAATCGGTAGCGATCTCGGCTGCGGCGCTGCCGCAGCTGCCCGGCCCGCGGGGCGCGCCCTGACCCTTCATCTTTGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000489671.6
ENST00000491667.1
ENST00000495095.6
CDS GCA 90 bp TGCCCGGTCAAGGCCCAGGAGTTTGAGGCCCCAGAACGCCAACCGTaGGCGCGCCCTCGAGCCTGCCCAAAGATGAAGGGTCAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: CPVKAQEFEAPERQP*ARPRACPKMKGQGA
Trigger: CGCGCCCTGACCCTTCATCTTTGGGCAGGCTCGAGGGCGCGCGCACGGTTGGCGTTCTGGGGCCTCAAACTCCTGGGCCTTGACCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS-3UTR CAA 90 bp GAACGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTGCTTCCTCCAGAGAGCATTaGCCTGACTCCAGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: ERTGGLASGLGAVRGRTASSREH*PDSRPN
Trigger: GTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGA...AGCAGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS CCA 90 bp GCAATTCCACTTCTAGGTATTTACCGCCTTCGGCTGCAGAAGAACTaGCGGCCAAGCGAGGCTGTCGGGCCGAGCCAGGAGCGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: AIPLLGIYRLRLQKN*RPSEAVGPSQERVF
Trigger: GAAGACGCGCTCCTGGCTCGGCCCGACAGCCTCGCTTGGCCGCCAGTTCTTCTGCAGCCGAAGGCGGTAAATACCTAGAAGTGGAATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464782.5
CDS-3UTR CAA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAATGGAGGACCGCCATGTaGGTCGCTCCTTTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: TCCHLPSVPDWSERCAPEWRTAM*VAPFPP
Trigger: GGGCGGGAAAGGAGCGACCAACATGGCGGTCCTCCA...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTCAGCATGGGGAGCCCTaGTCTGTGGAGGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PECSHLGSQCIWLVGGSIQHGEP*SVEVSA
Trigger: GGCTGAGACCTCCACAGACAAGGGCTCCCCATGCTG...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTCAGCATGGGGAGCCCTaGTCTGTGGAGGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RNSVLKRDPRSAATWAASQHGEP*SVEVSA
Trigger: GGCTGAGACCTCCACAGACAAGGGCTCCCCATGCTG...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GACAGCGTGGCCCTCACGGAGGGAAGAAGCTCTGGGTTTTGGTGCAGGCTCTGCCGGCGGGCCCTGGTTTaGCTGCTCATTTTGTCGATT +
Preference number: 5 (lower is better)
Translates to: DSVALTEGRSSGFWCRLCRRALV*LLILSI
Trigger: AATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCG...GCAGAGCCTGCACCAAAACCCAGAGCTTCTTCCCTCCGTGAGGGCCACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGCTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTTGCTAAGGCCACTTTGGACTGGTGACTGTTaGGGGCCAGGAACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: CWTGDCLGPGTAQLLRPLWTGDC*GPGTAQ
Trigger: CTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCA...AAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTTCCCACCTCAGCCTCTaGAGTAGCCAGGACTACAGG +
Preference number: 5 (lower is better)
Translates to: PECSHLGSQCIWLVGGSISHLSL*SSQDYR
Trigger: CCTGTAGTCCTGGCTACTCAAGAGGCTGAGGTGGGA...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGTGGAGGACCGCCATGTaGGTCGCTCCTTTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVWRTAM*VAPFPP
Trigger: GGGCGGGAAAGGAGCGACCAACATGGCGGTCCTCCA...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCTCCCCCGCGCGAGCTTaGGCGGCGGAGCAGCACAGT +
Preference number: 5 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLSPARA*AAEQHS
Trigger: ACTGTGCTGCTCCGCCGCCAAAGCTCGCGCGGGGGA...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR CAA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAATCCTCCAGAGAGCATTaGCCTGACTCCAGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: TCCHLPSVPDWSERCAPESSREH*PDSRPN
Trigger: GTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGA...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCGTTAGGGGAGGGAGCTaGATAGATATTAAAGGGCCC +
Preference number: 5 (lower is better)
Translates to: CASSPGRSDLCVASNPACVRGGS*IDIKGP
Trigger: GGGCCCTTTAATATCTATCAAGCTCCCTCCCCTAAC...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CCCCTCAGCTGTTTGGCACTTGGTGACACAGGACTGATGCTAATCCAAAACCCATGGACTGGTGACTGTTaGGGGCCAGGAACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: PLSCLALGDTGLMLIQNPWTGDC*GPGTAQ
Trigger: CTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCA...TGGGTTTTGGATTAGCATCAGTCCTGTGTCACCAAGTGCCAAACAGCTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGTCCCACCTCAGCCTCTaGAGTAGCCAGGACTACAGG +
Preference number: 5 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVSHLSL*SSQDYR
Trigger: CCTGTAGTCCTGGCTACTCAAGAGGCTGAGGTGGGA...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AGGGTGGGAGCGATGTTATCCCCGATCCTGAGACCTGCGGCGAAGGGGCGAGGCAATATGGGAACCCATTaGGGAAAACGGTTCTTAGAA +
Preference number: 5 (lower is better)
Translates to: RVGAMLSPILRPAAKGRGNMGTH*GKRFLE
Trigger: TTCTAAGAACCGTTTTCCCAAATGGGTTCCCATATT...GCCTCGCCCCTTCGCCGCAGGTCTCAGGATCGGGGATAACATCGCTCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGCTGGACTGGTGACTGTTTGGGGCCAGGAACTGCCCAGTTGCTAAGGCCACTTTCCTCATCTTCATCATaGAACGAACAGGGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: CWTGDCLGPGTAQLLRPLSSSSS*NEQGVS
Trigger: CGAGACCCCCTGTTCGTTCAATGATGAAGATGAGGA...AAGTGGCCTTAGCAACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTTCTATTTCAGACTTGTaGGGCAGGGACAGCCCATTT +
Preference number: 5 (lower is better)
Translates to: PECSHLGSQCIWLVGGSISISDL*GRDSPF
Trigger: AAATGGGCTGTCCCTGCCCAACAAGTCTGAAATAGA...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATTGAACGAACAGGGGGTCTCGCCTCGGGACTCGGAGCAGTGAGAGGCCGCACTAAATGGTTATTTGAATaGGTGAACTCTGACACCAGC +
Preference number: 5 (lower is better)
Translates to: IERTGGLASGLGAVRGRTKWLFE*VNSDTS
Trigger: GCTGGTGTCAGAGTTCACCAATTCAAATAACCATTT...AGTGCGGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCCCTGTTCGTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp GTTCTGGAGGTTGCTGAGAGGTCCAAAATGAAAGTGCCGGCAGATTCAGTGCCTCCAGGAACTGCCCAGTaGCTAAGGCCACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: VLEVAERSKMKVPADSVPPGTAQ*LRPLLH
Trigger: ATGCAGAAGTGGCCTTAGCAACTGGGCAGTTCCTGG...AGGCACTGAATCTGCCGGCACTTTCATTTTGGACCTCTCAGCAACCTCCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp AGGAACTCAGTACTGAAACGTGATCCCCGGAGTGCAGCCACCTGGGCAGCCAGTAACGTAGGCTTTCTCTaGTCTTTATTCTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: RNSVLKRDPRSAATWAASNVGFL*SLFWGG
Trigger: TCCTCCCCAGAATAAAGACAAGAGAAAGCCTACGTT...ACTGGCTGCCCAGGTGGCTGCACTCCGGGGATCACGTTTCAGTACTGAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CCGGAGTGCAGCCACCTGGGCAGCCAGTGCATATGGTTAGTGGGTGGTTCCATTAACGTAGGCTTTCTCTaGTCTTTATTCTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: PECSHLGSQCIWLVGGSINVGFL*SLFWGG
Trigger: TCCTCCCCAGAATAAAGACAAGAGAAAGCCTACGTT...AATGGAACCACCCACTAACCATATGCACTGGCTGCCCAGGTGGCTGCACTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGCCAAACTTGTGGCCATaGTCTGTAGTTTCTCGGGCG +
Preference number: 5 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVPNLWP*SVVSRA
Trigger: CGCCCGAGAAACTACAGACAATGGCCACAAGTTTGG...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGGTGAAATATTTCCATTaGAGGCCGGGTGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAVKYFH*RPGAVA
Trigger: AGCCACCGCACCCGGCCTCAAATGGAAATATTTCAC...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGTGCCAGCAGCCCTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCATGGGACAGAGTGGCTaGTTAAGAAAGTATAGAGAC +
Preference number: 5 (lower is better)
Translates to: CASSPGRSDLCVASNPACMGQSG*LRKYRD
Trigger: GTCTCTATACTTTCTTAACAAGCCACTCTGTCCCAT...GCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAGGGCTGCTGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS TCA 90 bp CACTCTTACCCAGGGACCCAGCCAGTAGCTTCTGCTATGTGTGTCTaGGTAACCATTGCTGGTGCAGGGGTATATGGACTCCCAATCAGA +
Preference number: 5 (lower is better)
Translates to: HSYPGTQPVASAMCV*VTIAGAGVYGLPIR
Trigger: TCTGATTGGGAGTCCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCAGAAGCTACTGGCTGGGTCCCTGGGTAAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471095.5
CDS-3UTR CAA 90 bp CTTCTGCATCCAAGCATAACCCTTGGTTTACACTTGACTGGGGTAAGGTGGCACCGGCGGGCCCTGGTTTaGCTGCTCATTTTGTCGATT +
Preference number: 5 (lower is better)
Translates to: LLHPSITLGLHLTGVRWHRRALV*LLILSI
Trigger: AATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCG...GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGATGCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp TTCAGATCCTCCAGAGAGCATTTGCCTGACTCCAGGCCAAACGACATTCCCATCACCCTTGGTTTACACTaGACTGGGGTAAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: FRSSREHLPDSRPNDIPITLGLH*TGVRWH
Trigger: GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGT...GATGGGAATGTCGTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAATCATCTACTGCTCTGTaGGCCAGACTTTCATTCACA +
Preference number: 5 (lower is better)
Translates to: TCCHLPSVPDWSERCAPESSTAL*ARLSFT
Trigger: TGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGA...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAACAGAAGATAAATGAGTaGCACTCACACTGCCAACTC +
Preference number: 5 (lower is better)
Translates to: TCCHLPSVPDWSERCAPEQKINE*HSHCQL
Trigger: GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCCAGGGTTTTGTCATGTaGCCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KAVQARKRNVRNTIVKDCQGFVM*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAACATGACAAAACCCTG...GCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCTGCAGTGGTGTGATCTaGGCTCTACAACCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: CTHTANSSGIIPTISSESCSGVI*ALQPPP
Trigger: AGGCGGAGGTTGTAGAGCCAAGATCACACCACTGCA...GCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGAGGTCTATTTCAGACTaGTTGGGCAGGGACAGCCCA +
Preference number: 5 (lower is better)
Translates to: LGGVICVWQVTQRATITKRSISD*LGRDSP
Trigger: TGGGCTGTCCCTGCCCAACAAGTCTGAAATAGACCT...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAACTTCTCAGAGACGTTTaGGTTAAGGGACTACTTCCT +
Preference number: 5 (lower is better)
Translates to: TCCHLPSVPDWSERCAPELLRDV*VKGLLP
Trigger: AGGAAGTAGTCCCTTAACCAAAACGTCTCTGAGAAG...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGGCTACCCCTCAGCTGTTaGGCACTTGGTGACACAGGA +
Preference number: 5 (lower is better)
Translates to: LGDHCFGCMNMGTHLGKRLPLSC*ALGDTG
Trigger: TCCTGTGTCACCAAGTGCCAAACAGCTGAGGGGTAG...CCGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGCACGATCTCAGCTCATaGCAACTTTTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LGGVICVWQVTQRATITKHDLSS*QLLPPG
Trigger: CCCAGGAGGCAAAAGTTGCAATGAGCTGAGATCGTG...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS CCA 90 bp TTCCCCCACTTGTGGAGGGCTAACCACAACTTCTCTGGATGTGAGTaGGCCATGCTGGCAACAAGCTTAACTTCAGGTTGTATTTGCTGC +
Preference number: 5 (lower is better)
Translates to: FPHLWRANHNFSGCE*AMLATSLTSGCICC
Trigger: GCAGCAAATACAACCTGAAGTTAAGCTTGTTGCCAGCATGGCCCACTCACATCCAGAGAAGTTGTGGTTAGCCCTCCACAAGTGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494656.3
CDS-3UTR CAA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATCAGAAGATAAATGAGTaGCACTCACACTGCCAACTC +
Preference number: 5 (lower is better)
Translates to: AFPKRSRYAAAFSTALINQKINE*HSHCQL
Trigger: GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGCCCTTAAAGGACAGTTaGGTTTGGAGGGAAATCCCA +
Preference number: 5 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTAPLKDS*VWREIP
Trigger: TGGGATTTCCCTCCAAACCAAACTGTCCTTTAAGGG...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GCCTTTCCCAAACGGTCCCGCTACGCTGCTGCTTTCTCCACAGCACTCATCAATACTCTGGCAAGAATGTaGCTACTTGGTGAAGGAATG +
Preference number: 5 (lower is better)
Translates to: AFPKRSRYAAAFSTALINTLARM*LLGEGM
Trigger: CATTCCTTCACCAAGTAGCAACATTCTTGCCAGAGT...ATTGATGAGTGCTGTGGAGAAAGCAGCAGCGTAGCGGGACCGTTTGGGAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGAAGAAGCTCTGGGTTTaGGTGCAGGCTCTGCCACAG +
Preference number: 5 (lower is better)
Translates to: ISALSKAVQARKRNVRNTKKLWV*VQALPQ
Trigger: CTGTGGCAGAGCCTGCACCAAAACCCAGAGCTTCTT...CGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AACCACAACTTCTCTGGATGTGAGTGGGCCATGCTGGCAACAAGCTTAACTTCAAGAAGGTTCCCCCACTaGTGGAGGGCTAACCACAAC +
Preference number: 5 (lower is better)
Translates to: NHNFSGCEWAMLATSLTSRRFPH*WRANHN
Trigger: GTTGTGGTTAGCCCTCCACAAGTGGGGGAACCTTCT...TGAAGTTAAGCTTGTTGCCAGCATGGCCCACTCACATCCAGAGAAGTTGTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494656.3
CDS-3UTR CAA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATACCCTTGGTTTACACTaGACTGGGGTAAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDTLGLH*TGVRWH
Trigger: GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGT...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGCCAGGAACTGCCCAGTaGCTAAGGCCACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: NPTSQKINELHSHCQLFRPGTAQ*LRPLLH
Trigger: ATGCAGAAGTGGCCTTAGCAACTGGGCAGTTCCTGG...CCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGGACTGGTGACTGTTaGGGGCCAGGAACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: CEEHKNPTSQKINELHSHWTGDC*GPGTAQ
Trigger: CTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCA...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTTCTGCATCCAAGCATAACCCTTGGTTTACACTTGACTGGGGTAAGGTGGCACGATGATGCCTTCTGGTaGCATCCATTTGGGGTCCAA +
Preference number: 5 (lower is better)
Translates to: LLHPSITLGLHLTGVRWHDDAFW*HPFGVQ
Trigger: TTGGACCCCAAATGGATGCAACCAGAAGGCATCATC...GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGATGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGGTCTATTTCAGACTaGTTGGGCAGGGACAGCCCA +
Preference number: 5 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLRSISD*LGRDSP
Trigger: TGGGCTGTCCCTGCCCAACAAGTCTGAAATAGACCT...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGAGTGCTTGGGGACCATaGCTTTGGGTGCATGAATAT +
Preference number: 5 (lower is better)
Translates to: LGGVICVWQVTQRATITKSAWGP*LWVHEY
Trigger: ATATTCATGCACCCAAAGCAATGGTCCCCAAGCACT...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCAGTGCTTGGGGACCATaGCTTTGGGTGCATGAATAT +
Preference number: 5 (lower is better)
Translates to: KAVQARKRNVRNTIVKDCSAWGP*LWVHEY
Trigger: ATATTCATGCACCCAAAGCAATGGTCCCCAAGCACT...GCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTCAAGGCCCAGGAGTTaGAGGCCCCAGAACGCCAAC +
Preference number: 5 (lower is better)
Translates to: VGQTFIHTMLTFISIISASRPRS*RPQNAN
Trigger: GTTGGCGTTCTGGGGCCTCAAACTCCTGGGCCTTGA...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR CAA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAATGTTGTACCTTTTCGTaGAACTTTCTCACACACTTT +
Preference number: 5 (lower is better)
Translates to: TCCHLPSVPDWSERCAPECCTFS*NFLTHF
Trigger: AAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACA...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ACCTGCTGTCACCTCCCCAGTGTTCCTGACTGGTCTGAGAGGTGTGCTCCAGAACTTCATTGTACGATGTaGTACCTTTTCGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: TCCHLPSVPDWSERCAPELHCTM*YLFVEL
Trigger: AAGTTCAACGAAAAGGTACAACATCGTACAATGAAG...TTCTGGAGCACACCTCTCAGACCAGTCAGGAACACTGGGGAGGTGACAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCCCAGGAACTGCCCAGTaGCTAAGGCCACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: HKNPTSQKINELHSHCQLPGTAQ*LRPLLH
Trigger: ATGCAGAAGTGGCCTTAGCAACTGGGCAGTTCCTGG...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCTGGACTGGTGACTGTTaGGGGCCAGGAACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIWTGDC*GPGTAQ
Trigger: CTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCA...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCAACGTAGGCTTTCTCTaGTCTTTATTCTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: KAVQARKRNVRNTIVKDCNVGFL*SLFWGG
Trigger: TCCTCCCCAGAATAAAGACAAGAGAAAGCCTACGTT...GCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AGGAGAAGTTCTTGCAGCTGGGCCCGCTTCTGCTTTATCCGTTCTATCCGCCTCGCAACAAATGAAATGTaGCCTTTTGTTGGACTGAGA +
Preference number: 5 (lower is better)
Translates to: RRSSCSWARFCFIRSIRLATNEM*PFVGLR
Trigger: TCTCAGTCCAACAAAAGGCAACATTTCATTTGTTGC...GAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAACTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACCCAAACTTGTGGCCATaGTCTGTAGTTTCTCGGGCG +
Preference number: 5 (lower is better)
Translates to: QKINELHSHCQLFRDYPHPNLWP*SVVSRA
Trigger: CGCCCGAGAAACTACAGACAATGGCCACAAGTTTGG...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCGTTAGGGGAGGGAGCTaGATAGATATTAAAGGGCCC +
Preference number: 5 (lower is better)
Translates to: QALACFPSLNEQGGSDVIVRGGS*IDIKGP
Trigger: GGGCCCTTTAATATCTATCAAGCTCCCTCCCCTAAC...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCACCCGGGAGGCAGAGGTaGCAGTGGCTGAGATCATGC +
Preference number: 5 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISPGRQR*QWLRSC
Trigger: GCATGATCTCAGCCACTGCAACCTCTGCCTCCCGGG...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTCCCGGGAGGCAGAGGTaGCAGTGGCTGAGATCATGC +
Preference number: 5 (lower is better)
Translates to: AHGNAILFWLPEVALVNSPGRQR*QWLRSC
Trigger: GCATGATCTCAGCCACTGCAACCTCTGCCTCCCGGG...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTAGGGGCAAGACAGCATaGACTTCAACAGGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGRGKTA*TSTGLF
Trigger: AAAAAGGCCTGTTGAAGTCAATGCTGTCTTGCCCCT...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAATCCTCCAGAGAGCATTaGCCTGACTCCAGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: EHKNPTSQKINELHSHCQSSREH*PDSRPN
Trigger: GTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGA...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AACCTTCTAAAGCCTTTGGCACCAGGGATTTCGCAAGTTTCAGATCCTCCAGAGAACCTTCTAAAGCCTTaGGCACCAGGGATTTCGCAA +
Preference number: 5 (lower is better)
Translates to: NLLKPLAPGISQVSDPPENLLKP*APGISQ
Trigger: TTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT...CTCTGGAGGATCTGAAACTTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTGGACTGGTGACTGTTaGGGGCCAGGAACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIWTGDC*GPGTAQ
Trigger: CTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCA...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTGGACTGGTGACTGTTaGGGGCCAGGAACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIWTGDC*GPGTAQ
Trigger: CTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCA...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp GTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCGTCAAGGACTGCTCCGTGGCATCTAGCATAATCTaGGGACAAATCCACATGATT +
Preference number: 5 (lower is better)
Translates to: VQARKRNVRNTIVKDCSVASSII*GQIHMI
Trigger: AATCATGTGGATTTGTCCCAAGATTATGCTAGATGC...CACGGAGCAGTCCTTGACGATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCTCTATTTCAGACTTGTaGGGCAGGGACAGCCCATTT +
Preference number: 5 (lower is better)
Translates to: QALACFPSLNEQGGSDVISISDL*GRDSPF
Trigger: AAATGGGCTGTCCCTGCCCAACAAGTCTGAAATAGA...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCGGGCAGGGAGGCACATaGCTGAGGGTCATTCAAATG +
Preference number: 5 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGGQGGT*LRVIQM
Trigger: CATTTGAATGACCCTCAGCAATGTGCCTCCCTGCCC...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATCAGAGGGTCAAAGTGTaGTGCCCACTCACTTTTTCT +
Preference number: 5 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDQRVKV*CPLTFS
Trigger: AGAAAAAGTGAGTGGGCACAACACTTTGACCCTCTG...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCAGGGGCAAGACAGCATaGACTTCAACAGGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: QALACFPSLNEQGGSDVIRGKTA*TSTGLF
Trigger: AAAAAGGCCTGTTGAAGTCAATGCTGTCTTGCCCCT...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATAGCTCATTGCAACTTTaGCCTCCTGGGTTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDSSLQL*PPGFKR
Trigger: TCTCTTGAACCCAGGAGGCAAAAGTTGCAATGAGCT...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCCACGATCTCAGCTCATaGCAACTTTTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: HKNPTSQKINELHSHCQLHDLSS*QLLPPG
Trigger: CCCAGGAGGCAAAAGTTGCAATGAGCTGAGATCGTG...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS CCA 90 bp CTTCAGGTTGTATTTGCTGCTAAGCAGACAAGCAGGCAGCCAGTCTaGTCTCTCTCTCTTCCCACAAATACAAATGCCAGTATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: LQVVFAAKQTSRQPV*SLSLPTNTNASMRK
Trigger: TTTCCTCATACTGGCATTTGTATTTGTGGGAAGAGAGAGAGACCAGACTGGCTGCCTGCTTGTCTGCTTAGCAGCAAATACAACCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494656.3
CDS-3UTR CAA 90 bp GACACAGGACTGATGCTAATCCAAAACCCATCTGGGAGGACTGTGGTGACAGCGCTTCATTGTACGATGTaGTACCTTTTCGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: DTGLMLIQNPSGRTVVTALHCTM*YLFVEL
Trigger: AAGTTCAACGAAAAGGTACAACATCGTACAATGAAG...CGCTGTCACCACAGTCCTCCCAGATGGGTTTTGGATTAGCATCAGTCCTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTTCTGCATCCAAGCATAACCCTTGGTTTACACTTGACTGGGGTAAGGTGGCACGTTTTGCTGCTCATTTaGTCGATTTCTCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: LLHPSITLGLHLTGVRWHVLLLI*SISLYQ
Trigger: CTGGTACAGAGAAATCGACAAAATGAGCAGCAAAAC...GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGATGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTACGGCGGGCCCTGGTTTaGCTGCTCATTTTGTCGATT +
Preference number: 5 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLRRALV*LLILSI
Trigger: AATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCG...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCCAGGAACTGCCCAGTaGCTAAGGCCACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSPGTAQ*LRPLLH
Trigger: ATGCAGAAGTGGCCTTAGCAACTGGGCAGTTCCTGG...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp GAGATCATACAATTACTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATCCAGGAACTGCCCAGTaGCTAAGGCCACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: EIIQLLQGTVGKQFGHRNPGTAQ*LRPLLH
Trigger: ATGCAGAAGTGGCCTTAGCAACTGGGCAGTTCCTGG...ATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAGTAATTGTATGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACAAAGGACAGTTTGGTTaGGAGGGAAATCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: QKINELHSHCQLFRDYPHKGQFG*EGNPNP
Trigger: CGGATTGGGATTTCCCTCCAAACCAAACTGTCCTTT...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTTGCAGTGGTGTGATCTaGGCTCTACAACCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSCSGVI*ALQPPP
Trigger: AGGCGGAGGTTGTAGAGCCAAGATCACACCACTGCA...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCCTGATAGGAGCTACCTaGTTTTCAAGGACTGACTCT +
Preference number: 5 (lower is better)
Translates to: QALACFPSLNEQGGSDVILIGAT*FSRTDS
Trigger: AGAGTCAGTCCTTGAAAACAAGGTAGCTCCTATCAG...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAAGTGAAATATTTCCATTaGAGGCCGGGTGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: EHKNPTSQKINELHSHCQVKYFH*RPGAVA
Trigger: AGCCACCGCACCCGGCCTCAAATGGAAATATTTCAC...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGCTACCCCTCAGCTGTTaGGCACTTGGTGACACAGGA +
Preference number: 5 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELLPLSC*ALGDTG
Trigger: TCCTGTGTCACCAAGTGCCAAACAGCTGAGGGGTAG...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACGAACAACCTAGTGGTTaGGGCTCATGGCCCTTTACC +
Preference number: 5 (lower is better)
Translates to: CEEHKNPTSQKINELHSHEQPSG*GSWPFT
Trigger: GGTAAAGGGCCATGAGCCCAAACCACTAGGTTGTTC...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTGGGAGGAGTGATCTGTGTGTGGCAAGTAACCCAGCGTGCCACTATAACAAAGTCTCTCTTGTTTAAATaGCTTAAAGCATGTGGCACC +
Preference number: 5 (lower is better)
Translates to: LGGVICVWQVTQRATITKSLLFK*LKACGT
Trigger: GGTGCCACATGCTTTAAGCAATTTAAACAAGAGAGA...CTTTGTTATAGTGGCACGCTGGGTTACTTGCCACACACAGATCACTCCTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCAAAGGAAAGTCTACATaGGGCAAGTCAGATGTGGTG +
Preference number: 5 (lower is better)
Translates to: QALACFPSLNEQGGSDVIKGKST*GKSDVV
Trigger: CACCACATCTGACTTGCCCAATGTAGACTTTCCTTT...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TTTTCTAGCCCGTTTTCTATCACCAGGGACCCAGCCAGTAGCTTCTGCTATGTGTCATCAGCGACTTCATaGTACGATGTTGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: FSSPFSITRDPASSFCYVSSATS*YDVVPF
Trigger: AAAAGGTACAACATCGTACAATGAAGTCGCTGATGA...CACATAGCAGAAGCTACTGGCTGGGTCCCTGGTGATAGAAAACGGGCTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCGGCGGGCCCTGGTTTaGCTGCTCATTTTGTCGATT +
Preference number: 5 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLRRALV*LLILSI
Trigger: AATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCG...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCGGCGGGCCCTGGTTTaGCTGCTCATTTTGTCGATT +
Preference number: 5 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIRRALV*LLILSI
Trigger: AATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCACGGCGGGCCCTGGTTTaGCTGCTCATTTTGTCGATT +
Preference number: 5 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISRRALV*LLILSI
Trigger: AATCGACAAAATGAGCAGCAAAACCAGGGCCCGCCG...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCCTCCAGAGAGCATTaGCCTGACTCCAGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFISSREH*PDSRPN
Trigger: GTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGA...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATTCCTCCAGAGAGCATTaGCCTGACTCCAGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNSSREH*PDSRPN
Trigger: GTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGA...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTTCCTCCAGAGAGCATTaGCCTGACTCCAGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLSSREH*PDSRPN
Trigger: GTTTGGCCTGGAGTCAGGCAAATGCTCTCTGGAGGA...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTAACCCTTGGTTTACACTaGACTGGGGTAAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLTLGLH*TGVRWH
Trigger: GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGT...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTACCCTTGGTTTACACTaGACTGGGGTAAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLTLGLH*TGVRWH
Trigger: GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGT...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCCAGGAACTGCCCAGTaGCTAAGGCCACTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRPGTAQ*LRPLLH
Trigger: ATGCAGAAGTGGCCTTAGCAACTGGGCAGTTCCTGG...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATATCCTCATCTTCATCATaGAACGAACAGGGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: QKHDRQGLLRVAISILRISSSSS*NEQGVS
Trigger: CGAGACCCCCTGTTCGTTCAATGATGAAGATGAGGA...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CACTTGACTGGGGTAAGGTGGCACCAGTGGTCAGGTCTAAATTTGAAACTGATTTCTGGTTGCATCCATTaGGGGTCCAACATTCACATT +
Preference number: 5 (lower is better)
Translates to: HLTGVRWHQWSGLNLKLISGCIH*GSNIHI
Trigger: AATGTGAATGTTGGACCCCAAATGGATGCAACCAGA...AATCAGTTTCAAATTTAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp TTGCTGAGGGTCATTCAAATGGCATGGTGCAGGCTCCTGATACATAGTGTGGGTAAATGCTATTCTATTTaGGCTTCCAGAAGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: LLRVIQMAWCRLLIHSVGKCYSI*ASRSSP
Trigger: AGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTT...ACCCACACTATGTATCAGGAGCCTGCACCATGCCATTTGAATGACCCTCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGACTCTGGCAAGAATGTaGCTACTTGGTGAAGGAATG +
Preference number: 5 (lower is better)
Translates to: NPTSQKINELHSHCQLFRTLARM*LLGEGM
Trigger: CATTCCTTCACCAAGTAGCAACATTCTTGCCAGAGT...CCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCCCTCCAAGGCCCACCTaGATCATAAGGCACAAGGTA +
Preference number: 5 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVPPRPT*IIRHKV
Trigger: TACCTTGTGCCTTATGATCAAGGTGGGCCTTGGAGG...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GCTTGGGGACCATTGCTTTGGGTGCATGAATATGGGAACCCATTTGGGAAAACGCTTGGTTTACAGAAATaGCTGGTAGCTAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: AWGPLLWVHEYGNPFGKTLGLQK*LVANFA
Trigger: AGCAAAGTTAGCTACCAGCAATTTCTGTAAACCAAG...CGTTTTCCCAAATGGGTTCCCATATTCATGCACCCAAAGCAATGGTCCCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAGGGCAGGGAGGCACATaGCTGAGGGTCATTCAAATG +
Preference number: 5 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISGQGGT*LRVIQM
Trigger: CATTTGAATGACCCTCAGCAATGTGCCTCCCTGCCC...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCAAGAAGCTCTGGGTTTaGGTGCAGGCTCTGCCACAG +
Preference number: 5 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIKKLWV*VQALPQ
Trigger: CTGTGGCAGAGCCTGCACCAAAACCCAGAGCTTCTT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTGTGTGGAAGGACCAGTaGGTCACTGAACTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSVWKDQ*VTELLG
Trigger: CCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACAC...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCAGTCAGATGTGGTGGTaGCATTTTCCTCTTATCTCT +
Preference number: 5 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLSQMWW*HFPLIS
Trigger: AGAGATAAGAGGAAAATGCAACCACCACATCTGACT...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGAAAGGAAAGTCTACATaGGGCAAGTCAGATGTGGTG +
Preference number: 5 (lower is better)
Translates to: NPTSQKINELHSHCQLFRKGKST*GKSDVV
Trigger: CACCACATCTGACTTGCCCAATGTAGACTTTCCTTT...CCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AACCACAACTTCTCTGGATGTGAGTGGGCCATGCTGGCAACAAGCTTAACTTCAGTTTACATGAGCTTCTaGTATGCACGCTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: NHNFSGCEWAMLATSLTSVYMSF*YARLFS
Trigger: GGAAAACAAGCGTGCATACAAGAAGCTCATGTAAAC...TGAAGTTAAGCTTGTTGCCAGCATGGCCCACTCACATCCAGAGAAGTTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494656.3
CDS-3UTR CAA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATTCTCACACACTTTCATaGAAAAGTGTCTCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDSHTLS*KSVSSL
Trigger: AAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAGA...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TTTTCTAGCCCGTTTTCTATCACCAGGGACCCAGCCAGTAGCTTCTGCTATGTGCTTCATTGTACGATGTaGTACCTTTTCGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: FSSPFSITRDPASSFCYVLHCTM*YLFVEL
Trigger: AAGTTCAACGAAAAGGTACAACATCGTACAATGAAG...CACATAGCAGAAGCTACTGGCTGGGTCCCTGGTGATAGAAAACGGGCTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp ATTTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGTCATCAGCGACTTCATaGTACGATGTTGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: ISALSKAVQARKRNVRNTSSATS*YDVVPF
Trigger: AAAAGGTACAACATCGTACAATGAAGTCGCTGATGA...CGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GGGGTATATGGACTCCCAATCAGAACACTTCCTGAACTGGTTAGTCTCTGTGGTAAAAGATACTCAAACTaGTCACTGGAGATGCTGCAA +
Preference number: 5 (lower is better)
Translates to: GVYGLPIRTLPELVSLCGKRYSN*SLEMLQ
Trigger: TTGCAGCATCTCCAGTGACAAGTTTGAGTATCTTTT...ACCACAGAGACTAACCAGTTCAGGAAGTGTTCTGATTGGGAGTCCATATACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAAAACCTTCTAAAGCCTTaGGCACCAGGGATTTCGCAA +
Preference number: 5 (lower is better)
Translates to: EHKNPTSQKINELHSHCQNLLKP*APGISQ
Trigger: TTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCACCCTTGGTTTACACTaGACTGGGGTAAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFITLGLH*TGVRWH
Trigger: GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGT...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACGCAACAAATGAAATGTaGCCTGGTCTAAGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: QKINELHSHCQLFRDYPHATNEM*PGLRKH
Trigger: ATGCTTCCTTAGACCAGGCAACATTTCATTTGTTGC...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486111.5
CDS-3UTR CAA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCATGTTCATTTCTGCCTaGTCAAAGGCAGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGMFISA*SKAVQA
Trigger: TGCCTGGACTGCCTTTGACAAGGCAGAAATGAACAT...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCGCATCTAGCATAATCTaGGGACAAATCCACATGATT +
Preference number: 5 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLASSII*GQIHMI
Trigger: AATCATGTGGATTTGTCCCAAGATTATGCTAGATGC...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TCAGCTACGTTGGCCTCCAATGCAGCTATAAGCAGTGAAGACCAAAGTCTAACCCAAGAATGTTGCTACTaGGTGAAGGAATGGTTATCA +
Preference number: 5 (lower is better)
Translates to: SATLASNAAISSEDQSLTQECCY*VKEWLS
Trigger: TGATAACCATTCCTTCACCAAGTAGCAACATTCTTG...GGTTAGACTTTGGTCTTCACTGCTTATAGCTGCATTGGAGGCCAACGTAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CAAGCTCTTGCTTGTTTCCCATCTCTAAATGAGCAGGGTGGGAGCGATGTTATCCAAGAATGTTGCTACTaGGTGAAGGAATGGTTATCA +
Preference number: 5 (lower is better)
Translates to: QALACFPSLNEQGGSDVIQECCY*VKEWLS
Trigger: TGATAACCATTCCTTCACCAAGTAGCAACATTCTTG...GATAACATCGCTCCCACCCTGCTCATTTAGAGATGGGAAACAAGCAAGAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTCAGGGTTTTGTCATGTaGCCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: AHGNAILFWLPEVALVNSQGFVM*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAACATGACAAAACCCTG...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCCCTCCAAGGCCCACCTaGATCATAAGGCACAAGGTA +
Preference number: 5 (lower is better)
Translates to: YCSVGQTFIHTMLTFISIPPRPT*IIRHKV
Trigger: TACCTTGTGCCTTATGATCAAGGTGGGCCTTGGAGG...GATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATGTGTGGAAGGACCAGTaGGTCACTGAACTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNVWKDQ*VTELLG
Trigger: CCCAAGAAGTTCAGTGACCAACTGGTCCTTCCACAC...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCAGCTCATTGCAACTTTaGCCTCCTGGGTTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGSSLQL*PPGFKR
Trigger: TCTCTTGAACCCAGGAGGCAAAAGTTGCAATGAGCT...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGGAACAACCTAGTGGTTaGGGCTCATGGCCCTTTACC +
Preference number: 5 (lower is better)
Translates to: KTRAHTTNTHEHHILKRREQPSG*GSWPFT
Trigger: GGTAAAGGGCCATGAGCCCAAACCACTAGGTTGTTC...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS GCA 90 bp GCAACAAATGAAATGTTGCCTGGTCTAAGGAAGCATGCCTCTCACTaGAGTACCAACAACATTCTACAGTCTTTGTTACCATTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: ATNEMLPGLRKHASH*STNNILQSLLPFSG
Trigger: TCCACTGAATGGTAACAAAGACTGTAGAATGTTGTTGGTACTGCAGTGAGAGGCATGCTTCCTTAGACCAGGCAACATTTCATTTGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486111.5
CDS-3UTR CAA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTCTCACACACTTTCATaGAAAAGTGTCTCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: QKINELHSHCQLFRDYPHSHTLS*KSVSSL
Trigger: AAGGCTTGAGACACTTTTCAATGAAAGTGTGTGAGA...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACTATCTCCTCTGTTGTACCTTTTCGTaGAACTTTCTCACACACTTT +
Preference number: 5 (lower is better)
Translates to: NELHSHCQLFRDYPHYLLCCTFS*NFLTHF
Trigger: AAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACA...GAGGAGATAGTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GGGGTATATGGACTCCCAATCAGAACACTTCCTGAACTGGTTAGTCTCTGTGGTTGTTGTACCTTTTCGTaGAACTTTCTCACACACTTT +
Preference number: 5 (lower is better)
Translates to: GVYGLPIRTLPELVSLCGCCTFS*NFLTHF
Trigger: AAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACA...ACCACAGAGACTAACCAGTTCAGGAAGTGTTCTGATTGGGAGTCCATATACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS-3UTR CAA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCGTTTTGCTGCTCATTTaGTCGATTTCTCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: HKNPTSQKINELHSHCQLVLLLI*SISLYQ
Trigger: CTGGTACAGAGAAATCGACAAAATGAGCAGCAAAAC...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACAAAAGATACTCAAACTaGTCACTGGAGATGCTGCAA +
Preference number: 5 (lower is better)
Translates to: QKINELHSHCQLFRDYPHKRYSN*SLEMLQ
Trigger: TTGCAGCATCTCCAGTGACAAGTTTGAGTATCTTTT...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGAACCTTCTAAAGCCTTaGGCACCAGGGATTTCGCAA +
Preference number: 5 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELNLLKP*APGISQ
Trigger: TTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTAACCTTCTAAAGCCTTaGGCACCAGGGATTTCGCAA +
Preference number: 5 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLNLLKP*APGISQ
Trigger: TTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCCTCATCTTCATCATaGAACGAACAGGGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFISSSSS*NEQGVS
Trigger: CGAGACCCCCTGTTCGTTCAATGATGAAGATGAGGA...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCATCCTCATCTTCATCATaGAACGAACAGGGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISSSSSS*NEQGVS
Trigger: CGAGACCCCCTGTTCGTTCAATGATGAAGATGAGGA...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTTCAGGGATTATCCCCACCATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: QKINELHSHCQLFRDYPHHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...GTGGGGATAATCCCTGAAGAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGTGAGGAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACCAGAAGATAAATGAGTaGCACTCACACTGCCAACTC +
Preference number: 5 (lower is better)
Translates to: CEEHKNPTSQKINELHSHQKINE*HSHCQL
Trigger: GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG...GTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTCCTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TTCTGCCTTGTCAAAGGCAGTCCAGGCAAGGAAGAGAAACGTCAGAAACACGATAACATTCTACAGTCTTaGTTACCATTCAGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: FCLVKGSPGKEEKRQKHDNILQS*LPFSGN
Trigger: GTTTCCACTGAATGGTAACAAAGACTGTAGAATGTT...ATCGTGTTTCTGACGTTTCTCTTCCTTGCCTGGACTGCCTTTGACAAGGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486111.5
CDS-3UTR CAA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTATGTTCATTTCTGCCTaGTCAAAGGCAGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSMFISA*SKAVQA
Trigger: TGCCTGGACTGCCTTTGACAAGGCAGAAATGAACAT...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCAGTTTTCATCAGTGCTaGGGGACCATTGCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: LQGLSPLSPQKACFLCYISFHQC*GTIALG
Trigger: ACCCAAAGCAATGGTCCCCAAGCACTGATGAAAACT...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS CCA 90 bp CTCTCTTCCCACAAATACAAATGCCAGTATGAGGAAAACCTGTTCTaGGGCATACTAAAATTCTTAAACCAGCTGAAGCAGGCAGTTGTT +
Preference number: 5 (lower is better)
Translates to: LSSHKYKCQYEENLF*GILKFLNQLKQAVV
Trigger: AACAACTGCCTGCTTCAGCTGGTTTAAGAATTTTAGTATGCCCCAGAACAGGTTTTCCTCATACTGGCATTTGTATTTGTGGGAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494656.3
CDS-3UTR CAA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCGTTTTGCTGCTCATTTaGTCGATTTCTCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGVLLLI*SISLYQ
Trigger: CTGGTACAGAGAAATCGACAAAATGAGCAGCAAAAC...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAAGTTTTGCTGCTCATTTaGTCGATTTCTCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: EHKNPTSQKINELHSHCQVLLLI*SISLYQ
Trigger: CTGGTACAGAGAAATCGACAAAATGAGCAGCAAAAC...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTAACCTTCTAAAGCCTTaGGCACCAGGGATTTCGCAA +
Preference number: 5 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLNLLKP*APGISQ
Trigger: TTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp GCACATGGAAATGCTATTCTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTAACCTTCTAAAGCCTTaGGCACCAGGGATTTCGCAA +
Preference number: 5 (lower is better)
Translates to: AHGNAILFWLPEVALVNSNLLKP*APGISQ
Trigger: TTGCGAAATCCCTGGTGCCAAAGGCTTTAGAAGGTT...AGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTTCCATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTAACCCTTGGTTTACACTaGACTGGGGTAAGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLTLGLH*TGVRWH
Trigger: GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGT...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCTCCTCATCTTCATCATaGAACGAACAGGGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFSSSSS*NEQGVS
Trigger: CGAGACCCCCTGTTCGTTCAATGATGAAGATGAGGA...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CTGCAGGGAACTGTAGGCAAGCAATTTGGTCATAGGAATTTGTTTCTTTGTCTTTCATCTACTGCTCTGTaGGCCAGACTTTCATTCACA +
Preference number: 5 (lower is better)
Translates to: LQGTVGKQFGHRNLFLCLSSTAL*ARLSFT
Trigger: TGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGA...AAGACAAAGAAACAAATTCCTATGACCAAATTGCTTGCCTACAGTTCCCTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCCTGATAGGAGCTACCTaGTTTTCAAGGACTGACTCT +
Preference number: 5 (lower is better)
Translates to: VGQTFIHTMLTFISIISALIGAT*FSRTDS
Trigger: AGAGTCAGTCCTTGAAAACAAGGTAGCTCCTATCAG...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCATGGGACAGAGTGGCTaGTTAAGAAAGTATAGAGAC +
Preference number: 5 (lower is better)
Translates to: LFWLPEVALVNSMHQCIGMGQSG*LRKYRD
Trigger: GTCTCTATACTTTCTTAACAAGCCACTCTGTCCCAT...GCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCTTATCAACTGGGAATTaGAGGGCAGGGAGGCACATT +
Preference number: 5 (lower is better)
Translates to: YCSVGQTFIHTMLTFISILSTGN*RAGRHI
Trigger: AATGTGCCTCCCTGCCCTCAAATTCCCAGTTGATAA...GATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTTTATCAACTGGGAATTaGAGGGCAGGGAGGCACATT +
Preference number: 5 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLLSTGN*RAGRHI
Trigger: AATGTGCCTCCCTGCCCTCAAATTCCCAGTTGATAA...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCAGAGGGTCAAAGTGTaGTGCCCACTCACTTTTTCT +
Preference number: 5 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIQRVKV*CPLTFS
Trigger: AGAAAAAGTGAGTGGGCACAACACTTTGACCCTCTG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS TCA 90 bp CAAAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTaGAACGTAGGCTTTCTCTTGTCTTTATTCTGGGGAGGAGGAATC +
Preference number: 5 (lower is better)
Translates to: QKQELTLQTHMSITY*NVGFLLSLFWGGGI
Trigger: GATTCCTCCTCCCCAGAATAAAGACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACTCTGTGCTTATAATCATTaGGGGTCCAACATTCACATT +
Preference number: 5 (lower is better)
Translates to: HKNPTSQKINELHSHCQLCAYNH*GSNIHI
Trigger: AATGTGAATGTTGGACCCCAAATGATTATAAGCACA...GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486111.5
ENST00000489671.6
CDS-3UTR CAA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATAAAATGGTTATTTGAATaGGTGAACTCTGACACCAGC +
Preference number: 5 (lower is better)
Translates to: QKHDRQGLLRVAISILRIKWLFE*VNSDTS
Trigger: GCTGGTGTCAGAGTTCACCAATTCAAATAACCATTT...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTAGTTTTGCTGCTCATTTaGTCGATTTCTCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLVLLLI*SISLYQ
Trigger: CTGGTACAGAGAAATCGACAAAATGAGCAGCAAAAC...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTATCCTCATCTTCATCATaGAACGAACAGGGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLSSSSS*NEQGVS
Trigger: CGAGACCCCCTGTTCGTTCAATGATGAAGATGAGGA...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTAACGTAGGCTTTCTCTaGTCTTTATTCTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLNVGFL*SLFWGG
Trigger: TCCTCCCCAGAATAAAGACAAGAGAAAGCCTACGTT...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTGCAACAAATGAAATGTaGCCTGGTCTAAGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSATNEM*PGLRKH
Trigger: ATGCTTCCTTAGACCAGGCAACATTTCATTTGTTGC...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486111.5
ENST00000495310.5
CDS-3UTR CAA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAACATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: EHKNPTSQKINELHSHCQHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTTCATCTACTGCTCTGTaGGCCAGACTTTCATTCACA +
Preference number: 5 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLSSTAL*ARLSFT
Trigger: TGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGA...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCAGAAGATAAATGAGTaGCACTCACACTGCCAACTC +
Preference number: 5 (lower is better)
Translates to: WPDFHSHYVNFHLNHLSLQKINE*HSHCQL
Trigger: GAGTTGGCAGTGTGAGTGCAACTCATTTATCTTCTG...AAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATGTTCATTTCTGCCTaGTCAAAGGCAGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFMFISA*SKAVQA
Trigger: TGCCTGGACTGCCTTTGACAAGGCAGAAATGAACAT...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GAACACAAAAATCCCACCTCACAGAAGATAAATGAGTTGCACTCACACTGCCAAAAATGCTATTCTATTTaGGCTTCCAGAAGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: EHKNPTSQKINELHSHCQKCYSI*ASRSSP
Trigger: AGGGCTACTTCTGGAAGCCAAAATAGAATAGCATTT...TTGGCAGTGTGAGTGCAACTCATTTATCTTCTGTGAGGTGGGATTTTTGTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCAAAGGACAGTTTGGTTaGGAGGGAAATCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFKGQFG*EGNPNP
Trigger: CGGATTGGGATTTCCCTCCAAACCAAACTGTCCTTT...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCCCCTTAAAGGACAGTTaGGTTTGGAGGGAAATCCCA +
Preference number: 5 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFPLKDS*VWREIP
Trigger: TGGGATTTCCCTCCAAACCAAACTGTCCTTTAAGGG...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTAAGTCACATTTATACTaGGAGCAACTCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: RAHTTNTHEHHILKRRLSKSHLY*EQLCCL
Trigger: GAGACAGCAGAGTTGCTCCAAGTATAAATGTGACTT...AGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CAGAAACACGATCGTCAAGGACTGCTCCGTGTAGCAATCTCAATTCTAAGAATAAATATGGGAACCCATTaGGGAAAACGGTTCTTAGAA +
Preference number: 5 (lower is better)
Translates to: QKHDRQGLLRVAISILRINMGTH*GKRFLE
Trigger: TTCTAAGAACCGTTTTCCCAAATGGGTTCCCATATT...TATTCTTAGAATTGAGATTGCTACACGGAGCAGTCCTTGACGATCGTGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTAAGTCAGATGTGGTGGTaGCATTTTCCTCTTATCTCT +
Preference number: 5 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLSQMWW*HFPLIS
Trigger: AGAGATAAGAGGAAAATGCAACCACCACATCTGACT...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp TCATTTTCACAAATTGCACACTGGGTGAGATCATACAATTACTGCAGGGAACTGTCATCAGCGACTTCATaGTACGATGTTGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: SFSQIAHWVRSYNYCRELSSATS*YDVVPF
Trigger: AAAAGGTACAACATCGTACAATGAAGTCGCTGATGA...CAGTTCCCTGCAGTAATTGTATGATCTCACCCAGTGTGCAATTTGTGAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCAAATGGTTATTTGAATaGGTGAACTCTGACACCAGC +
Preference number: 5 (lower is better)
Translates to: VGQTFIHTMLTFISIISAKWLFE*VNSDTS
Trigger: GCTGGTGTCAGAGTTCACCAATTCAAATAACCATTT...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCGTTTTGCTGCTCATTTaGTCGATTTCTCTGTACCAG +
Preference number: 5 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIVLLLI*SISLYQ
Trigger: CTGGTACAGAGAAATCGACAAAATGAGCAGCAAAAC...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp GTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCAAAAGATACTCAAACTaGTCACTGGAGATGCTGCAA +
Preference number: 5 (lower is better)
Translates to: VGQTFIHTMLTFISIISAKRYSN*SLEMLQ
Trigger: TTGCAGCATCTCCAGTGACAAGTTTGAGTATCTTTT...GGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGAACGTAGGCTTTCTCTaGTCTTTATTCTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: QTFIHTMLTFISIISAFMNVGFL*SLFWGG
Trigger: TCCTCCCCAGAATAAAGACAAGAGAAAGCCTACGTT...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCGCAACAAATGAAATGTaGCCTTTTGTTGGACTGAGA +
Preference number: 5 (lower is better)
Translates to: LQGLSPLSPQKACFLCYIATNEM*PFVGLR
Trigger: TCTCAGTCCAACAAAAGGCAACATTTCATTTGTTGC...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489671.6
CDS-3UTR CAA 90 bp ATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAAAGTCACATTTATACTaGGAGCAACTCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: IYCSVGQTFIHTMLTFISKSHLY*EQLCCL
Trigger: GAGACAGCAGAGTTGCTCCAAGTATAAATGTGACTT...TGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTTCAGGGATTATCCCCACTATCTCCTCAGAAAGCATGCTTTCTTTGTTATATCCTTGGTTTACAGAAATaGCTGGTAGCTAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: LQGLSPLSPQKACFLCYILGLQK*LVANFA
Trigger: AGCAAAGTTAGCTACCAGCAATTTCTGTAAACCAAG...GATATAACAAAGAAAGCATGCTTTCTGAGGAGATAGTGGGGATAATCCCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATTTTGGCTTCCAGAAGTAGCCCTAGTAAATTCTATGCACCAATGCATTGGCTATGTTGTACCTTTTCGTaGAACTTTCTCACACACTTT +
Preference number: 5 (lower is better)
Translates to: ILASRSSPSKFYAPMHWLCCTFS*NFLTHF
Trigger: AAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACA...TAGCCAATGCATTGGTGCATAGAATTTACTAGGGCTACTTCTGGAAGCCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCTTTCTCTTGTCCTTCATTGTACGATGTaGTACCTTTTCGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: HTTNTHEHHILKRRLSLVLHCTM*YLFVEL
Trigger: AAGTTCAACGAAAAGGTACAACATCGTACAATGAAG...GACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATTCATCAGCGACTTCATaGTACGATGTTGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNSSATS*YDVVPF
Trigger: AAAAGGTACAACATCGTACAATGAAGTCGCTGATGA...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCATCAGCGACTTCATaGTACGATGTTGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: CSVGQTFIHTMLTFISIISSATS*YDVVPF
Trigger: AAAAGGTACAACATCGTACAATGAAGTCGCTGATGA...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCAAATGGTTATTTGAATaGGTGAACTCTGACACCAGC +
Preference number: 5 (lower is better)
Translates to: YCSVGQTFIHTMLTFISIKWLFE*VNSDTS
Trigger: GCTGGTGTCAGAGTTCACCAATTCAAATAACCATTT...GATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCAAATGGTTATTTGAATaGGTGAACTCTGACACCAGC +
Preference number: 5 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIKWLFE*VNSDTS
Trigger: GCTGGTGTCAGAGTTCACCAATTCAAATAACCATTT...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCAAAAGATACTCAAACTaGTCACTGGAGATGCTGCAA +
Preference number: 5 (lower is better)
Translates to: CSVGQTFIHTMLTFISIIKRYSN*SLEMLQ
Trigger: TTGCAGCATCTCCAGTGACAAGTTTGAGTATCTTTT...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGAAAAGATACTCAAACTaGTCACTGGAGATGCTGCAA +
Preference number: 5 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRKRYSN*SLEMLQ
Trigger: TTGCAGCATCTCCAGTGACAAGTTTGAGTATCTTTT...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCCATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFIHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp AAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATTGAAACGTAGGCATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: KTRAHTTNTHEHHILKRRHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...CCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATGAGCATCACATATaGAAACGTAGGCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNHEHHI*KRRLSL
Trigger: AAGAGAAAGCCTACGTTTCAATATGTGATGCTCATG...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTCTTCTCAGAGACGTTTaGGTTAAGGGACTACTTCCT +
Preference number: 5 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPLLRDV*VKGLLP
Trigger: AGGAAGTAGTCCCTTAACCAAAACGTCTCTGAGAAG...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp ATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCTCTCTTGTTTAAATaGCTTAAAGCATGTGGCACC +
Preference number: 5 (lower is better)
Translates to: IIYCSVGQTFIHTMLTFISLLFK*LKACGT
Trigger: GGTGCCACATGCTTTAAGCAATTTAAACAAGAGAGA...GATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp CTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATTGTTGTACCTTTTCGTaGAACTTTCTCACACACTTT +
Preference number: 5 (lower is better)
Translates to: LLLCWPDFHSHYVNFHLNCCTFS*NFLTHF
Trigger: AAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACA...ATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTGTTGTACCTTTTCGTaGAACTTTCTCACACACTTT +
Preference number: 5 (lower is better)
Translates to: CSVGQTFIHTMLTFISIICCTFS*NFLTHF
Trigger: AAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACA...GATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGAAATGGTTATTTGAATaGGTGAACTCTGACACCAGC +
Preference number: 5 (lower is better)
Translates to: QTFIHTMLTFISIISAFMKWLFE*VNSDTS
Trigger: GCTGGTGTCAGAGTTCACCAATTCAAATAACCATTT...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp TATATCATCTACTGCTCTGTTGGCCAGACTTTCATTCACACTATGTTAACTTTCCGTTTTCTATCACATTaGGGGTCCAACATTCACATT +
Preference number: 5 (lower is better)
Translates to: YIIYCSVGQTFIHTMLTFRFLSH*GSNIHI
Trigger: AATGTGAATGTTGGACCCCAAATGTGATAGAAAACG...GAAAGTTAACATAGTGTGAATGAAAGTCTGGCCAACAGAGCAGTAGATGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495310.5
CDS TCA 90 bp AGCAATTCCACTTCTAGGTATTTACCTTTTGTTGGACTGAGATTCTaGTCTATAAATCCTCTTACTTCTGCATTTGTGGAAGTCAAACCA +
Preference number: 5 (lower is better)
Translates to: SNSTSRYLPFVGLRF*SINPLTSAFVEVKP
Trigger: TGGTTTGACTTCCACAAATGCAGAAGTAAGAGGATTTATAGATCAGAATCTCAGTCCAACAAAAGGTAAATACCTAGAAGTGGAATTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467072.5
CDS-3UTR CAA 90 bp CAGACTTTCATTCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGCTTCATTGTACGATGTaGTACCTTTTCGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: QTFIHTMLTFISIISAFMLHCTM*YLFVEL
Trigger: AAGTTCAACGAAAAGGTACAACATCGTACAATGAAG...CATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGAATGAAAGTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS-3UTR CAA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTTCATCAGCGACTTCATaGTACGATGTTGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPSSATS*YDVVPF
Trigger: AAAAGGTACAACATCGTACAATGAAGTCGCTGATGA...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp AATCTCAATTCTAAGAATAATTACATGGGTGTGAGGAACACAAAAATCCCACCTAAAAGATACTCAAACTaGTCACTGGAGATGCTGCAA +
Preference number: 5 (lower is better)
Translates to: NLNSKNNYMGVRNTKIPPKRYSN*SLEMLQ
Trigger: TTGCAGCATCTCCAGTGACAAGTTTGAGTATCTTTT...AGGTGGGATTTTTGTGTTCCTCACACCCATGTAATTATTCTTAGAATTGAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000499676.5
CDS-3UTR CAA 90 bp GTTGGATTCAAGTTTTCAATATATAGAGTTTACATGAGCTTCTTGTATGCACGCAAGCTTAACTTCAGGTaGTATTTGCTGCTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: VGFKFSIYRVYMSFLYARKLNFR*YLLLSR
Trigger: TCTGCTTAGCAGCAAATACAACCTGAAGTTAAGCTT...GCGTGCATACAAGAAGCTCATGTAAACTCTATATATTGAAAACTTGAATCCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494656.3
CDS-3UTR CAA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTATGTGCTTATAATCATTaGGGGTCCAACATTCACATT +
Preference number: 5 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLCAYNH*GSNIHI
Trigger: AATGTGAATGTTGGACCCCAAATGATTATAAGCACA...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486111.5
ENST00000489671.6
CDS-3UTR CAA 90 bp TCACACTATGTTAACTTTCATCTCAATCATCTCAGCCTTCATGTGATTTGCTTACTTCATTGTACGATGTaGTACCTTTTCGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: SHYVNFHLNHLSLHVICLLHCTM*YLFVEL
Trigger: AAGTTCAACGAAAAGGTACAACATCGTACAATGAAG...TAAGCAAATCACATGAAGGCTGAGATGATTGAGATGAAAGTTAACATAGTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS CCA 72 bp GAGCCAGGAGCGCGTCTTCGGGCGCCGCCGCTTCTGTaGCGCCCGCGCTTAGGCGGCGGCCGGGTCCCGGTG +
Preference number: 6 (lower is better)
Translates to: EPGARLRAPPLL*RPRLGGGRVPV
Trigger: CACCGGGACCCGGCCGCCGCCTAAGCGCGGGCGCCACAGAAGCGGCGGCGCCCGAAGACGCGCTCCTGGCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS TCA 72 bp GCCAACCGTGCGCGCGCCCTCGAGCCTGCCCAAAGATaGAGGGTCAGGGCGCGCCCCGCGGGCCGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: ANRARALEPAQR*RVRARPAGRAA
Trigger: AGCTGCCCGGCCCGCGGGGCGCGCCCTGACCCTTCATCTTTGGGCAGGCTCGAGGGCGCGCGCACGGTTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS GCA 72 bp GCCCCAGAACGCCAACCGTGCGCGCGCCCTCGAGCCTaGCCAAAGATGAAGGGTCAGGGCGCGCCCCGCGGG +
Preference number: 6 (lower is better)
Translates to: APERQPCARPRA*PKMKGQGAPRG
Trigger: CCCGCGGGGCGCGCCCTGACCCTTCATCTTTGGGCAGGCTCGAGGGCGCGCGCACGGTTGGCGTTCTGGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS TCA 72 bp GGGAGACGCGGCCTGCCCGGTCAAGGCCCAGGAGTTTaGGGCCCCAGAACGCCAACCGTGCGCGCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: GRRGLPGQGPGV*GPRTPTVRAPS
Trigger: CGAGGGCGCGCGCACGGTTGGCGTTCTGGGGCCTCAAACTCCTGGGCCTTGACCGGGCAGGCCGCGTCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS CAA 72 bp GGGGAGACGCGGCCTGCCCGGTCAAGGCCCAGGAGTTaGAGGCCCCAGAACGCCAACCGTGCGCGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: GETRPARSRPRS*RPQNANRARAL
Trigger: GAGGGCGCGCGCACGGTTGGCGTTCTGGGGCCTCAAACTCCTGGGCCTTGACCGGGCAGGCCGCGTCTCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS CAA 90 bp CTCACACCCGGGGAGACGCGGCCTGCCCGGTCAAGGCCCAGGAGTTaGAGGCCCCAGAACGCCAACCGTGCGCGCGCCCTCGAGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LTPGETRPARSRPRS*RPQNANRARALEPA
Trigger: GGCAGGCTCGAGGGCGCGCGCACGGTTGGCGTTCTGGGGCCTCAAACTCCTGGGCCTTGACCGGGCAGGCCGCGTCTCCCCGGGTGTGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS GCA 72 bp GGGTCCCGGTGGACTCACACCCGGGGAGACGCGGCCTaGCCGGTCAAGGCCCAGGAGTTTGAGGCCCCAGAA +
Preference number: 6 (lower is better)
Translates to: GSRWTHTRGDAA*PVKAQEFEAPE
Trigger: TTCTGGGGCCTCAAACTCCTGGGCCTTGACCGGGCAGGCCGCGTCTCCCCGGGTGTGAGTCCACCGGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS GCA 72 bp AGCCGAGATCGCTACCGATTTCGTCCGCCCTCTCCCTaGCCAGCTACAGCCCCGCTTCCCCCGCGCGAGCTT +
Preference number: 6 (lower is better)
Translates to: SRDRYRFRPPSP*PATAPLPPREL
Trigger: AAGCTCGCGCGGGGGAAGCGGGGCTGTAGCTGGGCAGGGAGAGGGCGGACGAAATCGGTAGCGATCTCGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000489671.6
ENST00000491667.1
ENST00000495095.6
CDS GCA 72 bp AAGGCCCAGGAGTTTGAGGCCCCAGAACGCCAACCGTaGGCGCGCCCTCGAGCCTGCCCAAAGATGAAGGGT +
Preference number: 6 (lower is better)
Translates to: KAQEFEAPERQP*ARPRACPKMKG
Trigger: ACCCTTCATCTTTGGGCAGGCTCGAGGGCGCGCGCACGGTTGGCGTTCTGGGGCCTCAAACTCCTGGGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000464782.5
ENST00000467072.5
ENST00000475734.5
ENST00000476617.5
ENST00000489671.6
ENST00000491667.1
ENST00000494358.5
ENST00000495095.6
CDS TCA 72 bp CAGTGCCTGGTGAGGGTTTATTCTCTGCTTCAAAGATaGTGCCTTCTGGTTGCATCCATTTGGGGTCCAACA +
Preference number: 6 (lower is better)
Translates to: QCLVRVYSLLQR*CLLVASIWGPT
Trigger: TGTTGGACCCCAAATGGATGCAACCAGAAGGCATCATCTTTGAAGCAGAGAATAAACCCTCACCAGGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487734.5
CDS TCA 72 bp GAGCTCACACTACAAACACACATGAGCATCACATATTaGAACGTAGGCTTTCTCTTGTCTTTATTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: ELTLQTHMSITY*NVGFLLSLFWG
Trigger: TCCCCAGAATAAAGACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS CAA 72 bp AGAGCTCACACTACAAACACACATGAGCATCACATATaGAAACGTAGGCTTTCTCTTGTCTTTATTCTGGGG +
Preference number: 6 (lower is better)
Translates to: RAHTTNTHEHHI*KRRLSLVFILG
Trigger: CCCCAGAATAAAGACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS CAA 90 bp TCAAAAACAAGAGCTCACACTACAAACACACATGAGCATCACATATaGAAACGTAGGCTTTCTCTTGTCTTTATTCTGGGGAGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: SKTRAHTTNTHEHHI*KRRLSLVFILGRRN
Trigger: ATTCCTCCTCCCCAGAATAAAGACAAGAGAAAGCCTACGTTTCAATATGTGATGCTCATGTGTGTTTGTAGTGTGAGCTCTTGTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000477292.5
ENST00000486111.5
ENST00000489671.6
ENST00000495310.5
ENST00000499676.5
CDS TCA 72 bp ACTAAGACTTACCATCTGCTTGCTCAAACTCACATATaGCAGAATCACCAATGCAGTATTCCACCATGTAAA +
Preference number: 6 (lower is better)
Translates to: TKTYHLLAQTHI*QNHQCSIPPCK
Trigger: TTTACATGGTGGAATACTGCATTGGTGATTCTGTCATATGTGAGTTTGAGCAAGCAGATGGTAAGTCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471095.5