RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEX55 (Homo sapiens)

Ensembl gene IDs: ENSG00000163424

Ensembl transcript IDs: ENST00000295622.6, ENST00000460150.1, ENST00000473121.1, ENST00000492792.1, ENST00000494105.2

Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CAA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTATCATTTCCTGCACTTaGTTCTATACACTTTGCTGT +
Preference number: 3 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIIISCT*FYTLCC
Trigger: ACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGAT...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAAGTGTGGCCAGCACTTaGGGGAGCGGCTGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVSVAST*GSGWAF
Trigger: GAAAGCCCAGCCGCTCCCTCAAGTGCTGGCCACACT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR TCA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTAGTGTGGCCAGCACTTaGGGGAGCGGCTGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LFFIISCTLFYTLCCMCASVAST*GSGWAF
Trigger: GAAAGCCCAGCCGCTCCCTCAAGTGCTGGCCACACT...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTACAGGGTTGGATGCTCTaGGGCCAGCCTGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVQGWML*GQPDQV
Trigger: CACCTGGTCAGGCTGGCCGCAGAGCATCCAACCCTG...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGCTCTGCGGCCAGCCTaGCCAGGTGTACTATGCCCA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYALRPA*PGVLCP
Trigger: TGGGCATAGTACACCTGGTCAGGCTGGCCGCAGAGC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAATCAGCAGGGTTGGATaGTCTGCGGCCAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVISRVG*SAASLT
Trigger: GGTCAGGCTGGCCGCAGAGCATCCAACCCTGCTGAT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCCTGGCCCTTAGTGTaGCCAGCACTTGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVSWPLV*PALEGA
Trigger: CGCTCCCTCAAGTGCTGGCCACACTAAGGGCCAGGA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTCCTGGCCCTTAGTGTaGCCAGCACTTGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCSWPLV*PALEGA
Trigger: CGCTCCCTCAAGTGCTGGCCACACTAAGGGCCAGGA...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTATCAGCAGGGTTGGATaGTCTGCGGCCAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIISRVG*SAASLT
Trigger: GGTCAGGCTGGCCGCAGAGCATCCAACCCTGCTGAT...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGGCTCTTCCATTTCCTaGCGCGTCCCTGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYGSSIS*RVPDWS
Trigger: AGACCAGTCAGGGACGCGGCAGGAAATGGAAGAGCC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTGGCTCTTCCATTTCCTaGCGCGTCCCTGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIGSSIS*RVPDWS
Trigger: AGACCAGTCAGGGACGCGGCAGGAAATGGAAGAGCC...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCCTCGCCAGACATTCTaGGGTCCATCTGCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYPRQTF*GPSARK
Trigger: CTTCCGAGCAGATGGACCGCAGAATGTCTGGCGAGG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTCCTCGCCAGACATTCTaGGGTCCATCTGCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIPRQTF*GPSARK
Trigger: CTTCCGAGCAGATGGACCGCAGAATGTCTGGCGAGG...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTGGTCGTCTTCTTCCTaGCCCTTAGTGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCWSSSS*PLVWPA
Trigger: TGCTGGCCACACTAAGGGCCAGGAAGAAGACGACCA...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTCGGCCTGGTTCTTCTaGTCGTCTTCTTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYSAWFF*SSSSWP
Trigger: GGGCCAGGAAGAAGACGACCAGAAGAACCAGGCCGA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGCTCTTCTCTCAGACTaGCCTGCCATTCTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVALLSD*PAILWS
Trigger: CGACCACAGAATGGCAGGCCAGTCTGAGAGAAGAGC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGTCAGGCCAGACACCTaGCCATCACTCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYVRPDT*PSLCSC
Trigger: GCATGAACAGAGTGATGGTCAGGTGTCTGGCCTGAC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR TCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTGTCAGGCCAGACACCTaGCCATCACTCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIVRPDT*PSLCSC
Trigger: GCATGAACAGAGTGATGGTCAGGTGTCTGGCCTGAC...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTCTCTCAGACTGGCCTaGCATTCTGTGGTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYSLRLA*HSVVGL
Trigger: CAGACCGACCACAGAATGGCAGGCCAGTCTGAGAGA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTTCTCTCAGACTGGCCTaGCATTCTGTGGTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFSLRLA*HSVVGL
Trigger: CAGACCGACCACAGAATGGCAGGCCAGTCTGAGAGA...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTGGTCGTCTTCTTCCTaGCCCTTAGTGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYWSSSS*PLVWPA
Trigger: TGCTGGCCACACTAAGGGCCAGGAAGAAGACGACCA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCATGCTGGATTCAGCCTaGCTAGGCACTCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCMLDSA*LGTLRA
Trigger: TGCCCTAAGAGTGCCTAGCCAGGCTGAATCCAGCAT...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTGCTCTTCTCTCAGACTaGCCTGCCATTCTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFALLSD*PAILWS
Trigger: CGACCACAGAATGGCAGGCCAGTCTGAGAGAAGAGC...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGGTCAGCTATTCTGTaGGCAGTGTGGTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVWSAIL*AVWLSA
Trigger: GGCAGATAACCACACTGCTCACAGAATAGCTGACCA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR TCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTGGTCAGCTATTCTGTaGGCAGTGTGGTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCWSAIL*AVWLSA
Trigger: GGCAGATAACCACACTGCTCACAGAATAGCTGACCA...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCGAGGCCATACAATCTaGGGTCAGTCTGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYRGHTI*GQSAQK
Trigger: CTTCTGAGCAGACTGACCTCAGATTGTATGGCCTCG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTCGAGGCCATACAATCTaGGGTCAGTCTGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIRGHTI*GQSAQK
Trigger: CTTCTGAGCAGACTGACCTCAGATTGTATGGCCTCG...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAAGCAGTGTGGTTATCTaGCTTCCTTTCGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVSSVVI*LPFGLV
Trigger: AACCAGGCCGAAAGGAAGGCAGATAACCACACTGCT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTATTCTGCGGTCCATCTaGTCGGAAGCTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LFFIISCTLFYTLCCMCAILRSI*SEALLS
Trigger: TGAGAGAAGAGCTTCCGAGCAGATGGACCGCAGAAT...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGCCTTCCTTTCGGCCTaGTTCTTCTGGTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYAFLSA*FFWSSS
Trigger: AGAAGACGACCAGAAGAACCAGGCCGAAAGGAAGGC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTGCCTTCCTTTCGGCCTaGTTCTTCTGGTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIAFLSA*FFWSSS
Trigger: AGAAGACGACCAGAAGAACCAGGCCGAAAGGAAGGC...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATATGCTGGATTCAGCCTaGCTAGGCACTCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYMLDSA*LGTLRA
Trigger: TGCCCTAAGAGTGCCTAGCCAGGCTGAATCCAGCAT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTACCTCTCTGGTCAGATaGCATAGCCAGTCTACCATC +
Preference number: 4 (lower is better)
Translates to: LFFIISCTLFYTLCCMCATSLVR*HSQSTI
Trigger: GATGGTAGACTGGCTATGCCATCTGACCAGAGAGGT...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGTCTGGAACCTCTCTaGTCAGATGGCATAGCCAGT +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVCLEPL*SDGIAS
Trigger: ACTGGCTATGCCATCTGACCAGAGAGGTTCCAGACA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTTGTCTGGAACCTCTCTaGTCAGATGGCATAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LFFIISCTLFYTLCCMCACLEPL*SDGIAS
Trigger: ACTGGCTATGCCATCTGACCAGAGAGGTTCCAGACA...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTGTGGTCGGTCTGTCTaGAACCTCTCTGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYCGRSV*NLSGQM
Trigger: CATCTGACCAGAGAGGTTCCAGACAGACCGACCACA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTGTGGTCGGTCTGTCTaGAACCTCTCTGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHICGRSV*NLSGQM
Trigger: CATCTGACCAGAGAGGTTCCAGACAGACCGACCACA...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGTTCAGCTAGTTCAGTaGCTTGGCCGTACACTTGGT +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVVQLVQ*LGRTLG
Trigger: ACCAAGTGTACGGCCAAGCCACTGAACTAGCTGAAC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTTCAGCTAGTTCAGTaGCTTGGCCGTACACTTGGT +
Preference number: 4 (lower is better)
Translates to: LFFIISCTLFYTLCCMCAVQLVQ*LGRTLG
Trigger: ACCAAGTGTACGGCCAAGCCACTGAACTAGCTGAAC...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTCCTAACTTTCCCTaGCATTCTGCGGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVSPNFP*HSAVNL
Trigger: CAGATTGACCGCAGAATGTCAGGGAAAGTTAGGAGA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTCTCCTAACTTTCCCTaGCATTCTGCGGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCSPNFP*HSAVNL
Trigger: CAGATTGACCGCAGAATGTCAGGGAAAGTTAGGAGA...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTACTTGGAAGTTACTGGTaGATCTGGCATCAACTGGGT +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVLGSYW*IWHQLG
Trigger: ACCCAGTTGATGCCAGATTCACCAGTAACTTCCAAG...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTCTTGGAAGTTACTGGTaGATCTGGCATCAACTGGGT +
Preference number: 4 (lower is better)
Translates to: LFFIISCTLFYTLCCMCALGSYW*IWHQLG
Trigger: ACCCAGTTGATGCCAGATTCACCAGTAACTTCCAAG...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTAGCAGTGTGGTTATCTaGCTTCCTTTCGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFSSVVI*LPFGLV
Trigger: AACCAGGCCGAAAGGAAGGCAGATAACCACACTGCT...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATATTCTGCGGTCCATCTaGTCGGAAGCTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYILRSI*SEALLS
Trigger: TGAGAGAAGAGCTTCCGAGCAGATGGACCGCAGAAT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTACTTTCCCTGACATTCTaGGGTCAATCTGTACGGAAG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVLSLTF*GQSVRK
Trigger: CTTCCGTACAGATTGACCGCAGAATGTCAGGGAAAG...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAAATCTGAGGTCAGTCTaGTCAGAAGTTCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVNLRSV*SEVPGS
Trigger: TGACCCAGGAACTTCTGAGCAGACTGACCTCAGATT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCAATCTGAGGTCAGTCTaGTCAGAAGTTCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCNLRSV*SEVPGS
Trigger: TGACCCAGGAACTTCTGAGCAGACTGACCTCAGATT...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTACCTCTTTGTCCTCTTTaGTGTTGCCTAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVPLCPL*CCLTGE
Trigger: TTCCCCAGTTAGGCAACAGCAAAGAGGACAAAGAGG...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCCCTCTTTGTCCTCTTTaGTGTTGCCTAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCPLCPL*CCLTGE
Trigger: TTCCCCAGTTAGGCAACAGCAAAGAGGACAAAGAGG...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATACCTCTCTGGTCAGATaGCATAGCCAGTCTACCATC +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYTSLVR*HSQSTI
Trigger: GATGGTAGACTGGCTATGCCATCTGACCAGAGAGGT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGTACGGAAGGTCTTTaGTCAGATGGTACGGACGAT +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVCTEGL*SDGTDD
Trigger: ATCGTCCGTACCATCTGACCAAAGACCTTCCGTACA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTTGTACGGAAGGTCTTTaGTCAGATGGTACGGACGAT +
Preference number: 4 (lower is better)
Translates to: LFFIISCTLFYTLCCMCACTEGL*SDGTDD
Trigger: ATCGTCCGTACCATCTGACCAAAGACCTTCCGTACA...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGTTCAGCTAGTTCAGTaGCTTGGCCGTACACTTGGT +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYVQLVQ*LGRTLG
Trigger: ACCAAGTGTACGGCCAAGCCACTGAACTAGCTGAAC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGCTTGGTCAATAGCCTaGTGTTCAGCTAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVAWSIA*CSASSV
Trigger: CACTGAACTAGCTGAACACCAGGCTATTGACCAAGC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCGCTTGGTCAATAGCCTaGTGTTCAGCTAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCAWSIA*CSASSV
Trigger: CACTGAACTAGCTGAACACCAGGCTATTGACCAAGC...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAAACTGGGTTGTAGGGTaGGATAGTGGTTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVNWVVG*DSGCIL
Trigger: CAGAATGCAACCACTATCCCACCCTACAACCCAGTT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGAATCTGGCATCAACTaGGTTGTAGGGTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVESGIN*VVGWDS
Trigger: ACTATCCCACCCTACAACCCAGTTGATGCCAGATTC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTCTCCTAACTTTCCCTaGCATTCTGCGGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYSPNFP*HSAVNL
Trigger: CAGATTGACCGCAGAATGTCAGGGAAAGTTAGGAGA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGACAGCTGGTCTTTATaGTTAGCTTGTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVDSWSL*LACLSA
Trigger: AGCAGACAGACAAGCTAATCATAAAGACCAGCTGTC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCGACAGCTGGTCTTTATaGTTAGCTTGTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCDSWSL*LACLSA
Trigger: AGCAGACAGACAAGCTAATCATAAAGACCAGCTGTC...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTGAAGGCTTGGAATTaGGGTCTACTTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYLKAWN*GLLGYP
Trigger: AGGATAGCCAAGTAGACCTCAATTCCAAGCCTTCAG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTCTGAAGGCTTGGAATTaGGGTCTACTTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHILKAWN*GLLGYP
Trigger: AGGATAGCCAAGTAGACCTCAATTCCAAGCCTTCAG...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTTGGAAGTTACTGGTaGATCTGGCATCAACTGGGT +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYLGSYW*IWHQLG
Trigger: ACCCAGTTGATGCCAGATTCACCAGTAACTTCCAAG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTATAGTTCAATTTGGATaGGATGGAGGGGAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LFFIISCTLFYTLCCMCAIVQFG*DGGESW
Trigger: CCAAGACTCCCCTCCATCTCATCCAAATTGAACTAT...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTTTCCCTGACATTCTaGGGTCAATCTGTACGGAAG +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYLSLTF*GQSVRK
Trigger: CTTCCGTACAGATTGACCGCAGAATGTCAGGGAAAG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTCTTTCCCTGACATTCTaGGGTCAATCTGTACGGAAG +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHILSLTF*GQSVRK
Trigger: CTTCCGTACAGATTGACCGCAGAATGTCAGGGAAAG...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATAATCTGAGGTCAGTCTaGTCAGAAGTTCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYNLRSV*SEVPGS
Trigger: TGACCCAGGAACTTCTGAGCAGACTGACCTCAGATT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCCTCTTTGTCCTCTTTaGTGTTGCCTAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYPLCPL*CCLTGE
Trigger: TTCCCCAGTTAGGCAACAGCAAAGAGGACAAAGAGG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGGGTGGGATAGTGGTTaGATTCTGAGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVGWDSG*ILSFHF
Trigger: GAAATGGAAACTCAGAATGCAACCACTATCCCACCC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGTTCTTCTCTCAGCCTaGGTAGGTAATCTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVVLLSA*VGNLRS
Trigger: TGAACGAAGATTACCTACCCAGGCTGAGAGAAGAAC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTGTACAGAAGGACTTTaGTCAGATGGGACGGATGAC +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYCTEGL*SDGTDD
Trigger: GTCATCCGTCCCATCTGACCAAAGTCCTTCTGTACA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTGTACAGAAGGACTTTaGTCAGATGGGACGGATGAC +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHICTEGL*SDGTDD
Trigger: GTCATCCGTCCCATCTGACCAAAGTCCTTCTGTACA...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTGTACGGAAGGTCTTTaGTCAGATGGTACGGACGAT +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYCTEGL*SDGTDD
Trigger: ATCGTCCGTACCATCTGACCAAAGACCTTCCGTACA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGCTTGGTCAATAGCCTaGTGTTCAGCTAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYAWSIA*CSASSV
Trigger: CACTGAACTAGCTGAACACCAGGCTATTGACCAAGC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGTCTGTCTGCTAAGTaGTCAGTCTGGTCAGATTCA +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVCLSAK*SVWSDS
Trigger: TGAATCTGACCAGACTGACCACTTAGCAGACAGACA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTAACTGGGTTGTAGGGTaGGATAGTGGTTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHINWVVG*DSGCIL
Trigger: CAGAATGCAACCACTATCCCACCCTACAACCCAGTT...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGAATCTGGCATCAACTaGGTTGTAGGGTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYESGIN*VVGWDS
Trigger: ACTATCCCACCCTACAACCCAGTTGATGCCAGATTC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTGAATCTGGCATCAACTaGGTTGTAGGGTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFESGIN*VVGWDS
Trigger: ACTATCCCACCCTACAACCCAGTTGATGCCAGATTC...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGACAGCTGGTCTTTATaGTTAGCTTGTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYDSWSL*LACLSA
Trigger: AGCAGACAGACAAGCTAATCATAAAGACCAGCTGTC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATATAGTTCAATTTGGATaGGATGGAGGGGAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYIVQFG*DGGESW
Trigger: CCAAGACTCCCCTCCATCTCATCCAAATTGAACTAT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAATTAGCTTGGCTAGATaGCTTGCCTTTAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVISLAR*LAFSLF
Trigger: GAACAGACTAAAGGCAAGGCATCTAGCCAAGCTAAT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAAGTCTACCATCAATCTaGCCAGAAGTTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVSLPSI*PEVLLS
Trigger: TGAGAGAAGAACTTCTGGGCAGATTGATGGTAGACT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTAGTCTACCATCAATCTaGCCAGAAGTTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LFFIISCTLFYTLCCMCASLPSI*PEVLLS
Trigger: TGAGAGAAGAACTTCTGGGCAGATTGATGGTAGACT...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGGGTGGGATAGTGGTTaGATTCTGAGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYGWDSG*ILSFHF
Trigger: GAAATGGAAACTCAGAATGCAACCACTATCCCACCC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTGGGTGGGATAGTGGTTaGATTCTGAGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFGWDSG*ILSFHF
Trigger: GAAATGGAAACTCAGAATGCAACCACTATCCCACCC...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAACTCCGTTGGTAGCTTaGCTAAATATGCTGGATTCA +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVTPLVA*LNMLDS
Trigger: TGAATCCAGCATATTTAGCCAAGCTACCAACGGAGT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTGTTCTTCTCTCAGCCTaGGTAGGTAATCTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIVLLSA*VGNLRS
Trigger: TGAACGAAGATTACCTACCCAGGCTGAGAGAAGAAC...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGTGAGCATTGTCAACTaGAGGTTGATCAGCATTACT +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVVSIVN*RLISIT
Trigger: AGTAATGCTGATCAACCTCCAGTTGACAATGCTCAC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTGTCTGTCTGCTAAGTaGTCAGTCTGGTCAGATTCA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYCLSAK*SVWSDS
Trigger: TGAATCTGACCAGACTGACCACTTAGCAGACAGACA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTTGTCTGTCTGCTAAGTaGTCAGTCTGGTCAGATTCA +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFCLSAK*SVWSDS
Trigger: TGAATCTGACCAGACTGACCACTTAGCAGACAGACA...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGCTTGGTCTTTTGCTTaGAAGTTACTGGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVAWSFA*KLLVNL
Trigger: CAGATTCACCAGTAACTTCCAAGCAAAAGACCAAGC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCAATTTGGATGAGATaGAGGGGAGTCTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVSIWMR*RGVLGK
Trigger: TTTTCCCAAGACTCCCCTCCATCTCATCCAAATTGA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATAGTTTCCATTTCAACTaGAGGCTTGGAATTGAGGTC +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYSFHFN*RLGIEV
Trigger: GACCTCAATTCCAAGCCTTCAGTTGAAATGGAAACT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTAGTTTCCATTTCAACTaGAGGCTTGGAATTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFSFHFN*RLGIEV
Trigger: GACCTCAATTCCAAGCCTTCAGTTGAAATGGAAACT...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTCCATGTATTGGAGTaGAACTTGGTAAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVFHVLE*NLVRIF
Trigger: GAAGATCCTTACCAAGTTTCACTCCAATACATGGAA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTATTAGCTTGGCTAGATaGCTTGCCTTTAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIISLAR*LAFSLF
Trigger: GAACAGACTAAAGGCAAGGCATCTAGCCAAGCTAAT...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTACCATCACTCTGTTCATaGTGTACATTATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVPSLCS*CTLLAW
Trigger: CCAAGCTAATAATGTACAGCATGAACAGAGTGATGG...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTGTCCTCTTTGCTGTTaGCTAACTGGGGAAATATTC +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYCPLCC*LTGEIF
Trigger: GAATATTTCCCCAGTTAGGCAACAGCAAAGAGGACA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTTGTCCTCTTTGCTGTTaGCTAACTGGGGAAATATTC +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFCPLCC*LTGEIF
Trigger: GAATATTTCCCCAGTTAGGCAACAGCAAAGAGGACA...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTACTCCGTTGGTAGCTTaGCTAAATATGCTGGATTCA +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHITPLVA*LNMLDS
Trigger: TGAATCCAGCATATTTAGCCAAGCTACCAACGGAGT...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGTGAGCATTGTCAACTaGAGGTTGATCAGCATTACT +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYVSIVN*RLISIT
Trigger: AGTAATGCTGATCAACCTCCAGTTGACAATGCTCAC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTGTGAGCATTGTCAACTaGAGGTTGATCAGCATTACT +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFVSIVN*RLISIT
Trigger: AGTAATGCTGATCAACCTCCAGTTGACAATGCTCAC...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGAATTGAGGTCTACTTaGCTATCCTCAAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVELRST*LSSNLQ
Trigger: CTGCAAATTTGAGGATAGCCAAGTAGACCTCAATTC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCGAATTGAGGTCTACTTaGCTATCCTCAAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCELRST*LSSNLQ
Trigger: CTGCAAATTTGAGGATAGCCAAGTAGACCTCAATTC...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTGCTTGGTCTTTTGCTTaGAAGTTACTGGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIAWSFA*KLLVNL
Trigger: CAGATTCACCAGTAACTTCCAAGCAAAAGACCAAGC...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTCAATTTGGATGAGATaGAGGGGAGTCTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYSIWMR*RGVLGK
Trigger: TTTTCCCAAGACTCCCCTCCATCTCATCCAAATTGA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTCAATTTGGATGAGATaGAGGGGAGTCTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHISIWMR*RGVLGK
Trigger: TTTTCCCAAGACTCCCCTCCATCTCATCCAAATTGA...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAATAGTGGTTGCATTCTaGGTTTCCATTTCAACTGAA +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVIVVAF*VSISTE
Trigger: TTCAGTTGAAATGGAAACTCAGAATGCAACCACTAT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCATAGTGGTTGCATTCTaGGTTTCCATTTCAACTGAA +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCIVVAF*VSISTE
Trigger: TTCAGTTGAAATGGAAACTCAGAATGCAACCACTAT...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTTCCATGTATTGGAGTaGAACTTGGTAAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYFHVLE*NLVRIF
Trigger: GAAGATCCTTACCAAGTTTCACTCCAATACATGGAA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR TCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTTTCCATGTATTGGAGTaGAACTTGGTAAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFFHVLE*NLVRIF
Trigger: GAAGATCCTTACCAAGTTTCACTCCAATACATGGAA...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAATTAACCTGATCATCTaGTCTAAGGTCAGAAACATC +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVINLII*SKVRNI
Trigger: GATGTTTCTGACCTTAGAGCAGATGATCAGGTTAAT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR GCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCATTAACCTGATCATCTaGTCTAAGGTCAGAAACATC +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCINLII*SKVRNI
Trigger: GATGTTTCTGACCTTAGAGCAGATGATCAGGTTAAT...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTCCATCACTCTGTTCATaGTGTACATTATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFPSLCS*CTLLAW
Trigger: CCAAGCTAATAATGTACAGCATGAACAGAGTGATGG...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATAAGAGCTTGGTCTTTTaGTTGGAAGTTACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYKSLVF*LEVTGE
Trigger: TTCACCAGTAACTTCCAAGCAAAAGACCAAGCTCTT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTAAGAGCTTGGTCTTTTaGTTGGAAGTTACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIKSLVF*LEVTGE
Trigger: TTCACCAGTAACTTCCAAGCAAAAGACCAAGCTCTT...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTTACAGATGTTTTGTaGTCAACGAGGCCATACAAT +
Preference number: 4 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVFTDVL*STRPYN
Trigger: ATTGTATGGCCTCGTTGACCACAAAACATCTGTAAA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGAATTGAGGTCTACTTaGCTATCCTCAAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYELRST*LSSNLQ
Trigger: CTGCAAATTTGAGGATAGCCAAGTAGACCTCAATTC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTTGGGAAAAGAGCTTaGTCTTTTGCTTGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYLGKRA*SFAWKL
Trigger: TAACTTCCAAGCAAAAGACCAAGCTCTTTTCCCAAG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTCTTGGGAAAAGAGCTTaGTCTTTTGCTTGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHILGKRA*SFAWKL
Trigger: TAACTTCCAAGCAAAAGACCAAGCTCTTTTCCCAAG...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR TCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATATAGTGGTTGCATTCTaGGTTTCCATTTCAACTGAA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYIVVAF*VSISTE
Trigger: TTCAGTTGAAATGGAAACTCAGAATGCAACCACTAT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATATCTGCTGGAATATTTaGAGAATGTGGTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYICWNI*RMWCFS
Trigger: GGAAAAACACCACATTCTGCAAATATTCCAGCAGAT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR GCA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCGTAATCTGGAATATTTaGAGAATGTGGTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCVIWNI*RMWCFS
Trigger: GGAAAAACACCACATTCTGCAAATATTCCAGATTAC...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTGTACATTATTAGCTTaGCTAGATGCCTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYCTLLA*LDALPL
Trigger: TAAAGGCAAGGCATCTAGCCAAGCTAATAATGTACA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CCA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTGTACATTATTAGCTTaGCTAGATGCCTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: HMIVNNTEERLVLCRFHICTLLA*LDALPL
Trigger: TAAAGGCAAGGCATCTAGCCAAGCTAATAATGTACA...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CCA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTTTTACAGATGTTTTGTaGTCAACGAGGCCATACAAT +
Preference number: 4 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFFTDVL*STRPYN
Trigger: ATTGTATGGCCTCGTTGACCACAAAACATCTGTAAA...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS TCA 90 bp GTTCTTCTGGTCGTCTTCTTCCTGGCCCTTAGTGTGGCCAGCACTTaGGGGAGCGGCTGGGCTTTCATGTTTCAAGGGTTCAGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: VLLVVFFLALSVAST*GSGWAFMFQGFSQS
Trigger: GCTCTGGCTGAACCCTTGAAACATGAAAGCCCAGCCGCTCCCTCAAGTGCTGGCCACACTAAGGGCCAGGAAGAAGACGACCAGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000494105.2
CDS CCA 90 bp CTTTCGGCCTGGTTCTTCTGGTCGTCTTCTTCCTGGCCCTTAGTGTaGCCAGCACTTGAGGGAGCGGCTGGGCTTTCATGTTTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LSAWFFWSSSSWPLV*PALEGAAGLSCFKG
Trigger: ACCCTTGAAACATGAAAGCCCAGCCGCTCCCTCAAGTGCTGGCCACACTAAGGGCCAGGAAGAAGACGACCAGAAGAACCAGGCCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000494105.2
CDS CCA 90 bp TTATCTGCCTTCCTTTCGGCCTGGTTCTTCTGGTCGTCTTCTTCCTaGCCCTTAGTGTGGCCAGCACTTGAGGGAGCGGCTGGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: LSAFLSAWFFWSSSS*PLVWPALEGAAGLS
Trigger: TGAAAGCCCAGCCGCTCCCTCAAGTGCTGGCCACACTAAGGGCCAGGAAGAAGACGACCAGAAGAACCAGGCCGAAAGGAAGGCAGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000494105.2
CDS TCA 90 bp TCAGCCTGGCTAGGCACTCTTAGGGCAGTCTGGTCAGCTATTCTGTaGGCAGTGTGGTTATCTGCCTTCCTTTCGGCCTGGTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SAWLGTLRAVWSAIL*AVWLSAFLSAWFFW
Trigger: CCAGAAGAACCAGGCCGAAAGGAAGGCAGATAACCACACTGCTCACAGAATAGCTGACCAGACTGCCCTAAGAGTGCCTAGCCAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000494105.2
CDS CCA 90 bp GCCTGCCATTCTGTGGTCGGTCTGTCTGGAACCTCTCTGGTCAGATaGCATAGCCAGTCTACCATCAATCTGCCCAGAAGTTCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: ACHSVVGLSGTSLVR*HSQSTINLPRSSSL
Trigger: GAGAGAAGAACTTCTGGGCAGATTGATGGTAGACTGGCTATGCCATCTGACCAGAGAGGTTCCAGACAGACCGACCACAGAATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CCA 90 bp TCAGACTGGCCTGCCATTCTGTGGTCGGTCTGTCTGGAACCTCTCTaGTCAGATGGCATAGCCAGTCTACCATCAATCTGCCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: SDWPAILWSVCLEPL*SDGIASLPSICPEV
Trigger: AACTTCTGGGCAGATTGATGGTAGACTGGCTATGCCATCTGACCAGAGAGGTTCCAGACAGACCGACCACAGAATGGCAGGCCAGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS TCA 90 bp CTAAGGTCAGAAACATCAGCAGGGTTGGATGCTCTGCGGCCAGCCTaGCCAGGTGTACTATGCCCATTTTGTTCAGCTACTCCGTTGGTA +
Preference number: 5 (lower is better)
Translates to: LRSETSAGLDALRPA*PGVLCPFCSATPLV
Trigger: TACCAACGGAGTAGCTGAACAAAATGGGCATAGTACACCTGGTCAGGCTGGCCGCAGAGCATCCAACCCTGCTGATGTTTCTGACCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS GCA 90 bp AACCTGATCATCTGCTCTAAGGTCAGAAACATCAGCAGGGTTGGATaGTCTGCGGCCAGCCTGACCAGGTGTACTATGCCCATTTTGTTC +
Preference number: 5 (lower is better)
Translates to: NLIICSKVRNISRVG*SAASLTRCTMPILF
Trigger: GAACAAAATGGGCATAGTACACCTGGTCAGGCTGGCCGCAGAGCATCCAACCCTGCTGATGTTTCTGACCTTAGAGCAGATGATCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS TCA 90 bp GCCTGGTGTTCAGCTAGTTCAGTGGCTTGGCCGTACACTTGGTGGTaGGTCTTTACAGATGTTTTGTGGTCAACGAGGCCATACAATCTG +
Preference number: 5 (lower is better)
Translates to: AWCSASSVAWPYTWW*VFTDVLWSTRPYNL
Trigger: CAGATTGTATGGCCTCGTTGACCACAAAACATCTGTAAAGACTCACCACCAAGTGTACGGCCAAGCCACTGAACTAGCTGAACACCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS GCA 90 bp CTGGAACCTCTCTGGTCAGATGGCATAGCCAGTCTACCATCAATCTaGCCAGAAGTTCTTCTCTCAGCCTGGGTAGGTAATCTTCGTTCA +
Preference number: 5 (lower is better)
Translates to: LEPLWSDGIASLPSI*PEVLLSAWVGNLRS
Trigger: TGAACGAAGATTACCTACCCAGGCTGAGAGAAGAACTTCTGGGCAGATTGATGGTAGACTGGCTATGCCATCTGACCAGAGAGGTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CCA 90 bp CCAGGTGTACTATGCCCATTTTGTTCAGCTACTCCGTTGGTAGCTTaGCTAAATATGCTGGATTCAGCCTGGCTAGGCACTCTTAGGGCA +
Preference number: 5 (lower is better)
Translates to: PGVLCPFCSATPLVA*LNMLDSAWLGTLRA
Trigger: TGCCCTAAGAGTGCCTAGCCAGGCTGAATCCAGCATATTTAGCCAAGCTACCAACGGAGTAGCTGAACAAAATGGGCATAGTACACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS GCA 90 bp CTTGCCTTTAGTCTGTTCAGACGGTGTTTGATTAACCTGATCATCTaGTCTAAGGTCAGAAACATCAGCAGGGTTGGATGCTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: LAFSLFRRCLINLII*SKVRNISRVGCSAA
Trigger: GGCCGCAGAGCATCCAACCCTGCTGATGTTTCTGACCTTAGAGCAGATGATCAGGTTAATCAAACACCGTCTGAACAGACTAAAGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS GCA 90 bp TGCAGGGTTGTACTCTGTAGTCAGCCTCTTTGTCCTCTTTGCTGTTaGCTAACTGGGGAAATATTCTGTCTTCAGACTGGCCACGTGTTT +
Preference number: 5 (lower is better)
Translates to: CRVVLCSQPLCPLCC*LTGEIFCLQTGHVF
Trigger: AAACACGTGGCCAGTCTGAAGACAGAATATTTCCCCAGTTAGGCAACAGCAAAGAGGACAAAGAGGCTGACTACAGAGTACAACCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS CCA 90 bp AGCTTGGTCTTTTGCTTGGAAGTTACTGGTGAATCTGGCATCAACTaGGTTGTAGGGTGGGATAGTGGTTGCATTCTGAGTTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: SLVFCLEVTGESGIN*VVGWDSGCILSFHF
Trigger: GAAATGGAAACTCAGAATGCAACCACTATCCCACCCTACAACCCAGTTGATGCCAGATTCACCAGTAACTTCCAAGCAAAAGACCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS-3UTR CAA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTTCAGCCAGAGCCTCTaGCGGAGGCTCTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCFSQSL*RRLFHF
Trigger: GAAATGGAAGAGCCTCCGCAAGAGGCTCTGGCTGAA...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS TCA 90 bp GTTGTAGGGTGGGATAGTGGTTGCATTCTGAGTTTCCATTTCAACTaGAGGCTTGGAATTGAGGTCTACTTGGCTATCCTCAAATTTGCA +
Preference number: 5 (lower is better)
Translates to: VVGWDSGCILSFHFN*RLGIEVYLAILKFA
Trigger: TGCAAATTTGAGGATAGCCAAGTAGACCTCAATTCCAAGCCTTCAGTTGAAATGGAAACTCAGAATGCAACCACTATCCCACCCTACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS GCA 90 bp CTGACCATCACTCTGTTCATGCTGTACATTATTAGCTTGGCTAGATaGCTTGCCTTTAGTCTGTTCAGACGGTGTTTGATTAACCTGATC +
Preference number: 5 (lower is better)
Translates to: LTITLFMLYIISLAR*LAFSLFRRCLINLI
Trigger: GATCAGGTTAATCAAACACCGTCTGAACAGACTAAAGGCAAGGCATCTAGCCAAGCTAATAATGTACAGCATGAACAGAGTGATGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTTCAGCCAGAGCCTCTaGCGGAGGCTCTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYFSQSL*RRLFHF
Trigger: GAAATGGAAGAGCCTCCGCAAGAGGCTCTGGCTGAA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CAA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTACTGTACGGAAGGTCTTaGGTCAGATGGTACGGACGA +
Preference number: 5 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVLYGRS*VRWYGR
Trigger: TCGTCCGTACCATCTGACCAAAGACCTTCCGTACAG...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTGTACGGAAGGTCTTaGGTCAGATGGTACGGACGA +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYLYGRS*VRWYGR
Trigger: TCGTCCGTACCATCTGACCAAAGACCTTCCGTACAG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTCTGTACGGAAGGTCTTaGGTCAGATGGTACGGACGA +
Preference number: 5 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFLYGRS*VRWYGR
Trigger: TCGTCCGTACCATCTGACCAAAGACCTTCCGTACAG...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGGCTTGGCCGTACACTaGGTGGTGAGTCTTTACAGA +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYGLAVH*VVSLYR
Trigger: TCTGTAAAGACTCACCACCAAGTGTACGGCCAAGCC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTGGCTTGGCCGTACACTaGGTGGTGAGTCTTTACAGA +
Preference number: 5 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIGLAVH*VVSLYR
Trigger: TCTGTAAAGACTCACCACCAAGTGTACGGCCAAGCC...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAAGATGGAGGGGAGTCTaGGGAAAAGAGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVRWRGV*GKELGL
Trigger: AAGACCAAGCTCTTTTCCCAAGACTCCCCTCCATCT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCAGATGGAGGGGAGTCTaGGGAAAAGAGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCRWRGV*GKELGL
Trigger: AAGACCAAGCTCTTTTCCCAAGACTCCCCTCCATCT...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGCTTGGCTAGATGCCTaGCCTTTAGTCTGTTCAGAC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYAWLDA*PLVCSD
Trigger: GTCTGAACAGACTAAAGGCAAGGCATCTAGCCAAGC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CAA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTGCTTGGCTAGATGCCTaGCCTTTAGTCTGTTCAGAC +
Preference number: 5 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIAWLDA*PLVCSD
Trigger: GTCTGAACAGACTAAAGGCAAGGCATCTAGCCAAGC...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTCTCAAATTTGCAGGGTaGTACTCTGTAGTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LFFIISCTLFYTLCCMCALKFAG*YSVVSL
Trigger: GAGGCTGACTACAGAGTACAACCCTGCAAATTTGAG...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATAGATGGAGGGGAGTCTaGGGAAAAGAGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYRWRGV*GKELGL
Trigger: AAGACCAAGCTCTTTTCCCAAGACTCCCCTCCATCT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGTACTATGCCCATTTaGTTCAGCTACTCCGTTGGT +
Preference number: 5 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVCTMPI*FSYSVG
Trigger: ACCAACGGAGTAGCTGAACAAAATGGGCATAGTACA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CAA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTACTATGCCCATTTaGTTCAGCTACTCCGTTGGT +
Preference number: 5 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCCTMPI*FSYSVG
Trigger: ACCAACGGAGTAGCTGAACAAAATGGGCATAGTACA...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAGTCTTTACAGATGTTTaGTGGTCAACGAGGCCATAC +
Preference number: 5 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVVFTDV*WSTRPY
Trigger: GTATGGCCTCGTTGACCACAAAACATCTGTAAAGAC...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAAGCATTACTATGAGCTaGGTCAATAGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVSITMS*VNSLVF
Trigger: GAACACCAGGCTATTGACCAAGCTCATAGTAATGCT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTAGCATTACTATGAGCTaGGTCAATAGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: LFFIISCTLFYTLCCMCASITMS*VNSLVF
Trigger: GAACACCAGGCTATTGACCAAGCTCATAGTAATGCT...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTCAAATTTGCAGGGTaGTACTCTGTAGTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYLKFAG*YSVVSL
Trigger: GAGGCTGACTACAGAGTACAACCCTGCAAATTTGAG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTACTCCGTTGGTAGCTaGGCTAAATATGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYYSVGS*AKYAGF
Trigger: GAATCCAGCATATTTAGCCAAGCTACCAACGGAGTA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CAA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTACTCCGTTGGTAGCTaGGCTAAATATGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: HMIVNNTEERLVLCRFHIYSVGS*AKYAGF
Trigger: GAATCCAGCATATTTAGCCAAGCTACCAACGGAGTA...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTGTTCAGCTACTCCGTaGGTAGCTTGGCTAAATATG +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYCSATP*VAWLNM
Trigger: CATATTTAGCCAAGCTACCAACGGAGTAGCTGAACA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTGTTCAGACGGTGTTaGATTAACCTGATCATCTGC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYLFRRC*INLIIC
Trigger: GCAGATGATCAGGTTAATCAAACACCGTCTGAACAG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CAA 90 bp CACATGATTGTAAACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTCTGTTCAGACGGTGTTaGATTAACCTGATCATCTGC +
Preference number: 5 (lower is better)
Translates to: HMIVNNTEERLVLCRFHILFRRC*INLIIC
Trigger: GCAGATGATCAGGTTAATCAAACACCGTCTGAACAG...AATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGTTTACAATCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTACTGTACATTATTAGCTaGGCTAGATGCCTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVLYIIS*ARCLAF
Trigger: AAAGGCAAGGCATCTAGCCAAGCTAATAATGTACAG...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CAA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTCTGTACATTATTAGCTaGGCTAGATGCCTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: LFFIISCTLFYTLCCMCALYIIS*ARCLAF
Trigger: AAAGGCAAGGCATCTAGCCAAGCTAATAATGTACAG...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGTCTTTACAGATGTTTaGTGGTCAACGAGGCCATAC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYVFTDV*WSTRPY
Trigger: GTATGGCCTCGTTGACCACAAAACATCTGTAAAGAC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTGTCTTTACAGATGTTTaGTGGTCAACGAGGCCATAC +
Preference number: 5 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFVFTDV*WSTRPY
Trigger: GTATGGCCTCGTTGACCACAAAACATCTGTAAAGAC...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATAGCATTACTATGAGCTaGGTCAATAGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYSITMS*VNSLVF
Trigger: GAACACCAGGCTATTGACCAAGCTCATAGTAATGCT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTAATTGTCAACTGGAGGTaGATCAGCATTACTATGAGC +
Preference number: 5 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVIVNWR*ISITMS
Trigger: GCTCATAGTAATGCTGATCAACCTCCAGTTGACAAT...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTGTCCTCTTTGCTGTaGCCTAACTGGGGAAATATT +
Preference number: 5 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVLSSLL*PNWGNI
Trigger: AATATTTCCCCAGTTAGGCAACAGCAAAGAGGACAA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp TCTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCGGAATTGAGGTCTACTaGGCTATCCTCAAATTTGCA +
Preference number: 5 (lower is better)
Translates to: SLFHHFLHFVLYTLLYVCGIEVY*AILKFA
Trigger: TGCAAATTTGAGGATAGCCAAGTAGACCTCAATTCC...GCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp GAATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTTGGGAAAAGAGCTaGGTCTTTTGCTTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: EFRVVRTLFYTLCCMCAVSWEKS*VFCLEV
Trigger: AACTTCCAAGCAAAAGACCAAGCTCTTTTCCCAAGA...TACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp CTCTTTTTCATCATTTCCTGCACTTTGTTCTATACACTTTGCTGTATGTGTGCTTCTTGGGAAAAGAGCTaGGTCTTTTGCTTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: LFFIISCTLFYTLCCMCASWEKS*VFCLEV
Trigger: AACTTCCAAGCAAAAGACCAAGCTCTTTTCCCAAGA...AGCACACATACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGATGAAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS TCA 90 bp CTGCTGGAATATTTGCAGAATGTGGTGTTTTTCCATGTATTGGAGTaGAACTTGGTAAGGATCTTCATAAACTATAGAAGGGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: LLEYLQNVVFFHVLE*NLVRIFINYRREPS
Trigger: AGAAGGTTCCCTTCTATAGTTTATGAAGATCCTTACCAAGTTTCACTCCAATACATGGAAAAACACCACATTCTGCAAATATTCCAGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295622.6
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATATTGTCAACTGGAGGTaGATCAGCATTACTATGAGC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYIVNWR*ISITMS
Trigger: GCTCATAGTAATGCTGATCAACCTCCAGTTGACAAT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTATTGTCAACTGGAGGTaGATCAGCATTACTATGAGC +
Preference number: 5 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFIVNWR*ISITMS
Trigger: GCTCATAGTAATGCTGATCAACCTCCAGTTGACAAT...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTTGTCCTCTTTGCTGTaGCCTAACTGGGGAAATATT +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYLSSLL*PNWGNI
Trigger: AATATTTCCCCAGTTAGGCAACAGCAAAGAGGACAA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTTTGTCCTCTTTGCTGTaGCCTAACTGGGGAAATATT +
Preference number: 5 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFLSSLL*PNWGNI
Trigger: AATATTTCCCCAGTTAGGCAACAGCAAAGAGGACAA...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATGGAATTGAGGTCTACTaGGCTATCCTCAAATTTGCA +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYGIEVY*AILKFA
Trigger: TGCAAATTTGAGGATAGCCAAGTAGACCTCAATTCC...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATATTTCAACTGAAGGCTaGGAATTGAGGTCTACTTGG +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYISTEG*ELRSTW
Trigger: CCAAGTAGACCTCAATTCCAAGCCTTCAGTTGAAAT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTATTTCAACTGAAGGCTaGGAATTGAGGTCTACTTGG +
Preference number: 5 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFISTEG*ELRSTW
Trigger: CCAAGTAGACCTCAATTCCAAGCCTTCAGTTGAAAT...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATTCTTGGGAAAAGAGCTaGGTCTTTTGCTTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYSWEKS*VFCLEV
Trigger: AACTTCCAAGCAAAAGACCAAGCTCTTTTCCCAAGA...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS TCA 90 bp CTGCTGGAATATTTGCAGAATGTGGTGTTTTTCCATGTATTGGAGTaGAACTTGGTAAGGATCTTCATAAAAGATTTGGTTACTATGGCT +
Preference number: 5 (lower is better)
Translates to: LLEYLQNVVFFHVLE*NLVRIFIKDLVTMA
Trigger: AGCCATAGTAACCAAATCTTTTATGAAGATCCTTACCAAGTTTCACTCCAATACATGGAAAAACACCACATTCTGCAAATATTCCAGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473121.1
CDS TCA 90 bp AATCTGGAATATTTGCAGAATGTGGTGTTTTTCCATGTATTGGAGTaGAACTTGGTAAGGATCTTCATAAACTATAGAAGGGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: NLEYLQNVVFFHVLE*NLVRIFINYRREPS
Trigger: AGAAGGTTCCCTTCTATAGTTTATGAAGATCCTTACCAAGTTTCACTCCAATACATGGAAAAACACCACATTCTGCAAATATTCCAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATCTTCTCTCAGATAGTTaGGATAATCTGTGTGTAATC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYLLSDS*DNLCVI
Trigger: GATTACACACAGATTATCCAAACTATCTGAGAGAAG...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTCTTCTCTCAGATAGTTaGGATAATCTGTGTGTAATC +
Preference number: 5 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFLLSDS*DNLCVI
Trigger: GATTACACACAGATTATCCAAACTATCTGAGAGAAG...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS-3UTR CAA 90 bp AATTCAGAGTTGTACGTACTTTGTTCTATACACTTTGCTGTATGTGTGCTGTATAATCTGCTGGAATATTaGCAGAATGTGGTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: NSELYVLCSIHFAVCVLYNLLEY*QNVVFF
Trigger: GAAAAACACCACATTCTGCAAATATTCCAGCAGATT...ATACAGCACACATACAGCAAAGTGTATAGAACAAAGTACGTACAACTCTGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000473121.1
CDS-3UTR CAA 90 bp ACAATACTGAAGAGAGGCTCGTTCTTTGTAGATTTCACATTTTGTCTCTCTTTTATCATTTCCTGCACTTaGTTCTATACACTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: TILKRGSFFVDFTFCLSFIISCT*FYTLCC
Trigger: ACAGCAAAGTGTATAGAACAAAGTGCAGGAAATGAT...AAAAGAGAGACAAAATGTGAAATCTACAAAGAACGAGCCTCTCTTCAGTATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494105.2
CDS CCA 72 bp TTCCTTTCGGCCTGGTTCTTCTGGTCGTCTTCTTCCTaGCCCTTAGTGTGGCCAGCACTTGAGGGAGCGGCT +
Preference number: 6 (lower is better)
Translates to: FLSAWFFWSSSS*PLVWPALEGAA
Trigger: AGCCGCTCCCTCAAGTGCTGGCCACACTAAGGGCCAGGAAGAAGACGACCAGAAGAACCAGGCCGAAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000494105.2
CDS TCA 72 bp GTCGTCTTCTTCCTGGCCCTTAGTGTGGCCAGCACTTaGGGGAGCGGCTGGGCTTTCATGTTTCAAGGGTTC +
Preference number: 6 (lower is better)
Translates to: VVFFLALSVAST*GSGWAFMFQGF
Trigger: GAACCCTTGAAACATGAAAGCCCAGCCGCTCCCTCAAGTGCTGGCCACACTAAGGGCCAGGAAGAAGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000494105.2
CDS GCA 72 bp TTGTGGTCAACGAGGCCATACAATCTGAGGTCAGTCTaGTCAGAAGTTCCTGGGTCAGCCAGGCCAGCCAAT +
Preference number: 6 (lower is better)
Translates to: LWSTRPYNLRSV*SEVPGSARPAN
Trigger: ATTGGCTGGCCTGGCTGACCCAGGAACTTCTGAGCAGACTGACCTCAGATTGTATGGCCTCGTTGACCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS CCA 72 bp CCTGCCATTCTGTGGTCGGTCTGTCTGGAACCTCTCTaGTCAGATGGCATAGCCAGTCTACCATCAATCTGC +
Preference number: 6 (lower is better)
Translates to: PAILWSVCLEPL*SDGIASLPSIC
Trigger: GCAGATTGATGGTAGACTGGCTATGCCATCTGACCAGAGAGGTTCCAGACAGACCGACCACAGAATGGCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CCA 72 bp TCTGTGGTCGGTCTGTCTGGAACCTCTCTGGTCAGATaGCATAGCCAGTCTACCATCAATCTGCCCAGAAGT +
Preference number: 6 (lower is better)
Translates to: SVVGLSGTSLVR*HSQSTINLPRS
Trigger: ACTTCTGGGCAGATTGATGGTAGACTGGCTATGCCATCTGACCAGAGAGGTTCCAGACAGACCGACCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CAA 90 bp GTTGGATGCTCTGCGGCCAGCCTGACCAGGTGTACTATGCCCATTTaGTTCAGCTACTCCGTTGGTAGCTTGGCTAAATATGCTGGATTC +
Preference number: 6 (lower is better)
Translates to: VGCSAASLTRCTMPI*FSYSVGSLAKYAGF
Trigger: GAATCCAGCATATTTAGCCAAGCTACCAACGGAGTAGCTGAACAAAATGGGCATAGTACACCTGGTCAGGCTGGCCGCAGAGCATCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS GCA 72 bp AGTCTGGTCAGCTATTCTGTGAGCAGTGTGGTTATCTaGCTTCCTTTCGGCCTGGTTCTTCTGGTCGTCTTC +
Preference number: 6 (lower is better)
Translates to: SLVSYSVSSVVI*LPFGLVLLVVF
Trigger: GAAGACGACCAGAAGAACCAGGCCGAAAGGAAGGCAGATAACCACACTGCTCACAGAATAGCTGACCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000494105.2
CDS CCA 72 bp CCGTTGGTAGCTTGGCTAAATATGCTGGATTCAGCCTaGCTAGGCACTCTTAGGGCAGTCTGGTCAGCTATT +
Preference number: 6 (lower is better)
Translates to: PLVAWLNMLDSA*LGTLRAVWSAI
Trigger: AATAGCTGACCAGACTGCCCTAAGAGTGCCTAGCCAGGCTGAATCCAGCATATTTAGCCAAGCTACCAACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS GCA 72 bp CTCTGGTCAGATGGCATAGCCAGTCTACCATCAATCTaGCCAGAAGTTCTTCTCTCAGCCTGGGTAGGTAAT +
Preference number: 6 (lower is better)
Translates to: LWSDGIASLPSI*PEVLLSAWVGN
Trigger: ATTACCTACCCAGGCTGAGAGAAGAACTTCTGGGCAGATTGATGGTAGACTGGCTATGCCATCTGACCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CAA 72 bp TCTGCGGCCAGCCTGACCAGGTGTACTATGCCCATTTaGTTCAGCTACTCCGTTGGTAGCTTGGCTAAATAT +
Preference number: 6 (lower is better)
Translates to: SAASLTRCTMPI*FSYSVGSLAKY
Trigger: ATATTTAGCCAAGCTACCAACGGAGTAGCTGAACAAAATGGGCATAGTACACCTGGTCAGGCTGGCCGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS TCA 72 bp TTACAGATGTTTTGTGGTCAACGAGGCCATACAATCTaGGGTCAGTCTGCTCAGAAGTTCCTGGGTCAGCCA +
Preference number: 6 (lower is better)
Translates to: LQMFCGQRGHTI*GQSAQKFLGQP
Trigger: TGGCTGACCCAGGAACTTCTGAGCAGACTGACCTCAGATTGTATGGCCTCGTTGACCACAAAACATCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS CCA 72 bp CTATGCCCATTTTGTTCAGCTACTCCGTTGGTAGCTTaGCTAAATATGCTGGATTCAGCCTGGCTAGGCACT +
Preference number: 6 (lower is better)
Translates to: LCPFCSATPLVA*LNMLDSAWLGT
Trigger: AGTGCCTAGCCAGGCTGAATCCAGCATATTTAGCCAAGCTACCAACGGAGTAGCTGAACAAAATGGGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CAA 72 bp ACTATGCCCATTTTGTTCAGCTACTCCGTTGGTAGCTaGGCTAAATATGCTGGATTCAGCCTGGCTAGGCAC +
Preference number: 6 (lower is better)
Translates to: TMPILFSYSVGS*AKYAGFSLARH
Trigger: GTGCCTAGCCAGGCTGAATCCAGCATATTTAGCCAAGCTACCAACGGAGTAGCTGAACAAAATGGGCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CAA 72 bp CCAGGTGTACTATGCCCATTTTGTTCAGCTACTCCGTaGGTAGCTTGGCTAAATATGCTGGATTCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: PGVLCPFCSATP*VAWLNMLDSAW
Trigger: CCAGGCTGAATCCAGCATATTTAGCCAAGCTACCAACGGAGTAGCTGAACAAAATGGGCATAGTACACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CAA 90 bp GTCAGTCTGGTCAGATTCAGTGTAGTGAGCATTGTCAACTGGAGGTaGATCAGCATTACTATGAGCTTGGTCAATAGCCTGGTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: VSLVRFSVVSIVNWR*ISITMSLVNSLVFS
Trigger: GCTGAACACCAGGCTATTGACCAAGCTCATAGTAATGCTGATCAACCTCCAGTTGACAATGCTCACTACACTGAATCTGACCAGACTGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS TCA 72 bp TGTTCAGCAGTTCTTTCCTCCGTCAGGCCAGACACCTaGCCATCACTCTGTTCATGCTGTACATTATTAGCT +
Preference number: 6 (lower is better)
Translates to: CSAVLSSVRPDT*PSLCSCCTLLA
Trigger: AGCTAATAATGTACAGCATGAACAGAGTGATGGTCAGGTGTCTGGCCTGACGGAGGAAAGAACTGCTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS GCA 72 bp GTACTCTGTAGTCAGCCTCTTTGTCCTCTTTGCTGTTaGCTAACTGGGGAAATATTCTGTCTTCAGACTGGC +
Preference number: 6 (lower is better)
Translates to: VLCSQPLCPLCC*LTGEIFCLQTG
Trigger: GCCAGTCTGAAGACAGAATATTTCCCCAGTTAGGCAACAGCAAAGAGGACAAAGAGGCTGACTACAGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS CAA 90 bp GCCAGACACCTGACCATCACTCTGTTCATGCTGTACATTATTAGCTaGGCTAGATGCCTTGCCTTTAGTCTGTTCAGACGGTGTTTGATT +
Preference number: 6 (lower is better)
Translates to: ARHLTITLFMLYIIS*ARCLAFSLFRRCLI
Trigger: AATCAAACACCGTCTGAACAGACTAAAGGCAAGGCATCTAGCCAAGCTAATAATGTACAGCATGAACAGAGTGATGGTCAGGTGTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS GCA 72 bp AGTCTGTTCAGACGGTGTTTGATTAACCTGATCATCTaGTCTAAGGTCAGAAACATCAGCAGGGTTGGATGC +
Preference number: 6 (lower is better)
Translates to: SLFRRCLINLII*SKVRNISRVGC
Trigger: GCATCCAACCCTGCTGATGTTTCTGACCTTAGAGCAGATGATCAGGTTAATCAAACACCGTCTGAACAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CCA 72 bp GTTACTGGTGAATCTGGCATCAACTGGGTTGTAGGGTaGGATAGTGGTTGCATTCTGAGTTTCCATTTCAAC +
Preference number: 6 (lower is better)
Translates to: VTGESGINWVVG*DSGCILSFHFN
Trigger: GTTGAAATGGAAACTCAGAATGCAACCACTATCCCACCCTACAACCCAGTTGATGCCAGATTCACCAGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS CCA 72 bp TTTTGCTTGGAAGTTACTGGTGAATCTGGCATCAACTaGGTTGTAGGGTGGGATAGTGGTTGCATTCTGAGT +
Preference number: 6 (lower is better)
Translates to: FCLEVTGESGIN*VVGWDSGCILS
Trigger: ACTCAGAATGCAACCACTATCCCACCCTACAACCCAGTTGATGCCAGATTCACCAGTAACTTCCAAGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS CAA 90 bp ATTAGCTTGGCTAGATGCCTTGCCTTTAGTCTGTTCAGACGGTGTTaGATTAACCTGATCATCTGCTCTAAGGTCAGAAACATCAGCAGG +
Preference number: 6 (lower is better)
Translates to: ISLARCLAFSLFRRC*INLIICSKVRNISR
Trigger: CCTGCTGATGTTTCTGACCTTAGAGCAGATGATCAGGTTAATCAAACACCGTCTGAACAGACTAAAGGCAAGGCATCTAGCCAAGCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS TCA 72 bp TGGGATAGTGGTTGCATTCTGAGTTTCCATTTCAACTaGAGGCTTGGAATTGAGGTCTACTTGGCTATCCTC +
Preference number: 6 (lower is better)
Translates to: WDSGCILSFHFN*RLGIEVYLAIL
Trigger: GAGGATAGCCAAGTAGACCTCAATTCCAAGCCTTCAGTTGAAATGGAAACTCAGAATGCAACCACTATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS GCA 72 bp CTTCTCTCAGATAGTTTGGATAATCTGTGTGTAATCTaGTCAGAAGTTCTTCGCTCAGCCTCGCCAGACATT +
Preference number: 6 (lower is better)
Translates to: LLSDSLDNLCVI*SEVLRSASPDI
Trigger: AATGTCTGGCGAGGCTGAGCGAAGAACTTCTGAGCAGATTACACACAGATTATCCAAACTATCTGAGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CAA 72 bp GCTAGATGCCTTGCCTTTAGTCTGTTCAGACGGTGTTaGATTAACCTGATCATCTGCTCTAAGGTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: ARCLAFSLFRRC*INLIICSKVRN
Trigger: GTTTCTGACCTTAGAGCAGATGATCAGGTTAATCAAACACCGTCTGAACAGACTAAAGGCAAGGCATCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS CAA 72 bp GTCAGATTCAGTGTAGTGAGCATTGTCAACTGGAGGTaGATCAGCATTACTATGAGCTTGGTCAATAGCCTG +
Preference number: 6 (lower is better)
Translates to: VRFSVVSIVNWR*ISITMSLVNSL
Trigger: CAGGCTATTGACCAAGCTCATAGTAATGCTGATCAACCTCCAGTTGACAATGCTCACTACACTGAATCTGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS CCA 72 bp AGTCTGGTCAGATTCAGTGTAGTGAGCATTGTCAACTaGAGGTTGATCAGCATTACTATGAGCTTGGTCAAT +
Preference number: 6 (lower is better)
Translates to: SLVRFSVVSIVN*RLISITMSLVN
Trigger: ATTGACCAAGCTCATAGTAATGCTGATCAACCTCCAGTTGACAATGCTCACTACACTGAATCTGACCAGACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000473121.1
ENST00000492792.1
ENST00000494105.2
CDS GCA 72 bp ACTCTGTTCATGCTGTACATTATTAGCTTGGCTAGATaGCTTGCCTTTAGTCTGTTCAGACGGTGTTTGATT +
Preference number: 6 (lower is better)
Translates to: TLFMLYIISLAR*LAFSLFRRCLI
Trigger: AATCAAACACCGTCTGAACAGACTAAAGGCAAGGCATCTAGCCAAGCTAATAATGTACAGCATGAACAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295622.6
ENST00000460150.1
ENST00000494105.2
CDS TCA 72 bp TATTTGCAGAATGTGGTGTTTTTCCATGTATTGGAGTaGAACTTGGTAAGGATCTTCATAAACTATAGAAGG +
Preference number: 6 (lower is better)
Translates to: YLQNVVFFHVLE*NLVRIFINYRR
Trigger: CCTTCTATAGTTTATGAAGATCCTTACCAAGTTTCACTCCAATACATGGAAAAACACCACATTCTGCAAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295622.6
ENST00000494105.2