Pregenerated sensors for TEX54 (Homo sapiens)
Ensembl gene IDs: ENSG00000283268Ensembl transcript IDs: ENST00000636508.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGTCGCCGCCACAGCACGGTAATCAGAAGGCTTTCGTTCGACTTGTaGTTCGGATGGTCCGGGGAGTTCAAGTCGATATCTTCGGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: SRRHSTVIRRLSFDL*FGWSGEFKSISSAP Trigger: AGGCGCCGAAGATATCGACTTGAACTCCCCGGACCATCCGAATCACAAGTCGAACGAAAGCCTTCTGATTACCGTGCTGTGGCGGCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636508.1 |
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| CDS GCA 90 bp | GTGGTCTCATCTTCCCTGCCGTCCTCAGACTCTTCCTCCTTGGACTaGTCATCAGACATCTCAAAGTCCTTGTCTTGGCAGCAGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VVSSSLPSSDSSSLD*SSDISKSLSWQQPM Trigger: CATGGGCTGCTGCCAAGACAAGGACTTTGAGATGTCTGATGAGCAGTCCAAGGAGGAAGAGTCTGAGGACGGCAGGGAAGATGAGACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636508.1 |
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| CDS CCA 72 bp | AAAGTCCTTGTCTTGGCAGCAGCCCATGGCCCCGCGTaGCCCTGGACTCCGTGCCACCCACGCCAGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KVLVLAAAHGPA*PWTPCHPRQPA Trigger: GGCAGGCTGGCGTGGGTGGCACGGAGTCCAGGGCCACGCGGGGCCATGGGCTGCTGCCAAGACAAGGACTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636508.1 |
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| CDS CAA 90 bp | ACCCCTACCCTCGGGAAGCCCCCTCTCACACTCCCTGGGCCCTCTTaGTGTGTCTGTGGTCTCATCTTCCCTGCCGTCCTCAGACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TPTLGKPPLTLPGPS*CVCGLIFPAVLRLF Trigger: GAAGAGTCTGAGGACGGCAGGGAAGATGAGACCACAGACACACAAAGAGGGCCCAGGGAGTGTGAGAGGGGGCTTCCCGAGGGTAGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636508.1 |
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