Pregenerated sensors for TEX50 (Homo sapiens)
Ensembl gene IDs: ENSG00000232113Ensembl transcript IDs: ENST00000417563.3
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGAGGAAGGATGGTGAGACCTGTGCTCCCAGATCTTGTATATCACTaGTGCTGTGGTTGCCACTCTGTGGAGTGTTTGGTCAATGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: RGRMVRPVLPDLVYH*CCGCHSVECLVNVV Trigger: AACAACATTGACCAAACACTCCACAGAGTGGCAACCACAGCATCAGTGATATACAAGATCTGGGAGCACAGGTCTCACCATCCTTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS TCA 90 bp | CTGATGCTGTGGTTGCCACTCTGTGGAGTGTTTGGTCAATGTTGTTaGTCAATGGGCTTTCTAGATCATTACCAGGTTTTTCTAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LMLWLPLCGVFGQCC*SMGFLDHYQVFLRR Trigger: CCTCCTTAGAAAAACCTGGTAATGATCTAGAAAGCCCATTGATCAACAACATTGACCAAACACTCCACAGAGTGGCAACCACAGCATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CCA 90 bp | TGCTCCCAGATCTTGTATATCACTGATGCTGTGGTTGCCACTCTGTaGAGTGTTTGGTCAATGTTGTTGATCAATGGGCTTTCTAGATCA | + |
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Preference number: 5 (lower is better) Translates to: CSQILYITDAVVATL*SVWSMLLINGLSRS Trigger: TGATCTAGAAAGCCCATTGATCAACAACATTGACCAAACACTCCACAGAGTGGCAACCACAGCATCAGTGATATACAAGATCTGGGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CCA 90 bp | GCAGTGAGATGGAGAACCCTTAACTTTCCAATAATGTACTTCTTCTaGAAGAATCTCCCATCCAACCTTTGTCCAGACAGTTCCATCACA | + |
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Preference number: 5 (lower is better) Translates to: AVRWRTLNFPIMYFF*KNLPSNLCPDSSIT Trigger: TGTGATGGAACTGTCTGGACAAAGGTTGGATGGGAGATTCTTCCAGAAGAAGTACATTATTGGAAAGTTAAGGGTTCTCCATCTCACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CCA 90 bp | ATCTTGTATATCACTGATGCTGTGGTTGCCACTCTGTGGAGTGTTTaGTCAATGTTGTTGATCAATGGGCTTTCTAGATCATTACCAGGT | + |
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Preference number: 5 (lower is better) Translates to: ILYITDAVVATLWSV*SMLLINGLSRSLPG Trigger: ACCTGGTAATGATCTAGAAAGCCCATTGATCAACAACATTGACCAAACACTCCACAGAGTGGCAACCACAGCATCAGTGATATACAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS TCA 90 bp | TTCTTCTTTAATTTGCAGTGCTTAATTTTCTTAGAGGAAGGATGGTaGGACCTGTGCTCCCAGATCTTGTATATCACTGATGCTGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FFFNLQCLIFLEEGW*DLCSQILYITDAVV Trigger: AACCACAGCATCAGTGATATACAAGATCTGGGAGCACAGGTCTCACCATCCTTCCTCTAAGAAAATTAAGCACTGCAAATTAAAGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS TCA 72 bp | ATGGTGAGACCTGTGCTCCCAGATCTTGTATATCACTaGTGCTGTGGTTGCCACTCTGTGGAGTGTTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: MVRPVLPDLVYH*CCGCHSVECLV Trigger: GACCAAACACTCCACAGAGTGGCAACCACAGCATCAGTGATATACAAGATCTGGGAGCACAGGTCTCACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CCA 72 bp | ATCACTGATGCTGTGGTTGCCACTCTGTGGAGTGTTTaGTCAATGTTGTTGATCAATGGGCTTTCTAGATCA | + |
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Preference number: 6 (lower is better) Translates to: ITDAVVATLWSV*SMLLINGLSRS Trigger: TGATCTAGAAAGCCCATTGATCAACAACATTGACCAAACACTCCACAGAGTGGCAACCACAGCATCAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CAA 90 bp | CTTTCCAATAATGTACTTCTTCTGGAAGAATCTCCCATCCAACCTTaGTCCAGACAGTTCCATCACAAATGCAGAAACTCTCCCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LSNNVLLLEESPIQP*SRQFHHKCRNSPRR Trigger: TCTTCGGGGAGAGTTTCTGCATTTGTGATGGAACTGTCTGGACAAAGGTTGGATGGGAGATTCTTCCAGAAGAAGTACATTATTGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CAA 90 bp | ACTGATGCTGTGGTTGCCACTCTGTGGAGTGTTTGGTCAATGTTGTaGATCAATGGGCTTTCTAGATCATTACCAGGTTTTTCTAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TDAVVATLWSVWSML*INGLSRSLPGFSKE Trigger: CTCCTTAGAAAAACCTGGTAATGATCTAGAAAGCCCATTGATCAACAACATTGACCAAACACTCCACAGAGTGGCAACCACAGCATCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CCA 72 bp | ATCTTGTATATCACTGATGCTGTGGTTGCCACTCTGTaGAGTGTTTGGTCAATGTTGTTGATCAATGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ILYITDAVVATL*SVWSMLLINGL Trigger: AAGCCCATTGATCAACAACATTGACCAAACACTCCACAGAGTGGCAACCACAGCATCAGTGATATACAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CAA 90 bp | ATCACTGATGCTGTGGTTGCCACTCTGTGGAGTGTTTGGTCAATGTaGTTGATCAATGGGCTTTCTAGATCATTACCAGGTTTTTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: ITDAVVATLWSVWSM*LINGLSRSLPGFSK Trigger: CTTAGAAAAACCTGGTAATGATCTAGAAAGCCCATTGATCAACAACATTGACCAAACACTCCACAGAGTGGCAACCACAGCATCAGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS TCA 72 bp | TGGTTGCCACTCTGTGGAGTGTTTGGTCAATGTTGTTaGTCAATGGGCTTTCTAGATCATTACCAGGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: WLPLCGVFGQCC*SMGFLDHYQVF Trigger: AAAAACCTGGTAATGATCTAGAAAGCCCATTGATCAACAACATTGACCAAACACTCCACAGAGTGGCAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CCA 72 bp | TGGAGAACCCTTAACTTTCCAATAATGTACTTCTTCTaGAAGAATCTCCCATCCAACCTTTGTCCAGACAGT | + |
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Preference number: 6 (lower is better) Translates to: WRTLNFPIMYFF*KNLPSNLCPDS Trigger: ACTGTCTGGACAAAGGTTGGATGGGAGATTCTTCCAGAAGAAGTACATTATTGGAAAGTTAAGGGTTCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS CAA 72 bp | AATGTACTTCTTCTGGAAGAATCTCCCATCCAACCTTaGTCCAGACAGTTCCATCACAAATGCAGAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: NVLLLEESPIQP*SRQFHHKCRNS Trigger: AGAGTTTCTGCATTTGTGATGGAACTGTCTGGACAAAGGTTGGATGGGAGATTCTTCCAGAAGAAGTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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| CDS TCA 72 bp | AATTTGCAGTGCTTAATTTTCTTAGAGGAAGGATGGTaGGACCTGTGCTCCCAGATCTTGTATATCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: NLQCLIFLEEGW*DLCSQILYITD Trigger: ATCAGTGATATACAAGATCTGGGAGCACAGGTCTCACCATCCTTCCTCTAAGAAAATTAAGCACTGCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417563.3 |
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