Pregenerated sensors for TEX49 (Homo sapiens)
Ensembl gene IDs: ENSG00000257987Ensembl transcript IDs: ENST00000548054.2, ENST00000548380.6
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTGGGAAACGTCTTCAACAACACCTTCCGGACAGCTTCGTGGTATCTTGTGTGGAAGCCTAGTAGGCTCTaGTTCCTTCTGGTCTCGGGC | + |
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Preference number: 2 (lower is better) Translates to: LGNVFNNTFRTASWYLVWKPSRL*FLLVSG Trigger: GCCCGAGACCAGAAGGAACCAGAGCCTACTAGGCTT...CCACACAAGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGACGTTTCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| 3UTR CAA 90 bp | TGGGAAACGTCTTCAACAACACCTTCCGGACAGCTTCGTGGTATCTaGTGTGGCTATTCTGGTGCACGGAATAATTCCCATCTTTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: WETSSTTPSGQLRGI*CGYSGARNNSHLLR Trigger: TCTCAAAAGATGGGAATTATTCCGTGCACCAGAATAGCCACACAAGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGACGTTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR CCA 90 bp | TGGCATGGTTTCCTCTGGACGCACTCCTGGATCATGGGACCACCAGAAGCTGAACGCACTCCTGGATCATaGGACCACCAGAAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: WHGFLWTHSWIMGPPEAERTPGS*DHQKLK Trigger: CTTCAGCTTCTGGTGGTCCCATGATCCAGGAGTGCG...TTCAGCTTCTGGTGGTCCCATGATCCAGGAGTGCGTCCAGAGGAAACCATGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR TCA 90 bp | GGCATGGTTTCCTCTGGACGCACTCCTGGATCATGGGACCACCAGAAGCTGAAGCAGTCAAGGGGATTCTaGAGACCTGATTGGGAAACG | + |
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Preference number: 4 (lower is better) Translates to: GMVSSGRTPGSWDHQKLKQSRGF*RPDWET Trigger: CGTTTCCCAATCAGGTCTTCAGAATCCCCTTGACTG...CTTCAGCTTCTGGTGGTCCCATGATCCAGGAGTGCGTCCAGAGGAAACCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR TCA 90 bp | TGGCATGGTTTCCTCTGGACGCACTCCTGGATCATGGGACCACCAGAAGCTGAATCATCGCGCTTTTTATaGGACAATGGCGTGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: WHGFLWTHSWIMGPPEAESSRFL*DNGVGS Trigger: GGAGCCCACGCCATTGTCTCATAAAAAGCGCGATGA...TTCAGCTTCTGGTGGTCCCATGATCCAGGAGTGCGTCCAGAGGAAACCATGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR TCA 90 bp | TGGCATGGTTTCCTCTGGACGCACTCCTGGATCATGGGACCACCAGAAGCTGAACAGAAGCTGAAGTTCTaGGCATCAGTCAAGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: WHGFLWTHSWIMGPPEAEQKLKF*ASVKGI Trigger: AATCCCCTTGACTGATGCTCAGAACTTCAGCTTCTG...TTCAGCTTCTGGTGGTCCCATGATCCAGGAGTGCGTCCAGAGGAAACCATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR TCA 90 bp | AGCATCAGTCAAGGGGATTCTGAAGACCTGATTGGGAAACGTCTTCAACAACACCTGGGATTACAGGCGTaGGCTACCATGGAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SISQGDSEDLIGKRLQQHLGLQA*ATMEAR Trigger: CCTGGCCTCCATGGTAGCTCACGCCTGTAATCCCAG...GTGTTGTTGAAGACGTTTCCCAATCAGGTCTTCAGAATCCCCTTGACTGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR CCA 90 bp | TTGGGAAACGTCTTCAACAACACCTTCCGGACAGCTTCGTGGTATCTTGTGTGGCTCTGGACGCACTCCTaGATCATGGGACCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGNVFNNTFRTASWYLVWLWTHS*IMGPPE Trigger: TTCTGGTGGTCCCATGATCCAGGAGTGCGTCCAGAG...CCACACAAGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGACGTTTCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR TCA 90 bp | CGTCTTCAACAACACCTTCCGGACAGCTTCGTGGTATCTTGTGTGGCTATTCTGGGGACCACCAGAAGCTaGAGTTCTGAGCATCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RLQQHLPDSFVVSCVAILGTTRS*SSEHQS Trigger: TGACTGATGCTCAGAACTTCAGCTTCTGGTGGTCCC...CAGAATAGCCACACAAGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR CCA 90 bp | CGTCTTCAACAACACCTTCCGGACAGCTTCGTGGTATCTTGTGTGGCTATTCTGTATGAGACAATGGCGTaGGCTCCGGATCCATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RLQQHLPDSFVVSCVAILYETMA*APDPWH Trigger: ATGCCATGGATCCGGAGCCCACGCCATTGTCTCATA...CAGAATAGCCACACAAGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGACG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR CCA 90 bp | CCACCAGAAGCTGAAGTTCTGAGCATCAGTCAAGGGGATTCTGAAGACCTGATTAAGCCTAGTAGGCTCTaGTTCCTTCTGGTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPEAEVLSISQGDSEDLIKPSRL*FLLVSG Trigger: GCCCGAGACCAGAAGGAACCAGAGCCTACTAGGCTT...AATCAGGTCTTCAGAATCCCCTTGACTGATGCTCAGAACTTCAGCTTCTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR CCA 90 bp | GACCTGATTGGGAAACGTCTTCAACAACACCTTCCGGACAGCTTCGTGGTATCTTCGTGGTATCTTGTGTaGCTATTCTGGTGCACGGAA | + |
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Preference number: 4 (lower is better) Translates to: DLIGKRLQQHLPDSFVVSSWYLV*LFWCTE Trigger: TTCCGTGCACCAGAATAGCCACACAAGATACCACGA...AGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGACGTTTCCCAATCAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR CCA 90 bp | GACCTGATTGGGAAACGTCTTCAACAACACCTTCCGGACAGCTTCGTGGTATCTTTCCGGACAGCTTCGTaGTATCTTGTGTGGCTATTC | + |
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Preference number: 4 (lower is better) Translates to: DLIGKRLQQHLPDSFVVSFRTAS*YLVWLF Trigger: GAATAGCCACACAAGATACCACGAAGCTGTCCGGAA...AGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGACGTTTCCCAATCAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR CCA 90 bp | AGCATCAGTCAAGGGGATTCTGAAGACCTGATTGGGAAACGTCTTCAACAACACTGGCATGGTTTCCTCTaGACGCACTCCTGGATCATG | + |
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Preference number: 4 (lower is better) Translates to: SISQGDSEDLIGKRLQQHWHGFL*THSWIM Trigger: CATGATCCAGGAGTGCGTCCAGAGGAAACCATGCCA...GTGTTGTTGAAGACGTTTCCCAATCAGGTCTTCAGAATCCCCTTGACTGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR TCA 90 bp | CCACCAGAAGCTGAAGTTCTGAGCATCAGTCAAGGGGATTCTGAAGACCTGATTGGGATTCTGAAGACCTaGTTGGGAAACGTCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: PPEAEVLSISQGDSEDLIGILKT*LGNVFN Trigger: GTTGAAGACGTTTCCCAATCAGGTCTTCAGAATCCC...AATCAGGTCTTCAGAATCCCCTTGACTGATGCTCAGAACTTCAGCTTCTGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| 3UTR CAA 72 bp | TCTTCAACAACACCTTCCGGACAGCTTCGTGGTATCTaGTGTGGCTATTCTGGTGCACGGAATAATTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SSTTPSGQLRGI*CGYSGARNNSH Trigger: ATGGGAATTATTCCGTGCACCAGAATAGCCACACAAGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR CAA 90 bp | TGGCATGGTTTCCTCTGGACGCACTCCTGGATCATGGGACCACCAGAAGCTGAACCCAATAGATACAAGTaGAAGAAGGCCATCTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: WHGFLWTHSWIMGPPEAEPNRYK*KKAISD Trigger: ATCTGAGATGGCCTTCTTCAACTTGTATCTATTGGG...TTCAGCTTCTGGTGGTCCCATGATCCAGGAGTGCGTCCAGAGGAAACCATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS-3UTR CAA 90 bp | TTGGGAAACGTCTTCAACAACACCTTCCGGACAGCTTCGTGGTATCTTGTGTGGCAGCTTCGTGGTATCTaGTGTGGCTATTCTGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LGNVFNNTFRTASWYLVWQLRGI*CGYSGA Trigger: TGCACCAGAATAGCCACACAAGATACCACGAAGCTG...CCACACAAGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGACGTTTCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548054.2 |
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| CDS TCA 90 bp | TTTTCTTGTTCTGAAAGGAATTTTGATATCCCAATAGATACAAGTTaGAGAAGGCCATCTCAGATCCTCCCTGGCCTCTTCTGGAACGTC | + |
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Preference number: 5 (lower is better) Translates to: FSCSERNFDIPIDTS*RRPSQILPGLFWNV Trigger: GACGTTCCAGAAGAGGCCAGGGAGGATCTGAGATGGCCTTCTTCAACTTGTATCTATTGGGATATCAAAATTCCTTTCAGAACAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548380.6 |
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