Pregenerated sensors for TEX48 (Homo sapiens)
Ensembl gene IDs: ENSG00000230601Ensembl transcript IDs: ENST00000436752.3, ENST00000612244.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCCTCAAACTCACTGCTaGTGGAGGAAGTGCTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMPQTHC*WRKCSF Trigger: AAAAGAGCACTTCCTCCAGCAGCAGTGAGTTTGAGG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR TCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCTCAGGGCCTCCCAGTaGGGCATGGCTGGAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMLRASQ*GMAGMA Trigger: GGCCATTCCAGCCATGCCTCACTGGGAGGCCCTGAG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCCCAGTTCACTGGGCTaGGCTGTTTCCTGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMPSSLG*AVSCSW Trigger: CCAGCTGCAGGAAACAGCCCAGCCCAGTGAACTGGG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCCAGTGAGGCATGGCTaGAATGGCCAGTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMPVRHG*NGQCSW Trigger: CCAGGAGCACTGGCCATTCCAGCCATGCCTCACTGG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCCTCCCAGTGAGGCATaGCTGGAATGGCCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMPPSEA*LEWPVL Trigger: GAGCACTGGCCATTCCAGCCATGCCTCACTGGGAGG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCCGCCCTCTTCCTCATaGAGATGCCCCAGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMPPSSS*RCPSSC Trigger: ACAGCTGCTGGGGCATCTCCATGAGGAAGAGGGCGG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGGAGGCATGGCTGGAATaGCCAGTGCTCCTGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMEAWLE*PVLLAV Trigger: TACTGCCAGGAGCACTGGCCATTCCAGCCATGCCTC...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR TCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGTTGTGCTCCTGGGTTTaGCTGGGAACCTTGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMLCSWV*LGTLES Trigger: TGACTCCAAGGTTCCCAGTCAAACCCAGGAGCACAA...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGGCTGTTTCCTGCAGCTaGCAGAGTAGACAGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMAVSCS*QSRQKA Trigger: AGCCTTCTGTCTACTCTGCCAGCTGCAGGAAACAGC...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGGGAGTGACTCTTGCTTaGTGGCACAAGGATGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMGVTLA*WHKDGS Trigger: TGAGCCATCCTTGTGCCACCAAGCAAGAGTCACTCC...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGAGGCAGCTCTTCCCATaGTGGCTTTTTAGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMRQLFP*WLFRSW Trigger: CCAGCTCCTAAAAAGCCACCATGGGAAGAGCTGCCT...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCTTTGTCTGCAGGGGTaGCTTGTTGAATCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMLCLQG*LVESAS Trigger: ACTGGCTGATTCAACAAGGCACCCCTGCAGACAAAG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGTCTGCCAGCTTTGTCTaGAGGGGTGCCTTGTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMSASFV*RGALLN Trigger: ATTCAACAAGGCACCCCTGCAGACAAAGCTGGCAGA...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGGTTCTCGAAGGCAAATaGGAGACTGCGTTAATGCGC | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMVLEGK*ETALMR Trigger: GCGCATTAACGCAGTCTCCCATTTGCCTTCGAGAAC...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCAGCTCTTCCCATGGTaGCTTTTTAGGAGCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMQLFPW*LFRSWS Trigger: ACTCCAGCTCCTAAAAAGCCACCATGGGAAGAGCTG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGTTGAAACTTCTACTCTaGCAGCTTTGTCTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMLKLLL*QLCLQG Trigger: CCCCTGCAGACAAAGCTGGCAGAGTAGAAGTTTCAA...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGAGGCAAATGGGAGACTaGGTTAATGCGCTTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMRQMGD*VNALGI Trigger: AATCCCAAGCGCATTAACGCAGTCTCCCATTTGCCT...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCAAATTTTGGGTCGATaGCTTGTGCTCCTGGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMQILGR*LVLLGL Trigger: CAAACCCAGGAGCACAAGCCATCGACCCAAAATTTG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR TCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGTCAAGCTCATCCTTCTaGAGCAGCAAATTTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMSSSSF*SSKFWV Trigger: GACCCAAAATTTGCTGCTTCAGAAGGATGAGCTTGA...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGATCAAGAACTTTAATTaGAGGCAGCTCTTCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMIKNFN*RQLFPW Trigger: CCATGGGAAGAGCTGCCTCCAATTAAAGTTCTTGAT...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGTCTTTGGGAAGCATATaGATTCAGATCCTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMSLGSI*IQILKL Trigger: GAGTTTGAGGATCTGAATGCATATGCTTCCCAAAGA...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS TCA 90 bp | TCGATGGCTTGTGCTCCTGGGTTTGACTGGGAACCTTGGAGTCATTaGTGGCATAGGGCTCCTGACAGTCCCTGCAGCATAAACAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SMACAPGFDWEPWSH*WHRAPDSPCSINRR Trigger: TCTTCTGTTTATGCTGCAGGGACTGTCAGGAGCCCTATGCCATCAATGACTCCAAGGTTCCCAGTCAAACCCAGGAGCACAAGCCATCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436752.3 |
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| CDS TCA 90 bp | TCGATGGCTTGTGCTCCTGGGTTTGACTGGGAACCTTGGAGTCATTaGTGGCATAGGGCTCCTGACAGTCCCCATGGAAAGGAGTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SMACAPGFDWEPWSH*WHRAPDSPHGKELK Trigger: TTTCAACTCCTTTCCATGGGGACTGTCAGGAGCCCTATGCCATCAATGACTCCAAGGTTCCCAGTCAAACCCAGGAGCACAAGCCATCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS GCA 90 bp | AGGGCTCCTGACAGTCCCCATGGAAAGGAGTTGAAACTTCTACTCTaGCAGCTTTGTCTGCAGGGGTGCCTTGTTGAATCAGCCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: RAPDSPHGKELKLLL*QLCLQGCLVESASL Trigger: AAGACTGGCTGATTCAACAAGGCACCCCTGCAGACAAAGCTGGCAGAGTAGAAGTTTCAACTCCTTTCCATGGGGACTGTCAGGAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS GCA 90 bp | CAGGTTTTGGTGGGCTGCCATGGAAAGGAGTTGAAACTTCTACTCTaGCAGCTTTGTCTGCAGGGGTGCCTTGTTGAATCAGCCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: QVLVGCHGKELKLLL*QLCLQGCLVESASL Trigger: AAGACTGGCTGATTCAACAAGGCACCCCTGCAGACAAAGCTGGCAGAGTAGAAGTTTCAACTCCTTTCCATGGCAGCCCACCAAAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436752.3 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGGTCTGCAGGGGTGCCTaGTTGAATCAGCCAGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMVCRGA*LNQPVL Trigger: CAAGACTGGCTGATTCAACAAGGCACCCCTGCAGAC...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGTCTACTCTGCCAGCTTaGTCTGCAGGGGTGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMSTLPA*SAGVPC Trigger: ACAAGGCACCCCTGCAGACAAAGCTGGCAGAGTAGA...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCTTGTGCTCCTGGGTTaGACTGGGAACCTTGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMLVLLG*TGNLGV Trigger: GACTCCAAGGTTCCCAGTCAAACCCAGGAGCACAAG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGTGCAGGGGTGCCTTGTaGAATCAGCCAGTCTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMCRGAL*NQPVLS Trigger: ACTCAAGACTGGCTGATTCAACAAGGCACCCCTGCA...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGCTGAAGCAGCAAATTTaGGGTCGATGGCTTGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMLKQQI*GRWLVL Trigger: GAGCACAAGCCATCGACCCAAAATTTGCTGCTTCAG...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGTTGAATCAGCCAGTCTaGAGTTTGAGCCCAGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMLNQPV*SLSPVH Trigger: GTGAACTGGGCTCAAACTCAAGACTGGCTGATTCAA...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGACTGCGTTAATGCGCTaGGGATTTTGTCTGTCAAGC | + |
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Preference number: 5 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMTALMR*GFCLSS Trigger: GCTTGACAGACAAAATCCCAAGCGCATTAACGCAGT...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGAGGAAGTGCTCTTTTTaGTCTGGATCAGGGGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMRKCSF*SGSGVF Trigger: GAACACCCCTGATCCAGACAAAAAAGAGCACTTCCT...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGTAGCGGTTTAAGTTTCTCTTGTAAAAATTTCTTTGGGAAGCATATGAATGCGCTTGGGATTTaGTCTGTCAAGCTCATCCTT | + |
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Preference number: 5 (lower is better) Translates to: PGSSGLSFSCKNFFGKHMNALGI*SVKLIL Trigger: AAGGATGAGCTTGACAGACAAAATCCCAAGCGCATT...CATATGCTTCCCAAAGAAATTTTTACAAGAGAAACTTAAACCGCTACTGCCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS TCA 72 bp | TGGACCACAACAGCGAGGAGGAGGGAGAAGTTCTGCTaGGCACGATGCCATGCTGGCCACCAGACTGTATAC | + |
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Preference number: 6 (lower is better) Translates to: WTTTARRREKFC*ARCHAGHQTVY Trigger: GTATACAGTCTGGTGGCCAGCATGGCATCGTGCTCAGCAGAACTTCTCCCTCCTCCTCGCTGTTGTGGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436752.3 |
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| CDS TCA 72 bp | TGTGCTCCTGGGTTTGACTGGGAACCTTGGAGTCATTaGTGGCATAGGGCTCCTGACAGTCCCTGCAGCATA | + |
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Preference number: 6 (lower is better) Translates to: CAPGFDWEPWSH*WHRAPDSPCSI Trigger: TATGCTGCAGGGACTGTCAGGAGCCCTATGCCATCAATGACTCCAAGGTTCCCAGTCAAACCCAGGAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436752.3 |
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| CDS TCA 72 bp | TGTGCTCCTGGGTTTGACTGGGAACCTTGGAGTCATTaGTGGCATAGGGCTCCTGACAGTCCCCATGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: CAPGFDWEPWSH*WHRAPDSPHGK Trigger: CTTTCCATGGGGACTGTCAGGAGCCCTATGCCATCAATGACTCCAAGGTTCCCAGTCAAACCCAGGAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS CAA 72 bp | TTTGTCTGCAGGGGTGCCTTGTTGAATCAGCCAGTCTaGAGTTTGAGCCCAGTTCACTGGGCTGGGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: FVCRGALLNQPV*SLSPVHWAGLF Trigger: AAACAGCCCAGCCCAGTGAACTGGGCTCAAACTCAAGACTGGCTGATTCAACAAGGCACCCCTGCAGACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436752.3 ENST00000612244.5 |
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| CDS CAA 90 bp | CTTCTGAAGCAGCAAATTTTGGGTCGATGGCTTGTGCTCCTGGGTTaGACTGGGAACCTTGGAGTCATTGATGGCATAGGGCTCCTGACA | + |
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Preference number: 6 (lower is better) Translates to: LLKQQILGRWLVLLG*TGNLGVIDGIGLLT Trigger: TGTCAGGAGCCCTATGCCATCAATGACTCCAAGGTTCCCAGTCAAACCCAGGAGCACAAGCCATCGACCCAAAATTTGCTGCTTCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436752.3 ENST00000612244.5 |
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| CDS GCA 72 bp | GTGGGCTGCCATGGAAAGGAGTTGAAACTTCTACTCTaGCAGCTTTGTCTGCAGGGGTGCCTTGTTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: VGCHGKELKLLL*QLCLQGCLVES Trigger: TGATTCAACAAGGCACCCCTGCAGACAAAGCTGGCAGAGTAGAAGTTTCAACTCCTTTCCATGGCAGCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436752.3 |
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| CDS GCA 72 bp | CTGGATCAGGGGTGTTCTCGAAGGCAAATGGGAGACTaGGTTAATGCGCTTGGGATTTTGTCTGTCAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LDQGCSRRQMGD*VNALGILSVKL Trigger: GAGCTTGACAGACAAAATCCCAAGCGCATTAACGCAGTCTCCCATTTGCCTTCGAGAACACCCCTGATCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436752.3 ENST00000612244.5 |
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| CDS CAA 72 bp | CAGCAAATTTTGGGTCGATGGCTTGTGCTCCTGGGTTaGACTGGGAACCTTGGAGTCATTGATGGCATAGGG | + |
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Preference number: 6 (lower is better) Translates to: QQILGRWLVLLG*TGNLGVIDGIG Trigger: CCCTATGCCATCAATGACTCCAAGGTTCCCAGTCAAACCCAGGAGCACAAGCCATCGACCCAAAATTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436752.3 ENST00000612244.5 |
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| CDS GCA 72 bp | GACAGTCCCCATGGAAAGGAGTTGAAACTTCTACTCTaGCAGCTTTGTCTGCAGGGGTGCCTTGTTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: DSPHGKELKLLL*QLCLQGCLVES Trigger: TGATTCAACAAGGCACCCCTGCAGACAAAGCTGGCAGAGTAGAAGTTTCAACTCCTTTCCATGGGGACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612244.5 |
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| CDS CAA 90 bp | TGTTCTCGAAGGCAAATGGGAGACTGCGTTAATGCGCTTGGGATTTaGTCTGTCAAGCTCATCCTTCTGAAGCAGCAAATTTTGGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: CSRRQMGDCVNALGI*SVKLILLKQQILGR Trigger: TCGACCCAAAATTTGCTGCTTCAGAAGGATGAGCTTGACAGACAAAATCCCAAGCGCATTAACGCAGTCTCCCATTTGCCTTCGAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436752.3 ENST00000612244.5 |
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