RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEX35 (Homo sapiens)

Ensembl gene IDs: ENSG00000240021

Ensembl transcript IDs: ENST00000319416.7, ENST00000367639.1, ENST00000367641.7, ENST00000367642.3, ENST00000367643.7, ENST00000419909.6, ENST00000442872.1

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGGGGAAGTCACCAGGGAGCCGGAGCCAGGGGTCTGGCACCAGTaGTGGGCTCGGGCAGGGTTTCACTTACGCAGCAGGTCCCACAGT +
Preference number: 1 (lower is better)
Translates to: LGEVTREPEPGVWHQ*WARAGFHLRSRSHS
Trigger: ACTGTGGGACCTGCTGCGTAAGTGAAACCCTGCCCGAGCCCAGCACTGGTGCCAGACCCCTGGCTCCGGCTCCCTGGTGACTTCCCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR CCA 90 bp CAGCACAAGCTCGGGGAAGTCACCAGGGAGCCGGAGCCAGGGGTCTaGCACCAGTGCTGGGCTCGGGCAGGGTTTCACTTACGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: QHKLGEVTREPEPGV*HQCWARAGFHLRSR
Trigger: CCTGCTGCGTAAGTGAAACCCTGCCCGAGCCCAGCACTGGTGCCAGACCCCTGGCTCCGGCTCCCTGGTGACTTCCCCGAGCTTGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR CCA 90 bp GGGGAAGTCACCAGGGAGCCGGAGCCAGGGGTCTGGCACCAGTGCTaGGCTCGGGCAGGGTTTCACTTACGCAGCAGGTCCCACAGTGAT +
Preference number: 1 (lower is better)
Translates to: GEVTREPEPGVWHQC*ARAGFHLRSRSHSD
Trigger: ATCACTGTGGGACCTGCTGCGTAAGTGAAACCCTGCCCGAGCCCAGCACTGGTGCCAGACCCCTGGCTCCGGCTCCCTGGTGACTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR TCA 90 bp GGCGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATaGTACAGCACAAGCTCGGGGAAGTCACCAGGGAGCCGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: GGTQKSAAGGPVPSL*YSTSSGKSPGSRSQ
Trigger: CTGGCTCCGGCTCCCTGGTGACTTCCCCGAGCTTGTGCTGTATCATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR TCA 90 bp CCCTGCATCACCCAAGACACCCTGGCCCCATGCACAGGTGGAGGCTaGTTATGTGGAGGGAGCGGATGGGCCAGGCAGCAGGGTCTCTCC +
Preference number: 1 (lower is better)
Translates to: PCITQDTLAPCTGGG*LCGGSGWARQQGLS
Trigger: GGAGAGACCCTGCTGCCTGGCCCATCCGCTCCCTCCACATAATCAGCCTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTGATGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 90 bp AGGGGTTCCCTGCATCACCCAAGACACCCTGGCCCCATGCACAGGTaGAGGCTGATTATGTGGAGGGAGCGGATGGGCCAGGCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: RGSLHHPRHPGPMHR*RLIMWRERMGQAAG
Trigger: CCCTGCTGCCTGGCCCATCCGCTCCCTCCACATAATCAGCCTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTGATGCAGGGAACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 90 bp CACCCAAGACACCCTGGCCCCATGCACAGGTGGAGGCTGATTATGTaGAGGGAGCGGATGGGCCAGGCAGCAGGGTCTCTCCTGAGACCA +
Preference number: 1 (lower is better)
Translates to: HPRHPGPMHRWRLIM*RERMGQAAGSLLRP
Trigger: TGGTCTCAGGAGAGACCCTGCTGCCTGGCCCATCCGCTCCCTCCACATAATCAGCCTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 90 bp GTAGAGCCTGAGATGCTGCACCTCCCACAAGCTCCCAGACAGTGCTaGTGCTGCCGGGCCGGGGACCACATCGAGAGAAGCCAGAGTGTC +
Preference number: 1 (lower is better)
Translates to: VEPEMLHLPQAPRQC*CCRAGDHIERSQSV
Trigger: GACACTCTGGCTTCTCTCGATGTGGTCCCCGGCCCGGCAGCATCAGCACTGTCTGGGAGCTTGTGGGAGGTGCAGCATCTCAGGCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR GCA 90 bp TCCGCTATCATCAGGGGCCCTCCCCATGCTATGACCTGGGACGTTTaGAGACCCAGGTGGAATGGAGGGAGGTGGTGGTTGGGAGGACCC +
Preference number: 1 (lower is better)
Translates to: SAIIRGPPHAMTWDV*RPRWNGGRWWLGGP
Trigger: GGGTCCTCCCAACCACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAGGTCATAGCATGGGGAGGGCCCCTGATGATAGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 90 bp CACACAGACTGGCGTCCGCTATCATCAGGGGCCCTCCCCATGCTATaGCCTGGGACGTTTGCAGACCCAGGTGGAATGGAGGGAGGTGGT +
Preference number: 1 (lower is better)
Translates to: HTDWRPLSSGALPML*PGTFADPGGMEGGG
Trigger: ACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAGGTCATAGCATGGGGAGGGCCCCTGATGATAGCGGACGCCAGTCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 90 bp AGACTGGCGTCCGCTATCATCAGGGGCCCTCCCCATGCTATGACCTaGGACGTTTGCAGACCCAGGTGGAATGGAGGGAGGTGGTGGTTG +
Preference number: 1 (lower is better)
Translates to: RLASAIIRGPPHAMT*DVCRPRWNGGRWWL
Trigger: CAACCACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAGGTCATAGCATGGGGAGGGCCCCTGATGATAGCGGACGCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 90 bp TCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTaGTCACTGGCTCCTCTCCACCTTTGTAAAGGCCTGAGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: SGTLGQAQRGPQKVG*SLAPLHLCKGLRPL
Trigger: CAGAGGCCTCAGGCCTTTACAAAGGTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 90 bp AAGCTTCACCTTCCCTCAGTCTGGGACTTTGGGGCAGGCACAGCGTaGCCCACAGAAGGTTGGGTGGTCACTGGCTCCTCTCCACCTTTG +
Preference number: 1 (lower is better)
Translates to: KLHLPSVWDFGAGTA*PTEGWVVTGSSPPL
Trigger: CAAAGGTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTGAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 90 bp GCTAACAGTCCCTACTCCTGGCACAACCTCAGGAGGGGTGTGATGTaGATGCGGCTGGGAGCACATGGCCTTGGGGACAACAAGGCACCT +
Preference number: 1 (lower is better)
Translates to: ANSPYSWHNLRRGVM*MRLGAHGLGDNKAP
Trigger: AGGTGCCTTGTTGTCCCCAAGGCCATGTGCTCCCAGCCGCATTCACATCACACCCCTCCTGAGGTTGTGCCAGGAGTAGGGACTGTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 90 bp AGCTACCCAGTTCCTATGAGCAGCAGGGACCTGAGTCCTGCTTGGTaGCAAGACCTCAGAGGGGTGTGGTGCAGGCAGAACTCGAGGCTG +
Preference number: 1 (lower is better)
Translates to: SYPVPMSSRDLSPAW*QDLRGVWCRQNSRL
Trigger: CAGCCTCGAGTTCTGCCTGCACCACACCCCTCTGAGGTCTTGTCACCAAGCAGGACTCAGGTCCCTGCTGCTCATAGGAACTGGGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 90 bp CATCTGCTAACAGTCCCTACTCCTGGCACAACCTCAGGAGGGGTGTaGTGTGAATGCGGCTGGGAGCACATGGCCTTGGGGACAACAAGG +
Preference number: 1 (lower is better)
Translates to: HLLTVPTPGTTSGGV*CECGWEHMALGTTR
Trigger: CCTTGTTGTCCCCAAGGCCATGTGCTCCCAGCCGCATTCACATCACACCCCTCCTGAGGTTGTGCCAGGAGTAGGGACTGTTAGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR GCA 90 bp CCAAGAAAGCTACCCAGTTCCTATGAGCAGCAGGGACCTGAGTCCTaGTTGGTGACAAGACCTCAGAGGGGTGTGGTGCAGGCAGAACTC +
Preference number: 1 (lower is better)
Translates to: PRKLPSSYEQQGPES*LVTRPQRGVVQAEL
Trigger: GAGTTCTGCCTGCACCACACCCCTCTGAGGTCTTGTCACCAAGCAGGACTCAGGTCCCTGCTGCTCATAGGAACTGGGTAGCTTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 90 bp GTCCTCCTTCCTGGTGCCACATCCTGTATGACTGAGCATGCTGGGTaGCAGCATCTGCTAACAGTCCCTACTCCTGGCACAACCTCAGGA +
Preference number: 1 (lower is better)
Translates to: VLLPGATSCMTEHAG*QHLLTVPTPGTTSG
Trigger: TCCTGAGGTTGTGCCAGGAGTAGGGACTGTTAGCAGATGCTGCCACCCAGCATGCTCAGTCATACAGGATGTGGCACCAGGAAGGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 90 bp CAGAAGGCAGCTCCAGAAGCCAAGGGTGAAAAGGGTGCCCAGACCTaGTGTGAATATTTCCCACTGGATGGGGAGAAAGGGCAGGACCTG +
Preference number: 1 (lower is better)
Translates to: QKAAPEAKGEKGAQT*CEYFPLDGEKGQDL
Trigger: CAGGTCCTGCCCTTTCTCCCCATCCAGTGGGAAATATTCACACCAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGAGCTGCCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 90 bp TTATCTGCCCTTGCTAAAGGGAAGGACAGAATAAGAGGGTGGAGCTaGCGGGTAGGCCCATCCAGGGTCAAGTCCTGCATGGTCACAGCT +
Preference number: 1 (lower is better)
Translates to: LSALAKGKDRIRGWS*RVGPSRVKSCMVTA
Trigger: AGCTGTGACCATGCAGGACTTGACCCTGGATGGGCCTACCCGCCAGCTCCACCCTCTTATTCTGTCCTTCCCTTTAGCAAGGGCAGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 90 bp TACTCTCATTTCAAGCTGGCAGTTAAGCTTCACCTTCCCTCAGTCTaGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTG +
Preference number: 1 (lower is better)
Translates to: YSHFKLAVKLHLPSV*DFGAGTAWPTEGWV
Trigger: CACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTGAAGCTTAACTGCCAGCTTGAAATGAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 90 bp TCACTTGAGCTCACAAGGGGTTGGAGACCGGCCAAGGCAACGTGGTaGGATCTCCGCCTCATGATGGGATTGAAACCCAGCTTCTTTTTC +
Preference number: 1 (lower is better)
Translates to: SLELTRGWRPAKATW*DLRLMMGLKPSFFF
Trigger: GAAAAAGAAGCTGGGTTTCAATCCCATCATGAGGCGGAGATCTCACCACGTTGCCTTGGCCGGTCTCCAACCCCTTGTGAGCTCAAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR CCA 90 bp TCCATTGACTCCACTGGCTCCATCCATTTTCTTGGGCCTGAGCTGTaGTTCTCTGTGAGTCTTTCCCATCAGCCTGAGTTCCTGCTGCTC +
Preference number: 1 (lower is better)
Translates to: SIDSTGSIHFLGPEL*FSVSLSHQPEFLLL
Trigger: GAGCAGCAGGAACTCAGGCTGATGGGAAAGACTCACAGAGAACCACAGCTCAGGCCCAAGAAAATGGATGGAGCCAGTGGAGTCAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367642.3
ENST00000419909.6
3UTR CCA 90 bp TCTCCTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTaGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCCCTTGCT +
Preference number: 1 (lower is better)
Translates to: SPAEDRNGTRKINFP*SKKGSLLGTLSALA
Trigger: AGCAAGGGCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 90 bp GGGATTGAATGGGCCAAGACATACCCAGGCTGCCTTGAACATGTGTaGGGCCTGGAACAAGAGATCCAACAGAAGCCCACATTCCTTATG +
Preference number: 1 (lower is better)
Translates to: GIEWAKTYPGCLEHV*GLEQEIQQKPTFLM
Trigger: CATAAGGAATGTGGGCTTCTGTTGGATCTCTTGTTCCAGGCCTCACACATGTTCAAGGCAGCCTGGGTATGTCTTGGCCCATTCAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR CCA 90 bp GGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTaGAAACACATATTCGATGTCACCGGGGTTGAGGTACAGATAAAT +
Preference number: 1 (lower is better)
Translates to: GDESELLVGSAAALG*KHIFDVTGVEVQIN
Trigger: ATTTATCTGTACCTCAACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR GCA 90 bp TGTTACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTaGAGAAGGGTCAATAGAATTGGCTGTCAGGAGGTGACGAGCTTC +
Preference number: 1 (lower is better)
Translates to: CYQGQKQELNQKNKS*RRVNRIGCQEVTSF
Trigger: GAAGCTCGTCACCTCCTGACAGCCAATTCTATTGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR GCA 90 bp GAAACAGGTTCTGAAGTCAGAATGCTAGGATTCGAATTTCAGCTCTaGCACGTATCCTGTGACCTCAGACAGATTATGCTCATTACCTTC +
Preference number: 1 (lower is better)
Translates to: ETGSEVRMLGFEFQL*HVSCDLRQIMLITF
Trigger: GAAGGTAATGAGCATAATCTGTCTGAGGTCACAGGATACGTGGCAGAGCTGAAATTCGAATCCTAGCATTCTGACTTCAGAACCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CCA 90 bp CCCTGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCCCTTGCTAAAGGGCCGGAGCCAGGGGTCTaGCACCAGTGCTGGGCTCGG +
Preference number: 2 (lower is better)
Translates to: PWSKKGSLLGTLSALAKGPEPGV*HQCWAR
Trigger: CCGAGCCCAGCACTGGTGCCAGACCCCTGGCTCCGG...CCCTTTAGCAAGGGCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR-3UTR CCA 90 bp CAAGACCTCAGAGGGGTGTGGTGCAGGCAGAACTCGAGGCTGAGGGGTTCCCTGGTCTGGCACCAGTGCTaGGCTCGGGCAGGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: QDLRGVWCRQNSRLRGSLVWHQC*ARAGFH
Trigger: GTGAAACCCTGCCCGAGCCCAGCACTGGTGCCAGAC...CAGGGAACCCCTCAGCCTCGAGTTCTGCCTGCACCACACCCCTCTGAGGTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR CAA 90 bp GTCCGCTATCATCAGGGGCCCTCCCCATGCTATGACCTGGGACGTTaGCAGACCCAGGTGGAATGGAGGGAGGTGGTGGTTGGGAGGACC +
Preference number: 2 (lower is better)
Translates to: VRYHQGPSPCYDLGR*QTQVEWREVVVGRT
Trigger: GGTCCTCCCAACCACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAGGTCATAGCATGGGGAGGGCCCCTGATGATAGCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR GCA 90 bp AGGCTCGGGCGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGGTGAAGAGCACAGGGTaGTCCATTGACTCCACTGGC +
Preference number: 2 (lower is better)
Translates to: RLGRHPEVSSGRTCPFTMVKSTG*SIDSTG
Trigger: GCCAGTGGAGTCAATGGAGCACCCTGTGCTCTTCAC...CATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCGCCCGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR-3UTR CCA 90 bp TTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACTGGCTCCTCTCGACAGAATAAGAGGGTaGAGCTGGCGGGTAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LGQAQRGPQKVGWSLAPLDRIRG*SWRVGP
Trigger: TGGGCCTACCCGCCAGCTCCACCCTCTTATTCTGTC...GAGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp CTGGGACGTTTGCAGACCCAGGTGGAATGGAGGGAGGTGGTGGTTGGGAGGACCAGGAGGGGTGTGATGTaGATGCGGCTGGGAGCACAT +
Preference number: 2 (lower is better)
Translates to: LGRLQTQVEWREVVVGRTRRGVM*MRLGAH
Trigger: ATGTGCTCCCAGCCGCATTCACATCACACCCCTCCT...GGTCCTCCCAACCACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp GTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACTGTGCCACATCCTGTATaGCTGAGCATGCTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: VWDFGAGTAWPTEGWVVTVPHPV*LSMLGG
Trigger: GCCACCCAGCATGCTCAGTCATACAGGATGTGGCAC...AGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp GTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACTTCCAGAAGCCAAGGGTaGAAAGGGTGCCCAGACCTG +
Preference number: 2 (lower is better)
Translates to: VWDFGAGTAWPTEGWVVTSRSQG*KGCPDL
Trigger: CAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGA...AGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR CCA 90 bp GAGCCCCAGGCAGCAGCCTCTAGGCTGGGTGACCCAAGTCCTCCTTCCTGGTGCACTGAGCATGCTGGGTaGCAGCATCTGCTAACAGTC +
Preference number: 2 (lower is better)
Translates to: EPQAAASRLGDPSPPSWCTEHAG*QHLLTV
Trigger: GACTGTTAGCAGATGCTGCCACCCAGCATGCTCAGT...GCACCAGGAAGGAGGACTTGGGTCACCCAGCCTAGAGGCTGCTGCCTGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR GCA 90 bp TTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACTGGCTCCTCTCATGACCTGGGACGTTTaGAGACCCAGGTGGAATGGA +
Preference number: 2 (lower is better)
Translates to: LGQAQRGPQKVGWSLAPLMTWDV*RPRWNG
Trigger: TCCATTCCACCTGGGTCTGCAAACGTCCCAGGTCAT...GAGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp GGCCACCTCAAAACGGTGCTTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGTCTTTCCCATCAGCCTaGGTTCCTGCTGCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: GHLKTVLASLRGCRSLLESFPSA*VPAAPL
Trigger: CAAAGGAGCAGCAGGAACTCAGGCTGATGGGAAAGA...CTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR TCA 90 bp GTGTGGTGCAGGCAGAACTCGAGGCTGAGGGGTTCCCTGCATCACCCAAGACACCCTGTCCCTTCACTATaGTACAGCACAAGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: VWCRQNSRLRGSLHHPRHPVPSL*YSTSSG
Trigger: CCCCGAGCTTGTGCTGTATCATAGTGAAGGGACAGG...GTGTCTTGGGTGATGCAGGGAACCCCTCAGCCTCGAGTTCTGCCTGCACCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp CCGAGGTGGGAGGATCACTTGAGCTCACAAGGGGTTGGAGACCGGCCAAGGCAATTGGCTGTCAGGAGGTaGCGAGCTTCCTTTAGGGGA +
Preference number: 2 (lower is better)
Translates to: PRWEDHLSSQGVGDRPRQLAVRR*RASFRG
Trigger: TCCCCTAAAGGAAGCTCGTCACCTCCTGACAGCCAA...TTGCCTTGGCCGGTCTCCAACCCCTTGTGAGCTCAAGTGATCCTCCCACCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR GCA 90 bp GTGGAGGGAGCGGATGGGCCAGGCAGCAGGGTCTCTCCTGAGACCACACAGACTGGTAGGTTCTGCAGCTaGGCTAGGTTGGAAACACAT +
Preference number: 2 (lower is better)
Translates to: VEGADGPGSRVSPETTQTGRFCS*ARLETH
Trigger: ATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACC...AGTCTGTGTGGTCTCAGGAGAGACCCTGCTGCCTGGCCCATCCGCTCCCTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR CCA 90 bp GGCCACCTCAAAACGGTGCTTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCTTGGGCCTGAGCTGTaGTTCTCTGTGAGTCTTTCC +
Preference number: 2 (lower is better)
Translates to: GHLKTVLASLRGCRSLLELGPEL*FSVSLS
Trigger: GGAAAGACTCACAGAGAACCACAGCTCAGGCCCAAG...CTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CCA 90 bp GCTCCTCTCCACCTTTGTAAAGGCCTGAGGCCTCTGAAGGAATGTTCCCTTTGGTGTGGAGGGAGCGGATaGGCCAGGCAGCAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: APLHLCKGLRPLKECSLWCGGSG*ARQQGL
Trigger: GAGACCCTGCTGCCTGGCCCATCCGCTCCCTCCACA...CCAAAGGGAACATTCCTTCAGAGGCCTCAGGCCTTTACAAAGGTGGAGAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp AGCGTGGCCCACAGAAGGTTGGGTGGTCACTGGCTCCTCTCCACCTTTGTAAAGCACAGGGTGCTCCATTaGCTCCACTGGCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: SVAHRRLGGHWLLSTFVKHRVLH*LHWLHP
Trigger: TGGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTG...CTTTACAAAGGTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR-3UTR TCA 90 bp GGCCACCTCAAAACGGTGCTTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCTGCCACGTATCCTGTaGCCTCAGACAGATTATGCT +
Preference number: 2 (lower is better)
Translates to: GHLKTVLASLRGCRSLLELPRIL*PQTDYA
Trigger: AGCATAATCTGTCTGAGGTCACAGGATACGTGGCAG...CTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CCA 90 bp GTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGCTACCCAGTTCCTATGAGCAGGCGGCTGGGAGCACATaGCCTTGGGGACAACAAGGC +
Preference number: 2 (lower is better)
Translates to: VRRVDPQNPRKLPSSYEQAAGST*PWGQQG
Trigger: GCCTTGTTGTCCCCAAGGCCATGTGCTCCCAGCCGC...CTGCTCATAGGAACTGGGTAGCTTTCTTGGGTTCTGGGGATCCACCCTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR CCA 90 bp CTCAGAGGGGTGTGGTGCAGGCAGAACTCGAGGCTGAGGGGTTCCCTGCATCACGGCCTGGGGTTGGGGTaGTATTTAACAGGACAAGAA +
Preference number: 2 (lower is better)
Translates to: LRGVWCRQNSRLRGSLHHGLGLG*YLTGQE
Trigger: TTCTTGTCCTGTTAAATACCACCCCAACCCCAGGCC...GTGATGCAGGGAACCCCTCAGCCTCGAGTTCTGCCTGCACCACACCCCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CAA 90 bp AGAAAGCTACCCAGTTCCTATGAGCAGCAGGGACCTGAGTCCTGCTaGGTGACAAGACCTCAGAGGGGTGTGGTGCAGGCAGAACTCGAG +
Preference number: 2 (lower is better)
Translates to: RKLPSSYEQQGPESC*VTRPQRGVVQAELE
Trigger: CTCGAGTTCTGCCTGCACCACACCCCTCTGAGGTCTTGTCACCAAGCAGGACTCAGGTCCCTGCTGCTCATAGGAACTGGGTAGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp CACCCAAGACACCCTGGCCCCATGCACAGGTGGAGGCTGATTATGTGGAGGGAGGGACAACAAGGCACCTaGTCGAGAAAAGGCACATCT +
Preference number: 2 (lower is better)
Translates to: HPRHPGPMHRWRLIMWREGQQGT*SRKGTS
Trigger: AGATGTGCCTTTTCTCGATCAGGTGCCTTGTTGTCC...CTCCCTCCACATAATCAGCCTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR CCA 90 bp AGAAAGCTACCCAGTTCCTATGAGCAGCAGGGACCTGAGTCCTGCTTGGTGACAATAAGAGGGTGGAGCTaGCGGGTAGGCCCATCCAGG +
Preference number: 2 (lower is better)
Translates to: RKLPSSYEQQGPESCLVTIRGWS*RVGPSR
Trigger: CCTGGATGGGCCTACCCGCCAGCTCCACCCTCTTAT...TGTCACCAAGCAGGACTCAGGTCCCTGCTGCTCATAGGAACTGGGTAGCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp GGGGTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGCTACCCAGTTCCTATGAGCCTGTCCCTTCACTATaGTACAGCACAAGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: GVRRVDPQNPRKLPSSYEPVPSL*YSTSSG
Trigger: CCCCGAGCTTGTGCTGTATCATAGTGAAGGGACAGG...CTCATAGGAACTGGGTAGCTTTCTTGGGTTCTGGGGATCCACCCTTCTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp GGGGTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGCTACCCAGTTCCTATGAGTCTTTCCCATCAGCCTaGGTTCCTGCTGCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: GVRRVDPQNPRKLPSSYESFPSA*VPAAPL
Trigger: CAAAGGAGCAGCAGGAACTCAGGCTGATGGGAAAGA...CTCATAGGAACTGGGTAGCTTTCTTGGGTTCTGGGGATCCACCCTTCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR-3UTR GCA 90 bp CAAGTCCTCCTTCCTGGTGCCACATCCTGTATGACTGAGCATGCTGGGTGGCAGATCAGCCTGAGTTCCTaGTGCTCCTTTGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: QVLLPGATSCMTEHAGWQISLSS*CSFGAL
Trigger: AAGAGCACCAAAGGAGCAGCAGGAACTCAGGCTGAT...CTGCCACCCAGCATGCTCAGTCATACAGGATGTGGCACCAGGAAGGAGGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR-3UTR GCA 90 bp GGAGAGGAAACCTTCAAGGGGGTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGTCCAGGGTCAAGTCCTaGATGGTCACAGCTAAGGAG +
Preference number: 2 (lower is better)
Translates to: GEETFKGVRRVDPQNPRKSRVKS*MVTAKE
Trigger: CTCCTTAGCTGTGACCATGCAGGACTTGACCCTGGA...CTTTCTTGGGTTCTGGGGATCCACCCTTCTCACCCCCTTGAAGGTTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CAA 90 bp CAGGGCTTTGAGGGATTGAATGGGCCAAGACATACCCAGGCTGCCTaGAACATGTGTGAGGCCTGGAACAAGAGATCCAACAGAAGCCCA +
Preference number: 2 (lower is better)
Translates to: QGFEGLNGPRHTQAA*NMCEAWNKRSNRSP
Trigger: TGGGCTTCTGTTGGATCTCTTGTTCCAGGCCTCACACATGTTCAAGGCAGCCTGGGTATGTCTTGGCCCATTCAATCCCTCAAAGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CCA 90 bp CTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGGTGAATATTTCCCACTaGATGGGGAGAAAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LGGDESELLVGSAAALGWVNISH*MGRKGR
Trigger: CCTGCCCTTTCTCCCCATCCAGTGGGAAATATTCAC...CCAACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp CTTTGTAAAGGCCTGAGGCCTCTGAAGGAATGTTCCCTTTGGGGGTGGAGGGAGCCTCGTCCTTCAAATTaGAGCCAAAGAATCACACCC +
Preference number: 2 (lower is better)
Translates to: LCKGLRPLKECSLWGWREPRPSN*SQRITP
Trigger: GGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGG...CTCCCTCCACCCCCAAAGGGAACATTCCTTCAGAGGCCTCAGGCCTTTACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp ACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCACACAGGGTGCTCCATTaGCTCCACTGGCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: TRVKSRNSIRRTRAAEGSHRVLH*LHWLHP
Trigger: TGGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTG...TGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR TCA 90 bp CACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACACCTCAGGAGGGGTGTaGTGTGAATGCGGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: HTQGRTVSETLFALYLLYTSGGV*CECGWE
Trigger: CTCCCAGCCGCATTCACATCACACCCCTCCTGAGGT...GTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp GGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTCCTCGTCCTTCAAATTaGAGCCAAAGAATCACACCC +
Preference number: 2 (lower is better)
Translates to: GRFCSCARLETHIRCHRGPRPSN*SQRITP
Trigger: GGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGG...ACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp CTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTGGTCCAAGAAGGAGCTGTGGTTCTCTGTaGGTCTTTCCCATCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LQRTETAQERSISPGPRRSCGSL*VFPISL
Trigger: CAGGCTGATGGGAAAGACTCACAGAGAACCACAGCT...CCTTCTTGGACCAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR-3UTR TCA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATAGCTGTGGTTCTCTGTaGGTCTTTCCCATCAGCCTG +
Preference number: 2 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNSCGSL*VFPISL
Trigger: CAGGCTGATGGGAAAGACTCACAGAGAACCACAGCT...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR GCA 90 bp ACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCAGTGAAGAGCACAGGGTaGTCCATTGACTCCACTGGC +
Preference number: 2 (lower is better)
Translates to: TRVKSRNSIRRTRAAEGSVKSTG*SIDSTG
Trigger: GCCAGTGGAGTCAATGGAGCACCCTGTGCTCTTCAC...TGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CCA 90 bp GGGGTTGAGGTACAGATAAATCAGAAGGCAGCTCCAGAAGCCAAGGGTGAAAAGGGAGGGGCAGAGAGTTaGGGAGACATTTTGCAGCAT +
Preference number: 2 (lower is better)
Translates to: GVEVQINQKAAPEAKGEKGGAES*GDILQH
Trigger: ATGCTGCAAAATGTCTCCCCAACTCTCTGCCCCTCC...CTTTTCACCCTTGGCTTCTGGAGCTGCCTTCTGATTTATCTGTACCTCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR-3UTR CCA 90 bp CTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTGGTCCAAGAAGGCTTGGGCCTGAGCTGTaGTTCTCTGTGAGTCTTTCC +
Preference number: 2 (lower is better)
Translates to: LQRTETAQERSISPGPRRLGPEL*FSVSLS
Trigger: GGAAAGACTCACAGAGAACCACAGCTCAGGCCCAAG...CCTTCTTGGACCAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR-3UTR CCA 90 bp CACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACCACCTTCCCTCAGTCTaGGACTTTGGGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: HTQGRTVSETLFALYLLYHLPSV*DFGAGT
Trigger: TGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTG...GTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp AGGCAGCTCCAGAAGCCAAGGGTGAAAAGGGTGCCCAGACCTGGTGTGAATATTAGCTTAGCAAAGAGATaGAACAAGGAGGAACTGGTG +
Preference number: 2 (lower is better)
Translates to: RQLQKPRVKRVPRPGVNISLAKR*NKEELV
Trigger: CACCAGTTCCTCCTTGTTTCATCTCTTTGCTAAGCT...AATATTCACACCAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGAGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp AGAAAGCTACCCAGTTCCTATGAGCAGCAGGGACCTGAGTCCTGCTTGGTGACAAAGGCACATCTTGTATaGATCTACCTACCCCGATTG +
Preference number: 2 (lower is better)
Translates to: RKLPSSYEQQGPESCLVTKAHLV*IYLPRL
Trigger: CAATCGGGGTAGGTAGATTCATACAAGATGTGCCTT...TGTCACCAAGCAGGACTCAGGTCCCTGCTGCTCATAGGAACTGGGTAGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CAA 90 bp CACATAGGTGACAGCAAGATGAGAATTAAACAGGGCTTTGAGGGATaGAATGGGCCAAGACATACCCAGGCTGCCTTGAACATGTGTGAG +
Preference number: 2 (lower is better)
Translates to: HIGDSKMRIKQGFEG*NGPRHTQAALNMCE
Trigger: CTCACACATGTTCAAGGCAGCCTGGGTATGTCTTGGCCCATTCAATCCCTCAAAGCCCTGTTTAATTCTCATCTTGCTGTCACCTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR GCA 90 bp CAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCAATATCAGCCTGAGTTCCTaGTGCTCCTTTGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: QGQKQELNQKNKSCRRVNISLSS*CSFGAL
Trigger: AAGAGCACCAAAGGAGCAGCAGGAACTCAGGCTGAT...ATTGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CCA 90 bp CCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCAAGGGTGCCCAGACCTaGTGTGAATATTTCCCACTG +
Preference number: 2 (lower is better)
Translates to: PRAGQFLKHCLLCIFFTLKGAQT*CEYFPL
Trigger: CAGTGGGAAATATTCACACCAGGTCTGGGCACCCTT...GAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp CTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGTTAAGCTTCACGGACAACAAGGCACCTaGTCGAGAAAAGGCACATCT +
Preference number: 2 (lower is better)
Translates to: LFALYLLYSHFKLAVKLHGQQGT*SRKGTS
Trigger: AGATGTGCCTTTTCTCGATCAGGTGCCTTGTTGTCC...GTGAAGCTTAACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR TCA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATTCATTACCTTCTCTCTaGGTTTATTTCATCCCTCAT +
Preference number: 2 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNSLPSL*VYFIPH
Trigger: ATGAGGGATGAAATAAACTCAGAGAGAAGGTAATGA...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CCA 90 bp TCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGTTCCAAGTCCTCCTTCCTaGTGCCACATCCTGTATGAC +
Preference number: 2 (lower is better)
Translates to: SETLFALYLLYSHFKLAVPSPPS*CHILYD
Trigger: GTCATACAGGATGTGGCACCAGGAAGGAGGACTTGG...AACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR CCA 90 bp TCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGTTGTGAATATTTCCCACTaGATGGGGAGAAAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SETLFALYLLYSHFKLAVVNISH*MGRKGR
Trigger: CCTGCCCTTTCTCCCCATCCAGTGGGAAATATTCAC...AACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 72 bp GTCAGTTCCGCCACTAGTGGTGCACCCTCCCCACCATaGGAGCCCCAGGCAGCAGCCTCTAGGCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: VSSATSGAPSPP*EPQAAASRLGD
Trigger: GTCACCCAGCCTAGAGGCTGCTGCCTGGGGCTCCCATGGTGGGGAGGGTGCACCACTAGTGGCGGAACTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR GCA 72 bp CCCAATCTCCTCGCCAGCCCGGCCACCTCAAAACGGTaGTTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: PNLLASPATSKR*LPPCGGVEASW
Trigger: CCAAGAGGCTTCTACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGCCGGGCTGGCGAGGAGATTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR TCA 72 bp ACCCAAGACACCCTGGCCCCATGCACAGGTGGAGGCTaGTTATGTGGAGGGAGCGGATGGGCCAGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: TQDTLAPCTGGG*LCGGSGWARQQ
Trigger: CTGCTGCCTGGCCCATCCGCTCCCTCCACATAATCAGCCTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 72 bp GAGATGCTGCACCTCCCACAAGCTCCCAGACAGTGCTaGTGCTGCCGGGCCGGGGACCACATCGAGAGAAGC +
Preference number: 3 (lower is better)
Translates to: EMLHLPQAPRQC*CCRAGDHIERS
Trigger: GCTTCTCTCGATGTGGTCCCCGGCCCGGCAGCATCAGCACTGTCTGGGAGCTTGTGGGAGGTGCAGCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CAA 90 bp CTGGGACGTTTGCAGACCCAGGTGGAATGGAGGGAGGTGGTGGTTGGGAGGACCTGGGAGCACATGGCCTaGGGGACAACAAGGCACCTG +
Preference number: 3 (lower is better)
Translates to: LGRLQTQVEWREVVVGRTWEHMA*GTTRHL
Trigger: CAGGTGCCTTGTTGTCCCCAAGGCCATGTGCTCCCA...GGTCCTCCCAACCACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 72 bp CTGCATCACCCAAGACACCCTGGCCCCATGCACAGGTaGAGGCTGATTATGTGGAGGGAGCGGATGGGCCAG +
Preference number: 3 (lower is better)
Translates to: LHHPRHPGPMHR*RLIMWRERMGQ
Trigger: CTGGCCCATCCGCTCCCTCCACATAATCAGCCTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 72 bp CTTCCCTCAGTCTGGGACTTTGGGGCAGGCACAGCGTaGCCCACAGAAGGTTGGGTGGTCACTGGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: LPSVWDFGAGTA*PTEGWVVTGSS
Trigger: AGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR CAA 90 bp CCGAGGTGGGAGGATCACTTGAGCTCACAAGGGGTTGGAGACCGGCCAAGGCAAGCACAGGGTGCTCCATaGACTCCACTGGCTCCATCC +
Preference number: 3 (lower is better)
Translates to: PRWEDHLSSQGVGDRPRQAQGAP*TPLAPS
Trigger: GGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTGC...TTGCCTTGGCCGGTCTCCAACCCCTTGTGAGCTCAAGTGATCCTCCCACCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR TCA 72 bp CCCTACTCCTGGCACAACCTCAGGAGGGGTGTGATGTaGATGCGGCTGGGAGCACATGGCCTTGGGGACAAC +
Preference number: 3 (lower is better)
Translates to: PYSWHNLRRGVM*MRLGAHGLGDN
Trigger: GTTGTCCCCAAGGCCATGTGCTCCCAGCCGCATTCACATCACACCCCTCCTGAGGTTGTGCCAGGAGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 72 bp ACAGTCCCTACTCCTGGCACAACCTCAGGAGGGGTGTaGTGTGAATGCGGCTGGGAGCACATGGCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: TVPTPGTTSGGV*CECGWEHMALG
Trigger: CCCCAAGGCCATGTGCTCCCAGCCGCATTCACATCACACCCCTCCTGAGGTTGTGCCAGGAGTAGGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR GCA 72 bp ATCAGGGGCCCTCCCCATGCTATGACCTGGGACGTTTaGAGACCCAGGTGGAATGGAGGGAGGTGGTGGTTG +
Preference number: 3 (lower is better)
Translates to: IRGPPHAMTWDV*RPRWNGGRWWL
Trigger: CAACCACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAGGTCATAGCATGGGGAGGGCCCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 72 bp TTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTaGTCACTGGCTCCTCTCCACCTTTGTAAAGGCCTG +
Preference number: 3 (lower is better)
Translates to: LGQAQRGPQKVG*SLAPLHLCKGL
Trigger: CAGGCCTTTACAAAGGTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR CAA 90 bp GGCCACCTCAAAACGGTGCTTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGAGGTGGGAGGATCACTaGAGCTCACAAGGGGTTGGA +
Preference number: 3 (lower is better)
Translates to: GHLKTVLASLRGCRSLLERWEDH*SSQGVG
Trigger: TCCAACCCCTTGTGAGCTCAAGTGATCCTCCCACCT...CTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR TCA 72 bp CAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATaGTACAGCACAAGCTCGGGGAAGTCACCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: QKSAAGGPVPSL*YSTSSGKSPGS
Trigger: GCTCCCTGGTGACTTCCCCGAGCTTGTGCTGTATCATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR-3UTR CAA 90 bp GGAGAGGAAACCTTCAAGGGGGTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGGCACAGGGTGCTCCATaGACTCCACTGGCTCCATCC +
Preference number: 3 (lower is better)
Translates to: GEETFKGVRRVDPQNPRKAQGAP*TPLAPS
Trigger: GGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTGC...CTTTCTTGGGTTCTGGGGATCCACCCTTCTCACCCCCTTGAAGGTTTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR TCA 72 bp GTTCCTATGAGCAGCAGGGACCTGAGTCCTGCTTGGTaGCAAGACCTCAGAGGGGTGTGGTGCAGGCAGAAC +
Preference number: 3 (lower is better)
Translates to: VPMSSRDLSPAW*QDLRGVWCRQN
Trigger: GTTCTGCCTGCACCACACCCCTCTGAGGTCTTGTCACCAAGCAGGACTCAGGTCCCTGCTGCTCATAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 72 bp CTCACAAGGGGTTGGAGACCGGCCAAGGCAACGTGGTaGGATCTCCGCCTCATGATGGGATTGAAACCCAGC +
Preference number: 3 (lower is better)
Translates to: LTRGWRPAKATW*DLRLMMGLKPS
Trigger: GCTGGGTTTCAATCCCATCATGAGGCGGAGATCTCACCACGTTGCCTTGGCCGGTCTCCAACCCCTTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR GCA 72 bp CTACCCAGTTCCTATGAGCAGCAGGGACCTGAGTCCTaGTTGGTGACAAGACCTCAGAGGGGTGTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: LPSSYEQQGPES*LVTRPQRGVVQ
Trigger: CTGCACCACACCCCTCTGAGGTCTTGTCACCAAGCAGGACTCAGGTCCCTGCTGCTCATAGGAACTGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR GCA 72 bp GTTTCTCTGATGACCACATGCGTCAAGGCCTGGGGCTaGCGCACCTGTTACCAGGGTCAAAAGCAGGAACTC +
Preference number: 3 (lower is better)
Translates to: VSLMTTCVKAWG*RTCYQGQKQEL
Trigger: GAGTTCCTGCTTTTGACCCTGGTAACAGGTGCGGCAGCCCCAGGCCTTGACGCATGTGGTCATCAGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR CCA 72 bp CTTGCTAAAGGGAAGGACAGAATAAGAGGGTGGAGCTaGCGGGTAGGCCCATCCAGGGTCAAGTCCTGCATG +
Preference number: 3 (lower is better)
Translates to: LAKGKDRIRGWS*RVGPSRVKSCM
Trigger: CATGCAGGACTTGACCCTGGATGGGCCTACCCGCCAGCTCCACCCTCTTATTCTGTCCTTCCCTTTAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 72 bp TTCAAGCTGGCAGTTAAGCTTCACCTTCCCTCAGTCTaGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAA +
Preference number: 3 (lower is better)
Translates to: FKLAVKLHLPSV*DFGAGTAWPTE
Trigger: TTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTGAAGCTTAACTGCCAGCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 72 bp CCTCATGTTTCTCTGATGACCACATGCGTCAAGGCCTaGGGCTGCCGCACCTGTTACCAGGGTCAAAAGCAG +
Preference number: 3 (lower is better)
Translates to: PHVSLMTTCVKA*GCRTCYQGQKQ
Trigger: CTGCTTTTGACCCTGGTAACAGGTGCGGCAGCCCCAGGCCTTGACGCATGTGGTCATCAGAGAAACATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CAA 90 bp AGTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACAGTTGGGGAGACATTTaGCAGCATGACAAGGAGATA +
Preference number: 3 (lower is better)
Translates to: SLGLWGRHSVAHRRLGGHSWGDI*QHDKEI
Trigger: TATCTCCTTGTCATGCTGCAAAATGTCTCCCCAACT...GTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR CCA 72 bp GCTCCAGAAGCCAAGGGTGAAAAGGGTGCCCAGACCTaGTGTGAATATTTCCCACTGGATGGGGAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: APEAKGEKGAQT*CEYFPLDGEKG
Trigger: CCCTTTCTCCCCATCCAGTGGGAAATATTCACACCAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR CAA 90 bp GTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACTACCATGACATCCCCTTaGGCTTTGAATGAAGGTTTT +
Preference number: 3 (lower is better)
Translates to: VWDFGAGTAWPTEGWVVTTMTSP*ALNEGF
Trigger: AAAACCTTCATTCAAAGCCAAAGGGGATGTCATGGT...AGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR-3UTR CAA 90 bp TTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAGCTCCATCCATTTTCTaGGGCCTGAGCTGTGGTTCT +
Preference number: 3 (lower is better)
Translates to: LPPCGGVEASWSSTCRKSAPSIF*GLSCGS
Trigger: AGAACCACAGCTCAGGCCCAAGAAAATGGATGGAGC...TGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR-3UTR CAA 90 bp TTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCATCCTCTCGCTCCTACTaGTCTCCCTTCCTTTCTCTC +
Preference number: 3 (lower is better)
Translates to: LPPCGGVEASWSSTCRKSSSRSY*SPFLSL
Trigger: GAGAGAAAGGAAGGGAGACAAGTAGGAGCGAGAGGA...TGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR CCA 72 bp TCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTaGAAACACATATTCGATGTCACCGGGGTTGAGGTA +
Preference number: 3 (lower is better)
Translates to: SELLVGSAAALG*KHIFDVTGVEV
Trigger: TACCTCAACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
3UTR GCA 72 bp TTGTGGTGCCATCGTCTTCTTGTGAAGAGCACAGGGTaGTCCATTGACTCCACTGGCTCCATCCATTTTCTT +
Preference number: 3 (lower is better)
Translates to: LWCHRLLVKSTG*SIDSTGSIHFL
Trigger: AAGAAAATGGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTGCTCTTCACAAGAAGACGATGGCACCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367642.3
ENST00000419909.6
3UTR GCA 72 bp GGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTaGAGAAGGGTCAATAGAATTGGCTGTCAGGAGGTG +
Preference number: 3 (lower is better)
Translates to: GQKQELNQKNKS*RRVNRIGCQEV
Trigger: CACCTCCTGACAGCCAATTCTATTGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR TCA 72 bp GCTAGGATTCGAATTTCAGCTCTGCCACGTATCCTGTaGCCTCAGACAGATTATGCTCATTACCTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: ARIRISALPRIL*PQTDYAHYLLS
Trigger: AGAGAGAAGGTAATGAGCATAATCTGTCTGAGGTCACAGGATACGTGGCAGAGCTGAAATTCGAATCCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR GCA 72 bp TCTGAAGTCAGAATGCTAGGATTCGAATTTCAGCTCTaGCACGTATCCTGTGACCTCAGACAGATTATGCTC +
Preference number: 3 (lower is better)
Translates to: SEVRMLGFEFQL*HVSCDLRQIML
Trigger: GAGCATAATCTGTCTGAGGTCACAGGATACGTGGCAGAGCTGAAATTCGAATCCTAGCATTCTGACTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419909.6
3UTR TCA 72 bp GAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCTaGAACACTGTTTGCTCTGTATCTTCTTTACTCTCA +
Preference number: 3 (lower is better)
Translates to: EAKESHPGQDSF*NTVCSVSSLLS
Trigger: TGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
3UTR CCA 72 bp TGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTaGCAGTTAAGCTTCACCTTCCCTCAGTCTGGGACT +
Preference number: 3 (lower is better)
Translates to: CLLCIFFTLISS*QLSFTFPQSGT
Trigger: AGTCCCAGACTGAGGGAAGGTGAAGCTTAACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CCA 72 bp TTTCCCACCAATCCATCAGGAAGCAGGGGGAAGGGTTaGAGTCTGAAATACACTGATATAGAACCAAAAATA +
Preference number: 3 (lower is better)
Translates to: FPTNPSGSRGKG*SLKYTDIEPKI
Trigger: TATTTTTGGTTCTATATCAGTGTATTTCAGACTCCAACCCTTCCCCCTGCTTCCTGATGGATTGGTGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR TCA 72 bp GTGACCTCAGACAGATTATGCTCATTACCTTCTCTCTaGGTTTATTTCATCCCTCATGTTTCTCTGATGACC +
Preference number: 3 (lower is better)
Translates to: VTSDRLCSLPSL*VYFIPHVSLMT
Trigger: GGTCATCAGAGAAACATGAGGGATGAAATAAACTCAGAGAGAAGGTAATGAGCATAATCTGTCTGAGGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CCA 90 bp CCCCAGGCAGCAGCCTCTAGGCTGGGTGACCCAAGTCCTCCTTCCTGGTGCCACCCGGAGCCAGGGGTCTaGCACCAGTGCTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PQAAASRLGDPSPPSWCHPEPGV*HQCWAR
Trigger: CCGAGCCCAGCACTGGTGCCAGACCCCTGGCTCCGG...GTGGCACCAGGAAGGAGGACTTGGGTCACCCAGCCTAGAGGCTGCTGCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CAGGGAGGGCGCAGGCTCGGGCGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTTCACCCAAGACACCCTaGCCCCATGCACAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QGGRRLGRHPEVSSGRTCSPKTP*PHAQVE
Trigger: CTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTGA...ACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCGCCCGAGCCTGCGCCCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GGCGCAGGCTCGGGCGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACACAGGGTGCTCCATTaGCTCCACTGGCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: GAGSGGTQKSAAGGPVPSHRVLH*LHWLHP
Trigger: TGGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTG...TGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCGCCCGAGCCTGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GGCCACCTCAAAACGGTGCTTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGGCTCCCAGACAGTGCTaGTGCTGCCGGGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GHLKTVLASLRGCRSLLEAPRQC*CCRAGD
Trigger: GTCCCCGGCCCGGCAGCATCAGCACTGTCTGGGAGC...CTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CCA 90 bp GTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACTGCACCCTCCCCACCATaGGAGCCCCAGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VWDFGAGTAWPTEGWVVTAPSPP*EPQAAA
Trigger: GGCTGCTGCCTGGGGCTCCCATGGTGGGGAGGGTGC...AGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CAGTTAAGCTTCACCTTCCCTCAGTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCGGAGCCAGGGGTCTaGCACCAGTGCTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QLSFTFPQSGTLGQAQRGPEPGV*HQCWAR
Trigger: CCGAGCCCAGCACTGGTGCCAGACCCCTGGCTCCGG...GCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTGAAGCTTAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CAA 72 bp AATCTCCTCGCCAGCCCGGCCACCTCAAAACGGTGCTaGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: NLLASPATSKRC*PPCGGVEASWS
Trigger: GCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGCCGGGCTGGCGAGGAGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp GGCCACCTCAAAACGGTGCTTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCCCTCTTGGCCGACATaGTGGAGGAGGCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GHLKTVLASLRGCRSLLEPSWPT*WRRPGC
Trigger: ACACCCTGGCCTCCTCCATCATGTCGGCCAAGAGGG...CTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp CAACCTCAGGAGGGGTGTGATGTGAATGCGGCTGGGAGCACATGGCCTTGGGGAGGGGTCTGGCACCAGTaGTGGGCTCGGGCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: QPQEGCDVNAAGSTWPWGGVWHQ*WARAGF
Trigger: AAACCCTGCCCGAGCCCAGCACTGGTGCCAGACCCC...TCCCCAAGGCCATGTGCTCCCAGCCGCATTCACATCACACCCCTCCTGAGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CACCCAAGACACCCTGGCCCCATGCACAGGTGGAGGCTGATTATGTGGAGGGAGTGTGGAGGGAGCGGATaGGCCAGGCAGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: HPRHPGPMHRWRLIMWRECGGSG*ARQQGL
Trigger: GAGACCCTGCTGCCTGGCCCATCCGCTCCCTCCACA...CTCCCTCCACATAATCAGCCTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp GCTCGGGCGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGATTCACCCAAGACACCCTaGCCCCATGCACAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ARAAPRSQQRADLSLHYDSPKTP*PHAQVE
Trigger: CTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTGA...ATCATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCGCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTGGGACGTTTGCAGACCCAGGTGGAATGGAGGGAGGTGGTGGTTGGGAGGACCCTGGTCACTTCCCCATaGATCTCAGGCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGRLQTQVEWREVVVGRTLVTSP*ISGLAA
Trigger: GGCAGCCAGGCCTGAGATCCATGGGGAAGTGACCAG...GGTCCTCCCAACCACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CCA 90 bp CAACCTCAGGAGGGGTGTGATGTGAATGCGGCTGGGAGCACATGGCCTTGGGGAGTCTGGCACCAGTGCTaGGCTCGGGCAGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: QPQEGCDVNAAGSTWPWGVWHQC*ARAGFH
Trigger: GTGAAACCCTGCCCGAGCCCAGCACTGGTGCCAGAC...TCCCCAAGGCCATGTGCTCCCAGCCGCATTCACATCACACCCCTCCTGAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CAACCTCAGGAGGGGTGTGATGTGAATGCGGCTGGGAGCACATGGCCTTGGGGAGCGGCTGGGAGCACATaGCCTTGGGGACAACAAGGC +
Preference number: 4 (lower is better)
Translates to: QPQEGCDVNAAGSTWPWGAAGST*PWGQQG
Trigger: GCCTTGTTGTCCCCAAGGCCATGTGCTCCCAGCCGC...TCCCCAAGGCCATGTGCTCCCAGCCGCATTCACATCACACCCCTCCTGAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AGGCTCGGGCGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGGAGGGAGGTGGTGGTTaGGAGGACCCTAAGATGACT +
Preference number: 4 (lower is better)
Translates to: RLGRHPEVSSGRTCPFTMEGGGG*EDPKMT
Trigger: AGTCATCTTAGGGTCCTCCCAACCACCACCTCCCTC...CATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCGCCCGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GAGCCCCAGGCAGCAGCCTCTAGGCTGGGTGACCCAAGTCCTCCTTCCTGGTGCCAGGACAAGAAGCCCTaGCTGTGCATCTTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EPQAAASRLGDPSPPSWCQDKKP*LCILRS
Trigger: GCTCCTTAAGATGCACAGTCAGGGCTTCTTGTCCTG...GCACCAGGAAGGAGGACTTGGGTCACCCAGCCTAGAGGCTGCTGCCTGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CACCCAAGACACCCTGGCCCCATGCACAGGTGGAGGCTGATTATGTGGAGGGAGGGCCATGGAAGGCCTTaGCTCCAAGTCACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HPRHPGPMHRWRLIMWREGHGRP*LQVTGA
Trigger: TGCCCCTGTGACTTGGAGTCAAGGCCTTCCATGGCC...CTCCCTCCACATAATCAGCCTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR TCA 90 bp CAGGCAGCAGGGTCTCTCCTGAGACCACACAGACTGGCGTCCGCTATCATCAGGCAGCAGGGTCTCTCCTaGGACCACACAGACTGGCGT +
Preference number: 4 (lower is better)
Translates to: QAAGSLLRPHRLASAIIRQQGLS*DHTDWR
Trigger: ACGCCAGTCTGTGTGGTCTCAGGAGAGACCCTGCTG...CCTGATGATAGCGGACGCCAGTCTGTGTGGTCTCAGGAGAGACCCTGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp CCCCAGGCAGCAGCCTCTAGGCTGGGTGACCCAAGTCCTCCTTCCTGGTGCCACACTGCTGGTAGGTTCTaGAGCTGCGCTAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PQAAASRLGDPSPPSWCHTAGRF*SCARLE
Trigger: TTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGT...GTGGCACCAGGAAGGAGGACTTGGGTCACCCAGCCTAGAGGCTGCTGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp GCTCGGGCGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGATCAGGGACCTGAGTCCTaGTTGGTGACAAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: ARAAPRSQQRADLSLHYDQGPES*LVTRPQ
Trigger: CTGAGGTCTTGTCACCAAGCAGGACTCAGGTCCCTG...ATCATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCGCCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTCAGAGGGGTGTGGTGCAGGCAGAACTCGAGGCTGAGGGGTTCCCTGCATCACCACCTTCCCTCAGTCTaGGACTTTGGGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: LRGVWCRQNSRLRGSLHHHLPSV*DFGAGT
Trigger: TGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTG...GTGATGCAGGGAACCCCTCAGCCTCGAGTTCTGCCTGCACCACACCCCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp GTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACTCAGCAGCCTCTAGGCTaGGTGACCCAAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VWDFGAGTAWPTEGWVVTQQPLG*VTQVLL
Trigger: AAGGAGGACTTGGGTCACCCAGCCTAGAGGCTGCTG...AGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CAA 72 bp CATCAGGGGCCCTCCCCATGCTATGACCTGGGACGTTaGCAGACCCAGGTGGAATGGAGGGAGGTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: HQGPSPCYDLGR*QTQVEWREVVV
Trigger: AACCACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAGGTCATAGCATGGGGAGGGCCCCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CACCCAAGACACCCTGGCCCCATGCACAGGTGGAGGCTGATTATGTGGAGGGAGTCCAGAAGCCAAGGGTaGAAAGGGTGCCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: HPRHPGPMHRWRLIMWRESRSQG*KGCPDL
Trigger: CAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGA...CTCCCTCCACATAATCAGCCTCCACCTGTGCATGGGGCCAGGGTGTCTTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CAGGCAGCAGGGTCTCTCCTGAGACCACACAGACTGGCGTCCGCTATCATCAGGTGCACAGGTGGAGGCTaGTTATGTGGAGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: QAAGSLLRPHRLASAIIRCTGGG*LCGGSG
Trigger: TCCGCTCCCTCCACATAATCAGCCTCCACCTGTGCA...CCTGATGATAGCGGACGCCAGTCTGTGTGGTCTCAGGAGAGACCCTGCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GGATGGGGAGAAAGGGCAGGACCTGAGGCAAGGTCAGTTCCGCCACTAGTGGTGTGCACAGGTGGAGGCTaGTTATGTGGAGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: GWGERAGPEARSVPPLVVCTGGG*LCGGSG
Trigger: TCCGCTCCCTCCACATAATCAGCCTCCACCTGTGCA...CACCACTAGTGGCGGAACTGACCTTGCCTCAGGTCCTGCCCTTTCTCCCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CAAGACCTCAGAGGGGTGTGGTGCAGGCAGAACTCGAGGCTGAGGGGTTCCCTGAAACCTTCAAGGGGGTaGGAAGGGTGGATCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QDLRGVWCRQNSRLRGSLKPSRG*EGWIPR
Trigger: TCTGGGGATCCACCCTTCTCACCCCCTTGAAGGTTT...CAGGGAACCCCTCAGCCTCGAGTTCTGCCTGCACCACACCCCTCTGAGGTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTTCACCTTCCCTCAGTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGACAGAATAAGAGGGTaGAGCTGGCGGGTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LHLPSVWDFGAGTAWPTEDRIRG*SWRVGP
Trigger: TGGGCCTACCCGCCAGCTCCACCCTCTTATTCTGTC...TTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CAA 72 bp GGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTaGGGTGGTCACTGGCTCCTCTCCACCTTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: GLWGRHSVAHRR*GGHWLLSTFVK
Trigger: CTTTACAAAGGTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TACAGCACAAGCTCGGGGAAGTCACCAGGGAGCCGGAGCCAGGGGTCTGGCACCCCTCGTCCTTCAAATTaGAGCCAAAGAATCACACCC +
Preference number: 4 (lower is better)
Translates to: YSTSSGKSPGSRSQGSGTPRPSN*SQRITP
Trigger: GGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGG...GGTGCCAGACCCCTGGCTCCGGCTCCCTGGTGACTTCCCCGAGCTTGTGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR TCA 90 bp CTGGGACGTTTGCAGACCCAGGTGGAATGGAGGGAGGTGGTGGTTGGGAGGACCACTAGGATCAGCAAATaGCCCCTGACTCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LGRLQTQVEWREVVVGRTTRISK*PLTPGH
Trigger: GTGACCAGGAGTCAGGGGTCATTTGCTGATCCTAGT...GGTCCTCCCAACCACCACCTCCCTCCATTCCACCTGGGTCTGCAAACGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CCA 90 bp AGTCCTGCATGGTCACAGCTAAGGAGGCTCCACAGGCCTAGAAGGCAAGGCAGGTGGCCCACAGAAGGTTaGGTGGTCACTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SPAWSQLRRLHRPRRQGRWPTEG*VVTGSS
Trigger: AGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCA...CCTGCCTTGCCTTCTAGGCCTGTGGAGCCTCCTTAGCTGTGACCATGCAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp GAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTCTCAGTCTGGGACTTTaGGGCAGGCACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ELGGDESELLVGSAAALGLSLGL*GRHSVA
Trigger: GGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAG...ACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AGGCTCGGGCGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGTACTTTGGTCGGCTCTaGCTTCAATTCCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: RLGRHPEVSSGRTCPFTMYFGRL*LQFQAN
Trigger: GTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAGTA...CATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCGCCCGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCAGAACTCGAGGCTGAGGGGTTCCCTGCATCACCCAAGACACGTACACGGGTGGCCATaGAAGGCCTTGACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VWCRQNSRLRGSLHHPRHVHGWP*KALTPS
Trigger: ACTTGGAGTCAAGGCCTTCCATGGCCACCCGTGTAC...GTGTCTTGGGTGATGCAGGGAACCCCTCAGCCTCGAGTTCTGCCTGCACCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CCA 90 bp GGATGGGGAGAAAGGGCAGGACCTGAGGCAAGGTCAGTTCCGCCACTAGTGGTGGAGGGAGGTGGTGGTTaGGAGGACCCTAAGATGACT +
Preference number: 4 (lower is better)
Translates to: GWGERAGPEARSVPPLVVEGGGG*EDPKMT
Trigger: AGTCATCTTAGGGTCCTCCCAACCACCACCTCCCTC...CACCACTAGTGGCGGAACTGACCTTGCCTCAGGTCCTGCCCTTTCTCCCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp AGTCCTGCATGGTCACAGCTAAGGAGGCTCCACAGGCCTAGAAGGCAAGGCAGGCACATCCTGTATGACTaGGCATGCTGGGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPAWSQLRRLHRPRRQGRHILYD*ACWVAA
Trigger: TGCTGCCACCCAGCATGCTCAGTCATACAGGATGTG...CCTGCCTTGCCTTCTAGGCCTGTGGAGCCTCCTTAGCTGTGACCATGCAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGATACAGCACTGCCCAGACCTGGTGTaGATATTTCCCACTGGATGG +
Preference number: 4 (lower is better)
Translates to: RHPEVSSGRTCPFTMIQHCPDLV*IFPTGW
Trigger: CCATCCAGTGGGAAATATTCACACCAGGTCTGGGCA...GTGCTGTATCATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp CCCCAGGCAGCAGCCTCTAGGCTGGGTGACCCAAGTCCTCCTTCCTGGTGCCACCAATTCCAGGCAAACTaGCTTGTAGTTCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PQAAASRLGDPSPPSWCHQFQAN*LVVLAQ
Trigger: CTGAGCAAGAACTACAAGGCAGTTTGCCTGGAATTG...GTGGCACCAGGAAGGAGGACTTGGGTCACCCAGCCTAGAGGCTGCTGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp CTCAGAGGGGTGTGGTGCAGGCAGAACTCGAGGCTGAGGGGTTCCCTGCATCACGGTAGGTTCTGCAGCTaGGCTAGGTTGGAAACACAT +
Preference number: 4 (lower is better)
Translates to: LRGVWCRQNSRLRGSLHHGRFCS*ARLETH
Trigger: ATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACC...GTGATGCAGGGAACCCCTCAGCCTCGAGTTCTGCCTGCACCACACCCCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp CTTCACCTTCCCTCAGTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAATGACCTGGGACGTTTaGAGACCCAGGTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: LHLPSVWDFGAGTAWPTEMTWDV*RPRWNG
Trigger: TCCATTCCACCTGGGTCTGCAAACGTCCCAGGTCAT...TTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCAGAACTCGAGGCTGAGGGGTTCCCTGCATCACCCAAGACACCTTGGGCCTGAGCTGTaGTTCTCTGTGAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VWCRQNSRLRGSLHHPRHLGPEL*FSVSLS
Trigger: GGAAAGACTCACAGAGAACCACAGCTCAGGCCCAAG...GTGTCTTGGGTGATGCAGGGAACCCCTCAGCCTCGAGTTCTGCCTGCACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AGCGTGGCCCACAGAAGGTTGGGTGGTCACTGGCTCCTCTCCACCTTTGTAAAGGTTTGCAGACCCAGGTaGAATGGAGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SVAHRRLGGHWLLSTFVKVCRPR*NGGRWW
Trigger: CCACCACCTCCCTCCATTCCACCTGGGTCTGCAAAC...CTTTACAAAGGTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GCATGCTGGGTGGCAGCATCTGCTAACAGTCCCTACTCCTGGCACAACCTCAGGTCTTTCCCATCAGCCTaGGTTCCTGCTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: ACWVAASANSPYSWHNLRSFPSA*VPAAPL
Trigger: CAAAGGAGCAGCAGGAACTCAGGCTGATGGGAAAGA...CCTGAGGTTGTGCCAGGAGTAGGGACTGTTAGCAGATGCTGCCACCCAGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTCACAGGGTGCTCCATTaGCTCCACTGGCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: ELGGDESELLVGSAAALGHRVLH*LHWLHP
Trigger: TGGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTG...ACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTAGGAGGGGTGTGATGTaGATGCGGCTGGGAGCACAT +
Preference number: 4 (lower is better)
Translates to: ELGGDESELLVGSAAALGRRGVM*MRLGAH
Trigger: ATGTGCTCCCAGCCGCATTCACATCACACCCCTCCT...ACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACTCGATGTCACCGGGGTTaGGGTACAGATAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: VWDFGAGTAWPTEGWVVTRCHRG*GTDKSE
Trigger: TTCTGATTTATCTGTACCTCAACCCCGGTGACATCG...AGTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp GGGGTTGAGGTACAGATAAATCAGAAGGCAGCTCCAGAAGCCAAGGGTGAAAAGGGGGTCTGGCACCAGTaGTGGGCTCGGGCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GVEVQINQKAAPEAKGEKGVWHQ*WARAGF
Trigger: AAACCCTGCCCGAGCCCAGCACTGGTGCCAGACCCC...CTTTTCACCCTTGGCTTCTGGAGCTGCCTTCTGATTTATCTGTACCTCAACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp GAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTCATGGATCTCAGGCCTaGCTGCCTGCATGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: ELGGDESELLVGSAAALGHGSQA*LPAWPQ
Trigger: TTGAGGCCATGCAGGCAGCCAGGCCTGAGATCCATG...ACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CCA 90 bp GTGGAGGGAGCGGATGGGCCAGGCAGCAGGGTCTCTCCTGAGACCACACAGACTGTCTGGGACAAATCTTaGCCACTAGGATCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: VEGADGPGSRVSPETTQTVWDKS*PLGSAN
Trigger: ATTTGCTGATCCTAGTGGCCAAGATTTGTCCCAGAC...AGTCTGTGTGGTCTCAGGAGAGACCCTGCTGCCTGGCCCATCCGCTCCCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CCA 90 bp TGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCCCTTGCTAAAGGGAAGCAGCAGCCTCTAGGCTaGGTGACCCAAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: WSKKGSLLGTLSALAKGKQQPLG*VTQVLL
Trigger: AAGGAGGACTTGGGTCACCCAGCCTAGAGGCTGCTG...CTTCCCTTTAGCAAGGGCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAACATGCGTCAAGGCCTaGGGCTGCCGCACCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LPPCGGVEASWSSTCRKSTCVKA*GCRTCY
Trigger: GTAACAGGTGCGGCAGCCCCAGGCCTTGACGCATGT...TGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp TTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCACACAGGGTGCTCCATTaGCTCCACTGGCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: LPPCGGVEASWSSTCRKSHRVLH*LHWLHP
Trigger: TGGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTG...TGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp TCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTTGAGGTAACCTCAGGAGGGGTGTaGTGTGAATGCGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SAAALGWKHIFDVTGVEVTSGGV*CECGWE
Trigger: CTCCCAGCCGCATTCACATCACACCCCTCCTGAGGT...TACCTCAACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGCACATCCTGTATGACTaGGCATGCTGGGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGGDESELLVGSAAALGWHILYD*ACWVAA
Trigger: TGCTGCCACCCAGCATGCTCAGTCATACAGGATGTG...CCAACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGTGCCACATCCTGTATaGCTGAGCATGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: AGRFCSCARLETHIRCHRVPHPV*LSMLGG
Trigger: GCCACCCAGCATGCTCAGTCATACAGGATGTGGCAC...CCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp AAGGAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTATCCAGAAGCCAAGGGTaGAAAGGGTGCCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: KELGGDESELLVGSAAALSRSQG*KGCPDL
Trigger: CAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGA...TAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR GCA 90 bp TGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCCCTTGCTAAAGGGAAGGTGAAGAGCACAGGGTaGTCCATTGACTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: WSKKGSLLGTLSALAKGKVKSTG*SIDSTG
Trigger: GCCAGTGGAGTCAATGGAGCACCCTGTGCTCTTCAC...CTTCCCTTTAGCAAGGGCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp GTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGCTACCCAGTTCCTATGAGCAGTCAGGCCTGGCTGCCTaGATGGCCTCAAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VRRVDPQNPRKLPSSYEQSGLAA*MASKGL
Trigger: AAGCCCTTTTGAGGCCATGCAGGCAGCCAGGCCTGA...CTGCTCATAGGAACTGGGTAGCTTTCTTGGGTTCTGGGGATCCACCCTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR GCA 90 bp AGGCAGCTCCAGAAGCCAAGGGTGAAAAGGGTGCCCAGACCTGGTGTGAATATTGATCTCAGGCCTGGCTaGCTGCATGGCCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: RQLQKPRVKRVPRPGVNIDLRPG*LHGLKR
Trigger: CCTTTTGAGGCCATGCAGGCAGCCAGGCCTGAGATC...AATATTCACACCAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGAGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR GCA 90 bp CCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGATACAGCACAAGCTTCCAGGGTCAAGTCCTaGATGGTCACAGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: PRSQQRADLSLHYDTAQASRVKS*MVTAKE
Trigger: CTCCTTAGCTGTGACCATGCAGGACTTGACCCTGGA...AGCTTGTGCTGTATCATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp AGTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGGTTGGGTGGTCACAACAAACATTTCTCCTaGAGAGGACAGAAACGGCAC +
Preference number: 4 (lower is better)
Translates to: SLGLWGRHSVAHRRLGGHNKHFS*RGQKRH
Trigger: GTGCCGTTTCTGTCCTCTGCAGGAGAAATGTTTGTT...GTGACCACCCAACCTTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATGTCAAGGCCTGGGGCTaGCGCACCTGTTACCAGGGT +
Preference number: 4 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNVKAWG*RTCYQG
Trigger: ACCCTGGTAACAGGTGCGGCAGCCCCAGGCCTTGAC...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CCA 90 bp GTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGCTACCCAGTTCCTATGAGCAGCCACAGAAGGTTGGGTaGTCACTGGCTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VRRVDPQNPRKLPSSYEQPQKVG*SLAPLH
Trigger: GTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGG...CTGCTCATAGGAACTGGGTAGCTTTCTTGGGTTCTGGGGATCCACCCTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACCTCAGTCTGGGACTTTaGGGCAGGCACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PSFLVLQIEAKESHPGQDLSLGL*GRHSVA
Trigger: GGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAG...GTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp ACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACGCGGCTGGGAGCACATaGCCTTGGGGACAACAAGGC +
Preference number: 4 (lower is better)
Translates to: TAGRFCSCARLETHIRCHAAGST*PWGQQG
Trigger: GCCTTGTTGTCCCCAAGGCCATGTGCTCCCAGCCGC...GTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CCCTGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCCCTTGCTAAAGGGAAGGGTGCCCAGACCTaGTGTGAATATTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: PWSKKGSLLGTLSALAKGKGAQT*CEYFPL
Trigger: CAGTGGGAAATATTCACACCAGGTCTGGGCACCCTT...CCCTTTAGCAAGGGCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTTCACCTTCCCTCAGTCTGGGACTTTGGGGCAGGCACAGCGTGGCCCACAGAAGCAGCTGCGCTAGGTTaGAAACACATATTCGATGTC +
Preference number: 4 (lower is better)
Translates to: LHLPSVWDFGAGTAWPTEAAALG*KHIFDV
Trigger: GACATCGAATATGTGTTTCCAACCTAGCGCAGCTGC...TTCTGTGGGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AAAGATCAATTTCCCCTGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCCAGACCCAGGTGGAATaGAGGGAGGTGGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: KDQFPLVQEGQPARHLICQTQVE*REVVVG
Trigger: CCCAACCACCACCTCCCTCCATTCCACCTGGGTCTG...GCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCAGGGGAAATTGATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTTTGCAGACCCAGGTaGAATGGAGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVGSAAALGWKHIFDVTGVCRPR*NGGRWW
Trigger: CCACCACCTCCCTCCATTCCACCTGGGTCTGCAAAC...CCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GGGGTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGCTACCCAGTTCCTATGAGAGCTGTGGTTCTCTGTaGGTCTTTCCCATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GVRRVDPQNPRKLPSSYESCGSL*VFPISL
Trigger: CAGGCTGATGGGAAAGACTCACAGAGAACCACAGCT...CTCATAGGAACTGGGTAGCTTTCTTGGGTTCTGGGGATCCACCCTTCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGCAGGACAAGAAGCCCTaGCTGTGCATCTTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGGDESELLVGSAAALGWQDKKP*LCILRS
Trigger: GCTCCTTAAGATGCACAGTCAGGGCTTCTTGTCCTG...CCAACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR TCA 90 bp AAAGATCAATTTCCCCTGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCTCCAGAAGCCAAGGGTaGAAAGGGTGCCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: KDQFPLVQEGQPARHLICSRSQG*KGCPDL
Trigger: CAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGA...GCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCAGGGGAAATTGATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATGTCTGGGGTAGAGCCTaGGATGCTGCACCTCCCACA +
Preference number: 4 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNVWGRA*DAAPPT
Trigger: TGTGGGAGGTGCAGCATCTCAGGCTCTACCCCAGAC...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp CAAGACCTCAGAGGGGTGTGGTGCAGGCAGAACTCGAGGCTGAGGGGTTCCCTGTGTTTTCTTCAATTCTaGCCTCTTGGCCGACATGAT +
Preference number: 4 (lower is better)
Translates to: QDLRGVWCRQNSRLRGSLCFLQF*PLGRHD
Trigger: ATCATGTCGGCCAAGAGGGCAGAATTGAAGAAAACA...CAGGGAACCCCTCAGCCTCGAGTTCTGCCTGCACCACACCCCTCTGAGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp CCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGATACAGCACAAGCTATCAGCCTGAGTTCCTaGTGCTCCTTTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PRSQQRADLSLHYDTAQAISLSS*CSFGAL
Trigger: AAGAGCACCAAAGGAGCAGCAGGAACTCAGGCTGAT...AGCTTGTGCTGTATCATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp GGGGTTGAGGTACAGATAAATCAGAAGGCAGCTCCAGAAGCCAAGGGTGAAAAGCTCAGAGGGGTGTGGTaGAGGCAGAACTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GVEVQINQKAAPEAKGEKLRGVW*RQNSRL
Trigger: CAGCCTCGAGTTCTGCCTGCACCACACCCCTCTGAG...CTTTTCACCCTTGGCTTCTGGAGCTGCCTTCTGATTTATCTGTACCTCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp GCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGCAGGGACCTGAGTCCTaGTTGGTGACAAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: AGRFCSCARLETHIRCHRQGPES*LVTRPQ
Trigger: CTGAGGTCTTGTCACCAAGCAGGACTCAGGTCCCTG...CCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTTTGTAAAGGCCTGAGGCCTCTGAAGGAATGTTCCCTTTGGGGGTGGAGGGAGACTGAGCATGCTGGGTaGCAGCATCTGCTAACAGTC +
Preference number: 4 (lower is better)
Translates to: LCKGLRPLKECSLWGWRETEHAG*QHLLTV
Trigger: GACTGTTAGCAGATGCTGCCACCCAGCATGCTCAGT...CTCCCTCCACCCCCAAAGGGAACATTCCTTCAGAGGCCTCAGGCCTTTACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATGCACCCTCCCCACCATaGGAGCCCCAGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QGRTVSETLFALYLLYSHAPSPP*EPQAAA
Trigger: GGCTGCTGCCTGGGGCTCCCATGGTGGGGAGGGTGC...ATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CCGAGGTGGGAGGATCACTTGAGCTCACAAGGGGTTGGAGACCGGCCAAGGCAAGGTGTAGAAGCCTCTTaGAGCAGCACTTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PRWEDHLSSQGVGDRPRQGVEAS*SSTCRK
Trigger: TTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACC...TTGCCTTGGCCGGTCTCCAACCCCTTGTGAGCTCAAGTGATCCTCCCACCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp AGAAAGCTACCCAGTTCCTATGAGCAGCAGGGACCTGAGTCCTGCTTGGTGACATCTTTCCCATCAGCCTaGGTTCCTGCTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: RKLPSSYEQQGPESCLVTSFPSA*VPAAPL
Trigger: CAAAGGAGCAGCAGGAACTCAGGCTGATGGGAAAGA...TGTCACCAAGCAGGACTCAGGTCCCTGCTGCTCATAGGAACTGGGTAGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGCTGTGGTTCTCTGTaGGTCTTTCCCATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPPCGGVEASWSSTCRKSSCGSL*VFPISL
Trigger: CAGGCTGATGGGAAAGACTCACAGAGAACCACAGCT...TGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp ACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACGTGCCACATCCTGTATaGCTGAGCATGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TAGRFCSCARLETHIRCHVPHPV*LSMLGG
Trigger: GCCACCCAGCATGCTCAGTCATACAGGATGTGGCAC...GTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp CTTAAGGAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGGTCCTGTGTCACTCCTaGTTTGGTAAACCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LKELGGDESELLVGSAAAVLCHS*FGKPPF
Trigger: GAAGGGCGGTTTACCAAAGCAGGAGTGACACAGGAC...CGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTCCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367641.7
CDS-3UTR GCA 90 bp TTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAGTCCTGTGTCACTCCTaGTTTGGTAAACCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPPCGGVEASWSSTCRKSVLCHS*FGKPPF
Trigger: GAAGGGCGGTTTACCAAAGCAGGAGTGACACAGGAC...TGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp GGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTACTGCTGGTAGGTTCTaGAGCTGCGCTAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GRFCSCARLETHIRCHRGTAGRF*SCARLE
Trigger: TTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGT...ACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR GCA 90 bp CTGCCGCACCTGTTACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGTCTCTGATGACCACATaGGTCAAGGCCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPHLLPGSKAGTQSEEQESLMTT*VKAWGC
Trigger: GCAGCCCCAGGCCTTGACGCATGTGGTCATCAGAGA...CTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGTAACAGGTGCGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp CAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCAATGCCACCTCAAAACGGTaGTTGCCTCCCTGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: QGQKQELNQKNKSCRRVNATSKR*LPPCGG
Trigger: ACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGC...ATTGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CCA 90 bp TTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCACTTGGGCCTGAGCTGTaGTTCTCTGTGAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LPPCGGVEASWSSTCRKSLGPEL*FSVSLS
Trigger: GGAAAGACTCACAGAGAACCACAGCTCAGGCCCAAG...TGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CCA 90 bp CCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCGTCTGGCACCAGTGCTaGGCTCGGGCAGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PRAGQFLKHCLLCIFFTLVWHQC*ARAGFH
Trigger: GTGAAACCCTGCCCGAGCCCAGCACTGGTGCCAGAC...GAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AGCCAAAGAATCACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATAAGAGGGTGGAGCTaGCGGGTAGGCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SQRITPRAGQFLKHCLLCIRGWS*RVGPSR
Trigger: CCTGGATGGGCCTACCCGCCAGCTCCACCCTCTTAT...ACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp GCTCCTCTCCACCTTTGTAAAGGCCTGAGGCCTCTGAAGGAATGTTCCCTTTGGACTGAGCATGCTGGGTaGCAGCATCTGCTAACAGTC +
Preference number: 4 (lower is better)
Translates to: APLHLCKGLRPLKECSLWTEHAG*QHLLTV
Trigger: GACTGTTAGCAGATGCTGCCACCCAGCATGCTCAGT...CCAAAGGGAACATTCCTTCAGAGGCCTCAGGCCTTTACAAAGGTGGAGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
3UTR CAA 72 bp GAGGGATTGAATGGGCCAAGACATACCCAGGCTGCCTaGAACATGTGTGAGGCCTGGAACAAGAGATCCAAC +
Preference number: 4 (lower is better)
Translates to: EGLNGPRHTQAA*NMCEAWNKRSN
Trigger: GTTGGATCTCTTGTTCCAGGCCTCACACATGTTCAAGGCAGCCTGGGTATGTCTTGGCCCATTCAATCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp AAACATTTCTCCTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTGCCCTCTTGGCCGACATaGTGGAGGAGGCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KHFSCRGQKRHKKDQFPLPSWPT*WRRPGC
Trigger: ACACCCTGGCCTCCTCCATCATGTCGGCCAAGAGGG...CAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAGGAGAAATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GGGGTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGCTACCCAGTTCCTATGAGGGGCAGGACAGTTTCTaGAACACTGTTTGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: GVRRVDPQNPRKLPSSYEGQDSF*NTVCSV
Trigger: TACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCC...CTCATAGGAACTGGGTAGCTTTCTTGGGTTCTGGGGATCCACCCTTCTCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCCCTGTCCCTTCACTATaGTACAGCACAAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ELLVGSAAALGWKHIFDVPVPSL*YSTSSG
Trigger: CCCCGAGCTTGTGCTGTATCATAGTGAAGGGACAGG...GACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp ACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCCTGTCCCTTCACTATaGTACAGCACAAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TAGRFCSCARLETHIRCHPVPSL*YSTSSG
Trigger: CCCCGAGCTTGTGCTGTATCATAGTGAAGGGACAGG...GTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTTGAGGTATGCCCAGACCTGGTGTaGATATTTCCCACTGGATGG +
Preference number: 4 (lower is better)
Translates to: SAAALGWKHIFDVTGVEVCPDLV*IFPTGW
Trigger: CCATCCAGTGGGAAATATTCACACCAGGTCTGGGCA...TACCTCAACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TACTCTCATTTCAAGCTGGCAGTTAAGCTTCACCTTCCCTCAGTCTGGGACTTTCAGCAGGGTCTCTCCTaGGACCACACAGACTGGCGT +
Preference number: 4 (lower is better)
Translates to: YSHFKLAVKLHLPSVWDFQQGLS*DHTDWR
Trigger: ACGCCAGTCTGTGTGGTCTCAGGAGAGACCCTGCTG...AAAGTCCCAGACTGAGGGAAGGTGAAGCTTAACTGCCAGCTTGAAATGAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATTTGGCTGTCAGGAGGTaGCGAGCTTCCTTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNLAVRR*RASFRG
Trigger: TCCCCTAAAGGAAGCTCGTCACCTCCTGACAGCCAA...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATATACCCAGGCTGCCTTaGACATGTGTGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNIPRLP*TCVRPG
Trigger: TCCAGGCCTCACACATGTTCAAGGCAGCCTGGGTAT...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp CTGCCGCACCTGTTACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGGTGAAGAGCACAGGGTaGTCCATTGACTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LPHLLPGSKAGTQSEEQEVKSTG*SIDSTG
Trigger: GCCAGTGGAGTCAATGGAGCACCCTGTGCTCTTCAC...CTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGTAACAGGTGCGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CCA 90 bp AGGCAGCTCCAGAAGCCAAGGGTGAAAAGGGTGCCCAGACCTGGTGTGAATATTGGCCTGGGGTTGGGGTaGTATTTAACAGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: RQLQKPRVKRVPRPGVNIGLGLG*YLTGQE
Trigger: TTCTTGTCCTGTTAAATACCACCCCAACCCCAGGCC...AATATTCACACCAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp GGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTGGCCTGGGGTTGGGGTaGTATTTAACAGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: GRFCSCARLETHIRCHRGGLGLG*YLTGQE
Trigger: TTCTTGTCCTGTTAAATACCACCCCAACCCCAGGCC...ACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR CCA 90 bp GTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTTGGAGGGGCAGAGAGTTaGGGAGACATTTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VGSAAALGWKHIFDVTGVGGAES*GDILQH
Trigger: ATGCTGCAAAATGTCTCCCCAACTCTCTGCCCCTCC...AACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CCA 90 bp ATCAATTTCCCCTGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCCCTTATATTTCCCACTGGATaGGGAGAAAGGGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: INFPWSKKGSLLGTLSALIFPTG*GERAGP
Trigger: AGGTCCTGCCCTTTCTCCCCATCCAGTGGGAAATAT...AAGGGCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCAGGGGAAATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AGAAAGCTACCCAGTTCCTATGAGCAGCAGGGACCTGAGTCCTGCTTGGTGACAAAGGGTGCCCAGACCTaGTGTGAATATTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: RKLPSSYEQQGPESCLVTKGAQT*CEYFPL
Trigger: CAGTGGGAAATATTCACACCAGGTCTGGGCACCCTT...TGTCACCAAGCAGGACTCAGGTCCCTGCTGCTCATAGGAACTGGGTAGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTTGAGGTAAAGGGTGCCCAGACCTaGTGTGAATATTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: SAAALGWKHIFDVTGVEVKGAQT*CEYFPP
Trigger: GGGTGGGAAATATTCACACCAGGTCTGGGCACCCTT...TACCTCAACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442872.1
CDS-3UTR TCA 90 bp CAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATCCCTCTTGGCCGACATaGTGGAGGAGGCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QGRTVSETLFALYLLYSHPSWPT*WRRPGC
Trigger: ACACCCTGGCCTCCTCCATCATGTCGGCCAAGAGGG...ATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGCCTCGTCCTTCAAATTaGAGCCAAAGAATCACACCC +
Preference number: 4 (lower is better)
Translates to: LVGSAAALGWKHIFDVTGPRPSN*SQRITP
Trigger: GGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGG...CCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GGGGTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGCTACCCAGTTCCTATGAGAGCTTAGCAAAGAGATaGAACAAGGAGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: GVRRVDPQNPRKLPSSYESLAKR*NKEELV
Trigger: CACCAGTTCCTCCTTGTTTCATCTCTTTGCTAAGCT...CTCATAGGAACTGGGTAGCTTTCTTGGGTTCTGGGGATCCACCCTTCTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GGGGTTGAGGTACAGATAAATCAGAAGGCAGCTCCAGAAGCCAAGGGTGAAAAGCAGGACAAGAAGCCCTaGCTGTGCATCTTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GVEVQINQKAAPEAKGEKQDKKP*LCILRS
Trigger: GCTCCTTAAGATGCACAGTCAGGGCTTCTTGTCCTG...CTTTTCACCCTTGGCTTCTGGAGCTGCCTTCTGATTTATCTGTACCTCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGCGATGTCACCGGGGTTaGGGTACAGATAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: LVGSAAALGWKHIFDVTGRCHRG*GTDKSE
Trigger: TTCTGATTTATCTGTACCTCAACCCCGGTGACATCG...CCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR TCA 90 bp GGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTCGATGTCACCGGGGTTaGGGTACAGATAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: GRFCSCARLETHIRCHRGRCHRG*GTDKSE
Trigger: TTCTGATTTATCTGTACCTCAACCCCGGTGACATCG...ACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR TCA 90 bp CCGAGGTGGGAGGATCACTTGAGCTCACAAGGGGTTGGAGACCGGCCAAGGCAATCATTACCTTCTCTCTaGGTTTATTTCATCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PRWEDHLSSQGVGDRPRQSLPSL*VYFIPH
Trigger: ATGAGGGATGAAATAAACTCAGAGAGAAGGTAATGA...TTGCCTTGGCCGGTCTCCAACCCCTTGTGAGCTCAAGTGATCCTCCCACCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATAGGGCTTTGAGGGATTaGATGGGCCAAGACATACCC +
Preference number: 4 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNRALRD*MGQDIP
Trigger: GGGTATGTCTTGGCCCATTCAATCCCTCAAAGCCCT...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp ACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACTGCCCAGACCTGGTGTaGATATTTCCCACCCGATTG +
Preference number: 4 (lower is better)
Translates to: TAGRFCSCARLETHIRCHCPDLV*IFPTRL
Trigger: CAATCGGGTGGGAAATATTCACACCAGGTCTGGGCA...GTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442872.1
CDS-3UTR GCA 90 bp TTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCGTGAAGAGCACAGGGTaGTCCATTGACTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: FLVLQIEAKESHPGQDSFVKSTG*SIDSTG
Trigger: GCCAGTGGAGTCAATGGAGCACCCTGTGCTCTTCAC...GAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp TCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTTGAGGTAGGTAGGTTCTGCAGCTaGGCTAGGTTGGAAACACAT +
Preference number: 4 (lower is better)
Translates to: SAAALGWKHIFDVTGVEVGRFCS*ARLETH
Trigger: ATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACC...TACCTCAACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR GCA 90 bp TATTTAACAGGACAAGAAGCCCTGACTGTGCATCTTAAGGAGCTTGGAGGTGATCTCAGAGGGGTGTGGTaGAGGCAGAACTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YLTGQEALTVHLKELGGDLRGVW*RQNSRL
Trigger: CAGCCTCGAGTTCTGCCTGCACCACACCCCTCTGAG...ATCACCTCCAAGCTCCTTAAGATGCACAGTCAGGGCTTCTTGTCCTGTTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTTAAGGAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGTGTTTTGGTCGGCTCTaGCTTCAATTCCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: LKELGGDESELLVGSAAACFGRL*LQFQAN
Trigger: GTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAACA...CGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTCCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367641.7
CDS-3UTR CCA 90 bp GGGGTTGAGGTACAGATAAATCAGAAGGCAGCTCCAGAAGCCAAGGGTGAAAAGCTTGGGCCTGAGCTGTaGTTCTCTGTGAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GVEVQINQKAAPEAKGEKLGPEL*FSVSLS
Trigger: GGAAAGACTCACAGAGAACCACAGCTCAGGCCCAAG...CTTTTCACCCTTGGCTTCTGGAGCTGCCTTCTGATTTATCTGTACCTCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGCCTGGGGTTGGGGTaGTATTTAACAGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: LLVGSAAALGWKHIFDVTGLGLG*YLTGQE
Trigger: TTCTTGTCCTGTTAAATACCACCCCAACCCCAGGCC...GGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR CCA 90 bp GTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTTGTGAATATTTCCCACTaGATGGGGAGAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VGSAAALGWKHIFDVTGVVNISH*MGRKGR
Trigger: CCTGCCCTTTCTCCCCATCCAGTGGGAAATATTCAC...AACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCTCTTTCCCATCAGCCTaGGTTCCTGCTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FLVLQIEAKESHPGQDSFSFPSA*VPAAPL
Trigger: CAAAGGAGCAGCAGGAACTCAGGCTGATGGGAAAGA...GAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp AAGGAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAAGCTTAGCAAAGAGATaGAACAAGGAGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: KELGGDESELLVGSAAALSLAKR*NKEELV
Trigger: CACCAGTTCCTCCTTGTTTCATCTCTTTGCTAAGCT...TAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp GAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGTTTTCTTCAATTCTaGCCTCTTGGCCGACATGAT +
Preference number: 4 (lower is better)
Translates to: ELGGDESELLVGSAAALGCFLQF*PLGRHD
Trigger: ATCATGTCGGCCAAGAGGGCAGAATTGAAGAAAACA...ACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp GGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTAACAAACATTTCTCCTaGAGAGGACAGAAACGGCAC +
Preference number: 4 (lower is better)
Translates to: GRFCSCARLETHIRCHRGNKHFS*RGQKRH
Trigger: GTGCCGTTTCTGTCCTCTGCAGGAGAAATGTTTGTT...ACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AAACATTTCTCCTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTGTGGCCCACAGAAGGTTaGGTGGTCACTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KHFSCRGQKRHKKDQFPLWPTEG*VVTGSS
Trigger: AGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCA...CAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAGGAGAAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TATTTAACAGGACAAGAAGCCCTGACTGTGCATCTTAAGGAGCTTGGAGGTGATCACCTTCCCTCAGTCTaGGACTTTGGGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: YLTGQEALTVHLKELGGDHLPSV*DFGAGT
Trigger: TGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTG...ATCACCTCCAAGCTCCTTAAGATGCACAGTCAGGGCTTCTTGTCCTGTTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGCAGCTGCGCTAGGTTaGAAACACATATTCGATGTC +
Preference number: 4 (lower is better)
Translates to: LLVGSAAALGWKHIFDVTAAALG*KHIFDV
Trigger: GACATCGAATATGTGTTTCCAACCTAGCGCAGCTGC...GGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR CCA 90 bp AAAGATCAATTTCCCCTGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCAGCAGGGGGAAGGGTTaGAGTCTGAAATACACTGAT +
Preference number: 4 (lower is better)
Translates to: KDQFPLVQEGQPARHLICSRGKG*SLKYTD
Trigger: ATCAGTGTATTTCAGACTCCAACCCTTCCCCCTGCT...GCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCAGGGGAAATTGATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp GTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCATGTGGAGGGAGCGGATaGGCCAGGCAGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VSETLFALYLLYSHFKLACGGSG*ARQQGL
Trigger: GAGACCCTGCTGCCTGGCCCATCCGCTCCCTCCACA...TGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp GTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCACCCTCTTGGCCGACATaGTGGAGGAGGCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VSETLFALYLLYSHFKLAPSWPT*WRRPGC
Trigger: ACACCCTGGCCTCCTCCATCATGTCGGCCAAGAGGG...TGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCAATTCTTTCCCATCAGCCTaGGTTCCTGCTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QGQKQELNQKNKSCRRVNSFPSA*VPAAPL
Trigger: CAAAGGAGCAGCAGGAACTCAGGCTGATGGGAAAGA...ATTGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp TATTTAACAGGACAAGAAGCCCTGACTGTGCATCTTAAGGAGCTTGGAGGTGATTCAGCAAATGACCCCTaGCTCCTGGTCACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: YLTGQEALTVHLKELGGDSANDP*LLVTSP
Trigger: TGGGGAAGTGACCAGGAGTCAGGGGTCATTTGCTGA...ATCACCTCCAAGCTCCTTAAGATGCACAGTCAGGGCTTCTTGTCCTGTTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR TCA 90 bp CATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTGGACAACAAGGCACCTaGTCGAGAAAAGGCACATCT +
Preference number: 4 (lower is better)
Translates to: HSSSFKLKPKNHTQGRTVGQQGT*SRKGTS
Trigger: AGATGTGCCTTTTCTCGATCAGGTGCCTTGTTGTCC...AACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp ACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTAAACCTTCAAGGGGGTaGGAAGGGTGGATCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TPRAGQFLKHCLLCIFFTKPSRG*EGWIPR
Trigger: TCTGGGGATCCACCCTTCTCACCCCCTTGAAGGTTT...AGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp TTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCATGTTTTCTTCAATTCTaGCCTCTTGGCCGACATGAT +
Preference number: 4 (lower is better)
Translates to: LPPCGGVEASWSSTCRKSCFLQF*PLGRHD
Trigger: ATCATGTCGGCCAAGAGGGCAGAATTGAAGAAAACA...TGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp CTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCCAATTCCAGGCAAACTaGCTTGTAGTTCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLVGSAAALGWKHIFDVTQFQAN*LVVLAQ
Trigger: CTGAGCAAGAACTACAAGGCAGTTTGCCTGGAATTG...GGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp ACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCAATCAGCCTGAGTTCCTaGTGCTCCTTTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TRVKSRNSIRRTRAAEGSISLSS*CSFGAL
Trigger: AAGAGCACCAAAGGAGCAGCAGGAACTCAGGCTGAT...TGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp TCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCTGAAACAGTGAAGAGCACAGGGTaGTCCATTGACTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: SFKLKPKNHTQGRTVSETVKSTG*SIDSTG
Trigger: GCCAGTGGAGTCAATGGAGCACCCTGTGCTCTTCAC...TGTTTCAGAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CTGCCGCACCTGTTACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGTGTTTTGGTCGGCTCTaGCTTCAATTCCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: LPHLLPGSKAGTQSEEQECFGRL*LQFQAN
Trigger: GTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAACA...CTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGTAACAGGTGCGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CCA 90 bp CAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTGGCCCACAGAAGGTTaGGTGGTCACTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QGRTVSETLFALYLLYSHWPTEG*VVTGSS
Trigger: AGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCA...ATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AATATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCTCAGTCTGGGACTTTaGGGCAGGCACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: NMKSHHSSSFKLKPKNHTLSLGL*GRHSVA
Trigger: GGCCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAG...GGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AAGGAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAACTCTCATTTCAAGCTaGCAGTTAAGCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: KELGGDESELLVGSAAALTLISS*QLSFTF
Trigger: GAAGGTGAAGCTTAACTGCCAGCTTGAAATGAGAGT...TAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCACAAGGAAGAAAGGCATaGCTGTTTTATCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LPPCGGVEASWSSTCRKSQGRKA*LFYLLH
Trigger: ATGGAGGAGATAAAACAGCCATGCCTTTCTTCCTTG...TGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR TCA 90 bp CCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACCTTCTCTCACTTCCCTaGGTTCATTCTTTAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PSFLVLQIEAKESHPGQDLLSLP*VHSLGP
Trigger: AGGACCTAAAGAATGAACTCAGGGAAGTGAGAGAAG...GTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319416.7
ENST00000367641.7
CDS-3UTR TCA 90 bp TATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAAGGAGGGGTGTGATGTaGATGCGGCTGGGAGCACAT +
Preference number: 4 (lower is better)
Translates to: YEIPSFLVLQIEAKESHPRRGVM*MRLGAH
Trigger: ATGTGCTCCCAGCCGCATTCACATCACACCCCTCCT...TGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCAATCTGCCACGTATCCTGTaGCCTCAGACAGATTATGCT +
Preference number: 4 (lower is better)
Translates to: QGQKQELNQKNKSCRRVNLPRIL*PQTDYA
Trigger: AGCATAATCTGTCTGAGGTCACAGGATACGTGGCAG...ATTGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp TCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCTGAAATCAGCCTGAGTTCCTaGTGCTCCTTTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SSFKLKPKNHTQGRTVSEISLSS*CSFGAL
Trigger: AAGAGCACCAAAGGAGCAGCAGGAACTCAGGCTGAT...TTCAGAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp TCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCTGAAGGTAGGTTCTGCAGCTaGGCTAGGTTGGAAACACAT +
Preference number: 4 (lower is better)
Translates to: SSFKLKPKNHTQGRTVSEGRFCS*ARLETH
Trigger: ATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACC...TTCAGAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp ACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTTGGGCCTGAGCTGTaGTTCTCTGTGAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TPRAGQFLKHCLLCIFFTLGPEL*FSVSLS
Trigger: GGAAAGACTCACAGAGAACCACAGCTCAGGCCCAAG...AGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCACCACAGAAGGTTGGGTaGTCACTGGCTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: YEIPSFLVLQIEAKESHPPQKVG*SLAPLH
Trigger: GTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGG...TGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCACACCTTCCCTCAGTCTaGGACTTTGGGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: YEIPSFLVLQIEAKESHPHLPSV*DFGAGT
Trigger: TGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTG...TGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp AAACATTTCTCCTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTGACTCCTCCAAGAGTCTaGGTGTCCTTCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KHFSCRGQKRHKKDQFPLTPPRV*VSFLLW
Trigger: CCAAAGCAGGAAGGACACCCAGACTCTTGGAGGAGT...CAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAGGAGAAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CCA 90 bp TCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGTTATAAGAGGGTGGAGCTaGCGGGTAGGCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SETLFALYLLYSHFKLAVIRGWS*RVGPSR
Trigger: CCTGGATGGGCCTACCCGCCAGCTCCACCCTCTTAT...AACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CACCTGATCGAGAAAAGGCACATCTTGTATGAATCTACCTACCCCGATTGTAGTCCAAGTCCTCCTTCCTaGTGCCACATCCTGTATGAC +
Preference number: 4 (lower is better)
Translates to: HLIEKRHILYESTYPDCSPSPPS*CHILYD
Trigger: GTCATACAGGATGTGGCACCAGGAAGGAGGACTTGG...ACTACAATCGGGGTAGGTAGATTCATACAAGATGTGCCTTTTCTCGATCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp CAAAGAATCACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCGTGAATATTTCCCACTaGATGGGGAGAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QRITPRAGQFLKHCLLCIVNISH*MGRKGR
Trigger: CCTGCCCTTTCTCCCCATCCAGTGGGAAATATTCAC...GATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGTGATTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGCAGACCCAGGTGGAATaGAGGGAGGTGGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: FLKHCLLCIFFTLISSWQQTQVE*REVVVG
Trigger: CCCAACCACCACCTCCCTCCATTCCACCTGGGTCTG...CTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp AATATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCACAGGGTGCTCCATTaGCTCCACTGGCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: NMKSHHSSSFKLKPKNHTHRVLH*LHWLHP
Trigger: TGGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTG...GGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACGGGCAGGACAGTTTCTaGAACACTGTTTGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: HTQGRTVSETLFALYLLYGQDSF*NTVCSV
Trigger: TACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCC...GTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TGGTGTGAAATAAAATATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCACCTCAGGAGGGGTGTaGTGTGAATGCGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WCEIKYEIPSFLVLQIEATSGGV*CECGWE
Trigger: CTCCCAGCCGCATTCACATCACACCCCTCCTGAGGT...GGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATATTTTATTTCACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp ACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCACAATTCCAGGCAAACTaGCTTGTAGTTCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TRVKSRNSIRRTRAAEGSQFQAN*LVVLAQ
Trigger: CTGAGCAAGAACTACAAGGCAGTTTGCCTGGAATTG...TGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp ATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGTCCTGTGTCACTCCTaGTTTGGTAAACCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: MKSHHSSSFKLKPKNHTQVLCHS*FGKPPF
Trigger: GAAGGGCGGTTTACCAAAGCAGGAGTGACACAGGAC...CTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319416.7
ENST00000367641.7
CDS-3UTR CCA 90 bp TCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGTTCCACAGAAGGTTGGGTaGTCACTGGCTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SETLFALYLLYSHFKLAVPQKVG*SLAPLH
Trigger: GTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGG...AACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGTTGACAGAATAAGAGGGTaGAGCTGGCGGGTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SETLFALYLLYSHFKLAVDRIRG*SWRVGP
Trigger: TGGGCCTACCCGCCAGCTCCACCCTCTTATTCTGTC...AACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp CAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCAATCCAGGAAACAGGTTCTaGAGTCAGAATGCTAGGATT +
Preference number: 4 (lower is better)
Translates to: QGQKQELNQKNKSCRRVNPGNRF*SQNARI
Trigger: AATCCTAGCATTCTGACTTCAGAACCTGTTTCCTGG...ATTGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp GGAGCACATGGCCTTGGGGACAACAAGGCACCTGATCGAGAAAAGGCACATCTTCCCTTCTTGTTTAACTaGTTTGTAATCAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: GAHGLGDNKAPDREKAHLPFLFN*FVIKCL
Trigger: CAGACATTTGATTACAAAGCAGTTAAACAAGAAGGG...AAGATGTGCCTTTTCTCGATCAGGTGCCTTGTTGTCCCCAAGGCCATGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR GCA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATCAGAAGAACAAGAGCTaGAGAAGGGTCAATAGAATT +
Preference number: 4 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNQKNKS*RRVNRI
Trigger: AATTCTATTGACCCTTCTGCAGCTCTTGTTCTTCTG...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR GCA 90 bp CTGCCGCACCTGTTACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGGTACTCATTAAAAGATaGAAACAGGCTGGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: LPHLLPGSKAGTQSEEQEVLIKR*KQAGCK
Trigger: CTTACACCCAGCCTGTTTGCATCTTTTAATGAGTAC...CTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGTAACAGGTGCGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CCA 90 bp ACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTTGTTTTGGTCGGCTCTaGCTTCAATTCCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: TPRAGQFLKHCLLCIFFTCFGRL*LQFQAN
Trigger: GTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAACA...AGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319416.7
ENST00000367641.7
CDS-3UTR CCA 90 bp CCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCAAGGGCTTCTTACTTTaGTCGGCTCTGGCTTCAATT +
Preference number: 4 (lower is better)
Translates to: PRAGQFLKHCLLCIFFTLKGFLL*SALASI
Trigger: AATTGAAGCCAGAGCCGACCAAAGTAAGAAGCCCTT...GAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
3UTR CAA 72 bp GGGACAACAAGGCACCTGATCGAGAAAAGGCACATCTaGTATGAATCTACCTACCCCGATTGTAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GTTRHLIEKRHI*YESTYPDCSCS
Trigger: AGAACAACTACAATCGGGGTAGGTAGATTCATACAAGATGTGCCTTTTCTCGATCAGGTGCCTTGTTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp AAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGTTAAGCAGCTGTGGTTCTCTGTaGGTCTTTCCCATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KHCLLCIFFTLISSWQLSSCGSL*VFPISL
Trigger: CAGGCTGATGGGAAAGACTCACAGAGAACCACAGCT...GCTTAACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGAGCTGTGGTTCTCTGTaGGTCTTTCCCATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLKHCLLCIFFTLISSWQSCGSL*VFPISL
Trigger: CAGGCTGATGGGAAAGACTCACAGAGAACCACAGCT...CTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp ATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGGCAGGACAGTTTCTaGAACACTGTTTGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: MKSHHSSSFKLKPKNHTQGQDSF*NTVCSV
Trigger: TACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCC...CTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCTGAAACAAGCTTAGCAAAGAGATaGAACAAGGAGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SFKLKPKNHTQGRTVSETSLAKR*NKEELV
Trigger: CACCAGTTCCTCCTTGTTTCATCTCTTTGCTAAGCT...TGTTTCAGAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp AAACATTTCTCCTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTGAAGGCACATCTTGTATaGATCTACCTACCCCGATTG +
Preference number: 4 (lower is better)
Translates to: KHFSCRGQKRHKKDQFPLKAHLV*IYLPRL
Trigger: CAATCGGGGTAGGTAGATTCATACAAGATGTGCCTT...CAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAGGAGAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp ACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTAAGGCACATCTTGTATaGATCTACCTACCCCGATTG +
Preference number: 4 (lower is better)
Translates to: TPRAGQFLKHCLLCIFFTKAHLV*IYLPRL
Trigger: CAATCGGGGTAGGTAGATTCATACAAGATGTGCCTT...AGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp AATATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCACTGCTGGTAGGTTCTaGAGCTGCGCTAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: NMKSHHSSSFKLKPKNHTTAGRF*SCARLE
Trigger: TTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGT...GGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp AATATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCATGACCTGGGACGTTTaGAGACCCAGGTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: NMKSHHSSSFKLKPKNHTMTWDV*RPRWNG
Trigger: TCCATTCCACCTGGGTCTGCAAACGTCCCAGGTCAT...GGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGCCAAGTCCTCCTTCCTaGTGCCACATCCTGTATGAC +
Preference number: 4 (lower is better)
Translates to: FLKHCLLCIFFTLISSWQPSPPS*CHILYD
Trigger: GTCATACAGGATGTGGCACCAGGAAGGAGGACTTGG...CTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAATATTTCCCACTGGATaGGGAGAAAGGGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: YEIPSFLVLQIEAKESHPIFPTG*GERAGP
Trigger: AGGTCCTGCCCTTTCTCCCCATCCAGTGGGAAATAT...TGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp TCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCTGAACTGCCTTGTAGTTCTTaGTCAGATGTGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSFKLKPKNHTQGRTVSELPCSS*SDVFSS
Trigger: TGAAGAAAACACATCTGAGCAAGAACTACAAGGCAG...TTCAGAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp CAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATCAATTCCAGGCAAACTaGCTTGTAGTTCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QGRTVSETLFALYLLYSHQFQAN*LVVLAQ
Trigger: CTGAGCAAGAACTACAAGGCAGTTTGCCTGGAATTG...ATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR GCA 90 bp TCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGTTATCAGCCTGAGTTCCTaGTGCTCCTTTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SETLFALYLLYSHFKLAVISLSS*CSFGAL
Trigger: AAGAGCACCAAAGGAGCAGCAGGAACTCAGGCTGAT...AACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp TATTTAACAGGACAAGAAGCCCTGACTGTGCATCTTAAGGAGCTTGGAGGTGATACTCTCATTTCAAGCTaGCAGTTAAGCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: YLTGQEALTVHLKELGGDTLISS*QLSFTF
Trigger: GAAGGTGAAGCTTAACTGCCAGCTTGAAATGAGAGT...ATCACCTCCAAGCTCCTTAAGATGCACAGTCAGGGCTTCTTGTCCTGTTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR TCA 90 bp TTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGCCTCGTCCTTCAAATTaGAGCCAAAGAATCACACCC +
Preference number: 4 (lower is better)
Translates to: FLKHCLLCIFFTLISSWQPRPSN*SQRITP
Trigger: GGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGG...CTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp ATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGACTCTCATTTCAAGCTaGCAGTTAAGCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: MKSHHSSSFKLKPKNHTQTLISS*QLSFTF
Trigger: GAAGGTGAAGCTTAACTGCCAGCTTGAAATGAGAGT...CTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CCA 90 bp ACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTTGTAATCAAATGTTTTaGTCGGCTCTGGCTTCAATT +
Preference number: 4 (lower is better)
Translates to: TPRAGQFLKHCLLCIFFTCNQMF*SALASI
Trigger: AATTGAAGCCAGAGCCGACCAAAACATTTGATTACA...AGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319416.7
ENST00000367641.7
CDS-3UTR CCA 90 bp AAACATTTCTCCTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTGTGTAATCAAATGTTTTaGTCGGCTCTGGCTTCAATT +
Preference number: 4 (lower is better)
Translates to: KHFSCRGQKRHKKDQFPLCNQMF*SALASI
Trigger: AATTGAAGCCAGAGCCGACCAAAACATTTGATTACA...CAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAGGAGAAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367641.7
CDS-3UTR GCA 90 bp TCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAAGCTGGCAGTTTGTTTTCTTCAATTCTaGCCTCTTGGCCGACATGAT +
Preference number: 4 (lower is better)
Translates to: SETLFALYLLYSHFKLAVCFLQF*PLGRHD
Trigger: ATCATGTCGGCCAAGAGGGCAGAATTGAAGAAAACA...AACTGCCAGCTTGAAATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp GGCCACCTCAAAACGGTGCTTGCCTCCCTGCGGGGGTGTAGAAGCCTCTTGGAGACCTCAAAACGGTGCTaGCCTCCCTGCGGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: GHLKTVLASLRGCRSLLETSKRC*PPCGGV
Trigger: TACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGT...CTCCAAGAGGCTTCTACACCCCCGCAGGGAGGCAAGCACCGTTTTGAGGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CAA 90 bp CCGAGGTGGGAGGATCACTTGAGCTCACAAGGGGTTGGAGACCGGCCAAGGCAACATACCCAGGCTGCCTaGAACATGTGTGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PRWEDHLSSQGVGDRPRQHTQAA*NMCEAW
Trigger: CCAGGCCTCACACATGTTCAAGGCAGCCTGGGTATG...TTGCCTTGGCCGGTCTCCAACCCCTTGTGAGCTCAAGTGATCCTCCCACCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CAA 90 bp GAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTGCACAGGGTGCTCCATaGACTCCACTGGCTCCATCC +
Preference number: 5 (lower is better)
Translates to: ELGGDESELLVGSAAALGAQGAP*TPLAPS
Trigger: GGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTGC...ACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp GAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGGAGCACATGGCCTaGGGGACAACAAGGCACCTG +
Preference number: 5 (lower is better)
Translates to: ELGGDESELLVGSAAALGWEHMA*GTTRHL
Trigger: CAGGTGCCTTGTTGTCCCCAAGGCCATGTGCTCCCA...ACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp GGAGAGGAAACCTTCAAGGGGGTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGGGACCTGAGTCCTGCTaGGTGACAAGACCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: GEETFKGVRRVDPQNPRKGPESC*VTRPQR
Trigger: CCTCTGAGGTCTTGTCACCAAGCAGGACTCAGGTCC...CTTTCTTGGGTTCTGGGGATCCACCCTTCTCACCCCCTTGAAGGTTTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS TCA 90 bp AATGTCTGGGACAAATCTTGGCCACTAGGATCAGCAAATGACCCCTaGCTCCTGGTCACTTCCCCATGGATCTCAGGCCTGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: NVWDKSWPLGSANDP*LLVTSPWISGLAAC
Trigger: GCAGGCAGCCAGGCCTGAGATCCATGGGGAAGTGACCAGGAGTCAGGGGTCATTTGCTGATCCTAGTGGCCAAGATTTGTCCCAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS CCA 90 bp GACTCCTGGTCACTTCCCCATGGATCTCAGGCCTGGCTGCCTGCATaGCCTCAAAAGGGCTTCTTACTTTGGTCGGCTCTGGCTTCAATT +
Preference number: 5 (lower is better)
Translates to: DSWSLPHGSQAWLPA*PQKGFLLWSALASI
Trigger: AATTGAAGCCAGAGCCGACCAAAGTAAGAAGCCCTTTTGAGGCCATGCAGGCAGCCAGGCCTGAGATCCATGGGGAAGTGACCAGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CAA 90 bp GTGGAGGGAGCGGATGGGCCAGGCAGCAGGGTCTCTCCTGAGACCACACAGACTGGTAAACCGCCCTTCTaGTTTAACTGCTTTGTAATC +
Preference number: 5 (lower is better)
Translates to: VEGADGPGSRVSPETTQTGKPPF*FNCFVI
Trigger: GATTACAAAGCAGTTAAACAAGAAGGGCGGTTTACC...AGTCTGTGTGGTCTCAGGAGAGACCCTGCTGCCTGGCCCATCCGCTCCCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp CAAGTCCTCCTTCCTGGTGCCACATCCTGTATGACTGAGCATGCTGGGTGGCAGGCTCCATCCATTTTCTaGGGCCTGAGCTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: QVLLPGATSCMTEHAGWQAPSIF*GLSCGS
Trigger: AGAACCACAGCTCAGGCCCAAGAAAATGGATGGAGC...CTGCCACCCAGCATGCTCAGTCATACAGGATGTGGCACCAGGAAGGAGGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp AGCGTGGCCCACAGAAGGTTGGGTGGTCACTGGCTCCTCTCCACCTTTGTAAAGGCTCCATCCATTTTCTaGGGCCTGAGCTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: SVAHRRLGGHWLLSTFVKAPSIF*GLSCGS
Trigger: AGAACCACAGCTCAGGCCCAAGAAAATGGATGGAGC...CTTTACAAAGGTGGAGAGGAGCCAGTGACCACCCAACCTTCTGTGGGCCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp TCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTTGAGGTAGCACAGGGTGCTCCATaGACTCCACTGGCTCCATCC +
Preference number: 5 (lower is better)
Translates to: SAAALGWKHIFDVTGVEVAQGAP*TPLAPS
Trigger: GGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTGC...TACCTCAACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp GGGGTGAGAAGGGTGGATCCCCAGAACCCAAGAAAGCTACCCAGTTCCTATGAGAGTGGAGGCCTGGGGTaGGGGTGGTATTTAACAGGA +
Preference number: 5 (lower is better)
Translates to: GVRRVDPQNPRKLPSSYESGGLG*GWYLTG
Trigger: TCCTGTTAAATACCACCCCAACCCCAGGCCTCCACT...CTCATAGGAACTGGGTAGCTTTCTTGGGTTCTGGGGATCCACCCTTCTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp GAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTAGTGGAGGCCTGGGGTaGGGGTGGTATTTAACAGGA +
Preference number: 5 (lower is better)
Translates to: ELGGDESELLVGSAAALGSGGLG*GWYLTG
Trigger: TCCTGTTAAATACCACCCCAACCCCAGGCCTCCACT...ACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR CAA 90 bp CTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCTGGCCATGGAAGGCCTaGACTCCAAGTCACAGGGGC +
Preference number: 5 (lower is better)
Translates to: LLVGSAAALGWKHIFDVTWPWKA*TPSHRG
Trigger: GCCCCTGTGACTTGGAGTCAAGGCCTTCCATGGCCA...GGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CAA 90 bp GCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGAAGGAATGTTCCCTTaGGGGGTGGAGGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: AGRFCSCARLETHIRCHREGMFP*GVEGGR
Trigger: TCTCCCTCCCTCCACCCCCAAAGGGAACATTCCTTC...CCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp CTGCCGCACCTGTTACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGGCACAGGGTGCTCCATaGACTCCACTGGCTCCATCC +
Preference number: 5 (lower is better)
Translates to: LPHLLPGSKAGTQSEEQEAQGAP*TPLAPS
Trigger: GGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTGC...CTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGTAACAGGTGCGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CAA 90 bp AAAGATCAATTTCCCCTGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCGGACCTGAGTCCTGCTaGGTGACAAGACCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: KDQFPLVQEGQPARHLICGPESC*VTRPQR
Trigger: CCTCTGAGGTCTTGTCACCAAGCAGGACTCAGGTCC...GCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCAGGGGAAATTGATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS TCA 90 bp TCTTGCTCAGATGTGTTTTCTTCAATTCTGCCCTCTTGGCCGACATaGTGGAGGAGGCCAGGGTGTTCTTCAACTCCCCACAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: SCSDVFSSILPSWPT*WRRPGCSSTPHNSP
Trigger: GGGGCTGTTGTGGGGAGTTGAAGAACACCCTGGCCTCCTCCATCATGTCGGCCAAGAGGGCAGAATTGAAGAAAACACATCTGAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
ENST00000367643.7
ENST00000419909.6
CDS CCA 90 bp TCTCAGGCCTGGCTGCCTGCATGGCCTCAAAAGGGCTTCTTACTTTaGTCGGCTCTGGCTTCAATTCCAGGCAAACTGCCTTGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: SQAWLPAWPQKGFLL*SALASIPGKLPCSS
Trigger: AGAACTACAAGGCAGTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAGTAAGAAGCCCTTTTGAGGCCATGCAGGCAGCCAGGCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CAA 90 bp ATCAATTTCCCCTGGTCCAAGAAGGGCAGCCTGCTAGGCACCTTATCTGCCCTTTTCAATTCTGCCCTCTaGGCCGACATGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: INFPWSKKGSLLGTLSALFNSAL*ADMMEE
Trigger: CTCCTCCATCATGTCGGCCAAGAGGGCAGAATTGAA...AAGGGCAGATAAGGTGCCTAGCAGGCTGCCCTTCTTGGACCAGGGGAAATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp TTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCGCACAGGGTGCTCCATaGACTCCACTGGCTCCATCC +
Preference number: 5 (lower is better)
Translates to: FLVLQIEAKESHPGQDSFAQGAP*TPLAPS
Trigger: GGATGGAGCCAGTGGAGTCAATGGAGCACCCTGTGC...GAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp CGGCACCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGATACAGCACACCATGACATCCCCTTaGGCTTTGAATGAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: RHPEVSSGRTCPFTMIQHTMTSP*ALNEGF
Trigger: AAAACCTTCATTCAAAGCCAAAGGGGATGTCATGGT...GTGCTGTATCATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS TCA 90 bp GTAATCAAATGTCTGGGACAAATCTTGGCCACTAGGATCAGCAAATaGCCCCTGACTCCTGGTCACTTCCCCATGGATCTCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: VIKCLGQILATRISK*PLTPGHFPMDLRPG
Trigger: GCCAGGCCTGAGATCCATGGGGAAGTGACCAGGAGTCAGGGGTCATTTGCTGATCCTAGTGGCCAAGATTTGTCCCAGACATTTGATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS CCA 90 bp GGCTGCCTGCATGGCCTCAAAAGGGCTTCTTACTTTGGTCGGCTCTaGCTTCAATTCCAGGCAAACTGCCTTGTAGTTCTTGCTCAGATG +
Preference number: 5 (lower is better)
Translates to: GCLHGLKRASYFGRL*LQFQANCLVVLAQM
Trigger: CATCTGAGCAAGAACTACAAGGCAGTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAGTAAGAAGCCCTTTTGAGGCCATGCAGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CAA 90 bp CTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTGGTCCAAGAAGGAGTGGAGGCCTGGGGTaGGGGTGGTATTTAACAGGA +
Preference number: 5 (lower is better)
Translates to: LQRTETAQERSISPGPRRSGGLG*GWYLTG
Trigger: TCCTGTTAAATACCACCCCAACCCCAGGCCTCCACT...CCTTCTTGGACCAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp GAGCTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTAAAGGGCTTCTTACTTaGGTCGGCTCTGGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: ELGGDESELLVGSAAALGKGLLT*VGSGFN
Trigger: ATTGAAGCCAGAGCCGACCAAAGTAAGAAGCCCTTT...ACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CAA 90 bp CTTGGAGGTGATGAATCGGAACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGTGCAGCTGCGCTAGGTaGGAAACACATATTCGATGT +
Preference number: 5 (lower is better)
Translates to: LGGDESELLVGSAAALGWCSCAR*ETHIRC
Trigger: ACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCA...CCAACCTAGCGCAGCTGCAGAACCTACCAGCAGTTCCGATTCATCACCTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367641.7
ENST00000367642.3
ENST00000442872.1
CDS-3UTR CAA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATAGGTGGGAGGATCACTaGAGCTCACAAGGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNRWEDH*SSQGVG
Trigger: TCCAACCCCTTGTGAGCTCAAGTGATCCTCCCACCT...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CAA 90 bp GTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACCGGGGTTGCACCTTATCTGCCCTaGCTAAAGGGAAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: VGSAAALGWKHIFDVTGVAPYLP*LKGRTE
Trigger: TTCTGTCCTTCCCTTTAGCAAGGGCAGATAAGGTGC...AACCCCGGTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp TATTTAACAGGACAAGAAGCCCTGACTGTGCATCTTAAGGAGCTTGGAGGTGATTGGGAGCACATGGCCTaGGGGACAACAAGGCACCTG +
Preference number: 5 (lower is better)
Translates to: YLTGQEALTVHLKELGGDWEHMA*GTTRHL
Trigger: CAGGTGCCTTGTTGTCCCCAAGGCCATGTGCTCCCA...ATCACCTCCAAGCTCCTTAAGATGCACAGTCAGGGCTTCTTGTCCTGTTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp CCCAGAAGTCAGCAGCGGGCGGACCTGTCCCTTCACTATGATACAGCACAAGCTACCATGACATCCCCTTaGGCTTTGAATGAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: PRSQQRADLSLHYDTAQATMTSP*ALNEGF
Trigger: AAAACCTTCATTCAAAGCCAAAGGGGATGTCATGGT...AGCTTGTGCTGTATCATAGTGAAGGGACAGGTCCGCCCGCTGCTGACTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATTGTGTCACTCCTGCTTaGGTAAACCGCCCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNCVTPA*VNRPSC
Trigger: ACAAGAAGGGCGGTTTACCAAAGCAGGAGTGACACA...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CAA 90 bp ACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCAGCTCCATCCATTTTCTaGGGCCTGAGCTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: TRVKSRNSIRRTRAAEGSAPSIF*GLSCGS
Trigger: AGAACCACAGCTCAGGCCCAAGAAAATGGATGGAGC...TGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CAA 90 bp TTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACAGTTTCGGTGTCCTTCCTGCTTaGGTAAACCGCCCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: FLVLQIEAKESHPGQDSFGVLPA*VNRPSC
Trigger: ACAAGAAGGGCGGTTTACCAAAGCAGGAAGGACACC...GAAACTGTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CAA 90 bp AGTTGGGGAGACATTTTGCAGCATGACAAGGAGATAACCAGTACACGGGTGGCCTGCAGCTGCGCTAGGTaGGAAACACATATTCGATGT +
Preference number: 5 (lower is better)
Translates to: SWGDILQHDKEITSTRVACSCAR*ETHIRC
Trigger: ACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCA...GGCCACCCGTGTACTGGTTATCTCCTTGTCATGCTGCAAAATGTCTCCCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CAA 90 bp ACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTGAAGGAATGTTCCCTTaGGGGGTGGAGGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: TPRAGQFLKHCLLCIFFTEGMFP*GVEGGR
Trigger: TCTCCCTCCCTCCACCCCCAAAGGGAACATTCCTTC...AGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp CAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCAATTTCAATTCTGCCCTCTaGGCCGACATGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: QGQKQELNQKNKSCRRVNFNSAL*ADMMEE
Trigger: CTCCTCCATCATGTCGGCCAAGAGGGCAGAATTGAA...ATTGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CAA 90 bp CAAAGAATCACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCGCTCCATCCATTTTCTaGGGCCTGAGCTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: QRITPRAGQFLKHCLLCIAPSIF*GLSCGS
Trigger: AGAACCACAGCTCAGGCCCAAGAAAATGGATGGAGC...GATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGTGATTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp CTGCAGAGGACAGAAACGGCACAAGAAAGATCAATTTCCCCTGGTCCAAGAAGGTGCAGCTGCGCTAGGTaGGAAACACATATTCGATGT +
Preference number: 5 (lower is better)
Translates to: LQRTETAQERSISPGPRRCSCAR*ETHIRC
Trigger: ACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCA...CCTTCTTGGACCAGGGGAAATTGATCTTTCTTGTGCCGTTTCTGTCCTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp CACACCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACGCACCTTATCTGCCCTaGCTAAAGGGAAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: HTQGRTVSETLFALYLLYAPYLP*LKGRTE
Trigger: TTCTGTCCTTCCCTTTAGCAAGGGCAGATAAGGTGC...GTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp ACTGCTGGTAGGTTCTGCAGCTGCGCTAGGTTGGAAACACATATTCGATGTCACGAGAAAAGGCACATCTaGTATGAATCTACCTACCCC +
Preference number: 5 (lower is better)
Translates to: TAGRFCSCARLETHIRCHEKRHI*YESTYP
Trigger: GGGGTAGGTAGATTCATACAAGATGTGCCTTTTCTC...GTGACATCGAATATGTGTTTCCAACCTAGCGCAGCTGCAGAACCTACCAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp CCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCAGGGCAGGACGAGAAAAGGCACATCTaGTATGAATCTACCTACCCC +
Preference number: 5 (lower is better)
Translates to: PSFLVLQIEAKESHPGQDEKRHI*YESTYP
Trigger: GGGGTAGGTAGATTCATACAAGATGTGCCTTTTCTC...GTCCTGCCCTGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp ACCAGGGTCAAAAGCAGGAACTCAATCAGAAGAACAAGAGCTGCAGAAGGGTCACGCCTCATGATGGGATaGAAACCCAGCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: TRVKSRNSIRRTRAAEGSRLMMG*KPSFFF
Trigger: GAAAAAGAAGCTGGGTTTCAATCCCATCATGAGGCG...TGACCCTTCTGCAGCTCTTGTTCTTCTGATTGAGTTCCTGCTTTTGACCCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CAA 90 bp CAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCATTTCAATTCTGCCCTCTaGGCCGACATGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: QGRTVSETLFALYLLYSHFNSAL*ADMMEE
Trigger: CTCCTCCATCATGTCGGCCAAGAGGGCAGAATTGAA...ATGAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS GCA 90 bp TCTGGGTGTCCTTCCTGCTTTGGTAAACCGCCCTTCTTGTTTAACTaGTTTGTAATCAAATGTCTGGGACAAATCTTGGCCACTAGGATC +
Preference number: 5 (lower is better)
Translates to: SGCPSCFGKPPFLFN*FVIKCLGQILATRI
Trigger: GATCCTAGTGGCCAAGATTTGTCCCAGACATTTGATTACAAAGCAGTTAAACAAGAAGGGCGGTTTACCAAAGCAGGAAGGACACCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS-3UTR CAA 90 bp CCCAGGGCAGGACAGTTTCTGAAACACTGTTTGCTCTGTATCTTCTTTACTCTCGGTAAACCGCCCTTCTaGTTTAACTGCTTTGTAATC +
Preference number: 5 (lower is better)
Translates to: PRAGQFLKHCLLCIFFTLGKPPF*FNCFVI
Trigger: GATTACAAAGCAGTTAAACAAGAAGGGCGGTTTACC...GAGAGTAAAGAAGATACAGAGCAAACAGTGTTTCAGAAACTGTCCTGCCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
CDS-3UTR CAA 90 bp TATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCCATGTGTCACTCCTGCTTaGGTAAACCGCCCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: YEIPSFLVLQIEAKESHPCVTPA*VNRPSC
Trigger: ACAAGAAGGGCGGTTTACCAAAGCAGGAGTGACACA...TGGGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319416.7
ENST00000367641.7
CDS-3UTR CAA 90 bp TGCGGGGGTGTAGAAGCCTCTTGGAGCAGCACTTGTAGAAAATCAAGTCCCAATAAAGACCTCATGGTTTaGTTTTTAAGCTTAGGTAGG +
Preference number: 5 (lower is better)
Translates to: CGGVEASWSSTCRKSSPNKDLMV*FLSLGR
Trigger: CCTACCTAAGCTTAAAAACAAAACCATGAGGTCTTT...ATTGGGACTTGATTTTCTACAAGTGCTGCTCCAAGAGGCTTCTACACCCCCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000419909.6
CDS-3UTR CAA 90 bp AATATGAAATCCCATCATTCCTCGTCCTTCAAATTGAAGCCAAAGAATCACACCTGTGTCACTCCTGCTTaGGTAAACCGCCCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: NMKSHHSSSFKLKPKNHTCVTPA*VNRPSC
Trigger: ACAAGAAGGGCGGTTTACCAAAGCAGGAGTGACACA...GGTGTGATTCTTTGGCTTCAATTTGAAGGACGAGGAATGATGGGATTTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319416.7
ENST00000367641.7
CDS CCA 72 bp CCTGACTCCTGGTCACTTCCCCATGGATCTCAGGCCTaGCTGCCTGCATGGCCTCAAAAGGGCTTCTTACTT +
Preference number: 6 (lower is better)
Translates to: PDSWSLPHGSQA*LPAWPQKGFLL
Trigger: AAGTAAGAAGCCCTTTTGAGGCCATGCAGGCAGCCAGGCCTGAGATCCATGGGGAAGTGACCAGGAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS GCA 72 bp ACTCCTGGTCACTTCCCCATGGATCTCAGGCCTGGCTaGCTGCATGGCCTCAAAAGGGCTTCTTACTTTGGT +
Preference number: 6 (lower is better)
Translates to: TPGHFPMDLRPG*LHGLKRASYFG
Trigger: ACCAAAGTAAGAAGCCCTTTTGAGGCCATGCAGGCAGCCAGGCCTGAGATCCATGGGGAAGTGACCAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS CAA 72 bp CTGGCTGCCTGCATGGCCTCAAAAGGGCTTCTTACTTaGGTCGGCTCTGGCTTCAATTCCAGGCAAACTGCC +
Preference number: 6 (lower is better)
Translates to: LAACMASKGLLT*VGSGFNSRQTA
Trigger: GGCAGTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAGTAAGAAGCCCTTTTGAGGCCATGCAGGCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS TCA 72 bp GACAAATCTTGGCCACTAGGATCAGCAAATGACCCCTaGCTCCTGGTCACTTCCCCATGGATCTCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: DKSWPLGSANDP*LLVTSPWISGL
Trigger: CAGGCCTGAGATCCATGGGGAAGTGACCAGGAGTCAGGGGTCATTTGCTGATCCTAGTGGCCAAGATTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS CCA 72 bp TGGCTGCCTGCATGGCCTCAAAAGGGCTTCTTACTTTaGTCGGCTCTGGCTTCAATTCCAGGCAAACTGCCT +
Preference number: 6 (lower is better)
Translates to: WLPAWPQKGFLL*SALASIPGKLP
Trigger: AGGCAGTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAGTAAGAAGCCCTTTTGAGGCCATGCAGGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS TCA 72 bp TGTCTGGGACAAATCTTGGCCACTAGGATCAGCAAATaGCCCCTGACTCCTGGTCACTTCCCCATGGATCTC +
Preference number: 6 (lower is better)
Translates to: CLGQILATRISK*PLTPGHFPMDL
Trigger: GAGATCCATGGGGAAGTGACCAGGAGTCAGGGGTCATTTGCTGATCCTAGTGGCCAAGATTTGTCCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS CCA 72 bp GCTCCAGAAGCCAAGGGTGAAAAGGGTGCCCAGACCTaGTGTGAATATTTCCCACCCGATTGTAGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: APEAKGEKGAQT*CEYFPPDCSCS
Trigger: AGAACAACTACAATCGGGTGGGAAATATTCACACCAGGTCTGGGCACCCTTTTCACCCTTGGCTTCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442872.1
CDS GCA 72 bp CTTGTAGTTCTTGCTCAGATGTGTTTTCTTCAATTCTaGCCTCTTGGCCGACATGATGGAGGAGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: LVVLAQMCFLQF*PLGRHDGGGQG
Trigger: ACCCTGGCCTCCTCCATCATGTCGGCCAAGAGGGCAGAATTGAAGAAAACACATCTGAGCAAGAACTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367642.3
ENST00000367643.7
ENST00000419909.6
CDS GCA 72 bp TGTTTTGGTCGGCTCTGGCTTCAATTCCAGGCAAACTaGCTTGTAGTTCTTGCTTGTCCAGCAATGTCTCTC +
Preference number: 6 (lower is better)
Translates to: CFGRLWLQFQAN*LVVLACPAMSL
Trigger: GAGAGACATTGCTGGACAAGCAAGAACTACAAGGCAGTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367639.1
CDS CCA 72 bp CATGGCCTCAAAAGGGCTTCTTACTTTGGTCGGCTCTaGCTTCAATTCCAGGCAAACTGCCTTGTAGTTCTT +
Preference number: 6 (lower is better)
Translates to: HGLKRASYFGRL*LQFQANCLVVL
Trigger: AAGAACTACAAGGCAGTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAGTAAGAAGCCCTTTTGAGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS CAA 90 bp CTCCAAGAGTCTGGGTGTCCTTCCTGCTTTGGTAAACCGCCCTTCTaGTTTAACTGCTTTGTAATCAAATGTCTGGGACAAATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LQESGCPSCFGKPPF*FNCFVIKCLGQILA
Trigger: GGCCAAGATTTGTCCCAGACATTTGATTACAAAGCAGTTAAACAAGAAGGGCGGTTTACCAAAGCAGGAAGGACACCCAGACTCTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS GCA 72 bp TGTTTTGGTCGGCTCTGGCTTCAATTCCAGGCAAACTaGCTTGTAGTTCTTGCTCAGATGTGTTTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: CFGRLWLQFQAN*LVVLAQMCFLQ
Trigger: TTGAAGAAAACACATCTGAGCAAGAACTACAAGGCAGTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319416.7
ENST00000367641.7
ENST00000367643.7
ENST00000419909.6
CDS GCA 72 bp TACTTTGGTCGGCTCTGGCTTCAATTCCAGGCAAACTaGCTTGTAGTTCTTGCTCAGATGTGTTTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: YFGRLWLQFQAN*LVVLAQMCFLQ
Trigger: TTGAAGAAAACACATCTGAGCAAGAACTACAAGGCAGTTTGCCTGGAATTGAAGCCAGAGCCGACCAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS CAA 72 bp TCTGGGTGTCCTTCCTGCTTTGGTAAACCGCCCTTCTaGTTTAACTGCTTTGTAATCAAATGTCTGGGACAA +
Preference number: 6 (lower is better)
Translates to: SGCPSCFGKPPF*FNCFVIKCLGQ
Trigger: TTGTCCCAGACATTTGATTACAAAGCAGTTAAACAAGAAGGGCGGTTTACCAAAGCAGGAAGGACACCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367642.3
CDS CAA 90 bp AACAAGGAAGAAAGGCATGGCTGTTTTATCTCCTCCATTTTCTCCTaGAGCTCTTCTCTCACTTCCCTGAGTTCATTCTTTAGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: NKEERHGCFISSIFS*SSSLTSLSSFFRSC
Trigger: ACAGGACCTAAAGAATGAACTCAGGGAAGTGAGAGAAGAGCTCAAGGAGAAAATGGAGGAGATAAAACAGCCATGCCTTTCTTCCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419909.6