Pregenerated sensors for TEX33 (Homo sapiens)
Ensembl gene IDs: ENSG00000185264Ensembl transcript IDs: ENST00000381821.2, ENST00000402860.7, ENST00000405091.6, ENST00000442538.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTCGAGGAGGATCGAGAGCCCGCATTCTTCAGGGACCTGGACTGTaGGTCCATGCCCAGAGAATCCCTGCTGGCAGCAGTCGGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SRGGSRARILQGPGL*VHAQRIPAGSSRGW Trigger: CCACCCCCGACTGCTGCCAGCAGGGATTCTCTGGGCATGGACCCACAGTCCAGGTCCCTGAAGAATGCGGGCTCTCGATCCTCCTCGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS CCA 90 bp | TCTTCAGGGACCTGGACTGTGGGTCCATGCCCAGAGAATCCCTGCTaGCAGCAGTCGGGGGTGGAGGGGGAATCTCCTTCAAGTGGCACT | + |
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Preference number: 5 (lower is better) Translates to: SSGTWTVGPCPENPC*QQSGVEGESPSSGT Trigger: AGTGCCACTTGAAGGAGATTCCCCCTCCACCCCCGACTGCTGCCAGCAGGGATTCTCTGGGCATGGACCCACAGTCCAGGTCCCTGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS GCA 90 bp | CTTAGTCCTGACGTGCCCACGGCAGCTCTGTACGTCCCAGTGCACTaGCAGTCCACAGCAGTCTGGACGGGCTACAATGGAAGTGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LSPDVPTAALYVPVH*QSTAVWTGYNGSVD Trigger: GTCCACACTTCCATTGTAGCCCGTCCAGACTGCTGTGGACTGGCAGTGCACTGGGACGTACAGAGCTGCCGTGGGCACGTCAGGACTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405091.6 |
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| CDS GCA 90 bp | CCAAGCTTAGTCCTGACGTGCCCACGGCAGCTCTGTACGTCCCAGTaGACTGCCAGTCCACAGCAGTCTGGACGGGCTACAATGGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: PSLVLTCPRQLCTSQ*TASPQQSGRATMEV Trigger: CACTTCCATTGTAGCCCGTCCAGACTGCTGTGGACTGGCAGTGCACTGGGACGTACAGAGCTGCCGTGGGCACGTCAGGACTAAGCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405091.6 |
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| CDS CCA 90 bp | GCTTTCCAGGGGTCCAAGTCCTGTTGGCCCTCCTTGTCATTCAGATaGGCCCTGGTGAAAGTGGTTGTACCTGCTCCGTGGCCCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AFQGSKSCWPSLSFR*ALVKVVVPAPWPSS Trigger: GGAGCTGGGCCACGGAGCAGGTACAACCACTTTCACCAGGGCCCATCTGAATGACAAGGAGGGCCAACAGGACTTGGACCCCTGGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381821.2 ENST00000405091.6 |
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| CDS CCA 90 bp | TGTTCTCTCTCGAGGAGGATCGAGAGCCCGCATTCTTCAGGGACCTaGACTGTGGGTCCATGCCCAGAGAATCCCTGCTGGCAGCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: CSLSRRIESPHSSGT*TVGPCPENPCWQQS Trigger: CGACTGCTGCCAGCAGGGATTCTCTGGGCATGGACCCACAGTCCAGGTCCCTGAAGAATGCGGGCTCTCGATCCTCCTCGAGAGAGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS GCA 90 bp | GTGAAAGTGGTTGTACCTGCTCCGTGGCCCAGCTCCATAGCCTCTTaGTGTGGGACAGGCAATTCCAAGCTTAGTCCTGACGTGCCCACG | + |
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Preference number: 5 (lower is better) Translates to: VKVVVPAPWPSSIAS*CGTGNSKLSPDVPT Trigger: CGTGGGCACGTCAGGACTAAGCTTGGAATTGCCTGTCCCACAGCAAGAGGCTATGGAGCTGGGCCACGGAGCAGGTACAACCACTTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405091.6 |
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| CDS CCA 90 bp | ACGGCAGCTCTGTACGTCCCAGTGCACTGCCAGTCCACAGCAGTCTaGACGGGCTACAATGGAAGTGTGGACTCACTTCCAGTTTCTCAC | + |
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Preference number: 5 (lower is better) Translates to: TAALYVPVHCQSTAV*TGYNGSVDSLPVSH Trigger: GTGAGAAACTGGAAGTGAGTCCACACTTCCATTGTAGCCCGTCCAGACTGCTGTGGACTGGCAGTGCACTGGGACGTACAGAGCTGCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405091.6 |
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| CDS GCA 90 bp | GTCATTCAGATGGGCCCTGCTCCGTGGCCCAGCTCCATAGCCTCTTaGTGTGGGACAGGCAATTCCAAGCTTAGTCCTCTCCAATCTCTT | + |
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Preference number: 5 (lower is better) Translates to: VIQMGPAPWPSSIAS*CGTGNSKLSPLQSL Trigger: AAGAGATTGGAGAGGACTAAGCTTGGAATTGCCTGTCCCACAGCAAGAGGCTATGGAGCTGGGCCACGGAGCAGGGCCCATCTGAATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402860.7 |
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| CDS CCA 90 bp | TGCTCCTCGGAGACCAGCTGGTCCACCACATTGCTCCCAAACTTGTaGCGAATGTTGTTAGGAATGATGCTGCCCTTCTGGTTCGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: CSSETSWSTTLLPNL*RMLLGMMLPFWFVG Trigger: GCCCACGAACCAGAAGGGCAGCATCATTCCTAACAACATTCGCCACAAGTTTGGGAGCAATGTGGTGGACCAGCTGGTCTCCGAGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS CCA 90 bp | CGTCCCAGTGCACTGCCAGTCCACAGCAGTCTGGACGGGCTACAATaGAAGTGTGGACTCACTTCCAGTTTCTCACCTCTCCAATCTCTT | + |
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Preference number: 5 (lower is better) Translates to: RPSALPVHSSLDGLQ*KCGLTSSFSPLQSL Trigger: AAGAGATTGGAGAGGTGAGAAACTGGAAGTGAGTCCACACTTCCATTGTAGCCCGTCCAGACTGCTGTGGACTGGCAGTGCACTGGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405091.6 |
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| CDS TCA 90 bp | GAAGACGGAGGAGATTTCCACAGGATTCTGGGTCCTGCTGGGCCATaGGCTTGCCCTTTTCTGGCCCTCGAAGACTTCATCAATAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: EDGGDFHRILGPAGP*ACPFLALEDFINSL Trigger: AAGGCTATTGATGAAGTCTTCGAGGGCCAGAAAAGGGCAAGCTCATGGCCCAGCAGGACCCAGAATCCTGTGGAAATCTCCTCCGTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS GCA 90 bp | GTGAAAGTGGTTGTACCTGCTCCGTGGCCCAGCTCCATAGCCTCTTaGTGTGGGACAGGCAATTCCAAGCTTAGTCCTCTCCAATCTCTT | + |
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Preference number: 5 (lower is better) Translates to: VKVVVPAPWPSSIAS*CGTGNSKLSPLQSL Trigger: AAGAGATTGGAGAGGACTAAGCTTGGAATTGCCTGTCCCACAGCAAGAGGCTATGGAGCTGGGCCACGGAGCAGGTACAACCACTTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381821.2 |
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| CDS GCA 90 bp | AGTAGTCTGAGAAGACGGAGGAGATTTCCACAGGATTCTGGGTCCTaGTGGGCCATGAGCTTGCCCTTTTCTGGCCCTCGAAGACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SSLRRRRRFPQDSGS*WAMSLPFSGPRRLH Trigger: ATGAAGTCTTCGAGGGCCAGAAAAGGGCAAGCTCATGGCCCAGCAGGACCCAGAATCCTGTGGAAATCTCCTCCGTCTTCTCAGACTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS CCA 90 bp | AGTCTGAGAAGACGGAGGAGATTTCCACAGGATTCTGGGTCCTGCTaGGCCATGAGCTTGCCCTTTTCTGGCCCTCGAAGACTTCATCAA | + |
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Preference number: 5 (lower is better) Translates to: SLRRRRRFPQDSGSC*AMSLPFSGPRRLHQ Trigger: TTGATGAAGTCTTCGAGGGCCAGAAAAGGGCAAGCTCATGGCCCAGCAGGACCCAGAATCCTGTGGAAATCTCCTCCGTCTTCTCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS GCA 90 bp | GCATTTTTCTGGTGCCACCGCCCCAGATCATCCGTCTTCCTGCCATaGCAGTGTTCTAAGTCCCTCACTGATTTCTCAATGACCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: AFFWCHRPRSSVFLP*QCSKSLTDFSMTSG Trigger: ACCAGAGGTCATTGAGAAATCAGTGAGGGACTTAGAACACTGGCATGGCAGGAAGACGGATGATCTGGGGCGGTGGCACCAGAAAAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS TCA 90 bp | CAGTTTCTCACCTCTCCAATCTCTTTCATAACAGCAGGAAACACGTaGACCACACTGATGTGTGCTGAAGCCCAGAAGTGCAGATCCCCA | + |
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Preference number: 5 (lower is better) Translates to: QFLTSPISFITAGNT*TTLMCAEAQKCRSP Trigger: TGGGGATCTGCACTTCTGGGCTTCAGCACACATCAGTGTGGTTCACGTGTTTCCTGCTGTTATGAAAGAGATTGGAGAGGTGAGAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405091.6 |
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| CDS CCA 90 bp | AGTAGAAGACACCTCTACTGTGTCAAAACTAGTACTTGGAGCTCTTaGATTTGCTGTTTTCTCCATATTTCTCTTCCAGTGCTTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SRRHLYCVKTSTWSS*ICCFLHISLPVLSA Trigger: TGCAGAAAGCACTGGAAGAGAAATATGGAGAAAACAGCAAATCCAAGAGCTCCAAGTACTAGTTTTGACACAGTAGAGGTGTCTTCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS CCA 72 bp | TCGTGGGCGTGCTCCTCTGGTCCTGAGCCCCCAAGCTaGGACCGTCATCCGTCCCCTGGCATGGCTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SWACSSGPEPPS*DRHPSPGMAEP Trigger: GGGCTCAGCCATGCCAGGGGACGGATGACGGTCCCAGCTTGGGGGCTCAGGACCAGAGGAGCACGCCCACGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS TCA 72 bp | CTGCCCTTCTGGTTCGTGGGCGTGCTCCTCTGGTCCTaGGCCCCCAAGCTGGGACCGTCATCCGTCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPFWFVGVLLWS*APKLGPSSVPW Trigger: CCAGGGGACGGATGACGGTCCCAGCTTGGGGGCTCAGGACCAGAGGAGCACGCCCACGAACCAGAAGGGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS GCA 72 bp | GTCCTGACGTGCCCACGGCAGCTCTGTACGTCCCAGTaGACTGCCAGTCCACAGCAGTCTGGACGGGCTACA | + |
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Preference number: 6 (lower is better) Translates to: VLTCPRQLCTSQ*TASPQQSGRAT Trigger: TGTAGCCCGTCCAGACTGCTGTGGACTGGCAGTGCACTGGGACGTACAGAGCTGCCGTGGGCACGTCAGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405091.6 |
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| CDS CAA 72 bp | GCCGCTTTCCAGGGGTCCAAGTCCTGTTGGCCCTCCTaGTCATTCAGATGGGCCCTGCTCCGTGGCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AAFQGSKSCWPS*SFRWALLRGPA Trigger: AGCTGGGCCACGGAGCAGGGCCCATCTGAATGACAAGGAGGGCCAACAGGACTTGGACCCCTGGAAAGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402860.7 |
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| CDS CAA 90 bp | GGTGTCCAAGGAACTGTAGGCCGCTTTCCAGGGGTCCAAGTCCTGTaGGCCCTCCTTGTCATTCAGATGGGCCCTGCTCCGTGGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GVQGTVGRFPGVQVL*ALLVIQMGPAPWPS Trigger: GCTGGGCCACGGAGCAGGGCCCATCTGAATGACAAGGAGGGCCAACAGGACTTGGACCCCTGGAAAGCGGCCTACAGTTCCTTGGACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402860.7 |
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| CDS GCA 72 bp | GACGTGCCCACGGCAGCTCTGTACGTCCCAGTGCACTaGCAGTCCACAGCAGTCTGGACGGGCTACAATGGA | + |
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Preference number: 6 (lower is better) Translates to: DVPTAALYVPVH*QSTAVWTGYNG Trigger: TCCATTGTAGCCCGTCCAGACTGCTGTGGACTGGCAGTGCACTGGGACGTACAGAGCTGCCGTGGGCACGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405091.6 |
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| CDS CCA 72 bp | GGATCGAGAGCCCGCATTCTTCAGGGACCTGGACTGTaGGTCCATGCCCAGAGAATCCCTGCTGGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: GSRARILQGPGL*VHAQRIPAGSS Trigger: ACTGCTGCCAGCAGGGATTCTCTGGGCATGGACCCACAGTCCAGGTCCCTGAAGAATGCGGGCTCTCGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS CCA 72 bp | TCGAGGAGGATCGAGAGCCCGCATTCTTCAGGGACCTaGACTGTGGGTCCATGCCCAGAGAATCCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRRIESPHSSGT*TVGPCPENPCW Trigger: CCAGCAGGGATTCTCTGGGCATGGACCCACAGTCCAGGTCCCTGAAGAATGCGGGCTCTCGATCCTCCTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS CAA 72 bp | GGAACTGTAGGCCGCTTTCCAGGGGTCCAAGTCCTGTaGGCCCTCCTTGTCATTCAGATGGGCCCTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: GTVGRFPGVQVL*ALLVIQMGPAP Trigger: CGGAGCAGGGCCCATCTGAATGACAAGGAGGGCCAACAGGACTTGGACCCCTGGAAAGCGGCCTACAGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402860.7 |
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| CDS GCA 72 bp | ATGGGCCCTGCTCCGTGGCCCAGCTCCATAGCCTCTTaGTGTGGGACAGGCAATTCCAAGCTTAGTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: MGPAPWPSSIAS*CGTGNSKLSPL Trigger: GAGAGGACTAAGCTTGGAATTGCCTGTCCCACAGCAAGAGGCTATGGAGCTGGGCCACGGAGCAGGGCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402860.7 |
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| CDS CCA 72 bp | GGGTCCAAGTCCTGTTGGCCCTCCTTGTCATTCAGATaGGCCCTGGTGAAAGTGGTTGTACCTGCTCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: GSKSCWPSLSFR*ALVKVVVPAPW Trigger: CCACGGAGCAGGTACAACCACTTTCACCAGGGCCCATCTGAATGACAAGGAGGGCCAACAGGACTTGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381821.2 ENST00000405091.6 |
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| CDS CAA 72 bp | GGAACTGTAGGCCGCTTTCCAGGGGTCCAAGTCCTGTaGGCCCTCCTTGTCATTCAGATGGGCCCTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: GTVGRFPGVQVL*ALLVIQMGPGE Trigger: TTCACCAGGGCCCATCTGAATGACAAGGAGGGCCAACAGGACTTGGACCCCTGGAAAGCGGCCTACAGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381821.2 ENST00000405091.6 |
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| CDS CAA 90 bp | GGTGTCCAAGGAACTGTAGGCCGCTTTCCAGGGGTCCAAGTCCTGTaGGCCCTCCTTGTCATTCAGATGGGCCCTGGTGAAAGTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: GVQGTVGRFPGVQVL*ALLVIQMGPGESGC Trigger: ACAACCACTTTCACCAGGGCCCATCTGAATGACAAGGAGGGCCAACAGGACTTGGACCCCTGGAAAGCGGCCTACAGTTCCTTGGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381821.2 ENST00000405091.6 |
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| CDS CCA 72 bp | AGACGGAGGAGATTTCCACAGGATTCTGGGTCCTGCTaGGCCATGAGCTTGCCCTTTTCTGGCCCTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RRRRFPQDSGSC*AMSLPFSGPRR Trigger: TCTTCGAGGGCCAGAAAAGGGCAAGCTCATGGCCCAGCAGGACCCAGAATCCTGTGGAAATCTCCTCCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS CCA 72 bp | CTGTACGTCCCAGTGCACTGCCAGTCCACAGCAGTCTaGACGGGCTACAATGGAAGTGTGGACTCACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LYVPVHCQSTAV*TGYNGSVDSLP Trigger: TGGAAGTGAGTCCACACTTCCATTGTAGCCCGTCCAGACTGCTGTGGACTGGCAGTGCACTGGGACGTACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405091.6 |
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| CDS CAA 72 bp | GCCGCTTTCCAGGGGTCCAAGTCCTGTTGGCCCTCCTaGTCATTCAGATGGGCCCTGGTGAAAGTGGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: AAFQGSKSCWPS*SFRWALVKVVV Trigger: TACAACCACTTTCACCAGGGCCCATCTGAATGACAAGGAGGGCCAACAGGACTTGGACCCCTGGAAAGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381821.2 ENST00000405091.6 |
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| CDS CAA 90 bp | GAGACCAGCTGGTCCACCACATTGCTCCCAAACTTGTGGCGAATGTaGTTAGGAATGATGCTGCCCTTCTGGTTCGTGGGCGTGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ETSWSTTLLPNLWRM*LGMMLPFWFVGVLL Trigger: GAGGAGCACGCCCACGAACCAGAAGGGCAGCATCATTCCTAACAACATTCGCCACAAGTTTGGGAGCAATGTGGTGGACCAGCTGGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS CAA 90 bp | GCCTGCTCCTCGGAGACCAGCTGGTCCACCACATTGCTCCCAAACTaGTGGCGAATGTTGTTAGGAATGATGCTGCCCTTCTGGTTCGTG | + |
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Preference number: 6 (lower is better) Translates to: ACSSETSWSTTLLPN*WRMLLGMMLPFWFV Trigger: CACGAACCAGAAGGGCAGCATCATTCCTAACAACATTCGCCACAAGTTTGGGAGCAATGTGGTGGACCAGCTGGTCTCCGAGGAGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS TCA 72 bp | GGAGATTTCCACAGGATTCTGGGTCCTGCTGGGCCATaGGCTTGCCCTTTTCTGGCCCTCGAAGACTTCATC | + |
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Preference number: 6 (lower is better) Translates to: GDFHRILGPAGP*ACPFLALEDFI Trigger: GATGAAGTCTTCGAGGGCCAGAAAAGGGCAAGCTCATGGCCCAGCAGGACCCAGAATCCTGTGGAAATCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS GCA 72 bp | TTTTCTGGTGCCACCGCCCCAGATCATCCGTCTTCCTaGCATGCCAGTGTTCTAAGTCCCTCACTGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: FSGATAPDHPSS*HASVLSPSLIS Trigger: AGAAATCAGTGAGGGACTTAGAACACTGGCATGGCAGGAAGACGGATGATCTGGGGCGGTGGCACCAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS CCA 72 bp | GAGACCAGCTGGTCCACCACATTGCTCCCAAACTTGTaGCGAATGTTGTTAGGAATGATGCTGCCCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ETSWSTTLLPNL*RMLLGMMLPFW Trigger: CCAGAAGGGCAGCATCATTCCTAACAACATTCGCCACAAGTTTGGGAGCAATGTGGTGGACCAGCTGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS CAA 72 bp | TGGTCCACCACATTGCTCCCAAACTTGTGGCGAATGTaGTTAGGAATGATGCTGCCCTTCTGGTTCGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: WSTTLLPNLWRM*LGMMLPFWFVG Trigger: GCCCACGAACCAGAAGGGCAGCATCATTCCTAACAACATTCGCCACAAGTTTGGGAGCAATGTGGTGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS CAA 72 bp | TCGGAGACCAGCTGGTCCACCACATTGCTCCCAAACTaGTGGCGAATGTTGTTAGGAATGATGCTGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SETSWSTTLLPN*WRMLLGMMLPF Trigger: GAAGGGCAGCATCATTCCTAACAACATTCGCCACAAGTTTGGGAGCAATGTGGTGGACCAGCTGGTCTCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 |
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| CDS CCA 72 bp | AGTGCTTTCTGCAAGTTCAGGTTCATAGCATTTTTCTaGTGCCACCGCCCCAGATCATCCGTCTTCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SAFCKFRFIAFF*CHRPRSSVFLP Trigger: TGGCAGGAAGACGGATGATCTGGGGCGGTGGCACCAGAAAAATGCTATGAACCTGAACTTGCAGAAAGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS GCA 72 bp | TTGCTGTTTTCTCCATATTTCTCTTCCAGTGCTTTCTaGAAGTTCAGGTTCATAGCATTTTTCTGGTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLFSPYFSSSAF*KFRFIAFFWCH Trigger: GTGGCACCAGAAAAATGCTATGAACCTGAACTTGCAGAAAGCACTGGAAGAGAAATATGGAGAAAACAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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| CDS CCA 72 bp | CACCTCTACTGTGTCAAAACTAGTACTTGGAGCTCTTaGATTTGCTGTTTTCTCCATATTTCTCTTCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: HLYCVKTSTWSS*ICCFLHISLPV Trigger: CACTGGAAGAGAAATATGGAGAAAACAGCAAATCCAAGAGCTCCAAGTACTAGTTTTGACACAGTAGAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000381821.2 ENST00000402860.7 ENST00000405091.6 ENST00000442538.5 |
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