Pregenerated sensors for TEX28 (Homo sapiens)

Ensembl gene IDs: ENSG00000278057

Ensembl transcript IDs: ENST00000617213.1, ENST00000617225.4, ENST00000619903.4

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	ACTGAGAGAATAACAGGGTTCATTCGAGTCAGTCACGTCACAGGCTaGCAATGGGCTAACTCCTCCTCAACAATCACACGGGGCTTGCCT	+
Preference number: 5 (lower is better) Translates to: TERITGFIRVSHVTG*QWANSSSTITRGLP Trigger: AGGCAAGCCCCGTGTGATTGTTGAGGAGGAGTTAGCCCATTGCCAGCCTGTGACGTGACTGACTCGAATGAACCCTGTTATTCTCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619903.4
CDS TCA 90 bp	GGCTGCCTTCTCAATAGCATCAATGCAATCCAGAAGATAGTTGACTaGTATCTTCGATACACTGAGAGAATAATTGCGGAGGGAGCGGCC	+
Preference number: 5 (lower is better) Translates to: GCLLNSINAIQKIVD*YLRYTERIIAEGAA Trigger: GGCCGCTCCCTCCGCAATTATTCTCTCAGTGTATCGAAGATATCAGTCAACTATCTTCTGGATTGCATTGATGCTATTGAGAAGGCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617213.1
CDS TCA 90 bp	GGCTGCCTTCTCAATAGCATCAATGCAATCCAGAAGATAGTTGACTaGTATCTTCGATACACTGAGAGAATAACTCAGAGGTGGGGAGAA	+
Preference number: 5 (lower is better) Translates to: GCLLNSINAIQKIVD*YLRYTERITQRWGE Trigger: TTCTCCCCACCTCTGAGTTATTCTCTCAGTGTATCGAAGATATCAGTCAACTATCTTCTGGATTGCATTGATGCTATTGAGAAGGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617225.4
CDS TCA 90 bp	GGCTGCCTTCTCAATAGCATCAATGCAATCCAGAAGATAGTTGACTaGTATCTTCGATACACTGAGAGAATAACAGGGTTCATTCGAGTC	+
Preference number: 5 (lower is better) Translates to: GCLLNSINAIQKIVD*YLRYTERITGFIRV Trigger: GACTCGAATGAACCCTGTTATTCTCTCAGTGTATCGAAGATATCAGTCAACTATCTTCTGGATTGCATTGATGCTATTGAGAAGGCAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619903.4
CDS CCA 72 bp	GGGTTCATTCGAGTCAGTCACGTCACAGGCTGGCAATaGGCTAACTCCTCCTCAACAATCACACGGGGCTTG	+
Preference number: 6 (lower is better) Translates to: GFIRVSHVTGWQ*ANSSSTITRGL Trigger: CAAGCCCCGTGTGATTGTTGAGGAGGAGTTAGCCCATTGCCAGCCTGTGACGTGACTGACTCGAATGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619903.4
CDS CCA 72 bp	ATAACAGGGTTCATTCGAGTCAGTCACGTCACAGGCTaGCAATGGGCTAACTCCTCCTCAACAATCACACGG	+
Preference number: 6 (lower is better) Translates to: ITGFIRVSHVTG*QWANSSSTITR Trigger: CCGTGTGATTGTTGAGGAGGAGTTAGCCCATTGCCAGCCTGTGACGTGACTGACTCGAATGAACCCTGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619903.4
CDS TCA 72 bp	CTCAATAGCATCAATGCAATCCAGAAGATAGTTGACTaGTATCTTCGATACACTGAGAGAATAATTGCGGAG	+
Preference number: 6 (lower is better) Translates to: LNSINAIQKIVD*YLRYTERIIAE Trigger: CTCCGCAATTATTCTCTCAGTGTATCGAAGATATCAGTCAACTATCTTCTGGATTGCATTGATGCTATTGAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617213.1
CDS TCA 72 bp	CTCAATAGCATCAATGCAATCCAGAAGATAGTTGACTaGTATCTTCGATACACTGAGAGAATAACTCAGAGG	+
Preference number: 6 (lower is better) Translates to: LNSINAIQKIVD*YLRYTERITQR Trigger: CCTCTGAGTTATTCTCTCAGTGTATCGAAGATATCAGTCAACTATCTTCTGGATTGCATTGATGCTATTGAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617225.4

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