RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEX15 (Homo sapiens)

Ensembl gene IDs: ENSG00000133863

Ensembl transcript IDs: ENST00000256246.5, ENST00000518257.1, ENST00000638951.1, ENST00000643185.2

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGTGAGGGCTCTGTCTaGCTAGGATCTTACAGAAAA +
Preference number: 2 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCEGSV*LGSYRK
Trigger: TTTTCTGTAAGATCCTAGTCAGACAGAGCCCTCACA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
3UTR-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGCTTTCAGCTCAAATaGCACAATGCCATCAACAAT +
Preference number: 2 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCFQLK*HNAINN
Trigger: ATTGTTGATGGCATTGTGCCATTTGAGCTGAAAGCA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
3UTR-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGCTTTCAGCTCAAATaGCACAATGCCATCAACAAT +
Preference number: 2 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICFQLK*HNAINN
Trigger: ATTGTTGATGGCATTGTGCCATTTGAGCTGAAAGCA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
3UTR-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGTAGAAAAAGGCATTaGAAGTGCTTCATTGCCAAT +
Preference number: 2 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCRKRH*KCFIAN
Trigger: ATTGGCAATGAAGCACTTTCAATGCCTTTTTCTACA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
3UTR-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGTAGAAAAAGGCATTaGAAGTGCTTCATTGCCAAT +
Preference number: 2 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICRKRH*KCFIAN
Trigger: ATTGGCAATGAAGCACTTTCAATGCCTTTTTCTACA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
3UTR-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAACAGGAATAGCTGTTaGGCAAGAAAGGTAATACAT +
Preference number: 2 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKNRNSC*ARKVIH
Trigger: ATGTATTACCTTTCTTGCTCAACAGCTATTCCTGTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
3UTR-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCCTCCCCTTATAATTaGATGGAAATAATTCTGGTA +
Preference number: 2 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPSPYN*MEIILV
Trigger: TACCAGAATTATTTCCATGCAATTATAAGGGGAGGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
3UTR-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACCCTCCCCTTATAATTaGATGGAAATAATTCTGGTA +
Preference number: 2 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKPSPYN*MEIILV
Trigger: TACCAGAATTATTTCCATGCAATTATAAGGGGAGGG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
3UTR-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACACTATTGCTTAACTTaGATCATATTACCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHYCLT*IILPSP
Trigger: AGGGGAGGGTAATATGATCAAAGTTAAGCAATAGTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
3UTR-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCACTATTGCTTAACTTaGATCATATTACCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHYCLT*IILPSP
Trigger: AGGGGAGGGTAATATGATCAAAGTTAAGCAATAGTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCAGACCTTCGCCCACTaGCTTCCCTGGAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIQTFAH*LPWKPQ
Trigger: CTGAGGCTTCCAGGGAAGGCAGTGGGCGAAGGTCTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCCCACTGCCTTCCCTaGAAGCCTCAGGAACACAGC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKAHCLP*KPQEHS
Trigger: GCTGTGTTCCTGAGGCTTCCAGGGAAGGCAGTGGGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCCCTGGGCAGTACTTaGAACTGTGGTCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKALGST*NCGQQP
Trigger: GGGCTGTTGACCACAGTTGCAAGTACTGCCCAGGGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCCCTGGGCAGTACTTaGAACTGTGGTCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIALGST*NCGQQP
Trigger: GGGCTGTTGACCACAGTTGCAAGTACTGCCCAGGGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGGTCTATCCAGTTGTaGGGGCTCTGTCTGACTAGG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKRSIQL*GLCLTR
Trigger: CCTAGTCAGACAGAGCCCTCACAACTGGATAGACCT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGGCACAAAGCCATTTaGTTGTGGCTCCCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIWHKAI*LWLPRK
Trigger: TTTGCGGGGGAGCCACAAGCAAATGGCTTTGTGCCA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCTCTGCTCACAGTGTaGTACAGTACTGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIALLTV*YSTGCC
Trigger: GCAGCATCCAGTACTGTACCACACTGTGAGCAGAGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCTCTGCTCACAGTGTaGTACAGTACTGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKALLTV*YSTGCC
Trigger: GCAGCATCCAGTACTGTACCACACTGTGAGCAGAGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAACCAGGGACAACTTCTaGGGAGGAGGCAGAATTAGA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKTRDNF*GGGRIR
Trigger: TCTAATTCTGCCTCCTCCTCAGAAGTTGTCCCTGGT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTACCAGGGACAACTTCTaGGGAGGAGGCAGAATTAGA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMITRDNF*GGGRIR
Trigger: TCTAATTCTGCCTCCTCCTCAGAAGTTGTCCCTGGT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATACTCCACAGAGTGCTaGGGATGCTTTTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKYSTEC*GCFCDR
Trigger: CCTGTCACAAAAGCATCCTCAGCACTCTGTGGAGTA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTACTCCACAGAGTGCTaGGGATGCTTTTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIYSTEC*GCFCDR
Trigger: CCTGTCACAAAAGCATCCTCAGCACTCTGTGGAGTA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTACAGACCTTCCCAACTaGTACGAGACTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMITDLPN*YETSEP
Trigger: AGGCTCTGAAGTCTCGTATCAGTTGGGAAGGTCTGT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGGTGGGGTGACTTTTTaGGACACTGCTAGCCATACT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKGGVTF*DTASHT
Trigger: AGTATGGCTAGCAGTGTCTCAAAAAGTCACCCCACC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACGTCCCATGGTCTGGTaGAAATGTGCCATGTACACT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKRPMVW*KCAMYT
Trigger: AGTGTACATGGCACATTTTCACCAGACCATGGGACG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCGTCCCATGGTCTGGTaGAAATGTGCCATGTACACT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIRPMVW*KCAMYT
Trigger: AGTGTACATGGCACATTTTCACCAGACCATGGGACG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTACAGAAAATTGGCTTTaGGAGCACCGACGCATCAGG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMITENWL*EHRRIR
Trigger: CCTGATGCGTCGGTGCTCTCAAAGCCAATTTTCTGT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAACAGAAAATTGGCTTTaGGAGCACCGACGCATCAGG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKTENWL*EHRRIR
Trigger: CCTGATGCGTCGGTGCTCTCAAAGCCAATTTTCTGT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACACGGGTTTGCTAGTTaGGCTCATTTGCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHGFAS*AHLPQC
Trigger: ACACTGTGGCAAATGAGCTCAACTAGCAAACCCGTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCATGTGACTGGTGGTaGGGTGACTTTTTGAGACAC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPCDWW*GDFLRH
Trigger: GTGTCTCAAAAAGTCACCCCACCACCAGTCACATGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTCCCATGTGACTGGTaGTGGGGTGACTTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILPCDW*WGDFLR
Trigger: TCTCAAAAAGTCACCCCACCACCAGTCACATGGGAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACAGTACTTGCAACTGTaGTCAACAGCCCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKQYLQL*STAQKE
Trigger: CTCCTTCTGGGCTGTTGACCACAGTTGCAAGTACTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCAGTACTTGCAACTGTaGTCAACAGCCCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIQYLQL*STAQKE
Trigger: CTCCTTCTGGGCTGTTGACCACAGTTGCAAGTACTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGGCCATTTCGTAACATaGTTGATGGCCCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKGHFVT*LMALLT
Trigger: TGTCAGGAGGGCCATCAACCATGTTACGAAATGGCC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638951.1
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCAGAGCCCATGTTGTaGGCCCAAGATTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISEPML*AQDCES
Trigger: TGATTCACAATCTTGGGCTCACAACATGGGCTCTGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCAGAGCCCATGTTGTaGGCCCAAGATTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSEPML*AQDCES
Trigger: TGATTCACAATCTTGGGCTCACAACATGGGCTCTGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACACTCAGATGAGTCTTaGCTGGTTAGCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHSDES*LVSLLF
Trigger: AAAGAGGAGGCTAACCAGTCAAGACTCATCTGAGTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCCTTCTCCTCACTGTaGTTTTGGTTCTCAACCTCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKAFSSL*FWFSTS
Trigger: AGAGGTTGAGAACCAAAACCACAGTGAGGAGAAGGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCCTTCTCCTCACTGTaGTTTTGGTTCTCAACCTCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIAFSSL*FWFSTS
Trigger: AGAGGTTGAGAACCAAAACCACAGTGAGGAGAAGGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACAGATGAGTCTTGACTaGTTAGCCTCCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKQMSLD*LASSFS
Trigger: GGAGAAAGAGGAGGCTAACCAGTCAAGACTCATCTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCAGATGAGTCTTGACTaGTTAGCCTCCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIQMSLD*LASSFS
Trigger: GGAGAAAGAGGAGGCTAACCAGTCAAGACTCATCTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGCAAAAGCGTCCCATaGTCTGGTGAAAATGTGCCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCKSVP*SGENVP
Trigger: TGGCACATTTTCACCAGACCATGGGACGCTTTTGCA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGCAAAAGCGTCCCATaGTCTGGTGAAAATGTGCCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICKSVP*SGENVP
Trigger: TGGCACATTTTCACCAGACCATGGGACGCTTTTGCA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTAGAATGTGTGCCCTaGGCAGTACTTGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILECVP*AVLATV
Trigger: CACAGTTGCAAGTACTGCCCAGGGCACACATTCTAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGGGCTACATCACTCTaGGGAAGTGCTAAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKWATSL*GSAKKQ
Trigger: CTGCTTTTTAGCACTTCCCCAGAGTGATGTAGCCCA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGGGCTACATCACTCTaGGGAAGTGCTAAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIWATSL*GSAKKQ
Trigger: CTGCTTTTTAGCACTTCCCCAGAGTGATGTAGCCCA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGTAGTGACTGTGCTTaGGCCAGTATTGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSSDCA*ASIVVK
Trigger: CTTCACAACAATACTGGCTCAAGCACAGTCACTACT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTTTTCGCCTTTGTGTaGCCTATGCAAGTTGCATCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVFAFV*PMQVAS
Trigger: TGATGCAACTTGCATAGGTCACACAAAGGCGAAAAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTTTTCGCCTTTGTGTaGCCTATGCAAGTTGCATCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVFAFV*PMQVAS
Trigger: TGATGCAACTTGCATAGGTCACACAAAGGCGAAAAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTTCCTGGATACGAATaGACTTTAGGAGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFPGYE*TLGESP
Trigger: TGGGGACTCTCCTAAAGTTCATTCGTATCCAGGAAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTCCTGGATACGAATaGACTTTAGGAGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFPGYE*TLGESP
Trigger: TGGGGACTCTCCTAAAGTTCATTCGTATCCAGGAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTGTTTATGCACTCTaGTACTGGGGGCAACATCGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFVYAL*YWGQHR
Trigger: ACGATGTTGCCCCCAGTATCAGAGTGCATAAACAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTTCGCTTTTGGGATaGGATCCTGTAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFSLLG*DPVVLG
Trigger: TCCAAGGACTACAGGATCTCATCCCAAAAGCGAAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTTTCGCTTTTGGGATaGGATCCTGTAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFSLLG*DPVVLG
Trigger: TCCAAGGACTACAGGATCTCATCCCAAAAGCGAAAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTTGCTTTCCGACTTTaGTGCGCAAGTGTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFAFRL*CASVFW
Trigger: CCAAAAGACACTTGCGCATCAAAGTCGGAAAGCAAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTTCAGTGTCCTGGATaGAAGGATTCTTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFQCPG*KDSWCH
Trigger: ATGGCACCAAGAATCCTTTCATCCAGGACACTGAAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTCAGTGTCCTGGATaGAAGGATTCTTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFQCPG*KDSWCH
Trigger: ATGGCACCAAGAATCCTTTCATCCAGGACACTGAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGTGAGGGCTCTGTCTaGCTAGGATCTTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICEGSV*LGSYRK
Trigger: TTTTCTGTAAGATCCTAGTCAGACAGAGCCCTCACA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTAGGGCTAACCCTTaGGAAAGGTCTATCCAGTTG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFRANP*ERSIQL
Trigger: CAACTGGATAGACCTTTCTCAAGGGTTAGCCCTAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTTAGGGCTAACCCTTaGGAAAGGTCTATCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFRANP*ERSIQL
Trigger: CAACTGGATAGACCTTTCTCAAGGGTTAGCCCTAAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCCAGTTCCTCATTGTaGACCAGTTTTGTATCCCCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISSSSL*TSFVSP
Trigger: TGGGGATACAAAACTGGTTCACAATGAGGAACTGGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATAGAAGTACACTGCTaGACTGTAGGCTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKIEVHC*TVGLQF
Trigger: GAACTGCAAGCCTACAGTTCAGCAGTGTACTTCTAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATAGAAGTACACTGCTaGACTGTAGGCTTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIIEVHC*TVGLQF
Trigger: GAACTGCAAGCCTACAGTTCAGCAGTGTACTTCTAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGATAAGGGAACATCTTaGGCTGTCTTCTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIDKGTS*AVFFAQ
Trigger: CTGAGCAAAGAAGACAGCTCAAGATGTTCCCTTATC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTCCTTACATTGCCCTaGCATGGTAACTTTATTGGG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVLTLP*HGNFIG
Trigger: CCCAATAAAGTTACCATGGCAGGGCAATGTAAGGAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTCCTTACATTGCCCTaGCATGGTAACTTTATTGGG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVLTLP*HGNFIG
Trigger: CCCAATAAAGTTACCATGGCAGGGCAATGTAAGGAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTCGTGGAAGCCAAATaGTCTACACTTCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVVEAK*STLLPV
Trigger: TACTGGAAGAAGTGTAGAGCATTTGGCTTCCACGAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCTCCCTTCCTGTGGTaGTTTCCAAAACTTCCATCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSPFLW*FPKLPS
Trigger: AGATGGAAGTTTTGGAAAGCACCACAGGAAGGGAGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCTCCCTTCCTGTGGTaGTTTCCAAAACTTCCATCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISPFLW*FPKLPS
Trigger: AGATGGAAGTTTTGGAAAGCACCACAGGAAGGGAGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTGACCTATGCAAGTTaGATCACAATCGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVTYAS*ITIVAC
Trigger: ACAGGCAACGATTGTGATGCAACTTGCATAGGTCAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTGACCTATGCAAGTTaGATCACAATCGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVTYAS*ITIVAC
Trigger: ACAGGCAACGATTGTGATGCAACTTGCATAGGTCAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTGAGCTGTCTTCTTTaGTCAGTCAGTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLSCLL*SVSSSD
Trigger: GTCTGAGGAACTGACTGAGCAAAGAAGACAGCTCAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTGGGGTATGTCTTTTaGTTTCGGGAAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILGYVF*FRESFS
Trigger: ACTGAAGCTTTCCCGAAACCAAAAGACATACCCCAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTGGGGTATGTCTTTTaGTTTCGGGAAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLGYVF*FRESFS
Trigger: ACTGAAGCTTTCCCGAAACCAAAAGACATACCCCAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTGTACTTTGGGATGTaGAGGATACAGGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILYFGM*RIQATV
Trigger: CACAGTTGCCTGTATCCTCCACATCCCAAAGTACAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTGTACTTTGGGATGTaGAGGATACAGGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLYFGM*RIQATV
Trigger: CACAGTTGCCTGTATCCTCCACATCCCAAAGTACAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTGTTGAAATCCACGTaGTTTTCCAAGAAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLLKST*FSKKLS
Trigger: GCTGAGCTTCTTGGAAAACCACGTGGATTTCAACAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTGTTGAAATCCACGTaGTTTTCCAAGAAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILLKST*FSKKLS
Trigger: GCTGAGCTTCTTGGAAAACCACGTGGATTTCAACAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGTTCTGGATACAGATaGGTTCTGGAGAAGTCATGC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICSGYR*VLEKSC
Trigger: GCATGACTTCTCCAGAACCCATCTGTATCCAGAACA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGTTCTGGATACAGATaGGTTCTGGAGAAGTCATGC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCSGYR*VLEKSC
Trigger: GCATGACTTCTCCAGAACCCATCTGTATCCAGAACA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATCCCTTGGTATGTCTaGGTAATGGCATTGCCATTG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIIPWYV*VMALPL
Trigger: CAATGGCAATGCCATTACCCAGACATACCAAGGGAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAACCCAAGGAACTTCTaGAGGCACAAATCGATTAGG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKNPRNF*RHKSIR
Trigger: CCTAATCGATTTGTGCCTCCAGAAGTTCCTTGGGTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTGGCCACTCTTCAATaGCATCCAGCATTACACAGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLATLQ*HPALHS
Trigger: ACTGTGTAATGCTGGATGCCATTGAAGAGTGGCCAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTTACTCACTGGCCCTaGTTCTTGCCTTATATTATC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVTHWP*FLPYII
Trigger: GATAATATAAGGCAAGAATCAGGGCCAGTGAGTAAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTTACTCACTGGCCCTaGTTCTTGCCTTATATTATC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVTHWP*FLPYII
Trigger: GATAATATAAGGCAAGAATCAGGGCCAGTGAGTAAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGGATACAGGCAACTGTaGTTCAGGATGTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIGYRQL*FRMFLI
Trigger: AATCAAGAACATCCTGAATCACAGTTGCCTGTATCC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGGATACAGGCAACTGTaGTTCAGGATGTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKGYRQL*FRMFLI
Trigger: AATCAAGAACATCCTGAATCACAGTTGCCTGTATCC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAAAATCACTCACGTATaGCGCAGGTTTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKKITHV*RRFLQK
Trigger: CTTCTGAAGAAACCTGCGTCATACGTGAGTGATTTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCTATAAGGGCCGTATaGTTAGCTGAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIAIRAV*LAEQCF
Trigger: AAAACATTGCTCAGCTAATCATACGGCCCTTATAGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCTATAAGGGCCGTATaGTTAGCTGAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKAIRAV*LAEQCF
Trigger: AAAACATTGCTCAGCTAATCATACGGCCCTTATAGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACACATTTATTCACTCTaGGTAGCCTTTCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHIYSL*VAFLRP
Trigger: AGGACGAAGAAAGGCTACTCAGAGTGAATAAATGTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCACATTTATTCACTCTaGGTAGCCTTTCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHIYSL*VAFLRP
Trigger: AGGACGAAGAAAGGCTACTCAGAGTGAATAAATGTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCTTCGTTTATTGGATaGTCTGACTTTCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKASFIG*SDFLEA
Trigger: TGCTTCCAGAAAGTCAGATCATCCAATAAACGAAGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCTTCGTTTATTGGATaGTCTGACTTTCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIASFIG*SDFLEA
Trigger: TGCTTCCAGAAAGTCAGATCATCCAATAAACGAAGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCAGCTCAGGAAGAAGTaGCAAATCAAACCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIQLRKK*QIKPKH
Trigger: ATGCTTTGGTTTGATTTGTCACTTCTTCCTGAGCTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACAGCTCAGGAAGAAGTaGCAAATCAAACCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKQLRKK*QIKPKH
Trigger: ATGCTTTGGTTTGATTTGTCACTTCTTCCTGAGCTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCTTGCTGTTGTTCCTaGGAGTCTTCACATTTGTCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSCCCS*ESSHLS
Trigger: AGACAAATGTGAAGACTCTCAGGAACAACAGCAAGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCTTGCTGTTGTTCCTaGGAGTCTTCACATTTGTCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISCCCS*ESSHLS
Trigger: AGACAAATGTGAAGACTCTCAGGAACAACAGCAAGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTTCCTGTTGTCCACTaGAGTGATCAGATGAAACAG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFPVVH*SDQMKQ
Trigger: CTGTTTCATCTGATCACTTCAGTGGACAACAGGAAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTCCTGTTGTCCACTaGAGTGATCAGATGAAACAG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFPVVH*SDQMKQ
Trigger: CTGTTTCATCTGATCACTTCAGTGGACAACAGGAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACCTTTGTGTGACCTATaGAAGTTGCATCACAATCGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKPLCDL*KLHHNR
Trigger: ACGATTGTGATGCAACTTGCATAGGTCACACAAAGG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCTTTGTGTGACCTATaGAAGTTGCATCACAATCGT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPLCDL*KLHHNR
Trigger: ACGATTGTGATGCAACTTGCATAGGTCACACAAAGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTTCTCTACAGCTCTaGTCACAGTGTGGTACAGTA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFSLQL*SQCGTV
Trigger: TACTGTACCACACTGTGAGCAGAGCTGTAGAGAAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCTGTAGTCCTTGGATaGTTGAATGTTGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPVVLG*LNVAFS
Trigger: AGAAAAGGCAACATTCAAGCATCCAAGGACTACAGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACCTGTAGTCCTTGGATaGTTGAATGTTGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKPVVLG*LNVAFS
Trigger: AGAAAAGGCAACATTCAAGCATCCAAGGACTACAGG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGGTTATATGCCCAGATaGTCCAAAAGTATGCACAGT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIGYMPR*SKSMHS
Trigger: ACTGTGCATACTTTTGGAGCATCTGGGCATATAACC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCATTGCCATTGCTGTTaGTGTACTGATAAACACACC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHCHCC*CTDKHT
Trigger: GGTGTGTTTATCAGTACAGCAACAGCAATGGCAATG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACATTGCCATTGCTGTTaGTGTACTGATAAACACACC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHCHCC*CTDKHT
Trigger: GGTGTGTTTATCAGTACAGCAACAGCAATGGCAATG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTGTATCCCCAAACTaGCATAACGACTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFVSPN*HNDCRS
Trigger: TGATCTGCAGTCGTTATGGCAGTTTGGGGATACAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTTCTTCAAGTTCCCTaGAATGTCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVLQVP*NVFHFH
Trigger: GTGAAAGTGGAAGACATTGCAGGGAACTTGAAGAAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTTCTTCAAGTTCCCTaGAATGTCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVLQVP*NVFHFH
Trigger: GTGAAAGTGGAAGACATTGCAGGGAACTTGAAGAAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCATATGGAAGACATTaGCTAGGTTTATCTACAGGC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIAYGRH*LGLSTG
Trigger: GCCTGTAGATAAACCTAGGCAATGTCTTCCATATGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTTGGGAAATGTCGTaGAAGCCAAATGCTCTACAC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFWEMS*KPNALH
Trigger: GTGTAGAGCATTTGGCTTCCACGACATTTCCCAAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTTTGGGAAATGTCGTaGAAGCCAAATGCTCTACAC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFWEMS*KPNALH
Trigger: GTGTAGAGCATTTGGCTTCCACGACATTTCCCAAAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAAGAACTTGCAGTTTTaGGAAATGTCGTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKKNLQF*EMSWKP
Trigger: TGGCTTCCACGACATTTCCCAAAACTGCAAGTTCTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAAGAACTTGCAGTTTTaGGAAATGTCGTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIKNLQF*EMSWKP
Trigger: TGGCTTCCACGACATTTCCCAAAACTGCAAGTTCTT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCATTCCCATCTGTATaGAGGCAATTACCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISFPSV*RQLPEE
Trigger: CTCTTCAGGTAATTGCCTCCATACAGATGGGAATGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTACAGGTTTCAGAGTaGGCAGGTAAAATAGGCGTA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILQVSE*AGKIGV
Trigger: TACGCCTATTTTACCTGCCCACTCTGAAACCTGTAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTACAGGTTTCAGAGTaGGCAGGTAAAATAGGCGTA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLQVSE*AGKIGV
Trigger: TACGCCTATTTTACCTGCCCACTCTGAAACCTGTAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATAGCCTCATGGCTGTaGTTTATCACCACGTCTAAA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKIASWL*FITTSK
Trigger: TTTAGACGTGGTGATAAACCACAGCCATGAGGCTAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATAGCCTCATGGCTGTaGTTTATCACCACGTCTAAA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIIASWL*FITTSK
Trigger: TTTAGACGTGGTGATAAACCACAGCCATGAGGCTAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAAAATGATAGCCTCATaGCTGTGGTTTATCACCACG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKKMIAS*LWFITT
Trigger: CGTGGTGATAAACCACAGCCATGAGGCTATCATTTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGATCCTGTAGTCCTTaGATGCTTGAATGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKRSCSP*MLECCL
Trigger: AAGGCAACATTCAAGCATCCAAGGACTACAGGATCT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAGATCCTGTAGTCCTTaGATGCTTGAATGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIRSCSP*MLECCL
Trigger: AAGGCAACATTCAAGCATCCAAGGACTACAGGATCT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCATTCCAATGCTAGATaGTCTAGTTCATCCTTATCC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHSNAR*SSSSLS
Trigger: GGATAAGGATGAACTAGATCATCTAGCATTGGAATG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATGGCTAAACTTGTATaGATGTTACCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKMAKLV*MLPSYS
Trigger: GGAGTATGAGGGTAACATTCATACAAGTTTAGCCAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATGGCTAAACTTGTATaGATGTTACCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIMAKLV*MLPSYS
Trigger: GGAGTATGAGGGTAACATTCATACAAGTTTAGCCAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAGTTATGCTGCAATTTaGACTGTCATGAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISYAAI*TVMSCF
Trigger: GAAACAGCTCATGACAGTTCAAATTGCAGCATAACT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGTTATGCTGCAATTTaGACTGTCATGAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSYAAI*TVMSCF
Trigger: GAAACAGCTCATGACAGTTCAAATTGCAGCATAACT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTTCAGAGCCTTATATaGGGTCACAAATTCTTCACA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLQSLI*GHKFFT
Trigger: TGTGAAGAATTTGTGACCTCATATAAGGCTCTGAAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTTCAGAGCCTTATATaGGGTCACAAATTCTTCACA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILQSLI*GHKFFT
Trigger: TGTGAAGAATTTGTGACCTCATATAAGGCTCTGAAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTCAGTATTAACAGTTaGTCCTTCAGTCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLSINS*SFSHAS
Trigger: AGAAGCATGACTGAAGGATCAACTGTTAATACTGAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTCAGTATTAACAGTTaGTCCTTCAGTCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILSINS*SFSHAS
Trigger: AGAAGCATGACTGAAGGATCAACTGTTAATACTGAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTTCTTCAAAGGGACTaGCTCAGTGGTAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVLQRD*LSGSIF
Trigger: AAAAATACTACCACTGAGTCAGTCCCTTTGAAGAAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTTCTTCAAAGGGACTaGCTCAGTGGTAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVLQRD*LSGSIF
Trigger: AAAAATACTACCACTGAGTCAGTCCCTTTGAAGAAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCCCTCTGCAAAATTTaGGATAGATTAGCTATAAGG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKALCKI*DRLAIR
Trigger: CCTTATAGCTAATCTATCTCAAATTTTGCAGAGGGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCCCTCTGCAAAATTTaGGATAGATTAGCTATAAGG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIALCKI*DRLAIR
Trigger: CCTTATAGCTAATCTATCTCAAATTTTGCAGAGGGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAAATTAGACTGCTGTTaGAATCCACGTGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKKLDCC*NPRGFP
Trigger: TGGAAAACCACGTGGATTTCAACAGCAGTCTAATTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGTTGTCCACTGAAGTaGTCAGATGAAACAGTTAAG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICCPLK*SDETVK
Trigger: CTTAACTGTTTCATCTGATCACTTCAGTGGACAACA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGAGTACTCTGCTCCTTaGTTCACATTAAGGGTTATA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKEYSAP*FTLRVI
Trigger: TATAACCCTTAATGTGAATCAAGGAGCAGAGTACTC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGAGTACTCTGCTCCTTaGTTCACATTAAGGGTTATA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIEYSAP*FTLRVI
Trigger: TATAACCCTTAATGTGAATCAAGGAGCAGAGTACTC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGGCTGTACTTCATATaGTGTTATCCCTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKWLYFI*CYPLVC
Trigger: ACATACCAAGGGATAACATCATATGAAGTACAGCCA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGGCTGTACTTCATATaGTGTTATCCCTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIWLYFI*CYPLVC
Trigger: ACATACCAAGGGATAACATCATATGAAGTACAGCCA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATTGGTGTAACAAGGTaGCAAGTAAACTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKIGVTR*QVNFLS
Trigger: GCTGAGAAAGTTTACTTGTCACCTTGTTACACCAAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTTAGGAAATCCTGTTaGGAGGAATCTCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLRKSC*EESQRC
Trigger: ACATCTTTGAGATTCCTCTCAACAGGATTTCCTAAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGGTACAGTACTGGATaGTGCAAAAGAATCTACAGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKWYSTG*CKRIYS
Trigger: ACTGTAGATTCTTTTGCAGCATCCAGTACTGTACCA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAAGCAATCGGAACAATaGTCCATTATGGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIKQSEQ*SIMASH
Trigger: ATGTGAAGCCATAATGGAGCATTGTTCCGATTGCTT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACAGTTAAGTCTATTTTaGTTTCCGACTTTGATGCGC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKQLSLF*FPTLMR
Trigger: GCGCATCAAAGTCGGAAAGCAAAATAGACTTAACTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGAGACAGCTCAAGACTaGAGTTACATACTATATCCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIETAQD*SYILYP
Trigger: AGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGAGACAGCTCAAGACTaGAGTTACATACTATATCCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKETAQD*SYILYP
Trigger: AGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTAGTTGAGCTCATTTaGCACAGTGTATCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLVELI*HSVSCL
Trigger: TAAACAGGATACACTGTGGCAAATGAGCTCAACTAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTAGTTGAGCTCATTTaGCACAGTGTATCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILVELI*HSVSCL
Trigger: TAAACAGGATACACTGTGGCAAATGAGCTCAACTAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAACTGCCATAACGACTaGAGATCACAGTTTACATCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKNCHND*RSQFTS
Trigger: TGATGTAAACTGTGATCTGCAGTCGTTATGGCAGTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAACAGGTTTCTTGAAATaGACAAAGGTGACAGTAGCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKTGFLK*TKVTVA
Trigger: TGCTACTGTCACCTTTGTGCATTTCAAGAAACCTGT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTACAGGTTTCTTGAAATaGACAAAGGTGACAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMITGFLK*TKVTVA
Trigger: TGCTACTGTCACCTTTGTGCATTTCAAGAAACCTGT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATTTCTGCTAAACTGTaGTCTGTCTGTCCACTGTAT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIISAKL*SVCPLY
Trigger: ATACAGTGGACAGACAGAGCACAGTTTAGCAGAAAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATTTCTGCTAAACTGTaGTCTGTCTGTCCACTGTAT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKISAKL*SVCPLY
Trigger: ATACAGTGGACAGACAGAGCACAGTTTAGCAGAAAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAACATTTCTTTGGCCTaGGGTATGTCTTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKNISLA*GMSFGF
Trigger: GAAACCAAAAGACATACCCCAGGCCAAAGAAATGTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTATTTCCGGTTTTGTaGCTTCAGTTACATGTGTGC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLFPVL*LQLHVC
Trigger: GCACACATGTAACTGAAGCCACAAAACCGGAAATAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTATTTCCGGTTTTGTaGCTTCAGTTACATGTGTGC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILFPVL*LQLHVC
Trigger: GCACACATGTAACTGAAGCCACAAAACCGGAAATAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGTGTGGTACAGTACTaGATGCTGCAAAAGAATCTA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSVVQY*MLQKNL
Trigger: TAGATTCTTTTGCAGCATCCAGTACTGTACCACACT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAGTGTGGTACAGTACTaGATGCTGCAAAAGAATCTA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISVVQY*MLQKNL
Trigger: TAGATTCTTTTGCAGCATCCAGTACTGTACCACACT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATGATAATCCACAGATaGTCCTGTTTTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIMIIHR*SCFPGY
Trigger: GTATCCAGGAAAACAGGACCATCTGTGGATTATCAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTAGGAATTTTGTTCTaGATACAGATGGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVGILF*IQMGSG
Trigger: TCCAGAACCCATCTGTATCCAGAACAAAATTCCTAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTAGGAATTTTGTTCTaGATACAGATGGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVGILF*IQMGSG
Trigger: TCCAGAACCCATCTGTATCCAGAACAAAATTCCTAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTTCATTCCAATATGTaGCAGCATTCTGCATTAGGA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVHSNM*QHSALG
Trigger: TCCTAATGCAGAATGCTGCCACATATTGGAATGAAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTTCATTCCAATATGTaGCAGCATTCTGCATTAGGA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVHSNM*QHSALG
Trigger: TCCTAATGCAGAATGCTGCCACATATTGGAATGAAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTATGATGTTATCCCTTaGTATGTCTGGGTAATGGCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIYDVIP*YVWVMA
Trigger: TGCCATTACCCAGACATACCAAGGGATAACATCATA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATATGATGTTATCCCTTaGTATGTCTGGGTAATGGCA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKYDVIP*YVWVMA
Trigger: TGCCATTACCCAGACATACCAAGGGATAACATCATA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAAAATACCCATTCACTaGCACAAAGCCATTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIKIPIH*HKAICL
Trigger: CAAGCAAATGGCTTTGTGCCAGTGAATGGGTATTTT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAAAATACCCATTCACTaGCACAAAGCCATTTGCTTG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKKIPIH*HKAICL
Trigger: CAAGCAAATGGCTTTGTGCCAGTGAATGGGTATTTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCATTTCCATTTTGTTaGCCACTCTTCAATGGCATC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISFPFC*PLFNGI
Trigger: GATGCCATTGAAGAGTGGCCAACAAAATGGAAATGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTGAGCCCAAGATTGTaGATCATTAACAGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVSPRL*IINRSF
Trigger: AAAACTTCTGTTAATGATTCACAATCTTGGGCTCAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTGAGCCCAAGATTGTaGATCATTAACAGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVSPRL*IINRSF
Trigger: AAAACTTCTGTTAATGATTCACAATCTTGGGCTCAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAACTGGTATATCTGGTaGTCGTCATTATTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMINWYIW*SSLFRL
Trigger: AAGCCTAAATAATGACGATCACCAGATATACCAGTT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAACTGGTATATCTGGTaGTCGTCATTATTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKNWYIW*SSLFRL
Trigger: AAGCCTAAATAATGACGATCACCAGATATACCAGTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTATGTGGTATGTTCTaGTCCCTGGAAGATATATGT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILCGMF*SLEDIC
Trigger: ACATATATCTTCCAGGGATCAGAACATACCACATAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGATTCAGGATGTTCTTaGTTACAAAATTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIDSGCS*LQNSPM
Trigger: CATGGGAGAATTTTGTAATCAAGAACATCCTGAATC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGATTCAGGATGTTCTTaGTTACAAAATTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKDSGCS*LQNSPM
Trigger: CATGGGAGAATTTTGTAATCAAGAACATCCTGAATC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTTCCAGAAAAGGGCTaGTGTTCTTCTGATAAACTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFPEKG*CSSDKL
Trigger: AAGTTTATCAGAAGAACATCAGCCCTTTTCTGGAAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTCCAGAAAAGGGCTaGTGTTCTTCTGATAAACTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFPEKG*CSSDKL
Trigger: AAGTTTATCAGAAGAACATCAGCCCTTTTCTGGAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATCCAAGTAAGATTTTaGAGATTCTCCCTCACTATC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIIQVRF*RFSLTI
Trigger: GATAGTGAGGGAGAATCTTCAAAATCTTACTTGGAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACACAATACATGTTTCTaGAGAGGAGCCTTTTACATT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHNTCF*RGAFYI
Trigger: AATGTAAAAGGCTCCTCTTCAGAAACATGTATTGTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGGTAAAATAGGCGTATaGTTAACTCCTAGAATTCCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKGKIGV*LTPRIP
Trigger: AGGAATTCTAGGAGTTAATCATACGCCTATTTTACC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGGTAAAATAGGCGTATaGTTAACTCCTAGAATTCCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIGKIGV*LTPRIP
Trigger: AGGAATTCTAGGAGTTAATCATACGCCTATTTTACC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGGCCGTATGATTAGCTaGGCAATGTTTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIGRMIS*AMFFFK
Trigger: TTTAAAGAAAAACATTGCTCAGCTAATCATACGGCC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGGCCGTATGATTAGCTaGGCAATGTTTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKGRMIS*AMFFFK
Trigger: TTTAAAGAAAAACATTGCTCAGCTAATCATACGGCC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATACCAACAGTTCTCTTaGAATCAGGATTTGTTCAAC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKYQQFS*NQDLFN
Trigger: GTTGAACAAATCCTGATTTCAAGAGAACTGTTGGTA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTACCAACAGTTCTCTTaGAATCAGGATTTGTTCAAC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIYQQFS*NQDLFN
Trigger: GTTGAACAAATCCTGATTTCAAGAGAACTGTTGGTA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTTTCCATCATCATTTaGAGTTCTACCAAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVSIII*SSTKVS
Trigger: TGACACTTTGGTAGAACTTCAAATGATGATGGAAAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCTGCAAATTCAGCCTaGTCCAATATCTCACTAATA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISANSA*SNISLI
Trigger: TATTAGTGAGATATTGGATCAGGCTGAATTTGCAGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCTGCAAATTCAGCCTaGTCCAATATCTCACTAATA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSANSA*SNISLI
Trigger: TATTAGTGAGATATTGGATCAGGCTGAATTTGCAGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAACAGGAATAGCTGTTaGGCAAGAAAGGTAATACAT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMINRNSC*ARKVIH
Trigger: ATGTATTACCTTTCTTGCTCAACAGCTATTCCTGTT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAGAAGGTGCATTTCTTaGCATATGGCAATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIRRCIS*HMAIKV
Trigger: AACTTTGATTGCCATATGTCAAGAAATGCACCTTCT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGAAGGTGCATTTCTTaGCATATGGCAATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKRRCIS*HMAIKV
Trigger: AACTTTGATTGCCATATGTCAAGAAATGCACCTTCT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR TCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCATGTGCAAGTACTTaGGAAGTGTCTCTAATTTCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSCAST*EVSLIS
Trigger: AGAAATTAGAGACACTTCTCAAGTACTTGCACATGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTCACATGGATAATCTaGATTTTCACCAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFTWII*IFTKRL
Trigger: CAGCCTTTTGGTGAAAATGCAGATTATCCATGTGAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTCACATGGATAATCTaGATTTTCACCAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFTWII*IFTKRL
Trigger: CAGCCTTTTGGTGAAAATGCAGATTATCCATGTGAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCTTCCTGTAGAATCTaGAAAGATGATGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISSCRI*KDDASS
Trigger: AGATGAAGCATCATCTTTGCAGATTCTACAGGAAGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCTTCCTGTAGAATCTaGAAAGATGATGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSSCRI*KDDASS
Trigger: AGATGAAGCATCATCTTTGCAGATTCTACAGGAAGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTAACTCTGTCACAGTaGTTCCATAATTTATGGATG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLTLSQ*FHNLWM
Trigger: CATCCATAAATTATGGAAGCACTGTGACAGAGTTAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTAACTCTGTCACAGTaGTTCCATAATTTATGGATG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILTLSQ*FHNLWM
Trigger: CATCCATAAATTATGGAAGCACTGTGACAGAGTTAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGATGCTCCAAAAGTATaGACAGTATTGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIDAPKV*TVLGFN
Trigger: ATTGAATCCCAATACTGTGCATACTTTTGGAGCATC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGATGCTCCAAAAGTATaGACAGTATTGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKDAPKV*TVLGFN
Trigger: ATTGAATCCCAATACTGTGCATACTTTTGGAGCATC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAACATTAAGGGTTATATaGCCAGATGCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKTLRVI*PDAPKV
Trigger: TACTTTTGGAGCATCTGGGCATATAACCCTTAATGT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTACATTAAGGGTTATATaGCCAGATGCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMITLRVI*PDAPKV
Trigger: TACTTTTGGAGCATCTGGGCATATAACCCTTAATGT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGAAAGAGAGTACTCTaGTCCTTGATTCACATTAAG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKRKRVL*SLIHIK
Trigger: CTTAATGTGAATCAAGGAGCAGAGTACTCTCTTTCT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATATGTTGGGTTACATaGAGACTGTGGAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKICWVT*RLWKFI
Trigger: AATGAACTTCCACAGTCTGCATGTAACCCAACATAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATATGTTGGGTTACATaGAGACTGTGGAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIICWVT*RLWKFI
Trigger: AATGAACTTCCACAGTCTGCATGTAACCCAACATAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTTTTCAAAGGCCTGTaGCAGATAACACAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLFKGL*QITQKV
Trigger: AACTTTTTGTGTTATCTGGCACAGGCCTTTGAAAAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTTTTCAAAGGCCTGTaGCAGATAACACAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILFKGL*QITQKV
Trigger: AACTTTTTGTGTTATCTGGCACAGGCCTTTGAAAAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTGACACCTATCAACTaGTTAGTTCCAACATTAGAT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILTPIN*LVPTLD
Trigger: ATCTAATGTTGGAACTAAGCAGTTGATAGGTGTCAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638951.1
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGTCGGGCTGAATCCTaGCCTAAATATATTAGTAAT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCRAES*PKYISN
Trigger: ATTACTAATATATTTAGGCCAGGATTCAGCCCGACA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGTCGGGCTGAATCCTaGCCTAAATATATTAGTAAT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICRAES*PKYISN
Trigger: ATTACTAATATATTTAGGCCAGGATTCAGCCCGACA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTTACATGCAGACTGTaGAAGTTCATTCCAATATGT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVTCRL*KFIPIC
Trigger: ACATATTGGAATGAACTTCCACAGTCTGCATGTAAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTTACATGCAGACTGTaGAAGTTCATTCCAATATGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVTCRL*KFIPIC
Trigger: ACATATTGGAATGAACTTCCACAGTCTGCATGTAAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAGAAGAATTATATGTTaGGTTACATGCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIRRIIC*VTCRLW
Trigger: CCACAGTCTGCATGTAACCCAACATATAATTCTTCT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTACATCAAGCCTGCACTaGTTAAGAGTATCATGTATA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMITSSLH*LRVSCI
Trigger: TATACATGATACTCTTAACCAGTGCAGGCTTGATGT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGAACTCTTCTCAAATTaGAAAACCTCATTTAAGCCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIELFSN*KTSFKP
Trigger: AGGCTTAAATGAGGTTTTGCAATTTGAGAAGAGTTC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGAACTCTTCTCAAATTaGAAAACCTCATTTAAGCCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKELFSN*KTSFKP
Trigger: AGGCTTAAATGAGGTTTTGCAATTTGAGAAGAGTTC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCACTTTCCAATTCAATaGTCTGAAGAACTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHFPIQ*SEELSS
Trigger: AGAACTTAGTTCTTCAGAGCATTGAATTGGAAAGTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAATGTCAAGTCAGACTaGGAGTCTTTACTAACTTTA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKNVKSD*ESLLTL
Trigger: TAAAGTTAGTAAAGACTCGCAGTCTGACTTGACATT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCAACTGAACATTCTTaGTTTCTTTCAAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSTEHS*FLSKAS
Trigger: GGAAGCTTTTGAAAGAAAGCAAGAATGTTCAGTTGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTATGTGGCAGCATTCTaGATTAGGACTTTTGAATTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIYVAAF*IRTFEF
Trigger: AAATTCAAAAGTCCTAATGCAGAATGCTGCCACATA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR GCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATATGTGGCAGCATTCTaGATTAGGACTTTTGAATTT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKYVAAF*IRTFEF
Trigger: AAATTCAAAAGTCCTAATGCAGAATGCTGCCACATA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTTTTAATTCGTCCTTaGGATAATGAAGAGAAACAC +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVLIRP*DNEEKH
Trigger: GTGTTTCTCTTCATTATCCCAAGGACGAATTAAAAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTTTTAATTCGTCCTTaGGATAATGAAGAGAAACAC +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVLIRP*DNEEKH
Trigger: GTGTTTCTCTTCATTATCCCAAGGACGAATTAAAAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCAGAGAACTATCACTaGAAGATAATTCCACTATAT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKAENYH*KIIPLY
Trigger: ATATAGTGGAATTATCTTCCAGTGATAGTTCTCTGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCAGAGAACTATCACTaGAAGATAATTCCACTATAT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIAENYH*KIIPLY
Trigger: ATATAGTGGAATTATCTTCCAGTGATAGTTCTCTGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATGACTTTCCTAATGTaGGCCATTTTTCCTAAATCT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIMTFLM*AIFPKS
Trigger: AGATTTAGGAAAAATGGCCCACATTAGGAAAGTCAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATGACTTTCCTAATGTaGGCCATTTTTCCTAAATCT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKMTFLM*AIFPKS
Trigger: AGATTTAGGAAAAATGGCCCACATTAGGAAAGTCAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTGTTATACAGCATTTaGCATAGGAAAAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILLYSI*HRKKEM
Trigger: CATTTCCTTTTTCCTATGCCAAATGCTGTATAACAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTGTTATACAGCATTTaGCATAGGAAAAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLLYSI*HRKKEM
Trigger: CATTTCCTTTTTCCTATGCCAAATGCTGTATAACAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAAGTATGCACAGTATTaGGATTCAATGTATCCTTCA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIKYAQY*DSMYPS
Trigger: TGAAGGATACATTGAATCCCAATACTGTGCATACTT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTATACTCTCTACTATTaGTGTAACAAGGTGACAAGT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIYTLYY*CNKVTS
Trigger: ACTTGTCACCTTGTTACACCAATAGTAGAGAGTATA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATATACTCTCTACTATTaGTGTAACAAGGTGACAAGT +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKYTLYY*CNKVTS
Trigger: ACTTGTCACCTTGTTACACCAATAGTAGAGAGTATA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCATTTCCATTTTGTTaGCCATTTCGTAACATGGTT +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISFPFC*PFRNMV
Trigger: AACCATGTTACGAAATGGCCAACAAAATGGAAATGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638951.1
CDS-3UTR CCA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCATTTCTTGACATATaGCAATCAAAGTTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKAFLDI*QSKLGE
Trigger: TTCTCCTAACTTTGATTGCCATATGTCAAGAAATGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CCA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCATTTCTTGACATATaGCAATCAAAGTTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIAFLDI*QSKLGE
Trigger: TTCTCCTAACTTTGATTGCCATATGTCAAGAAATGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGCCCTGGGCAGTACTaGCAACTGTGGTCAACAGCC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICPGQY*QLWSTA
Trigger: GGCTGTTGACCACAGTTGCAAGTACTGCCCAGGGCA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGCCCTGGGCAGTACTaGCAACTGTGGTCAACAGCC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCPGQY*QLWSTA
Trigger: GGCTGTTGACCACAGTTGCAAGTACTGCCCAGGGCA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTGGCACAAAGCCATTaGCTTGTGGCTCCCCCGCAA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLAQSH*LVAPPQ
Trigger: TTGCGGGGGAGCCACAAGCAAATGGCTTTGTGCCAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTGGCACAAAGCCATTaGCTTGTGGCTCCCCCGCAA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILAQSH*LVAPPQ
Trigger: TTGCGGGGGAGCCACAAGCAAATGGCTTTGTGCCAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp TGCAACTGTGGTCAACAGCCCAGAAGGAGATGGCTGTACTTCATATaGTGTTATCCCTTGGTATGTCTGGGTAATGGCATTGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: CNCGQQPRRRWLYFI*CYPLVCLGNGIAIA
Trigger: AGCAATGGCAATGCCATTACCCAGACATACCAAGGGATAACATCATATGAAGTACAGCCATCTCCTTCTGGGCTGTTGACCACAGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATTACCGGACTCCTGTaGGGCTCTCTGAGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKITGLL*GSLSLL
Trigger: GAGAAGGCTCAGAGAGCCCAACAGGAGTCCGGTAAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS GCA 90 bp ATATTGAGAGTACAGAAGATTAGAATGTGTGCCCTGGGCAGTACTTaGAACTGTGGTCAACAGCCCAGAAGGAGATGGCTGTACTTCATA +
Preference number: 5 (lower is better)
Translates to: ILRVQKIRMCALGST*NCGQQPRRRWLYFI
Trigger: TATGAAGTACAGCCATCTCCTTCTGGGCTGTTGACCACAGTTGCAAGTACTGCCCAGGGCACACATTCTAATCTTCTGTACTCTCAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACCTGGGGTATGTCTTTaGGTTTCGGGAAAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKPGVCL*VSGKLQ
Trigger: CTGAAGCTTTCCCGAAACCAAAAGACATACCCCAGG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCTGGGGTATGTCTTTaGGTTTCGGGAAAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPGVCL*VSGKLQ
Trigger: CTGAAGCTTTCCCGAAACCAAAAGACATACCCCAGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCAAGCTTCGCAATGTaGGTTCACCTTCTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKASFAM*VHLLSA
Trigger: GGCACTTAGAAGGTGAACCAACATTGCGAAGCTTGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTCTGGGTAATGGCATaGCCATTGCTGTTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVWVMA*PLLLLY
Trigger: GTACAGCAACAGCAATGGCAATGCCATTACCCAGAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTCTGGGTAATGGCATaGCCATTGCTGTTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVWVMA*PLLLLY
Trigger: GTACAGCAACAGCAATGGCAATGCCATTACCCAGAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACACAAAGCCATTTGCTaGTGGCTCCCCCGCAAAATA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHKAIC*WLPRKI
Trigger: TATTTTGCGGGGGAGCCACAAGCAAATGGCTTTGTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCACAAAGCCATTTGCTaGTGGCTCCCCCGCAAAATA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHKAIC*WLPRKI
Trigger: TATTTTGCGGGGGAGCCACAAGCAAATGGCTTTGTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCATTTCGTAACATGGTaGATGGCCCTCCTGACACCT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHFVTW*MALLTP
Trigger: AGGTGTCAGGAGGGCCATCAACCATGTTACGAAATG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638951.1
CDS TCA 90 bp AAACTTCCATCTCCCCGTTATCAAGTGCTAACAGACCTTCCCAACTaGTACGAGACTTCAGAGCCTTATATGAGGTCACAAATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: KLPSPRYQVLTDLPN*YETSEPYMRSQILH
Trigger: GTGAAGAATTTGTGACCTCATATAAGGCTCTGAAGTCTCGTATCAGTTGGGAAGGTCTGTTAGCACTTGATAACGGGGAGATGGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 90 bp GTATTGCAGCATTTGAGGCTACACACACTGAAGAACTTGCAGTTTTaGGAAATGTCGTGGAAGCCAAATGCTCTACACTTCTTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: VLQHLRLHTLKNLQF*EMSWKPNALHFFQY
Trigger: ATACTGGAAGAAGTGTAGAGCATTTGGCTTCCACGACATTTCCCAAAACTGCAAGTTCTTCAGTGTGTGTAGCCTCAAATGCTGCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTACCTTGGTCCTTACATaGCCCTGCCATGGTAACTTT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMITLVLT*PCHGNF
Trigger: AAAGTTACCATGGCAGGGCAATGTAAGGACCAAGGT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAACCTTGGTCCTTACATaGCCCTGCCATGGTAACTTT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKTLVLT*PCHGNF
Trigger: AAAGTTACCATGGCAGGGCAATGTAAGGACCAAGGT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGAAGAACTTGCAGTTTaGGGAAATGTCGTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKEELAV*GNVVEA
Trigger: GGCTTCCACGACATTTCCCAAAACTGCAAGTTCTTC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGAAGAACTTGCAGTTTaGGGAAATGTCGTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIEELAV*GNVVEA
Trigger: GGCTTCCACGACATTTCCCAAAACTGCAAGTTCTTC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGTGACCTATGCAAGTaGCATCACAATCGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCDLCK*HHNRCL
Trigger: CAGGCAACGATTGTGATGCAACTTGCATAGGTCACA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCGTCAGTTTTCGCCTTaGTGTGACCTATGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIRQFSP*CDLCKL
Trigger: CAACTTGCATAGGTCACACAAAGGCGAAAACTGACG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACGTCAGTTTTCGCCTTaGTGTGACCTATGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKRQFSP*CDLCKL
Trigger: CAACTTGCATAGGTCACACAAAGGCGAAAACTGACG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAGAAAGGCAGGATTTTaGGGTGGGATCTGGGGAATT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIRKAGF*GGIWGI
Trigger: AATTCCCCAGATCCCACCCAAAAATCCTGCCTTTCT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAACAGAAAATTGGCTTaGAGAGCACCGACGCATCAG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKNRKLA*RAPTHQ
Trigger: CTGATGCGTCGGTGCTCTCAAAGCCAATTTTCTGTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAACAGAAAATTGGCTTaGAGAGCACCGACGCATCAG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMINRKLA*RAPTHQ
Trigger: CTGATGCGTCGGTGCTCTCAAAGCCAATTTTCTGTT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTTGAGCTGTCTTCTTaGCTCAGTCAGTTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILELSS*LSQFLR
Trigger: TCTGAGGAACTGACTGAGCAAAGAAGACAGCTCAAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS TCA 90 bp GCATCACTGGGCATAAGTGAAATGTCTGAATCATGTGCAAGTACTTaGGAAGTGTCTCTAATTTCTGCTAAACTGTGCTCTGTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: ASLGISEMSESCAST*EVSLISAKLCSVCP
Trigger: TGGACAGACAGAGCACAGTTTAGCAGAAATTAGAGACACTTCTCAAGTACTTGCACATGATTCAGACATTTCACTTATGCCCAGTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCTCTGACACTACATTaGACACAGAAATTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPLTLH*TQKLGR
Trigger: CCTTCCCAATTTCTGTGTCAAATGTAGTGTCAGAGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACCTCTGACACTACATTaGACACAGAAATTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKPLTLH*TQKLGR
Trigger: CCTTCCCAATTTCTGTGTCAAATGTAGTGTCAGAGG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCACACACTGAAGAACTaGCAGTTTTGGGAAATGTCG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHTLKN*QFWEMS
Trigger: CGACATTTCCCAAAACTGCAAGTTCTTCAGTGTGTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACACACACTGAAGAACTaGCAGTTTTGGGAAATGTCG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHTLKN*QFWEMS
Trigger: CGACATTTCCCAAAACTGCAAGTTCTTCAGTGTGTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCTGTATTGCAGCATTaGAGGCTACACACACTGAAG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISVLQH*RLHTLK
Trigger: CTTCAGTGTGTGTAGCCTCAAATGCTGCAATACAGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGGAAACAGTAGTATCTaGCTGTTGTTCCTGAGAGTC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKGNSSI*LLFLRV
Trigger: GACTCTCAGGAACAACAGCAAGATACTACTGTTTCC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGGAAACAGTAGTATCTaGCTGTTGTTCCTGAGAGTC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIGNSSI*LLFLRV
Trigger: GACTCTCAGGAACAACAGCAAGATACTACTGTTTCC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGGATGAAAGGATTCTaGGTGCCATGGAGCATAAAC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKWMKGF*VPWSIN
Trigger: GTTTATGCTCCATGGCACCAAGAATCCTTTCATCCA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGGATGAAAGGATTCTaGGTGCCATGGAGCATAAAC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIWMKGF*VPWSIN
Trigger: GTTTATGCTCCATGGCACCAAGAATCCTTTCATCCA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTATTCAACACGGGTTaGCTAGTTGAGCTCATTTGC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVFNTG*LVELIC
Trigger: GCAAATGAGCTCAACTAGCAAACCCGTGTTGAATAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTATTCAACACGGGTTaGCTAGTTGAGCTCATTTGC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVFNTG*LVELIC
Trigger: GCAAATGAGCTCAACTAGCAAACCCGTGTTGAATAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCATTAACACTGTCTTaGGCATCACTGGGCATAAGT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPLTLS*ASLGIS
Trigger: ACTTATGCCCAGTGATGCCAAAGACAGTGTTAATGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp CTTCAAAGGATTGACTTCACGAGTATTCAACACGGGTTTGCTAGTTaGGCTCATTTGCCACAGTGTATCCTGTTTAGCAGTTTCTTTCAT +
Preference number: 5 (lower is better)
Translates to: LQRIDFTSIQHGFAS*AHLPQCILFSSFFH
Trigger: ATGAAAGAAACTGCTAAACAGGATACACTGTGGCAAATGAGCTCAACTAGCAAACCCGTGTTGAATACTCGTGAAGTCAATCCTTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518257.1
ENST00000638951.1
ENST00000643185.2
CDS GCA 90 bp CTCTTTTTCTCTACAGCTCTGCTCACAGTGTGGTACAGTACTGGATaGTGCAAAAGAATCTACAGTAAGAATTCTCTGCTTATCCAAGTA +
Preference number: 5 (lower is better)
Translates to: LFFSTALLTVWYSTG*CKRIYSKNSLLIQV
Trigger: TACTTGGATAAGCAGAGAATTCTTACTGTAGATTCTTTTGCAGCATCCAGTACTGTACCACACTGTGAGCAGAGCTGTAGAGAAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGCTTTTCTTCATGTTaGGAACTGTCTTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCFSSC*ELSSRS
Trigger: TGACCTGGAAGACAGTTCCAAACATGAAGAAAAGCA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGCTTTTCTTCATGTTaGGAACTGTCTTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICFSSC*ELSSRS
Trigger: TGACCTGGAAGACAGTTCCAAACATGAAGAAAAGCA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCACAGAACTATAACCTaGAAGGTCACAACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHRTIT*KVTTFP
Trigger: TGGGAAAGTTGTGACCTTCAAGGTTATAGTTCTGTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACACAGAACTATAACCTaGAAGGTCACAACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHRTIT*KVTTFP
Trigger: TGGGAAAGTTGTGACCTTCAAGGTTATAGTTCTGTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGTAGTATCTTGCTGTaGTTCCTGAGAGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSSILL*FLRVFT
Trigger: TGTGAAGACTCTCAGGAACAACAGCAAGATACTACT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAGTAGTATCTTGCTGTaGTTCCTGAGAGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISSILL*FLRVFT
Trigger: TGTGAAGACTCTCAGGAACAACAGCAAGATACTACT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATGCGCAAGTGTCTTTaGGGTTCTCTAAGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIMRKCL*GSLRVK
Trigger: TTTTACCCTTAGAGAACCCAAAAGACACTTGCGCAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATGCGCAAGTGTCTTTaGGGTTCTCTAAGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKMRKCL*GSLRVK
Trigger: TTTTACCCTTAGAGAACCCAAAAGACACTTGCGCAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTTTGCTTTCCGACTTaGATGCGCAAGTGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFCFPT*MRKCLL
Trigger: CAAAAGACACTTGCGCATCAAAGTCGGAAAGCAAAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTTTGCTTTCCGACTTaGATGCGCAAGTGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFCFPT*MRKCLL
Trigger: CAAAAGACACTTGCGCATCAAAGTCGGAAAGCAAAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGCAGAGTAGGAATTTaGTTCTGGATACAGATGGGT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCRVGI*FWIQMG
Trigger: ACCCATCTGTATCCAGAACAAAATTCCTACTCTGCA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGCAGAGTAGGAATTTaGTTCTGGATACAGATGGGT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICRVGI*FWIQMG
Trigger: ACCCATCTGTATCCAGAACAAAATTCCTACTCTGCA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCTGTAGGCTGTAGTTaGTTTATCTGCAGAGTAGGA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISVGCS*FICRVG
Trigger: TCCTACTCTGCAGATAAACAAACTACAGCCTACAGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCTGTAGGCTGTAGTTaGTTTATCTGCAGAGTAGGA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSVGCS*FICRVG
Trigger: TCCTACTCTGCAGATAAACAAACTACAGCCTACAGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGCCAAACCAATTCTCTaGTCACATTTTAGGGCTAAC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKAKPIL*SHFRAN
Trigger: GTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGCCAAACCAATTCTCTaGTCACATTTTAGGGCTAAC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIAKPIL*SHFRAN
Trigger: GTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACATTGTGAACCAGTTTaGTATCCCCAAACTGCCATA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKHCEPV*YPQTAI
Trigger: TATGGCAGTTTGGGGATACAAAACTGGTTCACAATG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCATTGTGAACCAGTTTaGTATCCCCAAACTGCCATA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIHCEPV*YPQTAI
Trigger: TATGGCAGTTTGGGGATACAAAACTGGTTCACAATG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAGCATATGGAAGACATaGCCTAGGTTTATCTACAGG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISIWKT*PRFIYR
Trigger: CCTGTAGATAAACCTAGGCAATGTCTTCCATATGCT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGCATATGGAAGACATaGCCTAGGTTTATCTACAGG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSIWKT*PRFIYR
Trigger: CCTGTAGATAAACCTAGGCAATGTCTTCCATATGCT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGGATCTACAGGTTTCTaGAAATGCACAAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKGSTGF*KCTKVT
Trigger: TGTCACCTTTGTGCATTTCAAGAAACCTGTAGATCC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp TTTCCTAGTATCTTCAATGTAGATGCTCTGGTACTTATTCCATTCTaGTATATCTGGGCTACATCACTCTGGGGAAGTGCTAAAAAGCAG +
Preference number: 5 (lower is better)
Translates to: FPSIFNVDALVLIPF*YIWATSLWGSAKKQ
Trigger: CTGCTTTTTAGCACTTCCCCAGAGTGATGTAGCCCAGATATATCAGAATGGAATAAGTACCAGAGCATCTACATTGAAGATACTAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp GTTATTCAGAGAGCATGTCCTTTCAGCTCTCTTAGGAAATCCTGTTaGGAGGAATCTCAAAGATGTCATAAGGCGTCCATTATCTACTTT +
Preference number: 5 (lower is better)
Translates to: VIQRACPFSSLRKSC*EESQRCHKASIIYF
Trigger: AAAGTAGATAATGGACGCCTTATGACATCTTTGAGATTCCTCTCAACAGGATTTCCTAAGAGAGCTGAAAGGACATGCTCTCTGAATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS GCA 90 bp TTTTTCTCTACAGCTCTGCTCACAGTGTGGTACAGTACTGGATGCTaGAAAAGAATCTACAGTAAGAATTCTCTGCTTATCCAAGTAAGA +
Preference number: 5 (lower is better)
Translates to: FFSTALLTVWYSTGC*KRIYSKNSLLIQVR
Trigger: TCTTACTTGGATAAGCAGAGAATTCTTACTGTAGATTCTTTTGCAGCATCCAGTACTGTACCACACTGTGAGCAGAGCTGTAGAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS GCA 90 bp AGAGTACTCTGCTCCTTGATTCACATTAAGGGTTATATGCCCAGATaGTCCAAAAGTATGCACAGTATTGGGATTCAATGTATCCTTCAT +
Preference number: 5 (lower is better)
Translates to: RVLCSLIHIKGYMPR*SKSMHSIGIQCILH
Trigger: ATGAAGGATACATTGAATCCCAATACTGTGCATACTTTTGGAGCATCTGGGCATATAACCCTTAATGTGAATCAAGGAGCAGAGTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGACTACTGTACTCTTTaGTATAAGCATTACCGGACT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKDYCTL*YKHYRT
Trigger: AGTCCGGTAATGCTTATACAAAAGAGTACAGTAGTC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGACTACTGTACTCTTTaGTATAAGCATTACCGGACT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIDYCTL*YKHYRT
Trigger: AGTCCGGTAATGCTTATACAAAAGAGTACAGTAGTC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGAGCAATGGCTAAACTaGTATGAATGTTACCCTCAT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIEQWLN*YECYPH
Trigger: ATGAGGGTAACATTCATACAAGTTTAGCCATTGCTC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCAATGAACATTTCTTaGGCCTGGGGTATGTCTTTT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISMNIS*AWGMSF
Trigger: AAAAGACATACCCCAGGCCAAAGAAATGTTCATTGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCAATGAACATTTCTTaGGCCTGGGGTATGTCTTTT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSMNIS*AWGMSF
Trigger: AAAAGACATACCCCAGGCCAAAGAAATGTTCATTGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCTCTAATAATGCAGTaGCTGCTGACACTGCATTAT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSLIMQ*LLTLHY
Trigger: ATAATGCAGTGTCAGCAGCAACTGCATTATTAGAGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCTCTAATAATGCAGTaGCTGCTGACACTGCATTAT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISLIMQ*LLTLHY
Trigger: ATAATGCAGTGTCAGCAGCAACTGCATTATTAGAGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGTTGCATCACAATCGTaGCCTGTACTAGAATTTATG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIVASQS*PVLEFM
Trigger: CATAAATTCTAGTACAGGCAACGATTGTGATGCAAC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGTTGCATCACAATCGTaGCCTGTACTAGAATTTATG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKVASQS*PVLEFM
Trigger: CATAAATTCTAGTACAGGCAACGATTGTGATGCAAC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCCTTCTTCTCTCTTTaGTTAAGCGGATTAGAAACT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPFFSL*LSGLET
Trigger: AGTTTCTAATCCGCTTAACAAAAGAGAGAAGAAGGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACCCTTCTTCTCTCTTTaGTTAAGCGGATTAGAAACT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKPFFSL*LSGLET
Trigger: AGTTTCTAATCCGCTTAACAAAAGAGAGAAGAAGGG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAATTATTCCACAGGTTTaGGTCTACCAACAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKIIPQV*VYQQFS
Trigger: AGAGAACTGTTGGTAGACCAAAACCTGTGGAATAAT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATTATTCCACAGGTTTaGGTCTACCAACAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIIIPQV*VYQQFS
Trigger: AGAGAACTGTTGGTAGACCAAAACCTGTGGAATAAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTGTTGCTTCGTTTATaGGATGATCTGACTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILLLRL*DDLTFW
Trigger: CCAGAAAGTCAGATCATCCAATAAACGAAGCAACAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTGTTGCTTCGTTTATaGGATGATCTGACTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLLLRL*DDLTFW
Trigger: CCAGAAAGTCAGATCATCCAATAAACGAAGCAACAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCTCGAAACCTCTGTTaGTCTAGTTTCTTTGCTATT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPRNLC*SSFFAI
Trigger: AATAGCAAAGAAACTAGACAAACAGAGGTTTCGAGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACCTCGAAACCTCTGTTaGTCTAGTTTCTTTGCTATT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKPRNLC*SSFFAI
Trigger: AATAGCAAAGAAACTAGACAAACAGAGGTTTCGAGG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAGACTGTCACATGAACTaGGTACTATTTTGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKDCHMN*VLFCFR
Trigger: GCGAAAACAAAATAGTACCAAGTTCATGTGACAGTC...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTGACTGTCACATGAACTaGGTACTATTTTGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIDCHMN*VLFCFR
Trigger: GCGAAAACAAAATAGTACCAAGTTCATGTGACAGTC...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTACAGTTAAGTCTATTTaGCTTTCCGACTTTGATGCG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMITVKSI*LSDFDA
Trigger: CGCATCAAAGTCGGAAAGCAAAATAGACTTAACTGT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAACAGTTAAGTCTATTTaGCTTTCCGACTTTGATGCG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKTVKSI*LSDFDA
Trigger: CGCATCAAAGTCGGAAAGCAAAATAGACTTAACTGT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAGAGTACTCTGCTCCTaGATTCACATTAAGGGTTAT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKRVLCS*IHIKGY
Trigger: ATAACCCTTAATGTGAATCAAGGAGCAGAGTACTCT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACAGAAGAATTATATGTaGGGTTACATGCAGACTGTG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKQKNYM*GYMQTV
Trigger: CACAGTCTGCATGTAACCCAACATATAATTCTTCTG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCAGAAGAATTATATGTaGGGTTACATGCAGACTGTG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIQKNYM*GYMQTV
Trigger: CACAGTCTGCATGTAACCCAACATATAATTCTTCTG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTTCGGTTACAGTTCTTaGCTTGACCTTCCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIFGYSS*LDLPFL
Trigger: TAAAAAGGGAAGGTCAAGCAAAGAACTGTAACCGAA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTCGGTTACAGTTCTTaGCTTGACCTTCCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFGYSS*LDLPFL
Trigger: TAAAAAGGGAAGGTCAAGCAAAGAACTGTAACCGAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACCTTTTCCAAATCTTTaGGCCACTGTACAGTTATTC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKPFPNL*ATVQLF
Trigger: GAATAACTGTACAGTGGCCAAAAGATTTGGAAAAGG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCCTTTTCCAAATCTTTaGGCCACTGTACAGTTATTC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIPFPNL*ATVQLF
Trigger: GAATAACTGTACAGTGGCCAAAAGATTTGGAAAAGG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATTCATTTCCATTTTGTaGGCCACTCTTCAATGGCAT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKFISIL*ATLQWH
Trigger: ATGCCATTGAAGAGTGGCCAACAAAATGGAAATGAA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCTTTCATTTCCATTTaGTTGGCCACTCTTCAATGG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISFISI*LATLQW
Trigger: CCATTGAAGAGTGGCCAACAAAATGGAAATGAAAGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS TCA 90 bp CTCTCTTTTGTTAAGCGGATTAGAAACTGTGTTCTTCAAAGGGACTaGCTCAGTGGTAGTATTTTTAGTGCTCAGATGGGAATCAATCAA +
Preference number: 5 (lower is better)
Translates to: LSFVKRIRNCVLQRD*LSGSIFSAQMGINQ
Trigger: TTGATTGATTCCCATCTGAGCACTAAAAATACTACCACTGAGTCAGTCCCTTTGAAGAACACAGTTTCTAATCCGCTTAACAAAAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp GAATTTTTGTCATTCTGTTGTTCAGAAAGAGAGTACTCTGCTCCTTaGTTCACATTAAGGGTTATATGCCCAGATGCTCCAAAAGTATGC +
Preference number: 5 (lower is better)
Translates to: EFLSFCCSEREYSAP*FTLRVICPDAPKVC
Trigger: GCATACTTTTGGAGCATCTGGGCATATAACCCTTAATGTGAATCAAGGAGCAGAGTACTCTCTTTCTGAACAACAGAATGACAAAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 90 bp TCTGTAGGCTGTAGTTTGTTTATCTGCAGAGTAGGAATTTTGTTCTaGATACAGATGGGTTCTGGAGAAGTCATGCATGAGGAATTTTTA +
Preference number: 5 (lower is better)
Translates to: SVGCSLFICRVGILF*IQMGSGEVMHEEFL
Trigger: TAAAAATTCCTCATGCATGACTTCTCCAGAACCCATCTGTATCCAGAACAAAATTCCTACTCTGCAGATAAACAAACTACAGCCTACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 90 bp AACTGCCATAACGACTGCAGATCACAGTTTACATCAAGCCTGCACTaGTTAAGAGTATCATGTATAAAACTATACTCTCTACTATTGGTG +
Preference number: 5 (lower is better)
Translates to: NCHNDCRSQFTSSLH*LRVSCIKLYSLLLV
Trigger: CACCAATAGTAGAGAGTATAGTTTTATACATGATACTCTTAACCAGTGCAGGCTTGATGTAAACTGTGATCTGCAGTCGTTATGGCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518257.1
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAAAAACTGTAGACGTTaGGCAACCAGTCTGATAAAT +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIKNCRR*ATSLIN
Trigger: ATTTATCAGACTGGTTGCCAAACGTCTACAGTTTTT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAAAAACTGTAGACGTTaGGCAACCAGTCTGATAAAT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKKNCRR*ATSLIN
Trigger: ATTTATCAGACTGGTTGCCAAACGTCTACAGTTTTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAACTCTTTAGCCTCATTTaGGTTTTCTCTATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKLFSLI*VFSICL
Trigger: CAAACAGATAGAGAAAACCAAAATGAGGCTAAAGAG...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTCTCTTTAGCCTCATTTaGGTTTTCTCTATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMILFSLI*VFSICL
Trigger: CAAACAGATAGAGAAAACCAAAATGAGGCTAAAGAG...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATATTTATTTCCGGTTTaGTGGCTTCAGTTACATGTG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKYLFPV*WLQLHV
Trigger: CACATGTAACTGAAGCCACAAAACCGGAAATAAATA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTATTTATTTCCGGTTTaGTGGCTTCAGTTACATGTG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIYLFPV*WLQLHV
Trigger: CACATGTAACTGAAGCCACAAAACCGGAAATAAATA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATCCTGTAATAATGTTTaGTTTGGGTCTCTCAATAGG +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKSCNNV*FGSLNR
Trigger: CCTATTGAGAGACCCAAACAAAACATTATTACAGGA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTCCTGTAATAATGTTTaGTTTGGGTCTCTCAATAGG +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMISCNNV*FGSLNR
Trigger: CCTATTGAGAGACCCAAACAAAACATTATTACAGGA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAATGTTTCCATCATCATTaGAAGTTCTACCAAAGTGTC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKCFHHH*KFYQSV
Trigger: GACACTTTGGTAGAACTTCAAATGATGATGGAAACA...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTTGTTTCCATCATCATTaGAAGTTCTACCAAAGTGTC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMICFHHH*KFYQSV
Trigger: GACACTTTGGTAGAACTTCAAATGATGATGGAAACA...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTACACGTACTGCCTCGTaGTTCTTAATAAAATTAACC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMITRTAS*FLIKLT
Trigger: GGTTAATTTTATTAAGAACAACGAGGCAGTACGTGT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAAAGTATGCACAGTATaGGGATTCAATGTATCCTTC +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKKVCTV*GFNVSF
Trigger: GAAGGATACATTGAATCCCAATACTGTGCATACTTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTAAAGTATGCACAGTATaGGGATTCAATGTATCCTTC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIKVCTV*GFNVSF
Trigger: GAAGGATACATTGAATCCCAATACTGTGCATACTTT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp GTGATTCAGCCAAACCAATTCTCTTGTCACATTTTAGGGCTAACCCTTGAGAAAAAGAAGGTGCATTTCTaGACATATGGCAATCAAAGT +
Preference number: 5 (lower is better)
Translates to: VIQPNQFSCHILGLTLEKKKVHF*TYGNQS
Trigger: ACTTTGATTGCCATATGTCAAGAAATGCACCTTCTT...TTTCTCAAGGGTTAGCCCTAAAATGTGACAAGAGAATTGGTTTGGCTGAATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS-3UTR CAA 90 bp AGAGACAGCTCAAGACTGCAGTTACATACTATATCCTGTTGCCCTATGATGATTATCATGTGCAAGTACTaGAGAAGTGTCTCTAATTTC +
Preference number: 5 (lower is better)
Translates to: RDSSRLQLHTISCCPMMIIMCKY*RSVSNF
Trigger: GAAATTAGAGACACTTCTCAAGTACTTGCACATGAT...AATCATCATAGGGCAACAGGATATAGTATGTAACTGCAGTCTTGAGCTGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp TCTGGACTTTCAGAAGAACAAGTTTCTTTAAACTGGTATATCTGGTaGTCGTCATTATTTAGGCTTAATGCAGGCATAGTAGCACTAGCT +
Preference number: 5 (lower is better)
Translates to: SGLSEEQVSLNWYIW*SSLFRLNAGIVALA
Trigger: AGCTAGTGCTACTATGCCTGCATTAAGCCTAAATAATGACGATCACCAGATATACCAGTTTAAAGAAACTTGTTCTTCTGAAAGTCCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp TTTGAATCTAAGACTGATATAAGTACGTCAGTTTTCGCCTTTGTGTaGCCTATGCAAGTTGCATCACAATCGTTGCCTGTACTAGAATTT +
Preference number: 5 (lower is better)
Translates to: FESKTDISTSVFAFV*PMQVASQSLPVLEF
Trigger: AAATTCTAGTACAGGCAACGATTGTGATGCAACTTGCATAGGTCACACAAAGGCGAAAACTGACGTACTTATATCAGTCTTAGATTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp TTTGAAGATTCTCCCTCACTATCTGTCACTGCAGCGGCTGATAACTaGGGAATACTGTACTTTTTACTTGCTATCAAAGTTAGGTTTAAT +
Preference number: 5 (lower is better)
Translates to: FEDSPSLSVTAAADN*GILYFLLAIKVRFN
Trigger: ATTAAACCTAACTTTGATAGCAAGTAAAAAGTACAGTATTCCTCAGTTATCAGCCGCTGCAGTGACAGATAGTGAGGGAGAATCTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp GTAGGCTTGCAGTTCAATGGTATCTTTCAAAGAAGGTGCATTTCTTaGCATATGGCAATCAAAGTTAGGAGAAGGATCCAAAGAAACTTT +
Preference number: 5 (lower is better)
Translates to: VGLQFNGIFQRRCIS*HMAIKVRRRIQRNF
Trigger: AAAGTTTCTTTGGATCCTTCTCCTAACTTTGATTGCCATATGTCAAGAAATGCACCTTCTTTGAAAGATACCATTGAACTGCAAGCCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS CCA 90 bp TGTATTCATAGAAGTACACTGCTGAACTGTAGGCTTGCAGTTCAATaGTATCTTTCAAAGAAGGTGCATTTCTTGACATATGGCAATCAA +
Preference number: 5 (lower is better)
Translates to: CIHRSTLLNCRLAVQ*YLSKKVHFLTYGNQ
Trigger: TTGATTGCCATATGTCAAGAAATGCACCTTCTTTGAAAGATACCATTGAACTGCAAGCCTACAGTTCAGCAGTGTACTTCTATGAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp ACTCAAGTCAAAAGAAAGGGAGATTTCAGAGTTACTCACTGGCCCTaGTTCTTGCCTTATATTATCAACTTTATCTTCACATGGATAATC +
Preference number: 5 (lower is better)
Translates to: TQVKRKGDFRVTHWP*FLPYIINFIFTWII
Trigger: GATTATCCATGTGAAGATAAAGTTGATAATATAAGGCAAGAATCAGGGCCAGTGAGTAACTCTGAAATCTCCCTTTCTTTTGACTTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 90 bp ATTTCTATGATAATCCACAGATGGTCCTGTTTTCCTGGATACGAATaGACTTTAGGAGAGTCCCCACATACATTGATCAACTTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: ISMIIHRWSCFPGYE*TLGESPHTLINFKV
Trigger: TACTTTAAAGTTGATCAATGTATGTGGGGACTCTCCTAAAGTTCATTCGTATCCAGGAAAACAGGACCATCTGTGGATTATCATAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 90 bp CAAATCCTAGAATTTCTCCATCTTCCTTATTTATTTCCGGTTTTGTaGCTTCAGTTACATGTGTGCAAAAACTATCTTTCAATGCAAGGG +
Preference number: 5 (lower is better)
Translates to: QILEFLHLPYLFPVL*LQLHVCKNYLSMQG
Trigger: CCCTTGCATTGAAAGATAGTTTTTGCACACATGTAACTGAAGCCACAAAACCGGAAATAAATAAGGAAGATGGAGAAATTCTAGGATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 90 bp TTACACTGCTATTATAATAAACTGACTGACTTGTACTTTGGGATGTaGAGGATACAGGCAACTGTGATTCAGGATGTTCTTGATTACAAA +
Preference number: 5 (lower is better)
Translates to: LHCYYNKLTDLYFGM*RIQATVIQDVLDYK
Trigger: TTTGTAATCAAGAACATCCTGAATCACAGTTGCCTGTATCCTCCACATCCCAAAGTACAAGTCAGTCAGTTTATTATAATAGCAGTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 90 bp ACAGCACATGGTTTTAATGTGTGTTTGCAATTATTCCACAGGTTTTaGTCTACCAACAGTTCTCTTGAAATCAGGATTTGTTCAACTGAA +
Preference number: 5 (lower is better)
Translates to: TAHGFNVCLQLFHRF*STNSSLEIRICSTE
Trigger: TTCAGTTGAACAAATCCTGATTTCAAGAGAACTGTTGGTAGACCAAAACCTGTGGAATAATTGCAAACACACATTAAAACCATGTGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 90 bp TATATGTTGGGTTACATGCAGACTGTGGAAGTTCATTCCAATATGTaGCAGCATTCTGCATTAGGACTTTTGAATTTTTGTCATTCTGTT +
Preference number: 5 (lower is better)
Translates to: YMLGYMQTVEVHSNM*QHSALGLLNFCHSV
Trigger: AACAGAATGACAAAAATTCAAAAGTCCTAATGCAGAATGCTGCCACATATTGGAATGAACTTCCACAGTCTGCATGTAACCCAACATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS GCA 72 bp AGACTCAATCTTAGCACGGTACAGACCTTCGCCCACTaGCTTCCCTGGAAGCCTCAGGAACACAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: RLNLSTVQTFAH*LPWKPQEHSST
Trigger: GGTGCTGCTGTGTTCCTGAGGCTTCCAGGGAAGGCAGTGGGCGAAGGTCTGTACCGTGCTAAGATTGAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643185.2
CDS GCA 72 bp GTACAGAAGATTAGAATGTGTGCCCTGGGCAGTACTTaGAACTGTGGTCAACAGCCCAGAAGGAGATGGCTG +
Preference number: 6 (lower is better)
Translates to: VQKIRMCALGST*NCGQQPRRRWL
Trigger: CAGCCATCTCCTTCTGGGCTGTTGACCACAGTTGCAAGTACTGCCCAGGGCACACATTCTAATCTTCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp AATGTGACTACTGTACTCTTTTGTATAAGCATTACCGGACTCCTGTaGGGCTCTCTGAGCCTTCTCCTCACTGTGGTTTTGGTTCTCAAC +
Preference number: 6 (lower is better)
Translates to: NVTTVLFCISITGLL*GSLSLLLTVVLVLN
Trigger: GTTGAGAACCAAAACCACAGTGAGGAGAAGGCTCAGAGAGCCCAACAGGAGTCCGGTAATGCTTATACAAAAGAGTACAGTAGTCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp TCTCCCCGTTATCAAGTGCTAACAGACCTTCCCAACTaGTACGAGACTTCAGAGCCTTATATGAGGTCACAA +
Preference number: 6 (lower is better)
Translates to: SPRYQVLTDLPN*YETSEPYMRSQ
Trigger: TTGTGACCTCATATAAGGCTCTGAAGTCTCGTATCAGTTGGGAAGGTCTGTTAGCACTTGATAACGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp GGTCAACAGCCCAGAAGGAGATGGCTGTACTTCATATaGTGTTATCCCTTGGTATGTCTGGGTAATGGCATT +
Preference number: 6 (lower is better)
Translates to: GQQPRRRWLYFI*CYPLVCLGNGI
Trigger: AATGCCATTACCCAGACATACCAAGGGATAACATCATATGAAGTACAGCCATCTCCTTCTGGGCTGTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp TTCTTGGTGCCATGGAGCATAAACCCAAGGAACTTCTaGAGGCACAAATCGATTAGGAAGGTAAGGGTATGT +
Preference number: 6 (lower is better)
Translates to: FLVPWSINPRNF*RHKSIRKVRVC
Trigger: ACATACCCTTACCTTCCTAATCGATTTGTGCCTCCAGAAGTTCCTTGGGTTTATGCTCCATGGCACCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp AATCAGAAGACTGCGAGTCCTGAAAAATGTGACTACTGTACTCTTTaGTATAAGCATTACCGGACTCCTGTTGGGCTCTCTGAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: NQKTASPEKCDYCTL*YKHYRTPVGLSEPS
Trigger: AGAAGGCTCAGAGAGCCCAACAGGAGTCCGGTAATGCTTATACAAAAGAGTACAGTAGTCACATTTTTCAGGACTCGCAGTCTTCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp TGTAACAAGGTGACAAGTAAATGCTATGCCATTCCCTaGGTCTCACATTCCCTAGTTGGTTGGTCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: CNKVTSKCYAIP*VSHSLVGWSSL
Trigger: GAGAGAAGACCAACCAACTAGGGAATGTGAGACTCAGGGAATGGCATAGCATTTACTTGTCACCTTGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518257.1
CDS GCA 72 bp GAAGTGCTAAAAAGCAGAACTGTTCTTCAAGTTCCCTaGAATGTCTTCCACTTTCACGCATCTCTGACCTCT +
Preference number: 6 (lower is better)
Translates to: EVLKSRTVLQVP*NVFHFHASLTS
Trigger: AGAGGTCAGAGATGCGTGAAAGTGGAAGACATTGCAGGGAACTTGAAGAACAGTTCTGCTTTTTAGCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp CATTTGAGGCTACACACACTGAAGAACTTGCAGTTTTaGGAAATGTCGTGGAAGCCAAATGCTCTACACTTC +
Preference number: 6 (lower is better)
Translates to: HLRLHTLKNLQF*EMSWKPNALHF
Trigger: GAAGTGTAGAGCATTTGGCTTCCACGACATTTCCCAAAACTGCAAGTTCTTCAGTGTGTGTAGCCTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp ACTGCGAGTCCTGAAAAATGTGACTACTGTACTCTTTaGTATAAGCATTACCGGACTCCTGTTGGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: TASPEKCDYCTL*YKHYRTPVGLS
Trigger: AGAGAGCCCAACAGGAGTCCGGTAATGCTTATACAAAAGAGTACAGTAGTCACATTTTTCAGGACTCGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp GCATTTGAGGCTACACACACTGAAGAACTTGCAGTTTaGGGAAATGTCGTGGAAGCCAAATGCTCTACACTT +
Preference number: 6 (lower is better)
Translates to: AFEATHTEELAV*GNVVEAKCSTL
Trigger: AAGTGTAGAGCATTTGGCTTCCACGACATTTCCCAAAACTGCAAGTTCTTCAGTGTGTGTAGCCTCAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp GTATTGCAGCATTTGAGGCTACACACACTGAAGAACTaGCAGTTTTGGGAAATGTCGTGGAAGCCAAATGCT +
Preference number: 6 (lower is better)
Translates to: VLQHLRLHTLKN*QFWEMSWKPNA
Trigger: AGCATTTGGCTTCCACGACATTTCCCAAAACTGCAAGTTCTTCAGTGTGTGTAGCCTCAAATGCTGCAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp AGAAGACTATTTTCAGTGTCCTGGATGAAAGGATTCTaGGTGCCATGGAGCATAAACCCAAGGAACTTCTGG +
Preference number: 6 (lower is better)
Translates to: RRLFSVSWMKGF*VPWSINPRNFW
Trigger: CCAGAAGTTCCTTGGGTTTATGCTCCATGGCACCAAGAATCCTTTCATCCAGGACACTGAAAATAGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp CTCTGTTCTCCCATACTTTCTTCTCTCCTCATCAGTCTTGGGTCTTaGATGGATTTTGAAGTAGTGACTGTGCTTGAGCCAGTATTGTTG +
Preference number: 6 (lower is better)
Translates to: LCSPILSSLLISLGS*MDFEVVTVLEPVLL
Trigger: CAACAATACTGGCTCAAGCACAGTCACTACTTCAAAATCCATCAAAGACCCAAGACTGATGAGGAGAGAAGAAAGTATGGGAGAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp TGTATTGCAGCATTTGAGGCTACACACACTGAAGAACTTGCAGTTTaGGGAAATGTCGTGGAAGCCAAATGCTCTACACTTCTTCCAGTA +
Preference number: 6 (lower is better)
Translates to: CIAAFEATHTEELAV*GNVVEAKCSTLLPV
Trigger: TACTGGAAGAAGTGTAGAGCATTTGGCTTCCACGACATTTCCCAAAACTGCAAGTTCTTCAGTGTGTGTAGCCTCAAATGCTGCAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp TTACAACTGGAAACAGTAGTATCTTGCTGTTGTTCCTaGGAGTCTTCACATTTGTCTACAGTGCTCGGTCGT +
Preference number: 6 (lower is better)
Translates to: LQLETVVSCCCS*ESSHLSTVLGR
Trigger: ACGACCGAGCACTGTAGACAAATGTGAAGACTCTCAGGAACAACAGCAAGATACTACTGTTTCCAGTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp ATTGACTTCACGAGTATTCAACACGGGTTTGCTAGTTaGGCTCATTTGCCACAGTGTATCCTGTTTAGCAGT +
Preference number: 6 (lower is better)
Translates to: IDFTSIQHGFAS*AHLPQCILFSS
Trigger: ACTGCTAAACAGGATACACTGTGGCAAATGAGCTCAACTAGCAAACCCGTGTTGAATACTCGTGAAGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518257.1
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp AGAGCATGTCCTTTCAGCTCTCTTAGGAAATCCTGTTaGGAGGAATCTCAAAGATGTCATAAGGCGTCCATT +
Preference number: 6 (lower is better)
Translates to: RACPFSSLRKSC*EESQRCHKASI
Trigger: AATGGACGCCTTATGACATCTTTGAGATTCCTCTCAACAGGATTTCCTAAGAGAGCTGAAAGGACATGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS GCA 72 bp ACAGCTCTGCTCACAGTGTGGTACAGTACTGGATGCTaGAAAAGAATCTACAGTAAGAATTCTCTGCTTATC +
Preference number: 6 (lower is better)
Translates to: TALLTVWYSTGC*KRIYSKNSLLI
Trigger: GATAAGCAGAGAATTCTTACTGTAGATTCTTTTGCAGCATCCAGTACTGTACCACACTGTGAGCAGAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS GCA 72 bp TCTACAGCTCTGCTCACAGTGTGGTACAGTACTGGATaGTGCAAAAGAATCTACAGTAAGAATTCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: STALLTVWYSTG*CKRIYSKNSLL
Trigger: AAGCAGAGAATTCTTACTGTAGATTCTTTTGCAGCATCCAGTACTGTACCACACTGTGAGCAGAGCTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp GTCATTCTGTTGTTCAGAAAGAGAGTACTCTGCTCCTaGATTCACATTAAGGGTTATATGCCCAGATGCTCC +
Preference number: 6 (lower is better)
Translates to: VILLFRKRVLCS*IHIKGYMPRCS
Trigger: GGAGCATCTGGGCATATAACCCTTAATGTGAATCAAGGAGCAGAGTACTCTCTTTCTGAACAACAGAATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp TTCAAAGGATTGACTTCACGAGTATTCAACACGGGTTaGCTAGTTGAGCTCATTTGCCACAGTGTATCCTGT +
Preference number: 6 (lower is better)
Translates to: FKGLTSRVFNTG*LVELICHSVSC
Trigger: ACAGGATACACTGTGGCAAATGAGCTCAACTAGCAAACCCGTGTTGAATACTCGTGAAGTCAATCCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518257.1
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp CTATGCCATTCCCTGAGTCTCACATTCCCTAGTTGGTaGGTCTTCTCTCCAGTTTCGAAAGTCTTTTCATAT +
Preference number: 6 (lower is better)
Translates to: LCHSLSLTFPSW*VFSPVSKVFSY
Trigger: ATATGAAAAGACTTTCGAAACTGGAGAGAAGACCAACCAACTAGGGAATGTGAGACTCAGGGAATGGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518257.1
CDS TCA 72 bp ATTAGTAAGAACAGCACAATCACCAGGGACAACTTCTaGGGAGGAGGCAGAATTAGATGGTGTCGATTTTAT +
Preference number: 6 (lower is better)
Translates to: ISKNSTITRDNF*GGGRIRWCRFY
Trigger: ATAAAATCGACACCATCTAATTCTGCCTCCTCCTCAGAAGTTGTCCCTGGTGATTGTGCTGTTCTTACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp AAGACTGATATAAGTACGTCAGTTTTCGCCTTTGTGTaGCCTATGCAAGTTGCATCACAATCGTTGCCTGTA +
Preference number: 6 (lower is better)
Translates to: KTDISTSVFAFV*PMQVASQSLPV
Trigger: TACAGGCAACGATTGTGATGCAACTTGCATAGGTCACACAAAGGCGAAAACTGACGTACTTATATCAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp GTTAAGCGGATTAGAAACTGTGTTCTTCAAAGGGACTaGCTCAGTGGTAGTATTTTTAGTGCTCAGATGGGA +
Preference number: 6 (lower is better)
Translates to: VKRIRNCVLQRD*LSGSIFSAQMG
Trigger: TCCCATCTGAGCACTAAAAATACTACCACTGAGTCAGTCCCTTTGAAGAACACAGTTTCTAATCCGCTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp ATAATCCACAGATGGTCCTGTTTTCCTGGATACGAATaGACTTTAGGAGAGTCCCCACATACATTGATCAAC +
Preference number: 6 (lower is better)
Translates to: IIHRWSCFPGYE*TLGESPHTLIN
Trigger: GTTGATCAATGTATGTGGGGACTCTCCTAAAGTTCATTCGTATCCAGGAAAACAGGACCATCTGTGGATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS GCA 72 bp TGGGAAGGAAAAATTACCTTGGTCCTTACATTGCCCTaGCATGGTAACTTTATTGGGAGGTATACAGTCATA +
Preference number: 6 (lower is better)
Translates to: WEGKITLVLTLP*HGNFIGRYTVI
Trigger: TATGACTGTATACCTCCCAATAAAGTTACCATGGCAGGGCAATGTAAGGACCAAGGTAATTTTTCCTTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp CATTTCTATGATAATCCACAGATGGTCCTGTTTTCCTaGATACGAATGAACTTTAGGAGAGTCCCCACATAC +
Preference number: 6 (lower is better)
Translates to: HFYDNPQMVLFS*IRMNFRRVPTY
Trigger: GTATGTGGGGACTCTCCTAAAGTTCATTCGTATCCAGGAAAACAGGACCATCTGTGGATTATCATAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp GTAGGCTGTAGTTTGTTTATCTGCAGAGTAGGAATTTaGTTCTGGATACAGATGGGTTCTGGAGAAGTCATG +
Preference number: 6 (lower is better)
Translates to: VGCSLFICRVGI*FWIQMGSGEVM
Trigger: CATGACTTCTCCAGAACCCATCTGTATCCAGAACAAAATTCCTACTCTGCAGATAAACAAACTACAGCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp TCAGTTTCTGTAGGCTGTAGTTTGTTTATCTGCAGAGTAGGAATTTaGTTCTGGATACAGATGGGTTCTGGAGAAGTCATGCATGAGGAA +
Preference number: 6 (lower is better)
Translates to: SVSVGCSLFICRVGI*FWIQMGSGEVMHEE
Trigger: TTCCTCATGCATGACTTCTCCAGAACCCATCTGTATCCAGAACAAAATTCCTACTCTGCAGATAAACAAACTACAGCCTACAGAAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp GTGAATTTCTTCAAAGGATTGACTTCACGAGTATTCAACACGGGTTaGCTAGTTGAGCTCATTTGCCACAGTGTATCCTGTTTAGCAGTT +
Preference number: 6 (lower is better)
Translates to: VNFFKGLTSRVFNTG*LVELICHSVSCLAV
Trigger: AACTGCTAAACAGGATACACTGTGGCAAATGAGCTCAACTAGCAAACCCGTGTTGAATACTCGTGAAGTCAATCCTTTGAAGAAATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518257.1
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp AAATGCACAAAGGTGACAGTAGCATCTTTTCCTTTTCCAAATCTTTaGGCCACTGTACAGTTATTCAGAGAGCATGTCCTTTCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: KCTKVTVASFPFPNL*ATVQLFREHVLSAL
Trigger: GAGAGCTGAAAGGACATGCTCTCTGAATAACTGTACAGTGGCCAAAAGATTTGGAAAAGGAAAAGATGCTACTGTCACCTTTGTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp ACCTTCCCAACTGATACGAGACTTCAGAGCCTTATATaGGGTCACAAATTCTTCACAAAGCATGTTTTCATG +
Preference number: 6 (lower is better)
Translates to: TFPTDTRLQSLI*GHKFFTKHVFM
Trigger: CATGAAAACATGCTTTGTGAAGAATTTGTGACCTCATATAAGGCTCTGAAGTCTCGTATCAGTTGGGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS GCA 72 bp TACGTCAGTTTTCGCCTTTGTGTGACCTATGCAAGTTaGATCACAATCGTTGCCTGTACTAGAATTTATGTT +
Preference number: 6 (lower is better)
Translates to: YVSFRLCVTYAS*ITIVACTRIYV
Trigger: AACATAAATTCTAGTACAGGCAACGATTGTGATGCAACTTGCATAGGTCACACAAAGGCGAAAACTGACGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS GCA 72 bp TGCTCCTTGATTCACATTAAGGGTTATATGCCCAGATaGTCCAAAAGTATGCACAGTATTGGGATTCAATGT +
Preference number: 6 (lower is better)
Translates to: CSLIHIKGYMPR*SKSMHSIGIQC
Trigger: ACATTGAATCCCAATACTGTGCATACTTTTGGAGCATCTGGGCATATAACCCTTAATGTGAATCAAGGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp GGGATAATGAAGAGAAACACTCAGATGAGTCTTGACTaGTTAGCCTCCTCTTTCTCCCATAAATTTTATGTC +
Preference number: 6 (lower is better)
Translates to: GIMKRNTQMSLD*LASSFSHKFYV
Trigger: GACATAAAATTTATGGGAGAAAGAGGAGGCTAACCAGTCAAGACTCATCTGAGTGTTTCTCTTCATTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp TGTAGTTTGTTTATCTGCAGAGTAGGAATTTTGTTCTaGATACAGATGGGTTCTGGAGAAGTCATGCATGAG +
Preference number: 6 (lower is better)
Translates to: CSLFICRVGILF*IQMGSGEVMHE
Trigger: CTCATGCATGACTTCTCCAGAACCCATCTGTATCCAGAACAAAATTCCTACTCTGCAGATAAACAAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp CCAAAAGTATGCACAGTATTGGGATTCAATGTATCCTTCATGTATTaGTCCTCTGACTCAGTTTCTGTAGGCTGTAGTTTGTTTATCTGC +
Preference number: 6 (lower is better)
Translates to: PKVCTVLGFNVSFMY*SSDSVSVGCSLFIC
Trigger: GCAGATAAACAAACTACAGCCTACAGAAACTGAGTCAGAGGACAAATACATGAAGGATACATTGAATCCCAATACTGTGCATACTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp ACATTAAGGGTTATATGCCCAGATGCTCCAAAAGTATGCACAGTATaGGGATTCAATGTATCCTTCATGTATTTGTCCTCTGACTCAGTT +
Preference number: 6 (lower is better)
Translates to: TLRVICPDAPKVCTV*GFNVSFMYLSSDSV
Trigger: AACTGAGTCAGAGGACAAATACATGAAGGATACATTGAATCCCAATACTGTGCATACTTTTGGAGCATCTGGGCATATAACCCTTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp GGCATAAGTGAAATGTCTGAATCATGTGCAAGTACTTaGGAAGTGTCTCTAATTTCTGCTAAACTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: GISEMSESCAST*EVSLISAKLCS
Trigger: AGAGCACAGTTTAGCAGAAATTAGAGACACTTCTCAAGTACTTGCACATGATTCAGACATTTCACTTATGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp ATCAATGAACATTTCTTTGGCCTGGGGTATGTCTTTTaGTTTCGGGAAAGCTTCAGTTATAATGCTAGCATA +
Preference number: 6 (lower is better)
Translates to: INEHFFGLGYVF*FRESFSYNASI
Trigger: TATGCTAGCATTATAACTGAAGCTTTCCCGAAACCAAAAGACATACCCCAGGCCAAAGAAATGTTCATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp GATGAAATAACTGTATCAATGAACATTTCTTTGGCCTaGGGTATGTCTTTTGGTTTCGGGAAAGCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: DEITVSMNISLA*GMSFGFGKASV
Trigger: AACTGAAGCTTTCCCGAAACCAAAAGACATACCCCAGGCCAAAGAAATGTTCATTGATACAGTTATTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp TTATATGCCCAGATGCTCCAAAAGTATGCACAGTATTaGGATTCAATGTATCCTTCATGTATTTGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LYAQMLQKYAQY*DSMYPSCICPL
Trigger: CAGAGGACAAATACATGAAGGATACATTGAATCCCAATACTGTGCATACTTTTGGAGCATCTGGGCATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp GTGAGCCAGGTAGTGATCTTTGCATTTCAACCTTTTTaGGCGTTAAATGATTTCTTTTCAGACTGTCACATG +
Preference number: 6 (lower is better)
Translates to: VSQVVIFAFQPF*ALNDFFSDCHM
Trigger: CATGTGACAGTCTGAAAAGAAATCATTTAACGCCAAAAAAGGTTGAAATGCAAAGATCACTACCTGGCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp GTTATATGCCCAGATGCTCCAAAAGTATGCACAGTATaGGGATTCAATGTATCCTTCATGTATTTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: VICPDAPKVCTV*GFNVSFMYLSS
Trigger: AGAGGACAAATACATGAAGGATACATTGAATCCCAATACTGTGCATACTTTTGGAGCATCTGGGCATATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp ATAAACTTGGATTGCTTACACTGCTATTATAATAAACTGACTGACTaGTACTTTGGGATGTGGAGGATACAGGCAACTGTGATTCAGGAT +
Preference number: 6 (lower is better)
Translates to: INLDCLHCYYNKLTD*YFGMWRIQATVIQD
Trigger: ATCCTGAATCACAGTTGCCTGTATCCTCCACATCCCAAAGTACAAGTCAGTCAGTTTATTATAATAGCAGTGTAAGCAATCCAAGTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 90 bp TTAAGACTTGTCCAATTTAACAAAAGGTCACCATTAACACTGTCTTaGGCATCACTGGGCATAAGTGAAATGTCTGAATCATGTGCAAGT +
Preference number: 6 (lower is better)
Translates to: LRLVQFNKRSPLTLS*ASLGISEMSESCAS
Trigger: ACTTGCACATGATTCAGACATTTCACTTATGCCCAGTGATGCCAAAGACAGTGTTAATGGTGACCTTTTGTTAAATTGGACAAGTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp TATAAAACTATACTCTCTACTATTGGTGTAACAAGGTaGCAAGTAAATGCTATGCCATTCCCTGAGTCTCAC +
Preference number: 6 (lower is better)
Translates to: YKTILSTIGVTR*QVNAMPFPESH
Trigger: GTGAGACTCAGGGAATGGCATAGCATTTACTTGTCACCTTGTTACACCAATAGTAGAGAGTATAGTTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518257.1
CDS GCA 72 bp ACATTAAGGGTTATATGCCCAGATGCTCCAAAAGTATaGACAGTATTGGGATTCAATGTATCCTTCATGTAT +
Preference number: 6 (lower is better)
Translates to: TLRVICPDAPKV*TVLGFNVSFMY
Trigger: ATACATGAAGGATACATTGAATCCCAATACTGTGCATACTTTTGGAGCATCTGGGCATATAACCCTTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp TATTATAATAAACTGACTGACTTGTACTTTGGGATGTaGAGGATACAGGCAACTGTGATTCAGGATGTTCTT +
Preference number: 6 (lower is better)
Translates to: YYNKLTDLYFGM*RIQATVIQDVL
Trigger: AAGAACATCCTGAATCACAGTTGCCTGTATCCTCCACATCCCAAAGTACAAGTCAGTCAGTTTATTATAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS GCA 72 bp GCTGATGTTCTTCTGATAAACTTGGATTGCTTACACTaGTATTATAATAAACTGACTGACTTGTACTTTGGG +
Preference number: 6 (lower is better)
Translates to: ADVLLINLDCLH*YYNKLTDLYFG
Trigger: CCCAAAGTACAAGTCAGTCAGTTTATTATAATAGCAGTGTAAGCAATCCAAGTTTATCAGAAGAACATCAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp ATGGTATCTTTCAAAGAAGGTGCATTTCTTGACATATaGCAATCAAAGTTAGGAGAAGGATCCAAAGAAACT +
Preference number: 6 (lower is better)
Translates to: MVSFKEGAFLDI*QSKLGEGSKET
Trigger: AGTTTCTTTGGATCCTTCTCCTAACTTTGATTGCCATATGTCAAGAAATGCACCTTCTTTGAAAGATACCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638951.1
ENST00000643185.2
CDS TCA 72 bp TCAGAAGAACAAGTTTCTTTAAACTGGTATATCTGGTaGTCGTCATTATTTAGGCTTAATGCAGGCATAGTA +
Preference number: 6 (lower is better)
Translates to: SEEQVSLNWYIW*SSLFRLNAGIV
Trigger: TACTATGCCTGCATTAAGCCTAAATAATGACGATCACCAGATATACCAGTTTAAAGAAACTTGTTCTTCTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CCA 72 bp GAATTTCTCCATCTTCCTTATTTATTTCCGGTTTTGTaGCTTCAGTTACATGTGTGCAAAAACTATCTTTCA +
Preference number: 6 (lower is better)
Translates to: EFLHLPYLFPVL*LQLHVCKNYLS
Trigger: TGAAAGATAGTTTTTGCACACATGTAACTGAAGCCACAAAACCGGAAATAAATAAGGAAGATGGAGAAATTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2
CDS CAA 72 bp TTCCAGGTCAGCGAAGTTTTTCATCTTTCCAGTATTTaGAAGGTATTCATCAATGCTTACTTTCTTTTTGAG +
Preference number: 6 (lower is better)
Translates to: FQVSEVFHLSSI*KVFINAYFLFE
Trigger: CTCAAAAAGAAAGTAAGCATTGATGAATACCTTCAAAATACTGGAAAGATGAAAAACTTCGCTGACCTGGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256246.5
ENST00000638951.1
ENST00000643185.2