Pregenerated sensors for TEX13A (Homo sapiens)
Ensembl gene IDs: ENSG00000268629Ensembl transcript IDs: ENST00000600991.6, ENST00000609007.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCATTCTTAGCCGGGAGGCCGCCTCCTTGCGTTCCGTCTCCTGCTaGTCCCTGAGCTTCTTCAGGTCTGATGCCAAGGCCTGTGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: AILSREAASLRSVSC*SLSFFRSDAKACAA Trigger: AGCCGCACAGGCCTTGGCATCAGACCTGAAGAAGCTCAGGGAGCAGCAGGAGACGGAACGCAAGGAGGCGGCCTCCCGGCTAAGAATGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS GCA 90 bp | TGGGCCATTCTTAGCCGGGAGGCCGCCTCCTTGCGTTCCGTCTCCTaGTGCTCCCTGAGCTTCTTCAGGTCTGATGCCAAGGCCTGTGCG | + |
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Preference number: 5 (lower is better) Translates to: WAILSREAASLRSVS*CSLSFFRSDAKACA Trigger: CGCACAGGCCTTGGCATCAGACCTGAAGAAGCTCAGGGAGCAGCAGGAGACGGAACGCAAGGAGGCGGCCTCCCGGCTAAGAATGGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS CCA 90 bp | CAAGGAGCTGCAGGAGGATTCTCTCCAGCTTCTCTGTGGTCTCCATaGAGGCAGCCCTGGCCTCCACGTGGGGGAACTGGGTCTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: QGAAGGFSPASLWSP*RQPWPPRGGTGSPW Trigger: CCATGGAGACCCAGTTCCCCCACGTGGAGGCCAGGGCTGCCTCCATGGAGACCACAGAGAAGCTGGAGAGAATCCTCCTGCAGCTCCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS CCA 90 bp | CAGCATCTCCAAGGAGCTGCAGGAGGATTCTCTCCAGCTTCTCTGTaGTCTCCATGGAGGCAGCCCTGGCCTCCACGTGGGGGAACTGGG | + |
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Preference number: 5 (lower is better) Translates to: QHLQGAAGGFSPASL*SPWRQPWPPRGGTG Trigger: CCCAGTTCCCCCACGTGGAGGCCAGGGCTGCCTCCATGGAGACCACAGAGAAGCTGGAGAGAATCCTCCTGCAGCTCCTTGGAGATGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS GCA 90 bp | CTGAGCTTCTTCAGGTCTGATGCCAAGGCCTGTGCGGCTGATTTGTaGAGTTTGGCGAAGCCGTGCAGCCACCGCACCCTGTGCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LSFFRSDAKACAADL*SLAKPCSHRTLCLC Trigger: ACAAAGGCACAGGGTGCGGTGGCTGCACGGCTTCGCCAAACTGCACAAATCAGCCGCACAGGCCTTGGCATCAGACCTGAAGAAGCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS CCA 90 bp | TCTTCAGGTCTGATGCCAAGGCCTGTGCGGCTGATTTGTGCAGTTTaGCGAAGCCGTGCAGCCACCGCACCCTGTGCCTTTGTAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SSGLMPRPVRLICAV*RSRAATAPCAFVAV Trigger: CACAGCTACAAAGGCACAGGGTGCGGTGGCTGCACGGCTTCGCCAAACTGCACAAATCAGCCGCACAGGCCTTGGCATCAGACCTGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS CCA 90 bp | ATGAGGCTCTGGACCAGGGGTTCGTGGTTCCAGAGAAATAAGATGTaGCTGTTTCGACCGACCGGAGATCTCCCTCCTTCTGCCCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: MRLWTRGSWFQRNKM*LFRPTGDLPPSAPN Trigger: ATTGGGGGCAGAAGGAGGGAGATCTCCGGTCGGTCGAAACAGCCACATCTTATTTCTCTGGAACCACGAACCCCTGGTCCAGAGCCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS CCA 90 bp | GCTAGTATCAAAGGCCTCCCAGTCGGAAGGCAGCTGAGGCGGAACTaGTGCTGTGACTGTTGCTTGTGGAGGGGATATAGTGGGTATGTC | + |
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Preference number: 5 (lower is better) Translates to: ASIKGLPVGRQLRRN*CCDCCLWRGYSGYV Trigger: GACATACCCACTATATCCCCTCCACAAGCAACAGTCACAGCACCAGTTCCGCCTCAGCTGCCTTCCGACTGGGAGGCCTTTGATACTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS GCA 72 bp | AGCCGGGAGGCCGCCTCCTTGCGTTCCGTCTCCTGCTaGTCCCTGAGCTTCTTCAGGTCTGATGCCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SREAASLRSVSC*SLSFFRSDAKA Trigger: GGCCTTGGCATCAGACCTGAAGAAGCTCAGGGAGCAGCAGGAGACGGAACGCAAGGAGGCGGCCTCCCGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS GCA 72 bp | CTTAGCCGGGAGGCCGCCTCCTTGCGTTCCGTCTCCTaGTGCTCCCTGAGCTTCTTCAGGTCTGATGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSREAASLRSVS*CSLSFFRSDAK Trigger: CTTGGCATCAGACCTGAAGAAGCTCAGGGAGCAGCAGGAGACGGAACGCAAGGAGGCGGCCTCCCGGCTAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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| CDS CCA 72 bp | CTGATGCCAAGGCCTGTGCGGCTGATTTGTGCAGTTTaGCGAAGCCGTGCAGCCACCGCACCCTGTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LMPRPVRLICAV*RSRAATAPCAF Trigger: AAAGGCACAGGGTGCGGTGGCTGCACGGCTTCGCCAAACTGCACAAATCAGCCGCACAGGCCTTGGCATCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600991.6 ENST00000609007.3 |
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