RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TET3 (Homo sapiens)

Ensembl gene IDs: ENSG00000187605

Ensembl transcript IDs: ENST00000305799.8, ENST00000409262.8, ENST00000475405.2, ENST00000496886.1

Found 824 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGAACTGGGTGGCTACCGTCCGCGCTTGGCTCTCGAGGGGCAGATaGCTGAGGACCTCGCCAGCGCCCGAGGGGCTTGGCTCGCCAGAC +
Preference number: 1 (lower is better)
Translates to: MNWVATVRAWLSRGR*LRTSPAPEGLGSPD
Trigger: GTCTGGCGAGCCAAGCCCCTCGGGCGCTGGCGAGGTCCTCAGCCATCTGCCCCTCGAGAGCCAAGCGCGGACGGTAGCCACCCAGTTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp CCTCGCCAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTaGGCGGGGGAGCACTACTGGCCTTTCCTGCCCATCCTTTACCAT +
Preference number: 1 (lower is better)
Translates to: PRQRPRGLARQTQRD*AGEHYWPFLPILYH
Trigger: ATGGTAAAGGATGGGCAGGAAAGGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTGGCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp GGGTGTATGTCGGGAGGGATGAACTGGGTGGCTACCGTCCGCGCTTaGCTCTCGAGGGGCAGATGGCTGAGGACCTCGCCAGCGCCCGAG +
Preference number: 1 (lower is better)
Translates to: GCMSGGMNWVATVRA*LSRGRWLRTSPAPE
Trigger: CTCGGGCGCTGGCGAGGTCCTCAGCCATCTGCCCCTCGAGAGCCAAGCGCGGACGGTAGCCACCCAGTTCATCCCTCCCGACATACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp GCTGGGTCAGAGAATGAAGCCCCTGCCCACCATGGTCCCAGCCAGTaGCAGGGGAGGAAGGAGATCCATCTGGTCTCCCTTGGTGTGCCC +
Preference number: 1 (lower is better)
Translates to: AGSENEAPAHHGPSQ*QGRKEIHLVSLGVP
Trigger: GGGCACACCAAGGGAGACCAGATGGATCTCCTTCCTCCCCTGGCACTGGCTGGGACCATGGTGGGCAGGGGCTTCATTCTCTGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp GCCAGTGCCAGGGGAGGAAGGAGATCCATCTGGTCTCCCTTGGTGTaGCCTTGGGACTCCCAGAGATGTCTGCTTAGCACCCTGGGCTGC +
Preference number: 1 (lower is better)
Translates to: ASARGGRRSIWSPLV*PWDSQRCLLSTLGC
Trigger: GCAGCCCAGGGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCAGATGGATCTCCTTCCTCCCCTGGCACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp TCTACTTCCAACCTGGTTTCTGGGGAAAGCTATGCCAGCATCTCGTaGGGCTGGCCTGGGGTGCATCTGCCCTTCGACTCCAAGCCGGGG +
Preference number: 1 (lower is better)
Translates to: STSNLVSGESYASIS*GWPGVHLPFDSKPG
Trigger: CCCCGGCTTGGAGTCGAAGGGCAGATGCACCCCAGGCCAGCCCCACGAGATGCTGGCATAGCTTTCCCCAGAAACCAGGTTGGAAGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp GCCAGGGGAGGAAGGAGATCCATCTGGTCTCCCTTGGTGTGCCCTTaGGACTCCCAGAGATGTCTGCTTAGCACCCTGGGCTGCAGGAGA +
Preference number: 1 (lower is better)
Translates to: ARGGRRSIWSPLVCP*DSQRCLLSTLGCRR
Trigger: TCTCCTGCAGCCCAGGGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCAGATGGATCTCCTTCCTCCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp TCCCAGCCAGTGCCAGGGGAGGAAGGAGATCCATCTGGTCTCCCTTaGTGTGCCCTTGGGACTCCCAGAGATGTCTGCTTAGCACCCTGG +
Preference number: 1 (lower is better)
Translates to: SQPVPGEEGDPSGLP*CALGTPRDVCLAPW
Trigger: CCAGGGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCAGATGGATCTCCTTCCTCCCCTGGCACTGGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp CCCACCATGGTCCCAGCCAGTGCCAGGGGAGGAAGGAGATCCATCTaGTCTCCCTTGGTGTGCCCTTGGGACTCCCAGAGATGTCTGCTT +
Preference number: 1 (lower is better)
Translates to: PTMVPASARGGRRSI*SPLVCPWDSQRCLL
Trigger: AAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCAGATGGATCTCCTTCCTCCCCTGGCACTGGCTGGGACCATGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp CCATCTGGTCTCCCTTGGTGTGCCCTTGGGACTCCCAGAGATGTCTaGTTAGCACCCTGGGCTGCAGGAGAAAATCTGTCCCTGGCTATG +
Preference number: 1 (lower is better)
Translates to: PSGLPWCALGTPRDV*LAPWAAGENLSLAM
Trigger: CATAGCCAGGGACAGATTTTCTCCTGCAGCCCAGGGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 90 bp CACGCACACCATCGTCACCTTGGTGAGAAGGCAAAGCAGTACCCATaGAGCCGGGGTGTGGGAAACATTGGCCCTGCTAAAAGCCAGACC +
Preference number: 1 (lower is better)
Translates to: HAHHRHLGEKAKQYP*SRGVGNIGPAKSQT
Trigger: GGTCTGGCTTTTAGCAGGGCCAATGTTTCCCACACCCCGGCTTCATGGGTACTGCTTTGCCTTCTCACCAAGGTGACGATGGTGTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp GTGGAGACTAGCAAGCTTGAAGCCATCTACTTCCAACCTGGTTTCTaGGGAAAGCTATGCCAGCATCTCGTGGGGCTGGCCTGGGGTGCA +
Preference number: 1 (lower is better)
Translates to: VETSKLEAIYFQPGF*GKLCQHLVGLAWGA
Trigger: TGCACCCCAGGCCAGCCCCACGAGATGCTGGCATAGCTTTCCCCAGAAACCAGGTTGGAAGTAGATGGCTTCAAGCTTGCTAGTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp AAGACAAATTCCTTCAGCTCAGCATGCATTGGCTTGGCAACATGGTaGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGG +
Preference number: 1 (lower is better)
Translates to: KTNSFSSACIGLATW*ARPLRTSHSSSSVR
Trigger: CCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAAGCCAATGCATGCTGAGCTGAAGGAATTTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp CTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTaGGGTATCATCTCTTTCCACGCACACCATCGTCACCTTGGTGAG +
Preference number: 1 (lower is better)
Translates to: LLFPKEAGGRTKRGR*GIISFHAHHRHLGE
Trigger: CTCACCAAGGTGACGATGGTGTGCGTGGAAAGAGATGATACCCCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 90 bp TTTCTGCAGACTCTCCCATCCTATCAGAGAGGACAGAAGCTGTCCTaGGGCTCCCTTCCCCAAAGGGAAGGGGTGTATGTCGGGAGGGAT +
Preference number: 1 (lower is better)
Translates to: FLQTLPSYQRGQKLS*GSLPQREGVYVGRD
Trigger: ATCCCTCCCGACATACACCCCTTCCCTTTGGGGAAGGGAGCCTCAGGACAGCTTCTGTCCTCTCTGATAGGATGGGAGAGTCTGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp ACTAAGACAAATTCCTTCAGCTCAGCATGCATTGGCTTGGCAACATaGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTG +
Preference number: 1 (lower is better)
Translates to: TKTNSFSSACIGLAT*WARPLRTSHSSSSV
Trigger: CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAAGCCAATGCATGCTGAGCTGAAGGAATTTGTCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp CCTTGGTGTGCCCTTGGGACTCCCAGAGATGTCTGCTTAGCACCCTaGGCTGCAGGAGAAAATCTGTCCCTGGCTATGAGAATGCCTATC +
Preference number: 1 (lower is better)
Translates to: PWCALGTPRDVCLAP*AAGENLSLAMRMPI
Trigger: GATAGGCATTCTCATAGCCAGGGACAGATTTTCTCCTGCAGCCCAGGGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 90 bp AGGCCCCCGAACCCAATGACAGCATGGAGGAAGCAGGCTCAGGTGTaGGGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGAT +
Preference number: 1 (lower is better)
Translates to: RPPNPMTAWRKQAQV*GMHHCPMWKFRDQD
Trigger: ATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCCTCACACCTGAGCCTGCTTCCTCCATGCTGTCATTGGGTTCGGGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp AAAGTCCCAGCACAACACTACAGCACCAGGCTCCGCACAGCACCATaGACAGAGCACCACTGGCTTTTCACAGCTTGGGTTCAACTTCCT +
Preference number: 1 (lower is better)
Translates to: KVPAQHYSTRLRTAP*TEHHWLFTAWVQLP
Trigger: AGGAAGTTGAACCCAAGCTGTGAAAAGCCAGTGGTGCTCTGTGCATGGTGCTGTGCGGAGCCTGGTGCTGTAGTGTTGTGCTGGGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp TCTGGAAACGCCATTCTGCGGGGAGTGGGGACATCCAATGGAGACTaGCTCTTGACTCACCTCTCAGCAGCCTATCTCCTACTGCAGAAA +
Preference number: 1 (lower is better)
Translates to: SGNAILRGVGTSNGD*LLTHLSAAYLLLQK
Trigger: TTTCTGCAGTAGGAGATAGGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCATTGGATGTCCCCACTCCCCGCAGAATGGCGTTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp GCCAAGCCAGGCAGGCCCACTCCCGATCACAGAAAGGGAGATAGCTaGCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATA +
Preference number: 1 (lower is better)
Translates to: AKPGRPTPDHRKGDS*LLDLLCLATKGRTI
Trigger: TATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGATCGGGAGTGGGCCTGCCTGGCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp GTGTGCCCTTGGGACTCCCAGAGATGTCTGCTTAGCACCCTGGGCTaGAGGAGAAAATCTGTCCCTGGCTATGAGAATGCCTATCATGCT +
Preference number: 1 (lower is better)
Translates to: VCPWDSQRCLLSTLG*RRKSVPGYENAYHA
Trigger: AGCATGATAGGCATTCTCATAGCCAGGGACAGATTTTCTCCTGCAGCCCAGGGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp AAACCCTTCGCCCTTTCTTTCACATCAAGCCTGAGAAGACAGGTGTaGAACCAAAAAGCACCTGCCAAGCCAGGCAGGCCCACTCCCGAT +
Preference number: 1 (lower is better)
Translates to: KPFALSFTSSLRRQV*NQKAPAKPGRPTPD
Trigger: ATCGGGAGTGGGCCTGCCTGGCTTGGCAGGTGCTTTTTGGTTCCACACCTGTCTTCTCAGGCTTGATGTGAAAGAAAGGGCGAAGGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp GCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTaGACAGGGCACACTGGGGAGATGACTAAGACGCCATCGATTTCC +
Preference number: 1 (lower is better)
Translates to: AEKEPNVCTARGWCP*TGHTGEMTKTPSIS
Trigger: GGAAATCGATGGCGTCTTAGTCATCTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 90 bp GCAAAGAAAGCTCCTTCCTTTAGTCCGAACATAAGGGGTTACCAATaGGAGGCAGAAGCAACGCTGGGTCAGAGAATGAAGCCCCTGCCC +
Preference number: 1 (lower is better)
Translates to: AKKAPSFSPNIRGYQ*EAEATLGQRMKPLP
Trigger: GGGCAGGGGCTTCATTCTCTGACCCAGCGTTGCTTCTGCCTCTCATTGGTAACCCCTTATGTTCGGACTAAAGGAAGGAGCTTTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp AATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTaGGGCTTCCACGGGTCATACAGACGGTCACATTCTCCAAATGTT +
Preference number: 1 (lower is better)
Translates to: NHLGYTRDLPNQQPT*GFHGSYRRSHSPNV
Trigger: AACATTTGGAGAATGTGACCGTCTGTATGACCCGTGGAAGCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp AGACCACATAAATGCTCAGGACATCTTACAACGACCCTCCGCCAGTaGTTCCAAACAGATACAGTAAACACCCAGCAGGCCGGTTCTCAG +
Preference number: 1 (lower is better)
Translates to: RPHKCSGHLTTTLRQ*FQTDTVNTQQAGSQ
Trigger: CTGAGAACCGGCCTGCTGGGTGTTTACTGTATCTGTTTGGAAGCACTGGCGGAGGGTCGTTGTAAGATGTCCTGAGCATTTATGTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp GGCCCACTCCCGATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTaGTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACACAA +
Preference number: 1 (lower is better)
Translates to: GPLPITEREIAAFST*FVWPPREEQYNTTQ
Trigger: TTGTGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGATCGGGAGTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp CACTACAGCACCAGGCTCCGCACAGCACCATGCACAGAGCACCACTaGCTTTTCACAGCTTGGGTTCAACTTCCTGTTTTTAAAGATACA +
Preference number: 1 (lower is better)
Translates to: HYSTRLRTAPCTEHH*LFTAWVQLPVFKDT
Trigger: TGTATCTTTAAAAACAGGAAGTTGAACCCAAGCTGTGAAAAGCCAGTGGTGCTCTGTGCATGGTGCTGTGCGGAGCCTGGTGCTGTAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 90 bp TGCATTAACTGTTGTTACACTGGTCTGCTGAGCTCCTGTAGGATGTaGCCTGCCCAAGAGTCAAGAAAGTCCCAGCACAACACTACAGCA +
Preference number: 1 (lower is better)
Translates to: CINCCYTGLLSSCRM*PAQESRKSQHNTTA
Trigger: TGCTGTAGTGTTGTGCTGGGACTTTCTTGACTCTTGGGCAGGTCACATCCTACAGGAGCTCAGCAGACCAGTGTAACAACAGTTAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp AACATACATCAGGAAGATTCACACATGCCAAGTATCAGAATCACCTaGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCT +
Preference number: 1 (lower is better)
Translates to: NIHQEDSHMPSIRIT*VTLGTFQTNSQPGA
Trigger: AGCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGATACTTGGCATGTGTGAATCTTCCTGATGTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATaGATTAACTGTTGTTACACTGGTCTGCTGAGCTCCTGTAGGATG +
Preference number: 1 (lower is better)
Translates to: GMHHCPMWKFRDQDR*INCCYTGLLSSCRM
Trigger: CATCCTACAGGAGCTCAGCAGACCAGTGTAACAACAGTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp GTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTaGCTAATAAAACTAGGTTTTGAGGGAGTCATTTCAAATGACAGC +
Preference number: 1 (lower is better)
Translates to: VQGMLKLAMYYSRGS*LIKLGFEGVISNDS
Trigger: GCTGTCATTTGAAATGACTCCCTCAAAACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACATACCCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp GACCCCAGATTTTTCAAGGTCAAGTATGTCATCAGACGGACAACCTaGAGGTATCAGACCCTCATGGAATCTACTTTACTGAAGTTGTCA +
Preference number: 1 (lower is better)
Translates to: DPRFFKVKYVIRRTT*RYQTLMESTLLKLS
Trigger: TGACAACTTCAGTAAAGTAGATTCCATGAGGGTCTGATACCTGCAGGTTGTCCGTCTGATGACATACTTGACCTTGAAAAATCTGGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 90 bp TATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTaGTACAAAGCAGTTAAGCTCTGCTACTTCTTTCCTTGCTTTAGC +
Preference number: 1 (lower is better)
Translates to: YHRLIVNRPCTSTAV*YKAVKLCYFFPCFS
Trigger: GCTAAAGCAAGGAAAGAAGTAGCAGAGCTTAACTGCTTTGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 90 bp ACTCAAGGCACCCGGAAGCTCAGGAACTTGCCTATAGCGGTCATCTaGTTGTTAAACATGATTCATGAAGACCCATATCTGAATACAACT +
Preference number: 1 (lower is better)
Translates to: TQGTRKLRNLPIAVI*LLNMIHEDPYLNTT
Trigger: AGTTGTATTCAGATATGGGTCTTCATGAATCATGTTTAACAATCAGATGACCGCTATAGGCAAGTTCCTGAGCTTCCGGGTGCCTTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp ACTGCTGTGTGGTACAAAGCAGTTAAGCTCTGCTACTTCTTTCCTTaGTTTAGCGCTTTAAAAATCCCTTGCTCTGCAAACTACTGTTCC +
Preference number: 1 (lower is better)
Translates to: TAVWYKAVKLCYFFP*FSALKIPCSANYCS
Trigger: GGAACAGTAGTTTGCAGAGCAAGGGATTTTTAAAGCGCTAAAGCAAGGAAAGAAGTAGCAGAGCTTAACTGCTTTGTACCACACAGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 90 bp CTCTCAATGAAATTAGGTTATCATCGACTCATTGTCAACCGTCCTTaGACATCTACTGCTGTGTGGTACAAAGCAGTTAAGCTCTGCTAC +
Preference number: 1 (lower is better)
Translates to: LSMKLGYHRLIVNRP*TSTAVWYKAVKLCY
Trigger: GTAGCAGAGCTTAACTGCTTTGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAACCTAATTTCATTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 90 bp ACTGGGGAGATGACTAAGACGCCATCGATTTCCGTTGCTATAATATaGCTCTTCGAACTTGGTCATGCTGTTAGGTTCTTTAGTTGCAAT +
Preference number: 1 (lower is better)
Translates to: TGEMTKTPSISVAII*LFELGHAVRFFSCN
Trigger: ATTGCAACTAAAGAACCTAACAGCATGACCAAGTTCGAAGAGTCATATTATAGCAACGGAAATCGATGGCGTCTTAGTCATCTCCCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 90 bp GCAACACCTTTAGTCAAGATTTCTGATGGTCAGATGATGATTTCTTaGGCTAGCACCAGTTATTTTGTGAGAACCTGCTGCGAAGCGATT +
Preference number: 1 (lower is better)
Translates to: ATPLVKISDGQMMIS*ASTSYFVRTCCEAI
Trigger: AATCGCTTCGCAGCAGGTTCTCACAAAATAACTGGTGCTAGCTCAAGAAATCATCATCTGACCATCAGAAATCTTGACTAAAGGTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACGGCCAGGCCCGACGCTaGGGTACGCTGGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHGQARR*GTLAPW
Trigger: CCAGGGAGCCAGCGTACCTCAGCGTCGGGCCTGGCC...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACAGCGCCCGAGGGGCTTaGCTCGCCAGACCCAGCGAG +
Preference number: 2 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNSARGA*LARPSE
Trigger: CTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCT...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACGGCCTGGGGTGCATCTaGCCTTCGACTCCAAGCCGG +
Preference number: 2 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNGLGCI*PSTPSR
Trigger: CCGGCTTGGAGTCGAAGGGCAGATGCACCCCAGGCC...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACCAGACCCAGCGAGACTaGGCGGGGGAGCACTACTGG +
Preference number: 2 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNQTQRD*AGEHYW
Trigger: CCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTG...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 90 bp GTCCCAGCCAGTGCCAGGGGAGGAAGGAGATCCATCTGGTCTCCCTaGGTGTGCCCTTGGGACTCCCAGAGATGTCTGCTTAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: VPASARGGRRSIWSP*VCPWDSQRCLLSTL
Trigger: CAGGGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCAGATGGATCTCCTTCCTCCCCTGGCACTGGCTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACTTCTGGGGAAAGCTATaGCAGCATCTCGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNFWGKL*QHLVGL
Trigger: CAGCCCCACGAGATGCTGGCATAGCTTTCCCCAGAA...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCTCGGGAGGGATGAACTaGGTGGCTACCGTCCGCGCT +
Preference number: 2 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGSGGMN*VATVRA
Trigger: AGCGCGGACGGTAGCCACCCAGTTCATCCCTCCCGA...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGCAGCATGCATTGGCTTaGCAACATGGTGGGCACGGC +
Preference number: 2 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWQHALA*QHGGHG
Trigger: GCCGTGCCCACCATGTTGCCAAGCCAATGCATGCTG...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGTGGTCATCCACCGTGTaGCCACATTCCCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEWSSTV*PHSPLC
Trigger: ACACAGAGGGGAATGTGGCCACACGGTGGATGACCA...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAAGCATCTCGTGGGGCTaGCCTGGGGTGCATCTGCCC +
Preference number: 2 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSSISWG*PGVHLP
Trigger: GGGCAGATGCACCCCAGGCCAGCCCCACGAGATGCT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGAGCTCCTGTAGGATGTaGCCTGCCCAAGAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWSSCRM*PAQESR
Trigger: TCTTGACTCTTGGGCAGGTCACATCCTACAGGAGCT...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGTACAAGCACTTCCCTTaGACGCAACAGGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: GLCSGEKPIALLLPAALQYKHFP*TQQAGK
Trigger: TTTCCCTGCCTGTTGCGTGCAAGGGAAGTGCTTGTA...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 90 bp AACGCCATTCTGCGGGGAGTGGGGACATCCAATGGAGACTGCCTCTaGACTCACCTCTCAGCAGCCTATCTCCTACTGCAGAAACTGATG +
Preference number: 2 (lower is better)
Translates to: NAILRGVGTSNGDCL*THLSAAYLLLQKLM
Trigger: CATCAGTTTCTGCAGTAGGAGATAGGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCATTGGATGTCCCCACTCCCCGCAGAATGGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAGGGGCTGGCCTGGGGTaGATCTGCCCTTCGACTCCA +
Preference number: 2 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTGAGLG*ICPSTP
Trigger: TGGAGTCGAAGGGCAGATGCACCCCAGGCCAGCCCC...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCTGCACAGAGCACCACTaGCTTTTCACAGCTTGGGTT +
Preference number: 2 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGCTEHH*LFTAWV
Trigger: AACCCAAGCTGTGAAAAGCCAGTGGTGCTCTGTGCA...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGTGCACTGCACGTGGATaGTGTCCGTGGACAGGGCAC +
Preference number: 2 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRCTARG*CPWTGH
Trigger: GTGCCCTGTCCACGGACACCATCCACGTGCAGTGCA...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGACTACTGGCCTTTCCTaGCCATCCTTTACCATTACT +
Preference number: 2 (lower is better)
Translates to: GLCSGEKPIALLLPAALQTTGLS*PSFTIT
Trigger: AGTAATGGTAAAGGATGGGCAGGAAAGGCCAGTAGT...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGACATCCAATGGAGACTaGCTCTTGACTCACCTCTCA +
Preference number: 2 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWTSNGD*LLTHLS
Trigger: TGAGAGGTGAGTCAAGAGGCAGTCTCCATTGGATGT...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGCGGGGGAGCACTACTaGCCTTTCCTGCCCATCCTT +
Preference number: 2 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVAGEHY*PFLPIL
Trigger: AAGGATGGGCAGGAAAGGCCAGTAGTGCTCCCCCGC...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCTTCCAACCTGGTTTCTaGGGAAAGCTATGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGFQPGF*GKLCQH
Trigger: ATGCTGGCATAGCTTTCCCCAGAAACCAGGTTGGAA...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGAACCCAATGACAGCATaGAGGAAGCAGGCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGNPMTA*RKQAQV
Trigger: CACCTGAGCCTGCTTCCTCCATGCTGTCATTGGGTT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGTCCTTCAGCTCAGCATaGATTGGCTTGGCAACATGG +
Preference number: 2 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGSFSSA*IGLATW
Trigger: CCATGTTGCCAAGCCAATGCATGCTGAGCTGAAGGA...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATATGCCAGCATCTCGTaGGGCTGGCCTGGGGTGCAT +
Preference number: 2 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAYASIS*GWPGVH
Trigger: ATGCACCCCAGGCCAGCCCCACGAGATGCTGGCATA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGTATGTCGGGAGGGATaGACTGGGTGGCTACCGTCC +
Preference number: 2 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGVCREG*TGWLPS
Trigger: GGACGGTAGCCACCCAGTTCATCCCTCCCGACATAC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTGGACAGAAGCTGTCCTaGGGCTCCCTTCCCCAAAGG +
Preference number: 2 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGGQKLS*GSLPQR
Trigger: CCTTTGGGGAAGGGAGCCTCAGGACAGCTTCTGTCC...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAGCAAAGCAGTACCCATaGAGCCGGGGTGTGGGAAAC +
Preference number: 2 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAAKQYP*SRGVGN
Trigger: GTTTCCCACACCCCGGCTTCATGGGTACTGCTTTGC...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGGAGTCAAATGAGACCTaGATAAAAGTACTGATGCGA +
Preference number: 2 (lower is better)
Translates to: GLCSGEKPIALLLPAALQESNET*IKVLMR
Trigger: TCGCATCAGTACTTTTATGCAGGTCTCATTTGACTC...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGGATCAAATGGAGAAATaGCACCAATTAGGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: GLCSGEKPIALLLPAALQDQMEK*HQLGRK
Trigger: TTTCCTCCCTAATTGGTGCCATTTCTCCATTTGATC...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCAAGGCTGTTTGGGCTaGGGGACAGACGTCGCATGC +
Preference number: 2 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQQGCLG*GTDVAC
Trigger: GCATGCGACGTCTGTCCCCCAGCCCAAACAGCCTTG...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 90 bp AGGCCCACTCCCGATCACAGAAAGGGAGATAGCTGCCTTCTCGACTaGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACACA +
Preference number: 2 (lower is better)
Translates to: RPTPDHRKGDSCLLD*LCLATKGRTIQHNT
Trigger: TGTGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGATCGGGAGTGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGAAATCAGCATGGGCTTaGGCACGGCAACCACACCGC +
Preference number: 2 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQKSAWA*ARQPHR
Trigger: GCGGTGTGGTTGCCGTGCTCAAGCCCATGCTGATTT...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGAAAGAACCGAATGAATaGACCAGAATTTCAGAACAG +
Preference number: 2 (lower is better)
Translates to: GLCSGEKPIALLLPAALQKEPNE*TRISEQ
Trigger: CTGTTCTGAAATTCTGGTGCATTCATTCGGTTCTTT...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAACGACCCTCCGCCAGTaGTTCCAAACAGATACAGTA +
Preference number: 2 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSTTLRQ*FQTDTV
Trigger: TACTGTATCTGTTTGGAAGCACTGGCGGAGGGTCGT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGGCCATCGATTTCCGTTaGTATAATATGACTCTTCGA +
Preference number: 2 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWAIDFR*YNMTLR
Trigger: TCGAAGAGTCATATTATAGCAACGGAAATCGATGGC...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGAAAGCAGTTAAGCTCTaGTACTTCTTTCCTTGCTTT +
Preference number: 2 (lower is better)
Translates to: GLCSGEKPIALLLPAALQKAVKL*YFFPCF
Trigger: AAAGCAAGGAAAGAAGTAGCAGAGCTTAACTGCTTT...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGGAACCAAAAAGCACCTaGCAAGCCAGGCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQEPKST*QARQAH
Trigger: GTGGGCCTGCCTGGCTTGGCAGGTGCTTTTTGGTTC...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACATCTCAGGGCTTGGTaGTCATCCACCGTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGHLRAW*SSTVWP
Trigger: TGGCCACACGGTGGATGACCACCAAGCCCTGAGATG...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAAACCAACAGCCAACCTaGGGCTTCCACGGGTCATAC +
Preference number: 2 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTNQQPT*GFHGSY
Trigger: GTATGACCCGTGGAAGCCCCAGGTTGGCTGTTGGTT...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTCCCTTGGTGTGCCCTTaGGACTCCCAGAGATGTCTG +
Preference number: 2 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGPLVCP*DSQRCL
Trigger: CAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGG...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 90 bp ATATCTGAATACAACTGCTCAGTAAATACCTGTTCATCTCAGGGCTaGGTGGTCATCCACCGTGTGGCCACATTCCCCTCTGTGTGTCCT +
Preference number: 2 (lower is better)
Translates to: ISEYNCSVNTCSSQG*VVIHRVATFPSVCP
Trigger: AGGACACACAGAGGGGAATGTGGCCACACGGTGGATGACCACCAAGCCCTGAGATGAACAGGTATTTACTGAGCAGTTGTATTCAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGAAGCAGGCTCAGGTGTaGGGCATGCACCATTGTCCA +
Preference number: 2 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQKQAQV*GMHHCP
Trigger: TGGACAATGGTGCATGCCTCACACCTGAGCCTGCTT...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGATGGAGACTGCCTCTTaGCTCACCTCTCAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQMETAS*LTSQQP
Trigger: AGGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCAT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACATCCAGCGTGAGGTGCTaGCTAGTGAACCATGACATC +
Preference number: 2 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTSSVRC*LVNHDI
Trigger: GATGTCATGGTTCACTAGGCAGCACCTCACGCTGGA...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGTGCTACTTCTTTCCTTaGTTTAGCGCTTTAAAAATC +
Preference number: 2 (lower is better)
Translates to: GLCSGEKPIALLLPAALQCYFFP*FSALKI
Trigger: GATTTTTAAAGCGCTAAAGCAAGGAAAGAAGTAGCA...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGATTGGCTTGGCAACATaGTGGGCACGGCCCCTAAGA +
Preference number: 2 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQIGLAT*WARPLR
Trigger: TCTTAGGGGCCGTGCCCACCATGTTGCCAAGCCAAT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGTGTTTGCACTGCACGTaGATGGTGTCCGTGGACAGG +
Preference number: 2 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQCLHCT*MVSVDR
Trigger: CCTGTCCACGGACACCATCCACGTGCAGTGCAAACA...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCATGAAGCCGGGGTGTaGGAAACATTGGCCCTGCTA +
Preference number: 2 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQHEAGV*ETLALL
Trigger: TAGCAGGGCCAATGTTTCCCACACCCCGGCTTCATG...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGGGGGCGGGTCAGTTCTaGGGTTTGGACCATAAATAC +
Preference number: 2 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQGAGQF*GLDHKY
Trigger: GTATTTATGGTCCAAACCTCAGAACTGACCCGCCCC...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGGCACACTGGGGAGATaGCTAAGACGCCATCGATTT +
Preference number: 2 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGGTLGR*LRRHRF
Trigger: AAATCGATGGCGTCTTAGTCATCTCCCCAGTGTGCC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCACTCAGGTGTGAGGCATaGACCATTGTCCAATGTGGA +
Preference number: 2 (lower is better)
Translates to: NTTLLRADYSTVNGSKTALRCEA*TIVQCG
Trigger: TCCACATTGGACAATGGTGCATGCCTCACACCTGAG...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 90 bp TGGGACTGTGTAACTTATGTTGGGGGTATGCACCTCAAAAATGTTTaGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: WDCVTYVGGMHLKNV*VQGMLKLAMYYSRG
Trigger: GCCTCTGCTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGCATACCCCCAACATAAGTTACACAGTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGTTTCAAAGAACCGAATaGATGCACCAGAATTTCAGA +
Preference number: 2 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGFQRTE*MHQNFR
Trigger: TCTGAAATTCTGGTGCATTCATTCGGTTCTTTGAAA...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGCACCAGTTATTTTGTaGGAACCTGCTGCGAAGCGA +
Preference number: 2 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGAPVIL*EPAAKR
Trigger: TCGCTTCGCAGCAGGTTCTCACAAAATAACTGGTGC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCCCCAGATGGTTTTCTaGAGACTCTCCCATCCTATC +
Preference number: 2 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQPQMVF*RLSHPI
Trigger: GATAGGATGGGAGAGTCTGCAGAAAACCATCTGGGG...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGATCTTCTTCAAAGTGCTaGGGAAGTGGGGGTAAGGGA +
Preference number: 2 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGSSSKC*GSGGKG
Trigger: TCCCTTACCCCCACTTCCCCAGCACTTTGAAGAAGA...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAAGTATCAGAATCACCTaGGTTACACTCGGGACCTTC +
Preference number: 2 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTSIRIT*VTLGTF
Trigger: GAAGGTCCCGAGTGTAACCCAGGTGATTCTGATACT...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCTGAGAAGACAGGTGTaGAACCAAAAAGCACCTGCC +
Preference number: 2 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQLRRQV*NQKAPA
Trigger: GGCAGGTGCTTTTTGGTTCCACACCTGTCTTCTCAG...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGATTGTCAACCGTCCTTaGACATCTACTGCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQIVNRP*TSTAVW
Trigger: CCACACAGCAGTAGATGTGCAAGGACGGTTGACAAT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCACCATTGTCCAATGTaGAAATTCAGGGATCAGGAT +
Preference number: 2 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVHHCPM*KFRDQD
Trigger: ATCCTGATCCCTGAATTTCCACATTGGACAATGGTG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGTTTTTGGTTGGTTGTaGTTTCAGAACGTTGATAGC +
Preference number: 2 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRVFGWL*FQNVDS
Trigger: GCTATCAACGTTCTGAAACCACAACCAACCAAAAAC...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 90 bp TCTGCTAATATCACAAGAAAAACCAACACTCCAACAAAGTTTGACTaGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCTCTCGA +
Preference number: 2 (lower is better)
Translates to: SANITRKTNTPTKFD*VMMSVAPIRPNLSR
Trigger: TCGAGAGAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGGAGTGTTGGTTTTTCTTGTGATATTAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAAAGCACGGAGTCAAATaGGACCTGCATAAAAGTACT +
Preference number: 2 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAKHGVK*DLHKST
Trigger: AGTACTTTTATGCAGGTCTCATTTGACTCCGTGCTT...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAAGACCCCCAAATCCATaGAACACCTTTAGTCAAGAT +
Preference number: 2 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTRPPNP*NTFSQD
Trigger: ATCTTGACTAAAGGTGTTGCATGGATTTGGGGGTCT...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTAGAAAGGGAGATAGCTaGCTTCTCGACTTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGRKGDS*LLDLLC
Trigger: ACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCT...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGACAGCTATATTAAAGTaGATGAAGAGGGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVTAILK*MKRGER
Trigger: CCTTTCTCCCCTCTTCATCCACTTTAATATAGCTGT...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACATCCGTTGCTATAATATaGCTCTTCGAACTTGGTCAT +
Preference number: 2 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTSVAII*LFELGH
Trigger: ATGACCAAGTTCGAAGAGTCATATTATAGCAACGGA...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGACTGAGAAAGCTCAATaGGATGGGCATAGGAAATTC +
Preference number: 2 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQTEKAQ*DGHRKF
Trigger: GAATTTCCTATGCCCATCTCATTGAGCTTTCTCAGT...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGACATCTACTGCTGTGTaGTACAAAGCAGTTAAGCTC +
Preference number: 2 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQTSTAV*YKAVKL
Trigger: GAGCTTAACTGCTTTGTACCACACAGCAGTAGATGT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR TCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGCCTATAGCGGTCATCTaGTTGTTAAACATGATTCAT +
Preference number: 2 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQPIAVI*LLNMIH
Trigger: ATGAATCATGTTTAACAATCAGATGACCGCTATAGG...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR GCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAAGGGATCAGGATAGATaGATTAACTGTTGTTACACT +
Preference number: 2 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGRDQDR*INCCYT
Trigger: AGTGTAACAACAGTTAATGCATCTATCCTGATCCCT...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp CAGATGGCTGAGGACCTCGCCAGCGCCCGAGGGGCTTaGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGC +
Preference number: 3 (lower is better)
Translates to: QMAEDLASARGA*LARPSETGRGS
Trigger: GCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTGGCGAGGTCCTCAGCCATCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp GTGGCTACCGTCCGCGCTTGGCTCTCGAGGGGCAGATaGCTGAGGACCTCGCCAGCGCCCGAGGGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: VATVRAWLSRGR*LRTSPAPEGLG
Trigger: GCCAAGCCCCTCGGGCGCTGGCGAGGTCCTCAGCCATCTGCCCCTCGAGAGCCAAGCGCGGACGGTAGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp CGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTaGGCGGGGGAGCACTACTGGCCTTTCCTGCCCATC +
Preference number: 3 (lower is better)
Translates to: RPRGLARQTQRD*AGEHYWPFLPI
Trigger: GATGGGCAGGAAAGGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp TCGGGAGGGATGAACTGGGTGGCTACCGTCCGCGCTTaGCTCTCGAGGGGCAGATGGCTGAGGACCTCGCCA +
Preference number: 3 (lower is better)
Translates to: SGGMNWVATVRA*LSRGRWLRTSP
Trigger: TGGCGAGGTCCTCAGCCATCTGCCCCTCGAGAGCCAAGCGCGGACGGTAGCCACCCAGTTCATCCCTCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp CCCAAAGGGAAGGGGTGTATGTCGGGAGGGATGAACTaGGTGGCTACCGTCCGCGCTTGGCTCTCGAGGGGC +
Preference number: 3 (lower is better)
Translates to: PKGKGCMSGGMN*VATVRAWLSRG
Trigger: GCCCCTCGAGAGCCAAGCGCGGACGGTAGCCACCCAGTTCATCCCTCCCGACATACACCCCTTCCCTTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp CCTTCCCCAAAGGGAAGGGGTGTATGTCGGGAGGGATaGACTGGGTGGCTACCGTCCGCGCTTGGCTCTCGA +
Preference number: 3 (lower is better)
Translates to: PSPKGRGVCREG*TGWLPSALGSR
Trigger: TCGAGAGCCAAGCGCGGACGGTAGCCACCCAGTTCATCCCTCCCGACATACACCCCTTCCCTTTGGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp GTCCCAGCCAGTGCCAGGGGAGGAAGGAGATCCATCTaGTCTCCCTTGGTGTGCCCTTGGGACTCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: VPASARGGRRSI*SPLVCPWDSQR
Trigger: TCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCAGATGGATCTCCTTCCTCCCCTGGCACTGGCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp AACCTGGTTTCTGGGGAAAGCTATGCCAGCATCTCGTaGGGCTGGCCTGGGGTGCATCTGCCCTTCGACTCC +
Preference number: 3 (lower is better)
Translates to: NLVSGESYASIS*GWPGVHLPFDS
Trigger: GGAGTCGAAGGGCAGATGCACCCCAGGCCAGCCCCACGAGATGCTGGCATAGCTTTCCCCAGAAACCAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCCAGCGCCCGAGGGGCTaGGCTCGCCAGACCCAGCGA +
Preference number: 3 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLQRPRG*ARQTQR
Trigger: TCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGGGCTACCGTCCGCGCTaGGCTCTCGAGGGGCAGATG +
Preference number: 3 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGGYRPR*ALEGQM
Trigger: CATCTGCCCCTCGAGAGCCAAGCGCGGACGGTAGCC...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp CGGCAACCACACCGCCTAACTCTGGAAACGCCATTCTaGGGGGAGTGGGGACATCCAATGGAGACTGCCTCT +
Preference number: 3 (lower is better)
Translates to: RQPHRLTLETPF*GEWGHPMETAS
Trigger: AGAGGCAGTCTCCATTGGATGTCCCCACTCCCCGCAGAATGGCGTTTCCAGAGTTAGGCGGTGTGGTTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp TCCTTCAGCTCAGCATGCATTGGCTTGGCAACATGGTaGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SFSSACIGLATW*ARPLRTSHSSS
Trigger: GGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAAGCCAATGCATGCTGAGCTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp GGAAGGAGATCCATCTGGTCTCCCTTGGTGTGCCCTTaGGACTCCCAGAGATGTCTGCTTAGCACCCTGGGC +
Preference number: 3 (lower is better)
Translates to: GRRSIWSPLVCP*DSQRCLLSTLG
Trigger: GCCCAGGGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCAGATGGATCTCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp CTCCCTTGGTGTGCCCTTGGGACTCCCAGAGATGTCTaGTTAGCACCCTGGGCTGCAGGAGAAAATCTGTCC +
Preference number: 3 (lower is better)
Translates to: LPWCALGTPRDV*LAPWAAGENLS
Trigger: GGACAGATTTTCTCCTGCAGCCCAGGGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp AGGGGAGGAAGGAGATCCATCTGGTCTCCCTTGGTGTaGCCTTGGGACTCCCAGAGATGTCTGCTTAGCACC +
Preference number: 3 (lower is better)
Translates to: RGGRRSIWSPLV*PWDSQRCLLST
Trigger: GGTGCTAAGCAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCAGATGGATCTCCTTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp CGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTaGCCTTTCCTGCCCATCCTTTACCATTACTATTGT +
Preference number: 3 (lower is better)
Translates to: RQTQRDWAGEHY*PFLPILYHYYC
Trigger: ACAATAGTAATGGTAAAGGATGGGCAGGAAAGGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp CCTGTTCATCTCAGGGCTTGGTGGTCATCCACCGTGTaGCCACATTCCCCTCTGTGTGTCCTGATGAAGCCC +
Preference number: 3 (lower is better)
Translates to: PVHLRAWWSSTV*PHSPLCVLMKP
Trigger: GGGCTTCATCAGGACACACAGAGGGGAATGTGGCCACACGGTGGATGACCACCAAGCCCTGAGATGAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp CCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTaGGGTATCATCTCTTTCCACGCACACCATCGTCAC +
Preference number: 3 (lower is better)
Translates to: PKEAGGRTKRGR*GIISFHAHHRH
Trigger: GTGACGATGGTGTGCGTGGAAAGAGATGATACCCCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp TGCGGGGAGTGGGGACATCCAATGGAGACTGCCTCTTaGCTCACCTCTCAGCAGCCTATCTCCTACTGCAGA +
Preference number: 3 (lower is better)
Translates to: CGEWGHPMETAS*LTSQQPISYCR
Trigger: TCTGCAGTAGGAGATAGGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCATTGGATGTCCCCACTCCCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp GCACAACACTACAGCACCAGGCTCCGCACAGCACCATaGACAGAGCACCACTGGCTTTTCACAGCTTGGGTT +
Preference number: 3 (lower is better)
Translates to: AQHYSTRLRTAP*TEHHWLFTAWV
Trigger: AACCCAAGCTGTGAAAAGCCAGTGGTGCTCTGTGCATGGTGCTGTGCGGAGCCTGGTGCTGTAGTGTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp GCCATTCTGCGGGGAGTGGGGACATCCAATGGAGACTaGCTCTTGACTCACCTCTCAGCAGCCTATCTCCTA +
Preference number: 3 (lower is better)
Translates to: AILRGVGTSNGD*LLTHLSAAYLL
Trigger: TAGGAGATAGGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCATTGGATGTCCCCACTCCCCGCAGAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp GGCAGGCCCACTCCCGATCACAGAAAGGGAGATAGCTaGCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGA +
Preference number: 3 (lower is better)
Translates to: GRPTPDHRKGDS*LLDLLCLATKG
Trigger: TCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGATCGGGAGTGGGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp AATTCCTTCAGCTCAGCATGCATTGGCTTGGCAACATaGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGC +
Preference number: 3 (lower is better)
Translates to: NSFSSACIGLAT*WARPLRTSHSS
Trigger: GCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAAGCCAATGCATGCTGAGCTGAAGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp TGGAAACGCCATTCTGCGGGGAGTGGGGACATCCAATaGAGACTGCCTCTTGACTCACCTCTCAGCAGCCTA +
Preference number: 3 (lower is better)
Translates to: WKRHSAGSGDIQ*RLPLDSPLSSL
Trigger: TAGGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCATTGGATGTCCCCACTCCCCGCAGAATGGCGTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp ACTCTCCCATCCTATCAGAGAGGACAGAAGCTGTCCTaGGGCTCCCTTCCCCAAAGGGAAGGGGTGTATGTC +
Preference number: 3 (lower is better)
Translates to: TLPSYQRGQKLS*GSLPQREGVYV
Trigger: GACATACACCCCTTCCCTTTGGGGAAGGGAGCCTCAGGACAGCTTCTGTCCTCTCTGATAGGATGGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp AAGCCTGAGAAGACAGGTGTGGAACCAAAAAGCACCTaGCAAGCCAGGCAGGCCCACTCCCGATCACAGAAA +
Preference number: 3 (lower is better)
Translates to: KPEKTGVEPKST*QARQAHSRSQK
Trigger: TTTCTGTGATCGGGAGTGGGCCTGCCTGGCTTGGCAGGTGCTTTTTGGTTCCACACCTGTCTTCTCAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp GGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTaGGGCTTCCACGGGTCATACAGACGGTCACATTCT +
Preference number: 3 (lower is better)
Translates to: GYTRDLPNQQPT*GFHGSYRRSHS
Trigger: AGAATGTGACCGTCTGTATGACCCGTGGAAGCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp GAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTaGACAGGGCACACTGGGGAGATGACTAAGACGCCA +
Preference number: 3 (lower is better)
Translates to: EPNVCTARGWCP*TGHTGEMTKTP
Trigger: TGGCGTCTTAGTCATCTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp GCCCTTTCTTTCACATCAAGCCTGAGAAGACAGGTGTaGAACCAAAAAGCACCTGCCAAGCCAGGCAGGCCC +
Preference number: 3 (lower is better)
Translates to: ALSFTSSLRRQV*NQKAPAKPGRP
Trigger: GGGCCTGCCTGGCTTGGCAGGTGCTTTTTGGTTCCACACCTGTCTTCTCAGGCTTGATGTGAAAGAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp GCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATaGTGTCCGTGGACAGGGCACACTGGGGAGATGACT +
Preference number: 3 (lower is better)
Translates to: AEKEPNVCTARG*CPWTGHTGEMT
Trigger: AGTCATCTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp CAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTaGATGGTGTCCGTGGACAGGGCACACTGGGGAGAT +
Preference number: 3 (lower is better)
Translates to: QSRKGTKCLHCT*MVSVDRAHWGD
Trigger: ATCTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp GTGAGAAGGCAAAGCAGTACCCATGAAGCCGGGGTGTaGGAAACATTGGCCCTGCTAAAAGCCAGACCCAAA +
Preference number: 3 (lower is better)
Translates to: VRRQSSTHEAGV*ETLALLKARPK
Trigger: TTTGGGTCTGGCTTTTAGCAGGGCCAATGTTTCCCACACCCCGGCTTCATGGGTACTGCTTTGCCTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp ACCAGGCTCCGCACAGCACCATGCACAGAGCACCACTaGCTTTTCACAGCTTGGGTTCAACTTCCTGTTTTT +
Preference number: 3 (lower is better)
Translates to: TRLRTAPCTEHH*LFTAWVQLPVF
Trigger: AAAAACAGGAAGTTGAACCCAAGCTGTGAAAAGCCAGTGGTGCTCTGTGCATGGTGCTGTGCGGAGCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp TGTTGTTACACTGGTCTGCTGAGCTCCTGTAGGATGTaGCCTGCCCAAGAGTCAAGAAAGTCCCAGCACAAC +
Preference number: 3 (lower is better)
Translates to: CCYTGLLSSCRM*PAQESRKSQHN
Trigger: GTTGTGCTGGGACTTTCTTGACTCTTGGGCAGGTCACATCCTACAGGAGCTCAGCAGACCAGTGTAACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp AGCGAGACTGGGCGGGGGAGCACTACTGGCCTTTCCTaGCCATCCTTTACCATTACTATTGTCGCTTTTAAA +
Preference number: 3 (lower is better)
Translates to: SETGRGSTTGLS*PSFTITIVAFK
Trigger: TTTAAAAGCGACAATAGTAATGGTAAAGGATGGGCAGGAAAGGCCAGTAGTGCTCCCCCGCCCAGTCTCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp AAATGCTCAGGACATCTTACAACGACCCTCCGCCAGTaGTTCCAAACAGATACAGTAAACACCCAGCAGGCC +
Preference number: 3 (lower is better)
Translates to: KCSGHLTTTLRQ*FQTDTVNTQQA
Trigger: GGCCTGCTGGGTGTTTACTGTATCTGTTTGGAAGCACTGGCGGAGGGTCGTTGTAAGATGTCCTGAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp ACAAAACAGAGCAGAAAAGGAACCAAATGTTTGCACTaGACGTGGATGGTGTCCGTGGACAGGGCACACTGG +
Preference number: 3 (lower is better)
Translates to: TKQSRKGTKCLH*TWMVSVDRAHW
Trigger: CCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTTCAGCATGCATTGGCTaGGCAACATGGTGGGCACGG +
Preference number: 3 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGSACIG*ATWWAR
Trigger: CCGTGCCCACCATGTTGCCAAGCCAATGCATGCTGA...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp GCTCCTTCCTTTAGTCCGAACATAAGGGGTTACCAATaGGAGGCAGAAGCAACGCTGGGTCAGAGAATGAAG +
Preference number: 3 (lower is better)
Translates to: APSFSPNIRGYQ*EAEATLGQRMK
Trigger: CTTCATTCTCTGACCCAGCGTTGCTTCTGCCTCTCATTGGTAACCCCTTATGTTCGGACTAAAGGAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGATGTTCATCTCAGGGCTaGGTGGTCATCCACCGTGTG +
Preference number: 3 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGCSSQG*VVIHRV
Trigger: CACACGGTGGATGACCACCAAGCCCTGAGATGAACA...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGAATGGAGACTGCCTCTaGACTCACCTCTCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQNGDCL*THLSAA
Trigger: GGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCATT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp GTATGCACCTCAAAAATGTTTTGGTCCAGGGTATGTTaGAGTTGGCCATGTACTACAGCAGAGGCAGCTGGC +
Preference number: 3 (lower is better)
Translates to: VCTSKMFWSRVC*SWPCTTAEAAG
Trigger: GCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp CCGATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTaGTTTGTTTGGCCACCAAGGGAAGAACAATACAAC +
Preference number: 3 (lower is better)
Translates to: PITEREIAAFST*FVWPPREEQYN
Trigger: GTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp CAGGAAGATTCACACATGCCAAGTATCAGAATCACCTaGGTTACACTCGGGACCTTCCAAACCAACAGCCAA +
Preference number: 3 (lower is better)
Translates to: QEDSHMPSIRIT*VTLGTFQTNSQ
Trigger: TTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGATACTTGGCATGTGTGAATCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp CAAGAGACTGGAGCCCACCTTGTTTTTGGTTGGTTGTaGTTTCAGAACGTTGATAGCACCTCAGCAAGACAG +
Preference number: 3 (lower is better)
Translates to: QETGAHLVFGWL*FQNVDSTSARQ
Trigger: CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAGGTGGGCTCCAGTCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTAGCTGCCTTCTCGACTaGCTTTGTTTGGCCACCAAG +
Preference number: 3 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGSCLLD*LCLATK
Trigger: CTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCT...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACATGGAGACTAGCAAGCTaGAAGCCATCTACTTCCAAC +
Preference number: 3 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTWRLAS*KPSTSN
Trigger: GTTGGAAGTAGATGGCTTCAAGCTTGCTAGTCTCCA...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGAGTCCTGATAAGCTCTaGGGTATTTATTTCAAAAGC +
Preference number: 3 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGSPDKL*GIYFKS
Trigger: GCTTTTGAAATAAATACCCAAGAGCTTATCAGGACT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp AAGGCACCCCCGCATCTACCTAAGCACGGAGTCAAATaGGACCTGCATAAAAGTACTGATGCGATAAGCAAA +
Preference number: 3 (lower is better)
Translates to: KAPPHLPKHGVK*DLHKSTDAISK
Trigger: TTTGCTTATCGCATCAGTACTTTTATGCAGGTCTCATTTGACTCCGTGCTTAGGTAGATGCGGGGGTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp AAAAGCCAAGAGACTGGAGCCCACCTTGTTTTTGGTTaGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCA +
Preference number: 3 (lower is better)
Translates to: KSQETGAHLVFG*LWFQNVDSTSA
Trigger: TGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAGGTGGGCTCCAGTCTCTTGGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCACTGGCTTTTCACAGCTaGGGTTCAACTTCCTGTTTT +
Preference number: 3 (lower is better)
Translates to: NTTLLRADYSTVNGSKTALAFHS*GSTSCF
Trigger: AAAACAGGAAGTTGAACCCAAGCTGTGAAAAGCCAG...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp GAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTaGCCACCAAGGGAAGAACAATACAACACAACACAA +
Preference number: 3 (lower is better)
Translates to: EREIAAFSTCFV*PPREEQYNTTQ
Trigger: TTGTGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR-3UTR CAA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGAGTTTTCCACCAGCTTaGCCTTGGTTTGAGATCTCA +
Preference number: 3 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQSFPPA*PWFEIS
Trigger: TGAGATCTCAAACCAAGGCAAAGCTGGTGGAAAACT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp ACCCGGAAGCTCAGGAACTTGCCTATAGCGGTCATCTaGTTGTTAAACATGATTCATGAAGACCCATATCTG +
Preference number: 3 (lower is better)
Translates to: TRKLRNLPIAVI*LLNMIHEDPYL
Trigger: CAGATATGGGTCTTCATGAATCATGTTTAACAATCAGATGACCGCTATAGGCAAGTTCCTGAGCTTCCGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp CATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATaGATTAACTGTTGTTACACTGGTCTGCTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: HCPMWKFRDQDR*INCCYTGLLSS
Trigger: GGAGCTCAGCAGACCAGTGTAACAACAGTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp CTTTCACTATTTACAGTTAAAACCAGACCACATAAATaGTCAGGACATCTTACAACGACCCTCCGCCAGTGC +
Preference number: 3 (lower is better)
Translates to: LSLFTVKTRPHK*SGHLTTTLRQC
Trigger: GCACTGGCGGAGGGTCGTTGTAAGATGTCCTGAGCATTTATGTGGTCTGGTTTTAACTGTAAATAGTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp TTTTTCAAGGTCAAGTATGTCATCAGACGGACAACCTaGAGGTATCAGACCCTCATGGAATCTACTTTACTG +
Preference number: 3 (lower is better)
Translates to: FFKVKYVIRRTT*RYQTLMESTLL
Trigger: CAGTAAAGTAGATTCCATGAGGGTCTGATACCTGCAGGTTGTCCGTCTGATGACATACTTGACCTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CCA 72 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTaGCTAATAAAACTAGGTTTTGAGGGAGTCATTTCA +
Preference number: 3 (lower is better)
Translates to: MLKLAMYYSRGS*LIKLGFEGVIS
Trigger: TGAAATGACTCCCTCAAAACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR GCA 72 bp AAATTAGGTTATCATCGACTCATTGTCAACCGTCCTTaGACATCTACTGCTGTGTGGTACAAAGCAGTTAAG +
Preference number: 3 (lower is better)
Translates to: KLGYHRLIVNRP*TSTAVWYKAVK
Trigger: CTTAACTGCTTTGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAACCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp ATGACTAAGACGCCATCGATTTCCGTTGCTATAATATaGCTCTTCGAACTTGGTCATGCTGTTAGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: MTKTPSISVAII*LFELGHAVRFF
Trigger: AAAGAACCTAACAGCATGACCAAGTTCGAAGAGTCATATTATAGCAACGGAAATCGATGGCGTCTTAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR TCA 72 bp TTAGTCAAGATTTCTGATGGTCAGATGATGATTTCTTaGGCTAGCACCAGTTATTTTGTGAGAACCTGCTGC +
Preference number: 3 (lower is better)
Translates to: LVKISDGQMMIS*ASTSYFVRTCC
Trigger: GCAGCAGGTTCTCACAAAATAACTGGTGCTAGCTCAAGAAATCATCATCTGACCATCAGAAATCTTGACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTGTGGGCACAGCCAGTaGCTGCCGGGTGGGGACGAC +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHCGHSQ*LPGGDD
Trigger: GTCGTCCCCACCCGGCAGGCACTGGCTGTGCCCACA...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTTGTGGTGGAGGTGCTaGTGCAGGGCGGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHLWWRC*CRAVWA
Trigger: GGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAA...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACCATGGGATCGGGGCTTaGGCGAGGCATGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHHGIGA*ARHGPG
Trigger: TCCTGGCCCATGCCTCGCCCAAGCCCCGATCCCATG...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACAGCATCTCGTGGGGCTaGCCTGGGGTGCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHSISWG*PGVHLP
Trigger: GGGCAGATGCACCCCAGGCCAGCCCCACGAGATGCT...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTCTTGCCAGCGTCTCTaGGCACAGGCTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHSCQRL*AQAQPG
Trigger: CCCAGGCTGAGCCTGTGCCCAGAGACGCTGGCAAGA...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACGGCTGTAGGGGCCAGTaGCCTTCGTGTAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHGCRGQ*PSCRHR
Trigger: CCTATGCCTACACGAAGGTCACTGGCCCCTACAGCC...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACGCCCTCTCCGCCAGCTaGTTCATCTTGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHALSAS*FILASQ
Trigger: CTGGGAAGCCAAGATGAAGCAGCTGGCGGAGAGGGC...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTCCCAGTCGGGCTTTTaGTCTACCCGCCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHSQSGF*STRQGP
Trigger: GGGTCCTTGGCGGGTAGACCAAAAGCCCGACTGGGA...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCTGCTGCAGGGCGGTCTaGGCCTTCTGGTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLACCRAV*AFWWVS
Trigger: CGACACCCACCAGAAGGCCCAGACCGCCCTGCAGCA...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCGGCACAGGCTCAGCCTaGGTCAGCGGGTCTACTGGC +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLAGTGSA*VSGSTG
Trigger: GCCAGTAGACCCGCTGACCCAGGCTGAGCCTGTGCC...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCCCAGTGCCTGCCGGGTaGGGACGACCCCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLAPVPAG*GRPPSS
Trigger: AGAAGAAGGGGGTCGTCCCCACCCGGCAGGCACTGG...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTGGCCCCAAAGGAACTaGGCTTGTCAGGGACGATGG +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHWPQRN*ACQGRW
Trigger: CCATCGTCCCTGACAAGCTCAGTTCCTTTGGGGCCA...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACGAGGGCTTCAGGCCTTaGTGGGACAATCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHEGFRP*WDNPPF
Trigger: GAAGGGTGGATTGTCCCAGCAAGGCCTGAAGCCCTC...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACCAGCATGCATTGGCTTaGCAACATGGTGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHQHALA*QHGGHG
Trigger: GCCGTGCCCACCATGTTGCCAAGCCAATGCATGCTG...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGGGCACAGCCAGTGCCTaGCGGGTGGGGACGACCCCC +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVGTASA*RVGTTP
Trigger: GGGGGTCGTCCCCACCCGGCAGGCACTGGCTGTGCC...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACAGTTTGCAGATCTGGTaGGTGCGGCGGTTGGTACAG +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHSLQIW*VRRLVQ
Trigger: CTGTACCAACCGCCGCACGCACCAGATCTGCAAACT...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACCTGGGCCATCGCAGTTaGAGTTGGGTGGTTTCATAC +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHLGHRS*SWVVSY
Trigger: GTATGAAACCACCCAACTGCAACTGCGATGGCCCAG...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCGCGCTGCCCAACAACTaGTCCAGTTCAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLAALPNN*SSSAMG
Trigger: TCCCATGGCTGAACTGGAGCAGTTGTTGGGCAGCGC...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACGGTGATGATGAGTGTTaGTCCCATCAGGCCCAACCT +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHGDDEC*SHQAQP
Trigger: AGGTTGGGCCTGATGGGAGCAACACTCATCATCACC...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGGCCGGGCACACTCGATaGGGATGGAGCCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVAGHTR*GWSRGL
Trigger: CAGCCCACGGCTCCATCCTCATCGAGTGTGCCCGGC...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCAAGCAGGCTCAGGTGTaGGGCATGCACCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLAKQAQV*GMHHCP
Trigger: TGGACAATGGTGCATGCCTCACACCTGAGCCTGCTT...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCGCAGTTGCAGTTGGGTaGTTTCATACCATGCCGCGC +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLAAVAVG*FHTMPR
Trigger: GCGCGGCATGGTATGAAACCACCCAACTGCAACTGC...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGATGAGGATGGAGCCGTaGGCTGGGGCCACGGCCACG +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVMRMEP*AGATAT
Trigger: CGTGGCCGTGGCCCCAGCCCACGGCTCCATCCTCAT...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACGGAGCAAAAGATGAGTaGTCTTCAGGAGGAACCACA +
Preference number: 4 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHGAKDE*SSGGTT
Trigger: TGTGGTTCCTCCTGAAGAGCACTCATCTTTTGCTCC...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCAGGGGAAGACGGGGTTaGTGGATGGAAAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLARGRRG*WMESHS
Trigger: ACTATGGCTTTCCATCCAGCAACCCCGTCTTCCCCT...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGGCAGCCCTCAGGCCCTaGCCGGGGTCCCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQAALRP*PGSPAV
Trigger: AACAGCAGGGGACCCCGGCCAGGGCCTGAGGGCTGC...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCCCTTCTCGATCCGGATaGCTTTCCCCTTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLAPSRSG*LSPSLH
Trigger: ATGGAGAGAAGGGGAAAGCCATCCGGATCGAGAAGG...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGGCTGGCGGCAGGACTTaGCAGGCTCGGGCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQAGGRT*QARAGV
Trigger: GACGCCTGCCCGAGCCTGCCAAGTCCTGCCGCCAGC...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACGCTGGTGGTGAGGAGTaGGGTGGTGGGCGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNAGGEE*GGGRLW
Trigger: CCACAGACGCCCACCACCCCACTCCTCACCACCAGC...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGCAGACCCAGCGAGACTaGGCGGGGGAGCACTACTGG +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVQTQRD*AGEHYW
Trigger: CCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTG...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCCATACTTGCAGCCGTTaGAGTACATGCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLAHTCSR*STCSRN
Trigger: GTTCCTGGAGCATGTACTTCAACGGCTGCAAGTATG...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACTGGGAAGAGGGGCTGTaGTTCCCGGGGCCTGGACTT +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNWEEGL*FPGPGL
Trigger: AAGTCCAGGCCCCGGGAAGCACAGCCCCTCTTCCCA...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGGGGCTCAGGCTGTTGTaGAGAGCGTGGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVGLRLL*RAWRSG
Trigger: GCCAGACCTCCACGCTCTGCACAACAGCCTGAGCCC...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCTCCTTCAGCTCAGCATaGATTGGCTTGGCAACATGG +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLASFSSA*IGLATW
Trigger: CCATGTTGCCAAGCCAATGCATGCTGAGCTGAAGGA...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGACAGCGTTCTGGCAGTaGTGGCCTGCCCGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGETAFWQ*WPARCR
Trigger: GCGGCACCGGGCAGGCCACCACTGCCAGAACGCTGT...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGGCTTCCAGCTGCCGCTaGCGGCAGGACTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEASSCR*RQDLAG
Trigger: GCCTGCCAAGTCCTGCCGCCAGCGGCAGCTGGAAGC...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGCCAGCGAGATGCGGGTaGGGTGGCAGCGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEPARCG*GGSGWA
Trigger: AGCCCAACCGCTGCCACCCCACCCGCATCTCGCTGG...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACCGTGGATGGTGTCCGTaGACAGGGCACACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNRGWCP*TGHTGE
Trigger: CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACG...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACACGGCCAGGGGCACCTaGAACTGGCTCATGATGCTG +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNTARGT*NWLMML
Trigger: CAGCATCATGAGCCAGTTTCAGGTGCCCCTGGCCGT...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGGGAGCTCCGGGGCGTTaGTGGAGGGGTGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWGAPGR*WRGVSA
Trigger: GGCACTGACACCCCTCCAGCAACGCCCCGGAGCTCC...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGTGGGAAGCTGCCTGCTaGCCCTCACCGGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEWEAAC*PSPGNS
Trigger: GCTGTTCCCCGGTGAGGGGCAGCAGGCAGCTTCCCA...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGGGGGAAGAGGGCCAGTaGAGCCTGGCTGCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQGEEGQ*SLAARL
Trigger: CAGCCTTGCAGCCAGGCTCCACTGGCCCTCTTCCCC...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGCTCTCGAGGGGCAGATaGCTGAGGACCTCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQLSRGR*LRTSPA
Trigger: CGCTGGCGAGGTCCTCAGCCATCTGCCCCTCGAGAG...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGCATAGGAGGACACGGTaGCCGCCGAGTCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQHRRTR*PPSLWA
Trigger: TGCCCACAGACTCGGCGGTCACCGTGTCCTCCTATG...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGCGGAGGGCCGGCAGTTaGCCAGCACCGAGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWRRAGS*PAPSSS
Trigger: AGAGCTACTCGGTGCTGGGCAACTGCCGGCCCTCCG...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACCTCCGCACAGCACCATaGACAGAGCACCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNLRTAP*TEHHWL
Trigger: AAGCCAGTGGTGCTCTGTGCATGGTGCTGTGCGGAG...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACTCACCCACTTTGCAATaGGGCAACCGCGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNSPTLQ*GNRGSS
Trigger: AGAGCTCCCGCGGTTGCCCCATTGCAAAGTGGGTGA...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGCCAGGGTCTGGACGCTaGAGAAGGCAGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQPGSGR*RRQCCL
Trigger: CAGGCAGCACTGCCTTCTCCAGCGTCCAGACCCTGG...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGAGCGCCCGAGGGGCTTaGCTCGCCAGACCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGSARGA*LARPSE
Trigger: CTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGTCGGGAGGGATGAACTaGGTGGCTACCGTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQSGGMN*VATVRA
Trigger: AGCGCGGACGGTAGCCACCCAGTTCATCCCTCCCGA...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGAGTCCATGCAGGCCGTaGCCCCCGCGAAGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGSPCRP*PPRRAV
Trigger: GACGGCCCTTCGCGGGGGTCACGGCCTGCATGGACT...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCTCTGCGGCTCCACCTTaGGGGAGGGCTTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGSAAPP*GRASGL
Trigger: AAGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCAGA...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGCTTTCAGGGCCGAGTTaGAATCCCCTGCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWLSGPS*NPLPPA
Trigger: CGCTGGGGGCAGGGGATTTCAACTCGGCCCTGAAAG...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGCAAAACTGCCACTGCTaGCACTGTGCCCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQQNCHC*HCAPRH
Trigger: GTGCCTGGGGGCACAGTGGCAGCAGTGGCAGTTTTG...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGTGCTGTTCCCAAACTTaGAGGGGCTCCACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVCCSQT*RGSTVC
Trigger: GCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCA...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGCAGCTGGCTGGCCCCTaGGGCTGGAATCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGQLAGP*GWNPAL
Trigger: GAGGGCAGGATTCCAGCCGCAGGGGCCAGCCAGCTG...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGAGAAGACCAGCGAGATaGGGGTGGGGTGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWRRPAR*GWGGSG
Trigger: ACCGCTGCCACCCCACCCGCATCTCGCTGGTCTTCT...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACGGGCAGCCTCCTCCTaGCGTGCCCGTGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSRAASS*RARALS
Trigger: GGAGAGGGCACGGGCACGGCAGGAGGAGGCTGCCCG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGCATGGTCCCAGCCAGTaGCAGGGGAGGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQHGPSQ*QGRKEI
Trigger: GATCTCCTTCCTCCCCTGGCACTGGCTGGGACCATG...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACCTATTGCTCTGCTCTTaGCTGCAGCTCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNLLLCS*LQLCRR
Trigger: CCTCCTGCAGAGCTGCAGGCAAGAGCAGAGCAATAG...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACAGGGGAGAAGCCTATTaGTCTGCTCTTGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNRGEAY*SALACS
Trigger: GCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCT...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGTGCCGTGAGTCCCCATaGTACACTGGCCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGECRESP*YTGPES
Trigger: GGACTCAGGGCCAGTGTACCATGGGGACTCACGGCA...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGGGGGAGCGACTTCGGTaGCCAGGTCCTGGAAACTCT +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEGERLR*PGPGNS
Trigger: AGAGTTTCCAGGACCTGGCCACCGAAGTCGCTCCCC...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACCCATTCTGCGGGGAGTaGGGACATCCAATGGAGACT +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNPFCGE*GHPMET
Trigger: AGTCTCCATTGGATGTCCCCACTCCCCGCAGAATGG...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGAGAGGGGCCGGTGGATaGGCCTGCACTTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGRGAGG*ACTSWE
Trigger: CTCCCAGGAAGTGCAGGCTCATCCACCGGCCCCTCT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGAGGTCCGGTCATCGTTaGGGCCGCATCTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGRSGHR*GRISGW
Trigger: CCAGCCGGAGATGCGGCCTCAACGATGACCGGACCT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGGGGGCGGGTCAGTTCTaGGGTTTGGACCATAAATAC +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVGAGQF*GLDHKY
Trigger: GTATTTATGGTCCAAACCTCAGAACTGACCCGCCCC...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCTGGAATCTACTTTACTaGAGTTGTCATGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLAWNLLY*SCHDVL
Trigger: CAGGACATCATGACAACTTCAGTAAAGTAGATTCCA...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCTGGAGAAGGCAGTGCTaGCTGCCCGCCGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLWRRQC*LPAASG
Trigger: CCCGGAGGCGGCGGGCAGGCAGCACTGCCTTCTCCA...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGCGCTGGAGAAGGCAGTaGTGCCTGCCCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRRWRRQ*CLPAAS
Trigger: GGAGGCGGCGGGCAGGCAGCACTGCCTTCTCCAGCG...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACTCCAGCGTGAGGTGCTaGCTAGTGAACCATGACATC +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNSSVRC*LVNHDI
Trigger: GATGTCATGGTTCACTAGGCAGCACCTCACGCTGGA...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACGTAGTCAGGGCATTCTaGGCCATCGCAGTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNVVRAF*AIAVAV
Trigger: AACTGCAACTGCGATGGCCCAGAATGCCCTGACTAC...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCGCTCCGAGGATGGCGTaGGAGCCTCCCTCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGAPRMA*EPPSEV
Trigger: TACTTCAGAGGGAGGCTCCCACGCCATCCTCGGAGC...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGGTGGGTTCTCAGCCTTaGTGGGTGTGGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWVGSQP*WVWPPV
Trigger: GACAGGAGGCCACACCCACCAAGGCTGAGAACCCAC...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAAGGGTGAAGGCAAGTaGCTTCAGTCTCGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVKGEGK*LQSRGW
Trigger: CCATCCACGAGACTGAAGCCACTTGCCTTCACCCTT...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGCGCAGTTTGCAGATCTaGTGCGTGCGGCGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGERSLQI*CVRRLV
Trigger: TACCAACCGCCGCACGCACCAGATCTGCAAACTGCG...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCGATCAAATGGAGAAATaGCACCAATTAGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLADQMEK*HQLGRK
Trigger: TTTCCTCCCTAATTGGTGCCATTTCTCCATTTGATC...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGCAAGGCTGTTTGGGCTaGGGGACAGACGTCGCATGC +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWQGCLG*GTDVAC
Trigger: GCATGCGACGTCTGTCCCCCAGCCCAAACAGCCTTG...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGCCCTTGGTGTGCCCTTaGGACTCCCAGAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQPLVCP*DSQRCL
Trigger: CAGACATCTCTGGGAGTCCCAAGGGCACACCAAGGG...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGATGGTACACTGGCCCTaGGTCCATCTGACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQMVHWP*VHLTWN
Trigger: GTTCCAGGTCAGATGGACTCAGGGCCAGTGTACCAT...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGTTCGGACACTGGGCTTaGTCCCAGGGGCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWFGHWA*SQGQLS
Trigger: AGAAAGCTGCCCCTGGGATCAAGCCCAGTGTCCGAA...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCATGGTGGCCTGCCCGGTaGCGCACCAGGCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSWWPAR*RTRQSS
Trigger: GCTACTCTGCCTGGTGCGGCACCGGGCAGGCCACCA...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCGTCGGGCTCCGAGGATaGCGTGGGAGCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLVGLRG*RGSLPL
Trigger: CAGAGGGAGGCTCCCACGCCATCCTCGGAGCCCGAC...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGCTTCTTCTCCTTGGGTaGTCTGTCTGGAAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQLLLLG*SVWKPW
Trigger: CCACGGCTTCCAGACAGACCACCCAAGGAGAAGAAG...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGAGGCAGAGGGGCCGGTaGATGAGCCTGCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGRQRGR*MSLHFL
Trigger: CAGGAAGTGCAGGCTCATCCACCGGCCCCTCTGCCT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACCAAACTCATCCGTGTTaGCCATCTTGTACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNQTHPC*PSCTGG
Trigger: TCCCCCTGTACAAGATGGCCAACACGGATGAGTTTG...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGCCTCCTCTCCTTTCATaGGGTTCCACAGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVPPLLS*GSTACL
Trigger: AAGACAAGCTGTGGAACCCCATGAAAGGAGAGGAGG...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGAGCCCGTGGTTGGGCTaGTTGAGGTTCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWSPWLG*LRFLCW
Trigger: CCAGCACAAGAACCTCAACCAGCCCAACCACGGGCT...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGCTGGGGCCCAGGATCTaGGGGAGGACACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGLGPRI*GRTPAA
Trigger: TGCTGCTGGTGTCCTCCCCCAGATCCTGGGCCCCAG...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGGTTCATCTCAGGGCTTaGTGGTCATCCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEVHLRA*WSSTVW
Trigger: CCACACGGTGGATGACCACCAAGCCCTGAGATGAAC...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGCATGAAGCCGGGGTGTaGGAAACATTGGCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQHEAGV*ETLALL
Trigger: TAGCAGGGCCAATGTTTCCCACACCCCGGCTTCATG...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGACCAAGAGGGGGCGGTaGGGTATCATCTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGETKRGR*GIISFH
Trigger: GTGGAAAGAGATGATACCCCACCGCCCCCTCTTGGT...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 72 bp CTGCGGGGAGTGGGGACATCCAATGGAGACTGCCTCTaGACTCACCTCTCAGCAGCCTATCTCCTACTGCAG +
Preference number: 4 (lower is better)
Translates to: LRGVGTSNGDCL*THLSAAYLLLQ
Trigger: CTGCAGTAGGAGATAGGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCATTGGATGTCCCCACTCCCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAGTGGGAGCCTCCCTCTaGAGTACAGGGGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSVGASL*STGDGA
Trigger: GGCCCCATCCCCTGTACTTCAGAGGGAGGCTCCCAC...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGCCTCAAACTGCCGGATaGGCTCTTCCAGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQPQTAG*ALPACH
Trigger: ATGACAAGCTGGAAGAGCTCATCCGGCAGTTTGAGG...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTCGCGGGGGAAGGCGGTaGGCACCTGGATGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGRGGRR*APGWLR
Trigger: GCGGAGCCATCCAGGTGCTCACCGCCTTCCCCCGCG...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCATGGAGACTGCCTCTTaGCTCACCTCTCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGMETAS*LTSQQP
Trigger: AGGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCAT...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACTGGTCCAGGGTATGTTaGAGTTGGCCATGTACTACA +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNWSRVC*SWPCTT
Trigger: TGTAGTACATGGCCAACTTCAACATACCCTGGACCA...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGGTGATGAGTTACCCCTaGATGACGGGTAGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVVMSYP*MTGSQN
Trigger: GTTTTGACTACCCGTCATTCAGGGGTAACTCATCAC...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCTGGTGGAGGTGCTGCTaGAGGGCGGTCTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLWWRCC*RAVWAF
Trigger: GAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCA...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGCCAGTGGAGCCTGGCTaGAAGGCTGTCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGPVEPG*KAVMGL
Trigger: CAGCCCCATGACAGCCTTGCAGCCAGGCTCCACTGG...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGGACTCAATCTTGATTTaGTTGGGGGAACGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVDSILI*LGERVA
Trigger: TGCTACCCGTTCCCCCAAGCAAATCAAGATTGAGTC...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCTTCTCCTCCAGCGTGTaGCTGCGGATCACCCACTTT +
Preference number: 4 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGFSSSV*LRITHF
Trigger: AAAGTGGGTGATCCGCAGGCACACGCTGGAGGAGAA...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACACTGGCAGTGGTGGCCTaGCCGGTGCCGCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTLAVVA*PVPHQA
Trigger: TGCCTGGTGCGGCACCGGGCAGGCCACCACTGCCAG...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGACTTGCGAGGTGTCTTaGTCCGAGCATACTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQTCEVS*SEHTCS
Trigger: GCTGCAAGTATGCTCGGAGCAAGACACCTCGCAAGT...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCTCCTGCCGTGCCCGTaGCCTCTCCGCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVLLPCP*PLRQLL
Trigger: AAGCAGCTGGCGGAGAGGGCACGGGCACGGCAGGAG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAAGCCTCCTCCTGCCGTaGCCGTGCCCTCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTSLLLP*PCPLRQ
Trigger: CTGGCGGAGAGGGCACGGGCACGGCAGGAGGAGGCT...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCTGCTACTTCTTTCCTTaGTTTAGCGCTTTAAAAATC +
Preference number: 4 (lower is better)
Translates to: EGLGSPDPARLGGGALLACYFFP*FSALKI
Trigger: GATTTTTAAAGCGCTAAAGCAAGGAAAGAAGTAGCA...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCTGCACTCGCACTCTGTaGACCTGGATGTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGCTRTL*TWMWDC
Trigger: ACAGTCCCACATCCAGGTGCACAGAGTGCGAGTGCA...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGCCCGCACTCGCGGAGTaGACTCGCACTCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRPALAE*TRTLCT
Trigger: GGTGCACAGAGTGCGAGTGCACTCCGCGAGTGCGGG...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAAGTATGAGCTGGGCCTaGGGCAGCCTCCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSSMSWA*GSLPVG
Trigger: CCCGACTGGGAGGCTGCCCCAGGCCCAGCTCATACT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGAGGCTGCGCTTGTGGTaGAGGTGCTGCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRRLRLW*RCCCRA
Trigger: CGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCT...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGCGCAAGAGAAGGTTCTaGGGGCAGGGGCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGRKRRF*GQGHSR
Trigger: TCTGCTGTGCCCCTGCCCCCAGAACCTTCTCTTGCG...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGCGCATCTCCGGCTGGTaGGGTTCCCATACTTCCGGA +
Preference number: 4 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGRISGW*GSHTSG
Trigger: TCCGGAAGTATGGGAACCCCACCAGCCGGAGATGCG...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGAGAGCGTACTTGGAGTaGAAGCCATTGACGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQRAYLE*KPLTEV
Trigger: GACCTCCGTCAATGGCTTCCACTCCAAGTACGCTCT...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGTCTGTGGGAACAGCCTaGCTGGGCAGCTCGGCAAAC +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGSVGTA*LGSSAN
Trigger: GTTTGCCGAGCTGCCCAGCCAGGCTGTTCCCACAGA...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGGGCTTGGCAACATGGTaGGCACGGCCCCTAAGAACC +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGGLATW*ARPLRT
Trigger: GGTTCTTAGGGGCCGTGCCCACCATGTTGCCAAGCC...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGGTTCCCAAAAGAGGCTaGTGGAAGGACCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWVPKRG*WKDQEG
Trigger: CCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAAC...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGCAGAGGAGAGCTGTGTaGGGGCCTCAATGGCAATGG +
Preference number: 4 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGQRRAV*GPQWQW
Trigger: CCATTGCCATTGAGGCCCTCACACAGCTCTCCTCTG...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGCAGGTACTTAAGAGGTaGCTCCAAGAAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEQVLKR*LQEATE
Trigger: CTCAGTGGCTTCTTGGAGTCACCTCTTAAGTACCTG...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGCCTTCCCCGTGTAGATaGCCTTCTCGATCCGGATGG +
Preference number: 4 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGPSPCR*PSRSGW
Trigger: CCATCCGGATCGAGAAGGTCATCTACACGGGGAAGG...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGGGACAGAAGCTGTCCTaGGGCTCCCTTCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGGQKLS*GSLPQR
Trigger: CCTTTGGGGAAGGGAGCCTCAGGACAGCTTCTGTCC...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGAAATCAGCATGGGCTTaGGCACGGCAACCACACCGC +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGKSAWA*ARQPHR
Trigger: GCGGTGTGGTTGCCGTGCTCAAGCCCATGCTGATTT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCTGGCCGGGGTCCCCTaGTGTTGTTCCCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVLAGVP*CCSQPH
Trigger: GTGAGGCTGGGAACAACAGCAGGGGACCCCGGCCAG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATGGCCTGGTGCTTGGTaGTGGGAGGCCGGCCTCACC +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAWPGAW*WEAGLT
Trigger: GGTGAGGCCGGCCTCCCAGCACCAAGCACCAGGCCA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGGGGAGAACATGCAGCTaGTCATCCTCGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWGRTCS*SSSGIL
Trigger: CAAGATTCCCGAGGATGAGCAGCTGCATGTTCTCCC...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGCCCTTCTTCTCTTTCTaGTGGGGCTCAGCAACCACA +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWPFFSF*WGSATT
Trigger: TGTGGTTGCTGAGCCCCAGCAGAAAGAGAAGAAGGG...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGCTCAGGTGTGAGGCATaGACCATTGTCCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGELRCEA*TIVQCG
Trigger: TCCACATTGGACAATGGTGCATGCCTCACACCTGAG...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGACGACCCTCCGCCAGTaGTTCCAAACAGATACAGTA +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQTTLRQ*FQTDTV
Trigger: TACTGTATCTGTTTGGAAGCACTGGCGGAGGGTCGT...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAGAGTGGCCTGGTGCTTaGTGCTGGGAGGCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTEWPGA*CWEAGL
Trigger: GAGGCCGGCCTCCCAGCACCAAGCACCAGGCCACTC...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGAGTTCTAGGAGTTGCTaGAGGGAAGGCAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGESSRSC*REGRAI
Trigger: GATAGCTCTGCCTTCCCTCCAGCAACTCCTAGAACT...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCGTCTGGGCCTTCTGGTaGGTGTCGGGCTCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLVWAFW*VSGSED
Trigger: ATCCTCGGAGCCCGACACCCACCAGAAGGCCCAGAC...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGCGGTCTGGGCCTTCTaGTGGGTGTCGGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTAVWAF*WVSGSE
Trigger: CTCGGAGCCCGACACCCACCAGAAGGCCCAGACCGC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGAAGAGGCTGCGCTTGTaGTGGAGGTGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGKRLRL*WRCCCR
Trigger: CCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTT...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGAGGGCCAGTGGAGCCTaGCTGCAAGGCTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRRASGA*LQGCHG
Trigger: CCCATGACAGCCTTGCAGCCAGGCTCCACTGGCCCT...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACGCGTTCTGGCAGTGGTaGCCTGCCCGGTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINAFWQW*PARCRT
Trigger: GGTGCGGCACCGGGCAGGCCACCACTGCCAGAACGC...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCACGATCACAGCGTTCTaGCAGTGGTGGCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLTITAF*QWWPAR
Trigger: CCGGGCAGGCCACCACTGCCAGAACGCTGTGATCGT...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGGGTCAGCGGGTCTACTaGCTCTTGCTTGATGGATCT +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWGQRVY*LLLDGS
Trigger: AGATCCATCAAGCAAGAGCCAGTAGACCCGCTGACC...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGAGCCGTCCTCCAGAGTaGGAAGCTGCCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVSRPPE*EAACCP
Trigger: GGGGCAGCAGGCAGCTTCCCACTCTGGAGGACGGCT...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGGAAGTCATAAAGGCCTaGCAGGTCCGGCTGGACGGC +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGEVIKA*QVRLDG
Trigger: GCCGTCCAGCCGGACCTGCCAGGCCTTTATGACTTC...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGAGTGGGGACATCCAATaGAGACTGCCTCTTGACTCA +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGESGDIQ*RLPLDS
Trigger: TGAGTCAAGAGGCAGTCTCCATTGGATGTCCCCACT...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGAAGCCGTGGGACAGGTaGACTTGGTGGGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVKPWDR*TWWGPP
Trigger: TGGTGGCCCCCACCAAGTTCACCTGTCCCACGGCTT...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGCATGCTTGGGCCTCCTaGGTACTGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGHAWAS*VLSPKV
Trigger: CACCTTTGGGGACAGTACTCAGGAGGCCCAAGCATG...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGACCCAGGCATGAGTTaGGCAGGTAGGGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRDPGMS*AGRGVV
Trigger: CACCACACCCCTACCTGCTCAACTCATGCCTGGGTC...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCGTATGTCGGGAGGGATaGACTGGGTGGCTACCGTCC +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLVCREG*TGWLPS
Trigger: GGACGGTAGCCACCCAGTTCATCCCTCCCGACATAC...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCGCTGGGTCAGAGAATaGAGCCCCTGCCCACCATGG +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVRWVRE*SPCPPW
Trigger: CCATGGTGGGCAGGGGCTTCATTCTCTGACCCAGCG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGTATTGTGACAGTGGATaGCACAAAATGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LATWWARPLRTSHSSSSVYCDSG*HKMELP
Trigger: AGGAAGCTCCATTTTGTGTCATCCACTGTCACAATA...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACCTGAGGCGCTTAGCTaGCGTGAGTCCCCATGGTAC +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSPEALS*RESPWY
Trigger: GTACCATGGGGACTCACGGCAGCTAAGCGCCTCAGG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAGGTGGTTTCATACCATaGCGCGCGAGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTGGFIP*RARARA
Trigger: GGCCCTGGCCCTCGCGCGGCATGGTATGAAACCACC...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGTGTAATCACTGGCGCTaGCCAACAACTGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWCNHWR*PTTAPV
Trigger: AACTGGAGCAGTTGTTGGGCAGCGCCAGTGATTACA...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCGGGGAGGAAGAGGGTaGCTCCACCTTGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVRGGRG*LHLDLG
Trigger: CCCAAGGTCAAGGTGGAGGCACCCTCTTCCTCCCCG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACTGCGAGGCGGAACTTaGGAGGTGTCTTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSLRGGT*EVSCSE
Trigger: CTCGGAGCAAGACACCTCGCAAGTTCCGCCTCGCAG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCTTTCTGGCTTCCAGCTaGCGCTGGCGGCAGGACTTG +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLFLASS*RWRQDL
Trigger: CAAGTCCTGCCGCCAGCGGCAGCTGGAAGCCAGAAA...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGAGCTCCAGGGCCTCCTaGTTGATCTTCTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGSSRAS*LIFSGV
Trigger: CACTCCGGAGAAGATCAAGCAGGAGGCCCTGGAGCT...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGGAGCTGAAGTGGTTCTaGGGCTCCACCTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGELKWF*GSTLRE
Trigger: CTCCCTCAAGGTGGAGCCGCAGAACCACTTCAGCTC...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGGCAGACCAAAGGACTaGCAGGCCCTGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVGRPKD*QALSSW
Trigger: CCAGCTGGACAGGGCCTGGCAGTCCTTTGGTCTGCC...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGCCTCTTCACCTCCTCTaGAGCAGTCTGATCGGACTC +
Preference number: 4 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGPLHLL*SSLIGL
Trigger: GAGTCCGATCAGACTGCTGCAGAGGAGGTGAAGAGG...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAGGCCTGGGGTGCATCTaGCCTTCGACTCCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTGLGCI*PSTPSR
Trigger: CCGGCTTGGAGTCGAAGGGCAGATGCACCCCAGGCC...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGATTGTCAACCGTCCTTaGACATCTACTGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQIVNRP*TSTAVW
Trigger: CCACACAGCAGTAGATGTGCAAGGACGGTTGACAAT...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACCCTGGTGCTTGGTGCTaGGAGGCCGGCCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINPGAWC*EAGLTR
Trigger: CCTGGTGAGGCCGGCCTCCCAGCACCAAGCACCAGG...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAGGGTGGGTGTGAGTaGGTTCTCAGCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPREGGCE*VLSLGG
Trigger: CCCACCAAGGCTGAGAACCCACTCACACCCACCCTC...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCGGCCTGGGCTCTCTTaGCAGGTGTGTCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVRPGLS*QVCPAD
Trigger: GTCTGCTGGACACACCTGCCAAGAGAGCCCAGGCCG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCCCCACCTTTGCATTCTaGTTCTCCTCGCTACCAAAC +
Preference number: 4 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGPTFAF*FSSLPN
Trigger: GTTTGGTAGCGAGGAGAACCAGAATGCAAAGGTGGG...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACGCTGGCCCCTGCGGCTaGAATCCTGCCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINAGPCG*NPALLS
Trigger: GGAGAGGAGGGCAGGATTCCAGCCGCAGGGGCCAGC...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTCCCTGTCCAGCTGGCTaGCCCCTGCGGCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGPCPAG*PLRLES
Trigger: GGATTCCAGCCGCAGGGGCCAGCCAGCTGGACAGGG...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCGAGATGCGGGTGGGGTaGCAGCGGTTGGGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLEMRVG*QRLGFL
Trigger: TAAGAAGCCCAACCGCTGCCACCCCACCCGCATCTC...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCAGAGGGCCAGCCCGTaGTTGGGCTGGTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVQRASP*LGWLRF
Trigger: GAACCTCAACCAGCCCAACCACGGGCTGGCCCTCTG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGATCATCTTGGCCCGGTaGGTTCTTCACCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGIILAR*VLHPHP
Trigger: TGGGTGAGGGTGAAGAACCCACCGGGCCAAGATGAT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCTCTTCTTCAAAGTGCTaGGGAAGTGGGGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGSSSKC*GSGGKG
Trigger: TCCCTTACCCCCACTTCCCCAGCACTTTGAAGAAGA...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCATATGCCAGCATCTCGTaGGGCTGGCCTGGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSYASIS*GWPGVH
Trigger: ATGCACCCCAGGCCAGCCCCACGAGATGCTGGCATA...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGTTCCAACCTGGTTTCTaGGGAAAGCTATGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEFQPGF*GKLCQH
Trigger: ATGCTGGCATAGCTTTCCCCAGAAACCAGGTTGGAA...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGATTGGCTTGGCAACATaGTGGGCACGGCCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGIGLAT*WARPLR
Trigger: TCTTAGGGGCCGTGCCCACCATGTTGCCAAGCCAAT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGAGTATCAGAATCACCTaGGTTACACTCGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGESIRIT*VTLGTF
Trigger: GAAGGTCCCGAGTGTAACCCAGGTGATTCTGATACT...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACACATCTACTGCTGTGTaGTACAAAGCAGTTAAGCTC +
Preference number: 4 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNTSTAV*YKAVKL
Trigger: GAGCTTAACTGCTTTGTACCACACAGCAGTAGATGT...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATCCGGAGGGTGTCGGTaGGCTCCTGGTAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTASGGCR*APGRGC
Trigger: ACACCCTCTACCAGGAGCTCACCGACACCCTCCGGA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCCTGGGTCCTCCATTCTaGGACACCTCGGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLLGPPF*DTSDRG
Trigger: ACCTCTGTCCGAGGTGTCTCAGAATGGAGGACCCAG...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACACCCTGGACCCAGGCATaGGTTGAGCAGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTPWTQA*VEQVGV
Trigger: CACCCCTACCTGCTCAACTCATGCCTGGGTCCAGGG...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGCCTGAAACTGGCTCATaGTGCTGCCAGAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRPETGS*CCQRWG
Trigger: ACCCCACCTCTGGCAGCATCATGAGCCAGTTTCAGG...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAGCAAAGCAGTACCCATaGAGCCGGGGTGTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSAKQYP*SRGVGN
Trigger: GTTTCCCACACCCCGGCTTCATGGGTACTGCTTTGC...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCAGGTGTTGGGGTCTTTaGCTTGGCAAGCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLRCWGL*LGKRRS
Trigger: GGACCTGCGCTTGCCAAGGCAAAGACCCCAACACCT...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGGGTGCAGACCACGGTaGACCCATTGTAGAGGTTAT +
Preference number: 4 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGGCRPR*THCRGY
Trigger: ATAACCTCTACAATGGGTGCACCGTGGTCTGCACCC...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGCTTCTTCTCGGCTGCTaGCTTTCTGGCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGLLLGC*LSGFQL
Trigger: CAGCTGGAAGCCAGAAAGGCAGCAGCCGAGAAGAAG...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACGGACAGAGGTGTCTTaGCCATCTTGCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSRTEVS*PSCQRL
Trigger: GAGACGCTGGCAAGATGGGCAAGACACCTCTGTCCG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACAGGGGCTCCACGGTTTaGCTCGCAGCCGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINRGSTV*LAAVLQ
Trigger: CTGGAGGACGGCTGCGAGGCAAACCGTGGAGCCCCT...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACGGGGCTGGCCTGGGGTaGATCTGCCCTTCGACTCCA +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINGAGLG*ICPSTP
Trigger: TGGAGTCGAAGGGCAGATGCACCCCAGGCCAGCCCC...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCGAACCAAAAAGCACCTaGCAAGCCAGGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLEPKST*QARQAH
Trigger: GTGGGCCTGCCTGGCTTGGCAGGTGCTTTTTGGTTC...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCTGGTCTCCCTTGGTGTaGCCTTGGGACTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLWSPLV*PWDSQR
Trigger: TCTCTGGGAGTCCCAAGGGCACACCAAGGGAGACCA...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACGCGAGCAGTATGAGCTaGGCCTGGGGCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINASSMS*AWGSLP
Trigger: TGGGAGGCTGCCCCAGGCCCAGCTCATACTGCTCGC...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGCTCCAGTTCAGCCATaGGATCGGGGCTTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTAPVQP*DRGLGE
Trigger: CTCGCCCAAGCCCCGATCCCATGGCTGAACTGGAGC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTCGACGCAATCGCAGGTaGGGAACTCGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGRRNRR*GTRPGL
Trigger: GAGCCCAGGCCGAGTTCCCCACCTGCGATTGCGTCG...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAGGCCGCATCTCCGGCTaGTGGGGTTCCCATACTTCC +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAGRISG*WGSHTS
Trigger: GGAAGTATGGGAACCCCACCAGCCGGAGATGCGGCC...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACAAGGCGGTGAGCACCTaGATGGCTCCGCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINKAVST*MAPLPT
Trigger: GGTGGGCAGCGGAGCCATCCAGGTGCTCACCGCCTT...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCTTCAGAGACAGGCCTaGGTCCGACGTAATGCCCGC +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVLQRQA*VRRNAR
Trigger: GCGGGCATTACGTCGGACCCAGGCCTGTCTCTGAAG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGCTGTTGTGCAGAGCGTaGAGGTCTGGCTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGLLCRA*RSGFFS
Trigger: TGAGAAGAAGCCAGACCTCCACGCTCTGCACAACAG...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGATCTGTTGTAGCAGTTaGAGCTCTGGGCAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGICCSS*SSGQRG
Trigger: CCCCCTTTGCCCAGAGCTCCAACTGCTACAACAGAT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGTGGCCATCTGTGAAGTaGGAAGGGGCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVWPSVK*EGARQL
Trigger: CAGCTGCCTGGCCCCTTCCCACTTCACAGATGGCCA...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGCTACCGTCCGCGCTTaGCTCTCGAGGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGATVRA*LSRGRW
Trigger: CCATCTGCCCCTCGAGAGCCAAGCGCGGACGGTAGC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGCTCGTGGGGCTGGCCTaGGGTGCATCTGCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQLVGLA*GASALR
Trigger: TCGAAGGGCAGATGCACCCCAGGCCAGCCCCACGAG...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAAGGAACCACAGGCCATaGGGGAGCCCGGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTRNHRP*GSPEVR
Trigger: TCTTACCTCCGGGCTCCCTCATGGCCTGTGGTTCCT...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGCCGAAGACTCAATCTTaGTTTGCTTGGGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGPKTQS*FAWGNG
Trigger: CCCGTTCCCCCAAGCAAATCAAGATTGAGTCTTCGG...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTTCCTCTGCAGCAGTCTaGTCGGACTCCGTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGSSAAV*SDSVGG
Trigger: GCCCCCTACGGAGTCCGATCAGACTGCTGCAGAGGA...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGAAGCACGGAGTCAAATaGGACCTGCATAAAAGTACT +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQKHGVK*DLHKST
Trigger: AGTACTTTTATGCAGGTCTCATTTGACTCCGTGCTT...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCACCAGTTATTTTGTaGGAACCTGCTGCGAAGCGA +
Preference number: 4 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGAPVIL*EPAAKR
Trigger: TCGCTTCGCAGCAGGTTCTCACAAAATAACTGGTGC...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGATAAGGGGTTACCAATaGGAGGCAGAAGCAACGCTG +
Preference number: 4 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGIRGYQ*EAEATL
Trigger: CAGCGTTGCTTCTGCCTCTCATTGGTAACCCCTTAT...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGCTCAGTGGCATCGAGTaGGCAAAGAAAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGLSGIE*AKKAPS
Trigger: GGAAGGAGCTTTCTTTGCTCACTCGATGCCACTGAG...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCGTTCTAGGAAGAGGCTaGGCTTGTGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLVLGRG*ACGGGA
Trigger: AGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAAC...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGCGGATCACCCACTTTaGAATGGGGCAACCGCGGGA +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTADHPL*NGATAG
Trigger: TCCCGCGGTTGCCCCATTGCAAAGTGGGTGATCCGC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGTTTGGGATTGTCCCCTaGGAGGCGGAACTTGCGAGG +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVFGIVP*EAELAR
Trigger: CCTCGCAAGTTCCGCCTCGCAGGGGACAATCCCAAA...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCCTGGATGGCTCCGCTaGCCACCTTTGCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVPGWLR*PPLHSG
Trigger: ACCAGAATGCAAAGGTGGGCAGCGGAGCCATCCAGG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACCGAGTTGAAATCCCCTaGCCCCAGCGCCCACGGCTT +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINRVEIP*PQRPRL
Trigger: AAGCCGTGGGCGCTGGGGGCAGGGGATTTCAACTCG...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCCACGGGACCTCCAGCTaGTGTTGGGAGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLHGTSS*CWELLL
Trigger: AAGAAGAAGCTCCCAACACCAGCTGGAGGTCCCGTG...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAAGCGATTGTCTTCCTTaGTCAGGGTGCAGACCACGG +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSSDCLP*SGCRPR
Trigger: CCGTGGTCTGCACCCTGACCAAGGAAGACAATCGCT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAATACTCCTTGGGGCCTaGGTACGCAGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTILLGA*VRRLLV
Trigger: CACCAGCAGCCTGCGTACCCAGGCCCCAAGGAGTAT...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCCAAACAGCTTCTCGCTaGATCCCAGGGGCAGACCAA +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLQTASR*IPGADQ
Trigger: TTGGTCTGCCCCTGGGATCCAGCGAGAAGCTGTTTG...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCCACCCCCTCGGAGTTaGGACTCACTCCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQPPPRS*DSLPAM
Trigger: CATGGCTGGGAGTGAGTCCCAACTCCGAGGGGGTGG...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACGGTACGCTGGCTCCCTaGCACCTAGATCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINGTLAP*HLDPAA
Trigger: AGCCGCTGGATCTAGGTGCCAGGGAGCCAGCGTACC...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAGCGGGGGAGCACTACTaGCCTTTCCTGCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTAGEHY*PFLPIL
Trigger: AAGGATGGGCAGGAAAGGCCAGTAGTGCTCCCCCGC...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCAACCAACAGCCAACCTaGGGCTTCCACGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLNQQPT*GFHGSY
Trigger: GTATGACCCGTGGAAGCCCCAGGTTGGCTGTTGGTT...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCGGAAGGAGATCCATCTaGTCTCCCTTGGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLGRRSI*SPLVCP
Trigger: AGGGCACACCAAGGGAGACCAGATGGATCTCCTTCC...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGAACTGGGCTGAGCTCTaGGCCTGTCTTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQNWAEL*ACLDSR
Trigger: GCGGCTGTCAAGACAGGCTCAGAGCTCAGCCCAGTT...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTCCAGGGCCTCCTGCTTaGTCTTCTCCGGAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGPGPPA*SSPECS
Trigger: TGAGCACTCCGGAGAAGATCAAGCAGGAGGCCCTGG...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCGTGGTTGGGCTGGTTaGGGTTCTTGTGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVRGWAG*GSCAGR
Trigger: TCTACCAGCACAAGAACCTCAACCAGCCCAACCACG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAAGGGCCAGGGCCGTCTaGAGTGTGTCAAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGRARAV*SVSRSS
Trigger: CGAAGACCTTGACACACTGCAGACGGCCCTGGCCCT...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGAATTCAGCCTCAAACTaGCGGATGAGCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGNSASN*RMSSSS
Trigger: GCTGGAAGAGCTCATCCGGCAGTTTGAGGCTGAATT...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACACCTCCAGCGTGTGCCTaGGGATCACCCACTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTPPACA*GSPTLQ
Trigger: TTGCAAAGTGGGTGATCCGCAGGCACACGCTGGAGG...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGCATCCTCGGGAATCTTaGCCACGCAGCGATTGTCTT +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRHPRES*PRSDCL
Trigger: AAGACAATCGCTGCGTGGGCAAGATTCCCGAGGATG...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGTCCGCTGCCCACCTTTaGATTCTGGTTCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVSAAHL*ILVLLA
Trigger: AGCGAGGAGAACCAGAATGCAAAGGTGGGCAGCGGA...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATCTCAAAACTGCCACTaGTGCCACTGTGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTASQNCH*CHCAPR
Trigger: CCTGGGGGCACAGTGGCAGCAGTGGCAGTTTTGAGA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACACAGCCAAGGCCGAGGTaGTGTTCCCAAACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTQPRPR*CSQTCR
Trigger: CCTGCAAGTTTGGGAACAGCACCTCGGCCTTGGCTG...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACACTGCGGCTGGAATCCTaGCCTCCTCTCCTTTCATGG +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTLRLES*PPLLSW
Trigger: CCATGAAAGGAGAGGAGGGCAGGATTCCAGCCGCAG...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGGCCATCGATTTCCGTTaGTATAATATGACTCTTCGA +
Preference number: 4 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEAIDFR*YNMTLR
Trigger: TCGAAGAGTCATATTATAGCAACGGAAATCGATGGC...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGCTGCCTTCTCGACTTaGTTTGTTTGGCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRAAFST*FVWPPR
Trigger: CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGC...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAAGGCTGTCATGGGGCTaGGGGACCTCATTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTARLSWG*GTSFPE
Trigger: CTCAGGAAATGAGGTCCCCCAGCCCCATGACAGCCT...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTGGTTCTCAGCCTTGGTaGGTGTGGCCTCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGGSQPW*VWPPVL
Trigger: GAGGACAGGAGGCCACACCCACCAAGGCTGAGAACC...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACATGGTCCTTGTGGGCGTaGGCACAGAAGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTWSLWA*AQKSMQ
Trigger: CTGCATGGACTTCTGTGCCCACGCCCACAAGGACCA...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTTGGGAACAGCCTGGCTaGGCAGCTCGGCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGWEQPG*AARQTQ
Trigger: CTGAGTTTGCCGAGCTGCCCAGCCAGGCTGTTCCCA...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGAAGCAGATACTCCTTaGGGCCTGGGTACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTEADTP*GLGTQA
Trigger: AGCCTGCGTACCCAGGCCCCAAGGAGTATCTGCTTC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGGGAACAGCCCCCACTaGCCATCTGTGAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTGNSPH*PSVKWE
Trigger: TTCCCACTTCACAGATGGCCAGTGGGGGCTGTTCCC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGTTTTCCTCCAGGGTCTaGACGCTGGAGAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVFSSRV*TLEKAV
Trigger: CACTGCCTTCTCCAGCGTCCAGACCCTGGAGGAAAA...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCGAAAAGGGATCATCTTaGCCCGGTGGGTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLEKGSS*PGGFFT
Trigger: GGTGAAGAACCCACCGGGCCAAGATGATCCCTTTTC...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGTGGGGTCATAGGTGCTaGGGCAGAACCACAGTCGTT +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVWGHRC*GRTTVV
Trigger: AACGACTGTGGTTCTGCCCCAGCACCTATGACCCCA...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACACATCTCAGGGCTTGGTaGTCATCCACCGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTHLRAW*SSTVWP
Trigger: TGGCCACACGGTGGATGACCACCAAGCCCTGAGATG...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTCCCAAAAGAGGCTGGTaGAAGGACCAAGAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGPKRGW*KDQEGA
Trigger: CGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGG...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 72 bp TACAACTGCTCAGTAAATACCTGTTCATCTCAGGGCTaGGTGGTCATCCACCGTGTGGCCACATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: YNCSVNTCSSQG*VVIHRVATFPS
Trigger: AGAGGGGAATGTGGCCACACGGTGGATGACCACCAAGCCCTGAGATGAACAGGTATTTACTGAGCAGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACTCATCTCACGGTTaGAGGTTTCATAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVDSSHG*RFHRAG
Trigger: CCCGGCTCTATGAAACCTTCAACCGTGAGATGAGTC...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGGGGCCTGGACTTCTTaGTCTGAATGGGCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTGAWTS*SEWAFG
Trigger: TCCGAAAGCCCATTCAGATCAAGAAGTCCAGGCCCC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAAAGAGTCTACAAGGGTaGAGGCAAGTGGCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSKSLQG*RQVASV
Trigger: GACTGAAGCCACTTGCCTTCACCCTTGTAGACTCTT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGAGCTCCTGTAGGATGTaGCCTGCCCAAGAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVSSCRM*PAQESR
Trigger: TCTTGACTCTTGGGCAGGTCACATCCTACAGGAGCT...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACACCATCGTCACCTTGGTaGGAAGGCAAAGCAGTACCC +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTPSSPW*EGKAVP
Trigger: GGGTACTGCTTTGCCTTCTCACCAAGGTGACGATGG...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGCTTTCACATCAAGCCTaGGAAGACAGGTGTGGAACC +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRLSHQA*EDRCGT
Trigger: GGTTCCACACCTGTCTTCTCAGGCTTGATGTGAAAG...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGTTACTGAAGTTGTCATaGTGTCCTGTTTTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: GLCSGEKPIALLLPAALQLLKLS*CPVFEV
Trigger: TACCTCAAAAACAGGACATCATGACAACTTCAGTAA...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTTGTCAAGGTCTTCGCTaGCAGCAGAGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGCQGLR*QQSSPQ
Trigger: CTGAGGGCTGCTCTGCTGGCAGCGAAGACCTTGACA...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGGGAAGGAGGTGTCGTaGACCTGTTCTAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTGKEVS*TCSRKR
Trigger: CCTCTTCCTAGAACAGGTGCACGACACCTCCTTCCC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACCTTCCTTGGTCAGGGTaGAGACCACGGTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINLPWSG*RPRCTH
Trigger: ATGGGTGCACCGTGGTCTGCACCCTGACCAAGGAAG...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCAGTCTCGTGGATGGATaGCTCTTCTCAACCCCTCTT +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLSLVDG*LFSTPL
Trigger: AAGAGGGGTTGAGAAGAGGCATCCATCCACGAGACT...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAACCACAGTCGTTTCCTaGCACCTCCAAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTTTVVS*HLQRPP
Trigger: TGGTGGCCTTTGGAGGTGGCAGGAAACGACTGTGGT...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGACTACTGGCCTTTCCTaGCCATCCTTTACCATTACT +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGTTGLS*PSFTIT
Trigger: AGTAATGGTAAAGGATGGGCAGGAAAGGCCAGTAGT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGCCCCAGATGGTTTTCTaGAGACTCTCCCATCCTATC +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRPQMVF*RLSHPI
Trigger: GATAGGATGGGAGAGTCTGCAGAAAACCATCTGGGG...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAAGCTCCAGCGTGAGGTaGTGCCTAGTGAACCATGAC +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTASSSVR*CLVNHD
Trigger: GTCATGGTTCACTAGGCAGCACCTCACGCTGGAGCT...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCTGGAAACGCCATTCTaGGGGGAGTGGGGACATCCA +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQLETPF*GEWGHP
Trigger: TGGATGTCCCCACTCCCCGCAGAATGGCGTTTCCAG...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGACCAAATGTTTGCACTaGACGTGGATGGTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRTKCLH*TWMVSV
Trigger: CACGGACACCATCCACGTGCAGTGCAAACATTTGGT...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGAAGGCCACCAGATCGTaGGCATCTTCCAGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQKATRS*ASSRRA
Trigger: TGCTCGCCTGGAAGATGCCCACGATCTGGTGGCCTT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAACTGGATGTAATCACTaGCGCTGCCCAACAACTGCT +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSTGCNH*RCPTTA
Trigger: AGCAGTTGTTGGGCAGCGCCAGTGATTACATCCAGT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAAATCTGTCGGACAGGTaGGAAGAGGGGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTNLSDR*EEGLCF
Trigger: GAAGCACAGCCCCTCTTCCCACCTGTCCGACAGATT...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGCTGCAAGGCTGTCATaGGGCTGGGGGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGAARLS*GWGTSF
Trigger: AAATGAGGTCCCCCAGCCCCATGACAGCCTTGCAGC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTTCGGTGGCCAGGTCCTaGAAACTCTTCCGGAGCACT +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGSVARS*KLFRST
Trigger: AGTGCTCCGGAAGAGTTTCCAGGACCTGGCCACCGA...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGTGGCTTCAGTCTCGTaGATGGATGCCTCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRVASVS*MDASSQ
Trigger: TTGAGAAGAGGCATCCATCCACGAGACTGAAGCCAC...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGGGCCTCAGGCCGCTTaGATACTGACTGGATGTAAT +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTGPQAA*ILTGCN
Trigger: ATTACATCCAGTCAGTATTCAAGCGGCCTGAGGCCC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCTGGACTTCTTGATCTaGATGGGCTTTCGGACACTG +
Preference number: 4 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVLDFLI*MGFRTL
Trigger: CAGTGTCCGAAAGCCCATTCAGATCAAGAAGTCCAG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACGGGGGCAGAGCTGAGTaGGCAGTTTCTCCTGGTATT +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINGGRAE*AVSPGI
Trigger: AATACCAGGAGAAACTGCTCACTCAGCTCTGCCCCC...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGCCTATAGCGGTCATCTaGTTGTTAAACATGATTCAT +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWPIAVI*LLNMIH
Trigger: ATGAATCATGTTTAACAATCAGATGACCGCTATAGG...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAGAAAGAGATACTGGTTaGGGCACGTCAGGGATATCA +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSERDTG*GTSGIS
Trigger: TGATATCCCTGACGTGCCTCAACCAGTATCTCTTTC...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGCAGAATAGAAGCCAATaGGGAAGTAGGCCAAATCGC +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRQNRSQ*GSRPNR
Trigger: GCGATTTGGCCTACTTCCTCATTGGCTTCTATTCTG...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAAGTACACGCTGTTCATaGTGTAAGGGTCGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGSTRCS*CKGRRA
Trigger: GGCCCTCCGACCCTTACAGCATGAACAGCGTGTACT...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGGGTCAGGCTGGGCTGTaGATAGTAGGAGTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQGQAGL*IVGVVG
Trigger: TCCTACCACTCCTACTATGCACAGCCCAGCCTGACC...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGTCCTCTTGGGGGACATaGTTGGGCCTCCTGAGTACT +
Preference number: 4 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQSSWGT*LGLLST
Trigger: AGTACTCAGGAGGCCCAAGCATGTCCCCCAAGAGGA...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTTTCTGGGGAAAGCTATaGCAGCATCTCGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGFWGKL*QHLVGL
Trigger: CAGCCCCACGAGATGCTGGCATAGCTTTCCCCAGAA...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGAGGGATCAGGATAGATaGATTAACTGTTGTTACACT +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWRDQDR*INCCYT
Trigger: AGTGTAACAACAGTTAATGCATCTATCCTGATCCCT...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGAAAAATCCCTTGCTCTaGAAACTACTGTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWKNPLL*KLLFPK
Trigger: TTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTT...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGACTCCCAGAGATGTCTaGTTAGCACCCTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQTPRDV*LAPWAA
Trigger: TGCAGCCCAGGGTGCTAAGCAGACATCTCTGGGAGT...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAAGAAGCCTATTGCTCTaGTCTTGCCTGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTRSLLL*SCLQLC
Trigger: GCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCT...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCTTGCATTTCTGTGCTaGGGTCTCTGCTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQLAFLC*GLCSGE
Trigger: CTCCCCTGAGCAGAGACCGCAGCACAGAAATGCAAG...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCCTCCCTCCTCTGAATaGAAGCAGGTGGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQPPSSE*KQVVES
Trigger: GCTCTCAACCACCTGCTTCCATTCAGAGGAGGGAGG...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACATGTCCAGCAGACTCTTaGTGGGTGTGTCCAGGTACT +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTCPADS*WVCPGT
Trigger: AGTACCTGGACACACCCACCAAGAGTCTGCTGGACA...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAAGGCACCACAGGTGTTaGGGTCTTTGCCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGRHHRC*GLCLGK
Trigger: CTTGCCAAGGCAAAGACCCCAACACCTGTGGTGCCT...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGGCTTCAGGCCTTGCTaGGACAATCCACCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGGFRPC*DNPPFR
Trigger: TCTGAAGGGTGGATTGTCCCAGCAAGGCCTGAAGCC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAAACCCAATGACAGCATaGAGGAAGCAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTNPMTA*RKQAQV
Trigger: CACCTGAGCCTGCTTCCTCCATGCTGTCATTGGGTT...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGTGGTCATCCACCGTGTaGCCACATTCCCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQWSSTV*PHSPLC
Trigger: ACACAGAGGGGAATGTGGCCACACGGTGGATGACCA...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAGTCTGCTTAGCACCCTaGGCTGCAGGAGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTVCLAP*AAGENL
Trigger: CAGATTTTCTCCTGCAGCCCAGGGTGCTAAGCAGAC...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 72 bp AGCCAAGAGACTGGAGCCCACCTTGTTTTTGGTTGGTaGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SQETGAHLVFGW*WFQNVDSTSAR
Trigger: TCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAGGTGGGCTCCAGTCTCTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 72 bp CCCGATCACAGAAAGGGAGATAGCTGCCTTCTCGACTaGCTTTGTTTGGCCACCAAGGGAAGAACAATACAA +
Preference number: 4 (lower is better)
Translates to: PDHRKGDSCLLD*LCLATKGRTIQ
Trigger: TTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGATCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 72 bp GGTATGCACCTCAAAAATGTTTTGGTCCAGGGTATGTaGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GMHLKNVLVQGM*KLAMYYSRGSW
Trigger: CCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGCATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGTCCGTTGCTATAATATaGCTCTTCGAACTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGSVAII*LFELGH
Trigger: ATGACCAAGTTCGAAGAGTCATATTATAGCAACGGA...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGGGCACACTGGGGAGATaGCTAAGACGCCATCGATTT +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQGTLGR*LRRHRF
Trigger: AAATCGATGGCGTCTTAGTCATCTCCCCAGTGTGCC...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACCTTCTTCTTCTCGGCTaGTGCCTTTCTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINLLLLG*CLSGFQ
Trigger: CTGGAAGCCAGAAAGGCAGCAGCCGAGAAGAAGAAG...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGGCTTCTTCTCAAAACTaGCACTGCTGCCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQASSQN*HCCHCA
Trigger: GGCACAGTGGCAGCAGTGGCAGTTTTGAGAAGAAGC...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGCACATTTTCGCAGTTTaGAGATCTGGTGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQHIFAV*RSGACG
Trigger: GCCGCACGCACCAGATCTGCAAACTGCGAAAATGTG...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGAGGAAGATTCACACATaGCAAGTATCAGAATCACCT +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGRKIHT*QVSESP
Trigger: AGGTGATTCTGATACTTGGCATGTGTGAATCTTCCT...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCAAGGAACCAAATGTTTaGACTGCACGTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLKEPNV*TARGWC
Trigger: ACACCATCCACGTGCAGTGCAAACATTTGGTTCCTT...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACATACAAGCACTTCCCTTaGACGCAACAGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTYKHFP*TQQAGK
Trigger: TTTCCCTGCCTGTTGCGTGCAAGGGAAGTGCTTGTA...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGGCTTTAAAAATCCCTTaGTCTGCAAACTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGALKIP*SANYCS
Trigger: GGAACAGTAGTTTGCAGAGCAAGGGATTTTTAAAGC...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGTCCTTGCACATCTACTaGTGTGTGGTACAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRSLHIY*CVVQSS
Trigger: ACTGCTTTGTACCACACAGCAGTAGATGTGCAAGGA...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCACATCGCAGTTGCAGTTaGGTGGTTTCATACCATGCC +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAHRSCS*VVSYHA
Trigger: GGCATGGTATGAAACCACCCAACTGCAACTGCGATG...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACACTGAATGGAAGCAGGTaGTTGAGAGCACAGTCACAG +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTLNGSR*LRAQSQ
Trigger: CTGTGACTGTGCTCTCAACCACCTGCTTCCATTCAG...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACCTTCAGTCTCGTGGATaGATGCCTCTTCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINLQSRG*MPLLNP
Trigger: GGGGTTGAGAAGAGGCATCCATCCACGAGACTGAAG...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAAAAAAGCCAAGAGACTaGAGCCCACCTTGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSKKPRD*SPPCFW
Trigger: CCAAAAACAAGGTGGGCTCCAGTCTCTTGGCTTTTT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAAAAAAGCAGCCTCAGTaGCATCGAGTGAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSKKQPQ*HRVSKE
Trigger: TTCTTTGCTCACTCGATGCCACTGAGGCTGCTTTTT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGCTGTGTAACTTATGTTaGGGGTATGCACCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGLCNLC*GYAPQK
Trigger: TTTTTGAGGTGCATACCCCCAACATAAGTTACACAG...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGTTTAGCTTGTCAAACTaGAGGTCAGAGGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGFSLSN*RSEVFL
Trigger: TAGGAAAACCTCTGACCTTCAGTTTGACAAGCTAAA...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGGCCAAATCGCTCGCTaGTTCTTAGGCAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTGQIAR*FLGKKQ
Trigger: TTGCTTTTTGCCTAAGAATCAGCGAGCGATTTGGCC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACATCAGACGGACAACCTaGAGGTATCAGACCCTCATG +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINIRRTT*RYQTLM
Trigger: CATGAGGGTCTGATACCTGCAGGTTGTCCGTCTGAT...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTTCTTCTTCTTCTCCTTaGGTGGTCTGTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGSSSSP*VVCLEA
Trigger: GGCTTCCAGACAGACCACCCAAGGAGAAGAAGAAGA...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACTGCACAGAGCACCACTaGCTTTTCACAGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINCTEHH*LFTAWV
Trigger: AACCCAAGCTGTGAAAAGCCAGTGGTGCTCTGTGCA...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACACCATTGTCCAATGTaGAAATTCAGGGATCAGGAT +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSHHCPM*KFRDQD
Trigger: ATCCTGATCCCTGAATTTCCACATTGGACAATGGTG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGAGAAGCAAGTCTGGCTaGGTTTCTCTCAATGAAATT +
Preference number: 4 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGRSKSG*VSLNEI
Trigger: AATTTCATTGAGAGAAACCCAGCCAGACTTGCTTCT...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACTGAGAAGACAGGTGTaGAACCAAAAAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGLRRQV*NQKAPA
Trigger: GGCAGGTGCTTTTTGGTTCCACACCTGTCTTCTCAG...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 72 bp GTTTGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTaGTATTGGTTTCTCCTTTCATCTAATGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: VWAGGQTSHAFS*YWFLLSSNGFP
Trigger: AGGAAAGCCATTAGATGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGATCAGGAGCAAAAGATaGGTGCTCTTCAGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQIRSKR*VLFRRN
Trigger: GTTCCTCCTGAAGAGCACTCATCTTTTGCTCCTGAT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTACATCCAATGGAGACTaGCTCTTGACTCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGTSNGD*LLTHLS
Trigger: TGAGAGGTGAGTCAAGAGGCAGTCTCCATTGGATGT...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCAACACAACACAACACTaGTCAGAGCAGATTATAGCA +
Preference number: 4 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLNTTQH*SEQIIA
Trigger: TGCTATAATCTGCTCTGAGCAGTGTTGTGTTGTGTT...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGTCGCTATTTCCTCGTTaGTCACCTGGTTCTGATAGG +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQSLFPR*SPGSDR
Trigger: CCTATCAGAACCAGGTGACCAACGAGGAAATAGCGA...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGGACGGGGTTGCTGGATaGAAAGCCATAGTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQDGVAG*KAIVAK
Trigger: TTTAGCTACTATGGCTTTCCATCCAGCAACCCCGTC...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 72 bp CACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTaGGCCATGTACTACAGCAGAGGCAGCTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: HLKNVLVQGMLK*AMYYSRGSWLI
Trigger: TATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCATTTCAAAGAACCGAATaGATGCACCAGAATTTCAGA +
Preference number: 4 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSFQRTE*MHQNFR
Trigger: TCTGAAATTCTGGTGCATTCATTCGGTTCTTTGAAA...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGGACAGCAACAATGACTaGGAAAGCTCAATGAGATGG +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQDSNND*ESSMRW
Trigger: CCATCTCATTGAGCTTTCTCAGTCATTGTTGCTGTC...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGAAAGGAAAGAGATACTaGTTGAGGCACGTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQKGKRY*LRHVRD
Trigger: ATCCCTGACGTGCCTCAACCAGTATCTCTTTCCTTT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAAGCCCACCTTGTTTTTaGTTGGTTGTGGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTSPPCF*LVVVSE
Trigger: TTCTGAAACCACAACCAACCAAAAACAAGGTGGGCT...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGATCGACTTGCTTTGTTTaGCCACCAAGGGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGSTCFV*PPREEQ
Trigger: TTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGA...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAGTGGATGACACAAAATaGAGCTTCCTGGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAVDDTK*SFLVSF
Trigger: AAAACTCACCAGGAAGCTCCATTTTGTGTCATCCAC...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACCTGTGCACCTGGATGTaGGACTGTGTAACTTATGTT +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINLCTWM*DCVTYV
Trigger: AACATAAGTTACACAGTCCCACATCCAGGTGCACAG...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGCGGAATATTCAAGTATaGTTGTTAAGTTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRRNIQV*LLSSPP
Trigger: TGGAGGTGAACTTAACAACCATACTTGAATATTCCG...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGCACTCCAACAAAGTTTaGCTTGGTGATGATGAGTGT +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQHSNKV*LGDDEC
Trigger: ACACTCATCATCACCAAGTCAAACTTTGTTGGAGTG...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACACTGAGAAAGCTCAATaGGATGGGCATAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINTEKAQ*DGHRKF
Trigger: GAATTTCCTATGCCCATCTCATTGAGCTTTCTCAGT...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTACCAGACCACATAAATaGTCAGGACATCTTACAACG +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGTRPHK*SGHLTT
Trigger: CGTTGTAAGATGTCCTGAGCATTTATGTGGTCTGGT...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGAGACCCCCAAATCCATaGAACACCTTTAGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQRPPNP*NTFSQD
Trigger: ATCTTGACTAAAGGTGTTGCATGGATTTGGGGGTCT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGTTTTCCACCAGCTTTaGCTTGGTTTGAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGVFHQL*LGLRSH
Trigger: ATGAGATCTCAAACCAAGGCAAAGCTGGTGGAAAAC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAACAGCTATATTAAAGTaGATGAAGAGGGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTTAILK*MKRGER
Trigger: CCTTTCTCCCCTCTTCATCCACTTTAATATAGCTGT...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGTTTTTGGTTGGTTGTaGTTTCAGAACGTTGATAGC +
Preference number: 4 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTVFGWL*FQNVDS
Trigger: GCTATCAACGTTCTGAAACCACAACCAACCAAAAAC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
3UTR CAA 72 bp GTAACTTATGTTGGGGGTATGCACCTCAAAAATGTTTaGGTCCAGGGTATGTTGAAGTTGGCCATGTACTAC +
Preference number: 4 (lower is better)
Translates to: VTYVGGMHLKNV*VQGMLKLAMYY
Trigger: GTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGCATACCCCCAACATAAGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR TCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATACAAAAAGCATCCCTaGTATCAGAATAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAYKKHP*YQNRSQ
Trigger: TTGGCTTCTATTCTGATATCAGGGATGCTTTTTGTA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGGAGTCAAATGAGACCTaGATAAAAGTACTGATGCGA +
Preference number: 4 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQESNET*IKVLMR
Trigger: TCGCATCAGTACTTTTATGCAGGTCTCATTTGACTC...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACTGCCATTATACGACCTaGCCTTGTTTCTTTAATTGG +
Preference number: 4 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINCHYTT*PCFFNW
Trigger: CCAATTAAAGAAACAAGGGCAGGTCGTATAATGGCA...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CCA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTTACAGCAGAGGCAGCTaGCTAATAAAACTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGYSRGS*LIKLGF
Trigger: AAAACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTA...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GCACCTCAAAAATGTTTTGGTCCAGGGTATGTTGAAGTTGGCCATGTACTACAGAAAGAACCGAATGAATaGACCAGAATTTCAGAACAG +
Preference number: 4 (lower is better)
Translates to: APQKCFGPGYVEVGHVLQKEPNE*TRISEQ
Trigger: CTGTTCTGAAATTCTGGTGCATTCATTCGGTTCTTT...CTGTAGTACATGGCCAACTTCAACATACCCTGGACCAAAACATTTTTGAGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATTTGTGAGAACCTGCTaGGAAGCGATTTTTATTTTA +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAFVRTC*EAIFIL
Trigger: TAAAATAAAAATCGCTTCGCAGCAGGTTCTCACAAA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATATTTTGTGAGAACCTaGTGCGAAGCGATTTTTATT +
Preference number: 4 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAYFVRT*CEAIFI
Trigger: AATAAAAATCGCTTCGCAGCAGGTTCTCACAAAATA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR GCA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACATCTAATGTATTAATATaGCATTATACGACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTSNVLI*HYTTCP
Trigger: AGGGCAGGTCGTATAATGGCATATTAATACATTAGA...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS GCA 90 bp GCCGCGCGAGGGCCAGGGCCGTCTGCAGTGTGTCAAGGTCTTCGCTaGCAGCAGAGCAGCCCTCAGGCCCTGGCCGGGGTCCCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: AARGPGPSAVCQGLR*QQSSPQALAGVPCC
Trigger: ACAGCAGGGGACCCCGGCCAGGGCCTGAGGGCTGCTCTGCTGGCAGCGAAGACCTTGACACACTGCAGACGGCCCTGGCCCTCGCGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp AGGAAGAGGCTGCGCTTGTGGTGGAGGTGCTGCTGCAGGGCGGTCTaGGCCTTCTGGTGGGTGTCGGGCTCCGAGGATGGCGTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: RKRLRLWWRCCCRAV*AFWWVSGSEDGVGA
Trigger: GGCTCCCACGCCATCCTCGGAGCCCGACACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp GGTGGTGAGGAGTGGGGTGGTGGGCGTCTGTGGGAACAGCCTGGCTaGGCAGCTCGGCAAACTCAGCACCACCGTAGGCCGGGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GGEEWGGGRLWEQPG*AARQTQHHRRPGSG
Trigger: GCCTGAGCCCGGCCTACGGTGGTGCTGAGTTTGCCGAGCTGCCCAGCCAGGCTGTTCCCACAGACGCCCACCACCCCACTCCTCACCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp GCGCCCACGGCTTCTCAGTCAGGCTGGGCCCAGCCAAGGCCGAGGTaGTGTTCCCAAACTTGCAGGGGCTCCACGGTTTGCCTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: APTASQSGWAQPRPR*CSQTCRGSTVCLAA
Trigger: GGCTGCGAGGCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCTCGGCCTTGGCTGGGCCCAGCCTGACTGAGAAGCCGTGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS TCA 90 bp ACTTGGCAGGCTCGGGCAGGCGTCGGACCTCGCGGGGGAAGGCGGTaGGCACCTGGATGGCTCCGCTGCCCACCTTTGCATTCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: TWQARAGVGPRGGRR*APGWLRCPPLHSGS
Trigger: AGAACCAGAATGCAAAGGTGGGCAGCGGAGCCATCCAGGTGCTCACCGCCTTCCCCCGCGAGGTCCGACGCCTGCCCGAGCCTGCCAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp CACGGTTTGCCTCGCAGCCGTCCTCCAGAGTGGGAAGCTGCCTGCTaGCCCTCACCGGGGAACAGCCCCCACTGGCCATCTGTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: HGLPRSRPPEWEAAC*PSPGNSPHWPSVKW
Trigger: CCACTTCACAGATGGCCAGTGGGGGCTGTTCCCCGGTGAGGGGCAGCAGGCAGCTTCCCACTCTGGAGGACGGCTGCGAGGCAAACCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp CAGTCAGGCTGGGCCCAGCCAAGGCCGAGGTGCTGTTCCCAAACTTaGAGGGGCTCCACGGTTTGCCTCGCAGCCGTCCTCCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: QSGWAQPRPRCCSQT*RGSTVCLAAVLQSG
Trigger: CCCACTCTGGAGGACGGCTGCGAGGCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCTCGGCCTTGGCTGGGCCCAGCCTGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp GGCATAGGAGGACACGGTGACCGCCGAGTCTGTGGGCACAGCCAGTaGCTGCCGGGTGGGGACGACCCCCTTCTTCTCTTTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GIGGHGDRRVCGHSQ*LPGGDDPLLLFLLG
Trigger: CCCCAGCAGAAAGAGAAGAAGGGGGTCGTCCCCACCCGGCAGGCACTGGCTGTGCCCACAGACTCGGCGGTCACCGTGTCCTCCTATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp CTCAGGGCACTCTGGGACAGGGGCAGGCCCTCTTGGGGAGAGATCTaGGGCACCTCTGAGCTGAGGAGTGGCCTGGTGCTTGGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LRALWDRGRPSWGEI*GTSELRSGLVLGAG
Trigger: CCCAGCACCAAGCACCAGGCCACTCCTCAGCTCAGAGGTGCCCCAGATCTCTCCCCAAGAGGGCCTGCCCCTGTCCCAGAGTGCCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS-3UTR CAA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCTTTCGGACACTGGGCTaGATCCCAGGGGCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: EGLGSPDPARLGGGALLAFRTLG*IPGAAF
Trigger: GAAAGCTGCCCCTGGGATCAAGCCCAGTGTCCGAAA...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS GCA 90 bp TCGTGCACCTGTTCTAGGAAGAGGCTGCGCTTGTGGTGGAGGTGCTaGTGCAGGGCGGTCTGGGCCTTCTGGTGGGTGTCGGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: SCTCSRKRLRLWWRC*CRAVWAFWWVSGSE
Trigger: CTCGGAGCCCGACACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGTGCACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 90 bp GTGTCGTGCACCTGTTCTAGGAAGAGGCTGCGCTTGTGGTGGAGGTaGTGCTGCAGGGCGGTCTGGGCCTTCTGGTGGGTGTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: VSCTCSRKRLRLWWR*CCRAVWAFWWVSGS
Trigger: GGAGCCCGACACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGTGCACGACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 90 bp CCAAGGCCGAGGTGCTGTTCCCAAACTTGCAGGGGCTCCACGGTTTaGCTCGCAGCCGTCCTCCAGAGTGGGAAGCTGCCTGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: PRPRCCSQTCRGSTV*LAAVLQSGKLPAAP
Trigger: AGGGGCAGCAGGCAGCTTCCCACTCTGGAGGACGGCTGCGAGGCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCTCGGCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp GGATGTAATCACTGGCGCTGCCCAACAACTGCTCCAGTTCAGCCATaGGATCGGGGCTTGGGCGAGGCATGGGCCAGGAGCTCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: GCNHWRCPTTAPVQP*DRGLGEAWARSSGA
Trigger: CGCCCCGGAGCTCCTGGCCCATGCCTCGCCCAAGCCCCGATCCCATGGCTGAACTGGAGCAGTTGTTGGGCAGCGCCAGTGATTACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS-3UTR CAA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACGGCTACCGTCCGCGCTaGGCTCTCGAGGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNGYRPR*ALEGQM
Trigger: CATCTGCCCCTCGAGAGCCAAGCGCGGACGGTAGCC...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 90 bp CGCATCTCCGGCTGGTGGGGTTCCCATACTTCCGGAGGGTGTCGGTaGGCTCCTGGTAGAGGGTGTCTCCGAGGCTACGGGGAATGCCCT +
Preference number: 5 (lower is better)
Translates to: RISGWWGSHTSGGCR*APGRGCLRGYGECP
Trigger: AGGGCATTCCCCGTAGCCTCGGAGACACCCTCTACCAGGAGCTCACCGACACCCTCCGGAAGTATGGGAACCCCACCAGCCGGAGATGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp CAGTTGGGTGGTTTCATACCATGCCGCGCGAGGGCCAGGGCCGTCTaGAGTGTGTCAAGGTCTTCGCTGCCAGCAGAGCAGCCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: QLGGFIPCRARARAV*SVSRSSLPAEQPSG
Trigger: GCCTGAGGGCTGCTCTGCTGGCAGCGAAGACCTTGACACACTGCAGACGGCCCTGGCCCTCGCGCGGCATGGTATGAAACCACCCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp CCTCCAGCCACTCGAGGTAGTCAGGGCATTCTGGGCCATCGCAGTTaGAGTTGGGTGGTTTCATACCATGCCGCGCGAGGGCCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: PPATRGSQGILGHRS*SWVVSYHAARGPGP
Trigger: CGGCCCTGGCCCTCGCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCCTGACTACCTCGAGTGGCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp TGCACCTGTTCTAGGAAGAGGCTGCGCTTGTGGTGGAGGTGCTGCTaGAGGGCGGTCTGGGCCTTCTGGTGGGTGTCGGGCTCCGAGGAT +
Preference number: 5 (lower is better)
Translates to: CTCSRKRLRLWWRCC*RAVWAFWWVSGSED
Trigger: ATCCTCGGAGCCCGACACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp CACCAGATCGTGGGCATCTTCCAGGCGAGCAGTATGAGCTGGGCCTaGGGCAGCCTCCCAGTCGGGCTTTTGGTCTACCCGCCAAGGACC +
Preference number: 5 (lower is better)
Translates to: HQIVGIFQASSMSWA*GSLPVGLLVYPPRT
Trigger: GGTCCTTGGCGGGTAGACCAAAAGCCCGACTGGGAGGCTGCCCCAGGCCCAGCTCATACTGCTCGCCTGGAAGATGCCCACGATCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp CAGTGTGTCAAGGTCTTCGCTGCCAGCAGAGCAGCCCTCAGGCCCTaGCCGGGGTCCCCTGCTGTTGTTCCCAGCCTCACGACTCATCTC +
Preference number: 5 (lower is better)
Translates to: QCVKVFAASRAALRP*PGSPAVVPSLTTHL
Trigger: GAGATGAGTCGTGAGGCTGGGAACAACAGCAGGGGACCCCGGCCAGGGCCTGAGGGCTGCTCTGCTGGCAGCGAAGACCTTGACACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp GGGAAGGAGGTGTCGTGCACCTGTTCTAGGAAGAGGCTGCGCTTGTaGTGGAGGTGCTGCTGCAGGGCGGTCTGGGCCTTCTGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GKEVSCTCSRKRLRL*WRCCCRAVWAFWWV
Trigger: CACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGTGCACGACACCTCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp GGCAGGCAGAGGGGCCGGTGGATGAGCCTGCACTTCCTGGGAGGCTaGGGACCTAAGCCCTTCCAGGACAATCTGTCGGACAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: GRQRGRWMSLHFLGG*GPKPFQDNLSDRWE
Trigger: TTCCCACCTGTCCGACAGATTGTCCTGGAAGGGCTTAGGTCCCCAGCCTCCCAGGAAGTGCAGGCTCATCCACCGGCCCCTCTGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp TTCGACCATCTCCACCCCCTCGGAGTTGGGACTCACTCCCAGCCATaGAGAGCCCAGACCCCGGGAAGCTCCCTACCATCACCTGGCGCT +
Preference number: 5 (lower is better)
Translates to: FDHLHPLGVGTHSQP*RAQTPGSSLPSPGA
Trigger: AGCGCCAGGTGATGGTAGGGAGCTTCCCGGGGTCTGGGCTCTCCATGGCTGGGAGTGAGTCCCAACTCCGAGGGGGTGGAGATGGTCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CAGCGCCCGAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACGTGAGGCATGCACCATaGTCCAATGTGGAAATTCAG +
Preference number: 5 (lower is better)
Translates to: QRPRGLARQTQRDWAGEHVRHAP*SNVEIQ
Trigger: CTGAATTTCCACATTGGACAATGGTGCATGCCTCAC...GTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS GCA 90 bp GTCTTGGAACCCAGGACTACCTTTCAGGGCCGAGTTGAAATCCCCTaGCCCCAGCGCCCACGGCTTCTCAGTCAGGCTGGGCCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: VLEPRTTFQGRVEIP*PQRPRLLSQAGPSQ
Trigger: TTGGCTGGGCCCAGCCTGACTGAGAAGCCGTGGGCGCTGGGGGCAGGGGATTTCAACTCGGCCCTGAAAGGTAGTCCTGGGTTCCAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp ACTGCCAGGCCCTGTCCAGCTGGCTGGCCCCTGCGGCTGGAATCCTaGCCTCCTCTCCTTTCATGGGGTTCCACAGCTTGTCTTGGAACC +
Preference number: 5 (lower is better)
Translates to: TARPCPAGWPLRLES*PPLLSWGSTACLGT
Trigger: GGTTCCAAGACAAGCTGTGGAACCCCATGAAAGGAGAGGAGGGCAGGATTCCAGCCGCAGGGGCCAGCCAGCTGGACAGGGCCTGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp GCCACTCGAGGTAGTCAGGGCATTCTGGGCCATCGCAGTTGCAGTTaGGTGGTTTCATACCATGCCGCGCGAGGGCCAGGGCCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: ATRGSQGILGHRSCS*VVSYHAARGPGPSA
Trigger: TGCAGACGGCCCTGGCCCTCGCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCCTGACTACCTCGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp AAGGAGGTGTCGTGCACCTGTTCTAGGAAGAGGCTGCGCTTGTGGTaGAGGTGCTGCTGCAGGGCGGTCTGGGCCTTCTGGTGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: KEVSCTCSRKRLRLW*RCCCRAVWAFWWVS
Trigger: CGACACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGTGCACGACACCTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp ACCACCGTAGGCCGGGCTCAGGCTGTTGTGCAGAGCGTGGAGGTCTaGCTTCTTCTCAAAACTGCCACTGCTGCCACTGTGCCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: TTVGRAQAVVQSVEV*LLLKTATAATVPPG
Trigger: GCCTGGGGGCACAGTGGCAGCAGTGGCAGTTTTGAGAAGAAGCCAGACCTCCACGCTCTGCACAACAGCCTGAGCCCGGCCTACGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp ACCAAAGGACTGCCAGGCCCTGTCCAGCTGGCTGGCCCCTGCGGCTaGAATCCTGCCCTCCTCTCCTTTCATGGGGTTCCACAGCTTGTC +
Preference number: 5 (lower is better)
Translates to: TKGLPGPVQLAGPCG*NPALLSFHGVPQLV
Trigger: GACAAGCTGTGGAACCCCATGAAAGGAGAGGAGGGCAGGATTCCAGCCGCAGGGGCCAGCCAGCTGGACAGGGCCTGGCAGTCCTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS-3UTR CAA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACTGCGGATCACCCACTTaGCAATGGGGCAACCGCGGG +
Preference number: 5 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNCGSPT*QWGNRG
Trigger: CCCGCGGTTGCCCCATTGCAAAGTGGGTGATCCGCA...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GAGGGGCTTGGCTCGCCAGACCCAGCGAGACTGGGCGGGGGAGCACTACTGGCCGGAAAGAGATACTGGTaGAGGCACGTCAGGGATATC +
Preference number: 5 (lower is better)
Translates to: EGLGSPDPARLGGGALLAGKRYW*RHVRDI
Trigger: GATATCCCTGACGTGCCTCAACCAGTATCTCTTTCC...GGCCAGTAGTGCTCCCCCGCCCAGTCTCGCTGGGTCTGGCGAGCCAAGCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS GCA 90 bp GGGCATTCTGGGCCATCGCAGTTGCAGTTGGGTGGTTTCATACCATaGCGCGCGAGGGCCAGGGCCGTCTGCAGTGTGTCAAGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: GHSGPSQLQLGGFIP*RARARAVCSVSRSS
Trigger: CGAAGACCTTGACACACTGCAGACGGCCCTGGCCCTCGCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp AAGGAGCAGGGAAGGAGGTGTCGTGCACCTGTTCTAGGAAGAGGCTaGGCTTGTGGTGGAGGTGCTGCTGCAGGGCGGTCTGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: KEQGRRCRAPVLGRG*ACGGGAAAGRSGPS
Trigger: AGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGTGCACGACACCTCCTTCCCTGCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 90 bp AGGAGTACACGCTGTTCATGCTGTAAGGGTCGGAGGGCCGGCAGTTaGCCAGCACCGAGTAGCTCTCCACCACCGCGTTGCCGCTGTACT +
Preference number: 5 (lower is better)
Translates to: RSTRCSCCKGRRAGS*PAPSSSPPPRCRCT
Trigger: AGTACAGCGGCAACGCGGTGGTGGAGAGCTACTCGGTGCTGGGCAACTGCCGGCCCTCCGACCCTTACAGCATGAACAGCGTGTACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp CTCGAGGTAGTCAGGGCATTCTGGGCCATCGCAGTTGCAGTTGGGTaGTTTCATACCATGCCGCGCGAGGGCCAGGGCCGTCTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: LEVVRAFWAIAVAVG*FHTMPREGQGRLQC
Trigger: ACACTGCAGACGGCCCTGGCCCTCGCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCCTGACTACCTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp GAGACACCTCGGACAGAGGTGTCTTGCCCATCTTGCCAGCGTCTCTaGGCACAGGCTCAGCCTGGGTCAGCGGGTCTACTGGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: ETPRTEVSCPSCQRL*AQAQPGSAGLLALA
Trigger: AGCAAGAGCCAGTAGACCCGCTGACCCAGGCTGAGCCTGTGCCCAGAGACGCTGGCAAGATGGGCAAGACACCTCTGTCCGAGGTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp CCACACCGTTTCCGTTTCTTTCGACCATCTCCACCCCCTCGGAGTTaGGACTCACTCCCAGCCATGGAGAGCCCAGACCCCGGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: PHRFRFFRPSPPPRS*DSLPAMESPDPGKL
Trigger: GAGCTTCCCGGGGTCTGGGCTCTCCATGGCTGGGAGTGAGTCCCAACTCCGAGGGGGTGGAGATGGTCGAAAGAAACGGAAACGGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACAGCTCTGAGCCTGTCTaGACAGCCGCTCCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNSSEPV*TAAPCP
Trigger: GGGACAAGGAGCGGCTGTCAAGACAGGCTCAGAGCT...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGCGGGGTCCCCTGCTGTaGTTCCCAGCCTCACGACTC +
Preference number: 5 (lower is better)
Translates to: PNVCTARGWCPWTGHTGERGPLL*FPASRL
Trigger: GAGTCGTGAGGCTGGGAACAACAGCAGGGGACCCCG...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGGGCTGGGAGACATGTTaGCTGGTTCTCGGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LATWWARPLRTSHSSSSVGWETC*LVLGVL
Trigger: CAGGACCCCGAGAACCAGCAAACATGTCTCCCAGCC...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 90 bp TCCACAGCTTGTCTTGGAACCCAGGACTACCTTTCAGGGCCGAGTTaGAATCCCCTGCCCCCAGCGCCCACGGCTTCTCAGTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: STACLGTQDYLSGPS*NPLPPAPTASQSGW
Trigger: CCAGCCTGACTGAGAAGCCGTGGGCGCTGGGGGCAGGGGATTTCAACTCGGCCCTGAAAGGTAGTCCTGGGTTCCAAGACAAGCTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp CAGCCAGGAGCAGAAGGCTCTGAAGGAGCAGGGAAGGAGGTGTCGTaGACCTGTTCTAGGAAGAGGCTGCGCTTGTGGTGGAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QPGAEGSEGAGKEVS*TCSRKRLRLWWRCC
Trigger: GCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGTGCACGACACCTCCTTCCCTGCTCCTTCAGAGCCTTCTGCTCCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 90 bp GCGGGGGAAGGCGGTGAGCACCTGGATGGCTCCGCTGCCCACCTTTaGATTCTGGTTCTCCTCGCTACCAAACTCATCCGTGTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: AGEGGEHLDGSAAHL*ILVLLATKLIRVGH
Trigger: ATGGCCAACACGGATGAGTTTGGTAGCGAGGAGAACCAGAATGCAAAGGTGGGCAGCGGAGCCATCCAGGTGCTCACCGCCTTCCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp CTGAAGTGGTTCTGCGGCTCCACCTTGAGGGAGGGCTTCAGGCCTTaGTGGGACAATCCACCCTTCAGAGACAGGCCTGGGTCCGACGTA +
Preference number: 5 (lower is better)
Translates to: LKWFCGSTLREGFRP*WDNPPFRDRPGSDV
Trigger: TACGTCGGACCCAGGCCTGTCTCTGAAGGGTGGATTGTCCCAGCAAGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCAGAACCACTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp GGCTGGGCTGTGCATAGTAGGAGTGGTAGGAGTACACGCTGTTCATaGTGTAAGGGTCGGAGGGCCGGCAGTTGCCCAGCACCGAGTAGC +
Preference number: 5 (lower is better)
Translates to: GWAVHSRSGRSTRCS*CKGRRAGSCPAPSS
Trigger: GCTACTCGGTGCTGGGCAACTGCCGGCCCTCCGACCCTTACAGCATGAACAGCGTGTACTCCTACCACTCCTACTATGCACAGCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp GTCCTCCATTCTGAGACACCTCGGACAGAGGTGTCTTGCCCATCTTaGCAGCGTCTCTGGGCACAGGCTCAGCCTGGGTCAGCGGGTCTA +
Preference number: 5 (lower is better)
Translates to: VLHSETPRTEVSCPS*QRLWAQAQPGSAGL
Trigger: TAGACCCGCTGACCCAGGCTGAGCCTGTGCCCAGAGACGCTGGCAAGATGGGCAAGACACCTCTGTCCGAGGTGTCTCAGAATGGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp GGTGACTGGGTCCTCCATTCTGAGACACCTCGGACAGAGGTGTCTTaGCCATCTTGCCAGCGTCTCTGGGCACAGGCTCAGCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: GDWVLHSETPRTEVS*PSCQRLWAQAQPGS
Trigger: TGACCCAGGCTGAGCCTGTGCCCAGAGACGCTGGCAAGATGGGCAAGACACCTCTGTCCGAGGTGTCTCAGAATGGAGGACCCAGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp CCCAGGGGCAGCTTTCTCCGTTCCCACGGGACCTCCAGCTGGTGTTaGGAGCTTCTTCTTCTTCTCCTTGGGTGGTCTGTCTGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: PRGSFLRSHGTSSWC*ELLLLLLGWSVWKP
Trigger: CGGCTTCCAGACAGACCACCCAAGGAGAAGAAGAAGAAGCTCCCAACACCAGCTGGAGGTCCCGTGGGAACGGAGAAAGCTGCCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp GCCAGCGTCTCTGGGCACAGGCTCAGCCTGGGTCAGCGGGTCTACTaGCTCTTGCTTGATGGATCTGTTGTAGCAGTTGGAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: ASVSGHRLSLGQRVY*LLLDGSVVAVGALG
Trigger: GCCCAGAGCTCCAACTGCTACAACAGATCCATCAAGCAAGAGCCAGTAGACCCGCTGACCCAGGCTGAGCCTGTGCCCAGAGACGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp CCCACAGCTTCTCCTCTGACTTCAGAGCCCCAAACAGCTTCTCGCTaGATCCCAGGGGCAGACCAAAGGACTGCCAGGCCCTGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PTASPLTSEPQTASR*IPGADQRTARPCPA
Trigger: AGCTGGACAGGGCCTGGCAGTCCTTTGGTCTGCCCCTGGGATCCAGCGAGAAGCTGTTTGGGGCTCTGAAGTCAGAGGAGAAGCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS-3UTR CAA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACTTGCCCACGCAGCGATaGTCTTCCTTGGTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNLPTQR*SSLVRV
Trigger: CACCCTGACCAAGGAAGACAATCGCTGCGTGGGCAA...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS GCA 90 bp TCCACCACCGCGTTGCCGCTGTACTTGAAGGAGCTGAAGTGGTTCTaGGGCTCCACCTTGAGGGAGGGCTTCAGGCCTTGCTGGGACAAT +
Preference number: 5 (lower is better)
Translates to: STTALPLYLKELKWF*GSTLREGFRPCWDN
Trigger: ATTGTCCCAGCAAGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCAGAACCACTTCAGCTCCTTCAAGTACAGCGGCAACGCGGTGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp TCAGGCTGTTGTGCAGAGCGTGGAGGTCTGGCTTCTTCTCAAAACTaGCACTGCTGCCACTGTGCCCCCAGGCACCAGGACCCAGGAACT +
Preference number: 5 (lower is better)
Translates to: SGCCAERGGLASSQN*HCCHCAPRHQDPGT
Trigger: AGTTCCTGGGTCCTGGTGCCTGGGGGCACAGTGGCAGCAGTGGCAGTTTTGAGAAGAAGCCAGACCTCCACGCTCTGCACAACAGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp AGTCTCGTGGATGGATGCCTCTTCTCAACCCCTCTTCACCTCCTCTaGAGCAGTCTGATCGGACTCCGTAGGGGGCCACTCTCCCACCTG +
Preference number: 5 (lower is better)
Translates to: SLVDGCLFSTPLHLL*SSLIGLRRGPLSHL
Trigger: CAGGTGGGAGAGTGGCCCCCTACGGAGTCCGATCAGACTGCTGCAGAGGAGGTGAAGAGGGGTTGAGAAGAGGCATCCATCCACGAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CCA 90 bp CCACGGGACCTCCAGCTGGTGTTGGGAGCTTCTTCTTCTTCTCCTTaGGTGGTCTGTCTGGAAGCCGTGGGACAGGTGAACTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PRDLQLVLGASSSSP*VVCLEAVGQVNLVG
Trigger: CCCCACCAAGTTCACCTGTCCCACGGCTTCCAGACAGACCACCCAAGGAGAAGAAGAAGAAGCTCCCAACACCAGCTGGAGGTCCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp AAGTGGTTCTGCGGCTCCACCTTGAGGGAGGGCTTCAGGCCTTGCTaGGACAATCCACCCTTCAGAGACAGGCCTGGGTCCGACGTAATG +
Preference number: 5 (lower is better)
Translates to: KWFCGSTLREGFRPC*DNPPFRDRPGSDVM
Trigger: CATTACGTCGGACCCAGGCCTGTCTCTGAAGGGTGGATTGTCCCAGCAAGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCAGAACCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS-3UTR CAA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGAGGAGCTCCGGGGCGTaGCTGGAGGGGTGTCAGTGC +
Preference number: 5 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGRSSGA*LEGCQC
Trigger: GCACTGACACCCCTCCAGCAACGCCCCGGAGCTCCT...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACAGCACTTCTTCCTCTTaGGGATTGTCCCCTGCGAGG +
Preference number: 5 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNSTSSS*GLSPAR
Trigger: CCTCGCAGGGGACAATCCCAAAGAGGAAGAAGTGCT...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCCGCTGGCGGCAGGACTaGGCAGGCTCGGGCAGGCGT +
Preference number: 5 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLRWRQD*AGSGRR
Trigger: ACGCCTGCCCGAGCCTGCCAAGTCCTGCCGCCAGCG...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGTCCAGGGCCTCCTGCTaGATCTTCTCCGGAGTGCTC +
Preference number: 5 (lower is better)
Translates to: PNVCTARGWCPWTGHTGESRASC*IFSGVL
Trigger: GAGCACTCCGGAGAAGATCAAGCAGGAGGCCCTGGA...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCTTCTGCGGCTCCACCTaGAGGGAGGGCTTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGFCGST*REGFRP
Trigger: AGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCAGAA...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGTTGGAGTGGAAGCCATaGACGGAGGTCAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GLCSGEKPIALLLPAALQLEWKP*TEVRLG
Trigger: GCCCAGCCTGACCTCCGTCAATGGCTTCCACTCCAA...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGGTGCTGCCTAGTGAACAATGGAGACTGCCTCTaGACTCACCTCTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: RPLRTSHSSSSVRCCLVNNGDCL*THLSAA
Trigger: GGCTGCTGAGAGGTGAGTCAAGAGGCAGTCTCCATT...GTTCACTAGGCAGCACCTCACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGGGGGTGTGGGAAACATaGGCCCTGCTAAAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: LATWWARPLRTSHSSSSVGVWET*ALLKAR
Trigger: TCTGGCTTTTAGCAGGGCCAATGTTTCCCACACCCC...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 90 bp CTTAGCTGCCGTGAGTCCCCATGGTACACTGGCCCTGAGTCCATCTaGCCTGGAACAGGTCCATCAACTGGGCTGAGCTCTGAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: LSCRESPWYTGPESI*PGTGPSTGLSSEPV
Trigger: GACAGGCTCAGAGCTCAGCCCAGTTGATGGACCTGTTCCAGGTCAGATGGACTCAGGGCCAGTGTACCATGGGGACTCACGGCAGCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp AAGCCCTTCCAGGACAATCTGTCGGACAGGTGGGAAGAGGGGCTGTaGTTCCCGGGGCCTGGACTTCTTGATCTGAATGGGCTTTCGGAC +
Preference number: 5 (lower is better)
Translates to: KPFQDNLSDRWEEGL*FPGPGLLDLNGLSD
Trigger: GTCCGAAAGCCCATTCAGATCAAGAAGTCCAGGCCCCGGGAAGCACAGCCCCTCTTCCCACCTGTCCGACAGATTGTCCTGGAAGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 90 bp CAGAGGTGGGGTCATAGGTGCTGGGGCAGAACCACAGTCGTTTCCTaGCACCTCCAAAGGCCACCAACAGGTCCTTCTCGCCTAGAACAG +
Preference number: 5 (lower is better)
Translates to: QRWGHRCWGRTTVVS*HLQRPPTGPSRLEQ
Trigger: CTGTTCTAGGCGAGAAGGACCTGTTGGTGGCCTTTGGAGGTGGCAGGAAACGACTGTGGTTCTGCCCCAGCACCTATGACCCCACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CCA 90 bp CTTGATCCCAGGGGCAGCTTTCTCCGTTCCCACGGGACCTCCAGCTaGTGTTGGGAGCTTCTTCTTCTTCTCCTTGGGTGGTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: LDPRGSFLRSHGTSS*CWELLLLLLGWSVW
Trigger: CCAGACAGACCACCCAAGGAGAAGAAGAAGAAGCTCCCAACACCAGCTGGAGGTCCCGTGGGAACGGAGAAAGCTGCCCCTGGGATCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp TTCTCAGCCTTGGTGGGTGTGGCCTCCTGTCCTCCCTCCTCTGAATaGAAGCAGGTGGTTGAGAGCACAGTCACAGCCCCCGAAGACTCA +
Preference number: 5 (lower is better)
Translates to: FSALVGVASCPPSSE*KQVVESTVTAPEDS
Trigger: TGAGTCTTCGGGGGCTGTGACTGTGCTCTCAACCACCTGCTTCCATTCAGAGGAGGGAGGACAGGAGGCCACACCCACCAAGGCTGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp TGGGGGACATGCTTGGGCCTCCTGAGTACTGTCCCCAAAGGTGACTaGGTCCTCCATTCTGAGACACCTCGGACAGAGGTGTCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: WGTCLGLLSTVPKGD*VLHSETPRTEVSCP
Trigger: TGGGCAAGACACCTCTGTCCGAGGTGTCTCAGAATGGAGGACCCAGTCACCTTTGGGGACAGTACTCAGGAGGCCCAAGCATGTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS-3UTR CAA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGGGCTCTCTAGCACCATaGACCGGCACCCCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGGSLAP*TGTPEA
Trigger: CGCCTCAGGGGTGCCGGTCAATGGTGCTAGAGAGCC...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGGAGTGGCCTGGTGCTaGGTGCTGGGAGGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRGVAWC*VLGGRP
Trigger: AGGCCGGCCTCCCAGCACCAAGCACCAGGCCACTCC...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGGGAGGGCTTCAGGCCTaGCTGGGACAATCCACCCTT +
Preference number: 5 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWGGLQA*LGQSTL
Trigger: AAGGGTGGATTGTCCCAGCAAGGCCTGAAGCCCTCC...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 90 bp CGGGAAGCCCAAAGCTATCTCCAAATTCAGCCTCAAACTGCCGGATaGGCTCTTCCAGCTTGTCATCGGCAGGGGGAAGAGGGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: REAQSYLQIQPQTAG*ALPACHRQGEEGQW
Trigger: CCACTGGCCCTCTTCCCCCTGCCGATGACAAGCTGGAAGAGCTCATCCGGCAGTTTGAGGCTGAATTTGGAGATAGCTTTGGGCTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp AGACTTGATCTTCCCCTCCAGCCACTCGAGGTAGTCAGGGCATTCTaGGCCATCGCAGTTGCAGTTGGGTGGTTTCATACCATGCCGCGC +
Preference number: 5 (lower is better)
Translates to: RLDLPLQPLEVVRAF*AIAVAVGWFHTMPR
Trigger: GCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCCTGACTACCTCGAGTGGCTGGAGGGGAAGATCAAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 90 bp TTCTCCACTATTTGTTCGACGCAATCGCAGGTGGGGAACTCGGCCTaGGCTCTCTTGGCAGGTGTGTCCAGCAGACTCTTGGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: FSTICSTQSQVGNSA*ALLAGVSSRLLVGV
Trigger: CACACCCACCAAGAGTCTGCTGGACACACCTGCCAAGAGAGCCCAGGCCGAGTTCCCCACCTGCGATTGCGTCGAACAAATAGTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS-3UTR CAA 90 bp TTGGCAACATGGTGGGCACGGCCCCTAAGAACCTCGCACTCCAGCTCCAGCGTGAGACTCAATCTTGATTaGCTTGGGGGAACGGGTAGC +
Preference number: 5 (lower is better)
Translates to: LATWWARPLRTSHSSSSVRLNLD*LGGTGS
Trigger: GCTACCCGTTCCCCCAAGCAAATCAAGATTGAGTCT...CACGCTGGAGCTGGAGTGCGAGGTTCTTAGGGGCCGTGCCCACCATGTTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GGTCTCTGCTCAGGGGAGAAGCCTATTGCTCTGCTCTTGCCTGCAGCTCTGCAGTCCGTGTTGGCCATCTaGTACAGGGGGAGAACATGC +
Preference number: 5 (lower is better)
Translates to: GLCSGEKPIALLLPAALQSVLAI*YRGRTC
Trigger: GCATGTTCTCCCCCTGTACAAGATGGCCAACACGGA...CTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGGCTTCTCCCCTGAGCAGAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGGAAGCAGATACTCCTaGGGGCCTGGGTACGCAGGC +
Preference number: 5 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGGSRYS*GPGYAG
Trigger: GCCTGCGTACCCAGGCCCCAAGGAGTATCTGCTTCC...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACACAGCGCCCGAGGGGCTaGGCTCGCCAGACCCAGCGA +
Preference number: 5 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTQRPRG*ARQTQR
Trigger: TCGCTGGGTCTGGCGAGCCAAGCCCCTCGGGCGCTG...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCTCAGCATGCATTGGCTaGGCAACATGGTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGSACIG*ATWWAR
Trigger: CCGTGCCCACCATGTTGCCAAGCCAATGCATGCTGA...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCCCTATTGCTCTGCTCTaGCCTGCAGCTCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGPIALL*PAALQE
Trigger: CTCCTGCAGAGCTGCAGGCAAGAGCAGAGCAATAGG...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 90 bp CTTGACCTTGGGCTTGGTAGGCAGGGCCTCAGGCCGCTTGAATACTaGCTGGATGTAATCACTGGCGCTGCCCAACAACTGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LDLGLGRQGLRPLEY*LDVITGAAQQLLQF
Trigger: GAACTGGAGCAGTTGTTGGGCAGCGCCAGTGATTACATCCAGTCAGTATTCAAGCGGCCTGAGGCCCTGCCTACCAAGCCCAAGGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS-3UTR CAA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCCAGGTCCGGTCATCGTaGAGGCCGCATCTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLQVRSS*RPHLRL
Trigger: CAGCCGGAGATGCGGCCTCAACGATGACCGGACCTG...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGCCAAAGGAACTGAGCTaGTCAGGGACGATGGCAGGA +
Preference number: 5 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWPKELS*SGTMAG
Trigger: TCCTGCCATCGTCCCTGACAAGCTCAGTTCCTTTGG...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGTCCACCCCCTCGGAGTaGGGACTCACTCCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGSTPSE*GLTPSH
Trigger: ATGGCTGGGAGTGAGTCCCAACTCCGAGGGGGTGGA...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 90 bp TGTGTCCAGCAGACTCTTGGTGGGTGTGTCCAGGTACTTAAGAGGTaGCTCCAAGAAGCCACTGAGGGTGGGTGTGAGTGGGTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: CVQQTLGGCVQVLKR*LQEATEGGCEWVLS
Trigger: GCTGAGAACCCACTCACACCCACCCTCAGTGGCTTCTTGGAGTCACCTCTTAAGTACCTGGACACACCCACCAAGAGTCTGCTGGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS-3UTR CAA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACTTGACAGCCGCTCCTaGTCCCCACGGCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGLDSRS*SPRPGS
Trigger: GGAGCCGGGCCGTGGGGACAAGGAGCGGCTGTCAAG...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCATGGGATCGGGGCTaGGGCGAGGCATGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGPWDRG*GEAWAR
Trigger: CCTGGCCCATGCCTCGCCCAAGCCCCGATCCCATGG...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGTCGGCCTGGGCTCTCTaGGCAGGTGTGTCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRSAWAL*AGVSSR
Trigger: TCTGCTGGACACACCTGCCAAGAGAGCCCAGGCCGA...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCGTTGGGGTCTTTGCCTaGGCAAGCGCAGGTCCGGTC +
Preference number: 5 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLVGVFA*ASAGPV
Trigger: GACCGGACCTGCGCTTGCCAAGGCAAAGACCCCAAC...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCAAGAGGGGGCGGTGGAACTTGCGAGGTGTCTaGCTCCGAGCATACTTGCAG +
Preference number: 5 (lower is better)
Translates to: CKLLFPKEAGGRTKRGRWNLRGV*LRAYLQ
Trigger: CTGCAAGTATGCTCGGAGCAAGACACCTCGCAAGTT...CCACCGCCCCCTCTTGGTCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS GCA 90 bp AACTCATCCGTGTTGGCCATCTTGTACAGGGGGAGAACATGCAGCTaGTCATCCTCGGGAATCTTGCCCACGCAGCGATTGTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: NSSVLAILYRGRTCS*SSSGILPTQRLSSL
Trigger: CAAGGAAGACAATCGCTGCGTGGGCAAGATTCCCGAGGATGAGCAGCTGCATGTTCTCCCCCTGTACAAGATGGCCAACACGGATGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 90 bp AGCGTACTTGGAGTGGAAGCCATTGACGGAGGTCAGGCTGGGCTGTaGATAGTAGGAGTGGTAGGAGTACACGCTGTTCATGCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: SVLGVEAIDGGQAGL*IVGVVGVHAVHAVR
Trigger: CCTTACAGCATGAACAGCGTGTACTCCTACCACTCCTACTATGCACAGCCCAGCCTGACCTCCGTCAATGGCTTCCACTCCAAGTACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS-3UTR CAA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAGCCTCCACCTTGACCTaGGGCTTGGTAGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTASTLT*GLVGRA
Trigger: GGCCCTGCCTACCAAGCCCAAGGTCAAGGTGGAGGC...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAGTGGGACAGGTGAACTaGGTGGGGGCCACCAGCCAG +
Preference number: 5 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAVGQVN*VGATSQ
Trigger: CTGGCTGGTGGCCCCCACCAAGTTCACCTGTCCCAC...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAAGTGGGTTCTCAGCCTaGGTGGGTGTGGCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSSGFSA*VGVASC
Trigger: ACAGGAGGCCACACCCACCAAGGCTGAGAACCCACT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACAGGTGTTGGGGTCTTaGCCTTGGCAAGCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSQVLGS*PWQAQV
Trigger: GACCTGCGCTTGCCAAGGCAAAGACCCCAACACCTG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGTCATCCTCGGGAATCTaGCCCACGCAGCGATTGTCT +
Preference number: 5 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGSSSGI*PTQRLS
Trigger: AGACAATCGCTGCGTGGGCAAGATTCCCGAGGATGA...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGCCAAACTCATCCGTGTaGGCCATCTTGTACAGGGGG +
Preference number: 5 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGPNSSV*AILYRG
Trigger: CCCCCTGTACAAGATGGCCAACACGGATGAGTTTGG...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACTCCGCTGCCCACCTTaGCATTCTGGTTCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSLRCPP*HSGSPR
Trigger: GCGAGGAGAACCAGAATGCAAAGGTGGGCAGCGGAG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGCAGGGGCTCCACGGTTaGCCTCGCAGCCGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQQGLHG*PRSRPP
Trigger: TGGAGGACGGCTGCGAGGCAAACCGTGGAGCCCCTG...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCCTTTCAGGGCCGAGTaGAAATCCCCTGCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVPFRAE*KSPAPS
Trigger: GCTGGGGGCAGGGGATTTCAACTCGGCCCTGAAAGG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGAGGGCCAGCCCGTGGTaGGGCTGGTTGAGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVRASPW*GWLRFL
Trigger: CAAGAACCTCAACCAGCCCAACCACGGGCTGGCCCT...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CCA 90 bp TCAAGAGTCTACAAGGGTGAAGGCAAGTGGCTTCAGTCTCGTGGATaGATGCCTCTTCTCAACCCCTCTTCACCTCCTCTGCAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: SRVYKGEGKWLQSRG*MPLLNPSSPPLQQS
Trigger: AGACTGCTGCAGAGGAGGTGAAGAGGGGTTGAGAAGAGGCATCCATCCACGAGACTGAAGCCACTTGCCTTCACCCTTGTAGACTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CCA 90 bp GCCAATGCTGCTGGTCCACTGAGCAGCAAGGTGGAAGTGAGGCTGTaGAACATACAGGTGTCTCAGGACTCAGGTGAGCAATTTGCCATA +
Preference number: 5 (lower is better)
Translates to: ANAAGPLSSKVEVRL*NIQVSQDSGEQFAI
Trigger: TATGGCAAATTGCTCACCTGAGTCCTGAGACACCTGTATGTTCCACAGCCTCACTTCCACCTTGCTGCTCAGTGGACCAGCAGCATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS CCA 90 bp TCAAGAGGTCCTTGTCTCCCCGGCTTAGAGGGTCAGGAAATGGGTTaGGTCATCCTCTTTACCCTGCTGGCACTTGGAATTCTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: SRGPCLPGLEGQEMG*VILFTLLALGILCL
Trigger: CAGGCAAAGAATTCCAAGTGCCAGCAGGGTAAAGAGGATGACCCAACCCATTTCCTGACCCTCTAAGCCGGGGAGACAAGGACCTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS-3UTR CAA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACACTCCCAGTCGGGCTTTaGGTCTACCCGCCAAGGACC +
Preference number: 5 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTLPVGL*VYPPRT
Trigger: GGTCCTTGGCGGGTAGACCAAAAGCCCGACTGGGAG...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAACCTTGACCTTGGGCTaGGTAGGCAGGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: NTTLLRADYSTVNGSKTATLTLG*VGRASG
Trigger: GCCTGAGGCCCTGCCTACCAAGCCCAAGGTCAAGGT...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACAAGGAAGAGGCTGCGCTaGTGGTGGAGGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTRKRLR*WWRCCC
Trigger: GCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCT...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGACCTCCAGCTGGTGTaGGGAGCTTCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGDLQLV*GASSSS
Trigger: AGAAGAAGAAGAAGCTCCCAACACCAGCTGGAGGTC...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAGAGGCACCACAGGTGTaGGGGTCTTTGCCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSEAPQV*GSLPWQ
Trigger: TTGCCAAGGCAAAGACCCCAACACCTGTGGTGCCTC...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGTCTTGGGGGACATGCTaGGGCCTCCTGAGTACTGTC +
Preference number: 5 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRSWGTC*GLLSTV
Trigger: GACAGTACTCAGGAGGCCCAAGCATGTCCCCCAAGA...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGTGGGGTGGCAGCGGTaGGGCTTCTTAAGCGGCGTG +
Preference number: 5 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGVGWQR*GFLSGV
Trigger: CACGCCGCTTAAGAAGCCCAACCGCTGCCACCCCAC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 90 bp GGTGGAAGTGAGGCTGTGGAACATACAGGTGTCTCAGGACTCAGGTaGGCAATTTGCCATAGAATAGTCCAGGTAGGTGCCCATCACCTC +
Preference number: 5 (lower is better)
Translates to: GGSEAVEHTGVSGLR*AICHRIVQVGAHHL
Trigger: GAGGTGATGGGCACCTACCTGGACTATTCTATGGCAAATTGCTCACCTGAGTCCTGAGACACCTGTATGTTCCACAGCCTCACTTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS CCA 90 bp CCTTCTCGCCTAGAACAGTCAAGAGTCTACAAGGGTGAAGGCAAGTaGCTTCAGTCTCGTGGATGGATGCCTCTTCTCAACCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PSRLEQSRVYKGEGK*LQSRGWMPLLNPSS
Trigger: TGAAGAGGGGTTGAGAAGAGGCATCCATCCACGAGACTGAAGCCACTTGCCTTCACCCTTGTAGACTCTTGACTGTTCTAGGCGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAATGAGCTCTTCCAGCTaGTCATCGGCAGGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSMSSSS*SSAGGR
Trigger: TCTTCCCCCTGCCGATGACAAGCTGGAAGAGCTCAT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGACCTGCGAGGCGGAACTaGCGAGGTGTCTTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGPARRN*RGVLLR
Trigger: TCGGAGCAAGACACCTCGCAAGTTCCGCCTCGCAGG...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCAGCGATTGTCTTCCTaGGTCAGGGTGCAGACCACG +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVQRLSS*VRVQTT
Trigger: CGTGGTCTGCACCCTGACCAAGGAAGACAATCGCTG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGTTCTCGTCCAGGAAGTaGTGTTCACTGTCCGACCAC +
Preference number: 5 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGFSSRK*CSLSDH
Trigger: GTGGTCGGACAGTGAACACAACTTCCTGGACGAGAA...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGGCCAGCTGCTTCATCTaGGCTTCCCAGAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQASCFI*ASQRAS
Trigger: GCTGGCCCTCTGGGAAGCCAAGATGAAGCAGCTGGC...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGATGGTGCGTGCGGCGGTaGGTACAGCTAGTGCAAGCG +
Preference number: 5 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGWCVRR*VQLVQA
Trigger: CGCTTGCACTAGCTGTACCAACCGCCGCACGCACCA...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGACAGGGCACACTGGGGAGCCAACAAAGTTTGACTaGGTGATGATGAGTGTTGCT +
Preference number: 5 (lower is better)
Translates to: PNVCTARGWCPWTGHTGEPTKFD*VMMSVA
Trigger: AGCAACACTCATCATCACCAAGTCAAACTTTGTTGG...CTCCCCAGTGTGCCCTGTCCACGGACACCATCCACGTGCAGTGCAAACATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGATGAACCAAGGCTGTTaGGGCTGGGGGACAGACGTC +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVMNQGC*GWGTDV
Trigger: GACGTCTGTCCCCCAGCCCAAACAGCCTTGGTTCAT...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGGCGTTATCATCGACTCATaGTCAACCGTCCTTGCACAT +
Preference number: 5 (lower is better)
Translates to: QNHLGYTRDLPNQQPTWGVIIDS*STVLAH
Trigger: ATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC...GCCCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATCCATCTGGTCTCCCTaGGTGTGCCCTTGGGACTCC +
Preference number: 5 (lower is better)
Translates to: NTTLLRADYSTVNGSKTASIWSP*VCPWDS
Trigger: GGAGTCCCAAGGGCACACCAAGGGAGACCAGATGGA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 90 bp ACCAACAGGTCCTTCTCGCCTAGAACAGTCAAGAGTCTACAAGGGTaGAGGCAAGTGGCTTCAGTCTCGTGGATGGATGCCTCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: TNRSFSPRTVKSLQG*RQVASVSWMDASSQ
Trigger: TTGAGAAGAGGCATCCATCCACGAGACTGAAGCCACTTGCCTTCACCCTTGTAGACTCTTGACTGTTCTAGGCGAGAAGGACCTGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CCA 90 bp CCGGATAGAGGCGACCGTGGGGCCAGATCCCAAGTGAGTATAATATaGACCTTCATCTTTCTCCACTATTTGTTCGACGCAATCGCAGGT +
Preference number: 5 (lower is better)
Translates to: PDRGDRGARSQVSII*TFIFLHYLFDAIAG
Trigger: ACCTGCGATTGCGTCGAACAAATAGTGGAGAAAGATGAAGGTCCATATTATACTCACTTGGGATCTGGCCCCACGGTCGCCTCTATCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 90 bp GGGTCAGGAAATGGGTTGGGTCATCCTCTTTACCCTGCTGGCACTTaGAATTCTTTGCCTGTTCATCACAGCTTATTTGTCACTGCCCCC +
Preference number: 5 (lower is better)
Translates to: GSGNGLGHPLYPAGT*NSLPVHHSLFVTAP
Trigger: GGGGGCAGTGACAAATAAGCTGTGATGAACAGGCAAAGAATTCCAAGTGCCAGCAGGGTAAAGAGGATGACCCAACCCATTTCCTGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACCATCGCAGTTGCAGTaGGGTGGTTTCATACCATGC +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSPSQLQ*GGFIPC
Trigger: GCATGGTATGAAACCACCCAACTGCAACTGCGATGG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATCTTCCTCTTTGGGATaGTCCCCTGCGAGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: NTTLLRADYSTVNGSKTASSSLG*SPARRN
Trigger: GTTCCGCCTCGCAGGGGACAATCCCAAAGAGGAAGA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGGCGTTGCCGCTGTACTaGAAGGAGCTGAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVALPLY*KELKWF
Trigger: GAACCACTTCAGCTCCTTCAAGTACAGCGGCAACGC...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGCTCTCCACCACCGCGTaGCCGCTGTACTTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQLSTTA*PLYLKE
Trigger: CTCCTTCAAGTACAGCGGCAACGCGGTGGTGGAGAG...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGGTGTCTTGCCCATCTaGCCAGCGTCTCTGGGCACA +
Preference number: 5 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGGVLPI*PASLGT
Trigger: TGTGCCCAGAGACGCTGGCAAGATGGGCAAGACACC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAGTGCTGTTCCCAAACTaGCAGGGGCTCCACGGTTTG +
Preference number: 5 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAVLFPN*QGLHGL
Trigger: CAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCAC...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCAAGAAAAGGGATCATCTaGGCCCGGTGGGTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSRKGII*ARWVLH
Trigger: GTGAAGAACCCACCGGGCCAAGATGATCCCTTTTCT...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACACAAATCAGCATGGGCTaGAGCACGGCAACCACACCG +
Preference number: 5 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTQISMG*STATTP
Trigger: CGGTGTGGTTGCCGTGCTCAAGCCCATGCTGATTTG...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCATTACAAGCACTTCCCTaGCACGCAACAGGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSLQALP*HATGRE
Trigger: TTCCCTGCCTGTTGCGTGCAAGGGAAGTGCTTGTAA...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AGCAGCCTATCTCCTACTGCAGAAACTGATGAACCAAGGCTGTTTGGGCTGGGGGAGCCCACCTTGTTTTaGGTTGGTTGTGGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: SSLSPTAETDEPRLFGLGEPTLF*VGCGFR
Trigger: TCTGAAACCACAACCAACCAAAAACAAGGTGGGCTC...CCCCAGCCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATAGGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGTCTGGGCCATCGCAGTaGCAGTTGGGTGGTTTCATA +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVSGPSQ*QLGGFI
Trigger: TATGAAACCACCCAACTGCAACTGCGATGGCCCAGA...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGAGTGTCCAGCAGACTCTaGGTGGGTGTGTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGVSSRL*VGVSRY
Trigger: GTACCTGGACACACCCACCAAGAGTCTGCTGGACAC...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGCATACTTGCAGCCGTaGAAGTACATGCTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRAYLQP*KYMLQE
Trigger: TTCCTGGAGCATGTACTTCAACGGCTGCAAGTATGC...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCATTGCTCCGAGCATACTaGCAGCCGTTGAAGTACATG +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSLLRAY*QPLKYM
Trigger: CATGTACTTCAACGGCTGCAAGTATGCTCGGAGCAA...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACTCGGACAGAGGTGTCTaGCCCATCTTGCCAGCGTCT +
Preference number: 5 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINSDRGV*PILPAS
Trigger: AGACGCTGGCAAGATGGGCAAGACACCTCTGTCCGA...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTACACCGTTAGTCCTCTaGGGGGACATGCTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGTPLVL*GDMLGP
Trigger: AGGCCCAAGCATGTCCCCCAAGAGGACTAACGGTGT...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACATTGTCAACCGTCCTaGCACATCTACTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSHCQPS*HIYCCV
Trigger: CACACAGCAGTAGATGTGCAAGGACGGTTGACAATG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACTCCCTTGGTGTGCCCTaGGGACTCCCAGAGATGTCT +
Preference number: 5 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINSLGVP*GLPEMS
Trigger: AGACATCTCTGGGAGTCCCAAGGGCACACCAAGGGA...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCTCAATCTTGATTTGCTaGGGGGAACGGGTAGCAAAG +
Preference number: 5 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLSILIC*GERVAK
Trigger: CTTTGCTACCCGTTCCCCCAAGCAAATCAAGATTGA...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCAATGGGGTTCCACAGCTaGTCTTGGAACCCAGGACTA +
Preference number: 5 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAMGFHS*SWNPGL
Trigger: TAGTCCTGGGTTCCAAGACAAGCTGTGGAACCCCAT...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGCTGGCTTTTCACAGCTaGGGTTCAACTTCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGLAFHS*GSTSCF
Trigger: AAAACAGGAAGTTGAACCCAAGCTGTGAAAAGCCAG...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACTGTTCATCTCAGGGCTaGGTGGTCATCCACCGTGTG +
Preference number: 5 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINCSSQG*VVIHRV
Trigger: CACACGGTGGATGACCACCAAGCCCTGAGATGAACA...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACACACACCATCGTCACCTaGGTGAGAAGGCAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTHTIVT*VRRQSS
Trigger: ACTGCTTTGCCTTCTCACCAAGGTGACGATGGTGTG...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGAGACTGGAGCCCACCTaGTTTTTGGTTGGTTGTGGT +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVRLEPT*FLVGCG
Trigger: ACCACAACCAACCAAAAACAAGGTGGGCTCCAGTCT...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACACCTTCTCGACTTGCTTaGTTTGGCCACCAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTPSRLA*FGHQGK
Trigger: CTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGG...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACATTCTTCTTCTTCTCCTaGGGTGGTCTGTCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTFFFFS*GGLSGS
Trigger: GCTTCCAGACAGACCACCCAAGGAGAAGAAGAAGAA...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GGCATGCACCATTGTCCAATGTGGAAATTCAGGGATCAGGATAGATGCATTAACCCCGAAGACTCAATCTaGATTTGCTTGGGGGAACGG +
Preference number: 5 (lower is better)
Translates to: GMHHCPMWKFRDQDRCINPEDSI*ICLGER
Trigger: CCGTTCCCCCAAGCAAATCAAGATTGAGTCTTCGGG...GTTAATGCATCTATCCTGATCCCTGAATTTCCACATTGGACAATGGTGCATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGAAAGGAACCAAATGTTaGCACTGCACGTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVKGTKC*HCTWMV
Trigger: CACCATCCACGTGCAGTGCAAACATTTGGTTCCTTT...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TGGGCTGGGGGACAGACGTCGCATGCTTTTAGCTTGTATTGGTTTCTCCTTTCACCACCTTGTTTTTGGTaGGTTGTGGTTTCAGAACGT +
Preference number: 5 (lower is better)
Translates to: WAGGQTSHAFSLYWFLLSPPCFW*VVVSER
Trigger: ACGTTCTGAAACCACAACCAACCAAAAACAAGGTGG...TGAAAGGAGAAACCAATACAAGCTAAAAGCATGCGACGTCTGTCCCCCAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGAGCTGCCTTCTCGACTaGCTTTGTTTGGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQSCLLD*LCLATK
Trigger: CTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCT...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCAGGGTATGTTGAAGTaGGCCATGTACTACAGCAGA +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVQGMLK*AMYYSR
Trigger: TCTGCTGTAGTACATGGCCAACTTCAACATACCCTG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATGTTGAAGTTGGCCATGTACTACAGCAGAGGCAGCTGGCTAATAAAACTAGGTCGGGTCTACTGGCTCTaGCTTGATGGATCTGTTGTA +
Preference number: 5 (lower is better)
Translates to: MLKLAMYYSRGSWLIKLGRVYWL*LDGSVV
Trigger: TACAACAGATCCATCAAGCAAGAGCCAGTAGACCCG...ACCTAGTTTTATTAGCCAGCTGCCTCTGCTGTAGTACATGGCCAACTTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CTTGTTTTTGGTTGGTTGTGGTTTCAGAACGTTGATAGCACCTCAGCAAGACAGGTTCCACAGCTTGTCTaGGAACCCAGGACTACCTTT +
Preference number: 5 (lower is better)
Translates to: LVFGWLWFQNVDSTSARQVPQLV*EPRTTF
Trigger: AAAGGTAGTCCTGGGTTCCAAGACAAGCTGTGGAAC...CTGTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACAACCAACCAAAAACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGGAAGAACAATACAACACAACATGTGGTTTCAGAACGTaGATAGCACCTCAGCAAGAC +
Preference number: 5 (lower is better)
Translates to: AFSTCFVWPPREEQYNTTCGFRT*IAPQQD
Trigger: GTCTTGCTGAGGTGCTATCAACGTTCTGAAACCACA...TGTTGTGTTGTATTGTTCTTCCCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CGGAAAAATCACCCGACAGCCGTAGTTTCTTCTTCAAAGTGCTGGGGAAGTGGGCTTGTTTTTGGTTGGTaGTGGTTTCAGAACGTTGAT +
Preference number: 5 (lower is better)
Translates to: RKNHPTAVVSSSKCWGSGLVFGW*WFQNVD
Trigger: ATCAACGTTCTGAAACCACAACCAACCAAAAACAAG...CCCACTTCCCCAGCACTTTGAAGAAGAAACTACGGCTGTCGGGTGATTTTTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACATTGGTCCAGGGTATGTaGAAGTTGGCCATGTACTAC +
Preference number: 5 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTLVQGM*KLAMYY
Trigger: GTAGTACATGGCCAACTTCAACATACCCTGGACCAA...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATCACAGAAAGGGAGATAGCTGCCTTCTCGACTTGCTTTGTTTGGCCACCAAGGCACCTCAAAAATGTTTaGGTCCAGGGTATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: ITEREIAAFSTCFVWPPRHLKNV*VQGMLK
Trigger: CTTCAACATACCCTGGACCAAAACATTTTTGAGGTG...CCTTGGTGGCCAAACAAAGCAAGTCGAGAAGGCAGCTATCTCCCTTTCTGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp ATCAGAATCACCTGGGTTACACTCGGGACCTTCCAAACCAACAGCCAACCTGGGACACATCCTATTGCCTaGAGACATTGCAAAAATCTA +
Preference number: 5 (lower is better)
Translates to: IRITWVTLGTFQTNSQPGTHPIA*RHCKNL
Trigger: TAGATTTTTGCAATGTCTCAAGGCAATAGGATGTGT...CCCAGGTTGGCTGTTGGTTTGGAAGGTCCCGAGTGTAACCCAGGTGATTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp TTAAAAATCCCTTGCTCTGCAAACTACTGTTCCCAAAAGAGGCTGGTGGAAGGATGGAGACTAGCAAGCTaGAAGCCATCTACTTCCAAC +
Preference number: 5 (lower is better)
Translates to: LKIPCSANYCSQKRLVEGWRLAS*KPSTSN
Trigger: GTTGGAAGTAGATGGCTTCAAGCTTGCTAGTCTCCA...TCCTTCCACCAGCCTCTTTTGGGAACAGTAGTTTGCAGAGCAAGGGATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGCGCTTTAAAAATCCCTaGCTCTGCAAACTACTGTTC +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVRFKNP*LCKLLF
Trigger: GAACAGTAGTTTGCAGAGCAAGGGATTTTTAAAGCG...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp GTTATCATCGACTCATTGTCAACCGTCCTTGCACATCTACTGCTGTGTGGTACAAGTTTTCCACCAGCTTaGCCTTGGTTTGAGATCTCA +
Preference number: 5 (lower is better)
Translates to: VIIDSLSTVLAHLLLCGTSFPPA*PWFEIS
Trigger: TGAGATCTCAAACCAAGGCAAAGCTGGTGGAAAACT...TGTACCACACAGCAGTAGATGTGCAAGGACGGTTGACAATGAGTCGATGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AACACAACACTGCTCAGAGCAGATTATAGCACGGTAAACGGGTCTAAGACAGCATATGACTCTTCGAACTaGGTCATGCTGTTAGGTTCT +
Preference number: 5 (lower is better)
Translates to: NTTLLRADYSTVNGSKTAYDSSN*VMLLGS
Trigger: AGAACCTAACAGCATGACCAAGTTCGAAGAGTCATA...TGCTGTCTTAGACCCGTTTACCGTGCTATAATCTGCTCTGAGCAGTGTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp CCAACAAAGTTTGACTTGGTGATGATGAGTGTTGCTCCCATCAGGCCCAACCTCAAAAAGGATACATACTaGCAATTTCTAGGCACCCTA +
Preference number: 5 (lower is better)
Translates to: PTKFDLVMMSVAPIRPNLKKDTY*QFLGTL
Trigger: TAGGGTGCCTAGAAATTGCAAGTATGTATCCTTTTT...GAGGTTGGGCCTGATGGGAGCAACACTCATCATCACCAAGTCAAACTTTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS-3UTR CAA 90 bp AAACAGAGCAGAAAAGGAACCAAATGTTTGCACTGCACGTGGATGGTGTCCGTGAGTCCTGATAAGCTCTaGGGTATTTATTTCAAAAGC +
Preference number: 5 (lower is better)
Translates to: KQSRKGTKCLHCTWMVSVSPDKL*GIYFKS
Trigger: GCTTTTGAAATAAATACCCAAGAGCTTATCAGGACT...CACGGACACCATCCACGTGCAGTGCAAACATTTGGTTCCTTTTCTGCTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 90 bp CAGGGTTTCCTTTCTGTATATTGTCTGTTACAAGGCAAAGAAAAATaGGAGGCGCTTAATATCCGTATTCCATTAACAGCACATCCATTT +
Preference number: 5 (lower is better)
Translates to: QGFLSVYCLLQGKEK*EALNIRIPLTAHPF
Trigger: AAATGGATGTGCTGTTAATGGAATACGGATATTAAGCGCCTCTCATTTTTCTTTGCCTTGTAACAGACAATATACAGAAAGGAAACCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475405.2
CDS CAA 72 bp GCCTTTCTGGCTTCCAGCTGCCGCTGGCGGCAGGACTaGGCAGGCTCGGGCAGGCGTCGGACCTCGCGGGGG +
Preference number: 6 (lower is better)
Translates to: AFLASSCRWRQD*AGSGRRRTSRG
Trigger: CCCCCGCGAGGTCCGACGCCTGCCCGAGCCTGCCAAGTCCTGCCGCCAGCGGCAGCTGGAAGCCAGAAAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp CCTTTCTGGCTTCCAGCTGCCGCTGGCGGCAGGACTTaGCAGGCTCGGGCAGGCGTCGGACCTCGCGGGGGA +
Preference number: 6 (lower is better)
Translates to: PFWLPAAAGGRT*QARAGVGPRGG
Trigger: TCCCCCGCGAGGTCCGACGCCTGCCCGAGCCTGCCAAGTCCTGCCGCCAGCGGCAGCTGGAAGCCAGAAAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GGGCCAGGGCCGTCTGCAGTGTGTCAAGGTCTTCGCTaGCAGCAGAGCAGCCCTCAGGCCCTGGCCGGGGTC +
Preference number: 6 (lower is better)
Translates to: GPGPSAVCQGLR*QQSSPQALAGV
Trigger: GACCCCGGCCAGGGCCTGAGGGCTGCTCTGCTGGCAGCGAAGACCTTGACACACTGCAGACGGCCCTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp TGGAGGTGCTGCTGCAGGGCGGTCTGGGCCTTCTGGTaGGTGTCGGGCTCCGAGGATGGCGTGGGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: WRCCCRAVWAFW*VSGSEDGVGAS
Trigger: GGAGGCTCCCACGCCATCCTCGGAGCCCGACACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 90 bp TGGCGCTGCCCAACAACTGCTCCAGTTCAGCCATGGGATCGGGGCTaGGGCGAGGCATGGGCCAGGAGCTCCGGGGCGTTGCTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: WRCPTTAPVQPWDRG*GEAWARSSGALLEG
Trigger: CCCCTCCAGCAACGCCCCGGAGCTCCTGGCCCATGCCTCGCCCAAGCCCCGATCCCATGGCTGAACTGGAGCAGTTGTTGGGCAGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 72 bp CCAGCCTTTATTTCCACCTCGGCCGGCCTCCTCTGGTaGATCGGCCGGCGGGCCTCCCATTATCCCCGCCGG +
Preference number: 6 (lower is better)
Translates to: PAFISTSAGLLW*IGRRASHYPRR
Trigger: CCGGCGGGGATAATGGGAGGCCCGCCGGCCGATGCACCAGAGGAGGCCGGCCGAGGTGGAAATAAAGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305799.8
CDS GCA 72 bp CCTCGCAGCCGTCCTCCAGAGTGGGAAGCTGCCTGCTaGCCCTCACCGGGGAACAGCCCCCACTGGCCATCT +
Preference number: 6 (lower is better)
Translates to: PRSRPPEWEAAC*PSPGNSPHWPS
Trigger: AGATGGCCAGTGGGGGCTGTTCCCCGGTGAGGGGCAGCAGGCAGCTTCCCACTCTGGAGGACGGCTGCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GGGCCTTCTGGTGGGTGTCGGGCTCCGAGGATGGCGTaGGAGCCTCCCTCTGAAGTACAGGGGATGGGGCCG +
Preference number: 6 (lower is better)
Translates to: GPSGGCRAPRMA*EPPSEVQGMGP
Trigger: CGGCCCCATCCCCTGTACTTCAGAGGGAGGCTCCCACGCCATCCTCGGAGCCCGACACCCACCAGAAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 90 bp GCCTCCTCCTGCCGTGCCCGTGCCCTCTCCGCCAGCTGCTTCATCTaGGCTTCCCAGAGGGCCAGCCCGTGGTTGGGCTGGTTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: ASSCRARALSASCFI*ASQRASPWLGWLRF
Trigger: GAACCTCAACCAGCCCAACCACGGGCTGGCCCTCTGGGAAGCCAAGATGAAGCAGCTGGCGGAGAGGGCACGGGCACGGCAGGAGGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GAGTGGGGTGGTGGGCGTCTGTGGGAACAGCCTGGCTaGGCAGCTCGGCAAACTCAGCACCACCGTAGGCCG +
Preference number: 6 (lower is better)
Translates to: EWGGGRLWEQPG*AARQTQHHRRP
Trigger: CGGCCTACGGTGGTGCTGAGTTTGCCGAGCTGCCCAGCCAGGCTGTTCCCACAGACGCCCACCACCCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 90 bp GCCAAGGCCGAGGTGCTGTTCCCAAACTTGCAGGGGCTCCACGGTTaGCCTCGCAGCCGTCCTCCAGAGTGGGAAGCTGCCTGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: AKAEVLFPNLQGLHG*PRSRPPEWEAACCP
Trigger: GGGGCAGCAGGCAGCTTCCCACTCTGGAGGACGGCTGCGAGGCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCTCGGCCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS TCA 72 bp AAGCACCACAGAGACAGCTCGGGCCAGGCCCGACGCTaGGGTACGCTGGCTCCCTGGCACCTAGATCCAGCG +
Preference number: 6 (lower is better)
Translates to: KHHRDSSGQARR*GTLAPWHLDPA
Trigger: CGCTGGATCTAGGTGCCAGGGAGCCAGCGTACCTCAGCGTCGGGCCTGGCCCGAGCTGTCTCTGTGGTGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS GCA 72 bp CAGCAGAGCAGCCCTCAGGCCCTGGCCGGGGTCCCCTaGTGTTGTTCCCAGCCTCACGACTCATCTCACGGT +
Preference number: 6 (lower is better)
Translates to: QQSSPQALAGVP*CCSQPHDSSHG
Trigger: ACCGTGAGATGAGTCGTGAGGCTGGGAACAACAGCAGGGGACCCCGGCCAGGGCCTGAGGGCTGCTCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp TCTAGGAAGAGGCTGCGCTTGTGGTGGAGGTGCTGCTaGAGGGCGGTCTGGGCCTTCTGGTGGGTGTCGGGC +
Preference number: 6 (lower is better)
Translates to: SRKRLRLWWRCC*RAVWAFWWVSG
Trigger: GCCCGACACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 72 bp TGGGCCCAGCCAAGGCCGAGGTGCTGTTCCCAAACTTaGAGGGGCTCCACGGTTTGCCTCGCAGCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: WAQPRPRCCSQT*RGSTVCLAAVL
Trigger: GAGGACGGCTGCGAGGCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCTCGGCCTTGGCTGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp ACGGTGACCGCCGAGTCTGTGGGCACAGCCAGTGCCTaGCGGGTGGGGACGACCCCCTTCTTCTCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: TVTAESVGTASA*RVGTTPFFSFC
Trigger: GCAGAAAGAGAAGAAGGGGGTCGTCCCCACCCGGCAGGCACTGGCTGTGCCCACAGACTCGGCGGTCACCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GGACACGGTGACCGCCGAGTCTGTGGGCACAGCCAGTaGCTGCCGGGTGGGGACGACCCCCTTCTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: GHGDRRVCGHSQ*LPGGDDPLLLF
Trigger: AAAGAGAAGAAGGGGGTCGTCCCCACCCGGCAGGCACTGGCTGTGCCCACAGACTCGGCGGTCACCGTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp TCACCAGCCTTTATTTCCACCTCGGCCGGCCTCCTCTaGTGCATCGGCCGGCGGGCCTCCCATTATCCCCGC +
Preference number: 6 (lower is better)
Translates to: SPAFISTSAGLL*CIGRRASHYPR
Trigger: GCGGGGATAATGGGAGGCCCGCCGGCCGATGCACCAGAGGAGGCCGGCCGAGGTGGAAATAAAGGCTGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305799.8
CDS CCA 72 bp CAACAACTGCTCCAGTTCAGCCATGGGATCGGGGCTTaGGCGAGGCATGGGCCAGGAGCTCCGGGGCGTTGC +
Preference number: 6 (lower is better)
Translates to: QQLLQFSHGIGA*ARHGPGAPGRC
Trigger: GCAACGCCCCGGAGCTCCTGGCCCATGCCTCGCCCAAGCCCCGATCCCATGGCTGAACTGGAGCAGTTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp CACTGGCGCTGCCCAACAACTGCTCCAGTTCAGCCATaGGATCGGGGCTTGGGCGAGGCATGGGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: HWRCPTTAPVQP*DRGLGEAWARS
Trigger: GCTCCTGGCCCATGCCTCGCCCAAGCCCCGATCCCATGGCTGAACTGGAGCAGTTGTTGGGCAGCGCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp GGTCTGGGCCTTCTGGTGGGTGTCGGGCTCCGAGGATaGCGTGGGAGCCTCCCTCTGAAGTACAGGGGATGG +
Preference number: 6 (lower is better)
Translates to: GLGLLVGVGLRG*RGSLPLKYRGW
Trigger: CCATCCCCTGTACTTCAGAGGGAGGCTCCCACGCCATCCTCGGAGCCCGACACCCACCAGAAGGCCCAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp AGGCGTCGGACCTCGCGGGGGAAGGCGGTGAGCACCTaGATGGCTCCGCTGCCCACCTTTGCATTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: RRRTSRGKAVST*MAPLPTFAFWF
Trigger: GAACCAGAATGCAAAGGTGGGCAGCGGAGCCATCCAGGTGCTCACCGCCTTCCCCCGCGAGGTCCGACGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GCAGACCAAAGGACTGCCAGGCCCTGTCCAGCTGGCTaGCCCCTGCGGCTGGAATCCTGCCCTCCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: ADQRTARPCPAG*PLRLESCPPLL
Trigger: AAGGAGAGGAGGGCAGGATTCCAGCCGCAGGGGCCAGCCAGCTGGACAGGGCCTGGCAGTCCTTTGGTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp CCCAGCAGACTGGGTCCAGCGGGCTCTCTAGCACCATaGACCGGCACCCCTGAGGCGCTTAGCTGCCGTGAG +
Preference number: 6 (lower is better)
Translates to: PSRLGPAGSLAP*TGTPEALSCRE
Trigger: CTCACGGCAGCTAAGCGCCTCAGGGGTGCCGGTCAATGGTGCTAGAGAGCCCGCTGGACCCAGTCTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp CCAACAACTGCTCCAGTTCAGCCATGGGATCGGGGCTaGGGCGAGGCATGGGCCAGGAGCTCCGGGGCGTTG +
Preference number: 6 (lower is better)
Translates to: PTTAPVQPWDRG*GEAWARSSGAL
Trigger: CAACGCCCCGGAGCTCCTGGCCCATGCCTCGCCCAAGCCCCGATCCCATGGCTGAACTGGAGCAGTTGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 72 bp GGGGCCGGGGAGGAAGAGGGTGCCTCCACCTTGACCTaGGGCTTGGTAGGCAGGGCCTCAGGCCGCTTGAAT +
Preference number: 6 (lower is better)
Translates to: GAGEEEGASTLT*GLVGRASGRLN
Trigger: ATTCAAGCGGCCTGAGGCCCTGCCTACCAAGCCCAAGGTCAAGGTGGAGGCACCCTCTTCCTCCCCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 72 bp CTGGGCCCAGCCAAGGCCGAGGTGCTGTTCCCAAACTaGCAGGGGCTCCACGGTTTGCCTCGCAGCCGTCCT +
Preference number: 6 (lower is better)
Translates to: LGPAKAEVLFPN*QGLHGLPRSRP
Trigger: AGGACGGCTGCGAGGCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCTCGGCCTTGGCTGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 90 bp TCAGTCAGGCTGGGCCCAGCCAAGGCCGAGGTGCTGTTCCCAAACTaGCAGGGGCTCCACGGTTTGCCTCGCAGCCGTCCTCCAGAGTGG +
Preference number: 6 (lower is better)
Translates to: SVRLGPAKAEVLFPN*QGLHGLPRSRPPEW
Trigger: CCACTCTGGAGGACGGCTGCGAGGCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCTCGGCCTTGGCTGGGCCCAGCCTGACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS TCA 72 bp GCCACCAGATCGTGGGCATCTTCCAGGCGAGCAGTATaGGCTGGGCCTGGGGCAGCCTCCCAGTCGGGCTTT +
Preference number: 6 (lower is better)
Translates to: ATRSWASSRRAV*AGPGAASQSGF
Trigger: AAAGCCCGACTGGGAGGCTGCCCCAGGCCCAGCTCATACTGCTCGCCTGGAAGATGCCCACGATCTGGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS TCA 72 bp GGCTGGTGGGGTTCCCATACTTCCGGAGGGTGTCGGTaGGCTCCTGGTAGAGGGTGTCTCCGAGGCTACGGG +
Preference number: 6 (lower is better)
Translates to: GWWGSHTSGGCR*APGRGCLRGYG
Trigger: CCCGTAGCCTCGGAGACACCCTCTACCAGGAGCTCACCGACACCCTCCGGAAGTATGGGAACCCCACCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp CGCTGTTCATGCTGTAAGGGTCGGAGGGCCGGCAGTTaGCCAGCACCGAGTAGCTCTCCACCACCGCGTTGC +
Preference number: 6 (lower is better)
Translates to: RCSCCKGRRAGS*PAPSSSPPPRC
Trigger: GCAACGCGGTGGTGGAGAGCTACTCGGTGCTGGGCAACTGCCGGCCCTCCGACCCTTACAGCATGAACAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GTGGGCATCTTCCAGGCGAGCAGTATGAGCTGGGCCTaGGGCAGCCTCCCAGTCGGGCTTTTGGTCTACCCG +
Preference number: 6 (lower is better)
Translates to: VGIFQASSMSWA*GSLPVGLLVYP
Trigger: CGGGTAGACCAAAAGCCCGACTGGGAGGCTGCCCCAGGCCCAGCTCATACTGCTCGCCTGGAAGATGCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GCCAGGATGAGGATGACGATCACAGCGTTCTGGCAGTaGTGGCCTGCCCGGTGCCGCACCAGGCAGAGTAGC +
Preference number: 6 (lower is better)
Translates to: ARMRMTITAFWQ*WPARCRTRQSS
Trigger: GCTACTCTGCCTGGTGCGGCACCGGGCAGGCCACCACTGCCAGAACGCTGTGATCGTCATCCTCATCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp GAGCAGCCCTCAGGCCCTGGCCGGGGTCCCCTGCTGTaGTTCCCAGCCTCACGACTCATCTCACGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: EQPSGPGRGPLL*FPASRLISRLK
Trigger: CTTCAACCGTGAGATGAGTCGTGAGGCTGGGAACAACAGCAGGGGACCCCGGCCAGGGCCTGAGGGCTGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp CTAGCACCATTGACCGGCACCCCTGAGGCGCTTAGCTaGCGTGAGTCCCCATGGTACACTGGCCCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: LAPLTGTPEALS*RESPWYTGPES
Trigger: GGACTCAGGGCCAGTGTACCATGGGGACTCACGGCAGCTAAGCGCCTCAGGGGTGCCGGTCAATGGTGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GGTTTCATACCATGCCGCGCGAGGGCCAGGGCCGTCTaGAGTGTGTCAAGGTCTTCGCTGCCAGCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: GFIPCRARARAV*SVSRSSLPAEQ
Trigger: CTGCTCTGCTGGCAGCGAAGACCTTGACACACTGCAGACGGCCCTGGCCCTCGCGCGGCATGGTATGAAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GGGCCATCGCAGTTGCAGTTGGGTGGTTTCATACCATaGCGCGCGAGGGCCAGGGCCGTCTGCAGTGTGTCA +
Preference number: 6 (lower is better)
Translates to: GPSQLQLGGFIP*RARARAVCSVS
Trigger: TGACACACTGCAGACGGCCCTGGCCCTCGCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp ACCTGTTCTAGGAAGAGGCTGCGCTTGTGGTGGAGGTaGTGCTGCAGGGCGGTCTGGGCCTTCTGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: TCSRKRLRLWWR*CCRAVWAFWWV
Trigger: CACCCACCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 72 bp GCTTCTCAGTCAGGCTGGGCCCAGCCAAGGCCGAGGTaGTGTTCCCAAACTTGCAGGGGCTCCACGGTTTGC +
Preference number: 6 (lower is better)
Translates to: ASQSGWAQPRPR*CSQTCRGSTVC
Trigger: GCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCTCGGCCTTGGCTGGGCCCAGCCTGACTGAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GTCAGGGCATTCTGGGCCATCGCAGTTGCAGTTGGGTaGTTTCATACCATGCCGCGCGAGGGCCAGGGCCGT +
Preference number: 6 (lower is better)
Translates to: VRAFWAIAVAVG*FHTMPREGQGR
Trigger: ACGGCCCTGGCCCTCGCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp TCGTGCACCTGTTCTAGGAAGAGGCTGCGCTTGTGGTaGAGGTGCTGCTGCAGGGCGGTCTGGGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SCTCSRKRLRLW*RCCCRAVWAFW
Trigger: CCAGAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGTGCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp GTGTCGTGCACCTGTTCTAGGAAGAGGCTGCGCTTGTaGTGGAGGTGCTGCTGCAGGGCGGTCTGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: VSCTCSRKRLRL*WRCCCRAVWAF
Trigger: GAAGGCCCAGACCGCCCTGCAGCAGCACCTCCACCACAAGCGCAGCCTCTTCCTAGAACAGGTGCACGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp TGCGGCTCCACCTTGAGGGAGGGCTTCAGGCCTTGCTaGGACAATCCACCCTTCAGAGACAGGCCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: CGSTLREGFRPC*DNPPFRDRPGS
Trigger: GGACCCAGGCCTGTCTCTGAAGGGTGGATTGTCCCAGCAAGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp CGGACAGAGGTGTCTTGCCCATCTTGCCAGCGTCTCTaGGCACAGGCTCAGCCTGGGTCAGCGGGTCTACTG +
Preference number: 6 (lower is better)
Translates to: RTEVSCPSCQRL*AQAQPGSAGLL
Trigger: CAGTAGACCCGCTGACCCAGGCTGAGCCTGTGCCCAGAGACGCTGGCAAGATGGGCAAGACACCTCTGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp TGGGTGGTCTGTCTGGAAGCCGTGGGACAGGTGAACTaGGTGGGGGCCACCAGCCAGGAGCAGAAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: WVVCLEAVGQVN*VGATSQEQKAL
Trigger: CAGAGCCTTCTGCTCCTGGCTGGTGGCCCCCACCAAGTTCACCTGTCCCACGGCTTCCAGACAGACCACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 72 bp GAGGTGCTGTTCCCAAACTTGCAGGGGCTCCACGGTTaGCCTCGCAGCCGTCCTCCAGAGTGGGAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: EVLFPNLQGLHG*PRSRPPEWEAA
Trigger: GGCAGCTTCCCACTCTGGAGGACGGCTGCGAGGCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 90 bp GCTGAAGTGGTTCTGCGGCTCCACCTTGAGGGAGGGCTTCAGGCCTaGCTGGGACAATCCACCCTTCAGAGACAGGCCTGGGTCCGACGT +
Preference number: 6 (lower is better)
Translates to: AEVVLRLHLEGGLQA*LGQSTLQRQAWVRR
Trigger: ACGTCGGACCCAGGCCTGTCTCTGAAGGGTGGATTGTCCCAGCAAGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCAGAACCACTTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 90 bp ATCTGGGGGAGGACACCAGCAGCAGCCCTCAGAAAAGGGATCATCTaGGCCCGGTGGGTTCTTCACCCTCACCCACCCTGGACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: IWGRTPAAALRKGII*ARWVLHPHPPWTQA
Trigger: TGCCTGGGTCCAGGGTGGGTGAGGGTGAAGAACCCACCGGGCCAAGATGATCCCTTTTCTGAGGGCTGCTGCTGGTGTCCTCCCCCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS GCA 72 bp GGGTCCGACGTAATGCCCGCCAGCTCCAGGGCCTCCTaGTTGATCTTCTCCGGAGTGCTCAGCTTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GSDVMPASSRAS*LIFSGVLSFSF
Trigger: GAAGGAGAAGCTGAGCACTCCGGAGAAGATCAAGCAGGAGGCCCTGGAGCTGGCGGGCATTACGTCGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp TTCTGCGGCTCCACCTTGAGGGAGGGCTTCAGGCCTTaGTGGGACAATCCACCCTTCAGAGACAGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: FCGSTLREGFRP*WDNPPFRDRPG
Trigger: CCCAGGCCTGTCTCTGAAGGGTGGATTGTCCCAGCAAGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp AGGTGCTGTTCCCAAACTTGCAGGGGCTCCACGGTTTaGCTCGCAGCCGTCCTCCAGAGTGGGAAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: RCCSQTCRGSTV*LAAVLQSGKLP
Trigger: AGGCAGCTTCCCACTCTGGAGGACGGCTGCGAGGCAAACCGTGGAGCCCCTGCAAGTTTGGGAACAGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GGTAGTCAGGGCATTCTGGGCCATCGCAGTTGCAGTTaGGTGGTTTCATACCATGCCGCGCGAGGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: GSQGILGHRSCS*VVSYHAARGPG
Trigger: CCCTGGCCCTCGCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCCTGACTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GGACCTAAGCCCTTCCAGGACAATCTGTCGGACAGGTaGGAAGAGGGGCTGTGCTTCCCGGGGCCTGGACTT +
Preference number: 6 (lower is better)
Translates to: GPKPFQDNLSDR*EEGLCFPGPGL
Trigger: AAGTCCAGGCCCCGGGAAGCACAGCCCCTCTTCCCACCTGTCCGACAGATTGTCCTGGAAGGGCTTAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp CGCAATCGCAGGTGGGGAACTCGGCCTGGGCTCTCTTaGCAGGTGTGTCCAGCAGACTCTTGGTGGGTGTGT +
Preference number: 6 (lower is better)
Translates to: RNRRWGTRPGLS*QVCPADSWWVC
Trigger: ACACACCCACCAAGAGTCTGCTGGACACACCTGCCAAGAGAGCCCAGGCCGAGTTCCCCACCTGCGATTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp AGGATGAGGATGACGATCACAGCGTTCTGGCAGTGGTaGCCTGCCCGGTGCCGCACCAGGCAGAGTAGCTTC +
Preference number: 6 (lower is better)
Translates to: RMRMTITAFWQW*PARCRTRQSSF
Trigger: GAAGCTACTCTGCCTGGTGCGGCACCGGGCAGGCCACCACTGCCAGAACGCTGTGATCGTCATCCTCATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GCAGCAGCCCTCAGAAAAGGGATCATCTTGGCCCGGTaGGTTCTTCACCCTCACCCACCCTGGACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: AAALRKGIILAR*VLHPHPPWTQA
Trigger: TGCCTGGGTCCAGGGTGGGTGAGGGTGAAGAACCCACCGGGCCAAGATGATCCCTTTTCTGAGGGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CAA 72 bp ACGCAATCGCAGGTGGGGAACTCGGCCTGGGCTCTCTaGGCAGGTGTGTCCAGCAGACTCTTGGTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: TQSQVGNSAWAL*AGVSSRLLVGV
Trigger: CACACCCACCAAGAGTCTGCTGGACACACCTGCCAAGAGAGCCCAGGCCGAGTTCCCCACCTGCGATTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 72 bp GGAGAAGGAGGCACCACAGGTGTTGGGGTCTTTGCCTaGGCAAGCGCAGGTCCGGTCATCGTTGAGGCCGCA +
Preference number: 6 (lower is better)
Translates to: GEGGTTGVGVFA*ASAGPVIVEAA
Trigger: TGCGGCCTCAACGATGACCGGACCTGCGCTTGCCAAGGCAAAGACCCCAACACCTGTGGTGCCTCCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp GTTCTGCGGCTCCACCTTGAGGGAGGGCTTCAGGCCTaGCTGGGACAATCCACCCTTCAGAGACAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: VLRLHLEGGLQA*LGQSTLQRQAW
Trigger: CCAGGCCTGTCTCTGAAGGGTGGATTGTCCCAGCAAGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 90 bp TCTTCTCCTTGGGTGGTCTGTCTGGAAGCCGTGGGACAGGTGAACTaGGTGGGGGCCACCAGCCAGGAGCAGAAGGCTCTGAAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: SSPWVVCLEAVGQVN*VGATSQEQKALKEQ
Trigger: CTGCTCCTTCAGAGCCTTCTGCTCCTGGCTGGTGGCCCCCACCAAGTTCACCTGTCCCACGGCTTCCAGACAGACCACCCAAGGAGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 90 bp ACCACACCGTTTCCGTTTCTTTCGACCATCTCCACCCCCTCGGAGTaGGGACTCACTCCCAGCCATGGAGAGCCCAGACCCCGGGAAGCT +
Preference number: 6 (lower is better)
Translates to: TTPFPFLSTISTPSE*GLTPSHGEPRPREA
Trigger: AGCTTCCCGGGGTCTGGGCTCTCCATGGCTGGGAGTGAGTCCCAACTCCGAGGGGGTGGAGATGGTCGAAAGAAACGGAAACGGTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 72 bp AGGGGCTGTGCTTCCCGGGGCCTGGACTTCTTGATCTaGATGGGCTTTCGGACACTGGGCTTGATCCCAGGG +
Preference number: 6 (lower is better)
Translates to: RGCASRGLDFLI*MGFRTLGLIPG
Trigger: CCCTGGGATCAAGCCCAGTGTCCGAAAGCCCATTCAGATCAAGAAGTCCAGGCCCCGGGAAGCACAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp GAGAAGGAGGCACCACAGGTGTTGGGGTCTTTGCCTTaGCAAGCGCAGGTCCGGTCATCGTTGAGGCCGCAT +
Preference number: 6 (lower is better)
Translates to: EKEAPQVLGSLP*QAQVRSSLRPH
Trigger: ATGCGGCCTCAACGATGACCGGACCTGCGCTTGCCAAGGCAAAGACCCCAACACCTGTGGTGCCTCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GAGGGGCCAGTCGCTTGTACAGGGGAGCGACTTCGGTaGCCAGGTCCTGGAAACTCTTCCGGAGCACTTCTT +
Preference number: 6 (lower is better)
Translates to: EGPVACTGERLR*PGPGNSSGALL
Trigger: AAGAAGTGCTCCGGAAGAGTTTCCAGGACCTGGCCACCGAAGTCGCTCCCCTGTACAAGCGACTGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GGCCGGGCTCAGGCTGTTGTGCAGAGCGTGGAGGTCTaGCTTCTTCTCAAAACTGCCACTGCTGCCACTGTG +
Preference number: 6 (lower is better)
Translates to: GRAQAVVQSVEV*LLLKTATAATV
Trigger: CACAGTGGCAGCAGTGGCAGTTTTGAGAAGAAGCCAGACCTCCACGCTCTGCACAACAGCCTGAGCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp TCTCCTCTGACTTCAGAGCCCCAAACAGCTTCTCGCTaGATCCCAGGGGCAGACCAAAGGACTGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: SPLTSEPQTASR*IPGADQRTARP
Trigger: GGGCCTGGCAGTCCTTTGGTCTGCCCCTGGGATCCAGCGAGAAGCTGTTTGGGGCTCTGAAGTCAGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp GTGAGCAGTTTCTCCTGGTATTTTTCCTCCAGGGTCTaGACGCTGGAGAAGGCAGTGCTGCCTGCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: VSSFSWYFSSRV*TLEKAVLPARR
Trigger: GCGGCGGGCAGGCAGCACTGCCTTCTCCAGCGTCCAGACCCTGGAGGAAAAATACCAGGAGAAACTGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CCA 72 bp GGACACCAGCAGCAGCCCTCAGAAAAGGGATCATCTTaGCCCGGTGGGTTCTTCACCCTCACCCACCCTGGA +
Preference number: 6 (lower is better)
Translates to: GHQQQPSEKGSS*PGGFFTLTHPG
Trigger: TCCAGGGTGGGTGAGGGTGAAGAACCCACCGGGCCAAGATGATCCCTTTTCTGAGGGCTGCTGCTGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CAA 72 bp AAGCCACTGAGGGTGGGTGTGAGTGGGTTCTCAGCCTaGGTGGGTGTGGCCTCCTGTCCTCCCTCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: KPLRVGVSGFSA*VGVASCPPSSE
Trigger: TTCAGAGGAGGGAGGACAGGAGGCCACACCCACCAAGGCTGAGAACCCACTCACACCCACCCTCAGTGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 72 bp AACACACCCCAGCTGCCACCCACACCGTTAGTCCTCTaGGGGGACATGCTTGGGCCTCCTGAGTACTGTCCC +
Preference number: 6 (lower is better)
Translates to: NTPQLPPTPLVL*GDMLGPPEYCP
Trigger: GGGACAGTACTCAGGAGGCCCAAGCATGTCCCCCAAGAGGACTAACGGTGTGGGTGGCAGCTGGGGTGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp AGGACACCAGCAGCAGCCCTCAGAAAAGGGATCATCTaGGCCCGGTGGGTTCTTCACCCTCACCCACCCTGG +
Preference number: 6 (lower is better)
Translates to: RTPAAALRKGII*ARWVLHPHPPW
Trigger: CCAGGGTGGGTGAGGGTGAAGAACCCACCGGGCCAAGATGATCCCTTTTCTGAGGGCTGCTGCTGGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CAA 90 bp CCCACGGGACCTCCAGCTGGTGTTGGGAGCTTCTTCTTCTTCTCCTaGGGTGGTCTGTCTGGAAGCCGTGGGACAGGTGAACTTGGTGGG +
Preference number: 6 (lower is better)
Translates to: PTGPPAGVGSFFFFS*GGLSGSRGTGELGG
Trigger: CCCACCAAGTTCACCTGTCCCACGGCTTCCAGACAGACCACCCAAGGAGAAGAAGAAGAAGCTCCCAACACCAGCTGGAGGTCCCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 90 bp TCCCAGGGGCAGCTTTCTCCGTTCCCACGGGACCTCCAGCTGGTGTaGGGAGCTTCTTCTTCTTCTCCTTGGGTGGTCTGTCTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: SQGQLSPFPRDLQLV*GASSSSPWVVCLEA
Trigger: GGCTTCCAGACAGACCACCCAAGGAGAAGAAGAAGAAGCTCCCAACACCAGCTGGAGGTCCCGTGGGAACGGAGAAAGCTGCCCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 90 bp TTCCACAGCTTGTCTTGGAACCCAGGACTACCTTTCAGGGCCGAGTaGAAATCCCCTGCCCCCAGCGCCCACGGCTTCTCAGTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: FHSLSWNPGLPFRAE*KSPAPSAHGFSVRL
Trigger: CAGCCTGACTGAGAAGCCGTGGGCGCTGGGGGCAGGGGATTTCAACTCGGCCCTGAAAGGTAGTCCTGGGTTCCAAGACAAGCTGTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp ACTCGAGGTAGTCAGGGCATTCTGGGCCATCGCAGTTaGAGTTGGGTGGTTTCATACCATGCCGCGCGAGGG +
Preference number: 6 (lower is better)
Translates to: TRGSQGILGHRS*SWVVSYHAARG
Trigger: CCCTCGCGCGGCATGGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCCTGACTACCTCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp CAGGACAATCTGTCGGACAGGTGGGAAGAGGGGCTGTaGTTCCCGGGGCCTGGACTTCTTGATCTGAATGGG +
Preference number: 6 (lower is better)
Translates to: QDNLSDRWEEGL*FPGPGLLDLNG
Trigger: CCCATTCAGATCAAGAAGTCCAGGCCCCGGGAAGCACAGCCCCTCTTCCCACCTGTCCGACAGATTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 72 bp CTTCCGGAGCACTTCTTCCTCTTTGGGATTGTCCCCTaGGAGGCGGAACTTGCGAGGTGTCTTGCTCCGAGC +
Preference number: 6 (lower is better)
Translates to: LPEHFFLFGIVP*EAELARCLAPS
Trigger: GCTCGGAGCAAGACACCTCGCAAGTTCCGCCTCGCAGGGGACAATCCCAAAGAGGAAGAAGTGCTCCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GGGGGAGAACATGCAGCTGCTCATCCTCGGGAATCTTaGCCACGCAGCGATTGTCTTCCTTGGTCAGGGTGC +
Preference number: 6 (lower is better)
Translates to: GGEHAAAHPRES*PRSDCLPWSGC
Trigger: GCACCCTGACCAAGGAAGACAATCGCTGCGTGGGCAAGATTCCCGAGGATGAGCAGCTGCATGTTCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GGCGGTGAGCACCTGGATGGCTCCGCTGCCCACCTTTaGATTCTGGTTCTCCTCGCTACCAAACTCATCCGT +
Preference number: 6 (lower is better)
Translates to: GGEHLDGSAAHL*ILVLLATKLIR
Trigger: ACGGATGAGTTTGGTAGCGAGGAGAACCAGAATGCAAAGGTGGGCAGCGGAGCCATCCAGGTGCTCACCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GTCCTCCATTCTGAGACACCTCGGACAGAGGTGTCTTaGCCATCTTGCCAGCGTCTCTGGGCACAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: VLHSETPRTEVS*PSCQRLWAQAQ
Trigger: CTGAGCCTGTGCCCAGAGACGCTGGCAAGATGGGCAAGACACCTCTGTCCGAGGTGTCTCAGAATGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GATGGATGCCTCTTCTCAACCCCTCTTCACCTCCTCTaGAGCAGTCTGATCGGACTCCGTAGGGGGCCACTC +
Preference number: 6 (lower is better)
Translates to: DGCLFSTPLHLL*SSLIGLRRGPL
Trigger: GAGTGGCCCCCTACGGAGTCCGATCAGACTGCTGCAGAGGAGGTGAAGAGGGGTTGAGAAGAGGCATCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS GCA 72 bp GGTCATAGGTGCTGGGGCAGAACCACAGTCGTTTCCTaGCACCTCCAAAGGCCACCAACAGGTCCTTCTCGC +
Preference number: 6 (lower is better)
Translates to: GHRCWGRTTVVS*HLQRPPTGPSR
Trigger: GCGAGAAGGACCTGTTGGTGGCCTTTGGAGGTGGCAGGAAACGACTGTGGTTCTGCCCCAGCACCTATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CCA 72 bp AGGGGCAGCTTTCTCCGTTCCCACGGGACCTCCAGCTaGTGTTGGGAGCTTCTTCTTCTTCTCCTTGGGTGG +
Preference number: 6 (lower is better)
Translates to: RGSFLRSHGTSS*CWELLLLLLGW
Trigger: CCACCCAAGGAGAAGAAGAAGAAGCTCCCAACACCAGCTGGAGGTCCCGTGGGAACGGAGAAAGCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 72 bp AGCTGCTCATCCTCGGGAATCTTGCCCACGCAGCGATaGTCTTCCTTGGTCAGGGTGCAGACCACGGTGCAC +
Preference number: 6 (lower is better)
Translates to: SCSSSGILPTQR*SSLVRVQTTVH
Trigger: GTGCACCGTGGTCTGCACCCTGACCAAGGAAGACAATCGCTGCGTGGGCAAGATTCCCGAGGATGAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp TTTCCGTTTCTTTCGACCATCTCCACCCCCTCGGAGTaGGGACTCACTCCCAGCCATGGAGAGCCCAGACCC +
Preference number: 6 (lower is better)
Translates to: FPFLSTISTPSE*GLTPSHGEPRP
Trigger: GGGTCTGGGCTCTCCATGGCTGGGAGTGAGTCCCAACTCCGAGGGGGTGGAGATGGTCGAAAGAAACGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CAA 90 bp GTCTCTGGGCACAGGCTCAGCCTGGGTCAGCGGGTCTACTGGCTCTaGCTTGATGGATCTGTTGTAGCAGTTGGAGCTCTGGGCAAAGGG +
Preference number: 6 (lower is better)
Translates to: VSGHRLSLGQRVYWL*LDGSVVAVGALGKG
Trigger: CCCTTTGCCCAGAGCTCCAACTGCTACAACAGATCCATCAAGCAAGAGCCAGTAGACCCGCTGACCCAGGCTGAGCCTGTGCCCAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 90 bp CTATCTCCAAATTCAGCCTCAAACTGCCGGATGAGCTCTTCCAGCTaGTCATCGGCAGGGGGAAGAGGGCCAGTGGAGCCTGGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: LSPNSASNCRMSSSS*SSAGGRGPVEPGCK
Trigger: CTTGCAGCCAGGCTCCACTGGCCCTCTTCCCCCTGCCGATGACAAGCTGGAAGAGCTCATCCGGCAGTTTGAGGCTGAATTTGGAGATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 90 bp GGGAACTCGGCCTGGGCTCTCTTGGCAGGTGTGTCCAGCAGACTCTaGGTGGGTGTGTCCAGGTACTTAAGAGGTGACTCCAAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: GNSAWALLAGVSSRL*VGVSRYLRGDSKKP
Trigger: TGGCTTCTTGGAGTCACCTCTTAAGTACCTGGACACACCCACCAAGAGTCTGCTGGACACACCTGCCAAGAGAGCCCAGGCCGAGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 90 bp TTGCCGCTGTACTTGAAGGAGCTGAAGTGGTTCTGCGGCTCCACCTaGAGGGAGGGCTTCAGGCCTTGCTGGGACAATCCACCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: LPLYLKELKWFCGST*REGFRPCWDNPPFR
Trigger: TCTGAAGGGTGGATTGTCCCAGCAAGGCCTGAAGCCCTCCCTCAAGGTGGAGCCGCAGAACCACTTCAGCTCCTTCAAGTACAGCGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS TCA 72 bp GGGCTTGGTAGGCAGGGCCTCAGGCCGCTTGAATACTaGCTGGATGTAATCACTGGCGCTGCCCAACAACTG +
Preference number: 6 (lower is better)
Translates to: GLGRQGLRPLEY*LDVITGAAQQL
Trigger: CAGTTGTTGGGCAGCGCCAGTGATTACATCCAGTCAGTATTCAAGCGGCCTGAGGCCCTGCCTACCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 72 bp CTTCCTCTTTGGGATTGTCCCCTGCGAGGCGGAACTTaGGAGGTGTCTTGCTCCGAGCATACTTGCAGCCGT +
Preference number: 6 (lower is better)
Translates to: LPLWDCPLRGGT*EVSCSEHTCSR
Trigger: ACGGCTGCAAGTATGCTCGGAGCAAGACACCTCGCAAGTTCCGCCTCGCAGGGGACAATCCCAAAGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GTGCATAGTAGGAGTGGTAGGAGTACACGCTGTTCATaGTGTAAGGGTCGGAGGGCCGGCAGTTGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: VHSRSGRSTRCS*CKGRRAGSCPA
Trigger: TGCTGGGCAACTGCCGGCCCTCCGACCCTTACAGCATGAACAGCGTGTACTCCTACCACTCCTACTATGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp CTTCCCCTCCAGCCACTCGAGGTAGTCAGGGCATTCTaGGCCATCGCAGTTGCAGTTGGGTGGTTTCATACC +
Preference number: 6 (lower is better)
Translates to: LPLQPLEVVRAF*AIAVAVGWFHT
Trigger: GGTATGAAACCACCCAACTGCAACTGCGATGGCCCAGAATGCCCTGACTACCTCGAGTGGCTGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp CGCTTGTACAGGGGAGCGACTTCGGTGGCCAGGTCCTaGAAACTCTTCCGGAGCACTTCTTCCTCTTTGGGA +
Preference number: 6 (lower is better)
Translates to: RLYRGATSVARS*KLFRSTSSSLG
Trigger: TCCCAAAGAGGAAGAAGTGCTCCGGAAGAGTTTCCAGGACCTGGCCACCGAAGTCGCTCCCCTGTACAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp CCTCGGGAATCTTGCCCACGCAGCGATTGTCTTCCTTaGTCAGGGTGCAGACCACGGTGCACCCATTGTAGA +
Preference number: 6 (lower is better)
Translates to: PRESCPRSDCLP*SGCRPRCTHCR
Trigger: TCTACAATGGGTGCACCGTGGTCTGCACCCTGACCAAGGAAGACAATCGCTGCGTGGGCAAGATTCCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp AGCACCTGGATGGCTCCGCTGCCCACCTTTGCATTCTaGTTCTCCTCGCTACCAAACTCATCCGTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: STWMAPLPTFAF*FSSLPNSSVLA
Trigger: GGCCAACACGGATGAGTTTGGTAGCGAGGAGAACCAGAATGCAAAGGTGGGCAGCGGAGCCATCCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp AATTCAGCCTCAAACTGCCGGATGAGCTCTTCCAGCTaGTCATCGGCAGGGGGAAGAGGGCCAGTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: NSASNCRMSSSS*SSAGGRGPVEP
Trigger: AGGCTCCACTGGCCCTCTTCCCCCTGCCGATGACAAGCTGGAAGAGCTCATCCGGCAGTTTGAGGCTGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 72 bp TCTTCCTCTTTGGGATTGTCCCCTGCGAGGCGGAACTaGCGAGGTGTCTTGCTCCGAGCATACTTGCAGCCG +
Preference number: 6 (lower is better)
Translates to: SSSLGLSPARRN*RGVLLRAYLQP
Trigger: CGGCTGCAAGTATGCTCGGAGCAAGACACCTCGCAAGTTCCGCCTCGCAGGGGACAATCCCAAAGAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp AGGGGGAGAACATGCAGCTGCTCATCCTCGGGAATCTaGCCCACGCAGCGATTGTCTTCCTTGGTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: RGRTCSCSSSGI*PTQRLSSLVRV
Trigger: CACCCTGACCAAGGAAGACAATCGCTGCGTGGGCAAGATTCCCGAGGATGAGCAGCTGCATGTTCTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 90 bp CGGAGCACTTCTTCCTCTTTGGGATTGTCCCCTGCGAGGCGGAACTaGCGAGGTGTCTTGCTCCGAGCATACTTGCAGCCGTTGAAGTAC +
Preference number: 6 (lower is better)
Translates to: RSTSSSLGLSPARRN*RGVLLRAYLQPLKY
Trigger: GTACTTCAACGGCTGCAAGTATGCTCGGAGCAAGACACCTCGCAAGTTCCGCCTCGCAGGGGACAATCCCAAAGAGGAAGAAGTGCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 90 bp ACCCTGCTGGCACTTGGAATTCTTTGCCTGTTCATCACAGCTTATTaGTCACTGCCCCCGCCCTCCACCCCACTGGCTCCGTGTCCCATT +
Preference number: 6 (lower is better)
Translates to: TLLALGILCLFITAY*SLPPPSTPLAPCPI
Trigger: AATGGGACACGGAGCCAGTGGGGTGGAGGGCGGGGGCAGTGACAAATAAGCTGTGATGAACAGGCAAAGAATTCCAAGTGCCAGCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS TCA 72 bp ACCGTTAGTCCTCTTGGGGGACATGCTTGGGCCTCCTaGGTACTGTCCCCAAAGGTGACTGGGTCCTCCATT +
Preference number: 6 (lower is better)
Translates to: TVSPLGGHAWAS*VLSPKVTGSSI
Trigger: AATGGAGGACCCAGTCACCTTTGGGGACAGTACTCAGGAGGCCCAAGCATGTCCCCCAAGAGGACTAACGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS GCA 72 bp GTGTTGGCCATCTTGTACAGGGGGAGAACATGCAGCTaGTCATCCTCGGGAATCTTGCCCACGCAGCGATTG +
Preference number: 6 (lower is better)
Translates to: VLAILYRGRTCS*SSSGILPTQRL
Trigger: CAATCGCTGCGTGGGCAAGATTCCCGAGGATGAGCAGCTGCATGTTCTCCCCCTGTACAAGATGGCCAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp AGCTTTCTCCGTTCCCACGGGACCTCCAGCTGGTGTTaGGAGCTTCTTCTTCTTCTCCTTGGGTGGTCTGTC +
Preference number: 6 (lower is better)
Translates to: SFLRSHGTSSWC*ELLLLLLGWSV
Trigger: GACAGACCACCCAAGGAGAAGAAGAAGAAGCTCCCAACACCAGCTGGAGGTCCCGTGGGAACGGAGAAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp TCTGGGCACAGGCTCAGCCTGGGTCAGCGGGTCTACTaGCTCTTGCTTGATGGATCTGTTGTAGCAGTTGGA +
Preference number: 6 (lower is better)
Translates to: SGHRLSLGQRVY*LLLDGSVVAVG
Trigger: TCCAACTGCTACAACAGATCCATCAAGCAAGAGCCAGTAGACCCGCTGACCCAGGCTGAGCCTGTGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp CAGCTTTCTCCGTTCCCACGGGACCTCCAGCTGGTGTaGGGAGCTTCTTCTTCTTCTCCTTGGGTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: QLSPFPRDLQLV*GASSSSPWVVC
Trigger: ACAGACCACCCAAGGAGAAGAAGAAGAAGCTCCCAACACCAGCTGGAGGTCCCGTGGGAACGGAGAAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CAA 72 bp GGATTGTCCCCTGCGAGGCGGAACTTGCGAGGTGTCTaGCTCCGAGCATACTTGCAGCCGTTGAAGTACATG +
Preference number: 6 (lower is better)
Translates to: GLSPARRNLRGV*LRAYLQPLKYM
Trigger: CATGTACTTCAACGGCTGCAAGTATGCTCGGAGCAAGACACCTCGCAAGTTCCGCCTCGCAGGGGACAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp CACAGGCTCAGCCTGGGTCAGCGGGTCTACTGGCTCTaGCTTGATGGATCTGTTGTAGCAGTTGGAGCTCTG +
Preference number: 6 (lower is better)
Translates to: HRLSLGQRVYWL*LDGSVVAVGAL
Trigger: CAGAGCTCCAACTGCTACAACAGATCCATCAAGCAAGAGCCAGTAGACCCGCTGACCCAGGCTGAGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CAA 72 bp GCACTTGGAATTCTTTGCCTGTTCATCACAGCTTATTaGTCACTGCCCCCGCCCTCCACCCCACTGGCTCCG +
Preference number: 6 (lower is better)
Translates to: ALGILCLFITAY*SLPPPSTPLAP
Trigger: CGGAGCCAGTGGGGTGGAGGGCGGGGGCAGTGACAAATAAGCTGTGATGAACAGGCAAAGAATTCCAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS CAA 90 bp TGGAATCCTGCCCTCCTCTCCTTTCATGGGGTTCCACAGCTTGTCTaGGAACCCAGGACTACCTTTCAGGGCCGAGTTGAAATCCCCTGC +
Preference number: 6 (lower is better)
Translates to: WNPALLSFHGVPQLV*EPRTTFQGRVEIPC
Trigger: GCAGGGGATTTCAACTCGGCCCTGAAAGGTAGTCCTGGGTTCCAAGACAAGCTGTGGAACCCCATGAAAGGAGAGGAGGGCAGGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS TCA 72 bp CAGACTCTTGGTGGGTGTGTCCAGGTACTTAAGAGGTaGCTCCAAGAAGCCACTGAGGGTGGGTGTGAGTGG +
Preference number: 6 (lower is better)
Translates to: QTLGGCVQVLKR*LQEATEGGCEW
Trigger: CCACTCACACCCACCCTCAGTGGCTTCTTGGAGTCACCTCTTAAGTACCTGGACACACCCACCAAGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS GCA 72 bp GGAGTGGAAGCCATTGACGGAGGTCAGGCTGGGCTGTaGATAGTAGGAGTGGTAGGAGTACACGCTGTTCAT +
Preference number: 6 (lower is better)
Translates to: GVEAIDGGQAGL*IVGVVGVHAVH
Trigger: ATGAACAGCGTGTACTCCTACCACTCCTACTATGCACAGCCCAGCCTGACCTCCGTCAATGGCTTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp CATCTTTCTCCACTATTTGTTCGACGCAATCGCAGGTaGGGAACTCGGCCTGGGCTCTCTTGGCAGGTGTGT +
Preference number: 6 (lower is better)
Translates to: HLSPLFVRRNRR*GTRPGLSWQVC
Trigger: ACACACCTGCCAAGAGAGCCCAGGCCGAGTTCCCCACCTGCGATTGCGTCGAACAAATAGTGGAGAAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS CCA 72 bp GCTGGTCCACTGAGCAGCAAGGTGGAAGTGAGGCTGTaGAACATACAGGTGTCTCAGGACTCAGGTGAGCAA +
Preference number: 6 (lower is better)
Translates to: AGPLSSKVEVRL*NIQVSQDSGEQ
Trigger: TTGCTCACCTGAGTCCTGAGACACCTGTATGTTCCACAGCCTCACTTCCACCTTGCTGCTCAGTGGACCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS CAA 72 bp GCCCTCCTCTCCTTTCATGGGGTTCCACAGCTTGTCTaGGAACCCAGGACTACCTTTCAGGGCCGAGTTGAA +
Preference number: 6 (lower is better)
Translates to: ALLSFHGVPQLV*EPRTTFQGRVE
Trigger: TTCAACTCGGCCCTGAAAGGTAGTCCTGGGTTCCAAGACAAGCTGTGGAACCCCATGAAAGGAGAGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305799.8
ENST00000409262.8
CDS CCA 72 bp TACAAGGGTGAAGGCAAGTGGCTTCAGTCTCGTGGATaGATGCCTCTTCTCAACCCCTCTTCACCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: YKGEGKWLQSRG*MPLLNPSSPPL
Trigger: CAGAGGAGGTGAAGAGGGGTTGAGAAGAGGCATCCATCCACGAGACTGAAGCCACTTGCCTTCACCCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CCA 72 bp CCTTGTCTCCCCGGCTTAGAGGGTCAGGAAATGGGTTaGGTCATCCTCTTTACCCTGCTGGCACTTGGAATT +
Preference number: 6 (lower is better)
Translates to: PCLPGLEGQEMG*VILFTLLALGI
Trigger: AATTCCAAGTGCCAGCAGGGTAAAGAGGATGACCCAACCCATTTCCTGACCCTCTAAGCCGGGGAGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS CAA 72 bp TCCTTGTCTCCCCGGCTTAGAGGGTCAGGAAATGGGTaGGGTCATCCTCTTTACCCTGCTGGCACTTGGAAT +
Preference number: 6 (lower is better)
Translates to: SLSPRLRGSGNG*GHPLYPAGTWN
Trigger: ATTCCAAGTGCCAGCAGGGTAAAGAGGATGACCCAACCCATTTCCTGACCCTCTAAGCCGGGGAGACAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS CAA 90 bp CTCAAGAGGTCCTTGTCTCCCCGGCTTAGAGGGTCAGGAAATGGGTaGGGTCATCCTCTTTACCCTGCTGGCACTTGGAATTCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: LKRSLSPRLRGSGNG*GHPLYPAGTWNSLP
Trigger: AGGCAAAGAATTCCAAGTGCCAGCAGGGTAAAGAGGATGACCCAACCCATTTCCTGACCCTCTAAGCCGGGGAGACAAGGACCTCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS TCA 72 bp CAAAGCTATCTCCAAATTCAGCCTCAAACTGCCGGATaGGCTCTTCCAGCTTGTCATCGGCAGGGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: QSYLQIQPQTAG*ALPACHRQGEE
Trigger: CTCTTCCCCCTGCCGATGACAAGCTGGAAGAGCTCATCCGGCAGTTTGAGGCTGAATTTGGAGATAGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305799.8
ENST00000409262.8
ENST00000475405.2
CDS TCA 72 bp TCCTTCTCGCCTAGAACAGTCAAGAGTCTACAAGGGTaGAGGCAAGTGGCTTCAGTCTCGTGGATGGATGCC +
Preference number: 6 (lower is better)
Translates to: SFSPRTVKSLQG*RQVASVSWMDA
Trigger: GGCATCCATCCACGAGACTGAAGCCACTTGCCTTCACCCTTGTAGACTCTTGACTGTTCTAGGCGAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS CAA 90 bp AGGGTCAGGAAATGGGTTGGGTCATCCTCTTTACCCTGCTGGCACTaGGAATTCTTTGCCTGTTCATCACAGCTTATTTGTCACTGCCCC +
Preference number: 6 (lower is better)
Translates to: RVRKWVGSSSLPCWH*EFFACSSQLICHCP
Trigger: GGGGCAGTGACAAATAAGCTGTGATGAACAGGCAAAGAATTCCAAGTGCCAGCAGGGTAAAGAGGATGACCCAACCCATTTCCTGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS CAA 90 bp TGCCAGAAGAACAAGCAGAAACATGCAGTAAATCTCAAGAGGTCCTaGTCTCCCCGGCTTAGAGGGTCAGGAAATGGGTTGGGTCATCCT +
Preference number: 6 (lower is better)
Translates to: CQKNKQKHAVNLKRS*SPRLRGSGNGLGHP
Trigger: AGGATGACCCAACCCATTTCCTGACCCTCTAAGCCGGGGAGACAAGGACCTCTTGAGATTTACTGCATGTTTCTGCTTGTTCTTCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS GCA 72 bp AGGGTCAGGAAATGGGTTGGGTCATCCTCTTTACCCTaGTGGCACTTGGAATTCTTTGCCTGTTCATCACAG +
Preference number: 6 (lower is better)
Translates to: RVRKWVGSSSLP*WHLEFFACSSQ
Trigger: CTGTGATGAACAGGCAAAGAATTCCAAGTGCCAGCAGGGTAAAGAGGATGACCCAACCCATTTCCTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS CCA 72 bp CTAGAACAGTCAAGAGTCTACAAGGGTGAAGGCAAGTaGCTTCAGTCTCGTGGATGGATGCCTCTTCTCAAC +
Preference number: 6 (lower is better)
Translates to: LEQSRVYKGEGK*LQSRGWMPLLN
Trigger: GTTGAGAAGAGGCATCCATCCACGAGACTGAAGCCACTTGCCTTCACCCTTGTAGACTCTTGACTGTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409262.8
CDS TCA 72 bp GAAGCAGGGGGACATGAATTGGGCAGACCTACAGAATaGAAGAAACCCAGAAACAATGGAAGTGAGGATCCC +
Preference number: 6 (lower is better)
Translates to: EAGGHELGRPTE*KKPRNNGSEDP
Trigger: GGGATCCTCACTTCCATTGTTTCTGGGTTTCTTTCATTCTGTAGGTCTGCCCAATTCATGTCCCCCTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475405.2
CDS CAA 72 bp AACAAGCAGAAACATGCAGTAAATCTCAAGAGGTCCTaGTCTCCCCGGCTTAGAGGGTCAGGAAATGGGTTG +
Preference number: 6 (lower is better)
Translates to: NKQKHAVNLKRS*SPRLRGSGNGL
Trigger: CAACCCATTTCCTGACCCTCTAAGCCGGGGAGACAAGGACCTCTTGAGATTTACTGCATGTTTCTGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496886.1
CDS CCA 72 bp TATCCGTATTCCATTAACAGCACATCCATTTCTCCTTaGACATCTGTGTATCACTCACCGCTCCTCCATGAG +
Preference number: 6 (lower is better)
Translates to: YPYSINSTSISP*TSVYHSPLLHE
Trigger: CTCATGGAGGAGCGGTGAGTGATACACAGATGTCCAAGGAGAAATGGATGTGCTGTTAATGGAATACGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475405.2
CDS TCA 72 bp ACCTACAGAATGAAAGAAACCCAGAAACAATGGAAGTaGGGATCCCACAGTAAACCTTCCCTAAGCCCGTTA +
Preference number: 6 (lower is better)
Translates to: TYRMKETQKQWK*GSHSKPSLSPL
Trigger: TAACGGGCTTAGGGAAGGTTTACTGTGGGATCCTCACTTCCATTGTTTCTGGGTTTCTTTCATTCTGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475405.2
CDS CAA 72 bp AAATGGGTTGGGTCATCCTCTTTACCCTGCTGGCACTaGGAATTCTTTGCCTGTTCATCACAGCTTATTTGT +
Preference number: 6 (lower is better)
Translates to: KWVGSSSLPCWH*EFFACSSQLIC
Trigger: ACAAATAAGCTGTGATGAACAGGCAAAGAATTCCAAGTGCCAGCAGGGTAAAGAGGATGACCCAACCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496886.1