RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TET2 (Homo sapiens)

Ensembl gene IDs: ENSG00000168769

Ensembl transcript IDs: ENST00000265149.9, ENST00000305737.6, ENST00000380013.9, ENST00000413648.2, ENST00000504042.5, ENST00000505801.1, ENST00000513237.5, ENST00000514870.1, ENST00000540549.5

Found 1830 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCTGTTCATaGCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCC +
Preference number: 1 (lower is better)
Translates to: ASTLWLAAWLADSCS*LGFLASIAKWAACA
Trigger: GGCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CCA 90 bp GGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTaGCTGGCCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATC +
Preference number: 1 (lower is better)
Translates to: GPLVGACASTLWLAA*LADSCSCLGFLASI
Trigger: GATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR TCA 90 bp GGCCACTCCCCCAATGTCAGGATCCAGAAAGCTCTGCTCGCTGTCTaGCCAGACCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTG +
Preference number: 1 (lower is better)
Translates to: GHSPNVRIQKALLAV*PDLIVVLCTRSHTL
Trigger: CAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGGTCTGGTCAGACAGCGAGCAGAGCTTTCTGGATCCTGACATTGGGGGAGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR GCA 90 bp ATTATCAGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTaGCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCTGTTC +
Preference number: 1 (lower is better)
Translates to: IIRWESQSGTSRWSL*QYLVAGSLAGRFLF
Trigger: GAACAGGAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCTGATAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CCA 90 bp CTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTaGCCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAA +
Preference number: 1 (lower is better)
Translates to: LSLEPVPVPCGWQPG*PIPVHAWVFWHPSQ
Trigger: TTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CCA 90 bp TCCAGAAGCAGAATAAGAGTTGACAGACTCTGTCTGAGGGTGATGTaGCTGCTGCTGCTGGGGTCTCTGCTGCTGCTGGGGCTGTGGTGG +
Preference number: 1 (lower is better)
Translates to: SRSRIRVDRLCLRVM*LLLLGSLLLLGLWW
Trigger: CCACCACAGCCCCAGCAGCAGCAGAGACCCCAGCAGCAGCAGCCACATCACCCTCAGACAGAGTCTGTCAACTCTTATTCTGCTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 90 bp CAAAGAGGGACAGTAGGAGTCCTCCCTCCATCCTTCTACACAGTGTaGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGGTAGGTCA +
Preference number: 1 (lower is better)
Translates to: QRGTVGVLPPSFYTV*GISLQEGKHGTGRS
Trigger: TGACCTACCCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATGGAGGGAGGACTCCTACTGTCCCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CCA 90 bp AGTCTTTCTGCTTTGACACTTTATTATCAGGTGGGAAAGCCAGAGTaGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAG +
Preference number: 1 (lower is better)
Translates to: SLSALTLYYQVGKPE*DLSLEPVPVPCGWQ
Trigger: CTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCTGATAATAAAGTGTCAAAGCAGAAAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CCA 90 bp TCATATATATCTGTTGTAAGGCCCTGTGACCCGAGTGAAGGCATATaGAGATGTAGTTACTGTGGAGTCTGTGGTCACGGACATGGTCCT +
Preference number: 1 (lower is better)
Translates to: SYISVVRPCDPSEGI*RCSYCGVCGHGHGP
Trigger: AGGACCATGTCCGTGACCACAGACTCCACAGTAACTACATCTCCATATGCCTTCACTCGGGTCACAGGGCCTTACAACAGATATATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR TCA 90 bp TGTCATTCTCCTTGTTTTGGAGATGCAGGGCATGAAGAGAGCTGTTaGACATGCCCGGAGCTGCACTGTAGTTATGGATTATGTGAGAAG +
Preference number: 1 (lower is better)
Translates to: CHSPCFGDAGHEESC*TCPELHCSYGLCEK
Trigger: CTTCTCACATAATCCATAACTACAGTGCAGCTCCGGGCATGTTCAACAGCTCTCTTCATGCCCTGCATCTCCAAAACAAGGAGAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR GCA 90 bp GTTTTTCCCACCACATTTGTCATGAATACTGTGACCTTTCCCCACTaGCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTC +
Preference number: 1 (lower is better)
Translates to: VFPTTFVMNTVTFPH*PRHENYTTDRLVVV
Trigger: GACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAAAGGTCACAGTATTCATGACAAATGTGGTGGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR TCA 90 bp TCCAGTGAACACATGAAAGGTAAGAAAGCAAAACGGCCTTATTGCTaGTATGGAGAGCGCTTTAGTGGTCTGGATAGAAGATCACGTCAG +
Preference number: 1 (lower is better)
Translates to: SSEHMKGKKAKRPYC*YGERFSGLDRRSRQ
Trigger: CTGACGTGATCTTCTATCCAGACCACTAAAGCGCTCTCCATATCAGCAATAAGGCCGTTTTGCTTTCTTACCTTTCATGTGTTCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CCA 90 bp TTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTaGGATCTTGCTTCTGGCAAACTTACATCCATTGTAGTACATGCT +
Preference number: 1 (lower is better)
Translates to: FLFLFWVIPKQLKLP*DLASGKLTSIVVHA
Trigger: AGCATGTACTACAATGGATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR TCA 90 bp GAACATGCCCGGAGCTGCACTGTAGTTATGGATTATGTGAGAAGGTaGATGATGTTCACCATTTTTATAGTCCATGTTTGGATTGCTCAG +
Preference number: 1 (lower is better)
Translates to: EHARSCTVVMDYVRR*MMFTIFIVHVWIAQ
Trigger: CTGAGCAATCCAAACATGGACTATAAAAATGGTGAACATCATTCACCTTCTCACATAATCCATAACTACAGTGCAGCTCCGGGCATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR GCA 90 bp ACTTCATTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTaGCAAACTCCTGCCTTACAATTTTTCCCTTTATCAACTCAGTGC +
Preference number: 1 (lower is better)
Translates to: TSFRELQVSLWPTAT*QTPALQFFPLSTQC
Trigger: GCACTGAGTTGATAAAGGGAAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAATGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR CCA 90 bp CTCATGAGTGGGATAAGGAGGCAATTTCCCTACATGATGTACATTTaGTCTAATGGTACAACTGCTGAAACCATCTCCCTGCATATTTTG +
Preference number: 1 (lower is better)
Translates to: LMSGIRRQFPYMMYI*SNGTTAETISLHIL
Trigger: CAAAATATGCAGGGAGATGGTTTCAGCAGTTGTACCATTAGACCAAATGTACATCATGTAGGGAAATTGCCTCCTTATCCCACTCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 90 bp TCACTTAATTTGTGTAAGCCTCCTTGGACACAAGCAGTTCTATCATaGTTAAGAGCTGGAAGCATCTTTGATAACCCATTAGCTGTGTGG +
Preference number: 1 (lower is better)
Translates to: SLNLCKPPWTQAVLS*LRAGSIFDNPLAVW
Trigger: CCACACAGCTAATGGGTTATCAAAGATGCTTCCAGCTCTTAACCATGATAGAACTGCTTGTGTCCAAGGAGGCTTACACAAATTAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 90 bp TCAAAATATTACTGCTCAAGGCACCTAGTCACCCAAGAGCTCCGATaGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGTTAATACAA +
Preference number: 1 (lower is better)
Translates to: SKYYCSRHLVTQELR*RCTRLMLFSCLLIQ
Trigger: TTGTATTAACAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGACTAGGTGCCTTGAGCAGTAATATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR GCA 90 bp AAATCAATTGATACAGCACTTCACTGTTGTCTTATTTTAAGAAATTaGCACACACACAGCCATCCCAGCAACCTTCAGCAACTACCACCA +
Preference number: 1 (lower is better)
Translates to: KSIDTALHCCLILRN*HTHSHPSNLQQLPP
Trigger: TGGTGGTAGTTGCTGAAGGTTGCTGGGATGGCTGTGTGTGTGGCAATTTCTTAAAATAAGACAACAGTGAAGTGCTGTATCAATTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR GCA 90 bp CACATGGAACTAACCCTGTTTATTCATCTTATGCAGGCATCAGTCTaGTCAATCCTCTTGTTAAAGAGGACACTTAAGCTAAGAAATGAC +
Preference number: 1 (lower is better)
Translates to: HMELTLFIHLMQASV*SILLLKRTLKLRND
Trigger: GTCATTTCTTAGCTTAAGTGTCCTCTTTAACAAGAGGATTGAGCAGACTGATGCCTGCATAAGATGAATAAACAGGGTTAGTTCCATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR CCA 90 bp GAGAATGAGGAAGCTGCAGAAGAGAAGTTGGAAGCTAGCAGAAGTTaGTTTATAAAGTTTAAGAAGCGCAGCTGTCTCTATAACATAAAA +
Preference number: 1 (lower is better)
Translates to: ENEEAAEEKLEASRS*FIKFKKRSCLYNIK
Trigger: TTTTATGTTATAGAGACAGCTGCGCTTCTTAAACTTTATAAACCAACTTCTGCTAGCTTCCAACTTCTCTTCTGCAGCTTCCTCATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR GCA 90 bp AATCTGATTATTATATGCATCAGGTGCAAGTTTCTTATATGTTGGTaGCATAAGAGTGGACAGGTTTTGCAAATGAGACTCCAGTTTCTC +
Preference number: 1 (lower is better)
Translates to: NLIIICIRCKFLICW*HKSGQVLQMRLQFL
Trigger: GAGAAACTGGAGTCTCATTTGCAAAACCTGTCCACTCTTATGGCACCAACATATAAGAAACTTGCACCTGATGCATATAATAATCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR TCA 90 bp ACTAGCTTCAGAAGTGAACTGTACATCACTGTGCGTCAATCAAGATaGAAAATTCATTCAAGTAAAGTTGACACCACTCAGAAGCATTTT +
Preference number: 1 (lower is better)
Translates to: TSFRSELYITVRQSR*KIHSSKVDTTQKHF
Trigger: AAAATGCTTCTGAGTGGTGTCAACTTTACTTGAATGAATTTTTCATCTTGATTGACGCACAGTGATGTACAGTTCACTTCTGAAGCTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR TCA 90 bp AATGTAAAGGAAAAATTCTTGAAGGAAATTACTCCAGTGAACACATaGAAGGTAAGAAAGCAAAACGGCCTTATTGCTGATATGGAGAGC +
Preference number: 1 (lower is better)
Translates to: NVKEKFLKEITPVNT*KVRKQNGLIADMES
Trigger: GCTCTCCATATCAGCAATAAGGCCGTTTTGCTTTCTTACCTTTCATGTGTTCACTGGAGTAATTTCCTTCAAGAATTTTTCCTTTACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CCA 90 bp TTCAATCTGATTATTATATGCATCAGGTGCAAGTTTCTTATATGTTaGTGCCATAAGAGTGGACAGGTTTTGCAAATGAGACTCCAGTTT +
Preference number: 1 (lower is better)
Translates to: FNLIIICIRCKFLIC*CHKSGQVLQMRLQF
Trigger: AAACTGGAGTCTCATTTGCAAAACCTGTCCACTCTTATGGCACCAACATATAAGAAACTTGCACCTGATGCATATAATAATCAGATTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTGCTGCTGGGGTCTCTaGTGCTGCTGGGGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMACCWGL*CCWGCG
Trigger: ACCACAGCCCCAGCAGCAGCAGAGACCCCAGCAGCA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTAGTCCAAACATGCAGTaGCCCCTGAGAATGGACGGC +
Preference number: 2 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMASPNMQ*PLRMDG
Trigger: GCCGTCCATTCTCAGGGGTCACTGCATGTTTGGACT...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCGGGCCGTCTCATGTATaGATTGGTGGATCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPGPSHV*IGGSRS
Trigger: GCTTCTGGATCCACCAATCCATACATGAGACGGCCC...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCACCCAGACGGCACTCTaGTGCTCTGTGTTCATATTC +
Preference number: 2 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPTQTAL*CSVFIF
Trigger: GAATATGAACACAGAGCACCAGAGTGCCGTCTGGGT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTAACCCATTAGCTGTGTaGGAAAGCATGTCATTCTCC +
Preference number: 2 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMANPLAV*ESMSFS
Trigger: GGAGAATGACATGCTTTCCCACACAGCTAATGGGTT...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR TCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGACACACCGGCGATTGGTaGGCGTGCCGTATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGHTGDW*ACRISS
Trigger: TGAGGAAATACGGCACGCTCACCAATCGCCGGTGTG...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR TCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGAAAGCCAAGACAGGCTaGAAGCTAGGCCTTGCATGC +
Preference number: 2 (lower is better)
Translates to: HPSTQCGVSHCKRENMARKAKTG*KLGLAC
Trigger: GCATGCAAGGCCTAGCTTTCAGCCTGTCTTGGCTTT...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR GCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTAGTCCATGTTTGGATTaGTCAGATTGGGTGGTAATC +
Preference number: 2 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMASPCLD*SDWVVI
Trigger: GATTACCACCCAATCTGAGCAATCCAAACATGGACT...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTTAGACAGAGGGTCTTaGCTTGGATACCTATACAGA +
Preference number: 2 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMALDRGS*LGYLYR
Trigger: TCTGTATAGGTATCCAAGCCAAGACCCTCTGTCTAA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTGGCAATTTCCCTACATaGTGTACATTTGGTCTAATG +
Preference number: 2 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAGNFPT*CTFGLM
Trigger: CATTAGACCAAATGTACATCATGTAGGGAAATTGCC...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCGAGTGCATACCAATGTaGTGCCATTCTGCATGTTGT +
Preference number: 2 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPECIPM*CHSACC
Trigger: ACAACATGCAGAATGGCAGCACATTGGTATGCACTC...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAGGCTGCTGGGACTGCTaGATGACTGGTCCTGAAAGT +
Preference number: 2 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGGCWDC*MTGPES
Trigger: ACTTTCAGGACCAGTCATGCAGCAGTCCCAGCAGCC...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCCAGAGGGTCTTGGCTTaGATACCTATACAGATCCAT +
Preference number: 2 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPQRVLA*IPIQIH
Trigger: ATGGATCTGTATAGGTATCCAAGCCAAGACCCTCTG...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCGAGGGAGATCCTGGTaGGGTGATTCCTATTGGGAT +
Preference number: 2 (lower is better)
Translates to: FRELQVSLWPTATCQTPARGRSW*GDSYWD
Trigger: ATCCCAATAGGAATCACCCCACCAGGATCTCCCTCG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTCCATTGCATTGATATaGTGGATATTGGGTATTCTG +
Preference number: 2 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMASIALI*WILGIL
Trigger: CAGAATACCCAATATCCATCATATCAATGCAATGGA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGTGGGAAAGCCAGAGTaGGACCTCTCGTTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLVGKPE*DLSLEP
Trigger: AGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCAC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CAA 90 bp TCAGCTGCAGCTTTCTTGGCTTCTAGTTTCCTTTGTCGGCAAGTCTaGACTGGCTCTGCTAACATCCTGACTTTTCGCCGAAAAGAACTC +
Preference number: 2 (lower is better)
Translates to: SAAAFLASSFLCRQV*TGSANILTFRRKEL
Trigger: GAGTTCTTTTCGGCGAAAAGTCAGGATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAAGGAAACTAGAAGCCAAGAAAGCTGCAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCTCTCGTTGGAGCCTGTaGCAGTACCTTGTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSSRWSL*QYLVAG
Trigger: GCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCTCATGTATGGATTGGTaGATCCAGAAGCAGAATAAG +
Preference number: 2 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPSCMDW*IQKQNK
Trigger: CTTATTCTGCTTCTGGATCCACCAATCCATACATGA...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAGACGAGGGAGATCCTaGTGGGGTGATTCCTATTGG +
Preference number: 2 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFRRGRS*WGDSYW
Trigger: CCAATAGGAATCACCCCACCAGGATCTCCCTCGTCT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGACCCAAGAGCTCCGATaGAGATGCACAAGATTAATG +
Preference number: 2 (lower is better)
Translates to: HPSTQCGVSHCKRENMARTQELR*RCTRLM
Trigger: CATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGT...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTGTGCCAGTACCTTGTaGCTGGCAGCCTGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMCASTL*LAAWLA
Trigger: GGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAAAGAACTCAGTACCTaGATGGCACCACTCCGTTTT +
Preference number: 2 (lower is better)
Translates to: FRELQVSLWPTATCQTPAKELST*MAPLRF
Trigger: AAAACGGAGTGGTGCCATTCAGGTACTGAGTTCTTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTGTCGGCAAGTCTTaGCTGGCTCTGCTAACATCC +
Preference number: 2 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFVGKS*LALLTS
Trigger: GGATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCTTTCTTATATGTTGGTaGCATAAGAGTGGACAGGTT +
Preference number: 2 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPFLICW*HKSGQV
Trigger: AACCTGTCCACTCTTATGGCACCAACATATAAGAAA...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTTCTCTTCCTCTTTTaGGTCATCCCCAAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: FRELQVSLWPTATCQTPAFLFLF*VIPKQL
Trigger: AAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCATCCATCTCATGAGTaGGATAAGGAGGCAATTTCC +
Preference number: 2 (lower is better)
Translates to: FRELQVSLWPTATCQTPAHPSHE*DKEAIS
Trigger: GGAAATTGCCTCCTTATCCCACTCATGAGATGGATG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGCTTATTTTAAGAAATTaGCACACACACAGCCATCCC +
Preference number: 2 (lower is better)
Translates to: HPSTQCGVSHCKRENMARLILRN*HTHSHP
Trigger: GGGATGGCTGTGTGTGTGGCAATTTCTTAAAATAAG...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAGCCAACTGTTTAGCCTaGCTTGCGTTTTCAGTTTGT +
Preference number: 2 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGANCLA*LAFSVC
Trigger: ACAAACTGAAAACGCAAGCCAGGCTAAACAGTTGGC...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTGTGTAAGCCTCCTTaGACACAAGCAGTTCTATCA +
Preference number: 2 (lower is better)
Translates to: FRELQVSLWPTATCQTPALCKPP*TQAVLS
Trigger: TGATAGAACTGCTTGTGTCCAAGGAGGCTTACACAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CAA 90 bp AGGTGCAAGTTTCTTATATGTTGGTGCCATAAGAGTGGACAGGTTTaGCAAATGAGACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCC +
Preference number: 2 (lower is better)
Translates to: RCKFLICWCHKSGQV*QMRLQFLFLFWVIP
Trigger: GGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTCTCATTTGCAAAACCTGTCCACTCTTATGGCACCAACATATAAGAAACTTGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGCTTTGCACACTCAATaGGAATTGACCCATGAGTTG +
Preference number: 2 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFALHTQ*ELTHEL
Trigger: CAACTCATGGGTCAATTCTCATTGAGTGTGCAAAGC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAACTTCCTTGGGATCTTaGTTCTGGCAAACTTACATC +
Preference number: 2 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGTSLGS*FWQTYI
Trigger: GATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGT...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGGATAAGGACTAACTaGATTGGGCCGTCTCATGTA +
Preference number: 2 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFWIRTN*IGPSHV
Trigger: TACATGAGACGGCCCAATCCAGTTAGTCCTTATCCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCAGACGGCACTCTGGTaGTCTGTGTTCATATTCAAT +
Preference number: 2 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAQTALW*SVFIFN
Trigger: ATTGAATATGAACACAGAGCACCAGAGTGCCGTCTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGATTTCTCTAATAGCTaGCACATTAGGACCTGCTCC +
Preference number: 2 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLDFSNS*HIRTCS
Trigger: GGAGCAGGTCCTAATGTGGCAGCTATTAGAGAAATC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCATTCCTGTTCATGCCTaGGTTTTCTGGCATCCATCG +
Preference number: 2 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSIPVHA*VFWHPS
Trigger: CGATGGATGCCAGAAAACCCAGGCATGAACAGGAAT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR-3UTR TCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCGGTGTTTTAGCCCAGTaGGGCAACTTAATAACCACA +
Preference number: 2 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSGVLAQ*GNLITT
Trigger: TGTGGTTATTAAGTTGCCTCACTGGGCTAAAACACC...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAGGTTTCCATTGCATTaGTATGATGGATATTGGGTA +
Preference number: 2 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFRFPLH*YDGYWV
Trigger: TACCCAATATCCATCATATCAATGCAATGGAAACCT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR TCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACAACCCACAATATCTCTaGGGTATGCCTGTATCATAT +
Preference number: 2 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYNPQYL*GMPVSY
Trigger: ATATGATACAGGCATACCTCAGAGATATTGTGGGTT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGTTTTGGCTCATTCATaGTCTTATGCTGGTAAAAGA +
Preference number: 2 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPVLAHS*SYAGKR
Trigger: TCTTTTACCAGCATAAGAGCATGAATGAGCCAAAAC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAACTGCTGTGGGTTAAATaGTATCAAACAGCATTGCAT +
Preference number: 2 (lower is better)
Translates to: WIRAKYIESLLERYHHLELLWVK*YQTALH
Trigger: ATGCAATGCTGTTTGATAGCATTTAACCCACAGCAG...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTGGGATCTTGCTTCTaGCAAACTTACATCCATTGT +
Preference number: 2 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALGSCF*QTYIHC
Trigger: ACAATGGATGTAAGTTTGCCAGAAGCAAGATCCCAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCACTTTATTATCAGGTaGGAAAGCCAGAGTGGGACC +
Preference number: 2 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMHFIIR*ESQSGT
Trigger: GGTCCCACTCTGGCTTTCCCACCTGATAATAAAGTG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CAA 90 bp AGGCTGACTCTCTTGTTACAGGCTAATGCAGTTGATGATTTTAAGTaGAAGCCCATACTCATTTACCATTCTGAAAATTCCAAGGCCCTT +
Preference number: 2 (lower is better)
Translates to: RLTLLLQANAVDDFK*KPILIYHSENSKAL
Trigger: AAGGGCCTTGGAATTTTCAGAATGGTAAATGAGTATGGGCTTCAACTTAAAATCATCAACTGCATTAGCCTGTAACAAGAGAGTCAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CAA 90 bp ATAGATAGAAGTCAATGCCTTGCTTCAAAGGACAGGCTGACTCTCTaGTTACAGGCTAATGCAGTTGATGATTTTAAGTTGAAGCCCATA +
Preference number: 2 (lower is better)
Translates to: IDRSQCLASKDRLTL*LQANAVDDFKLKPI
Trigger: TATGGGCTTCAACTTAAAATCATCAACTGCATTAGCCTGTAACAAGAGAGTCAGCCTGTCCTTTGAAGCAAGGCATTGACTTCTATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR TCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGAGCTTCAGATTTTTATaGGCCTTTACAAATTGCTGC +
Preference number: 2 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLSFRFL*AFTNCC
Trigger: GCAGCAATTTGTAAAGGCTCATAAAAATCTGAAGCT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR TCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTGTGATAAGAGAAGAGTaGAGACGATTACAACTTACC +
Preference number: 2 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSVIREE*RRLQLT
Trigger: GGTAAGTTGTAATCGTCTTCACTCTTCTCTTATCAC...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTACATGATGTACATTTaGTCTAATGGTACAACTGCT +
Preference number: 2 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFYMMYI*SNGTTA
Trigger: AGCAGTTGTACCATTAGACCAAATGTACATCATGTA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCGTTCGTACATTAGACTaGCTATGGTCGTTATTTTCT +
Preference number: 2 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSVRTLD*LWSLFS
Trigger: AGAAAATAACGACCATAGGCAGTCTAATGTACGAAC...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR GCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCGCTATCAAACAGCATTaGATGCTACAGAGAAATCTT +
Preference number: 2 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSAIKQH*MLQRNL
Trigger: AAGATTTCTCTGTAGCATGCAATGCTGTTTGATAGC...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR GCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTGAAGAGTTGTATGCCTaGCACTTTAAATCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSEELYA*HFKSKA
Trigger: AGCTTTTGATTTAAAGTGGCAGGCATACAACTCTTC...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAAGTTTCTTATATGTTaGTGCCATAAGAGTGGACAG +
Preference number: 2 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKKFLIC*CHKSGQ
Trigger: CTGTCCACTCTTATGGCACCAACATATAAGAAACTT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTTGTTAGTCTACAGCTaGCAAGATAGTCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMLLVYS*QDSLLM
Trigger: CATCAGAAGACTATCTTGGCAGCTGTAGACTAACAA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR GCA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGCTTTCAAAATATTACTaGTCAAGGCACCTAGTCACC +
Preference number: 2 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVLSKYY*SRHLVT
Trigger: GGTGACTAGGTGCCTTGAGCAGTAATATTTTGAAAG...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCCCCAGAATATTGCTTaGTTTATTGTCAAGGATACC +
Preference number: 2 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMPQNIA*FIVKDT
Trigger: GGTATCCTTGACAATAAACCAAGCAATATTCTGGGG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCACATTTAAAGCTAACTaGAAGCCTACCTATTACTTG +
Preference number: 2 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSTFKAN*KPTYYL
Trigger: CAAGTAATAGGTAGGCTTCCAGTTAGCTTTAAATGT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CAA 90 bp ACATCACTGTGCGTCAATCAAGATGAAAAATTCATTCAAGTAAAGTaGACACCACTCAGAAGCATTTTCAAGTATGGCTATATAGTCAAC +
Preference number: 2 (lower is better)
Translates to: TSLCVNQDEKFIQVK*TPLRSIFKYGYIVN
Trigger: GTTGACTATATAGCCATACTTGAAAATGCTTCTGAGTGGTGTCAACTTTACTTGAATGAATTTTTCATCTTGATTGACGCACAGTGATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR GCA 72 bp TGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTaGCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGA +
Preference number: 3 (lower is better)
Translates to: WESQSGTSRWSL*QYLVAGSLAGR
Trigger: TCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CCA 72 bp TGCTGCTGGGGCTGTGGTGGCTGCTTCTGTAGAGGCTaGGGCTGCTGGGACTGCTGCATGACTGGTCCTGAA +
Preference number: 3 (lower is better)
Translates to: CCWGCGGCFCRG*GCWDCCMTGPE
Trigger: TTCAGGACCAGTCATGCAGCAGTCCCAGCAGCCCCAGCCTCTACAGAAGCAGCCACCACAGCCCCAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 72 bp GTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTaGCTGGCCGATTCCTGTTCATGCCTGGGTTTTCTG +
Preference number: 3 (lower is better)
Translates to: VGACASTLWLAA*LADSCSCLGFL
Trigger: CAGAAAACCCAGGCATGAACAGGAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR GCA 72 bp GGCTGCTTCTGTAGAGGCTGGGGCTGCTGGGACTGCTaGATGACTGGTCCTGAAAGTCGCAAAAGTTCTGCC +
Preference number: 3 (lower is better)
Translates to: GCFCRGWGCWDC*MTGPESRKSSA
Trigger: GGCAGAACTTTTGCGACTTTCAGGACCAGTCATGCAGCAGTCCCAGCAGCCCCAGCCTCTACAGAAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 72 bp ATTATCAGGTGGGAAAGCCAGAGTGGGACCTCTCGTTaGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: IIRWESQSGTSR*SLCQYLVAGSL
Trigger: CAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCTGATAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCAAGGCACACCGGCGATaGGTGAGCGTGCCGTATTTC +
Preference number: 3 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPKAHRR*VSVPYF
Trigger: GAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR TCA 72 bp CCCAATGTCAGGATCCAGAAAGCTCTGCTCGCTGTCTaGCCAGACCTCATCGTTGTCCTCTGCACCAGAAGC +
Preference number: 3 (lower is better)
Translates to: PNVRIQKALLAV*PDLIVVLCTRS
Trigger: GCTTCTGGTGCAGAGGACAACGATGAGGTCTGGTCAGACAGCGAGCAGAGCTTTCTGGATCCTGACATTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR TCA 72 bp GGCAAGAGACTTGATGAAACGCAGGTAAGTGGGCTCTaGAGTTTCATGTGGCTCAGCAGGCTCCCGTTTCAC +
Preference number: 3 (lower is better)
Translates to: GKRLDETQVSGL*SFMWLSRLPFH
Trigger: GTGAAACGGGAGCCTGCTGAGCCACATGAAACTTCAGAGCCCACTTACCTGCGTTTCATCAAGTCTCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCCTTAGACAGAGGGTCTaGGCTTGGATACCTATACAG +
Preference number: 3 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPLRQRV*AWIPIQ
Trigger: CTGTATAGGTATCCAAGCCAAGACCCTCTGTCTAAG...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 72 bp TCTGTTGTAAGGCCCTGTGACCCGAGTGAAGGCATATaGAGATGTAGTTACTGTGGAGTCTGTGGTCACGGA +
Preference number: 3 (lower is better)
Translates to: SVVRPCDPSEGI*RCSYCGVCGHG
Trigger: TCCGTGACCACAGACTCCACAGTAACTACATCTCCATATGCCTTCACTCGGGTCACAGGGCCTTACAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 72 bp ACAGTAGGAGTCCTCCCTCCATCCTTCTACACAGTGTaGGGTATCTCATTGCAAGAGGGAAAACATGGCACG +
Preference number: 3 (lower is better)
Translates to: TVGVLPPSFYTV*GISLQEGKHGT
Trigger: CGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATGGAGGGAGGACTCCTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CCA 72 bp GCTTTGACACTTTATTATCAGGTGGGAAAGCCAGAGTaGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGT +
Preference number: 3 (lower is better)
Translates to: ALTLYYQVGKPE*DLSLEPVPVPC
Trigger: ACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCTGATAATAAAGTGTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CCA 72 bp TACTGCTCAAGGCACCTAGTCACCCAAGAGCTCCGATaGAGATGCACAAGATTAATGCTGTTTTCGTGCCTG +
Preference number: 3 (lower is better)
Translates to: YCSRHLVTQELR*RCTRLMLFSCL
Trigger: CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGACTAGGTGCCTTGAGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR TCA 72 bp TGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTaGCAGACTCTGTCTGAGGGTGATGTGGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: CMDWWIQKQNKS*QTLSEGDVAAA
Trigger: AGCAGCAGCCACATCACCCTCAGACAGAGTCTGTCAACTCTTATTCTGCTTCTGGATCCACCAATCCATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR TCA 72 bp CCTTGTTTTGGAGATGCAGGGCATGAAGAGAGCTGTTaGACATGCCCGGAGCTGCACTGTAGTTATGGATTA +
Preference number: 3 (lower is better)
Translates to: PCFGDAGHEESC*TCPELHCSYGL
Trigger: TAATCCATAACTACAGTGCAGCTCCGGGCATGTTCAACAGCTCTCTTCATGCCCTGCATCTCCAAAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CAA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAGTTTCTCTTCCTCTTTaGGGTCATCCCCAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGVSLPL*GHPQAA
Trigger: AGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAAC...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCGTCTCATGTATGGATaGGTGGATCCAGAAGCAGAA +
Preference number: 3 (lower is better)
Translates to: FRELQVSLWPTATCQTPARLMYG*VDPEAE
Trigger: TTCTGCTTCTGGATCCACCAATCCATACATGAGACG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGTCATTCTCCTTGTTTaGGAGATGCAGGGCATGAAG +
Preference number: 3 (lower is better)
Translates to: FRELQVSLWPTATCQTPAVILLV*EMQGMK
Trigger: CTTCATGCCCTGCATCTCCAAAACAAGGAGAATGAC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCAGCTGCAGCTTTCTaGGCTTCTAGTTTCCTTTGT +
Preference number: 3 (lower is better)
Translates to: FRELQVSLWPTATCQTPASAAAF*ASSFLC
Trigger: ACAAAGGAAACTAGAAGCCAAGAAAGCTGCAGCTGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCGTTTTCAGTTTGTTTaGTACGTGATGGGGCTGACT +
Preference number: 3 (lower is better)
Translates to: FRELQVSLWPTATCQTPARFQFV*YVMGLT
Trigger: AGTCAGCCCCATCACGTACAAAACAAACTGAAAACG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGAGCCAAGCCATGTTTaGGCTCATTCATGCTCTTAT +
Preference number: 3 (lower is better)
Translates to: FRELQVSLWPTATCQTPAEPSHV*AHSCSY
Trigger: ATAAGAGCATGAATGAGCCAAAACATGGCTTGGCTC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR TCA 72 bp AGGAGTTCAAGACTTCCGTGGAGAGGTCACTGCAGATaGGGGAGATGTAGCAAGAGAACCAGAATTAGAAGT +
Preference number: 3 (lower is better)
Translates to: RSSRLPWRGHCR*GRCSKRTRIRS
Trigger: ACTTCTAATTCTGGTTCTCTTGCTACATCTCCCTCATCTGCAGTGACCTCTCCACGGAAGTCTTGAACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CAA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGACCTCCAAATTCTCGATaGTCTTCTCTAGTGAGAGTG +
Preference number: 3 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGPPNSR*SSLVRV
Trigger: CACTCTCACTAGAGAAGACAATCGAGAATTTGGAGG...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR GCA 72 bp ACCACATTTGTCATGAATACTGTGACCTTTCCCCACTaGCCACGTCATGAGAACTATACTACTGACAGGTTG +
Preference number: 3 (lower is better)
Translates to: TTFVMNTVTFPH*PRHENYTTDRL
Trigger: CAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAAAGGTCACAGTATTCATGACAAATGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR GCA 72 bp TCAAGGCACCTAGTCACCCAAGAGCTCCGATGGAGATaGACAAGATTAATGCTGTTTTCGTGCCTGTTAATA +
Preference number: 3 (lower is better)
Translates to: SRHLVTQELRWR*TRLMLFSCLLI
Trigger: TATTAACAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGACTAGGTGCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR GCA 72 bp CATGTCAAAAGCCAAGACAGGCTGAAAGCTAGGCCTTaGATGCCAGTTAGCCAAGTTGTGAATGTAAAGGAA +
Preference number: 3 (lower is better)
Translates to: HVKSQDRLKARP*MPVSQVVNVKE
Trigger: TTCCTTTACATTCACAACTTGGCTAACTGGCATGCAAGGCCTAGCTTTCAGCCTGTCTTGGCTTTTGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CCA 72 bp TGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATaGATTGGTGGATCCAGAAGCAGAATAAGAGTTGAC +
Preference number: 3 (lower is better)
Translates to: WIRTNWIGPSHV*IGGSRSRIRVD
Trigger: GTCAACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CAA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGGTAATATTCATTTTATaGTGGTATGGAGCCAAACCC +
Preference number: 3 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLVIFIL*WYGAKP
Trigger: GGGTTTGGCTCCATACCACAATAAAATGAATATTAC...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR TCA 72 bp TCATCCACGTCAGAGACTTTGTATAAAGGCAGAACGTaGAGCTGCTCATCCTCAGGTTTTCCTCCAAATTCT +
Preference number: 3 (lower is better)
Translates to: SSTSETLYKGRT*SCSSSGFPPNS
Trigger: AGAATTTGGAGGAAAACCTGAGGATGAGCAGCTTCACGTTCTGCCTTTATACAAAGTCTCTGACGTGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR GCA 72 bp CCATCTGTGACCACTTGGGAGCCAGTGAAAATTAAGTaGTATGGTAAGATAACCTCTTTTGTTGCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: PSVTTWEPVKIK*YGKITSFVAGE
Trigger: CTCACCAGCAACAAAAGAGGTTATCTTACCATAGCACTTAATTTTCACTGGCTCCCAAGTGGTCACAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR GCA 72 bp TTGTACAATCTGTTGCACACCATACCTGTAGGTGTTTaGCTGTTTAAGGGAAGTCCACATGGAGTATGTACC +
Preference number: 3 (lower is better)
Translates to: LYNLLHTIPVGV*LFKGSPHGVCT
Trigger: GGTACATACTCCATGTGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR GCA 72 bp GGTAAATGGTGCAAACATAATCTGATAAATGTTGTGTaGATTCTGCCTGCTCTATCAACCAGCCGTTTGGGC +
Preference number: 3 (lower is better)
Translates to: GKWCKHNLINVV*ILPALSTSRLG
Trigger: GCCCAAACGGCTGGTTGATAGAGCAGGCAGAATGCACACAACATTTATCAGATTATGTTTGCACCATTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CCA 72 bp CTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTaGGATCTTGCTTCTGGCAAACTTACATCCATTGTA +
Preference number: 3 (lower is better)
Translates to: LFWVIPKQLKLP*DLASGKLTSIV
Trigger: TACAATGGATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 72 bp GGGATAAGGAGGCAATTTCCCTACATGATGTACATTTaGTCTAATGGTACAACTGCTGAAACCATCTCCCTG +
Preference number: 3 (lower is better)
Translates to: GIRRQFPYMMYI*SNGTTAETISL
Trigger: CAGGGAGATGGTTTCAGCAGTTGTACCATTAGACCAAATGTACATCATGTAGGGAAATTGCCTCCTTATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR TCA 72 bp CACATGAAAGGTAAGAAAGCAAAACGGCCTTATTGCTaGTATGGAGAGCGCTTTAGTGGTCTGGATAGAAGA +
Preference number: 3 (lower is better)
Translates to: HMKGKKAKRPYC*YGERFSGLDRR
Trigger: TCTTCTATCCAGACCACTAAAGCGCTCTCCATATCAGCAATAAGGCCGTTTTGCTTTCTTACCTTTCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR TCA 72 bp CAAGATAGTCTTCTGATGGATCCGGGCAAAGTACATTaGAAGCCTTCTGGAAAGGTATCACCATTTAGAAGT +
Preference number: 3 (lower is better)
Translates to: QDSLLMDPGKVH*KPSGKVSPFRS
Trigger: ACTTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCATCAGAAGACTATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR TCA 72 bp AATATTATCTATGAGATGTGTGGTGTTTTAGCCCAGTaGGGCAACTTAATAACCACACGCAAAGAGGGACAG +
Preference number: 3 (lower is better)
Translates to: NIIYEMCGVLAQ*GNLITTRKEGQ
Trigger: CTGTCCCTCTTTGCGTGTGGTTATTAAGTTGCCTCACTGGGCTAAAACACCACACATCTCATAGATAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR TCA 72 bp AGACTATTAGTCCTGTCAAATATTGTGACTCTCTGGTaGATAGCACAGTGTGTAGTGTTGGCAACCCTAGAA +
Preference number: 3 (lower is better)
Translates to: RLLVLSNIVTLW*IAQCVVLATLE
Trigger: TTCTAGGGTTGCCAACACTACACACTGTGCTATTCACCAGAGAGTCACAATATTTGACAGGACTAATAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CCA 72 bp TTGTGTAAGCCTCCTTGGACACAAGCAGTTCTATCATaGTTAAGAGCTGGAAGCATCTTTGATAACCCATTA +
Preference number: 3 (lower is better)
Translates to: LCKPPWTQAVLS*LRAGSIFDNPL
Trigger: TAATGGGTTATCAAAGATGCTTCCAGCTCTTAACCATGATAGAACTGCTTGTGTCCAAGGAGGCTTACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 72 bp GAAGCTGCAGAAGAGAAGTTGGAAGCTAGCAGAAGTTaGTTTATAAAGTTTAAGAAGCGCAGCTGTCTCTAT +
Preference number: 3 (lower is better)
Translates to: EAAEEKLEASRS*FIKFKKRSCLY
Trigger: ATAGAGACAGCTGCGCTTCTTAAACTTTATAAACCAACTTCTGCTAGCTTCCAACTTCTCTTCTGCAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAACTTCCTTGGGATCTaGCTTCTGGCAAACTTACAT +
Preference number: 3 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKNFLGI*LLANLH
Trigger: ATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGTT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCAATTGTTTACTGCTTaGTGTGTGAAGGCTGGAAAA +
Preference number: 3 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLQLFTA*CVKAGK
Trigger: TTTTCCAGCCTTCACACACAAAGCAGTAAACAATTG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR TCA 72 bp CGGAGCTGCACTGTAGTTATGGATTATGTGAGAAGGTaGATGATGTTCACCATTTTTATAGTCCATGTTTGG +
Preference number: 3 (lower is better)
Translates to: RSCTVVMDYVRR*MMFTIFIVHVW
Trigger: CCAAACATGGACTATAAAAATGGTGAACATCATTCACCTTCTCACATAATCCATAACTACAGTGCAGCTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR GCA 72 bp CTAACCCTGTTTATTCATCTTATGCAGGCATCAGTCTaGTCAATCCTCTTGTTAAAGAGGACACTTAAGCTA +
Preference number: 3 (lower is better)
Translates to: LTLFIHLMQASV*SILLLKRTLKL
Trigger: TAGCTTAAGTGTCCTCTTTAACAAGAGGATTGAGCAGACTGATGCCTGCATAAGATGAATAAACAGGGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR-3UTR CAA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTTCGTTTTATTGTGCTTaGTTCTTTTGTGAGTCACAG +
Preference number: 3 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSSFYCA*FFCESQ
Trigger: CTGTGACTCACAAAAGAACAAAGCACAATAAAACGA...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR GCA 72 bp ATTATATGCATCAGGTGCAAGTTTCTTATATGTTGGTaGCATAAGAGTGGACAGGTTTTGCAAATGAGACTC +
Preference number: 3 (lower is better)
Translates to: IICIRCKFLICW*HKSGQVLQMRL
Trigger: GAGTCTCATTTGCAAAACCTGTCCACTCTTATGGCACCAACATATAAGAAACTTGCACCTGATGCATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR GCA 72 bp TGGTTCTTTTCTTATACCACACTTTACCAGTCTTTCTaGTTTGACACTTTATTATCAGGTGGGAAAGCCAGA +
Preference number: 3 (lower is better)
Translates to: WFFSYTTLYQSF*FDTLLSGGKAR
Trigger: TCTGGCTTTCCCACCTGATAATAAAGTGTCAAAGCAGAAAGACTGGTAAAGTGTGGTATAAGAAAAGAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CCA 72 bp AGAGGACTGAGTCCAATTTTCAAAGAAATTCTGCTGTaGGTTAAATGCTATCAAACAGCATTGCATGCTACA +
Preference number: 3 (lower is better)
Translates to: RGLSPIFKEILL*VKCYQTALHAT
Trigger: TGTAGCATGCAATGCTGTTTGATAGCATTTAACCCACAGCAGAATTTCTTTGAAAATTGGACTCAGTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CCA 72 bp TCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTaGCAAATAGTTAGTATCCAGCCACATGGAAAATAT +
Preference number: 3 (lower is better)
Translates to: SSKNVSQFRKGG*QIVSIQPHGKY
Trigger: ATATTTTCCATGTGGCTGGATACTAACTATTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR TCA 72 bp AGAAGTGAACTGTACATCACTGTGCGTCAATCAAGATaGAAAATTCATTCAAGTAAAGTTGACACCACTCAG +
Preference number: 3 (lower is better)
Translates to: RSELYITVRQSR*KIHSSKVDTTQ
Trigger: CTGAGTGGTGTCAACTTTACTTGAATGAATTTTTCATCTTGATTGACGCACAGTGATGTACAGTTCACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR CCA 72 bp TACATATATACGTTTATTGTCCTACAAGGACTTCACTaGATGAGCAAAATCCAGAGGCCTTTAAAATGTCCA +
Preference number: 3 (lower is better)
Translates to: YIYTFIVLQGLH*MSKIQRPLKCP
Trigger: TGGACATTTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
3UTR GCA 72 bp AGTCCAATTTTCAAAGAAATTCTGCTGTGGGTTAAATaGTATCAAACAGCATTGCATGCTACAGAGAAATCT +
Preference number: 3 (lower is better)
Translates to: SPIFKEILLWVK*YQTALHATEKS
Trigger: AGATTTCTCTGTAGCATGCAATGCTGTTTGATAGCATTTAACCCACAGCAGAATTTCTTTGAAAATTGGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CCA 72 bp ATTATTATATGCATCAGGTGCAAGTTTCTTATATGTTaGTGCCATAAGAGTGGACAGGTTTTGCAAATGAGA +
Preference number: 3 (lower is better)
Translates to: IIICIRCKFLIC*CHKSGQVLQMR
Trigger: TCTCATTTGCAAAACCTGTCCACTCTTATGGCACCAACATATAAGAAACTTGCACCTGATGCATATAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CCA 72 bp ACAATATTGAAATTAGGCCAATTAATAACCCTACAGTaGCCTCTAAGTGTTCAAGTGAAAGGAAGAGTTGTA +
Preference number: 3 (lower is better)
Translates to: TILKLGQLITLQ*PLSVQVKGRVV
Trigger: TACAACTCTTCCTTTCACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATATTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR TCA 72 bp ATCAAACAGCATTGCATGCTACAGAGAAATCTTTTGTaGATGGAAAAATCAATTGATACAGCACTTCACTGT +
Preference number: 3 (lower is better)
Translates to: IKQHCMLQRNLL*MEKSIDTALHC
Trigger: ACAGTGAAGTGCTGTATCAATTGATTTTTCCATTCACAAAAGATTTCTCTGTAGCATGCAATGCTGTTTGAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR TCA 72 bp TCTTGTTACAGGCTAATGCAGTTGATGATTTTAAGTTaGAGCCCATACTCATTTACCATTCTGAAAATTCCA +
Preference number: 3 (lower is better)
Translates to: SCYRLMQLMILS*SPYSFTILKIP
Trigger: TGGAATTTTCAGAATGGTAAATGAGTATGGGCTTCAACTTAAAATCATCAACTGCATTAGCCTGTAACAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CCA 72 bp TCCAGTATTTCAGTACATCATATATTCAGCACCAGATaGTATTTTAAGATTCCTGTCACTGTAATACTACAG +
Preference number: 3 (lower is better)
Translates to: SSISVHHIFSTR*YFKIPVTVILQ
Trigger: CTGTAGTATTACAGTGACAGGAATCTTAAAATACCATCTGGTGCTGAATATATGATGTACTGAAATACTGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTGGGGTCTCTGCTGCTaGTGGGGCTGTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAWGLCC*WGCGGC
Trigger: GCAGCCACCACAGCCCCAGCAGCAGCAGAGACCCCA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCCTTCTGAAGGAAGCTaGGGAACCTGTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFPSEGS*GTCGRG
Trigger: TCCTCTTCCACAGGTTCCTCAGCTTCCTTCAGAAGG...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCTGGGATTCCGCTTGGTaGAAACGAGGGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFWDSAW*KRGAFN
Trigger: ATTGAAGGCCCCTCGTTTTCACCAAGCGGAATCCCA...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCGAAGTGCACCTGGTGTaGGGGTTTTTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFEVHLV*GFLELE
Trigger: CTCCAGTTCCAAAAACCCTCACACCAGGTGCACTTC...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCCGAGGGGGCGGACGTaGCTTGCATGCGAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSPRGRT*LACERD
Trigger: GTCCCGCTCGCATGCAAGTCACGTCCGCCCCCTCGG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTCTCGCCGCTGCCACTaGCGCTACCGCCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSRRCH*RYRRLS
Trigger: GGAGAGCCGGCGGTAGCGGCAGTGGCAGCGGCGAGA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGTAGGGGCCAGGGCTaGCGAGCGCGGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSRGQG*RARGRV
Trigger: CACCCTTCCCCGCGCTCGCCAGCCCTGGCCCCTACT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAGAGCAGCATGCTTTTaGGTGTCCTTCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVRAACF*VSFWGG
Trigger: CCCTCCCCAGAAGGACACTCAAAAGCATGCTGCTCT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCCGAGGGGGCGGACGTaGCTTGCATGCGAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAPRGRT*LACERD
Trigger: GTCCCGCTCGCATGCAAGTCACGTCCGCCCCCTCGG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCTCGCCGCTGCCACTaGCGCTACCGCCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASRRCH*RYRRLS
Trigger: GGAGAGCCGGCGGTAGCGGCAGTGGCAGCGGCGAGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAGGACTCTGGGAAGGTaGTGCCTCAGGTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVRTLGR*CLRFTL
Trigger: GAGGGTAAACCTGAGGCACCACCTTCCCAGAGTCCT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGTAGGGGCCAGGGCTaGCGAGCGCGGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASRGQG*RARGRV
Trigger: CACCCTTCCCCGCGCTCGCCAGCCCTGGCCCCTACT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCGCGCAGTGGAGACCTaGGCTGCCCTCACGCCGTGC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPARAVET*AALTPC
Trigger: GCACGGCGTGAGGGCAGCCCAGGTCTCCACTGCGCG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAGCGGGGCGCGCAGTaGAGACCTGGGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQRGAQ*RPGLPS
Trigger: TGAGGGCAGCCCAGGTCTCCACTGCGCGCCCCGCTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGAGGTATGCGATGGGTaGGTGATCTCACAGGACAAC +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAEVCDG*VISQDN
Trigger: GTTGTCCTGTGAGATCACTCACCCATCGCATACCTC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGGAATTGATCTGCCCTaGGGTATGCGATGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVGIDLP*GMRWVS
Trigger: ACTCACCCATCGCATACCTCAGGGCAGATCAATTCC...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCTTGGTGGGTTATGCTTaGGGTGTTCTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFLVGYA*GVLTLV
Trigger: GACCAATGTCAGAACACCTCAAGCATAACCCACCAA...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGGCCATCCACAAGGCTaGCCTCTAGTTGAATTCAGC +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVGHPQG*PLVEFS
Trigger: GCTGAATTCAACTAGAGGGCAGCCTTGTGGATGGCC...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCTGTGCGGAATTGATCTaGCCTGAGGTATGCGATGGG +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSCAELI*PEVCDG
Trigger: CCCATCGCATACCTCAGGGCAGATCAATTCCGCACA...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCACAAGATCTCGTGTTTaGTCCTTGTCTCGACCCTTC +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFTRSRV*SLSRPF
Trigger: GAAGGGTCGAGACAAGGAGCAAACACGAGATCTTGT...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTCTGGTGGTGCTGTGTaGATACAGGCATGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVSGGAV*IQACGL
Trigger: CAAGCCACATGCCTGTATGCACACAGCACCACCAGA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTGGGGTCTCTGCTGCTaGTGGGGCTGTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSWGLCC*WGCGGC
Trigger: GCAGCCACCACAGCCCCAGCAGCAGCAGAGACCCCA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGAGCGCGGGGAAGGGTaGAGCCCTCGGGAACCCCGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPERGEG*SPREPR
Trigger: CCGGGGTTCCCGAGGGCTGCACCCTTCCCCGCGCTC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGTGGAGACCTGGGCTaGCCTCACGCCGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSGDLG*PHAVQW
Trigger: CCACTGCACGGCGTGAGGGCAGCCCAGGTCTCCACT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCAGAGGTTCTGTCTaGCAAATGGGAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAARGSV*QMGGDG
Trigger: ACCATCACCTCCCATTTGCCAGACAGAACCTCTGGC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCGTCTCCATTTACTTCTaGATGAGCTCTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFVSIYF*MSSLRQ
Trigger: CTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGAC...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTACTCACCACTGCAGCTaGCTTTGGAGGCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMATHHCS*LWRQLR
Trigger: TCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGT...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCGGGAGATGTGAACTCTaGGATGGTTGTGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFGRCEL*DGCVCA
Trigger: AGCACAAACACAACCATCCCAGAGTTCACATCTCCC...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCTGCTTCTGTAGAGGCTaGGGCTGCTGGGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPCFCRG*GCWDCC
Trigger: GCAGCAGTCCCAGCAGCCCCAGCCTCTACAGAAGCA...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCACTTTATTATCAGGTaGGAAAGCCAGAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFHFIIR*ESQSGT
Trigger: GGTCCCACTCTGGCTTTCCCACCTGATAATAAAGTG...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CAA 72 bp TATTATCAGGTGGGAAAGCCAGAGTGGGACCTCTCGTaGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: YYQVGKPEWDLS*EPVPVPCGWQP
Trigger: AGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCTGATAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTGGAATTGATCTGCCCTaGGGTATGCGATGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAGIDLP*GMRWVS
Trigger: ACTCACCCATCGCATACCTCAGGGCAGATCAATTCC...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCATTGCTGCTGGAACCTaGACAGAATTCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFIAAGT*TEFFTR
Trigger: TCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAAT...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTCTAGTGCCACACAGTaGCTGCACATGAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVSSATQ*LHMSFW
Trigger: CCAAAAGCTCATGTGCAGTCACTGTGTGGCACTAGA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCTCTGAAGAAGTTGTTTaGTGCTCTAAAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFSEEVV*CSKAGV
Trigger: CACCCCAGCTTTAGAGCAGCAAACAACTTCTTCAGA...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCTGGCCAACAGCCACTTaGCAAACTCCTGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSWPTAT*QTPALQ
Trigger: TTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCA...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGTGGAGACCTGGGCTaGCCTCACGCCGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASGDLG*PHAVQW
Trigger: CCACTGCACGGCGTGAGGGCAGCCCAGGTCTCCACT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACCAAGCTCTCGCCGCTaGCACTGCCGCTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPPSSRR*HCRYRR
Trigger: CCGGCGGTAGCGGCAGTGGCAGCGGCGAGAGCTTGG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCCAAGCTCTCGCCGCTaGCACTGCCGCTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFPSSRR*HCRYRR
Trigger: CCGGCGGTAGCGGCAGTGGCAGCGGCGAGAGCTTGG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAAGTGGGCTTCCATTCTaGAGCTTTGTAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLASGLPF*SFVARG
Trigger: ACCTCTGGCTACAAAGCTCCAGAATGGAAGCCCACT...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTTATCAACCAGCCGTTTaGGCTCTCTCCCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPYQPAV*ALSLSL
Trigger: CAGGGAGAGGGAGAGAGCCCAAACGGCTGGTTGATA...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACAGCGGGGCGCGCAGTaGAGACCTGGGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPQRGAQ*RPGLPS
Trigger: TGAGGGCAGCCCAGGTCTCCACTGCGCGCCCCGCTG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
3UTR CAA 72 bp GCGCAAGTTCTCTCTTCATTCAAGGCACACCGGCGATaGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: AQVLSSFKAHRR*VSVPYFLSVSV
Trigger: TACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTTGAATGAAGAGAGAACTTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
3UTR CAA 72 bp AGAAAGCTCTGCTCGCTGTCTGACCAGACCTCATCGTaGTCCTCTGCACCAGAAGCCACACCCTGGACTAGT +
Preference number: 4 (lower is better)
Translates to: RKLCSLSDQTSS*SSAPEATPWTS
Trigger: ACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGGTCTGGTCAGACAGCGAGCAGAGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCTTGTTTCAATTTCTTaGTCTGAAGGAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFLVSIS*SEGAQR
Trigger: TCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAG...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAAGTGCTTTTTCCTTCTaGAGGAAGCTGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLASAFSF*RKLRNL
Trigger: CAGGTTCCTCAGCTTCCTTCAGAAGGAAAAAGCACT...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCCCTTGGGACTGCCCTTaGTTCATTTCAACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSPWDCP*FISTWY
Trigger: GTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGG...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAATAACGACTTGGCGTaGAACTGCTTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVNNDLA*NCFRCC
Trigger: GCAGCATCTGAAGCAGTTTCACGCCAAGTCGTTATT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCTATAAAGGCAGAACGTaGAGCTGCTCATCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSYKGRT*SCSSSG
Trigger: ACCTGAGGATGAGCAGCTTCACGTTCTGCCTTTATA...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCTGTGCGGAATTGATCTaGCCTGAGGTATGCGATGGG +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCCAELI*PEVCDG
Trigger: CCCATCGCATACCTCAGGGCAGATCAATTCCGCACA...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGGCCTCACTCACCACTaGAGCTGGCTTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSGLTHH*SWLWRQ
Trigger: CTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCTGGATGTTATTTTCTaGAGGAGATGGGCATATCTC +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFLDVIF*RRWAYL
Trigger: GAGATATGCCCATCTCCTGCAGAAAATAACATCCAG...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCACAGGAGCTTGCAAATTaGTGCTGGAACCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAQELAN*CWNLNR
Trigger: TCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTG...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCTGCCACCAGGAGCTTaGAAATTGCTGCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPLPPGA*KLLLEP
Trigger: AGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCTCCACCATTCAGAGTaGTTTTTCCTTCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFLHHSE*FFLLKE
Trigger: TTCCTTCAGAAGGAAAAAGCACTCTGAATGGTGGAG...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAATGTTGTGTGCATTCTaGCTGCTCTATCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAMLCAF*LLYQPA
Trigger: GGCTGGTTGATAGAGCAGGCAGAATGCACACAACAT...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGGGGCGGACGTGACTTaGATGCGAGCGGGACCCGGG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAGADVT*MRAGPG
Trigger: CCCGGGTCCCGCTCGCATGCAAGTCACGTCCGCCCC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGTCTCCATTTACTTCTaGATGAGCTCTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVVSIYF*MSSLRQ
Trigger: CTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGAC...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCGATGGATTAGGACTCTaGGAAGGTGGTGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCDGLGL*EGGASG
Trigger: ACCTGAGGCACCACCTTCCCAGAGTCCTAATCCATC...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTCTAAAGCTGGGGTGTaGCTATCAAGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVSKAGV*LSSSAA
Trigger: TGCTGCAGAACTTGATAGCCACACCCCAGCTTTAGA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCATCTAAAGCTGGGGTGTaGCTATCAAGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLASKAGV*LSSSAA
Trigger: TGCTGCAGAACTTGATAGCCACACCCCAGCTTTAGA...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGCAAGCGCGAAGGTTaGGGGCGAGGTGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASKREG*GRGGRL
Trigger: CAACCTCCCACCTCGCCCCCAACCTTCGCGCTTGCT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGCGGGTCTCCACCCCTaGGAGAAGAAGCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSAGLHP*EKKQSK
Trigger: CTTGCTCTGCTTCTTCTCCCAGGGGTGGAGACCCGC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCCCATTTACTTCTGGATaGGCTCTCTCAGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPPFTSG*ALSGSG
Trigger: CCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGG...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTAGTGCTTTTTCCTTCTaGAGGAAGCTGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMASAFSF*RKLRNL
Trigger: CAGGTTCCTCAGCTTCCTTCAGAAGGAAAAAGCACT...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAAACTTGGTACATTTGTaGCTTGTGCTCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLANLVHL*LVLQLC
Trigger: ACACAGCTGGAGCACAAGTCACAAATGTACCAAGTT...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAACTTGGTACATTTGTaGCTTGTGCTCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVNLVHL*LVLQLC
Trigger: ACACAGCTGGAGCACAAGTCACAAATGTACCAAGTT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGCACAGTGACTGCACATaGGCTTTTGGTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVHSDCT*AFGKWS
Trigger: AGACCATTTACCAAAAGCTCATGTGCAGTCACTGTG...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCGTCTCTGAAGCCTGTTaGTTCAAGTGCTGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSVSEAC*FKCCFN
Trigger: GTTGAAACAGCACTTGAATCAACAGGCTTCAGAGAC...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAAATGGCTCAGTCTCTaGAGCCTGTTGATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVKWLSL*SLLIQV
Trigger: CACTTGAATCAACAGGCTTCAGAGACTGAGCCATTT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAGTCTGGCCAAAGAATaGTCCTTCTCTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVSLAKE*SFSLLI
Trigger: GATCAGCAAAGAGAAGGATCATTCTTTGGCCAGACT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCACACCGGCGATTGGTaGGCGTGCCGTATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSHTGDW*ACRISS
Trigger: TGAGGAAATACGGCACGCTCACCAATCGCCGGTGTG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCCCACTTGGGAGCCAGTaGAAATTAAGTGCTATGGTA +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSPLGSQ*KLSAMV
Trigger: TACCATAGCACTTAATTTTCACTGGCTCCCAAGTGG...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGGTGTTTTAGCCCAGTaGGGCAACTTAATAACCACA +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVGVLAQ*GNLITT
Trigger: TGTGGTTATTAAGTTGCCTCACTGGGCTAAAACACC...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTACTCTGGGAAGGTGGTaGCTCAGGTTTACCCTCTAT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPTLGRW*LRFTLY
Trigger: ATAGAGGGTAAACCTGAGGCACCACCTTCCCAGAGT...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCTACATTTGTGACTTGTaGTCCAGCTGTGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFYICDL*SSCVVF
Trigger: GAAAACAACACAGCTGGAGCACAAGTCACAAATGTA...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGTGGCTATCAAGTTCTaGAGCAGTGGTTTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAVAIKF*SSGLSS
Trigger: ACTAGACAAACCACTGCTGCAGAACTTGATAGCCAC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCGTAGCTTCTCTTCACTaGTGCTTCTGCGAACCACCC +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPVASLH*CFCEPP
Trigger: GGGTGGTTCGCAGAAGCAGCAGTGAAGAGAAGCTAC...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCGAGAATCACAATCACTaGAGCCTCACAGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPENHNH*SLTGVA
Trigger: GGCCACACCTGTGAGGCTGCAGTGATTGTGATTCTC...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGGGGTCTCTGCTGCTaGTGGGGCTGTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFWGLCC*WGCGGC
Trigger: GCAGCCACCACAGCCCCAGCAGCAGCAGAGACCCCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCTTGTTAGTCTACAGCTaGCAAGATAGTCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFLLVYS*QDSLLM
Trigger: CATCAGAAGACTATCTTGGCAGCTGTAGACTAACAA...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGGGCGGACGTGACTTaGATGCGAGCGGGACCCGGG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGADVT*MRAGPG
Trigger: CCCGGGTCCCGCTCGCATGCAAGTCACGTCCGCCCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCCAAATCGGAGACATTTaGTTGACTGCTTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSQIGDI*LTAFTW
Trigger: CCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTG...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCACAAATCGGAGACATTTaGTTGACTGCTTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAQIGDI*LTAFTW
Trigger: CCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTG...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCATACATGTGTAGATaGATTAGGACTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAAYMCR*IRTLGR
Trigger: CCTTCCCAGAGTCCTAATCCATCTACACATGTATGC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGAGGGTTTTTGGAACTaGAGATGTTGGTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAEGFWN*RCWSTV
Trigger: TACAGTGGACCAACATCTCCAGTTCCAAAAACCCTC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTTGGAGAAGTGCACCTaGTGTGAGGGTTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMALEKCT*CEGFWN
Trigger: GTTCCAAAAACCCTCACACCAGGTGCACTTCTCCAA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCCTACAAGGACTTCACTaGATGAGCAAAATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSLQGLH*MSKIQR
Trigger: CCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAG...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCTACGCCAAGCAAACTaGATAATGGTTTTTAAGCCT +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFLRQAN*IMVFKP
Trigger: AGGCTTAAAAACCATTATCCAGTTTGCTTGGCGTAG...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGGTTGGGGGCGAGGTaGGAGGTTGGGATGGCACGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRLGAR*EVGMAR
Trigger: CCGTGCCATCCCAACCTCCCACCTCGCCCCCAACCT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGCTTGTTTCAATTTCTTaGTCTGAAGGAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVLVSIS*SEGAQR
Trigger: TCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAG...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGGTCTGTGCGGAATTaGTCTGCCCTGAGGTATGCG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSRSVRN*SALRYA
Trigger: CGCATACCTCAGGGCAGATCAATTCCGCACAGACCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTAGTGCTTTTTCCTTCTaGAGGAAGCTGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPSAFSF*RKLRNL
Trigger: CAGGTTCCTCAGCTTCCTTCAGAAGGAAAAAGCACT...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCCTTGGGACTGCCCTTaGTTCATTTCAACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPPWDCP*FISTWY
Trigger: GTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCGTTTTGAGGGAGATGTaGACTCTGGGATGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCVLREM*TLGWLC
Trigger: ACACAACCATCCCAGAGTTCACATCTCCCTCAAAAC...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTATCAAGTACCTTTGCTaGGCAAGTTGCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPIKYLC*ASCAAC
Trigger: ACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTGAT...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTATTGGCCTGTGCATCTaGCTATGGCAAGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPIGLCI*LWQDSV
Trigger: AACTGAGTCTTGCCATAGTCAGATGCACAGGCCAAT...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGCTCCATGGTCTCAATaGTGCTCTTTTGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPAPWSQ*CSFAAH
Trigger: ATGTGCAGCAAAAGAGCATCATTGAGACCATGGAGC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCGCTCCATGGTCTCAATaGTGCTCTTTTGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCAPWSQ*CSFAAH
Trigger: ATGTGCAGCAAAAGAGCATCATTGAGACCATGGAGC...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTGGTTGGTGTCTTTTCTaGAGAAGTTGTTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAGWCLF*RSCLLL
Trigger: GAGCAGCAAACAACTTCTTCAGAAAAGACACCAACC...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGCTGGGACTGCTGCATaGCTGGTCCTGAAAGTCGCA +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAAGTAA*LVLKVA
Trigger: TGCGACTTTCAGGACCAGTCATGCAGCAGTCCCAGC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTGTGGTCTTTTCAAGTaGGGTAACCAACAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMACGLFK*GNQQKG
Trigger: CCCCTTTTGTTGGTTACCTCACTTGAAAAGACCACA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCCGGGCAAAGTACATTaGAAGCCTTCTGGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPPGKVH*KPSGKV
Trigger: TACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTCGTCCCTCAGCCTTaGAGCAATCCAGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLVPQP*SNPAVA
Trigger: TGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGTGCTGCTGAATGTTTaGCAGCCTCGTTCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSVLLNV*QPRSRP
Trigger: GGGACGAGAACGAGGCTGGCAAACATTCAGCAGCAC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCAGGAGCTTGCAAATTaGTGCTGGAACCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPQELAN*CWNLNR
Trigger: TCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTAATACCGTTCAGAGCTaGCACCAGGAGCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPNTVQS*HQELAN
Trigger: ATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATT...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCACTCCACCATTCAGAGTaGTTTTTCCTTCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLALHHSE*FFLLKE
Trigger: TTCCTTCAGAAGGAAAAAGCACTCTGAATGGTGGAG...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCCCTGTAGCTCTCCACTaGTACCAAAAATTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCPVALH*YQKLVG
Trigger: ACCCACCAATTTTTGGTAGCAGTGGAGAGCTACAGG...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCGAAGAAGTTGTTTGCTaGTCTAAAGCTGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCEEVVC*SKAGVW
Trigger: CCACACCCCAGCTTTAGAGCAGCAAACAACTTCTTC...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGGCTGCTGGGACTGCTaGATGACTGGTCCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSGCWDC*MTGPES
Trigger: ACTTTCAGGACCAGTCATGCAGCAGTCCCAGCAGCC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATGCTGCTGGGGTCTCTaGTGCTGCTGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPCCWGL*CCWGCG
Trigger: ACCACAGCCCCAGCAGCAGCAGAGACCCCAGCAGCA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGCTGCTGGGGTCTCTaGTGCTGCTGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFCCWGL*CCWGCG
Trigger: ACCACAGCCCCAGCAGCAGCAGAGACCCCAGCAGCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGGATCCAGAAAGCTCTaGTCGCTGTCTGACCAGACC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSGSRKL*SLSDQT
Trigger: GGTCTGGTCAGACAGCGAGCAGAGCTTTCTGGATCC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGCGCGGGGAAGGGTaGAGCCCTCGGGAACCCCGG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPERGEG*SPREPR
Trigger: CCGGGGTTCCCGAGGGCTGCACCCTTCCCCGCGCTC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCCTCACACGACTATTCTaGCTTCCCTTCATACAGGGT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCLTRLF*LPFIQG
Trigger: ACCCTGTATGAAGGGAAGCCAGAATAGTCGTGTGAG...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACTCACCACTGCAGCTaGCTTTGGAGGCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTHHCS*LWRQLR
Trigger: TCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTTGTGTTACTTTGGTTaGGGTAGTGGTGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVLCYFG*GSGGVL
Trigger: AAGAACACCACCACTACCCCAACCAAAGTAACACAA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGAGGACTCTGGGAAGGTaGTGCCTCAGGTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: HPSTQCGVSHCKRENMARRTLGR*CLRFTL
Trigger: GAGGGTAAACCTGAGGCACCACCTTCCCAGAGTCCT...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCTGGTGTGAGGGTTTTTaGAACTGGAGATGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCWCEGF*NWRCWS
Trigger: GGACCAACATCTCCAGTTCCAAAAACCCTCACACCA...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTGTAAATGGTCTGTTTTaGAGAAGTGCACCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAVNGLF*RSAPGV
Trigger: CACACCAGGTGCACTTCTCCAAAACAGACCATTTAC...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCGGGAGATGTGAACTCTaGGATGGTTGTGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCGRCEL*DGCVCA
Trigger: AGCACAAACACAACCATCCCAGAGTTCACATCTCCC...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGCCATGTTTTGTTTTCTaGTGGTGCTGTGTGCATACA +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVPCFVF*WCCVHT
Trigger: TGTATGCACACAGCACCACCAGAAAACAAAACATGG...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGGTCAAATAACGACTTaGCGTGAAACTGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVGQITT*RETASD
Trigger: ATCTGAAGCAGTTTCACGCCAAGTCGTTATTTGACC...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCAGAGTAAGAGCCTTATaGTCAAATAACGACTTGGCG +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSRVRAL*SNNDLA
Trigger: CGCCAAGTCGTTATTTGACCATAAGGCTCTTACTCT...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCCAGAAGCCACACCCTaGACTAGTGCCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAPEATP*TSANGC
Trigger: GCAGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCACACAGGTGACATGTTaGCATAGGGAGAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPTQVTC*HRESMS
Trigger: GCTCATGCTCTCCCTATGCCAACATGTCACCTGTGT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTATTCATAAGGCAGTTTaGCGTCTGTTCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAIHKAV*RLFSSL
Trigger: GAGTGATGAGAACAGACGTCAAACTGCCTTATGAAT...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCATTAATGGCATTTATGTaGGATGTGGTTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLALMAFM*DVVFCT
Trigger: GGTGCAGAAAACCACATCTCACATAAATGCCATTAA...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTATGCTTGAGGTGTTCTaGCATTGGTCTTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAMLEVF*HWSCFL
Trigger: GAGAAAACAAGACCAATGTCAGAACACCTCAAGCAT...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTGGGATTCCGCTTGGTaGAAACGAGGGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSWDSAW*KRGAFN
Trigger: ATTGAAGGCCCCTCGTTTTCACCAAGCGGAATCCCA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGAAGTGCACCTGGTGTaGGGGTTTTTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSEVHLV*GFLELE
Trigger: CTCCAGTTCCAAAAACCCTCACACCAGGTGCACTTC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTCTCTGAAGCCTGTTaGTTCAAGTGCTGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPVSEAC*FKCCFN
Trigger: GTTGAAACAGCACTTGAATCAACAGGCTTCAGAGAC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCAGTTGCGCAGCTTGTTaGCCAGACATATCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCSCAAC*PDISWF
Trigger: AAACCAAGATATGTCTGGTCAACAAGCTGCGCAACT...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCGGTTGGTGTCTTTTCTaGAGAAGTTGTTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCGWCLF*RSCLLL
Trigger: GAGCAGCAAACAACTTCTTCAGAAAAGACACCAACC...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGTCCAAACATGCAGTaGCCCCTGAGAATGGACGGC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASPNMQ*PLRMDG
Trigger: GCCGTCCATTCTCAGGGGTCACTGCATGTTTGGACT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGGAATATACTTCCAATaGAGATGCTGTAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAGIYFQ*RCCKLL
Trigger: CAGCAGTTTACAGCATCTTCATTGGAAGTATATTCC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGTGATAAGAGAAGAGTaGAGACGATTACAACTTACC +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAVIREE*RRLQLT
Trigger: GGTAAGTTGTAATCGTCTTCACTCTTCTCTTATCAC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCTGTTCCATCAGGCTTaGTTCGGGGCCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPALFHQA*FGAIHK
Trigger: CTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTGAGCTTGCAAATTGCTaGTGGAACCTGAACAGAATT +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAELANC*WNLNRI
Trigger: AATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTC...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGCTTCTCTTCACTGCTaGTTCTGCGAACCACCCACT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSASLHC*FCEPPT
Trigger: AGTGGGTGGTTCGCAGAAGCAGCAGTGAAGAGAAGC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGGCTGCTGGGACTGCTaGATGACTGGTCCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAGCWDC*MTGPES
Trigger: ACTTTCAGGACCAGTCATGCAGCAGTCCCAGCAGCC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGCTGCTGGGGTCTCTaGTGCTGCTGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEACCWGL*CCWGCG
Trigger: ACCACAGCCCCAGCAGCAGCAGAGACCCCAGCAGCA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAAAGGGGTTGTGGCATaGAGCTCACGCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSKGVVA*SSRFAH
Trigger: GTGTGCAAAGCGTGAGCTGCATGCCACAACCCCTTT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCACTTACCTACACATCTaGAAGATGGGAAATCATATT +
Preference number: 4 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFTYLHI*KMGNHI
Trigger: AATATGATTTCCCATCTTGCAGATGTGTAGGTAAGT...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGATTTCTCTAATAGCTaGCACATTAGGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPDFSNS*HIRTCS
Trigger: GGAGCAGGTCCTAATGTGGCAGCTATTAGAGAAATC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCCCTTACTGCTCTTCCTaGATCATGTCCTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPPYCSS*IMSYWL
Trigger: CAGCCAATAGGACATGATCCAGGAAGAGCAGTAAGG...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGCCAGAGGTTCTGTCTaGCAAATGGGAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSARGSV*QMGGDG
Trigger: ACCATCACCTCCCATTTGCCAGACAGAACCTCTGGC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGAGCTCTCTCAGGCAGTaGGCTTCCATTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: HPSTQCGVSHCKRENMARSSLRQ*ASILEL
Trigger: AAGCTCCAGAATGGAAGCCCACTGCCTGAGAGAGCT...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGCTCTCTCAGGCAGTaGGCTTCCATTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSSLRQ*ASILEL
Trigger: AAGCTCCAGAATGGAAGCCCACTGCCTGAGAGAGCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCCCTGGATTTCTTTCTTaGCTTACCCCGAAGTTACGT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCPGFLS*LTPKLR
Trigger: ACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGG...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCTTGACTGCTTTCACCTaGATTTCTTTCTTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSLTAFT*ISFLAY
Trigger: GTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAA...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCACTGCAGCTGGCTTTaGAGGCAGCTCAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSHCSWL*RQLRVR
Trigger: TCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGCATACATGTGTAGATaGATTAGGACTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPAYMCR*IRTLGR
Trigger: CCTTCCCAGAGTCCTAATCCATCTACACATGTATGC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTTTTCTCATCAACTGCTaGCAGTTGTCCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPFLINC*QLSCSS
Trigger: AGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAA...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCCAATTCAATCCATCCTaGTTTCAGATAGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSQFNPS*FQIVLC
Trigger: ACACAGCACTATCTGAAACCAGGATGGATTGAATTG...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCGAGGGTTTTTGGAACTaGAGATGTTGGTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCEGFWN*RCWSTV
Trigger: TACAGTGGACCAACATCTCCAGTTCCAAAAACCCTC...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGTGCATACAGGCATGTaGCTTGCATCCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSVHTGM*LASRFH
Trigger: GTGGAACCTGGATGCAAGCCACATGCCTGTATGCAC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGCACCACAGGTTTCTaGATCCAGCCCCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGTTGF*IQPLTG
Trigger: GCCTGTCAGGGGCTGGATCCAGAAACCTGTGGTGCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCGAGGGAGATCCTGGTaGGGTGATTCCTATTGGGAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSRGRSW*GDSYWD
Trigger: ATCCCAATAGGAATCACCCCACCAGGATCTCCCTCG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTGTGGTCACGGACATaGTCCTTTCGGCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLWSRT*SFRQET
Trigger: AGTCTCTTGCCGAAAGGACCATGTCCGTGACCACAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTGTGCCAGTACCTTGTaGCTGGCAGCCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLCASTL*LAAWLA
Trigger: GGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACGCGCAGTGGAGACCTaGGCTGCCCTCACGCCGTGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPRAVET*AALTPC
Trigger: GCACGGCGTGAGGGCAGCCCAGGTCTCCACTGCGCG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAAGGCTGCCCTCTAGTTaGATTCAGCAGCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGRLPSS*IQQLSP
Trigger: GGGACTGAGCTGCTGAATTCAACTAGAGGGCAGCCT...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTTCCATAATAACTTTTaGAAGAGTGCCACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVFHNNF*KSATWC
Trigger: ACACCAAGTGGCACTCTTTCAAAAGTTATTATGGAA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTTTCAATTTCTTGATCTaGAGGAGCCCAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPFNFLI*RSPERE
Trigger: TTCTCTCTCTGGGCTCCTTCAGATCAAGAAATTGAA...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCTTCAATTTCTTGATCTaGAGGAGCCCAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCFNFLI*RSPERE
Trigger: TTCTCTCTCTGGGCTCCTTCAGATCAAGAAATTGAA...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAAACTCATTAGTAGCCTaGCTGTTAATGGCATTTATG +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLANSLVA*LLMAFM
Trigger: CATAAATGCCATTAACAGTCAGGCTACTAATGAGTT...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGGAATTGATCTGCCCTaGGGTATGCGATGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAGIDLP*GMRWVS
Trigger: ACTCACCCATCGCATACCTCAGGGCAGATCAATTCC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTTCACACAATTATTCTaGGGCCTTTCAGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAFTQLF*GLSESI
Trigger: GATGCTTTCTGAAAGGCCTCAGAATAATTGTGTGAA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCATGCTTGAGGTGTTCTaGCATTGGTCTTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCMLEVF*HWSCFL
Trigger: GAGAAAACAAGACCAATGTCAGAACACCTCAAGCAT...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTCTAGTGCCACACAGTaGCTGCACATGAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSSATQ*LHMSFW
Trigger: CCAAAAGCTCATGTGCAGTCACTGTGTGGCACTAGA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTAGAGCAGCATGCTTTTaGGTGTCCTTCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVRAACF*VSFWGG
Trigger: CCCTCCCCAGAAGGACACTCAAAAGCATGCTGCTCT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTTTTACTTGCTTCTGTaGTTTGAGAGTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVFYLLL*FESKSL
Trigger: AAGGCTCTTACTCTCAAATCACAGAAGCAAGTAAAA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCATTTTACTTGCTTCTGTaGTTTGAGAGTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAFYLLL*FESKSL
Trigger: AAGGCTCTTACTCTCAAATCACAGAAGCAAGTAAAA...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTTCCCACACCAGGATaGGAATCACAATCACTGCAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLPTPG*ESQSLQ
Trigger: CTGCAGTGATTGTGATTCTCATCCTGGTGTGGGAAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACACACCGGCGATTGGTaGGCGTGCCGTATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPHTGDW*ACRISS
Trigger: TGAGGAAATACGGCACGCTCACCAATCGCCGGTGTG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGCTGGGACTGCTGCATaGCTGGTCCTGAAAGTCGCA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFAGTAA*LVLKVA
Trigger: TGCGACTTTCAGGACCAGTCATGCAGCAGTCCCAGC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTCATGAAGAGAGCTGTTaGACATGCCCGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVHEESC*TCPELH
Trigger: GTGCAGCTCCGGGCATGTTCAACAGCTCTCTTCATG...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAGGTAAGTGGGCTCTaGAGTTTCATGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQVSGL*SFMWLS
Trigger: GCTGAGCCACATGAAACTTCAGAGCCCACTTACCTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTCTTTTGTTGCTGGTaGGCTGAGGTTTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLFCCW*AEVFPT
Trigger: GGTGGGAAAAACCTCAGCTCACCAGCAACAAAAGAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGGCTGCCCTCTAGTTaGATTTGCTCTTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSRLPSS*ICSSWI
Trigger: GATCCAGGAAGAGCAAATTCAACTAGAGGGCAGCCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGACTCGTCCCTCAGCCTTaGAGCAATCCAGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGLVPQP*SNPAVA
Trigger: TGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAG...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGGCCATCCACAAGGCTaGCCTCTAGTTGAATTCAGC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAGHPQG*PLVEFS
Trigger: GCTGAATTCAACTAGAGGGCAGCCTTGTGGATGGCC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265149.9
ENST00000380013.9
CDS-3UTR GCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCATGGACTTAGTCTGTTaGCCTCAACATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPMDLVC*PQHGWF
Trigger: GAACCAACCATGTTGAGGGCAACAGACTAAGTCCAT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAAGACATTTGGTTGACTaGTTTCACCTGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLARHLVD*FHLDFF
Trigger: AAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCT...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTGTGCGGAATTGATCTaGCCTGAGGTATGCGATGGG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPACAELI*PEVCDG
Trigger: CCCATCGCATACCTCAGGGCAGATCAATTCCGCACA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGGCCTCACTCACCACTaGAGCTGGCTTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAGLTHH*SWLWRQ
Trigger: CTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGGCCTCACTCACCACTaGAGCTGGCTTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLGLTHH*SWLWRQ
Trigger: CTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCTGCCACCAGGAGCTTaGAAATTGCTGCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPALPPGA*KLLLEP
Trigger: AGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCTGGTGGTGCTGTGTaGATACAGGCATGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASGGAV*IQACGL
Trigger: CAAGCCACATGCCTGTATGCACACAGCACCACCAGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTCAATGATGCTCTTTTaGTGCACATTATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVSMMLF*CTLSQL
Trigger: AAGCTGTGATAATGTGCAGCAAAAGAGCATCATTGA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGCTTCTCTTCACTGCTaGTTCTGCGAACCACCCACT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAASLHC*FCEPPT
Trigger: AGTGGGTGGTTCGCAGAAGCAGCAGTGAAGAGAAGC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTGGCTGCTGGGACTGCTaGATGACTGGTCCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVGCWDC*MTGPES
Trigger: ACTTTCAGGACCAGTCATGCAGCAGTCCCAGCAGCC...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTCTCATCGTTGTCCTCTaGACCAGAAGCCACACCCTG +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLLIVVL*TRSHTL
Trigger: CAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAG...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGTGACCTTTCCCCACTaGCCACGTCATGAGAACTAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSVTFPH*PRHENY
Trigger: ATAGTTCTCATGACGTGGGCAGTGGGGAAAGGTCAC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTGGCCAACAGCCACTTaGCAAACTCCTGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSWPTAT*QTPALQ
Trigger: TTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCTATCAAACAGCATTaGATGCTACAGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAAIKQH*MLQRNL
Trigger: AAGATTTCTCTGTAGCATGCAATGCTGTTTGATAGC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCCACCCCCAGAATATTaGTTGGTTTATTGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPPPPEY*LVYCQG
Trigger: TCCTTGACAATAAACCAAGCAATATTCTGGGGGTGG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGGCCATCCACAAGGCTaGCCTCTAGTTGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSGHPQG*PLVEFA
Trigger: AGCAAATTCAACTAGAGGGCAGCCTTGTGGATGGCC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGTGGGCTTCCATTCTaGAGCTTTGTAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSGLPF*SFVARG
Trigger: ACCTCTGGCTACAAAGCTCCAGAATGGAAGCCCACT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGCTCTCTCAGGCAGTaGGCTTCCATTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASSLRQ*ASILEL
Trigger: AAGCTCCAGAATGGAAGCCCACTGCCTGAGAGAGCT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCAGACGCTAGCTTTGTaGTTCCCTGGATGTTATTTT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPQTLAL*FPGCYF
Trigger: AAAATAACATCCAGGGAACCACAAAGCTAGCGTCTG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAAGGACTCTGGGAAGGTaGTGCCTCAGGTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGRTLGR*CLRFTL
Trigger: GAGGGTAAACCTGAGGCACCACCTTCCCAGAGTCCT...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGATGGATTAGGACTCTaGGAAGGTGGTGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPADGLGL*EGGASG
Trigger: ACCTGAGGCACCACCTTCCCAGAGTCCTAATCCATC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCTTTCTCAGAACACAATaGAACAGTCATTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCFLRTQ*NSHCPC
Trigger: GCAGGGACAATGACTGTTCCATTGTGTTCTGAGAAA...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCATTCCAGTGTATTGTTTaGAGGTCATTTGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAFQCIV*RSFDWR
Trigger: TCTCCAATCAAATGACCTCCAAACAATACACTGGAA...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTGGAACTGGAGATGTTaGTCCACTGTACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSWNWRC*STVPWD
Trigger: GTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTCTTCCACTTTAGTCTaGCCAAAGAATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMASSTLV*PKNDPS
Trigger: AGAAGGATCATTCTTTGGCCAGACTAAAGTGGAAGA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTATCACAGCTTGCAGGTaGATTCTCTTGCTTAGTTAC +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPITACR*ILLLSY
Trigger: GTAACTAAGCAAGAGAATCCACCTGCAAGCTGTGAT...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCGGTCAAATAACGACTTaGCGTGAAACTGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCGQITT*RETASD
Trigger: ATCTGAAGCAGTTTCACGCCAAGTCGTTATTTGACC...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGGCACCACAGGTTTCTaGATCCAGCCCCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAGTTGF*IQPLTG
Trigger: GCCTGTCAGGGGCTGGATCCAGAAACCTGTGGTGCC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTTGGGATCTTGCTTCTaGCAAACTTACATCCATTGT +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMALGSCF*QTYIHC
Trigger: ACAATGGATGTAAGTTTGCCAGAAGCAAGATCCCAA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACCCAGACGGCACTCTaGTGCTCTGTGTTCATATTC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTQTAL*CSVFIF
Trigger: GAATATGAACACAGAGCACCAGAGTGCCGTCTGGGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGCTTCTGTAGAGGCTaGGGCTGCTGGGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEACFCRG*GCWDCC
Trigger: GCAGCAGTCCCAGCAGCCCCAGCCTCTACAGAAGCA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACCAGAAGCCACACCCTaGACTAGTGCCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPPEATP*TSANGC
Trigger: GCAGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGACGAGGGAGATCCTaGTGGGGTGATTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPARRGRS*WGDSYW
Trigger: CCAATAGGAATCACCCCACCAGGATCTCCCTCGTCT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCCCATCTGTGACCACTTaGGAGCCAGTGAAAATTAAG +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPPSVTT*EPVKIK
Trigger: CTTAATTTTCACTGGCTCCCAAGTGGTCACAGATGG...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACACAGGTGACATGTTaGCATAGGGAGAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTQVTC*HRESMS
Trigger: GCTCATGCTCTCCCTATGCCAACATGTCACCTGTGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTCTCAGTACATTTCTaGCACTTACCTACACATCTG +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPVSVHF*HLPTHL
Trigger: CAGATGTGTAGGTAAGTGCCAGAAATGTACTGAGAC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCTTAATGGCATTTATGTaGGATGTGGTTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCLMAFM*DVVFCT
Trigger: GGTGCAGAAAACCACATCTCACATAAATGCCATTAA...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTATGCGATGGGTGAGTaGTCTCACAGGACAACTCAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSYAMGE*SHRTTH
Trigger: ATGAGTTGTCCTGTGAGATCACTCACCCATCGCATA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTACACTGAGCTTTGCTTaGAGTAAGCACCATTCATTT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPTLSFA*SKHHSF
Trigger: AAATGAATGGTGCTTACTTCAAGCAAAGCTCAGTGT...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCTTCACACAATTATTCTaGGGCCTTTCAGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCFTQLF*GLSESI
Trigger: GATGCTTTCTGAAAGGCCTCAGAATAATTGTGTGAA...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTGGTGGGTTATGCTTaGGGTGTTCTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLVGYA*GVLTLV
Trigger: GACCAATGTCAGAACACCTCAAGCATAACCCACCAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTTGGGATTCCGCTTGGTaGAAACGAGGGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLWDSAW*KRGAFN
Trigger: ATTGAAGGCCCCTCGTTTTCACCAAGCGGAATCCCA...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCTAGTGCCACACAGTaGCTGCACATGAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASSATQ*LHMSFW
Trigger: CCAAAAGCTCATGTGCAGTCACTGTGTGGCACTAGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGGTTTTGAGGGAGATGTaGACTCTGGGATGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLVLREM*TLGWLC
Trigger: ACACAACCATCCCAGAGTTCACATCTCCCTCAAAAC...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGATCCTTCTCTTTGCTaGTCATTGTTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSDPSLC*SLLLWG
Trigger: CCCCCAAAGCAACAATGATCAGCAAAGAGAAGGATC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGAGCAGCATGCTTTTaGGTGTCCTTCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRAACF*VSFWGG
Trigger: CCCTCCCCAGAAGGACACTCAAAAGCATGCTGCTCT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAATAACGACTTGGCGTaGAACTGCTTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSNNDLA*NCFRCC
Trigger: GCAGCATCTGAAGCAGTTTCACGCCAAGTCGTTATT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCTTCCCACACCAGGATaGGAATCACAATCACTGCAG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPALPTPG*ESQSLQ
Trigger: CTGCAGTGATTGTGATTCTCATCCTGGTGTGGGAAG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAGTCCAAACATGCAGTaGCCCCTGAGAATGGACGGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFSPNMQ*PLRMDG
Trigger: GCCGTCCATTCTCAGGGGTCACTGCATGTTTGGACT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGCTGGGACTGCTGCATaGCTGGTCCTGAAAGTCGCA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAAGTAA*LVLKVA
Trigger: TGCGACTTTCAGGACCAGTCATGCAGCAGTCCCAGC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACATGAAGAGAGCTGTTaGACATGCCCGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPHEESC*TCPELH
Trigger: GTGCAGCTCCGGGCATGTTCAACAGCTCTCTTCATG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCATGAAGAGAGCTGTTaGACATGCCCGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFHEESC*TCPELH
Trigger: GTGCAGCTCCGGGCATGTTCAACAGCTCTCTTCATG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTATGAGAATTGACCCATaGGTTGGAGCCACGGCCACT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLMRIDP*VGATAT
Trigger: AGTGGCCGTGGCTCCAACTCATGGGTCAATTCTCAT...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGAGATCCTGGTGGGGTaGTTCCTATTGGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSEILVG*FLLGFF
Trigger: AAAGAATCCCAATAGGAATCACCCCACCAGGATCTC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGGCATAGGGAGAGCATaGGCTGAAATATCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSGIGRA*AEISLN
Trigger: ATTCAGGGATATTTCAGCTCATGCTCTCCCTATGCC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCATCTTGCTTCCTTCTaGTTCTCTACGAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSHLASF*FSTKAA
Trigger: GGCTGCTTTCGTAGAGAAGCAGAAGGAAGCAAGATG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265149.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTCGTCCCTCAGCCTTaGAGCAATCCAGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLVPQP*SNPAVA
Trigger: TGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGTGCTGCTGAATGTTTaGCAGCCTCGTTCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPVLLNV*QPRSRP
Trigger: GGGACGAGAACGAGGCTGGCAAACATTCAGCAGCAC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTGTTCCATCAGGCTTaGTTCGGGGCCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLFHQA*FGAIHK
Trigger: CTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTGTTCCATCAGGCTTaGTTCGGGGCCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLFHQA*FGAIHK
Trigger: CTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGCCTCACTCACCACTaGAGCTGGCTTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGLTHH*SWLWRQ
Trigger: CTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCAGGAGCTTGCAAATTaGTGCTGGAACCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSQELAN*CWNLNR
Trigger: TCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGACTGCCACCAGGAGCTTaGAAATTGCTGCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGLPPGA*KLLLEP
Trigger: AGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAG...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACAAGATCTCGTGTTTaGTCCTTGTCTCGACCCTTC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTRSRV*SLSRPF
Trigger: GAAGGGTCGAGACAAGGAGCAAACACGAGATCTTGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAAGAAACCTGTATTTTaGATGCACTTGATTTCATGG +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVKKPVF*MHLISW
Trigger: CCATGAAATCAAGTGCATGCAAAATACAGGTTTCTT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTTTCTTATATGTTGGTaGCATAAGAGTGGACAGGTT +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAFLICW*HKSGQV
Trigger: AACCTGTCCACTCTTATGGCACCAACATATAAGAAA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGCTGCTGGGACTGCTaGATGACTGGTCCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGCWDC*MTGPES
Trigger: ACTTTCAGGACCAGTCATGCAGCAGTCCCAGCAGCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGGGGTCTCTGCTGCTaGTGGGGCTGTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPWGLCC*WGCGGC
Trigger: GCAGCCACCACAGCCCCAGCAGCAGCAGAGACCCCA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCAGTCCATGTTTGGATTaGTCAGATTGGGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPSPCLD*SDWVVI
Trigger: GATTACCACCCAATCTGAGCAATCCAAACATGGACT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTCATCGTTGTCCTCTaGACCAGAAGCCACACCCTG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLIVVL*TRSHTL
Trigger: CAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTCATCGTTGTCCTCTaGACCAGAAGCCACACCCTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLIVVL*TRSHTL
Trigger: CAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGGATCCAGAAAGCTCTaGTCGCTGTCTGACCAGACC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFGSRKL*SLSDQT
Trigger: GGTCTGGTCAGACAGCGAGCAGAGCTTTCTGGATCC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCATCAAACAGCATTGCATaGTACAGAGAAATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLASNSIA*YREIFC
Trigger: ACAAAAGATTTCTCTGTAGCATGCAATGCTGTTTGA...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTCTCGTTGGAGCCTGTaGCAGTACCTTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLSRWSL*QYLVAG
Trigger: GCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTGGATCATGTCCTATTaGCTGCTGCTGAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAWIMSY*LLLSPS
Trigger: AGATGGGCTCAGCAGCAGCCAATAGGACATGATCCA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGCCTTACTGCTCTTCCTaGATCATGTCCTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLPYCSS*IMSYWL
Trigger: CAGCCAATAGGACATGATCCAGGAAGAGCAGTAAGG...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGTTCTGTCTGGCAAATaGGAGGTGATGGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSVLSGK*EVMVSG
Trigger: TCCTGATACCATCACCTCCCATTTGCCAGACAGAAC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGTCTCCATTTACTTCTaGATGAGCTCTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSVSIYF*MSSLRQ
Trigger: CTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGAC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTCACACGACTATTCTaGCTTCCCTTCATACAGGGT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLTRLF*LPFIQG
Trigger: ACCCTGTATGAAGGGAAGCCAGAATAGTCGTGTGAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCACATTTTGCAAACACTTaGAATACCCTCTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: KARVGPLVGACASTLWLAHFANT*NTLYFL
Trigger: AAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATG...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTTTGACTGCTTTCACCTaGATTTCTTTCTTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPLTAFT*ISFLAY
Trigger: GTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAA...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAACTCACCACTGCAGCTaGCTTTGGAGGCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPTHHCS*LWRQLR
Trigger: TCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCTTGCAAATTGCTGCTaGAACCTGAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPLANCC*NLNRIL
Trigger: AAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAGGACTCTGGGAAGGTaGTGCCTCAGGTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFRTLGR*CLRFTL
Trigger: GAGGGTAAACCTGAGGCACCACCTTCCCAGAGTCCT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGGACTCTGGGAAGGTaGTGCCTCAGGTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRTLGR*CLRFTL
Trigger: GAGGGTAAACCTGAGGCACCACCTTCCCAGAGTCCT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTGATGGATTAGGACTCTaGGAAGGTGGTGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLDGLGL*EGGASG
Trigger: ACCTGAGGCACCACCTTCCCAGAGTCCTAATCCATC...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAGATAGTGCTGTGTTaGGGGCACAAGATCTCGTGT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQIVLC*GHKISC
Trigger: ACACGAGATCTTGTGCCCCCAACACAGCACTATCTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTGGAACTGGAGATGTTaGTCCACTGTACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAWNWRC*STVPWD
Trigger: GTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTGGTGTGAGGGTTTTTaGAACTGGAGATGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSWCEGF*NWRCWS
Trigger: GGACCAACATCTCCAGTTCCAAAAACCCTCACACCA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTGGAGAAGTGCACCTaGTGTGAGGGTTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLEKCT*CEGFWN
Trigger: GTTCCAAAAACCCTCACACCAGGTGCACTTCTCCAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCTGTTTCAACACTaGGGACATAAGTTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPVLFQH*GHKFFS
Trigger: ACTGAAAAACTTATGTCCCCAGTGTTGAAACAGCAC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTGTGCATACAGGCATGTaGCTTGCATCCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVVHTGM*LASRFH
Trigger: GTGGAACCTGGATGCAAGCCACATGCCTGTATGCAC...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTCTAAAGCTGGGGTGTaGCTATCAAGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSKAGV*LSSSAA
Trigger: TGCTGCAGAACTTGATAGCCACACCCCAGCTTTAGA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGCACCACAGGTTTCTaGATCCAGCCCCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGTTGF*IQPLTG
Trigger: GCCTGTCAGGGGCTGGATCCAGAAACCTGTGGTGCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCACCCAGACGGCACTCTaGTGCTCTGTGTTCATATTC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPATQTAL*CSVFIF
Trigger: GAATATGAACACAGAGCACCAGAGTGCCGTCTGGGT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGCTTCTGTAGAGGCTaGGGCTGCTGGGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKCFCRG*GCWDCC
Trigger: GCAGCAGTCCCAGCAGCCCCAGCCTCTACAGAAGCA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCCAGAAGCCACACCCTaGACTAGTGCCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAPEATP*TSANGC
Trigger: GCAGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTCTTTAAAGGGGTTGTaGCATGCAGCTCACGCTTTG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSLKGL*HAAHAL
Trigger: CAAAGCGTGAGCTGCATGCCACAACCCCTTTAAAGA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTGAGGCACATAGTCTaGGCCATACTTTTCACACTC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLRHIV*AILFTL
Trigger: GAGTGTGAAAAGTATGGCCCAGACTATGTGCCTCAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTCTGTGGTCACGGACATaGTCCTTTCGGCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLLWSRT*SFRQET
Trigger: AGTCTCTTGCCGAAAGGACCATGTCCGTGACCACAG...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTACTGTGGAGTCTGTaGTCACGGACATGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLLWSL*SRTWSF
Trigger: AAAGGACCATGTCCGTGACCACAGACTCCACAGTAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTTTGCATAGAATGCTTTaGTCTTTTCCTAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMALHRML*SFPRCH
Trigger: ATGGCATCTAGGAAAAGACCAAAGCATTCTATGCAA...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCACACAGGTGACATGTTaGCATAGGGAGAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPATQVTC*HRESMS
Trigger: GCTCATGCTCTCCCTATGCCAACATGTCACCTGTGT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGACATTTAAAGCTAACTaGAAGCCTACCTATTACTTG +
Preference number: 4 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVTFKAN*KPTYYL
Trigger: CAAGTAATAGGTAGGCTTCCAGTTAGCTTTAAATGT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCCAGTACCTTGTGGCTaGCAGCCTGGCTGGCCGATT +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSPVPCG*QPGWPI
Trigger: AATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAAGTGGGAAAGCCAGAGTaGGACCTCTCGTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: WIRAKYIESLLERYHHLEVGKPE*DLSLEP
Trigger: AGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCAC...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCGGGTCTCCACCCCTaGGAGAAGAAGCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKAGLHP*EKKQSK
Trigger: CTTGCTCTGCTTCTTCTCCCAGGGGTGGAGACCCGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
3UTR CAA 72 bp GCTTTCTTGGCTTCTAGTTTCCTTTGTCGGCAAGTCTaGACTGGCTCTGCTAACATCCTGACTTTTCGCCGA +
Preference number: 4 (lower is better)
Translates to: AFLASSFLCRQV*TGSANILTFRR
Trigger: TCGGCGAAAAGTCAGGATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAAGGAAACTAGAAGCCAAGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACCATTTACTTCTGGATaGGCTCTCTCAGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPPFTSG*ALSGSG
Trigger: CCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCCATTTACTTCTGGATaGGCTCTCTCAGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFPFTSG*ALSGSG
Trigger: CCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTAACTCATTAGTAGCCTaGCTGTTAATGGCATTTATG +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPNSLVA*LLMAFM
Trigger: CATAAATGCCATTAACAGTCAGGCTACTAATGAGTT...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTATGCGATGGGTGAGTaGTCTCACAGGACAACTCAT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAYAMGE*SHRTTH
Trigger: ATGAGTTGTCCTGTGAGATCACTCACCCATCGCATA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGAGGTATGCGATGGGTaGGTGATCTCACAGGACAAC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPEVCDG*VISQDN
Trigger: GTTGTCCTGTGAGATCACTCACCCATCGCATACCTC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGGAATTGATCTGCCCTaGGGTATGCGATGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFGIDLP*GMRWVS
Trigger: ACTCACCCATCGCATACCTCAGGGCAGATCAATTCC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACAGGTCTGTGCGGAATTaGTCTGCCCTGAGGTATGCG +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYRSVRN*SALRYA
Trigger: CGCATACCTCAGGGCAGATCAATTCCGCACAGACCT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTATTGCTGCTGGAACCTaGACAGAATTCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSIAAGT*TEFFTR
Trigger: TCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAAT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCCTTCTGAAGGAAGCTaGGGAACCTGTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFPSEGS*GTCGRG
Trigger: TCCTCTTCCACAGGTTCCTCAGCTTCCTTCAGAAGG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACCTTCTGAAGGAAGCTaGGGAACCTGTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPPSEGS*GTCGRG
Trigger: TCCTCTTCCACAGGTTCCTCAGCTTCCTTCAGAAGG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCCTTGGGACTGCCCTTaGTTCATTTCAACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAPWDCP*FISTWY
Trigger: GTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCACAGTGACTGCACATaGGCTTTTGGTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSHSDCT*AFGKWS
Trigger: AGACCATTTACCAAAAGCTCATGTGCAGTCACTGTG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGGTCTCTGAAGCCTGTTaGTTCAAGTGCTGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLVSEAC*FKCCFN
Trigger: GTTGAAACAGCACTTGAATCAACAGGCTTCAGAGAC...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGTCTGGCCAAAGAATaGTCCTTCTCTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSLAKE*SFSLLI
Trigger: GATCAGCAAAGAGAAGGATCATTCTTTGGCCAGACT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCCCATTTGGACATTATaGGTCTCGAACTCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSPIWTL*VSNSLD
Trigger: ATCAAGCGAGTTCGAGACTCATAATGTCCAAATGGG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCATTGGCCTGTGCATCTaGCTATGGCAAGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAIGLCI*LWQDSV
Trigger: AACTGAGTCTTGCCATAGTCAGATGCACAGGCCAAT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGCTCCATGGTCTCAATaGTGCTCTTTTGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAAPWSQ*CSFAAH
Trigger: ATGTGCAGCAAAAGAGCATCATTGAGACCATGGAGC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGGGTTGGTGTCTTTTCTaGAGAAGTTGTTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLGWCLF*RSCLLL
Trigger: GAGCAGCAAACAACTTCTTCAGAAAAGACACCAACC...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGGTTGGTGTCTTTTCTaGAGAAGTTGTTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSGWCLF*RSCLLL
Trigger: GAGCAGCAAACAACTTCTTCAGAAAAGACACCAACC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGTCCAAACATGCAGTaGCCCCTGAGAATGGACGGC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASPNMQ*PLRMDG
Trigger: GCCGTCCATTCTCAGGGGTCACTGCATGTTTGGACT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTATAAAGGCAGAACGTaGAGCTGCTCATCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAYKGRT*SCSSSG
Trigger: ACCTGAGGATGAGCAGCTTCACGTTCTGCCTTTATA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGCTCTGCTAACATCCTaGCTTTTCGCCGAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAALLTS*LFAEKN
Trigger: GTTCTTTTCGGCGAAAAGTCAGGATGTTAGCAGAGC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCTGGGACTGCTGCATaGCTGGTCCTGAAAGTCGCA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKAGTAA*LVLKVA
Trigger: TGCGACTTTCAGGACCAGTCATGCAGCAGTCCCAGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAAGCAGAATAAGAGTTaGCAGACTCTGTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSKQNKS*QTLSEG
Trigger: ACCCTCAGACAGAGTCTGTCAACTCTTATTCTGCTT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATGAGAATTGACCCATaGGTTGGAGCCACGGCCACT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPMRIDP*VGATAT
Trigger: AGTGGCCGTGGCTCCAACTCATGGGTCAATTCTCAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTATGAGAATTGACCCATaGGTTGGAGCCACGGCCACT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFMRIDP*VGATAT
Trigger: AGTGGCCGTGGCTCCAACTCATGGGTCAATTCTCAT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGCTTTGCACACTCAATaGGAATTGACCCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSALHTQ*ELTHEL
Trigger: CAACTCATGGGTCAATTCTCATTGAGTGTGCAAAGC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGAGATCCTGGTGGGGTaGTTCCTATTGGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAEILVG*FLLGFF
Trigger: AAAGAATCCCAATAGGAATCACCCCACCAGGATCTC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCAGGTAAGTGGGCTCTaGAGTTTCATGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFQVSGL*SFMWLS
Trigger: GCTGAGCCACATGAAACTTCAGAGCCCACTTACCTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCAGCACCATCATGATGTaGATTCTGCTTCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPSTIMM*ILLQTH
Trigger: ATGAGTTTGAAGCAGAATTCACATCATGATGGTGCT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTCGTCCCTCAGCCTTaGAGCAATCCAGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALVPQP*SNPAVA
Trigger: TGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGGCCATCCACAAGGCTaGCCTCTAGTTGAATTCAGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFGHPQG*PLVEFS
Trigger: GCTGAATTCAACTAGAGGGCAGCCTTGTGGATGGCC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265149.9
ENST00000380013.9
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCTGTTCCATCAGGCTTaGTTCGGGGCCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLLFHQA*FGAIHK
Trigger: CTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGTGCGGAATTGATCTaGCCTGAGGTATGCGATGGG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFCAELI*PEVCDG
Trigger: CCCATCGCATACCTCAGGGCAGATCAATTCCGCACA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTGGCCTCACTCACCACTaGAGCTGGCTTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: DKAAAQFERTESNFQRNSGLTHH*SWLWRQ
Trigger: CTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCC...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAGGAGCTTGCAAATTaGTGCTGGAACCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQELAN*CWNLNR
Trigger: TCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCAAAATTGGTGGGTTATaGTTGAGGTGTTCTGACATT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCKIGGL*LRCSDI
Trigger: AATGTCAGAACACCTCAAGCATAACCCACCAATTTT...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTGTTTCTCATCAACTaGTGGCAGTTGTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLFLIN*WQLSCS
Trigger: GCTACAGGACAACTGCCAGCAGTTGATGAGAAACAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGTTTGCTGCTGTTCTTaGTTCTGTAAGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSVCCCS*FCKRCH
Trigger: GTGGCATCTCTTACAGAAGCAAGAACAGCAGCAAAC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTCTGGTGGTGCTGTGTaGATACAGGCATGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFSGGAV*IQACGL
Trigger: CAAGCCACATGCCTGTATGCACACAGCACCACCAGA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGAAGAAGTTGTTTGCTaGTCTAAAGCTGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAEEVVC*SKAGVW
Trigger: CCACACCCCAGCTTTAGAGCAGCAAACAACTTCTTC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGCTTCTCTTCACTGCTaGTTCTGCGAACCACCCACT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFASLHC*FCEPPT
Trigger: AGTGGGTGGTTCGCAGAAGCAGCAGTGAAGAGAAGC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGGATCCAGAAAGCTCTaGTCGCTGTCTGACCAGACC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAGSRKL*SLSDQT
Trigger: GGTCTGGTCAGACAGCGAGCAGAGCTTTCTGGATCC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTGTGACCTTTCCCCACTaGCCACGTCATGAGAACTAT +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVVTFPH*PRHENY
Trigger: ATAGTTCTCATGACGTGGGCAGTGGGGAAAGGTCAC...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCGAAGAGTTGTATGCCTaGCACTTTAAATCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCEELYA*HFKSKA
Trigger: AGCTTTTGATTTAAAGTGGCAGGCATACAACTCTTC...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGTGCCCTCAACATGGTTaGTTCTATCCTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: HPSTQCGVSHCKRENMARCPQHG*FYPVPS
Trigger: TGATGGAACAGGATAGAACCAACCATGTTGAGGGCA...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGCCAGAGGTTCTGTCTaGCAAATGGGAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPARGSV*QMGGDG
Trigger: ACCATCACCTCCCATTTGCCAGACAGAACCTCTGGC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCTTTTCTGCACCGCAATaGAAACACAATCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCFSAPQ*KHNLDN
Trigger: ATTATCCAGATTGTGTTTCCATTGCGGTGCAGAAAA...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCACTGCAGCTGGCTTTaGAGGCAGCTCAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFHCSWL*RQLRVR
Trigger: TCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGCATACATGTGTAGATaGATTAGGACTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSAYMCR*IRTLGR
Trigger: CCTTCCCAGAGTCCTAATCCATCTACACATGTATGC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCGTGCTGTTTCAACACTaGGGACATAAGTTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPVLFQH*GHKFFS
Trigger: ACTGAAAAACTTATGTCCCCAGTGTTGAAACAGCAC...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGGGAGATGTGAACTCTaGGATGGTTGTGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAGRCEL*DGCVCA
Trigger: AGCACAAACACAACCATCCCAGAGTTCACATCTCCC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTTGGCAAGACTCAGTTTaGGGTTGCTGTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVWQDSV*GCCVCC
Trigger: GCAGCAAACACAGCAACCCCAAACTGAGTCTTGCCA...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGGTTCCACCTTAATTaGCCTGTGCATCTGACTATG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSRFHLN*PVHLTM
Trigger: CATAGTCAGATGCACAGGCCAATTAAGGTGGAACCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCTAAAGCTGGGGTGTaGCTATCAAGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASKAGV*LSSSAA
Trigger: TGCTGCAGAACTTGATAGCCACACCCCAGCTTTAGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTTCTCTTCCTCTTTTaGGTCATCCCCAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSFLFLF*VIPKQL
Trigger: AAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGGCCGTCTCATGTATaGATTGGTGGATCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGPSHV*IGGSRS
Trigger: GCTTCTGGATCCACCAATCCATACATGAGACGGCCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTGGATAAGGACTAACTaGATTGGGCCGTCTCATGTA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSWIRTN*IGPSHV
Trigger: TACATGAGACGGCCCAATCCAGTTAGTCCTTATCCA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCATCCATCTCATGAGTaGGATAAGGAGGCAATTTCC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSHPSHE*DKEAIS
Trigger: GGAAATTGCCTCCTTATCCCACTCATGAGATGGATG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACCAGAAGCCACACCCTaGACTAGTGCCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKPEATP*TSANGC
Trigger: GCAGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCTTTAAAGGGGTTGTaGCATGCAGCTCACGCTTTG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASLKGL*HAAHAL
Trigger: CAAAGCGTGAGCTGCATGCCACAACCCCTTTAAAGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACGAGGGAGATCCTGGTaGGGTGATTCCTATTGGGAT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRGRSW*GDSYWD
Trigger: ATCCCAATAGGAATCACCCCACCAGGATCTCCCTCG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGACGAGGGAGATCCTaGTGGGGTGATTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRRGRS*WGDSYW
Trigger: CCAATAGGAATCACCCCACCAGGATCTCCCTCGTCT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACTGTGGAGTCTGTaGTCACGGACATGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPALLWSL*SRTWSF
Trigger: AAAGGACCATGTCCGTGACCACAGACTCCACAGTAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCCATCTGTGACCACTTaGGAGCCAGTGAAAATTAAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSPSVTT*EPVKIK
Trigger: CTTAATTTTCACTGGCTCCCAAGTGGTCACAGATGG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTACAAGTAAGTCTCTaGCCAACAGCCACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLQVSL*PTATCQ
Trigger: TTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGTGTGCCAGTACCTTGTaGCTGGCAGCCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVCASTL*LAAWLA
Trigger: GGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACA...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGAGTGGGACCTCTCGTTaGAGCCTGTGCCAGTACCTT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLSGTSR*SLCQYL
Trigger: AAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCTTTAGAAAAGGAGGCTaGCAAATAGTTAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCFRKGG*QIVSIQ
Trigger: CTGGATACTAACTATTTGCCAGCCTCCTTTTCTAAA...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGCAAGCGCGAAGGTTaGGGGCGAGGTGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSKREG*GRGGRL
Trigger: CAACCTCCCACCTCGCCCCCAACCTTCGCGCTTGCT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTATTCATAAGGCAGTTTaGCGTCTGTTCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSIHKAV*RLFSSL
Trigger: GAGTGATGAGAACAGACGTCAAACTGCCTTATGAAT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265149.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCCATTTACTTCTGGATaGGCTCTCTCAGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAPFTSG*ALSGSG
Trigger: CCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCTTCCATAATAACTTTTaGAAGAGTGCCACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPFHNNF*KSATWC
Trigger: ACACCAAGTGGCACTCTTTCAAAAGTTATTATGGAA...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCGGAGACATTTGGTTaGCTGCTTTCACCTGGATTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASETFG*LLSPGF
Trigger: AAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTGCTCATTCAGAATCTaGAGCTCTGGATTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPACSFRI*SSGFSG
Trigger: GCCTGAAAATCCAGAGCTTCAGATTCTGAATGAGCA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAGGTCTGTGCGGAATTaGTCTGCCCTGAGGTATGCG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKRSVRN*SALRYA
Trigger: CGCATACCTCAGGGCAGATCAATTCCGCACAGACCT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGGGATTCCGCTTGGTaGAAACGAGGGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAWDSAW*KRGAFN
Trigger: ATTGAAGGCCCCTCGTTTTCACCAAGCGGAATCCCA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGAAGTGCACCTGGTGTaGGGGTTTTTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAEVHLV*GFLELE
Trigger: CTCCAGTTCCAAAAACCCTCACACCAGGTGCACTTC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCACAGTGACTGCACATaGGCTTTTGGTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAHSDCT*AFGKWS
Trigger: AGACCATTTACCAAAAGCTCATGTGCAGTCACTGTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTCTAGTGCCACACAGTaGCTGCACATGAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFSSATQ*LHMSFW
Trigger: CCAAAAGCTCATGTGCAGTCACTGTGTGGCACTAGA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAAATGGCTCAGTCTCTaGAGCCTGTTGATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAKWLSL*SLLIQV
Trigger: CACTTGAATCAACAGGCTTCAGAGACTGAGCCATTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGTCTGGCCAAAGAATaGTCCTTCTCTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASLAKE*SFSLLI
Trigger: GATCAGCAAAGAGAAGGATCATTCTTTGGCCAGACT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCCCATTTGGACATTATaGGTCTCGAACTCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAPIWTL*VSNSLD
Trigger: ATCAAGCGAGTTCGAGACTCATAATGTCCAAATGGG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGTTGCGCAGCTTGTTaGCCAGACATATCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASCAAC*PDISWF
Trigger: AAACCAAGATATGTCTGGTCAACAAGCTGCGCAACT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTATCAAGTACCTTTGCTaGGCAAGTTGCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLIKYLC*ASCAAC
Trigger: ACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTGAT...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAGAGCAGCATGCTTTTaGGTGTCCTTCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKRAACF*VSFWGG
Trigger: CCCTCCCCAGAAGGACACTCAAAAGCATGCTGCTCT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAAGAGCAGCATGCTTTTaGGTGTCCTTCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKRAACF*VSFWGG
Trigger: CCCTCCCCAGAAGGACACTCAAAAGCATGCTGCTCT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTGCTCCATGGTCTCAATaGTGCTCTTTTGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLAPWSQ*CSFAAH
Trigger: ATGTGCAGCAAAAGAGCATCATTGAGACCATGGAGC...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGCAATAGGACATCCCTaGGAACTTTTGCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSAIGHP*ELLPSL
Trigger: TAAAGAAGGCAAAAGTTCTCAGGGATGTCCTATTGC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCAGGTTTCCATTGCATTaGTATGATGGATATTGGGTA +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPRFPLH*YDGYWV
Trigger: TACCCAATATCCATCATATCAATGCAATGGAAACCT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCATGAGAATTGACCCATaGGTTGGAGCCACGGCCACT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAMRIDP*VGATAT
Trigger: AGTGGCCGTGGCTCCAACTCATGGGTCAATTCTCAT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCAGGTAAGTGGGCTCTaGAGTTTCATGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAQVSGL*SFMWLS
Trigger: GCTGAGCCACATGAAACTTCAGAGCCCACTTACCTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGATTGTTGCTGGTGAGCTaGGGTTTTTCCCACCACATT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGLLLVS*GFSHHI
Trigger: AATGTGGTGGGAAAAACCTCAGCTCACCAGCAACAA...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTCTTTTGTTGCTGGTaGGCTGAGGTTTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLFCCW*AEVFPT
Trigger: GGTGGGAAAAACCTCAGCTCACCAGCAACAAAAGAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGGCTGCCCTCTAGTTaGATTTGCTCTTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRLPSS*ICSSWI
Trigger: GATCCAGGAAGAGCAAATTCAACTAGAGGGCAGCCT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCAGCAATCCAGCAGTTaGAGTCGGGTCTCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFQQSSS*SRVSFL
Trigger: TAGAAAGGAGACCCGACTGCAACTGCTGGATTGCTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGTGCTGCTGAATGTTTaGCAGCCTCGTTCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKVLLNV*QPRSRP
Trigger: GGGACGAGAACGAGGCTGGCAAACATTCAGCAGCAC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCTGTTCCATCAGGCTTaGTTCGGGGCCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSLFHQA*FGAIHK
Trigger: CTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTGTGCGGAATTGATCTaGCCTGAGGTATGCGATGGG +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLCAELI*PEVCDG
Trigger: CCCATCGCATACCTCAGGGCAGATCAATTCCGCACA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTGCCACCAGGAGCTTaGAAATTGCTGCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALPPGA*KLLLEP
Trigger: AGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTCCTGTAGCTCTCCACTaGTACCAAAAATTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVPVALH*YQKLVG
Trigger: ACCCACCAATTTTTGGTAGCAGTGGAGAGCTACAGG...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTACAAGATCTCGTGTTTaGTCCTTGTCTCGACCCTTC +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVTRSRV*SLSRPF
Trigger: GAAGGGTCGAGACAAGGAGCAAACACGAGATCTTGT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTAAGAAACCTGTATTTTaGATGCACTTGATTTCATGG +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPKKPVF*MHLISW
Trigger: CCATGAAATCAAGTGCATGCAAAATACAGGTTTCTT...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCTCAATGATGCTCTTTTaGTGCACATTATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPSMMLF*CTLSQL
Trigger: AAGCTGTGATAATGTGCAGCAAAAGAGCATCATTGA...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAACTGCTTCAGATGCTaGTCCATGGTCTCAATGATG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPANCFRC*SMVSMM
Trigger: CATCATTGAGACCATGGAGCAGCATCTGAAGCAGTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGTGGCTATCAAGTTCTaGAGCAGTGGTTTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAVAIKF*SSGLSS
Trigger: ACTAGACAAACCACTGCTGCAGAACTTGATAGCCAC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTGAAGAAGTTGTTTGCTaGTCTAAAGCTGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLEEVVC*SKAGVW
Trigger: CCACACCCCAGCTTTAGAGCAGCAAACAACTTCTTC...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGTAGCTTCTCTTCACTaGTGCTTCTGCGAACCACCC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAVASLH*CFCEPP
Trigger: GGGTGGTTCGCAGAAGCAGCAGTGAAGAGAAGCTAC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGAGAATCACAATCACTaGAGCCTCACAGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAENHNH*SLTGVA
Trigger: GGCCACACCTGTGAGGCTGCAGTGATTGTGATTCTC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACTTCCTTGGGATCTTaGTTCTGGCAAACTTACATC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTSLGS*FWQTYI
Trigger: GATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGAGTGCATACCAATGTaGTGCCATTCTGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAECIPM*CHSACC
Trigger: ACAACATGCAGAATGGCAGCACATTGGTATGCACTC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGAACATGCCCGGAGCTaGACTGTAGTTATGGATTAT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAEHARS*TVVMDY
Trigger: ATAATCCATAACTACAGTGCAGCTCCGGGCATGTTC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGATCCAGAAAGCTCTaGTCGCTGTCTGACCAGACC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGSRKL*SLSDQT
Trigger: GGTCTGGTCAGACAGCGAGCAGAGCTTTCTGGATCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTATGCAGGCATCAGTCTaGTCAATCCTCTTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSMQASV*SILLLK
Trigger: CTTTAACAAGAGGATTGAGCAGACTGATGCCTGCAT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGGCCAACAGCCACTTaGCAAACTCCTGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFWPTAT*QTPALQ
Trigger: TTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGGAGCTCCGATGGAGATaGACAAGATTAATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLELRWR*TRLMLF
Trigger: AAACAGCATTAATCTTGTGCATCTCCATCGGAGCTC...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGATTTCTCTAATAGCTaGCACATTAGGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPADFSNS*HIRTCS
Trigger: GGAGCAGGTCCTAATGTGGCAGCTATTAGAGAAATC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGGCCATCCACAAGGCTaGCCTCTAGTTGAATTCTCG +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLGHPQG*PLVEFS
Trigger: CGAGAATTCAACTAGAGGGCAGCCTTGTGGATGGCC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413648.2
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGCCATCCACAAGGCTaGCCTCTAGTTGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGHPQG*PLVEFA
Trigger: AGCAAATTCAACTAGAGGGCAGCCTTGTGGATGGCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTGTTCTGTCTGGCAAATaGGAGGTGATGGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLVLSGK*EVMVSG
Trigger: TCCTGATACCATCACCTCCCATTTGCCAGACAGAAC...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGCCAGAGGTTCTGTCTaGCAAATGGGAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLARGSV*QMGGDG
Trigger: ACCATCACCTCCCATTTGCCAGACAGAACCTCTGGC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGTGGGCTTCCATTCTaGAGCTTTGTAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSGLPF*SFVARG
Trigger: ACCTCTGGCTACAAAGCTCCAGAATGGAAGCCCACT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACAGCTCTCTCAGGCAGTaGGCTTCCATTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYSSLRQ*ASILEL
Trigger: AAGCTCCAGAATGGAAGCCCACTGCCTGAGAGAGCT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCATTTTGCAAACACTTaGAATACCCTCTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPHFANT*NTLYFL
Trigger: AAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCTTAACTGCATTTTCTTaGGCTACAGAACTCACAGAT +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPLTAFS*ATELTD
Trigger: ATCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAA...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTCAGAATCTGAAGCTCTaGATTTTCAGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLQNLKL*IFRPTA
Trigger: TGCAGTGGGCCTGAAAATCCAGAGCTTCAGATTCTG...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCACTGCAGCTGGCTTTaGAGGCAGCTCAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAHCSWL*RQLRVR
Trigger: TCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCACTGCAGCTGGCTTTaGAGGCAGCTCAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLHCSWL*RQLRVR
Trigger: TCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATACTCACCACTGCAGCTaGCTTTGGAGGCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: KETLGALRVSALSFPPTHTHHCS*LWRQLR
Trigger: TCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGT...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGATGGATTAGGACTCTaGGAAGGTGGTGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEADGLGL*EGGASG
Trigger: ACCTGAGGCACCACCTTCCCAGAGTCCTAATCCATC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTTCTCAGAACACAATaGAACAGTCATTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSFLRTQ*NSHCPC
Trigger: GCAGGGACAATGACTGTTCCATTGTGTTCTGAGAAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGGCTACCAAAAATTGGTaGGTTATGCTTGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: HPSTQCGVSHCKRENMARATKNW*VMLEVF
Trigger: GAACACCTCAAGCATAACCCACCAATTTTTGGTAGC...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACTGCTACCAAAAATTaGTGGGTTATGCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTATKN*WVMLEV
Trigger: CACCTCAAGCATAACCCACCAATTTTTGGTAGCAGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACAGATAGTGCTGTGTTaGGGGCACAAGATCTCGTGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPQIVLC*GHKISC
Trigger: ACACGAGATCTTGTGCCCCCAACACAGCACTATCTG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTTTTGATTGGAGAGATTaGGTTGATACTGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPFDWRD*VDTEEL
Trigger: CAATTCTTCAGTATCAACCCAATCTCTCCAATCAAA...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGAGGGTTTTTGGAACTaGAGATGTTGGTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAEGFWN*RCWSTV
Trigger: TACAGTGGACCAACATCTCCAGTTCCAAAAACCCTC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGGCAAGACTCAGTTTaGGGTTGCTGTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFWQDSV*GCCVCC
Trigger: GCAGCAAACACAGCAACCCCAAACTGAGTCTTGCCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGGTTCCACCTTAATTaGCCTGTGCATCTGACTATG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPARFHLN*PVHLTM
Trigger: CATAGTCAGATGCACAGGCCAATTAAGGTGGAACCT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGTGCATACAGGCATGTaGCTTGCATCCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAVHTGM*LASRFH
Trigger: GTGGAACCTGGATGCAAGCCACATGCCTGTATGCAC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGTGCATACAGGCATGTaGCTTGCATCCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLVHTGM*LASRFH
Trigger: GTGGAACCTGGATGCAAGCCACATGCCTGTATGCAC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTATCACAGCTTGCAGGTaGATTCTCTTGCTTAGTTAC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSITACR*ILLLSY
Trigger: GTAACTAAGCAAGAGAATCCACCTGCAAGCTGTGAT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGAGAGTAAGAGCCTTATaGTCAAATAACGACTTGGCG +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLRVRAL*SNNDLA
Trigger: CGCCAAGTCGTTATTTGACCATAAGGCTCTTACTCT...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTTACACATCTGCAAGATaGGAAATCATATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPYTSAR*EIILSL
Trigger: AAGACTCAATATGATTTCCCATCTTGCAGATGTGTA...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCAAGTTTCTTATATGTTaGTGCCATAAGAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPKFLIC*CHKSGQ
Trigger: CTGTCCACTCTTATGGCACCAACATATAAGAAACTT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGCTTCTGTAGAGGCTaGGGCTGCTGGGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPCFCRG*GCWDCC
Trigger: GCAGCAGTCCCAGCAGCCCCAGCCTCTACAGAAGCA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAGAGGGTCTTGGCTTaGATACCTATACAGATCCAT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQRVLA*IPIQIH
Trigger: ATGGATCTGTATAGGTATCCAAGCCAAGACCCTCTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTAGACAGAGGGTCTTaGCTTGGATACCTATACAGA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLDRGS*LGYLYR
Trigger: TCTGTATAGGTATCCAAGCCAAGACCCTCTGTCTAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCTTAGATGTAAAACTCTaGCTATTTCCAAACCTTGGC +
Preference number: 4 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPLDVKL*LFPNLG
Trigger: GCCAAGGTTTGGAAATAGCCAGAGTTTTACATCTAA...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAACCCATTAGCTGTGTaGGAAAGCATGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPANPLAV*ESMSFS
Trigger: GGAGAATGACATGCTTTCCCACACAGCTAATGGGTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGACGAGGGAGATCCTaGTGGGGTGATTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEARRGRS*WGDSYW
Trigger: CCAATAGGAATCACCCCACCAGGATCTCCCTCGTCT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTGTGGTCACGGACATaGTCCTTTCGGCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALWSRT*SFRQET
Trigger: AGTCTCTTGCCGAAAGGACCATGTCCGTGACCACAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCCATCTGTGACCACTTaGGAGCCAGTGAAAATTAAG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAPSVTT*EPVKIK
Trigger: CTTAATTTTCACTGGCTCCCAAGTGGTCACAGATGG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCCAGTACCTTGTGGCTaGCAGCCTGGCTGGCCGATT +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMPVPCG*QPGWPI
Trigger: AATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACGTGGGAAAGCCAGAGTaGGACCTCTCGTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNVGKPE*DLSLEP
Trigger: AGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCAC...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACAGGCTGCCCTCTAGTTaGATTCAGCAGCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNRLPSS*IQQLSP
Trigger: GGGACTGAGCTGCTGAATTCAACTAGAGGGCAGCCT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTCCATTTACTTCTGGATaGGCTCTCTCAGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSPFTSG*ALSGSG
Trigger: CCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGG...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCCATTTACTTCTGGATaGGCTCTCTCAGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSPFTSG*ALSGSG
Trigger: CCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTCAATTTCTTGATCTaGAGGAGCCCAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAFNFLI*RSPERE
Trigger: TTCTCTCTCTGGGCTCCTTCAGATCAAGAAATTGAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTTGCTCATTCAGAATCTaGAGCTCTGGATTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLCSFRI*SSGFSG
Trigger: GCCTGAAAATCCAGAGCTTCAGATTCTGAATGAGCA...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGAGGTATGCGATGGGTaGGTGATCTCACAGGACAAC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKEVCDG*VISQDN
Trigger: GTTGTCCTGTGAGATCACTCACCCATCGCATACCTC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTGGAATTGATCTGCCCTaGGGTATGCGATGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSGIDLP*GMRWVS
Trigger: ACTCACCCATCGCATACCTCAGGGCAGATCAATTCC...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGAATTGATCTGCCCTaGGGTATGCGATGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGIDLP*GMRWVS
Trigger: ACTCACCCATCGCATACCTCAGGGCAGATCAATTCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACAGGTCTGTGCGGAATTaGTCTGCCCTGAGGTATGCG +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNRSVRN*SALRYA
Trigger: CGCATACCTCAGGGCAGATCAATTCCGCACAGACCT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACACTGAGCTTTGCTTaGAGTAAGCACCATTCATTT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTLSFA*SKHHSF
Trigger: AAATGAATGGTGCTTACTTCAAGCAAAGCTCAGTGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACCTTCTGAAGGAAGCTaGGGAACCTGTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKPSEGS*GTCGRG
Trigger: TCCTCTTCCACAGGTTCCTCAGCTTCCTTCAGAAGG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTCACACAATTATTCTaGGGCCTTTCAGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSFTQLF*GLSESI
Trigger: GATGCTTTCTGAAAGGCCTCAGAATAATTGTGTGAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGGTGGGTTATGCTTaGGGTGTTCTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLVGYA*GVLTLV
Trigger: GACCAATGTCAGAACACCTCAAGCATAACCCACCAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTGGTGGGTTATGCTTaGGGTGTTCTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLVGYA*GVLTLV
Trigger: GACCAATGTCAGAACACCTCAAGCATAACCCACCAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAAACTTGGTACATTTGTaGCTTGTGCTCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGNLVHL*LVLQLC
Trigger: ACACAGCTGGAGCACAAGTCACAAATGTACCAAGTT...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACCTTGGGACTGCCCTTaGTTCATTTCAACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPPWDCP*FISTWY
Trigger: GTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTGAAGTGCACCTGGTGTaGGGGTTTTTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSEVHLV*GFLELE
Trigger: CTCCAGTTCCAAAAACCCTCACACCAGGTGCACTTC...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGAAGTGCACCTGGTGTaGGGGTTTTTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKEVHLV*GFLELE
Trigger: CTCCAGTTCCAAAAACCCTCACACCAGGTGCACTTC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGATGTGCTGCCTGTTTATaGGGCTTATGTTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGCAACL*GLCCKR
Trigger: CCTTTTGCAACATAAGCCTCATAAACAGGCAGCACA...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGTTTTGAGGGAGATGTaGACTCTGGGATGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPVLREM*TLGWLC
Trigger: ACACAACCATCCCAGAGTTCACATCTCCCTCAAAAC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGTTTTGAGGGAGATGTaGACTCTGGGATGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFVLREM*TLGWLC
Trigger: ACACAACCATCCCAGAGTTCACATCTCCCTCAAAAC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGATCCTTCTCTTTGCTaGTCATTGTTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFDPSLC*SLLLWG
Trigger: CCCCCAAAGCAACAATGATCAGCAAAGAGAAGGATC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGACCCATTTGGACATTATaGGTCTCGAACTCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGPIWTL*VSNSLD
Trigger: ATCAAGCGAGTTCGAGACTCATAATGTCCAAATGGG...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATTGGCCTGTGCATCTaGCTATGGCAAGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPIGLCI*LWQDSV
Trigger: AACTGAGTCTTGCCATAGTCAGATGCACAGGCCAAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAATAACGACTTGGCGTaGAACTGCTTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFNNDLA*NCFRCC
Trigger: GCAGCATCTGAAGCAGTTTCACGCCAAGTCGTTATT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGATGGGAAATCATATTaGGTCTTGACAGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPADGKSY*VLTGVS
Trigger: GGATACACCTGTCAAGACTCAATATGATTTCCCATC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACACACCGGCGATTGGTaGGCGTGCCGTATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPHTGDW*ACRISS
Trigger: TGAGGAAATACGGCACGCTCACCAATCGCCGGTGTG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTATAAAGGCAGAACGTaGAGCTGCTCATCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFYKGRT*SCSSSG
Trigger: ACCTGAGGATGAGCAGCTTCACGTTCTGCCTTTATA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAAAAGAACTCAGTACCTaGATGGCACCACTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGKELST*MAPLRF
Trigger: AAAACGGAGTGGTGCCATTCAGGTACTGAGTTCTTT...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGCTCTGCTAACATCCTaGCTTTTCGCCGAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFALLTS*LFAEKN
Trigger: GTTCTTTTCGGCGAAAAGTCAGGATGTTAGCAGAGC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTGTCGGCAAGTCTTaGCTGGCTCTGCTAACATCC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAFVGKS*LALLTS
Trigger: GGATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGTTGCTGGTGAGCTaGGGTTTTTCCCACCACATT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLLLVS*GFSHHI
Trigger: AATGTGGTGGGAAAAACCTCAGCTCACCAGCAACAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTCTTTTGTTGCTGGTaGGCTGAGGTTTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALFCCW*AEVFPT
Trigger: GGTGGGAAAAACCTCAGCTCACCAGCAACAAAAGAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTACAGTATAGCATGTaGGATGAGCACCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLQYSM*DEHQKT
Trigger: TGTTTTCTGGTGCTCATCTCACATGCTATACTGTAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGCACCATCATGATGTaGATTCTGCTTCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSTIMM*ILLQTH
Trigger: ATGAGTTTGAAGCAGAATTCACATCATGATGGTGCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGCATAGGGAGAGCATaGGCTGAAATATCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGIGRA*AEISLN
Trigger: ATTCAGGGATATTTCAGCTCATGCTCTCCCTATGCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGGCATAGGGAGAGCATaGGCTGAAATATCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFGIGRA*AEISLN
Trigger: ATTCAGGGATATTTCAGCTCATGCTCTCCCTATGCC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGTGCCAGGCCACTAGATaGTTATTTAGTGAACTTCTA +
Preference number: 4 (lower is better)
Translates to: HPSTQCGVSHCKRENMARCQATR*LFSELL
Trigger: TAGAAGTTCACTAAATAATCATCTAGTGGCCTGGCA...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCATCTTGCTTCCTTCTaGTTCTCTACGAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFHLASF*FSTKAA
Trigger: GGCTGCTTTCGTAGAGAAGCAGAAGGAAGCAAGATG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265149.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCAGCAATCCAGCAGTTaGAGTCGGGTCTCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAQQSSS*SRVSFL
Trigger: TAGAAAGGAGACCCGACTGCAACTGCTGGATTGCTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGTGCGGAATTGATCTaGCCTGAGGTATGCGATGGG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKCAELI*PEVCDG
Trigger: CCCATCGCATACCTCAGGGCAGATCAATTCCGCACA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCTGGATGTTATTTTCTaGAGGAGATGGGCATATCTC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPALDVIF*RRWAYL
Trigger: GAGATATGCCCATCTCCTGCAGAAAATAACATCCAG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACAGGAGCTTGCAAATTaGTGCTGGAACCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPQELAN*CWNLNR
Trigger: TCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAATACCGTTCAGAGCTaGCACCAGGAGCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFNTVQS*HQELAN
Trigger: ATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGACTCTGGGAAGGTGGTaGCTCAGGTTTACCCTCTAT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLTLGRW*LRFTLY
Trigger: ATAGAGGGTAAACCTGAGGCACCACCTTCCCAGAGT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCACTCTGGGAAGGTGGTaGCTCAGGTTTACCCTCTAT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEATLGRW*LRFTLY
Trigger: ATAGAGGGTAAACCTGAGGCACCACCTTCCCAGAGT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACCTGTAGCTCTCCACTaGTACCAAAAATTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPPVALH*YQKLVG
Trigger: ACCCACCAATTTTTGGTAGCAGTGGAGAGCTACAGG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTGTTTGCTGCTGTTCTTaGTTCTGTAAGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLVCCCS*FCKRCH
Trigger: GTGGCATCTCTTACAGAAGCAAGAACAGCAGCAAAC...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCACATTATCACAGCTTaGAGGTGGATTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAHIITA*RWILLL
Trigger: AAGCAAGAGAATCCACCTGCAAGCTGTGATAATGTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTAACTGCTTCAGATGCTaGTCCATGGTCTCAATGATG +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVNCFRC*SMVSMM
Trigger: CATCATTGAGACCATGGAGCAGCATCTGAAGCAGTT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAGTGGCTATCAAGTTCTaGAGCAGTGGTTTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGVAIKF*SSGLSS
Trigger: ACTAGACAAACCACTGCTGCAGAACTTGATAGCCAC...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGAAGAAGTTGTTTGCTaGTCTAAAGCTGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPEEVVC*SKAGVW
Trigger: CCACACCCCAGCTTTAGAGCAGCAAACAACTTCTTC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTTCTGAAGAAGTTGTTTaGTGCTCTAAAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLSEEVV*CSKAGV
Trigger: CACCCCAGCTTTAGAGCAGCAAACAACTTCTTCAGA...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCTTCTCTTCACTGCTaGTTCTGCGAACCACCCACT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKASLHC*FCEPPT
Trigger: AGTGGGTGGTTCGCAGAAGCAGCAGTGAAGAGAAGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGTAGCTTCTCTTCACTaGTGCTTCTGCGAACCACCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKVASLH*CFCEPP
Trigger: GGGTGGTTCGCAGAAGCAGCAGTGAAGAGAAGCTAC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGAGAATCACAATCACTaGAGCCTCACAGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKENHNH*SLTGVA
Trigger: GGCCACACCTGTGAGGCTGCAGTGATTGTGATTCTC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCACTTCCTTGGGATCTTaGTTCTGGCAAACTTACATC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPATSLGS*FWQTYI
Trigger: GATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTCAGACGGCACTCTGGTaGTCTGTGTTCATATTCAAT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLQTALW*SVFIFN
Trigger: ATTGAATATGAACACAGAGCACCAGAGTGCCGTCTG...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGTCCATGTTTGGATTaGTCAGATTGGGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASPCLD*SDWVVI
Trigger: GATTACCACCCAATCTGAGCAATCCAAACATGGACT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAAAGGGGTTGTGGCATaGAGCTCACGCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKKGVVA*SSRFAH
Trigger: GTGTGCAAAGCGTGAGCTGCATGCCACAACCCCTTT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCACTTGCCAAACTCCTaGCTTACAATTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSHLPNS*LTIFPF
Trigger: AAAGGGAAAAATTGTAAGGCAGGAGTTTGGCAAGTG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTCTCGTTGGAGCCTGTaGCAGTACCTTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMSRWSL*QYLVAG
Trigger: GCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAATGGATCATGTCCTATTaGCTGCTGCTGAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: WIRAKYIESLLERYHHLEWIMSY*LLLSPS
Trigger: AGATGGGCTCAGCAGCAGCCAATAGGACATGATCCA...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTGTTGCCCTCAACATaGTTGGTTCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLLPST*LVLSCS
Trigger: GGAACAGGATAGAACCAACCATGTTGAGGGCAACAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTGTTGCCCTCAACATaGTTGGTTCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLLPST*LVLSCS
Trigger: GGAACAGGATAGAACCAACCATGTTGAGGGCAACAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGTTCTGTCTGGCAAATaGGAGGTGATGGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPVLSGK*EVMVSG
Trigger: TCCTGATACCATCACCTCCCATTTGCCAGACAGAAC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCCAGAGGTTCTGTCTaGCAAATGGGAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKARGSV*QMGGDG
Trigger: ACCATCACCTCCCATTTGCCAGACAGAACCTCTGGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGTGGGCTTCCATTCTaGAGCTTTGTAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASGLPF*SFVARG
Trigger: ACCTCTGGCTACAAAGCTCCAGAATGGAAGCCCACT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGTCTCCATTTACTTCTaGATGAGCTCTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFVSIYF*MSSLRQ
Trigger: CTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGAC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTCACACGACTATTCTaGCTTCCCTTCATACAGGGT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLTRLF*LPFIQG
Trigger: ACCCTGTATGAAGGGAAGCCAGAATAGTCGTGTGAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCAGAATCTGAAGCTCTaGATTTTCAGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFQNLKL*IFRPTA
Trigger: TGCAGTGGGCCTGAAAATCCAGAGCTTCAGATTCTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTGCAGCTAGTTTACTaGCATTATCAGCATCATCAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLQLVY*HYQHHQ
Trigger: CTGATGATGCTGATAATGCCAGTAAACTAGCTGCAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAGACGCTAGCTTTGTaGTTCCCTGGATGTTATTTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQTLAL*FPGCYF
Trigger: AAAATAACATCCAGGGAACCACAAAGCTAGCGTCTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAGCATACATGTGTAGATaGATTAGGACTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGAYMCR*IRTLGR
Trigger: CCTTCCCAGAGTCCTAATCCATCTACACATGTATGC...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTTCTCAGAACACAATaGAACAGTCATTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAFLRTQ*NSHCPC
Trigger: GCAGGGACAATGACTGTTCCATTGTGTTCTGAGAAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGATTTCTCATCAACTGCTaGCAGTTGTCCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGFLINC*QLSCSS
Trigger: AGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAA...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGGAACTGGAGATGTTaGTCCACTGTACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAWNWRC*STVPWD
Trigger: GTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTGAGGGTTTTTGGAACTaGAGATGTTGGTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVEGFWN*RCWSTV
Trigger: TACAGTGGACCAACATCTCCAGTTCCAAAAACCCTC...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTGGAGAAGTGCACCTaGTGTGAGGGTTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLEKCT*CEGFWN
Trigger: GTTCCAAAAACCCTCACACCAGGTGCACTTCTCCAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGGAGAAGTGCACCTaGTGTGAGGGTTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLEKCT*CEGFWN
Trigger: GTTCCAAAAACCCTCACACCAGGTGCACTTCTCCAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGGAGATGTGAACTCTaGGATGGTTGTGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGRCEL*DGCVCA
Trigger: AGCACAAACACAACCATCCCAGAGTTCACATCTCCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGGGAGATGTGAACTCTaGGATGGTTGTGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFGRCEL*DGCVCA
Trigger: AGCACAAACACAACCATCCCAGAGTTCACATCTCCC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACTGGCAAGACTCAGTTTaGGGTTGCTGTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYWQDSV*GCCVCC
Trigger: GCAGCAAACACAGCAACCCCAAACTGAGTCTTGCCA...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTGGCAAGACTCAGTTTaGGGTTGCTGTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLWQDSV*GCCVCC
Trigger: GCAGCAAACACAGCAACCCCAAACTGAGTCTTGCCA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAAGCAGCTGTTCTTTTaGTTGGTGTCTTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSKQLFF*LVSFLK
Trigger: CTTCAGAAAAGACACCAACCAAAAGAACAGCTGCTT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTGGGATCTTGCTTCTaGCAAACTTACATCCATTGT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLGSCF*QTYIHC
Trigger: ACAATGGATGTAAGTTTGCCAGAAGCAAGATCCCAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCACCCAGACGGCACTCTaGTGCTCTGTGTTCATATTC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEATQTAL*CSVFIF
Trigger: GAATATGAACACAGAGCACCAGAGTGCCGTCTGGGT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTGCCAACTGTTTAGCCTaGCTTGCGTTTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVANCLA*LAFSVC
Trigger: ACAAACTGAAAACGCAAGCCAGGCTAAACAGTTGGC...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTCATGTATGGATTGGTaGATCCAGAAGCAGAATAAG +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSCMDW*IQKQNK
Trigger: CTTATTCTGCTTCTGGATCCACCAATCCATACATGA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGTCTCATGTATGGATTaGTGGATCCAGAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAVSCMD*WIQKQN
Trigger: ATTCTGCTTCTGGATCCACCAATCCATACATGAGAC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGGCCGTCTCATGTATaGATTGGTGGATCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGPSHV*IGGSRS
Trigger: GCTTCTGGATCCACCAATCCATACATGAGACGGCCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTTGGATAAGGACTAACTaGATTGGGCCGTCTCATGTA +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVWIRTN*IGPSHV
Trigger: TACATGAGACGGCCCAATCCAGTTAGTCCTTATCCA...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGCTATTTCCAAACCTTaGCTGGTAAAGTGTATGGAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSAISKP*LVKCMD
Trigger: ATCCATACACTTTACCAGCCAAGGTTTGGAAATAGC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTCATCCATCTCATGAGTaGGATAAGGAGGCAATTTCC +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLHPSHE*DKEAIS
Trigger: GGAAATTGCCTCCTTATCCCACTCATGAGATGGATG...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTCTTTAAAGGGGTTGTaGCATGCAGCTCACGCTTTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFSLKGL*HAAHAL
Trigger: CAAAGCGTGAGCTGCATGCCACAACCCCTTTAAAGA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACGAGGGAGATCCTGGTaGGGTGATTCCTATTGGGAT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKRGRSW*GDSYWD
Trigger: ATCCCAATAGGAATCACCCCACCAGGATCTCCCTCG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGACTTTTTCAGCCATTTTaGCTTCCCAAAGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGLFQPF*LPKEPS
Trigger: GCTTGGCTCTTTGGGAAGCCAAAATGGCTGAAAAAG...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTGAGGCACATAGTCTaGGCCATACTTTTCACACTC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLRHIV*AILFTL
Trigger: GAGTGTGAAAAGTATGGCCCAGACTATGTGCCTCAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTACTGTGGAGTCTGTaGTCACGGACATGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLLWSL*SRTWSF
Trigger: AAAGGACCATGTCCGTGACCACAGACTCCACAGTAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGACCGAGTGAAGGCATATaGAGATGTAGTTACTGTGGA +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGPSEGI*RCSYCG
Trigger: TCCACAGTAACTACATCTCCATATGCCTTCACTCGG...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTATTATTCAAGGGCACTaGAGTACACTGATAGCATCT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSIIQGH*STLIAS
Trigger: AGATGCTATCAGTGTACTCCAGTGCCCTTGAATAAT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGTTAATAACCCTACAGTaGCCTCTAAGTGTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: HPSTQCGVSHCKRENMARLITLQ*PLSVQV
Trigger: CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAA...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGCCCCAGAATATTGCTTaGTTTATTGTCAAGGATACC +
Preference number: 4 (lower is better)
Translates to: HPSTQCGVSHCKRENMARPQNIA*FIVKDT
Trigger: GGTATCCTTGACAATAAACCAAGCAATATTCTGGGG...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATTGTGGCTGGCAGCCTaGCTGGCCGATTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKLWLAA*LADSCS
Trigger: TGAACAGGAATCGGCCAGCCAGGCTGCCAGCCACAA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATCGGAGACATTTGGTTaGCTGCTTTCACCTGGATTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSETFG*LLSPGF
Trigger: AAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATGCTCATTCAGAATCTaGAGCTCTGGATTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPCSFRI*SSGFSG
Trigger: GCCTGAAAATCCAGAGCTTCAGATTCTGAATGAGCA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTATGCGATGGGTGAGTaGTCTCACAGGACAACTCAT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLYAMGE*SHRTTH
Trigger: ATGAGTTGTCCTGTGAGATCACTCACCCATCGCATA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACGAGGTATGCGATGGGTaGGTGATCTCACAGGACAAC +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNEVCDG*VISQDN
Trigger: GTTGTCCTGTGAGATCACTCACCCATCGCATACCTC...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGGTCTGTGCGGAATTaGTCTGCCCTGAGGTATGCG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPRSVRN*SALRYA
Trigger: CGCATACCTCAGGGCAGATCAATTCCGCACAGACCT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATTGCTGCTGGAACCTaGACAGAATTCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPIAAGT*TEFFTR
Trigger: TCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTATTGCTGCTGGAACCTaGACAGAATTCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFIAAGT*TEFFTR
Trigger: TCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAAT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCACACTGAGCTTTGCTTaGAGTAAGCACCATTCATTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPATLSFA*SKHHSF
Trigger: AAATGAATGGTGCTTACTTCAAGCAAAGCTCAGTGT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGTGCTTTTTCCTTCTaGAGGAAGCTGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASAFSF*RKLRNL
Trigger: CAGGTTCCTCAGCTTCCTTCAGAAGGAAAAAGCACT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAACTTGGTACATTTGTaGCTTGTGCTCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFNLVHL*LVLQLC
Trigger: ACACAGCTGGAGCACAAGTCACAAATGTACCAAGTT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCACAGTGACTGCACATaGGCTTTTGGTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFHSDCT*AFGKWS
Trigger: AGACCATTTACCAAAAGCTCATGTGCAGTCACTGTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAAATGGCTCAGTCTCTaGAGCCTGTTGATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFKWLSL*SLLIQV
Trigger: CACTTGAATCAACAGGCTTCAGAGACTGAGCCATTT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATGTGCTGCCTGTTTATaGGGCTTATGTTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPCAACL*GLCCKR
Trigger: CCTTTTGCAACATAAGCCTCATAAACAGGCAGCACA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGTTTTGAGGGAGATGTaGACTCTGGGATGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAVLREM*TLGWLC
Trigger: ACACAACCATCCCAGAGTTCACATCTCCCTCAAAAC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTGTTGCTTTGGGGGTaGGGAAAAGTCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLLLWG*GKVWSI
Trigger: AATACTCCAGACTTTTCCTCACCCCCAAAGCAACAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGTTGCTTTGGGGGTaGGGAAAAGTCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLLLWG*GKVWSI
Trigger: AATACTCCAGACTTTTCCTCACCCCCAAAGCAACAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGATCCTTCTCTTTGCTaGTCATTGTTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEADPSLC*SLLLWG
Trigger: CCCCCAAAGCAACAATGATCAGCAAAGAGAAGGATC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGTCTGGCCAAAGAATaGTCCTTCTCTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSLAKE*SFSLLI
Trigger: GATCAGCAAAGAGAAGGATCATTCTTTGGCCAGACT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCCCATTTGGACATTATaGGTCTCGAACTCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFPIWTL*VSNSLD
Trigger: ATCAAGCGAGTTCGAGACTCATAATGTCCAAATGGG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAGTTGCGCAGCTTGTTaGCCAGACATATCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFSCAAC*PDISWF
Trigger: AAACCAAGATATGTCTGGTCAACAAGCTGCGCAACT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAAATCAAGTACCTTTGCTaGGCAAGTTGCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: WIRAKYIESLLERYHHLEIKYLC*ASCAAC
Trigger: ACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTGAT...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGAGCAGCATGCTTTTaGGTGTCCTTCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPRAACF*VSFWGG
Trigger: CCCTCCCCAGAAGGACACTCAAAAGCATGCTGCTCT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAAAATAACGACTTGGCGTaGAACTGCTTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: WIRAKYIESLLERYHHLENNDLA*NCFRCC
Trigger: GCAGCATCTGAAGCAGTTTCACGCCAAGTCGTTATT...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGTCCAAACATGCAGTaGCCCCTGAGAATGGACGGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSPNMQ*PLRMDG
Trigger: GCCGTCCATTCTCAGGGGTCACTGCATGTTTGGACT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTATAAAGGCAGAACGTaGAGCTGCTCATCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAYKGRT*SCSSSG
Trigger: ACCTGAGGATGAGCAGCTTCACGTTCTGCCTTTATA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAAAGAACTCAGTACCTaGATGGCACCACTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPKELST*MAPLRF
Trigger: AAAACGGAGTGGTGCCATTCAGGTACTGAGTTCTTT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGCTCTGCTAACATCCTaGCTTTTCGCCGAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAALLTS*LFAEKN
Trigger: GTTCTTTTCGGCGAAAAGTCAGGATGTTAGCAGAGC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTTGTCGGCAAGTCTTaGCTGGCTCTGCTAACATCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKFVGKS*LALLTS
Trigger: GGATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGGTTTCCATTGCATTaGTATGATGGATATTGGGTA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSRFPLH*YDGYWV
Trigger: TACCCAATATCCATCATATCAATGCAATGGAAACCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGGCAATTTCCCTACATaGTGTACATTTGGTCTAATG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAGNFPT*CTFGLM
Trigger: CATTAGACCAAATGTACATCATGTAGGGAAATTGCC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACATGAAGAGAGCTGTTaGACATGCCCGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPHEESC*TCPELH
Trigger: GTGCAGCTCCGGGCATGTTCAACAGCTCTCTTCATG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAATGGCTGCTTTTCCTaGCCATTAGCATCACTTAAT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPANGCFS*PLASLN
Trigger: ATTAAGTGATGCTAATGGTCAGGAAAAGCAGCCATT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGAGATCCTGGTGGGGTaGTTCCTATTGGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAEILVG*FLLGFF
Trigger: AAAGAATCCCAATAGGAATCACCCCACCAGGATCTC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGTGGTCTTTTCAAGTaGGGTAACCAACAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFCGLFK*GNQQKG
Trigger: CCCCTTTTGTTGGTTACCTCACTTGAAAAGACCACA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATGTGGTCTTTTCAAGTaGGGTAACCAACAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPCGLFK*GNQQKG
Trigger: CCCCTTTTGTTGGTTACCTCACTTGAAAAGACCACA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTGTTGCTGGTGAGCTaGGGTTTTTCCCACCACATT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALLLVS*GFSHHI
Trigger: AATGTGGTGGGAAAAACCTCAGCTCACCAGCAACAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCCACTTGGGAGCCAGTaGAAATTAAGTGCTATGGTA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFPLGSQ*KLSAMV
Trigger: TACCATAGCACTTAATTTTCACTGGCTCCCAAGTGG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGGCATAGGGAGAGCATaGGCTGAAATATCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAGIGRA*AEISLN
Trigger: ATTCAGGGATATTTCAGCTCATGCTCTCCCTATGCC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAGCTTACAAAGATTTaGCCAATAAAACCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQLTKI*PIKPKG
Trigger: GCCTTTGGGTTTTATTGGTCAAATCTTTGTAAGCTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATAGAGGTCACTGCAGATaGGGGAGATGTAGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KETLGALRVSALSFPPTHRGHCR*GRCSKR
Trigger: TCTCTTGCTACATCTCCCTCATCTGCAGTGACCTCT...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTAAAGCCAAGACAGGCTaGAAGCTAGGCCTTGCATGC +
Preference number: 4 (lower is better)
Translates to: DKAAAQFERTESNFQRNSKAKTG*KLGLAC
Trigger: GCATGCAAGGCCTAGCTTTCAGCCTGTCTTGGCTTT...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAACAGCAATCCAGCAGTTaGAGTCGGGTCTCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKQQSSS*SRVSFL
Trigger: TAGAAAGGAGACCCGACTGCAACTGCTGGATTGCTG...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413648.2
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCTCGTCCCTCAGCCTTaGAGCAATCCAGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMLVPQP*SNPAVA
Trigger: TGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413648.2
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATGGACTTAGTCTGTTaGCCTCAACATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPMDLVC*PQHGWF
Trigger: GAACCAACCATGTTGAGGGCAACAGACTAAGTCCAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGATTTTCAGGCCCACTaGAGTTATGTGTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPADFQAH*SYVLKN
Trigger: GTTTTTCAACACATAACTGCAGTGGGCCTGAAAATC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTCTGGATGTTATTTTCTaGAGGAGATGGGCATATCTC +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVLDVIF*RRWAYL
Trigger: GAGATATGCCCATCTCCTGCAGAAAATAACATCCAG...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACCTGCCACCAGGAGCTTaGAAATTGCTGCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNLPPGA*KLLLEP
Trigger: AGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAG...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGAATACCGTTCAGAGCTaGCACCAGGAGCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLNTVQS*HQELAN
Trigger: ATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAATACCGTTCAGAGCTaGCACCAGGAGCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEANTVQS*HQELAN
Trigger: ATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTCTCCACCATTCAGAGTaGTTTTTCCTTCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLLHHSE*FFLLKE
Trigger: TTCCTTCAGAAGGAAAAAGCACTCTGAATGGTGGAG...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAACTCTGGGAAGGTGGTaGCTCAGGTTTACCCTCTAT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKTLGRW*LRFTLY
Trigger: ATAGAGGGTAAACCTGAGGCACCACCTTCCCAGAGT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGAAAATTGGTGGGTTATaGTTGAGGTGTTCTGACATT +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLKIGGL*LRCSDI
Trigger: AATGTCAGAACACCTCAAGCATAACCCACCAATTTT...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTGTTTCTCATCAACTaGTGGCAGTTGTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLFLIN*WQLSCS
Trigger: GCTACAGGACAACTGCCAGCAGTTGATGAGAAACAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAAACAAGATCTCGTGTTTaGTCCTTGTCTCGACCCTTC +
Preference number: 4 (lower is better)
Translates to: WIRAKYIESLLERYHHLETRSRV*SLSRPF
Trigger: GAAGGGTCGAGACAAGGAGCAAACACGAGATCTTGT...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCACAAGATCTCGTGTTTaGTCCTTGTCTCGACCCTTC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEATRSRV*SLSRPF
Trigger: GAAGGGTCGAGACAAGGAGCAAACACGAGATCTTGT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTACATTTGTGACTTGTaGTCCAGCTGTGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAYICDL*SSCVVF
Trigger: GAAAACAACACAGCTGGAGCACAAGTCACAAATGTA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGATGGTTGTGTTTGTGCTaGCTGTTTATGAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGWLCLC*LFMRLM
Trigger: CATAAGCCTCATAAACAGGCAGCACAAACACAACCA...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTCACATTATCACAGCTTaGAGGTGGATTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVHIITA*RWILLL
Trigger: AAGCAAGAGAATCCACCTGCAAGCTGTGATAATGTG...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCATGATGCTCTTTTGCTaGACATTATCACAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAMMLFC*TLSQLA
Trigger: TGCAAGCTGTGATAATGTGCAGCAAAAGAGCATCAT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTCAATGATGCTCTTTTaGTGCACATTATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSMMLF*CTLSQL
Trigger: AAGCTGTGATAATGTGCAGCAAAAGAGCATCATTGA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAACTGCTTCAGATGCTaGTCCATGGTCTCAATGATG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPNCFRC*SMVSMM
Trigger: CATCATTGAGACCATGGAGCAGCATCTGAAGCAGTT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATCTGAAGAAGTTGTTTaGTGCTCTAAAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSEEVV*CSKAGV
Trigger: CACCCCAGCTTTAGAGCAGCAAACAACTTCTTCAGA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGAACATGCCCGGAGCTaGACTGTAGTTATGGATTAT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPEHARS*TVVMDY
Trigger: ATAATCCATAACTACAGTGCAGCTCCGGGCATGTTC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTCATCGTTGTCCTCTaGACCAGAAGCCACACCCTG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLIVVL*TRSHTL
Trigger: CAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGTTTTGGCTCATTCATaGTCTTATGCTGGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSVLAHS*SYAGKR
Trigger: TCTTTTACCAGCATAAGAGCATGAATGAGCCAAAAC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCCCCACCTTCTTTTTaGATAGAATGCTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASPPSF*IECFGL
Trigger: AAGACCAAAGCATTCTATGCAAAAAGAAGGTGGGGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCACTTGCCAAACTCCTaGCTTACAATTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAHLPNS*LTIFPF
Trigger: AAAGGGAAAAATTGTAAGGCAGGAGTTTGGCAAGTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCTGTTGCCCTCAACATaGTTGGTTCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLLLPST*LVLSCS
Trigger: GGAACAGGATAGAACCAACCATGTTGAGGGCAACAG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTGTTGCCCTCAACATaGTTGGTTCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALLPST*LVLSCS
Trigger: GGAACAGGATAGAACCAACCATGTTGAGGGCAACAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAACTCACACGACTATTCTaGCTTCCCTTCATACAGGGT +
Preference number: 4 (lower is better)
Translates to: WIRAKYIESLLERYHHLELTRLF*LPFIQG
Trigger: ACCCTGTATGAAGGGAAGCCAGAATAGTCGTGTGAG...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTCACACGACTATTCTaGCTTCCCTTCATACAGGGT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALTRLF*LPFIQG
Trigger: ACCCTGTATGAAGGGAAGCCAGAATAGTCGTGTGAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCCTGGATTTCTTTCTTaGCTTACCCCGAAGTTACGT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFPGFLS*LTPKLR
Trigger: ACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACCTGGATTTCTTTCTTaGCTTACCCCGAAGTTACGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPPGFLS*LTPKLR
Trigger: ACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACAAATCGGAGACATTTaGTTGACTGCTTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPQIGDI*LTAFTW
Trigger: CCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGTTAACTGCATTTTCTTaGGCTACAGAACTCACAGAT +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLLTAFS*ATELTD
Trigger: ATCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAA...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACCAGAATCTGAAGCTCTaGATTTTCAGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYQNLKL*IFRPTA
Trigger: TGCAGTGGGCCTGAAAATCCAGAGCTTCAGATTCTG...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCAGAATCTGAAGCTCTaGATTTTCAGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAQNLKL*IFRPTA
Trigger: TGCAGTGGGCCTGAAAATCCAGAGCTTCAGATTCTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTTTCTGCACCGCAATaGAAACACAATCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSFSAPQ*KHNLDN
Trigger: ATTATCCAGATTGTGTTTCCATTGCGGTGCAGAAAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAACTCACCACTGCAGCTaGCTTTGGAGGCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPTHHCS*LWRQLR
Trigger: TCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGACTCACCACTGCAGCTaGCTTTGGAGGCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMTHHCS*LWRQLR
Trigger: TCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGT...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGATTGTGTTACTTTGGTTaGGGTAGTGGTGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGLCYFG*GSGGVL
Trigger: AAGAACACCACCACTACCCCAACCAAAGTAACACAA...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTGATGGATTAGGACTCTaGGAAGGTGGTGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DKAAAQFERTESNFQRNSDGLGL*EGGASG
Trigger: ACCTGAGGCACCACCTTCCCAGAGTCCTAATCCATC...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTGCTACCAAAAATTGGTaGGTTATGCTTGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVATKNW*VMLEVF
Trigger: GAACACCTCAAGCATAACCCACCAATTTTTGGTAGC...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTACTGCTACCAAAAATTaGTGGGTTATGCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLTATKN*WVMLEV
Trigger: CACCTCAAGCATAACCCACCAATTTTTGGTAGCAGT...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTCTCATCAACTGCTaGCAGTTGTCCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFLINC*QLSCSS
Trigger: AGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTCAGATAGTGCTGTGTTaGGGGCACAAGATCTCGTGT +
Preference number: 4 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSQIVLC*GHKISC
Trigger: ACACGAGATCTTGTGCCCCCAACACAGCACTATCTG...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACAGATAGTGCTGTGTTaGGGGCACAAGATCTCGTGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKQIVLC*GHKISC
Trigger: ACACGAGATCTTGTGCCCCCAACACAGCACTATCTG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAATTCAATCCATCCTaGTTTCAGATAGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQFNPS*FQIVLC
Trigger: ACACAGCACTATCTGAAACCAGGATGGATTGAATTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGTTCCAGTGTATTGTTTaGAGGTCATTTGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLFQCIV*RSFDWR
Trigger: TCTCCAATCAAATGACCTCCAAACAATACACTGGAA...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAATGGAACTGGAGATGTTaGTCCACTGTACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKWNWRC*STVPWD
Trigger: GTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCA...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTGGTGTGAGGGTTTTTaGAACTGGAGATGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLWCEGF*NWRCWS
Trigger: GGACCAACATCTCCAGTTCCAAAAACCCTCACACCA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACTTGGAGAAGTGCACCTaGTGTGAGGGTTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYLEKCT*CEGFWN
Trigger: GTTCCAAAAACCCTCACACCAGGTGCACTTCTCCAA...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGTAAATGGTCTGTTTTaGAGAAGTGCACCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFVNGLF*RSAPGV
Trigger: CACACCAGGTGCACTTCTCCAAAACAGACCATTTAC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGTGCTGTTTCAACACTaGGGACATAAGTTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAVLFQH*GHKFFS
Trigger: ACTGAAAAACTTATGTCCCCAGTGTTGAAACAGCAC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCTTCCACTTTAGTCTaGCCAAAGAATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASSTLV*PKNDPS
Trigger: AGAAGGATCATTCTTTGGCCAGACTAAAGTGGAAGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGGCAAGACTCAGTTTaGGGTTGCTGTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKWQDSV*GCCVCC
Trigger: GCAGCAAACACAGCAACCCCAAACTGAGTCTTGCCA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACGTGCATACAGGCATGTaGCTTGCATCCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNVHTGM*LASRFH
Trigger: GTGGAACCTGGATGCAAGCCACATGCCTGTATGCAC...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTCCATGTTTTGTTTTCTaGTGGTGCTGTGTGCATACA +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVPCFVF*WCCVHT
Trigger: TGTATGCACACAGCACCACCAGAAAACAAAACATGG...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAATCACAGCTTGCAGGTaGATTCTCTTGCTTAGTTAC +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGITACR*ILLLSY
Trigger: GTAACTAAGCAAGAGAATCCACCTGCAAGCTGTGAT...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTGGTCAAATAACGACTTaGCGTGAAACTGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVGQITT*RETASD
Trigger: ATCTGAAGCAGTTTCACGCCAAGTCGTTATTTGACC...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTCTAAAGCTGGGGTGTaGCTATCAAGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASKAGV*LSSSAA
Trigger: TGCTGCAGAACTTGATAGCCACACCCCAGCTTTAGA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTCTCTTCCTCTTTTaGGTCATCCCCAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFLFLF*VIPKQL
Trigger: AAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGCCAACTGTTTAGCCTaGCTTGCGTTTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFANCLA*LAFSVC
Trigger: ACAAACTGAAAACGCAAGCCAGGCTAAACAGTTGGC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGCCAACTGTTTAGCCTaGCTTGCGTTTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPANCLA*LAFSVC
Trigger: ACAAACTGAAAACGCAAGCCAGGCTAAACAGTTGGC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATGGATAAGGACTAACTaGATTGGGCCGTCTCATGTA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPWIRTN*IGPSHV
Trigger: TACATGAGACGGCCCAATCCAGTTAGTCCTTATCCA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCAGAGGGTCTTGGCTTaGATACCTATACAGATCCAT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFQRVLA*IPIQIH
Trigger: ATGGATCTGTATAGGTATCCAAGCCAAGACCCTCTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTTATAGTCCATGTTTaGATTGCTCAGATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAFIVHV*IAQIGW
Trigger: CCACCCAATCTGAGCAATCCAAACATGGACTATAAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTTTTTCAGCCATTTTaGCTTCCCAAAGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLFQPF*LPKEPS
Trigger: GCTTGGCTCTTTGGGAAGCCAAAATGGCTGAAAAAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTTTTTCAGCCATTTTaGCTTCCCAAAGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLFQPF*LPKEPS
Trigger: GCTTGGCTCTTTGGGAAGCCAAAATGGCTGAAAAAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTGAGGCACATAGTCTaGGCCATACTTTTCACACTC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALRHIV*AILFTL
Trigger: GAGTGTGAAAAGTATGGCCCAGACTATGTGCCTCAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACCGAGTGAAGGCATATaGAGATGTAGTTACTGTGGA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPPSEGI*RCSYCG
Trigger: TCCACAGTAACTACATCTCCATATGCCTTCACTCGG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCATTATTCAAGGGCACTaGAGTACACTGATAGCATCT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAIIQGH*STLIAS
Trigger: AGATGCTATCAGTGTACTCCAGTGCCCTTGAATAAT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTACAAGGACTTCACTaGATGAGCAAAATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLQGLH*MSKIQR
Trigger: CCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTACAAGTAAGTCTCTaGCCAACAGCCACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLQVSL*PTATCQ
Trigger: TTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTACAAGTAAGTCTCTaGCCAACAGCCACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLQVSL*PTATCQ
Trigger: TTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGAGTGGGACCTCTCGTTaGAGCCTGTGCCAGTACCTT +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMSGTSR*SLCQYL
Trigger: AAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACT...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CAA 72 bp CACTGCCCACGTCATGAGAACTATACTACTGACAGGTaGGTTGTGGTCTTTTCAAGTGAGGTAACCAACAAA +
Preference number: 4 (lower is better)
Translates to: HCPRHENYTTDR*VVVFSSEVTNK
Trigger: TTTGTTGGTTACCTCACTTGAAAAGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTTGTTTCAATTTCTTaGTCTGAAGGAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLVSIS*SEGAQR
Trigger: TCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTCGGAGACATTTGGTTaGCTGCTTTCACCTGGATTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASETFG*LLSPGF
Trigger: AAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTGCTCATTCAGAATCTaGAGCTCTGGATTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLCSFRI*SSGFSG
Trigger: GCCTGAAAATCCAGAGCTTCAGATTCTGAATGAGCA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTTTAATGGCATTTATGTaGGATGTGGTTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLLMAFM*DVVFCT
Trigger: GGTGCAGAAAACCACATCTCACATAAATGCCATTAA...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAACTCATTAGTAGCCTaGCTGTTAATGGCATTTATG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPANSLVA*LLMAFM
Trigger: CATAAATGCCATTAACAGTCAGGCTACTAATGAGTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATTATGCGATGGGTGAGTaGTCTCACAGGACAACTCAT +
Preference number: 4 (lower is better)
Translates to: KETLGALRVSALSFPPTHYAMGE*SHRTTH
Trigger: ATGAGTTGTCCTGTGAGATCACTCACCCATCGCATA...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGTATGCGATGGGTaGGTGATCTCACAGGACAAC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPEVCDG*VISQDN
Trigger: GTTGTCCTGTGAGATCACTCACCCATCGCATACCTC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTACACTGAGCTTTGCTTaGAGTAAGCACCATTCATTT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLTLSFA*SKHHSF
Trigger: AAATGAATGGTGCTTACTTCAAGCAAAGCTCAGTGT...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAACCTTCTGAAGGAAGCTaGGGAACCTGTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKPSEGS*GTCGRG
Trigger: TCCTCTTCCACAGGTTCCTCAGCTTCCTTCAGAAGG...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACCTTCTGAAGGAAGCTaGGGAACCTGTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPPSEGS*GTCGRG
Trigger: TCCTCTTCCACAGGTTCCTCAGCTTCCTTCAGAAGG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAGTGCTTTTTCCTTCTaGAGGAAGCTGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKSAFSF*RKLRNL
Trigger: CAGGTTCCTCAGCTTCCTTCAGAAGGAAAAAGCACT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTATGCTTGAGGTGTTCTaGCATTGGTCTTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFMLEVF*HWSCFL
Trigger: GAGAAAACAAGACCAATGTCAGAACACCTCAAGCAT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAATTGGTGGGTTATGCTTaGGGTGTTCTGACATTGGTC +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKLVGYA*GVLTLV
Trigger: GACCAATGTCAGAACACCTCAAGCATAACCCACCAA...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTGGGATTCCGCTTGGTaGAAACGAGGGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMWDSAW*KRGAFN
Trigger: ATTGAAGGCCCCTCGTTTTCACCAAGCGGAATCCCA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGGGATTCCGCTTGGTaGAAACGAGGGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPWDSAW*KRGAFN
Trigger: ATTGAAGGCCCCTCGTTTTCACCAAGCGGAATCCCA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAACTTGGTACATTTGTaGCTTGTGCTCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEANLVHL*LVLQLC
Trigger: ACACAGCTGGAGCACAAGTCACAAATGTACCAAGTT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAACCTTGGGACTGCCCTTaGTTCATTTCAACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKPWDCP*FISTWY
Trigger: GTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGG...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGTCTCTGAAGCCTGTTaGTTCAAGTGCTGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAVSEAC*FKCCFN
Trigger: GTTGAAACAGCACTTGAATCAACAGGCTTCAGAGAC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGTGCTGCCTGTTTATaGGGCTTATGTTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEACAACL*GLCCKR
Trigger: CCTTTTGCAACATAAGCCTCATAAACAGGCAGCACA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGTTTTGAGGGAGATGTaGACTCTGGGATGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKVLREM*TLGWLC
Trigger: ACACAACCATCCCAGAGTTCACATCTCCCTCAAAAC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATGATCCTTCTCTTTGCTaGTCATTGTTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KETLGALRVSALSFPPTHDPSLC*SLLLWG
Trigger: CCCCCAAAGCAACAATGATCAGCAAAGAGAAGGATC...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCGATCCTTCTCTTTGCTaGTCATTGTTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSDPSLC*SLLLWG
Trigger: CCCCCAAAGCAACAATGATCAGCAAAGAGAAGGATC...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGATCCTTCTCTTTGCTaGTCATTGTTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKDPSLC*SLLLWG
Trigger: CCCCCAAAGCAACAATGATCAGCAAAGAGAAGGATC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAGGAAAATATTGCATGTaGTGCAAGTTTTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGGKYCM*CKFWVL
Trigger: CAAGACCCAAAACTTGCATCACATGCAATATTTTCC...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAATCAAGTACCTTTGCTaGGCAAGTTGCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKIKYLC*ASCAAC
Trigger: ACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTGAT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAATTGGCCTGTGCATCTaGCTATGGCAAGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKIGLCI*LWQDSV
Trigger: AACTGAGTCTTGCCATAGTCAGATGCACAGGCCAAT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCTCCATGGTCTCAATaGTGCTCTTTTGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKAPWSQ*CSFAAH
Trigger: ATGTGCAGCAAAAGAGCATCATTGAGACCATGGAGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAATAACGACTTGGCGTaGAACTGCTTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKNNDLA*NCFRCC
Trigger: GCAGCATCTGAAGCAGTTTCACGCCAAGTCGTTATT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGATGGGAAATCATATTaGGTCTTGACAGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPDGKSY*VLTGVS
Trigger: GGATACACCTGTCAAGACTCAATATGATTTCCCATC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTCCATTGCATTGATATaGTGGATATTGGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPASIALI*WILGIL
Trigger: CAGAATACCCAATATCCATCATATCAATGCAATGGA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGGTTTCCATTGCATTaGTATGATGGATATTGGGTA +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPARFPLH*YDGYWV
Trigger: TACCCAATATCCATCATATCAATGCAATGGAAACCT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTGGCAATTTCCCTACATaGTGTACATTTGGTCTAATG +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVGNFPT*CTFGLM
Trigger: CATTAGACCAAATGTACATCATGTAGGGAAATTGCC...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACAGGTAAGTGGGCTCTaGAGTTTCATGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPQVSGL*SFMWLS
Trigger: GCTGAGCCACATGAAACTTCAGAGCCCACTTACCTG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCCACTTGGGAGCCAGTaGAAATTAAGTGCTATGGTA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAPLGSQ*KLSAMV
Trigger: TACCATAGCACTTAATTTTCACTGGCTCCCAAGTGG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTCAGCTTACAAAGATTTaGCCAATAAAACCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVQLTKI*PIKPKG
Trigger: GCCTTTGGGTTTTATTGGTCAAATCTTTGTAAGCTG...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCTTCAAAGGACAGGCTaGCTCTCTTGTTACAGGCTA +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSLQRTG*LSCYRL
Trigger: TAGCCTGTAACAAGAGAGTCAGCCTGTCCTTTGAAG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACATTGTGACTCTCTGGTaGATAGCACAGTGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYIVTLW*IAQCVV
Trigger: CACTACACACTGTGCTATTCACCAGAGAGTCACAAT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACCTATATCTTCCCTTATaGCCAAAGCACCACCTACTG +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYLYLPL*PKHHLL
Trigger: CAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAG...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCATGGACTTAGTCTGTTaGCCTCAACATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAMDLVC*PQHGWF
Trigger: GAACCAACCATGTTGAGGGCAACAGACTAAGTCCAT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGACATTTGGTTGACTaGTTTCACCTGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPARHLVD*FHLDFF
Trigger: AAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGAGCTTGCAAATTGCTaGTGGAACCTGAACAGAATT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFELANC*WNLNRI
Trigger: AATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGAGCTTGCAAATTGCTaGTGGAACCTGAACAGAATT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPELANC*WNLNRI
Trigger: AATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAATACCGTTCAGAGCTaGCACCAGGAGCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKNTVQS*HQELAN
Trigger: ATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTCCACCATTCAGAGTaGTTTTTCCTTCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLHHSE*FFLLKE
Trigger: TTCCTTCAGAAGGAAAAAGCACTCTGAATGGTGGAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAAAATTGGTGGGTTATaGTTGAGGTGTTCTGACATT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAKIGGL*LRCSDI
Trigger: AATGTCAGAACACCTCAAGCATAACCCACCAATTTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACCTGTAGCTCTCCACTaGTACCAAAAATTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKPVALH*YQKLVG
Trigger: ACCCACCAATTTTTGGTAGCAGTGGAGAGCTACAGG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGGTTGTGTTTGTGCTaGCTGTTTATGAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFWLCLC*LFMRLM
Trigger: CATAAGCCTCATAAACAGGCAGCACAAACACAACCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATGGTTGTGTTTGTGCTaGCTGTTTATGAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPWLCLC*LFMRLM
Trigger: CATAAGCCTCATAAACAGGCAGCACAAACACAACCA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGTTTGCTGCTGTTCTTaGTTCTGTAAGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAVCCCS*FCKRCH
Trigger: GTGGCATCTCTTACAGAAGCAAGAACAGCAGCAAAC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATCTGGTGGTGCTGTGTaGATACAGGCATGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKSGGAV*IQACGL
Trigger: CAAGCCACATGCCTGTATGCACACAGCACCACCAGA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATCTGGTGGTGCTGTGTaGATACAGGCATGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSGGAV*IQACGL
Trigger: CAAGCCACATGCCTGTATGCACACAGCACCACCAGA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTATGATGCTCTTTTGCTaGACATTATCACAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVMMLFC*TLSQLA
Trigger: TGCAAGCTGTGATAATGTGCAGCAAAAGAGCATCAT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCGAAGAAGTTGTTTGCTaGTCTAAAGCTGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSEEVVC*SKAGVW
Trigger: CCACACCCCAGCTTTAGAGCAGCAAACAACTTCTTC...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTCTGAAGAAGTTGTTTaGTGCTCTAAAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLSEEVV*CSKAGV
Trigger: CACCCCAGCTTTAGAGCAGCAAACAACTTCTTCAGA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTCTGAAGAAGTTGTTTaGTGCTCTAAAGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASEEVV*CSKAGV
Trigger: CACCCCAGCTTTAGAGCAGCAAACAACTTCTTCAGA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGAGTGCATACCAATGTaGTGCCATTCTGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAECIPM*CHSACC
Trigger: ACAACATGCAGAATGGCAGCACATTGGTATGCACTC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGAACATGCCCGGAGCTaGACTGTAGTTATGGATTAT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAEHARS*TVVMDY
Trigger: ATAATCCATAACTACAGTGCAGCTCCGGGCATGTTC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAAAGGGGTTGTGGCATaGAGCTCACGCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPKGVVA*SSRFAH
Trigger: GTGTGCAAAGCGTGAGCTGCATGCCACAACCCCTTT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATGCAGGCATCAGTCTaGTCAATCCTCTTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPMQASV*SILLLK
Trigger: CTTTAACAAGAGGATTGAGCAGACTGATGCCTGCAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTATGCAGGCATCAGTCTaGTCAATCCTCTTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFMQASV*SILLLK
Trigger: CTTTAACAAGAGGATTGAGCAGACTGATGCCTGCAT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGTTCAATATCCTATTaGCAAACTAGTGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSSISY*QTSVEV
Trigger: TACCTCAACACTAGTTTGGCAATAGGATATTGAACT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAATGATGGTACACAATaGTTTCACTCTCAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSNDGTQ*FHSQFN
Trigger: ATTGAACTGAGAGTGAAAGCATTGTGTACCATCATT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGACACTTGCCAAACTCCTaGCTTACAATTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGHLPNS*LTIFPF
Trigger: AAAGGGAAAAATTGTAAGGCAGGAGTTTGGCAAGTG...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAACTGTACATCACTGTaGGTCAATCAAGATGAAAAA +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSNCTSL*VNQDEK
Trigger: TTTTTCATCTTGATTGACGCACAGTGATGTACAGTT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGGCCTTTACAAATTGCTaGCAGACTCAAGATTTAAAA +
Preference number: 4 (lower is better)
Translates to: HPSTQCGVSHCKRENMARAFTNC*QTQDLK
Trigger: TTTTAAATCTTGAGTCTGGCAGCAATTTGTAAAGGC...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCTGAAAGCTAGGCCTTaGATGCCAGTTAGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSLKARP*MPVSQV
Trigger: AACTTGGCTAACTGGCATGCAAGGCCTAGCTTTCAG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACTGTGGGGTATCTCATTaGAAGAGGGAAAACATGGCA +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYCGVSH*KRENMA
Trigger: TGCCATGTTTTCCCTCTTGCAATGAGATACCCCACA...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGATTTCTCTAATAGCTaGCACATTAGGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEADFSNS*HIRTCS
Trigger: GGAGCAGGTCCTAATGTGGCAGCTATTAGAGAAATC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTCTGCCCTGTGCCTTTaGGTTAATTACCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLSALCL*VNYLSS
Trigger: GGAAGAAAGGTAATTAACGCAAAGGCACAGGGCAGA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGCCCTCAACATGGTTaGTTCTATCCTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEACPQHG*FYPVPS
Trigger: TGATGGAACAGGATAGAACCAACCATGTTGAGGGCA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACTGTTGCCCTCAACATaGTTGGTTCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLLPST*LVLSCS
Trigger: GGAACAGGATAGAACCAACCATGTTGAGGGCAACAG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTGTTCTGTCTGGCAAATaGGAGGTGATGGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSVLSGK*EVMVSG
Trigger: TCCTGATACCATCACCTCCCATTTGCCAGACAGAAC...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCGTTCTGTCTGGCAAATaGGAGGTGATGGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSVLSGK*EVMVSG
Trigger: TCCTGATACCATCACCTCCCATTTGCCAGACAGAAC...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGTTCTGTCTGGCAAATaGGAGGTGATGGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKVLSGK*EVMVSG
Trigger: TCCTGATACCATCACCTCCCATTTGCCAGACAGAAC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGCCAGAGGTTCTGTCTaGCAAATGGGAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPARGSV*QMGGDG
Trigger: ACCATCACCTCCCATTTGCCAGACAGAACCTCTGGC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTAGTGGGCTTCCATTCTaGAGCTTTGTAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: DKAAAQFERTESNFQRNSSGLPF*SFVARG
Trigger: ACCTCTGGCTACAAAGCTCCAGAATGGAAGCCCACT...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGTCTCCATTTACTTCTaGATGAGCTCTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKVSIYF*MSSLRQ
Trigger: CTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGAC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCAAATCGGAGACATTTaGTTGACTGCTTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAQIGDI*LTAFTW
Trigger: CCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACAGAATCTGAAGCTCTaGATTTTCAGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKQNLKL*IFRPTA
Trigger: TGCAGTGGGCCTGAAAATCCAGAGCTTCAGATTCTG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGCACTGCAGCTGGCTTTaGAGGCAGCTCAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVHCSWL*RQLRVR
Trigger: TCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTG...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACACTGCAGCTGGCTTTaGAGGCAGCTCAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPHCSWL*RQLRVR
Trigger: TCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACAGACGCTAGCTTTGTaGTTCCCTGGATGTTATTTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPQTLAL*FPGCYF
Trigger: AAAATAACATCCAGGGAACCACAAAGCTAGCGTCTG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCAGACGCTAGCTTTGTaGTTCCCTGGATGTTATTTT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFQTLAL*FPGCYF
Trigger: AAAATAACATCCAGGGAACCACAAAGCTAGCGTCTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGCATACATGTGTAGATaGATTAGGACTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAAYMCR*IRTLGR
Trigger: CCTTCCCAGAGTCCTAATCCATCTACACATGTATGC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTCTCAGAACACAATaGAACAGTCATTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFLRTQ*NSHCPC
Trigger: GCAGGGACAATGACTGTTCCATTGTGTTCTGAGAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTACTGCTACCAAAAATTaGTGGGTTATGCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFTATKN*WVMLEV
Trigger: CACCTCAAGCATAACCCACCAATTTTTGGTAGCAGT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACCAGATAGTGCTGTGTTaGGGGCACAAGATCTCGTGT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNQIVLC*GHKISC
Trigger: ACACGAGATCTTGTGCCCCCAACACAGCACTATCTG...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTTGGAGGTCATTTGATTaGAGAGATTGGGTTGATACT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLWRSFD*RDWVDT
Trigger: AGTATCAACCCAATCTCTCCAATCAAATGACCTCCA...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTCCAGTGTATTGTTTaGAGGTCATTTGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAFQCIV*RSFDWR
Trigger: TCTCCAATCAAATGACCTCCAAACAATACACTGGAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTTGGAACTGGAGATGTTaGTCCACTGTACCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: DKAAAQFERTESNFQRNSWNWRC*STVPWD
Trigger: GTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCA...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGGTGTGAGGGTTTTTaGAACTGGAGATGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKWCEGF*NWRCWS
Trigger: GGACCAACATCTCCAGTTCCAAAAACCCTCACACCA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGGAGATGTGAACTCTaGGATGGTTGTGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGRCEL*DGCVCA
Trigger: AGCACAAACACAACCATCCCAGAGTTCACATCTCCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCCATGTTTTGTTTTCTaGTGGTGCTGTGTGCATACA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFPCFVF*WCCVHT
Trigger: TGTATGCACACAGCACCACCAGAAAACAAAACATGG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATCACAGCTTGCAGGTaGATTCTCTTGCTTAGTTAC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPITACR*ILLLSY
Trigger: GTAACTAAGCAAGAGAATCCACCTGCAAGCTGTGAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGAGTAAGAGCCTTATaGTCAAATAACGACTTGGCG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRVRAL*SNNDLA
Trigger: CGCCAAGTCGTTATTTGACCATAAGGCTCTTACTCT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTACACATCTGCAAGATaGGAAATCATATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSYTSAR*EIILSL
Trigger: AAGACTCAATATGATTTCCCATCTTGCAGATGTGTA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGTACACATCTGCAAGATaGGAAATCATATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLYTSAR*EIILSL
Trigger: AAGACTCAATATGATTTCCCATCTTGCAGATGTGTA...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAAGTTTCTTATATGTTaGTGCCATAAGAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAKFLIC*CHKSGQ
Trigger: CTGTCCACTCTTATGGCACCAACATATAAGAAACTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGTCTCATGTATGGATTaGTGGATCCAGAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPVSCMD*WIQKQN
Trigger: ATTCTGCTTCTGGATCCACCAATCCATACATGAGAC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGTCTCATGTATGGATTaGTGGATCCAGAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFVSCMD*WIQKQN
Trigger: ATTCTGCTTCTGGATCCACCAATCCATACATGAGAC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGGGCCGTCTCATGTATaGATTGGTGGATCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPGPSHV*IGGSRS
Trigger: GCTTCTGGATCCACCAATCCATACATGAGACGGCCC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTACATGATGTACATTTaGTCTAATGGTACAACTGCT +
Preference number: 4 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSYMMYI*SNGTTA
Trigger: AGCAGTTGTACCATTAGACCAAATGTACATCATGTA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGATTTATAGTCCATGTTTaGATTGCTCAGATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGFIVHV*IAQIGW
Trigger: CCACCCAATCTGAGCAATCCAAACATGGACTATAAA...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAACCCATTAGCTGTGTaGGAAAGCATGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEANPLAV*ESMSFS
Trigger: GGAGAATGACATGCTTTCCCACACAGCTAATGGGTT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTGTGTAAGCCTCCTTaGACACAAGCAGTTCTATCA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLCKPP*TQAVLS
Trigger: TGATAGAACTGCTTGTGTCCAAGGAGGCTTACACAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGACGAGGGAGATCCTaGTGGGGTGATTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPRRGRS*WGDSYW
Trigger: CCAATAGGAATCACCCCACCAGGATCTCCCTCGTCT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTTTTTCAGCCATTTTaGCTTCCCAAAGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALFQPF*LPKEPS
Trigger: GCTTGGCTCTTTGGGAAGCCAAAATGGCTGAAAAAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTGTGGTCACGGACATaGTCCTTTCGGCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLWSRT*SFRQET
Trigger: AGTCTCTTGCCGAAAGGACCATGTCCGTGACCACAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCCGAGTGAAGGCATATaGAGATGTAGTTACTGTGGA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAPSEGI*RCSYCG
Trigger: TCCACAGTAACTACATCTCCATATGCCTTCACTCGG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTGCATAGAATGCTTTaGTCTTTTCCTAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPALHRML*SFPRCH
Trigger: ATGGCATCTAGGAAAAGACCAAAGCATTCTATGCAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTACAAGGACTTCACTaGATGAGCAAAATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALQGLH*MSKIQR
Trigger: CCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTACAAGTAAGTCTCTaGCCAACAGCCACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALQVSL*PTATCQ
Trigger: TTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGACCCAAGAGCTCCGATaGAGATGCACAAGATTAATG +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLTQELR*RCTRLM
Trigger: CATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCAGCGCTTTAGTGGTCTaGATAGAAGATCACGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSSALVV*IEDHVS
Trigger: GCTGACGTGATCTTCTATCCAGACCACTAAAGCGCT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATATTCCTGTTCATGCCTaGGTTTTCTGGCATCCATCG +
Preference number: 4 (lower is better)
Translates to: KETLGALRVSALSFPPTHIPVHA*VFWHPS
Trigger: CGATGGATGCCAGAAAACCCAGGCATGAACAGGAAT...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTTGTTTCAATTTCTTaGTCTGAAGGAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALVSIS*SEGAQR
Trigger: TCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATCGGAGACATTTGGTTaGCTGCTTTCACCTGGATTT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKSETFG*LLSPGF
Trigger: AAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTTGCTCATTCAGAATCTaGAGCTCTGGATTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSCSFRI*SSGFSG
Trigger: GCCTGAAAATCCAGAGCTTCAGATTCTGAATGAGCA...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGCTCATTCAGAATCTaGAGCTCTGGATTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKCSFRI*SSGFSG
Trigger: GCCTGAAAATCCAGAGCTTCAGATTCTGAATGAGCA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTAATGGCATTTATGTaGGATGTGGTTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLMAFM*DVVFCT
Trigger: GGTGCAGAAAACCACATCTCACATAAATGCCATTAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTAACTCATTAGTAGCCTaGCTGTTAATGGCATTTATG +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLNSLVA*LLMAFM
Trigger: CATAAATGCCATTAACAGTCAGGCTACTAATGAGTT...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCATTGCTGCTGGAACCTaGACAGAATTCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSIAAGT*TEFFTR
Trigger: TCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAAT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTCACACAATTATTCTaGGGCCTTTCAGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFTQLF*GLSESI
Trigger: GATGCTTTCTGAAAGGCCTCAGAATAATTGTGTGAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAACACAGTGACTGCACATaGGCTTTTGGTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKHSDCT*AFGKWS
Trigger: AGACCATTTACCAAAAGCTCATGTGCAGTCACTGTG...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATCTAGTGCCACACAGTaGCTGCACATGAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSSATQ*LHMSFW
Trigger: CCAAAAGCTCATGTGCAGTCACTGTGTGGCACTAGA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATCTAGTGCCACACAGTaGCTGCACATGAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKSSATQ*LHMSFW
Trigger: CCAAAAGCTCATGTGCAGTCACTGTGTGGCACTAGA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGTCTCTGAAGCCTGTTaGTTCAAGTGCTGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKVSEAC*FKCCFN
Trigger: GTTGAAACAGCACTTGAATCAACAGGCTTCAGAGAC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAAAATGGCTCAGTCTCTaGAGCCTGTTGATTCAAGTG +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKKWLSL*SLLIQV
Trigger: CACTTGAATCAACAGGCTTCAGAGACTGAGCCATTT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCTGTGCTGCCTGTTTATaGGGCTTATGTTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSCAACL*GLCCKR
Trigger: CCTTTTGCAACATAAGCCTCATAAACAGGCAGCACA...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAACCCATTTGGACATTATaGGTCTCGAACTCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKPIWTL*VSNSLD
Trigger: ATCAAGCGAGTTCGAGACTCATAATGTCCAAATGGG...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGAAAATATTGCATGTaGTGCAAGTTTTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGKYCM*CKFWVL
Trigger: CAAGACCCAAAACTTGCATCACATGCAATATTTTCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGGAAAATATTGCATGTaGTGCAAGTTTTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFGKYCM*CKFWVL
Trigger: CAAGACCCAAAACTTGCATCACATGCAATATTTTCC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAAGTTGCGCAGCTTGTTaGCCAGACATATCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKSCAAC*PDISWF
Trigger: AAACCAAGATATGTCTGGTCAACAAGCTGCGCAACT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACGATGGGAAATCATATTaGGTCTTGACAGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYDGKSY*VLTGVS
Trigger: GGATACACCTGTCAAGACTCAATATGATTTCCCATC...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGATGGGAAATCATATTaGGTCTTGACAGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEADGKSY*VLTGVS
Trigger: GGATACACCTGTCAAGACTCAATATGATTTCCCATC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTTCCCACACCAGGATaGGAATCACAATCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLPTPG*ESQSLQ
Trigger: CTGCAGTGATTGTGATTCTCATCCTGGTGTGGGAAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTTGTCGGCAAGTCTTaGCTGGCTCTGCTAACATCC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFVGKS*LALLTS
Trigger: GGATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAAGCAGAATAAGAGTTaGCAGACTCTGTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKKQNKS*QTLSEG
Trigger: ACCCTCAGACAGAGTCTGTCAACTCTTATTCTGCTT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGCAATTTCCCTACATaGTGTACATTTGGTCTAATG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGNFPT*CTFGLM
Trigger: CATTAGACCAAATGTACATCATGTAGGGAAATTGCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAATGGCTGCTTTTCCTaGCCATTAGCATCACTTAAT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFNGCFS*PLASLN
Trigger: ATTAAGTGATGCTAATGGTCAGGAAAAGCAGCCATT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAATGGCTGCTTTTCCTaGCCATTAGCATCACTTAAT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPNGCFS*PLASLN
Trigger: ATTAAGTGATGCTAATGGTCAGGAAAAGCAGCCATT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTACCAACAAAAGGGGGTaGTATCATATATATCTGTTG +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLTNKRG*YHIYLL
Trigger: CAACAGATATATATGATATCACCCCCTTTTGTTGGT...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGTGGTCTTTTCAAGTaGGGTAACCAACAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKCGLFK*GNQQKG
Trigger: CCCCTTTTGTTGGTTACCTCACTTGAAAAGACCACA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTACAGTATAGCATGTaGGATGAGCACCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLQYSM*DEHQKT
Trigger: TGTTTTCTGGTGCTCATCTCACATGCTATACTGTAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCAGCTTACAAAGATTTaGCCAATAAAACCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFQLTKI*PIKPKG
Trigger: GCCTTTGGGTTTTATTGGTCAAATCTTTGTAAGCTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACAGCTTACAAAGATTTaGCCAATAAAACCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPQLTKI*PIKPKG
Trigger: GCCTTTGGGTTTTATTGGTCAAATCTTTGTAAGCTG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACGTGACTTTTACAAACTaGAGGTTTGTGGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYVTFTN*RFVAIP
Trigger: TGGGATTGCCACAAACCTTCAGTTTGTAAAAGTCAC...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCATTGTGACTCTCTGGTaGATAGCACAGTGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSIVTLW*IAQCVV
Trigger: CACTACACACTGTGCTATTCACCAGAGAGTCACAAT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCTATATCTTCCCTTATaGCCAAAGCACCACCTACTG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSLYLPL*PKHHLL
Trigger: CAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTATGGACTTAGTCTGTTaGCCTCAACATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSMDLVC*PQHGWF
Trigger: GAACCAACCATGTTGAGGGCAACAGACTAAGTCCAT...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAATGGACTTAGTCTGTTaGCCTCAACATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKMDLVC*PQHGWF
Trigger: GAACCAACCATGTTGAGGGCAACAGACTAAGTCCAT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTAGACATTTGGTTGACTaGTTTCACCTGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVRHLVD*FHLDFF
Trigger: AAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGATTTTCAGGCCCACTaGAGTTATGTGTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFDFQAH*SYVLKN
Trigger: GTTTTTCAACACATAACTGCAGTGGGCCTGAAAATC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCTGGATGTTATTTTCTaGAGGAGATGGGCATATCTC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLLDVIF*RRWAYL
Trigger: GAGATATGCCCATCTCCTGCAGAAAATAACATCCAG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAACTCTGGGAAGGTGGTaGCTCAGGTTTACCCTCTAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPTLGRW*LRFTLY
Trigger: ATAGAGGGTAAACCTGAGGCACCACCTTCCCAGAGT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTAAAATTGGTGGGTTATaGTTGAGGTGTTCTGACATT +
Preference number: 4 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLKIGGL*LRCSDI
Trigger: AATGTCAGAACACCTCAAGCATAACCCACCAATTTT...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTGTTTCTCATCAACTaGTGGCAGTTGTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLFLIN*WQLSCS
Trigger: GCTACAGGACAACTGCCAGCAGTTGATGAGAAACAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGGTTGTGTTTGTGCTaGCTGTTTATGAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAWLCLC*LFMRLM
Trigger: CATAAGCCTCATAAACAGGCAGCACAAACACAACCA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATGTTTGCTGCTGTTCTTaGTTCTGTAAGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: KETLGALRVSALSFPPTHVCCCS*FCKRCH
Trigger: GTGGCATCTCTTACAGAAGCAAGAACAGCAGCAAAC...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGTTTGCTGCTGTTCTTaGTTCTGTAAGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKVCCCS*FCKRCH
Trigger: GTGGCATCTCTTACAGAAGCAAGAACAGCAGCAAAC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACCACATTATCACAGCTTaGAGGTGGATTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYHIITA*RWILLL
Trigger: AAGCAAGAGAATCCACCTGCAAGCTGTGATAATGTG...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCACATTATCACAGCTTaGAGGTGGATTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAHIITA*RWILLL
Trigger: AAGCAAGAGAATCCACCTGCAAGCTGTGATAATGTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCAACTGCTTCAGATGCTaGTCCATGGTCTCAATGATG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSNCFRC*SMVSMM
Trigger: CATCATTGAGACCATGGAGCAGCATCTGAAGCAGTT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGTGGCTATCAAGTTCTaGAGCAGTGGTTTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKVAIKF*SSGLSS
Trigger: ACTAGACAAACCACTGCTGCAGAACTTGATAGCCAC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCACTTCCTTGGGATCTTaGTTCTGGCAAACTTACATC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEATSLGS*FWQTYI
Trigger: GATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACAGACGGCACTCTGGTaGTCTGTGTTCATATTCAAT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKQTALW*SVFIFN
Trigger: ATTGAATATGAACACAGAGCACCAGAGTGCCGTCTG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGTCCATGTTTGGATTaGTCAGATTGGGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASPCLD*SDWVVI
Trigger: GATTACCACCCAATCTGAGCAATCCAAACATGGACT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGTGACCTTTCCCCACTaGCCACGTCATGAGAACTAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPVTFPH*PRHENY
Trigger: ATAGTTCTCATGACGTGGGCAGTGGGGAAAGGTCAC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATCCCCACCTTCTTTTTaGATAGAATGCTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSPPSF*IECFGL
Trigger: AAGACCAAAGCATTCTATGCAAAAAGAAGGTGGGGA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTTTGCTCATCAGCAGATaGATGGCTAAAAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVLLISR*MAKSKN
Trigger: ATTTTTGCTTTTAGCCATGCATCTGCTGATGAGCAA...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGATGTTTATTCATCTTATaGAGGCATCAGTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGCLFIL*RHQSAQ
Trigger: TTGAGCAGACTGATGCCTGCATAAGATGAATAAACA...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCACTTGCCAAACTCCTaGCTTACAATTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFHLPNS*LTIFPF
Trigger: AAAGGGAAAAATTGTAAGGCAGGAGTTTGGCAAGTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGGCCAACAGCCACTTaGCAAACTCCTGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPWPTAT*QTPALQ
Trigger: TTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGATTTCTCTAATAGCTaGCACATTAGGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKDFSNS*HIRTCS
Trigger: GGAGCAGGTCCTAATGTGGCAGCTATTAGAGAAATC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAATCTGCCCTGTGCCTTTaGGTTAATTACCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKSALCL*VNYLSS
Trigger: GGAAGAAAGGTAATTAACGCAAAGGCACAGGGCAGA...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGGATCATGTCCTATTaGCTGCTGCTGAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPWIMSY*LLLSPS
Trigger: AGATGGGCTCAGCAGCAGCCAATAGGACATGATCCA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGCCCTCAACATGGTTaGTTCTATCCTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKCPQHG*FYPVPS
Trigger: TGATGGAACAGGATAGAACCAACCATGTTGAGGGCA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACCTGGATTTCTTTCTTaGCTTACCCCGAAGTTACGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKPGFLS*LTPKLR
Trigger: ACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGACTGCTTTCACCTaGATTTCTTTCTTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLTAFT*ISFLAY
Trigger: GTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGATTTTCTGCACCGCAATaGAAACACAATCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGFSAPQ*KHNLDN
Trigger: ATTATCCAGATTGTGTTTCCATTGCGGTGCAGAAAA...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGCAGCTAGTTTACTaGCATTATCAGCATCATCAG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLQLVY*HYQHHQ
Trigger: CTGATGATGCTGATAATGCCAGTAAACTAGCTGCAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCAGACGCTAGCTTTGTaGTTCCCTGGATGTTATTTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAQTLAL*FPGCYF
Trigger: AAAATAACATCCAGGGAACCACAAAGCTAGCGTCTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTTGCAAATTGCTGCTaGAACCTGAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLANCC*NLNRIL
Trigger: AAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTGTGTTACTTTGGTTaGGGTAGTGGTGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALCYFG*GSGGVL
Trigger: AAGAACACCACCACTACCCCAACCAAAGTAACACAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCATACATGTGTAGATaGATTAGGACTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKAYMCR*IRTLGR
Trigger: CCTTCCCAGAGTCCTAATCCATCTACACATGTATGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCACTGCTACCAAAAATTaGTGGGTTATGCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEATATKN*WVMLEV
Trigger: CACCTCAAGCATAACCCACCAATTTTTGGTAGCAGT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGACTGCTACCAAAAATTaGTGGGTTATGCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLTATKN*WVMLEV
Trigger: CACCTCAAGCATAACCCACCAATTTTTGGTAGCAGT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCTTTCTCATCAACTGCTaGCAGTTGTCCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSFLINC*QLSCSS
Trigger: AGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAA...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTTCTCATCAACTGCTaGCAGTTGTCCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKFLINC*QLSCSS
Trigger: AGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACAGATAGTGCTGTGTTaGGGGCACAAGATCTCGTGT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPQIVLC*GHKISC
Trigger: ACACGAGATCTTGTGCCCCCAACACAGCACTATCTG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACAATTCAATCCATCCTaGTTTCAGATAGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPQFNPS*FQIVLC
Trigger: ACACAGCACTATCTGAAACCAGGATGGATTGAATTG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGGAGGTCATTTGATTaGAGAGATTGGGTTGATACT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFWRSFD*RDWVDT
Trigger: AGTATCAACCCAATCTCTCCAATCAAATGACCTCCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGAGGGTTTTTGGAACTaGAGATGTTGGTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKEGFWN*RCWSTV
Trigger: TACAGTGGACCAACATCTCCAGTTCCAAAAACCCTC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCGTAAATGGTCTGTTTTaGAGAAGTGCACCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSVNGLF*RSAPGV
Trigger: CACACCAGGTGCACTTCTCCAAAACAGACCATTTAC...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAGTAAATGGTCTGTTTTaGAGAAGTGCACCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKVNGLF*RSAPGV
Trigger: CACACCAGGTGCACTTCTCCAAAACAGACCATTTAC...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGTGCTGTTTCAACACTaGGGACATAAGTTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFVLFQH*GHKFFS
Trigger: ACTGAAAAACTTATGTCCCCAGTGTTGAAACAGCAC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGTGCTGTTTCAACACTaGGGACATAAGTTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPVLFQH*GHKFFS
Trigger: ACTGAAAAACTTATGTCCCCAGTGTTGAAACAGCAC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATCTTCCACTTTAGTCTaGCCAAAGAATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSSTLV*PKNDPS
Trigger: AGAAGGATCATTCTTTGGCCAGACTAAAGTGGAAGA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAATGCACTTGATTTCATaGTCTGACTATAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGMHLIS*SDYKGN
Trigger: ATTCCCCTTATAGTCAGACCATGAAATCAAGTGCAT...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGGCAAGACTCAGTTTaGGGTTGCTGTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPWQDSV*GCCVCC
Trigger: GCAGCAAACACAGCAACCCCAAACTGAGTCTTGCCA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAGGTTCCACCTTAATTaGCCTGTGCATCTGACTATG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKRFHLN*PVHLTM
Trigger: CATAGTCAGATGCACAGGCCAATTAAGGTGGAACCT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAAGGTTCCACCTTAATTaGCCTGTGCATCTGACTATG +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKRFHLN*PVHLTM
Trigger: CATAGTCAGATGCACAGGCCAATTAAGGTGGAACCT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGGTCAAATAACGACTTaGCGTGAAACTGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAGQITT*RETASD
Trigger: ATCTGAAGCAGTTTCACGCCAAGTCGTTATTTGACC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACAGAGTAAGAGCCTTATaGTCAAATAACGACTTGGCG +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYRVRAL*SNNDLA
Trigger: CGCCAAGTCGTTATTTGACCATAAGGCTCTTACTCT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAAGCAGCTGTTCTTTTaGTTGGTGTCTTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPKQLFF*LVSFLK
Trigger: CTTCAGAAAAGACACCAACCAAAAGAACAGCTGCTT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCCAACTGTTTAGCCTaGCTTGCGTTTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKANCLA*LAFSVC
Trigger: ACAAACTGAAAACGCAAGCCAGGCTAAACAGTTGGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGGATAAGGACTAACTaGATTGGGCCGTCTCATGTA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKWIRTN*IGPSHV
Trigger: TACATGAGACGGCCCAATCCAGTTAGTCCTTATCCA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTAGACAGAGGGTCTTaGCTTGGATACCTATACAGA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALDRGS*LGYLYR
Trigger: TCTGTATAGGTATCCAAGCCAAGACCCTCTGTCTAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTACATGATGTACATTTaGTCTAATGGTACAACTGCT +
Preference number: 4 (lower is better)
Translates to: FRELQVSLWPTATCQTPAYMMYI*SNGTTA
Trigger: AGCAGTTGTACCATTAGACCAAATGTACATCATGTA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACATCCATCTCATGAGTaGGATAAGGAGGCAATTTCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKHPSHE*DKEAIS
Trigger: GGAAATTGCCTCCTTATCCCACTCATGAGATGGATG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTATAGTCCATGTTTaGATTGCTCAGATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFIVHV*IAQIGW
Trigger: CCACCCAATCTGAGCAATCCAAACATGGACTATAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAACCCATTAGCTGTGTaGGAAAGCATGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKNPLAV*ESMSFS
Trigger: GGAGAATGACATGCTTTCCCACACAGCTAATGGGTT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTGTGTAAGCCTCCTTaGACACAAGCAGTTCTATCA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALCKPP*TQAVLS
Trigger: TGATAGAACTGCTTGTGTCCAAGGAGGCTTACACAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATACTACTGACAGGTTaGTTGTGGTCTTTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPILLTG*LWSFQV
Trigger: CACTTGAAAAGACCACAACCAACCTGTCAGTAGTAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACCATCTGTGACCACTTaGGAGCCAGTGAAAATTAAG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKPSVTT*EPVKIK
Trigger: CTTAATTTTCACTGGCTCCCAAGTGGTCACAGATGG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATTATTCAAGGGCACTaGAGTACACTGATAGCATCT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPIIQGH*STLIAS
Trigger: AGATGCTATCAGTGTACTCCAGTGCCCTTGAATAAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACTACAAGGACTTCACTaGATGAGCAAAATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLQGLH*MSKIQR
Trigger: CCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACATTCCTGTTCATGCCTaGGTTTTCTGGCATCCATCG +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNIPVHA*VFWHPS
Trigger: CGATGGATGCCAGAAAACCCAGGCATGAACAGGAAT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
3UTR CAA 72 bp CCAAGGCCCTTAAGAATTATGCTAAGTGTACCCTGCTaGTGTAGAGTAATGGAACAACAAAGTCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: PRPLRIMLSVPC*CRVMEQQSLDD
Trigger: ATCATCCAGACTTTGTTGTTCCATTACTCTACACAAGCAGGGTACACTTAGCATAATTCTTAAGGGCCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CAA 72 bp AGTCAATGCCTTGCTTCAAAGGACAGGCTGACTCTCTaGTTACAGGCTAATGCAGTTGATGATTTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: SQCLASKDRLTL*LQANAVDDFKL
Trigger: CAACTTAAAATCATCAACTGCATTAGCCTGTAACAAGAGAGTCAGCCTGTCCTTTGAAGCAAGGCATTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTCAATTTCTTGATCTaGAGGAGCCCAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKFNFLI*RSPERE
Trigger: TTCTCTCTCTGGGCTCCTTCAGATCAAGAAATTGAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACTCGGAGACATTTGGTTaGCTGCTTTCACCTGGATTT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNSETFG*LLSPGF
Trigger: AAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGA...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATATGCGATGGGTGAGTaGTCTCACAGGACAACTCAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPYAMGE*SHRTTH
Trigger: ATGAGTTGTCCTGTGAGATCACTCACCCATCGCATA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCACACTGAGCTTTGCTTaGAGTAAGCACCATTCATTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEATLSFA*SKHHSF
Trigger: AAATGAATGGTGCTTACTTCAAGCAAAGCTCAGTGT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGTGCTTTTTCCTTCTaGAGGAAGCTGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSAFSF*RKLRNL
Trigger: CAGGTTCCTCAGCTTCCTTCAGAAGGAAAAAGCACT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTCACACAATTATTCTaGGGCCTTTCAGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLFTQLF*GLSESI
Trigger: GATGCTTTCTGAAAGGCCTCAGAATAATTGTGTGAA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAATGCTTGAGGTGTTCTaGCATTGGTCTTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKMLEVF*HWSCFL
Trigger: GAGAAAACAAGACCAATGTCAGAACACCTCAAGCAT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAATGCTTGAGGTGTTCTaGCATTGGTCTTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKMLEVF*HWSCFL
Trigger: GAGAAAACAAGACCAATGTCAGAACACCTCAAGCAT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACCTTGGGACTGCCCTTaGTTCATTTCAACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPPWDCP*FISTWY
Trigger: GTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACTGTGCTGCCTGTTTATaGGGCTTATGTTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNCAACL*GLCCKR
Trigger: CCTTTTGCAACATAAGCCTCATAAACAGGCAGCACA...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACTTGTTGCTTTGGGGGTaGGGAAAAGTCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNLLLWG*GKVWSI
Trigger: AATACTCCAGACTTTTCCTCACCCCCAAAGCAACAA...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACCCCATTTGGACATTATaGGTCTCGAACTCGCTTGAT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNPIWTL*VSNSLD
Trigger: ATCAAGCGAGTTCGAGACTCATAATGTCCAAATGGG...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAATCAAGTACCTTTGCTaGGCAAGTTGCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPIKYLC*ASCAAC
Trigger: ACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTGAT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGATTGGCCTGTGCATCTaGCTATGGCAAGACTCAGTT +
Preference number: 4 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVIGLCI*LWQDSV
Trigger: AACTGAGTCTTGCCATAGTCAGATGCACAGGCCAAT...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAATAACGACTTGGCGTaGAACTGCTTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPNNDLA*NCFRCC
Trigger: GCAGCATCTGAAGCAGTTTCACGCCAAGTCGTTATT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTTACTTGCTTCTGTaGTTTGAGAGTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFYLLL*FESKSL
Trigger: AAGGCTCTTACTCTCAAATCACAGAAGCAAGTAAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTTTACTTGCTTCTGTaGTTTGAGAGTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPFYLLL*FESKSL
Trigger: AAGGCTCTTACTCTCAAATCACAGAAGCAAGTAAAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAGATGGGAAATCATATTaGGTCTTGACAGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKDGKSY*VLTGVS
Trigger: GGATACACCTGTCAAGACTCAATATGATTTCCCATC...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGATGGGAAATCATATTaGGTCTTGACAGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKDGKSY*VLTGVS
Trigger: GGATACACCTGTCAAGACTCAATATGATTTCCCATC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCAATAGGACATCCCTaGGAACTTTTGCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKAIGHP*ELLPSL
Trigger: TAAAGAAGGCAAAAGTTCTCAGGGATGTCCTATTGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTCCATTGCATTGATATaGTGGATATTGGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFSIALI*WILGIL
Trigger: CAGAATACCCAATATCCATCATATCAATGCAATGGA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGGCAATTTCCCTACATaGTGTACATTTGGTCTAATG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAGNFPT*CTFGLM
Trigger: CATTAGACCAAATGTACATCATGTAGGGAAATTGCC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGATCCTGGTGGGGTaGTTCCTATTGGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPEILVG*FLLGFF
Trigger: AAAGAATCCCAATAGGAATCACCCCACCAGGATCTC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTACCAACAAAAGGGGGTaGTATCATATATATCTGTTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFTNKRG*YHIYLL
Trigger: CAACAGATATATATGATATCACCCCCTTTTGTTGGT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAACCAACAAAAGGGGGTaGTATCATATATATCTGTTG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPTNKRG*YHIYLL
Trigger: CAACAGATATATATGATATCACCCCCTTTTGTTGGT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGCGATCTGTGATCAGTaGTCTTTGATGTTACTATTC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLAICDQ*SLMLLF
Trigger: GAATAGTAACATCAAAGATCACTGATCACAGATCGC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACTGTTATGGCGATCTGTaGTCAGTGATCTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYCYGDL*SVIFDV
Trigger: AACATCAAAGATCACTGATCACAGATCGCCATAACA...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAAGATTTTCAGGCCCACTaGAGTTATGTGTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: WIRAKYIESLLERYHHLEDFQAH*SYVLKN
Trigger: GTTTTTCAACACATAACTGCAGTGGGCCTGAAAATC...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACGATTTTCAGGCCCACTaGAGTTATGTGTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYDFQAH*SYVLKN
Trigger: GTTTTTCAACACATAACTGCAGTGGGCCTGAAAATC...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAAAATTGGTGGGTTATaGTTGAGGTGTTCTGACATT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPKIGGL*LRCSDI
Trigger: AATGTCAGAACACCTCAAGCATAACCCACCAATTTT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCCTGTAGCTCTCCACTaGTACCAAAAATTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMPVALH*YQKLVG
Trigger: ACCCACCAATTTTTGGTAGCAGTGGAGAGCTACAGG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACTTGTTTCTCATCAACTaGTGGCAGTTGTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNLFLIN*WQLSCS
Trigger: GCTACAGGACAACTGCCAGCAGTTGATGAGAAACAA...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAACAAGATCTCGTGTTTaGTCCTTGTCTCGACCCTTC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPTRSRV*SLSRPF
Trigger: GAAGGGTCGAGACAAGGAGCAAACACGAGATCTTGT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTACATTTGTGACTTGTaGTCCAGCTGTGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLYICDL*SSCVVF
Trigger: GAAAACAACACAGCTGGAGCACAAGTCACAAATGTA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTACATTTGTGACTTGTaGTCCAGCTGTGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAYICDL*SSCVVF
Trigger: GAAAACAACACAGCTGGAGCACAAGTCACAAATGTA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCTGGTTGTGTTTGTGCTaGCTGTTTATGAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSWLCLC*LFMRLM
Trigger: CATAAGCCTCATAAACAGGCAGCACAAACACAACCA...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACACATTATCACAGCTTaGAGGTGGATTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKHIITA*RWILLL
Trigger: AAGCAAGAGAATCCACCTGCAAGCTGTGATAATGTG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATCAATGATGCTCTTTTaGTGCACATTATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSMMLF*CTLSQL
Trigger: AAGCTGTGATAATGTGCAGCAAAAGAGCATCATTGA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTCCCCACCTTCTTTTTaGATAGAATGCTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASPPSF*IECFGL
Trigger: AAGACCAAAGCATTCTATGCAAAAAGAAGGTGGGGA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGCTCATCAGCAGATaGATGGCTAAAAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLLISR*MAKSKN
Trigger: ATTTTTGCTTTTAGCCATGCATCTGCTGATGAGCAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATGTTTATTCATCTTATaGAGGCATCAGTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPCLFIL*RHQSAQ
Trigger: TTGAGCAGACTGATGCCTGCATAAGATGAATAAACA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTAGTTCAATATCCTATTaGCAAACTAGTGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVSSISY*QTSVEV
Trigger: TACCTCAACACTAGTTTGGCAATAGGATATTGAACT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR GCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACCTTATTTTAAGAAATTaGCACACACACAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYLILRN*HTHSHP
Trigger: GGGATGGCTGTGTGTGTGGCAATTTCTTAAAATAAG...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGATGAAAGGCCTTCTCTaGATTATCTCGCTCATAAGA +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLMKGLL*IISLIR
Trigger: TCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCAT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAACTGTTGCCCTCAACATaGTTGGTTCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKLLPST*LVLSCS
Trigger: GGAACAGGATAGAACCAACCATGTTGAGGGCAACAG...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGTCTCCATTTACTTCTaGATGAGCTCTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPVSIYF*MSSLRQ
Trigger: CTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGAC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTCACACGACTATTCTaGCTTCCCTTCATACAGGGT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLTRLF*LPFIQG
Trigger: ACCCTGTATGAAGGGAAGCCAGAATAGTCGTGTGAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACCCTGGATTTCTTTCTTaGCTTACCCCGAAGTTACGT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNPGFLS*LTPKLR
Trigger: ACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGG...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTAACTGCATTTTCTTaGGCTACAGAACTCACAGAT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLTAFS*ATELTD
Trigger: ATCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGCAGAATCTGAAGCTCTaGATTTTCAGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVQNLKL*IFRPTA
Trigger: TGCAGTGGGCCTGAAAATCCAGAGCTTCAGATTCTG...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCTACCAAAAATTGGTaGGTTATGCTTGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKATKNW*VMLEVF
Trigger: GAACACCTCAAGCATAACCCACCAATTTTTGGTAGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAGCTACCAAAAATTGGTaGGTTATGCTTGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKATKNW*VMLEVF
Trigger: GAACACCTCAAGCATAACCCACCAATTTTTGGTAGC...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCACTGCTACCAAAAATTaGTGGGTTATGCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSTATKN*WVMLEV
Trigger: CACCTCAAGCATAACCCACCAATTTTTGGTAGCAGT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCAATTCAATCCATCCTaGTTTCAGATAGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLQFNPS*FQIVLC
Trigger: ACACAGCACTATCTGAAACCAGGATGGATTGAATTG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCAATTCAATCCATCCTaGTTTCAGATAGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAQFNPS*FQIVLC
Trigger: ACACAGCACTATCTGAAACCAGGATGGATTGAATTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTGGAGGTCATTTGATTaGAGAGATTGGGTTGATACT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLWRSFD*RDWVDT
Trigger: AGTATCAACCCAATCTCTCCAATCAAATGACCTCCA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTCCAGTGTATTGTTTaGAGGTCATTTGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFQCIV*RSFDWR
Trigger: TCTCCAATCAAATGACCTCCAAACAATACACTGGAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATTGGAGAAGTGCACCTaGTGTGAGGGTTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKLEKCT*CEGFWN
Trigger: GTTCCAAAAACCCTCACACCAGGTGCACTTCTCCAA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAATCTTCCACTTTAGTCTaGCCAAAGAATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: WIRAKYIESLLERYHHLESSTLV*PKNDPS
Trigger: AGAAGGATCATTCTTTGGCCAGACTAAAGTGGAAGA...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACTCTTCCACTTTAGTCTaGCCAAAGAATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYSSTLV*PKNDPS
Trigger: AGAAGGATCATTCTTTGGCCAGACTAAAGTGGAAGA...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACAGGTTCCACCTTAATTaGCCTGTGCATCTGACTATG +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNRFHLN*PVHLTM
Trigger: CATAGTCAGATGCACAGGCCAATTAAGGTGGAACCT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAACCATGTTTTGTTTTCTaGTGGTGCTGTGTGCATACA +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKPCFVF*WCCVHT
Trigger: TGTATGCACACAGCACCACCAGAAAACAAAACATGG...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACCATGTTTTGTTTTCTaGTGGTGCTGTGTGCATACA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKPCFVF*WCCVHT
Trigger: TGTATGCACACAGCACCACCAGAAAACAAAACATGG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAGAGTAAGAGCCTTATaGTCAAATAACGACTTGGCG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKRVRAL*SNNDLA
Trigger: CGCCAAGTCGTTATTTGACCATAAGGCTCTTACTCT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATCTAAAGCTGGGGTGTaGCTATCAAGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSKAGV*LSSSAA
Trigger: TGCTGCAGAACTTGATAGCCACACCCCAGCTTTAGA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAAGCAGCTGTTCTTTTaGTTGGTGTCTTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAKQLFF*LVSFLK
Trigger: CTTCAGAAAAGACACCAACCAAAAGAACAGCTGCTT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAAGTTTCTTATATGTTaGTGCCATAAGAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFKFLIC*CHKSGQ
Trigger: CTGTCCACTCTTATGGCACCAACATATAAGAAACTT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTCATGTATGGATTGGTaGATCCAGAAGCAGAATAAG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASCMDW*IQKQNK
Trigger: CTTATTCTGCTTCTGGATCCACCAATCCATACATGA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTAGATGTAAAACTCTaGCTATTTCCAAACCTTGGC +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLDVKL*LFPNLG
Trigger: GCCAAGGTTTGGAAATAGCCAGAGTTTTACATCTAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTGAGGCACATAGTCTaGGCCATACTTTTCACACTC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLRHIV*AILFTL
Trigger: GAGTGTGAAAAGTATGGCCCAGACTATGTGCCTCAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTACTGTGGAGTCTGTaGTCACGGACATGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLLWSL*SRTWSF
Trigger: AAAGGACCATGTCCGTGACCACAGACTCCACAGTAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCATACTACTGACAGGTTaGTTGTGGTCTTTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAILLTG*LWSFQV
Trigger: CACTTGAAAAGACCACAACCAACCTGTCAGTAGTAT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGCATAGAATGCTTTaGTCTTTTCCTAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLHRML*SFPRCH
Trigger: ATGGCATCTAGGAAAAGACCAAAGCATTCTATGCAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAACACTTTATTATCAGGTaGGAAAGCCAGAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKHFIIR*ESQSGT
Trigger: GGTCCCACTCTGGCTTTCCCACCTGATAATAAAGTG...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCTACGCCAAGCAAACTaGATAATGGTTTTTAAGCCT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLLRQAN*IMVFKP
Trigger: AGGCTTAAAAACCATTATCCAGTTTGCTTGGCGTAG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTCGGAGACATTTGGTTaGCTGCTTTCACCTGGATTT +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMSETFG*LLSPGF
Trigger: AAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTAATGGCATTTATGTaGGATGTGGTTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLMAFM*DVVFCT
Trigger: GGTGCAGAAAACCACATCTCACATAAATGCCATTAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAACTTGGTACATTTGTaGCTTGTGCTCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPNLVHL*LVLQLC
Trigger: ACACAGCTGGAGCACAAGTCACAAATGTACCAAGTT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGTCTCTGAAGCCTGTTaGTTCAAGTGCTGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPVSEAC*FKCCFN
Trigger: GTTGAAACAGCACTTGAATCAACAGGCTTCAGAGAC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGTGCTGCCTGTTTATaGGGCTTATGTTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPCAACL*GLCCKR
Trigger: CCTTTTGCAACATAAGCCTCATAAACAGGCAGCACA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGTTGTTGCTTTGGGGGTaGGGAAAAGTCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVLLLWG*GKVWSI
Trigger: AATACTCCAGACTTTTCCTCACCCCCAAAGCAACAA...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTGTTGCTTTGGGGGTaGGGAAAAGTCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLLLWG*GKVWSI
Trigger: AATACTCCAGACTTTTCCTCACCCCCAAAGCAACAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAAGTCTGGCCAAAGAATaGTCCTTCTCTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKSLAKE*SFSLLI
Trigger: GATCAGCAAAGAGAAGGATCATTCTTTGGCCAGACT...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATGGAAAATATTGCATGTaGTGCAAGTTTTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: KETLGALRVSALSFPPTHGKYCM*CKFWVL
Trigger: CAAGACCCAAAACTTGCATCACATGCAATATTTTCC...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGTTGCGCAGCTTGTTaGCCAGACATATCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSCAAC*PDISWF
Trigger: AAACCAAGATATGTCTGGTCAACAAGCTGCGCAACT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTTACTTGCTTCTGTaGTTTGAGAGTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAFYLLL*FESKSL
Trigger: AAGGCTCTTACTCTCAAATCACAGAAGCAAGTAAAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGGTTGGTGTCTTTTCTaGAGAAGTTGTTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPGWCLF*RSCLLL
Trigger: GAGCAGCAAACAACTTCTTCAGAAAAGACACCAACC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAAAGAACTCAGTACCTaGATGGCACCACTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPKELST*MAPLRF
Trigger: AAAACGGAGTGGTGCCATTCAGGTACTGAGTTCTTT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGGTTTCCATTGCATTaGTATGATGGATATTGGGTA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEARFPLH*YDGYWV
Trigger: TACCCAATATCCATCATATCAATGCAATGGAAACCT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGCTTTGCACACTCAATaGGAATTGACCCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPALHTQ*ELTHEL
Trigger: CAACTCATGGGTCAATTCTCATTGAGTGTGCAAAGC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACCACTTGGGAGCCAGTaGAAATTAAGTGCTATGGTA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPPLGSQ*KLSAMV
Trigger: TACCATAGCACTTAATTTTCACTGGCTCCCAAGTGG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAGCACCATCATGATGTaGATTCTGCTTCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKSTIMM*ILLQTH
Trigger: ATGAGTTTGAAGCAGAATTCACATCATGATGGTGCT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACAGCTTCAGATTTTTATaGGCCTTTACAAATTGCTGC +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYSFRFL*AFTNCC
Trigger: GCAGCAATTTGTAAAGGCTCATAAAAATCTGAAGCT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAAACCCACAATATCTCTaGGGTATGCCTGTATCATAT +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKNPQYL*GMPVSY
Trigger: ATATGATACAGGCATACCTCAGAGATATTGTGGGTT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACCTGTTAATACAACATTaGTTCTGCAGCCTATGGATT +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYLLIQH*FCSLWI
Trigger: AATCCATAGGCTGCAGAATCAATGTTGTATTAACAG...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGATGGACTTAGTCTGTTaGCCTCAACATGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMMDLVC*PQHGWF
Trigger: GAACCAACCATGTTGAGGGCAACAGACTAAGTCCAT...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACAGACATTTGGTTGACTaGTTTCACCTGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYRHLVD*FHLDFF
Trigger: AAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGACATTTGGTTGACTaGTTTCACCTGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEARHLVD*FHLDFF
Trigger: AAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGATTTTCAGGCCCACTaGAGTTATGTGTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKDFQAH*SYVLKN
Trigger: GTTTTTCAACACATAACTGCAGTGGGCCTGAAAATC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAAAATTGGTGGGTTATaGTTGAGGTGTTCTGACATT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAKIGGL*LRCSDI
Trigger: AATGTCAGAACACCTCAAGCATAACCCACCAATTTT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGTTGTTTCTCATCAACTaGTGGCAGTTGTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVLFLIN*WQLSCS
Trigger: GCTACAGGACAACTGCCAGCAGTTGATGAGAAACAA...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTGTTTCTCATCAACTaGTGGCAGTTGTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLFLIN*WQLSCS
Trigger: GCTACAGGACAACTGCCAGCAGTTGATGAGAAACAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATACATTTGTGACTTGTaGTCCAGCTGTGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKYICDL*SSCVVF
Trigger: GAAAACAACACAGCTGGAGCACAAGTCACAAATGTA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAAGAAACCTGTATTTTaGATGCACTTGATTTCATGG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPKKPVF*MHLISW
Trigger: CCATGAAATCAAGTGCATGCAAAATACAGGTTTCTT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAAGAAACCTGTATTTTaGATGCACTTGATTTCATGG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFKKPVF*MHLISW
Trigger: CCATGAAATCAAGTGCATGCAAAATACAGGTTTCTT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAGTTTGCTGCTGTTCTTaGTTCTGTAAGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKVCCCS*FCKRCH
Trigger: GTGGCATCTCTTACAGAAGCAAGAACAGCAGCAAAC...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAATGATGCTCTTTTGCTaGACATTATCACAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKMMLFC*TLSQLA
Trigger: TGCAAGCTGTGATAATGTGCAGCAAAAGAGCATCAT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCATGATGCTCTTTTGCTaGACATTATCACAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSMMLFC*TLSQLA
Trigger: TGCAAGCTGTGATAATGTGCAGCAAAAGAGCATCAT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACTCAATGATGCTCTTTTaGTGCACATTATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYSMMLF*CTLSQL
Trigger: AAGCTGTGATAATGTGCAGCAAAAGAGCATCATTGA...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGAACTGCTTCAGATGCTaGTCCATGGTCTCAATGATG +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMNCFRC*SMVSMM
Trigger: CATCATTGAGACCATGGAGCAGCATCTGAAGCAGTT...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGGTGGCTATCAAGTTCTaGAGCAGTGGTTTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMVAIKF*SSGLSS
Trigger: ACTAGACAAACCACTGCTGCAGAACTTGATAGCCAC...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGTGGCTATCAAGTTCTaGAGCAGTGGTTTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPVAIKF*SSGLSS
Trigger: ACTAGACAAACCACTGCTGCAGAACTTGATAGCCAC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTCTTATATGTTGGTaGCATAAGAGTGGACAGGTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAFLICW*HKSGQV
Trigger: AACCTGTCCACTCTTATGGCACCAACATATAAGAAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACAGACGGCACTCTGGTaGTCTGTGTTCATATTCAAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPQTALW*SVFIFN
Trigger: ATTGAATATGAACACAGAGCACCAGAGTGCCGTCTG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGTGCATACCAATGTaGTGCCATTCTGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPECIPM*CHSACC
Trigger: ACAACATGCAGAATGGCAGCACATTGGTATGCACTC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGTTTATTCATCTTATaGAGGCATCAGTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEACLFIL*RHQSAQ
Trigger: TTGAGCAGACTGATGCCTGCATAAGATGAATAAACA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAATGATGGTACACAATaGTTTCACTCTCAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFNDGTQ*FHSQFN
Trigger: ATTGAACTGAGAGTGAAAGCATTGTGTACCATCATT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAGATTTCTCTAATAGCTaGCACATTAGGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKDFSNS*HIRTCS
Trigger: GGAGCAGGTCCTAATGTGGCAGCTATTAGAGAAATC...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACTTTACAATTGTTTACTaGTTTGTGTGTGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYFTIVY*FVCEGW
Trigger: CCAGCCTTCACACACAAAGCAGTAAACAATTGTAAA...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTTGCTCTACACATCTaGAAGATGGGAAATCATATT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPFALHI*KMGNHI
Trigger: AATATGATTTCCCATCTTGCAGATGTGTAGAGCAAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTGCTCTACACATCTaGAAGATGGGAAATCATATT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFALHI*KMGNHI
Trigger: AATATGATTTCCCATCTTGCAGATGTGTAGAGCAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGCCCTCAACATGGTTaGTTCTATCCTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPCPQHG*FYPVPS
Trigger: TGATGGAACAGGATAGAACCAACCATGTTGAGGGCA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTGCCCTCAACATGGTTaGTTCTATCCTGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMCPQHG*FYPVPS
Trigger: TGATGGAACAGGATAGAACCAACCATGTTGAGGGCA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCATTTTGCAAACACTTaGAATACCCTCTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFHFANT*NTLYFL
Trigger: AAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACATTTTGCAAACACTTaGAATACCCTCTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPHFANT*NTLYFL
Trigger: AAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTGCAGCTAGTTTACTaGCATTATCAGCATCATCAG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLQLVY*HYQHHQ
Trigger: CTGATGATGCTGATAATGCCAGTAAACTAGCTGCAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTTTGCAGCTAGTTTACTaGCATTATCAGCATCATCAG +
Preference number: 4 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSLQLVY*HYQHHQ
Trigger: CTGATGATGCTGATAATGCCAGTAAACTAGCTGCAA...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAATTGCAGCTAGTTTACTaGCATTATCAGCATCATCAG +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKLQLVY*HYQHHQ
Trigger: CTGATGATGCTGATAATGCCAGTAAACTAGCTGCAA...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACTTGCAAATTGCTGCTaGAACCTGAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLANCC*NLNRIL
Trigger: AAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTTGATTGGAGAGATTaGGTTGATACTGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPFDWRD*VDTEEL
Trigger: CAATTCTTCAGTATCAACCCAATCTCTCCAATCAAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTGATTGGAGAGATTaGGTTGATACTGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFDWRD*VDTEEL
Trigger: CAATTCTTCAGTATCAACCCAATCTCTCCAATCAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAATGGAGGTCATTTGATTaGAGAGATTGGGTTGATACT +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKWRSFD*RDWVDT
Trigger: AGTATCAACCCAATCTCTCCAATCAAATGACCTCCA...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGGAGGTCATTTGATTaGAGAGATTGGGTTGATACT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKWRSFD*RDWVDT
Trigger: AGTATCAACCCAATCTCTCCAATCAAATGACCTCCA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGGTTTTTGGAACTaGAGATGTTGGTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPEGFWN*RCWSTV
Trigger: TACAGTGGACCAACATCTCCAGTTCCAAAAACCCTC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGTAAATGGTCTGTTTTaGAGAAGTGCACCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPVNGLF*RSAPGV
Trigger: CACACCAGGTGCACTTCTCCAAAACAGACCATTTAC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATCTTCCACTTTAGTCTaGCCAAAGAATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKSSTLV*PKNDPS
Trigger: AGAAGGATCATTCTTTGGCCAGACTAAAGTGGAAGA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGATGCACTTGATTTCATaGTCTGACTATAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLMHLIS*SDYKGN
Trigger: ATTCCCCTTATAGTCAGACCATGAAATCAAGTGCAT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAAAGCAGCTGTTCTTTTaGTTGGTGTCTTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKKQLFF*LVSFLK
Trigger: CTTCAGAAAAGACACCAACCAAAAGAACAGCTGCTT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATACACATCTGCAAGATaGGAAATCATATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPYTSAR*EIILSL
Trigger: AAGACTCAATATGATTTCCCATCTTGCAGATGTGTA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTTCTCTTCCTCTTTTaGGTCATCCCCAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFLFLF*VIPKQL
Trigger: AAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCTATTTCCAAACCTTaGCTGGTAAAGTGTATGGAT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKAISKP*LVKCMD
Trigger: ATCCATACACTTTACCAGCCAAGGTTTGGAAATAGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAATTATTCAAGGGCACTaGAGTACACTGATAGCATCT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKIIQGH*STLIAS
Trigger: AGATGCTATCAGTGTACTCCAGTGCCCTTGAATAAT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATCCTTCTACACAGTGTaGGGTATCTCATTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKSFYTV*GISLQE
Trigger: CTCTTGCAATGAGATACCCCACACTGTGTAGAAGGA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CAA 72 bp TTTCTTATATGTTGGTGCCATAAGAGTGGACAGGTTTaGCAAATGAGACTCCAGTTTCTCTTCCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: FLICWCHKSGQV*QMRLQFLFLFW
Trigger: CCAAAAGAGGAAGAGAAACTGGAGTCTCATTTGCAAAACCTGTCCACTCTTATGGCACCAACATATAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAATTCATAAGGCAGTTTaGCGTCTGTTCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPIHKAV*RLFSSL
Trigger: GAGTGATGAGAACAGACGTCAAACTGCCTTATGAAT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265149.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTCCATAATAACTTTTaGAAGAGTGCCACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKFHNNF*KSATWC
Trigger: ACACCAAGTGGCACTCTTTCAAAAGTTATTATGGAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTCAATTTCTTGATCTaGAGGAGCCCAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFNFLI*RSPERE
Trigger: TTCTCTCTCTGGGCTCCTTCAGATCAAGAAATTGAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTTGTTTCAATTTCTTaGTCTGAAGGAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLVSIS*SEGAQR
Trigger: TCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAACTCATTAGTAGCCTaGCTGTTAATGGCATTTATG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKNSLVA*LLMAFM
Trigger: CATAAATGCCATTAACAGTCAGGCTACTAATGAGTT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAATGCTTGAGGTGTTCTaGCATTGGTCTTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPMLEVF*HWSCFL
Trigger: GAGAAAACAAGACCAATGTCAGAACACCTCAAGCAT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGCAATAGGACATCCCTaGGAACTTTTGCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPAIGHP*ELLPSL
Trigger: TAAAGAAGGCAAAAGTTCTCAGGGATGTCCTATTGC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACACTCCAGTGAACACATaGAAGGTAAGAAAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNTPVNT*KVRKQN
Trigger: GTTTTGCTTTCTTACCTTTCATGTGTTCACTGGAGT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR TCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACGAGTCACAGTTACTGTaGCTTTTACAAACTGAAGGT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNESQLL*LLQTEG
Trigger: ACCTTCAGTTTGTAAAAGTCACAGTAACTGTGACTC...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTGGATGTTATTTTCTaGAGGAGATGGGCATATCTC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLDVIF*RRWAYL
Trigger: GAGATATGCCCATCTCCTGCAGAAAATAACATCCAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGGAGCTTGCAAATTGCTaGTGGAACCTGAACAGAATT +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMELANC*WNLNRI
Trigger: AATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTC...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCACATTATCACAGCTTaGAGGTGGATTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMHIITA*RWILLL
Trigger: AAGCAAGAGAATCCACCTGCAAGCTGTGATAATGTG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACATGATGCTCTTTTGCTaGACATTATCACAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNMMLFC*TLSQLA
Trigger: TGCAAGCTGTGATAATGTGCAGCAAAAGAGCATCAT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTTCTTATATGTTGGTaGCATAAGAGTGGACAGGTT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKFLICW*HKSGQV
Trigger: AACCTGTCCACTCTTATGGCACCAACATATAAGAAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGTCCATGTTTGGATTaGTCAGATTGGGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSPCLD*SDWVVI
Trigger: GATTACCACCCAATCTGAGCAATCCAAACATGGACT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAATGCAGGCATCAGTCTaGTCAATCCTCTTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPMQASV*SILLLK
Trigger: CTTTAACAAGAGGATTGAGCAGACTGATGCCTGCAT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAGTTCGTACATTAGACTaGCTATGGTCGTTATTTTCT +
Preference number: 4 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKVRTLD*LWSLFS
Trigger: AGAAAATAACGACCATAGGCAGTCTAATGTACGAAC...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACCTGCTGTGGGTTAAATaGTATCAAACAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNLLWVK*YQTALH
Trigger: ATGCAATGCTGTTTGATAGCATTTAACCCACAGCAG...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTATGAAAGGCCTTCTCTaGATTATCTCGCTCATAAGA +
Preference number: 4 (lower is better)
Translates to: DKAAAQFERTESNFQRNSMKGLL*IISLIR
Trigger: TCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCAT...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTGCTCTACACATCTaGAAGATGGGAAATCATATT +
Preference number: 4 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLFALHI*KMGNHI
Trigger: AATATGATTTCCCATCTTGCAGATGTGTAGAGCAAA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413648.2
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCATTTTGCAAACACTTaGAATACCCTCTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAHFANT*NTLYFL
Trigger: AAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAACAGACGCTAGCTTTGTaGTTCCCTGGATGTTATTTT +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKQTLAL*FPGCYF
Trigger: AAAATAACATCCAGGGAACCACAAAGCTAGCGTCTG...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTGTGTTACTTTGGTTaGGGTAGTGGTGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLCYFG*GSGGVL
Trigger: AAGAACACCACCACTACCCCAACCAAAGTAACACAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATTTCTCAGAACACAATaGAACAGTCATTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKFLRTQ*NSHCPC
Trigger: GCAGGGACAATGACTGTTCCATTGTGTTCTGAGAAA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGCTACCAAAAATTGGTaGGTTATGCTTGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPATKNW*VMLEVF
Trigger: GAACACCTCAAGCATAACCCACCAATTTTTGGTAGC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACCAATTCAATCCATCCTaGTTTCAGATAGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNQFNPS*FQIVLC
Trigger: ACACAGCACTATCTGAAACCAGGATGGATTGAATTG...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACGTGCTGTTTCAACACTaGGGACATAAGTTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNVLFQH*GHKFFS
Trigger: ACTGAAAAACTTATGTCCCCAGTGTTGAAACAGCAC...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAATGCACTTGATTTCATaGTCTGACTATAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKMHLIS*SDYKGN
Trigger: ATTCCCCTTATAGTCAGACCATGAAATCAAGTGCAT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACCATGTTTTGTTTTCTaGTGGTGCTGTGTGCATACA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPPCFVF*WCCVHT
Trigger: TGTATGCACACAGCACCACCAGAAAACAAAACATGG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAATCACAGCTTGCAGGTaGATTCTCTTGCTTAGTTAC +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKITACR*ILLLSY
Trigger: GTAACTAAGCAAGAGAATCCACCTGCAAGCTGTGAT...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGGTCAAATAACGACTTaGCGTGAAACTGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPGQITT*RETASD
Trigger: ATCTGAAGCAGTTTCACGCCAAGTCGTTATTTGACC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGAGTAAGAGCCTTATaGTCAAATAACGACTTGGCG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPRVRAL*SNNDLA
Trigger: CGCCAAGTCGTTATTTGACCATAAGGCTCTTACTCT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACAAGCAGCTGTTCTTTTaGTTGGTGTCTTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNKQLFF*LVSFLK
Trigger: CTTCAGAAAAGACACCAACCAAAAGAACAGCTGCTT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGTCTCATGTATGGATTaGTGGATCCAGAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPVSCMD*WIQKQN
Trigger: ATTCTGCTTCTGGATCCACCAATCCATACATGAGAC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTACATGATGTACATTTaGTCTAATGGTACAACTGCT +
Preference number: 4 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAYMMYI*SNGTTA
Trigger: AGCAGTTGTACCATTAGACCAAATGTACATCATGTA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTGTGTAAGCCTCCTTaGACACAAGCAGTTCTATCA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLCKPP*TQAVLS
Trigger: TGATAGAACTGCTTGTGTCCAAGGAGGCTTACACAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCTTTAGAAAAGGAGGCTaGCAAATAGTTAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSFRKGG*QIVSIQ
Trigger: CTGGATACTAACTATTTGCCAGCCTCCTTTTCTAAA...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTAATGGCATTTATGTaGGATGTGGTTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLMAFM*DVVFCT
Trigger: GGTGCAGAAAACCACATCTCACATAAATGCCATTAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTCACACAATTATTCTaGGGCCTTTCAGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFTQLF*GLSESI
Trigger: GATGCTTTCTGAAAGGCCTCAGAATAATTGTGTGAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGGAAAATATTGCATGTaGTGCAAGTTTTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPGKYCM*CKFWVL
Trigger: CAAGACCCAAAACTTGCATCACATGCAATATTTTCC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGGGAAAATATTGCATGTaGTGCAAGTTTTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMGKYCM*CKFWVL
Trigger: CAAGACCCAAAACTTGCATCACATGCAATATTTTCC...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTACAGTATAGCATGTaGGATGAGCACCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLQYSM*DEHQKT
Trigger: TGTTTTCTGGTGCTCATCTCACATGCTATACTGTAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATGCCAGGCCACTAGATaGTTATTTAGTGAACTTCTA +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKCQATR*LFSELL
Trigger: TAGAAGTTCACTAAATAATCATCTAGTGGCCTGGCA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGATTTTCAGGCCCACTaGAGTTATGTGTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPDFQAH*SYVLKN
Trigger: GTTTTTCAACACATAACTGCAGTGGGCCTGAAAATC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAAGAAACCTGTATTTTaGATGCACTTGATTTCATGG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKKKPVF*MHLISW
Trigger: CCATGAAATCAAGTGCATGCAAAATACAGGTTTCTT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAGTTCAATATCCTATTaGCAAACTAGTGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKSSISY*QTSVEV
Trigger: TACCTCAACACTAGTTTGGCAATAGGATATTGAACT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAATGATGGTACACAATaGTTTCACTCTCAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKNDGTQ*FHSQFN
Trigger: ATTGAACTGAGAGTGAAAGCATTGTGTACCATCATT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCTTTCAAAATATTACTaGTCAAGGCACCTAGTCACC +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMLSKYY*SRHLVT
Trigger: GGTGACTAGGTGCCTTGAGCAGTAATATTTTGAAAG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGATAGATAGAAGTCAATaGCTTGCTTCAAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMIDRSQ*LASKDR
Trigger: CCTGTCCTTTGAAGCAAGGCATTGACTTCTATCTAT...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR GCA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACTTTACAATTGTTTACTaGTTTGTGTGTGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HLGKFTISARPLDDYLVNFTIVY*FVCEGW
Trigger: CCAGCCTTCACACACAAAGCAGTAAACAATTGTAAA...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR GCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTTGCTCTACACATCTaGAAGATGGGAAATCATATT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKFALHI*KMGNHI
Trigger: AATATGATTTCCCATCTTGCAGATGTGTAGAGCAAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTGCAGCTAGTTTACTaGCATTATCAGCATCATCAG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLQLVY*HYQHHQ
Trigger: CTGATGATGCTGATAATGCCAGTAAACTAGCTGCAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTTGCAAATTGCTGCTaGAACCTGAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLANCC*NLNRIL
Trigger: AAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTTGATTGGAGAGATTaGGTTGATACTGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKFDWRD*VDTEEL
Trigger: CAATTCTTCAGTATCAACCCAATCTCTCCAATCAAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATACACATCTGCAAGATaGGAAATCATATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKYTSAR*EIILSL
Trigger: AAGACTCAATATGATTTCCCATCTTGCAGATGTGTA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTGGGATCTTGCTTCTaGCAAACTTACATCCATTGT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLGSCF*QTYIHC
Trigger: ACAATGGATGTAAGTTTGCCAGAAGCAAGATCCCAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATCATGTATGGATTGGTaGATCCAGAAGCAGAATAAG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSCMDW*IQKQNK
Trigger: CTTATTCTGCTTCTGGATCCACCAATCCATACATGA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGCTATTTCCAAACCTTaGCTGGTAAAGTGTATGGAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPAISKP*LVKCMD
Trigger: ATCCATACACTTTACCAGCCAAGGTTTGGAAATAGC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATACATGATGTACATTTaGTCTAATGGTACAACTGCT +
Preference number: 4 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKYMMYI*SNGTTA
Trigger: AGCAGTTGTACCATTAGACCAAATGTACATCATGTA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTTATAGTCCATGTTTaGATTGCTCAGATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFIVHV*IAQIGW
Trigger: CCACCCAATCTGAGCAATCCAAACATGGACTATAAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATACTATTCTAATTTTTaGGGGGTGCCACAAACCGTA +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKYYSNF*GVPQTV
Trigger: TACGGTTTGTGGCACCCCCCAAAAATTAGAATAGTA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CAA 72 bp TCACTCTCAGTTCAATATCCTATTGCCAAACTAGTGTaGAGGTATATGACAAGTAGGAACATCACTCAAACA +
Preference number: 4 (lower is better)
Translates to: SLSVQYPIAKLV*RYMTSRNITQT
Trigger: TGTTTGAGTGATGTTCCTACTTGTCATATACCTCAACACTAGTTTGGCAATAGGATATTGAACTGAGAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTCCATAATAACTTTTaGAAGAGTGCCACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFHNNF*KSATWC
Trigger: ACACCAAGTGGCACTCTTTCAAAAGTTATTATGGAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATCCATTGCATTGATATaGTGGATATTGGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSIALI*WILGIL
Trigger: CAGAATACCCAATATCCATCATATCAATGCAATGGA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR TCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAACCAACAAAAGGGGGTaGTATCATATATATCTGTTG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPTNKRG*YHIYLL
Trigger: CAACAGATATATATGATATCACCCCCTTTTGTTGGT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGACATTTGGTTGACTaGTTTCACCTGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPRHLVD*FHLDFF
Trigger: AAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATCAATGATGCTCTTTTaGTGCACATTATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSMMLF*CTLSQL
Trigger: AAGCTGTGATAATGTGCAGCAAAAGAGCATCATTGA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGTTTTGGCTCATTCATaGTCTTATGCTGGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPVLAHS*SYAGKR
Trigger: TCTTTTACCAGCATAAGAGCATGAATGAGCCAAAAC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTGCTCATCAGCAGATaGATGGCTAAAAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLLISR*MAKSKN
Trigger: ATTTTTGCTTTTAGCCATGCATCTGCTGATGAGCAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGTTTATTCATCTTATaGAGGCATCAGTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPCLFIL*RHQSAQ
Trigger: TTGAGCAGACTGATGCCTGCATAAGATGAATAAACA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTAACTGCATTTTCTTaGGCTACAGAACTCACAGAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLTAFS*ATELTD
Trigger: ATCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATTAACTGCATTTTCTTaGGCTACAGAACTCACAGAT +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKLTAFS*ATELTD
Trigger: ATCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATTTTCTGCACCGCAATaGAAACACAATCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKFSAPQ*KHNLDN
Trigger: ATTATCCAGATTGTGTTTCCATTGCGGTGCAGAAAA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTTTCTGCACCGCAATaGAAACACAATCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFSAPQ*KHNLDN
Trigger: ATTATCCAGATTGTGTTTCCATTGCGGTGCAGAAAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTCCAGTGTATTGTTTaGAGGTCATTTGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFQCIV*RSFDWR
Trigger: TCTCCAATCAAATGACCTCCAAACAATACACTGGAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAATGCACTTGATTTCATaGTCTGACTATAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKMHLIS*SDYKGN
Trigger: ATTCCCCTTATAGTCAGACCATGAAATCAAGTGCAT...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTAGATGTAAAACTCTaGCTATTTCCAAACCTTGGC +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLDVKL*LFPNLG
Trigger: GCCAAGGTTTGGAAATAGCCAGAGTTTTACATCTAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAAGAAACCTGTATTTTaGATGCACTTGATTTCATGG +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPKKPVF*MHLISW
Trigger: CCATGAAATCAAGTGCATGCAAAATACAGGTTTCTT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR GCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAACTGTACATCACTGTaGGTCAATCAAGATGAAAAA +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPNCTSL*VNQDEK
Trigger: TTTTTCATCTTGATTGACGCACAGTGATGTACAGTT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACATTTTGCAAACACTTaGAATACCCTCTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPHFANT*NTLYFL
Trigger: AAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTTTGATTGGAGAGATTaGGTTGATACTGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMFDWRD*VDTEEL
Trigger: CAATTCTTCAGTATCAACCCAATCTCTCCAATCAAA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CCA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATACACATCTGCAAGATaGGAAATCATATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPYTSAR*EIILSL
Trigger: AAGACTCAATATGATTTCCCATCTTGCAGATGTGTA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CCA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGATATTCATTTTATTGTaGTATGGAGCCAAACCCACA +
Preference number: 4 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVIFILL*YGAKPT
Trigger: TGTGGGTTTGGCTCCATACCACAATAAAATGAATAT...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CCA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGAACATTCATAATTCATaGGAGGGGGTCAATATATCA +
Preference number: 4 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVNIHNS*EGVNIS
Trigger: TGATATATTGACCCCCTCCCATGAATTATGAATGTT...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CAA 72 bp GAAATTCTGCTGTGGGTTAAATGCTATCAAACAGCATaGCATGCTACAGAGAAATCTTTTGTGAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: EILLWVKCYQTA*HATEKSFVNGK
Trigger: TTTTCCATTCACAAAAGATTTCTCTGTAGCATGCAATGCTGTTTGATAGCATTTAACCCACAGCAGAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CAA 72 bp CTCTTGTTACAGGCTAATGCAGTTGATGATTTTAAGTaGAAGCCCATACTCATTTACCATTCTGAAAATTCC +
Preference number: 4 (lower is better)
Translates to: LLLQANAVDDFK*KPILIYHSENS
Trigger: GGAATTTTCAGAATGGTAAATGAGTATGGGCTTCAACTTAAAATCATCAACTGCATTAGCCTGTAACAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
3UTR CAA 72 bp TGCGTCAATCAAGATGAAAAATTCATTCAAGTAAAGTaGACACCACTCAGAAGCATTTTCAAGTATGGCTAT +
Preference number: 4 (lower is better)
Translates to: CVNQDEKFIQVK*TPLRSIFKYGY
Trigger: ATAGCCATACTTGAAAATGCTTCTGAGTGGTGTCAACTTTACTTGAATGAATTTTTCATCTTGATTGACGCA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCACCTGTTCCATCAGGCTaGCTTCGGGGCCATCCACAA +
Preference number: 5 (lower is better)
Translates to: KARVGPLVGACASTLWLAPVPSG*LRGHPQ
Trigger: TTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGG...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCTGCCACCAGGAGCTaGCAAATTGCTGCTGGAACC +
Preference number: 5 (lower is better)
Translates to: KARVGPLVGACASTLWLAAATRS*QIAAGT
Trigger: GGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGGGGGCGGACGTGACTaGCATGCGAGCGGGACCCGG +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAGGGRD*HASGTR
Trigger: CCGGGTCCCGCTCGCATGCAAGTCACGTCCGCCCCC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS TCA 90 bp CTACGAAAGCAGCCTAGCCTCCGCATCAATATTCATAAGGCAGTTTaGCGTCTGTTCTCATCACTCAGCGGGGCCGGCGTCTCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: LRKQPSLRINIHKAV*RLFSSLSGAGVSGR
Trigger: CCGCCCCGAGACGCCGGCCCCGCTGAGTGATGAGAACAGACGTCAAACTGCCTTATGAATATTGATGCGGAGGCTAGGCTGCTTTCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265149.9
ENST00000513237.5
ENST00000540549.5
CDS GCA 90 bp AGACAGCGGGATTCCTTCCCACACCAGGATGAGAATCACAATCACTaGAGCCTCACAGGTGTGGCCAGCTCGCTCCCGCACCAAACACAG +
Preference number: 5 (lower is better)
Translates to: RQRDSFPHQDENHNH*SLTGVASSLPHQTQ
Trigger: CTGTGTTTGGTGCGGGAGCGAGCTGGCCACACCTGTGAGGCTGCAGTGATTGTGATTCTCATCCTGGTGTGGGAAGGAATCCCGCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCAGCAATCCAGCAGTaGCAGTCGGGTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: KARVGPLVGACASTLWLAAAIQQ*QSGLLS
Trigger: AGAAAGGAGACCCGACTGCAACTGCTGGATTGCTGC...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413648.2
CDS-3UTR CAA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCACTGGATCATGTCCTATaGGCTGCTGCTGAGCCCATC +
Preference number: 5 (lower is better)
Translates to: KARVGPLVGACASTLWLALDHVL*AAAEPI
Trigger: GATGGGCTCAGCAGCAGCCAATAGGACATGATCCAG...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGCTGCCACCAGGAGCTaGCAAATTGCTGCTGGAACC +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPAATRS*QIAAGT
Trigger: GGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTCAGATAGTGCTGTGTaGGGGGCACAAGATCTCGTG +
Preference number: 5 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVSDSAV*GAQDLV
Trigger: CACGAGATCTTGTGCCCCCAACACAGCACTATCTGA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCGAATTGACCCATGAGTaGGAGCCACGGCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPELTHE*EPRPLP
Trigger: GGGGAGTGGCCGTGGCTCCAACTCATGGGTCAATTC...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS TCA 90 bp AGAGTTTGTCAGCCAGAGACAGCGGGATTCCTTCCCACACCAGGATaGGAATCACAATCACTGCAGCCTCACAGGTGTGGCCAGCTCGCT +
Preference number: 5 (lower is better)
Translates to: RVCQPETAGFLPTPG*ESQSLQPHRCGQLA
Trigger: AGCGAGCTGGCCACACCTGTGAGGCTGCAGTGATTGTGATTCTCATCCTGGTGTGGGAAGGAATCCCGCTGTCTCTGGCTGACAAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS CCA 90 bp AGCATCATCAGCATCACAGGCCTCACTCACCACTGCAGCTGGCTTTaGAGGCAGCTCAGAGTTAGAGGTCTGTGCGGAATTGATCTGCCC +
Preference number: 5 (lower is better)
Translates to: SIISITGLTHHCSWL*RQLRVRGLCGIDLP
Trigger: GGGCAGATCAATTCCGCACAGACCTCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCCTGTGATGCTGATGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGAGGTCTGTGCGGAATaGATCTGCCCTGAGGTATGC +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPEVCAE*ICPEVC
Trigger: GCATACCTCAGGGCAGATCAATTCCGCACAGACCTC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS CCA 90 bp TGTCTCCACTGTCTTACCAGCAGCTCAGTCCCTTACTGCTCTTCCTaGATCATGTCCTATTGGCTGCTGCTGAGCCCATCTCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: CLHCLTSSSVPYCSS*IMSYWLLLSPSPAS
Trigger: GGAAGCAGGAGATGGGCTCAGCAGCAGCCAATAGGACATGATCCAGGAAGAGCAGTAAGGGACTGAGCTGCTGGTAAGACAGTGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505801.1
CDS-3UTR CAA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCAGAATCTCTTGCTCTTaGTTTCTCATCAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFRISCS*FLINCW
Trigger: CCAGCAGTTGATGAGAAACAAAGAGCAAGAGATTCT...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTCACAAGATCTCGTGTTaGCTCCTTGTCTCGACCCTT +
Preference number: 5 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAHKISC*LLVSTL
Trigger: AAGGGTCGAGACAAGGAGCAAACACGAGATCTTGTG...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTGTGCTCCAGCTGTGTaGTTTTCTGGGTGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVCAPAV*FSGCKL
Trigger: AAGCTTACACCCAGAAAACAACACAGCTGGAGCACA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCGGTAAATGGTCTGTTTaGGAGAAGTGCACCTGGTGT +
Preference number: 5 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSGKWSV*EKCTWC
Trigger: ACACCAGGTGCACTTCTCCAAAACAGACCATTTACC...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCCTTTGCTGAGCAAGTaGCGCAGCTTGTTGACCAGA +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPPLLSK*RSLLTR
Trigger: TCTGGTCAACAAGCTGCGCAACTTGCTCAGCAAAGG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGATGTATCAAGTACCTTaGCTGAGCAAGTTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVMYQVP*LSKLRS
Trigger: GCTGCGCAACTTGCTCAGCAAAGGTACTTGATACAT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCTGCAGGTGGATTCTCTaGCTTAGTTACCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFCRWIL*LSYLFP
Trigger: TGGAAAAAGGTAACTAAGCAAGAGAATCCACCTGCA...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCTCAATGATGCTCTTTaGCTGCACATTATCACAGCT +
Preference number: 5 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFLNDAL*LHIITA
Trigger: AGCTGTGATAATGTGCAGCAAAAGAGCATCATTGAG...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAGCCTGGCTGGCCGATTCCAGCTGTTCTTTTGGTaGGTGTCTTTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: SRWSLCQYLVAGSLAGRFQLFFW*VSFLKK
Trigger: CTTCTTCAGAAAAGACACCAACCAAAAGAACAGCTG...GAATCGGCCAGCCAGGCTGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCCTTAGACAGAGGGTCTaGGCTTGGATACCTATACAG +
Preference number: 5 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSLRQRV*AWIPIQ
Trigger: CTGTATAGGTATCCAAGCCAAGACCCTCTGTCTAAG...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGTGTGCTGCTGAATGTTaGCCAGCCCTCAGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: HPSTQCGVSHCKRENMARCAAEC*PALRGP
Trigger: CGGGCCTCTGAGGGCTGGCAAACATTCAGCAGCACA...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGGAGTGGGACCTCTCGTaGGAGCCTGTGCCAGTACCT +
Preference number: 5 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLEWDLS*EPVPVP
Trigger: AGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTC...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGGGGCGGACGTGACTaGCATGCGAGCGGGACCCGG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGGGRD*HASGTR
Trigger: CCGGGTCCCGCTCGCATGCAAGTCACGTCCGCCCCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS CCA 90 bp TGCCCTCTAGTTGAATTCAGCAGCTCAGTCCCTTACTGCTCTTCCTaGATCATGTCCTATTGGCTGCTGCTGAGCCCATCTCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: CPLVEFSSSVPYCSS*IMSYWLLLSPSPAS
Trigger: GGAAGCAGGAGATGGGCTCAGCAGCAGCCAATAGGACATGATCCAGGAAGAGCAGTAAGGGACTGAGCTGCTGAATTCAACTAGAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000514870.1
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTCTCGTCCCTCAGCCTaGCAGCAATCCAGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSRPSA*QQSSSC
Trigger: GCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAGA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCTCAAATCGGAGACATTaGGTTGACTGCTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSSNRRH*VDCFHL
Trigger: CAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGA...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCACAAGATCTCGTGTTaGCTCCTTGTCTCGACCCTT +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPHKISC*LLVSTL
Trigger: AAGGGTCGAGACAAGGAGCAAACACGAGATCTTGTG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCTTCCTCCAGTCCCATTaGGACATTATGAGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSFLQSH*DIMSLE
Trigger: TTCGAGACTCATAATGTCCAAATGGGACTGGAGGAA...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAAGTTGCGCAGCTTGTaGACCAGACATATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVKLRSL*TRHILV
Trigger: AACCAAGATATGTCTGGTCAACAAGCTGCGCAACTT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTAGATATGGGGAGCAGTaGTCCACTGATAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMARYGEQ*STDRFP
Trigger: TGGAAACCTATCAGTGGACAACTGCTCCCCATATCT...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGACCAGACCTCATCGTaGTCCTCTGCACCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSDQTSS*SSAPEA
Trigger: GGCTTCTGGTGCAGAGGACAACGATGAGGTCTGGTC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGAATTGACCCATGAGTaGGAGCCACGGCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAELTHE*EPRPLP
Trigger: GGGGAGTGGCCGTGGCTCCAACTCATGGGTCAATTC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTAGTGAACTAGCTTTGTaGAGTCTGCAGCATGCAGCT +
Preference number: 5 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMASELAL*SLQHAA
Trigger: AGCTGCATGCTGCAGACTCAACAAAGCTAGTTCACT...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGCTGCAGAAGAGAAGTaGGAAGCTAGCAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPAAEEK*EASRSW
Trigger: CCAACTTCTGCTAGCTTCCAACTTCTCTTCTGCAGC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS TCA 90 bp CAGTCCCTTACTGCTCTTCCTGGATCATGTCCTATTGGCTGCTGCTaGGCCCATCTCCTGCTTCCAAGCGTTGTAACTCAACAGGAGCAA +
Preference number: 5 (lower is better)
Translates to: QSLTALPGSCPIGCC*AHLLLPSVVTQQEQ
Trigger: TTGCTCCTGTTGAGTTACAACGCTTGGAAGCAGGAGATGGGCTCAGCAGCAGCCAATAGGACATGATCCAGGAAGAGCAGTAAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000504042.5
ENST00000505801.1
ENST00000514870.1
CDS CCA 90 bp GGAGGTGATGGTATCAGGAATGGACTTAGTCTGTTGCCCTCAACATaGTTGGTTCTATCCTGTTCCATCAGGCTTGCTTCGGGGCCATCC +
Preference number: 5 (lower is better)
Translates to: GGDGIRNGLSLLPST*LVLSCSIRLASGPS
Trigger: GGATGGCCCCGAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGATACCATCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS CCA 90 bp CCACTTGGTGTCTCCATTTACTTCTGGATGAGCTCTCTCAGGCAGTaGGCTTCCATTCTGGAGCTTTGTAGCCAGAGGTTCTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: PLGVSIYFWMSSLRQ*ASILELCSQRFCLA
Trigger: TGCCAGACAGAACCTCTGGCTACAAAGCTCCAGAATGGAAGCCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGACACCAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTGTGCTGCTGAATGTTaGCCAGCCTCGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSCAAEC*PASFSS
Trigger: GGACGAGAACGAGGCTGGCAAACATTCAGCAGCACA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTGGATCATGTCCTATaGGCTGCTGCTGAGCCCATC +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLDHVL*AAAEPI
Trigger: GATGGGCTCAGCAGCAGCCAATAGGACATGATCCAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGTTGAAAGAGTGCCACTaGGTGTCTCCATTTACTTCT +
Preference number: 5 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVLKECH*VSPFTS
Trigger: AGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAA...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGCTGCCACCAGGAGCTaGCAAATTGCTGCTGGAACC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAAATRS*QIAAGT
Trigger: GGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCAAGTGTTGTGTTACTTaGGTTGGGGTAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCKCCVT*VGVVVV
Trigger: CACCACCACTACCCCAACCAAAGTAACACAACACTT...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGGTAAATGGTCTGTTTaGGAGAAGTGCACCTGGTGT +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPGKWSV*EKCTWC
Trigger: ACACCAGGTGCACTTCTCCAAAACAGACCATTTACC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCACCTTTTTCCATGTTTaGTTTTCTGGTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSTFFHV*FSGGAV
Trigger: CACAGCACCACCAGAAAACAAAACATGGAAAAAGGT...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCTGCAGGTGGATTCTCTaGCTTAGTTACCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSCRWIL*LSYLFP
Trigger: TGGAAAAAGGTAACTAAGCAAGAGAATCCACCTGCA...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAAGGCACACCGGCGATaGGTGAGCGTGCCGTATTTC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAKAHRR*VSVPYF
Trigger: GAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCGATTCTTTAAAGGGGTaGTGGCATGCAGCTCACGCT +
Preference number: 5 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPDSLKG*WHAAHA
Trigger: AGCGTGAGCTGCATGCCACAACCCCTTTAAAGAATC...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCGTCTGCTCAATCCTCTaGTTAAAGAGGACACTTAAG +
Preference number: 5 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSVCSIL*LKRTLK
Trigger: CTTAAGTGTCCTCTTTAACAAGAGGATTGAGCAGAC...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTGGCCAACAGCCACTaGCCAAACTCCTGCCTTACA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLANSH*PNSCLT
Trigger: TGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS TCA 90 bp TGGAGGCAGCTCAGAGTTAGAGGTCTGTGCGGAATTGATCTGCCCTaGGGTATGCGATGGGTGAGTGATCTCACAGGACAACTCATTAGT +
Preference number: 5 (lower is better)
Translates to: WRQLRVRGLCGIDLP*GMRWVSDLTGQLIS
Trigger: ACTAATGAGTTGTCCTGTGAGATCACTCACCCATCGCATACCTCAGGGCAGATCAATTCCGCACAGACCTCTAACTCTGAGCTGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS TCA 90 bp GCATGTGGCTTGCATCCAGGTTCCACCTTAATTGGCCTGTGCATCTaGCTATGGCAAGACTCAGTTTGGGGTTGCTGTGTTTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: ACGLHPGSTLIGLCI*LWQDSVWGCCVCCC
Trigger: ACAGCAGCAAACACAGCAACCCCAAACTGAGTCTTGCCATAGTCAGATGCACAGGCCAATTAAGGTGGAACCTGGATGCAAGCCACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 90 bp ATTATCAGCATCATCAGCATCACAGGCCTCACTCACCACTGCAGCTaGCTTTGGAGGCAGCTCAGAGTTAGAGGTCTGTGCGGAATTGAT +
Preference number: 5 (lower is better)
Translates to: IISIISITGLTHHCS*LWRQLRVRGLCGID
Trigger: ATCAATTCCGCACAGACCTCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCCTGTGATGCTGATGATGCTGATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTGTGCTGCTGAATGTTaGCCAGCCTCGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPACAAEC*PASFSS
Trigger: GGACGAGAACGAGGCTGGCAAACATTCAGCAGCACA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGAGGTCTGTGCGGAATaGATCTGCCCTGAGGTATGC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAEVCAE*ICPEVC
Trigger: GCATACCTCAGGGCAGATCAATTCCGCACAGACCTC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAACAGGTATTTAGCATaGCAGCTAGTTTACTGGCAT +
Preference number: 5 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVNRYLA*QLVYWH
Trigger: ATGCCAGTAAACTAGCTGCAATGCTAAATACCTGTT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCAAGTGTTGTGTTACTTaGGTTGGGGTAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPKCCVT*VGVVVV
Trigger: CACCACCACTACCCCAACCAAAGTAACACAACACTT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTTGGTACATTTGTGACTaGTGCTCCAGCTGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPWYICD*CSSCVV
Trigger: AACAACACAGCTGGAGCACAAGTCACAAATGTACCA...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTCAGCTGTTCTTTTGGTaGGTGTCTTTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAQLFFW*VSFLKK
Trigger: CTTCTTCAGAAAAGACACCAACCAAAAGAACAGCTG...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCAGATGGGAAATCATATaGAGTCTTGACAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSRWEII*SLDRCI
Trigger: GATACACCTGTCAAGACTCAATATGATTTCCCATCT...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGAGATGGGAAATCATATaGAGTCTTGACAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVRWEII*SLDRCI
Trigger: GATACACCTGTCAAGACTCAATATGATTTCCCATCT...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCACAGAGGGTCTTGGCTaGGATACCTATACAGATCCA +
Preference number: 5 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPTEGLG*DTYTDP
Trigger: TGGATCTGTATAGGTATCCAAGCCAAGACCCTCTGT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGAATTGACCCATGAGTaGGAGCCACGGCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFELTHE*EPRPLP
Trigger: GGGGAGTGGCCGTGGCTCCAACTCATGGGTCAATTC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCTGGCCAACAGCCACTaGCCAAACTCCTGCCTTACA +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPALANSH*PNSCLT
Trigger: TGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCTGGCAACCAGTCTTTCTGCTTaGACACTTTATTATCAGGTG +
Preference number: 5 (lower is better)
Translates to: KARVGPLVGACASTLWLATSLSA*TLYYQV
Trigger: CACCTGATAATAAAGTGTCAAAGCAGAAAGACTGGT...TGCCAGCCACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS GCA 90 bp TTGAATTCTCGTTCTCGTCCCTCAGCCTTGCAGCAATCCAGCAGTTaGAGTCGGGTCTCCTTTCTAACAAATCCTAAAGGGCAGCCATCT +
Preference number: 5 (lower is better)
Translates to: LNSRSRPSALQQSSS*SRVSFLTNPKGQPS
Trigger: AGATGGCTGCCCTTTAGGATTTGTTAGAAAGGAGACCCGACTGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAGAACGAGAATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413648.2
CDS CCA 90 bp GTGATGGTATCAGGAATGGACTTAGTCTGTTGCCCTCAACATGGTTaGTTCTATCCTGTTCCATCAGGCTTGCTTCGGGGCCATCCACAA +
Preference number: 5 (lower is better)
Translates to: VMVSGMDLVCCPQHG*FYPVPSGLLRGHPQ
Trigger: TTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGATACCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTCTCGTGTTTGCTCCTaGTCTCGACCCTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSRVCS*SRPFRI
Trigger: GATTCTGAAGGGTCGAGACAAGGAGCAAACACGAGA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTGGTCCACTGTACCTaGGGACTGCCCTTGATTCAT +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLVHCT*GLPLIH
Trigger: ATGAATCAAGGGCAGTCCCAAGGTACAGTGGACCAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTGGAACTGGAGATGTaGGTCCACTGTACCTTGGGA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLELEM*VHCTLG
Trigger: TCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTGGAATCTGCTCTTTGTaGAAAATGAAATCTAGTGCC +
Preference number: 5 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAGICSL*KMKSSA
Trigger: GGCACTAGATTTCATTTTCAACAAAGAGCAGATTCC...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp AAGGCACACCGGCGATTGGTGAGCGTGCCGTATTTCCTCAGCGTCTCGGTAAGCGAAGAAGATCTTGCTTaGGGATCACATTATTTGGAA +
Preference number: 5 (lower is better)
Translates to: KAHRRLVSVPYFLSVSVSEEDLA*GSHYLE
Trigger: TTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTC...GCTTACCGAGACGCTGAGGAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCAAGTTGCGCAGCTTGTaGACCAGACATATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPKLRSL*TRHILV
Trigger: AACCAAGATATGTCTGGTCAACAAGCTGCGCAACTT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGCACAGGAAAAACATTaGCATGGTTATGTATCAAGT +
Preference number: 5 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVAQEKH*HGYVSS
Trigger: ACTTGATACATAACCATGCAAATGTTTTTCCTGTGC...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGACTCAGTTTGGGGTaGCTGTGTTTGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSRLSLG*LCLLLF
Trigger: GAACAGCAGCAAACACAGCAACCCCAAACTGAGTCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTATACAGGCATGTGGCTaGCATCCAGGTTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSIQACG*HPGSTL
Trigger: TAAGGTGGAACCTGGATGCAAGCCACATGCCTGTAT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCTCAATGATGCTCTTTaGCTGCACATTATCACAGCT +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPLNDAL*LHIITA
Trigger: AGCTGTGATAATGTGCAGCAAAAGAGCATCATTGAG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGTTTCTCTTCCTCTTTaGGGTCATCCCCAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSVSLPL*GHPQAA
Trigger: AGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAAC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGATTCTTTAAAGGGGTaGTGGCATGCAGCTCACGCT +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSDSLKG*WHAAHA
Trigger: AGCGTGAGCTGCATGCCACAACCCCTTTAAAGAATC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AGGTGGGAAAGCCAGAGTGGGACCTCTCGTTGGAGCCTGTGCCAGTACCTTGTGGTAATATTCATTTTATaGTGGTATGGAGCCAAACCC +
Preference number: 5 (lower is better)
Translates to: RWESQSGTSRWSLCQYLVVIFIL*WYGAKP
Trigger: GGGTTTGGCTCCATACCACAATAAAATGAATATTAC...CACAAGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTCTGGCTTTCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGCAGCAATCCAGCAGTaGCAGTCGGGTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPAAIQQ*QSGLLS
Trigger: AGAAAGGAGACCCGACTGCAACTGCTGGATTGCTGC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTGGATCATGTCCTATaGGCTGCTGCTGAGCCCATC +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLDHVL*AAAEPI
Trigger: GATGGGCTCAGCAGCAGCCAATAGGACATGATCCAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCCTGTTCCATCAGGCTaGCTTCGGGGCCATCCACAA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAPVPSG*LRGHPQ
Trigger: TTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGACCTGGATTTCTTTCTaGGCTTACCCCGAAGTTACG +
Preference number: 5 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLTWISF*AYPEVT
Trigger: CGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGT...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGAGGTCTGTGCGGAATaGATCTGCCCTGAGGTATGC +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFEVCAE*ICPEVC
Trigger: GCATACCTCAGGGCAGATCAATTCCGCACAGACCTC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCAACAGGTATTTAGCATaGCAGCTAGTTTACTGGCAT +
Preference number: 5 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCNRYLA*QLVYWH
Trigger: ATGCCAGTAAACTAGCTGCAATGCTAAATACCTGTT...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTTCAGATAGTGCTGTGTaGGGGGCACAAGATCTCGTG +
Preference number: 5 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLSDSAV*GAQDLV
Trigger: CACGAGATCTTGTGCCCCCAACACAGCACTATCTGA...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTGGTCCACTGTACCTaGGGACTGCCCTTGATTCAT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPALVHCT*GLPLIH
Trigger: ATGAATCAAGGGCAGTCCCAAGGTACAGTGGACCAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTGGAACTGGAGATGTaGGTCCACTGTACCTTGGGA +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPALELEM*VHCTLG
Trigger: TCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCACTGCACATGAGCTTTaGGTAAATGGTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPTAHEL*VNGLFW
Trigger: CCAAAACAGACCATTTACCAAAAGCTCATGTGCAGT...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTCATAAGTTTTTCAGTTaGGGAATCTGCTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAHKFFS*GICSLL
Trigger: CAACAAAGAGCAGATTCCCAAACTGAAAAACTTATG...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGCTGATCATTGTTGCTTaGGGGGTGAGGAAAAGTCTG +
Preference number: 5 (lower is better)
Translates to: HPSTQCGVSHCKRENMARLIIVA*GVRKSL
Trigger: CAGACTTTTCCTCACCCCCAAAGCAACAATGATCAG...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp CCTCATCGTTGTCCTCTGCACCAGAAGCCACACCCTGGACTAGTGCCAATGGCTGAGTCTCGAACTCGCTaGATTTTGAATACTGATTTT +
Preference number: 5 (lower is better)
Translates to: PHRCPLHQKPHPGLVPMAESRTR*ILNTDF
Trigger: AAAATCAGTATTCAAAATCAAGCGAGTTCGAGACTC...AGCCATTGGCACTAGTCCAGGGTGTGGCTTCTGGTGCAGAGGACAACGATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCCATGTGATGCAAGTTTaGGGTCTTGTTTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPHVMQV*GLVSCK
Trigger: TTTGCAGGAAACAAGACCCAAAACTTGCATCACATG...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGTGCCCTGTGAAGAAGATCTaGCTTTGGGATCACATTATT +
Preference number: 5 (lower is better)
Translates to: FLFMPGFSGIHRKVGSLCPVKKI*LWDHII
Trigger: AATAATGTGATCCCAAAGCAAGATCTTCTTCACAGG...GCACAGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGCAAGTTGCGCAGCTaGTTGACCAGACATATCTTG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSKLRS*LTRHIL
Trigger: CAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTATGTATCAAGTACCTTaGCTGAGCAAGTTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSMYQVP*LSKLRS
Trigger: GCTGCGCAACTTGCTCAGCAAAGGTACTTGATACAT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGACTCAGTTTGGGGTaGCTGTGTTTGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPARLSLG*LCLLLF
Trigger: GAACAGCAGCAAACACAGCAACCCCAAACTGAGTCT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAAGGCACACCGGCGATaGGTGAGCGTGCCGTATTTC +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAKAHRR*VSVPYF
Trigger: GAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCTTTGTCGGCAAGTCTaGACTGGCTCTGCTAACATC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPALCRQV*TGSANI
Trigger: GATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAAG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCGTCTCATGTATGGATaGGTGGATCCAGAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSRLMYG*VDPEAE
Trigger: TTCTGCTTCTGGATCCACCAATCCATACATGAGACG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACAGAGGGTCTTGGCTaGGATACCTATACAGATCCA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTEGLG*DTYTDP
Trigger: TGGATCTGTATAGGTATCCAAGCCAAGACCCTCTGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTTAGACAGAGGGTCTaGGCTTGGATACCTATACAG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLRQRV*AWIPIQ
Trigger: CTGTATAGGTATCCAAGCCAAGACCCTCTGTCTAAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGCATGTCATTCTCCTaGTTTTGGAGATGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSMSFS*FWRCRA
Trigger: TGCCCTGCATCTCCAAAACAAGGAGAATGACATGCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTACTGACAGGTTGGTaGTGGTCTTTTCAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLLTGW*WSFQVR
Trigger: CCTCACTTGAAAAGACCACAACCAACCTGTCAGTAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCTTCCCCACCTTCTTTTaGCATAGAATGCTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPFPTFF*HRMLWS
Trigger: AGACCAAAGCATTCTATGCAAAAAGAAGGTGGGGAA...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS GCA 90 bp TCTGGCAAATGGGAGGTGATGGTATCAGGAATGGACTTAGTCTGTTaGCCTCAACATGGTTGGTTCTATCCTGTTCCATCAGGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: SGKWEVMVSGMDLVC*PQHGWFYPVPSGLL
Trigger: AAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGATACCATCACCTCCCATTTGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS GCA 90 bp GTTTTAAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTaGTGGAACCTGAACAGAATTCTTCACCAGACGCTAGCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: VLNTVQSCHQELANC*WNLNRILHQTLALW
Trigger: CCACAAAGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 90 bp TTAAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTaGAACCTGAACAGAATTCTTCACCAGACGCTAGCTTTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LNTVQSCHQELANCC*NLNRILHQTLALWF
Trigger: GAACCACAAAGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGCAGCAATCCAGCAGTaGCAGTCGGGTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAAAIQQ*QSGLLS
Trigger: AGAAAGGAGACCCGACTGCAACTGCTGGATTGCTGC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGTGCTGCTGAATGTTaGCCAGCCTCGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEACAAEC*PASFSS
Trigger: GGACGAGAACGAGGCTGGCAAACATTCAGCAGCACA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTGGATCATGTCCTATaGGCTGCTGCTGAGCCCATC +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALDHVL*AAAEPI
Trigger: GATGGGCTCAGCAGCAGCCAATAGGACATGATCCAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACCTGTTCCATCAGGCTaGCTTCGGGGCCATCCACAA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKPVPSG*LRGHPQ
Trigger: TTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTCCTGTTCCATCAGGCTaGCTTCGGGGCCATCCACAA +
Preference number: 5 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSPVPSG*LRGHPQ
Trigger: TTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGG...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGTCAAATCGGAGACATTaGGTTGACTGCTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLSNRRH*VDCFHL
Trigger: CAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGA...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTCAAATCGGAGACATTaGGTTGACTGCTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSSNRRH*VDCFHL
Trigger: CAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGAGGTCTGTGCGGAATaGATCTGCCCTGAGGTATGC +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAEVCAE*ICPEVC
Trigger: GCATACCTCAGGGCAGATCAATTCCGCACAGACCTC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGCTGCCACCAGGAGCTaGCAAATTGCTGCTGGAACC +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKAATRS*QIAAGT
Trigger: GGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACAATGGAACAGTCATaGTCCCTGCAGTCTGTATGT +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTMEQS*SLQSVC
Trigger: ACATACAGACTGCAGGGACAATGACTGTTCCATTGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATCAACTGCTGGCAGTaGTCCTGTAGCTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPINCWQ*SCSSPL
Trigger: CAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTATCAACTGCTGGCAGTaGTCCTGTAGCTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFINCWQ*SCSSPL
Trigger: CAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGAT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATCAGATAGTGCTGTGTaGGGGGCACAAGATCTCGTG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSDSAV*GAQDLV
Trigger: CACGAGATCTTGTGCCCCCAACACAGCACTATCTGA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGGTAAATGGTCTGTTTaGGAGAAGTGCACCTGGTGT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAGKWSV*EKCTWC
Trigger: ACACCAGGTGCACTTCTCCAAAACAGACCATTTACC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTGAGTCTCGAACTCGCTaGATTTTGAATACTGATTTT +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPESRTR*ILNTDF
Trigger: AAAATCAGTATTCAAAATCAAGCGAGTTCGAGACTC...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp CCGATTCCTGTTCATGCCTGGGTTTTCTGGCATCCATCGCAAAGTGGGCAGCCTCAAGAAACCTGTATTTaGCATGCACTTGATTTCATG +
Preference number: 5 (lower is better)
Translates to: PIPVHAWVFWHPSQSGQPQETCI*HALDFM
Trigger: CATGAAATCAAGTGCATGCAAAATACAGGTTTCTTG...AGGCTGCCCACTTTGCGATGGATGCCAGAAAACCCAGGCATGAACAGGAATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTAGACTCAGTTTGGGGTaGCTGTGTTTGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVRLSLG*LCLLLF
Trigger: GAACAGCAGCAAACACAGCAACCCCAAACTGAGTCT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCCTCCAAATTCTCGATaGTCTTCTCTAGTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSPPNSR*SSLVRV
Trigger: CACTCTCACTAGAGAAGACAATCGAGAATTTGGAGG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGATATGGGGAGCAGTaGTCCACTGATAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPARYGEQ*STDRFP
Trigger: TGGAAACCTATCAGTGGACAACTGCTCCCCATATCT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGGCTATTTCCAAACCTaGGCTGGTAAAGTGTATGGA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSGYFQT*AGKVYG
Trigger: TCCATACACTTTACCAGCCAAGGTTTGGAAATAGCC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTTGGATTGCTCAGATaGGGTGGTAATCTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSFGLLR*GGNLEV
Trigger: CACCTCTAGATTACCACCCAATCTGAGCAATCCAAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GGCTCCCATGAAGTGGCCATCCATCTCATGAGTGGGATAAGGAGGCAATTTCCCTTAGCATCACTTAATTaGTGTAAGCCTCCTTGGACA +
Preference number: 5 (lower is better)
Translates to: GSHEVAIHLMSGIRRQFPLASLN*CKPPWT
Trigger: TGTCCAAGGAGGCTTACACAAATTAAGTGATGCTAA...GGGAAATTGCCTCCTTATCCCACTCATGAGATGGATGGCCACTTCATGGGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGAGCCAAGCCATGTTTaGGCTCATTCATGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSEPSHV*AHSCSY
Trigger: ATAAGAGCATGAATGAGCCAAAACATGGCTTGGCTC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACGAGTGGGACCTCTCGTaGGAGCCTGTGCCAGTACCT +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNEWDLS*EPVPVP
Trigger: AGGTACTGGCACAGGCTCCAACGAGAGGTCCCACTC...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS CCA 90 bp TGCTGCTGGAACCTGAACAGAATTCTTCACCAGACGCTAGCTTTGTaGTTCCCTGGATGTTATTTTCTGCAGGAGATGGGCATATCTCAA +
Preference number: 5 (lower is better)
Translates to: CCWNLNRILHQTLAL*FPGCYFLQEMGISQ
Trigger: TTGAGATATGCCCATCTCCTGCAGAAAATAACATCCAGGGAACCACAAAGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 90 bp GGACACAGATTTGTCCATAAATTCTCTTACATACATTCCCCAGGCTaGAAGGCTCAGCCCAGCGCTGACTTATGTACCTTGAGAAAAGTG +
Preference number: 5 (lower is better)
Translates to: GHRFVHKFSYIHSPG*KAQPSADLCTLRKV
Trigger: CACTTTTCTCAAGGTACATAAGTCAGCGCTGGGCTGAGCCTTCCAGCCTGGGGAATGTATGTAAGAGAATTTATGGACAAATCTGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514870.1
CDS-3UTR CAA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGAACCTGGATTTCTTTCTaGGCTTACCCCGAAGTTACG +
Preference number: 5 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGTWISF*AYPEVT
Trigger: CGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGT...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCATCGGAGACATTTGGTaGACTGCTTTCACCTGGATT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAIGDIW*TAFTWI
Trigger: AATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGAT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGAGGTCTGTGCGGAATaGATCTGCCCTGAGGTATGC +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKEVCAE*ICPEVC
Trigger: GCATACCTCAGGGCAGATCAATTCCGCACAGACCTC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCATTGGTGGGTTATGCTaGAGGTGTTCTGACATTGGT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAIGGLC*RCSDIG
Trigger: ACCAATGTCAGAACACCTCAAGCATAACCCACCAAT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCATCAACTGCTGGCAGTaGTCCTGTAGCTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAINCWQ*SCSSPL
Trigger: CAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGAT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACATCAACTGCTGGCAGTaGTCCTGTAGCTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYINCWQ*SCSSPL
Trigger: CAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGAT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAGAATCTCTTGCTCTTaGTTTCTCATCAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSRISCS*FLINCW
Trigger: CCAGCAGTTGATGAGAAACAAAGAGCAAGAGATTCT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTCTCGTGTTTGCTCCTaGTCTCGACCCTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFSRVCS*SRPFRI
Trigger: GATTCTGAAGGGTCGAGACAAGGAGCAAACACGAGA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATCTCGTGTTTGCTCCTaGTCTCGACCCTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSRVCS*SRPFRI
Trigger: GATTCTGAAGGGTCGAGACAAGGAGCAAACACGAGA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCACAAGATCTCGTGTTaGCTCCTTGTCTCGACCCTT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFHKISC*LLVSTL
Trigger: AAGGGTCGAGACAAGGAGCAAACACGAGATCTTGTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTTGTGCTCCAGCTGTGTaGTTTTCTGGGTGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVCAPAV*FSGCKL
Trigger: AAGCTTACACCCAGAAAACAACACAGCTGGAGCACA...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCACCTTGGGACTGCCCTaGATTCATTTCAACTTGGTA +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPATLGLP*IHFNLV
Trigger: TACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGGTCCACTGTACCTaGGGACTGCCCTTGATTCAT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLVHCT*GLPLIH
Trigger: ATGAATCAAGGGCAGTCCCAAGGTACAGTGGACCAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTGGGATGGTTGTGTTaGTGCTGCCTGTTTATGAGG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLGWLC*CCLFMR
Trigger: CCTCATAAACAGGCAGCACAAACACAACCATCCCAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTGGGATGGTTGTGTTaGTGCTGCCTGTTTATGAGG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLGWLC*CCLFMR
Trigger: CCTCATAAACAGGCAGCACAAACACAACCATCCCAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTCCTCCAGTCCCATTaGGACATTATGAGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAFLQSH*DIMSLE
Trigger: TTCGAGACTCATAATGTCCAAATGGGACTGGAGGAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CATCCTTCTACACAGTGTGGGGTATCTCATTGCAAGAGGGAAAACATGGCACGGCATGTGATGCAAGTTTaGGGTCTTGTTTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: HPSTQCGVSHCKRENMARHVMQV*GLVSCK
Trigger: TTTGCAGGAAACAAGACCCAAAACTTGCATCACATG...CCGTGCCATGTTTTCCCTCTTGCAATGAGATACCCCACACTGTGTAGAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAAGTTGCGCAGCTTGTaGACCAGACATATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAKLRSL*TRHILV
Trigger: AACCAAGATATGTCTGGTCAACAAGCTGCGCAACTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCCTTTGCTGAGCAAGTaGCGCAGCTTGTTGACCAGA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAPLLSK*RSLLTR
Trigger: TCTGGTCAACAAGCTGCGCAACTTGCTCAGCAAAGG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAGACTCAGTTTGGGGTaGCTGTGTTTGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFRLSLG*LCLLLF
Trigger: GAACAGCAGCAAACACAGCAACCCCAAACTGAGTCT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATACAGGCATGTGGCTaGCATCCAGGTTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPIQACG*HPGSTL
Trigger: TAAGGTGGAACCTGGATGCAAGCCACATGCCTGTAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTGCAGGTGGATTCTCTaGCTTAGTTACCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSCRWIL*LSYLFP
Trigger: TGGAAAAAGGTAACTAAGCAAGAGAATCCACCTGCA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTACTTGCTTCTGTGATTaGAGAGTAAGAGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSTCFCD*RVRALW
Trigger: CCATAAGGCTCTTACTCTCAAATCACAGAAGCAAGT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGTTTCTCTTCCTCTTTaGGGTCATCCCCAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFVSLPL*GHPQAA
Trigger: AGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAAC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTTTGTCGGCAAGTCTaGACTGGCTCTGCTAACATC +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLCRQV*TGSANI
Trigger: GATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGATTCTTTAAAGGGGTaGTGGCATGCAGCTCACGCT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPDSLKG*WHAAHA
Trigger: AGCGTGAGCTGCATGCCACAACCCCTTTAAAGAATC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTCAGTGAACTAGCTTaGTTGAGTCTGCAGCATGCA +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAFSELA*LSLQHA
Trigger: TGCATGCTGCAGACTCAACAAAGCTAGTTCACTGAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGTCTGCTCAATCCTCTaGTTAAAGAGGACACTTAAG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSVCSIL*LKRTLK
Trigger: CTTAAGTGTCCTCTTTAACAAGAGGATTGAGCAGAC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACTGGCCAACAGCCACTaGCCAAACTCCTGCCTTACA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLANSH*PNSCLT
Trigger: TGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCTATACTTCCTGTTCTaGTTGGCCAGCAGTTTAACA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSLYFLF*LASSLT
Trigger: TGTTAAACTGCTGGCCAACAAGAACAGGAAGTATAG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS TCA 90 bp TGTACCTTGGGACTGCCCTTGATTCATTTCAACTTGGTACATTTGTaGCTTGTGCTCCAGCTGTGTTGTTTTCTGGGTGTAAGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: CTLGLPLIHFNLVHL*LVLQLCCFLGVSLP
Trigger: AGGCAAGCTTACACCCAGAAAACAACACAGCTGGAGCACAAGTCACAAATGTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS TCA 90 bp TTTTGGAACTGGAGATGTTGGTCCACTGTACCTTGGGACTGCCCTTaGTTCATTTCAACTTGGTACATTTGTGACTTGTGCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: FWNWRCWSTVPWDCP*FISTWYICDLCSSC
Trigger: ACAGCTGGAGCACAAGTCACAAATGTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 90 bp TTGTCTCGACCCTTCAGAATCTCTTGCTCTTTGTTTCTCATCAACTaGTGGCAGTTGTCCTGTAGCTCTCCACTGCTACCAAAAATTGGT +
Preference number: 5 (lower is better)
Translates to: LSRPFRISCSLFLIN*WQLSCSSPLLPKIG
Trigger: ACCAATTTTTGGTAGCAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAACAAAGAGCAAGAGATTCTGAAGGGTCGAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACCTGTTCCATCAGGCTaGCTTCGGGGCCATCCACAA +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPPVPSG*LRGHPQ
Trigger: TTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTGAAAGAGTGCCACTaGGTGTCTCCATTTACTTCT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPALKECH*VSPFTS
Trigger: AGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCATACCCTCTACTTTCTaGTGTAAAGTCAGGACTCAC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAIPSTF*CKVRTH
Trigger: GTGAGTCCTGACTTTACACAAGAAAGTAGAGGGTAT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTTAACTGCATTTTCTaGGGCTACAGAACTCACAGA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSFNCIF*GYRTHR
Trigger: TCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTAACAGGTATTTAGCATaGCAGCTAGTTTACTGGCAT +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSNRYLA*QLVYWH
Trigger: ATGCCAGTAAACTAGCTGCAATGCTAAATACCTGTT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGCTGCCACCAGGAGCTaGCAAATTGCTGCTGGAACC +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPAATRS*QIAAGT
Trigger: GGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAAGTGTTGTGTTACTTaGGTTGGGGTAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPKCCVT*VGVVVV
Trigger: CACCACCACTACCCCAACCAAAGTAACACAACACTT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTACAATGGAACAGTCATaGTCCCTGCAGTCTGTATGT +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVTMEQS*SLQSVC
Trigger: ACATACAGACTGCAGGGACAATGACTGTTCCATTGT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAATCAACTGCTGGCAGTaGTCCTGTAGCTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKINCWQ*SCSSPL
Trigger: CAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGAT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCACAAGATCTCGTGTTaGCTCCTTGTCTCGACCCTT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAHKISC*LLVSTL
Trigger: AAGGGTCGAGACAAGGAGCAAACACGAGATCTTGTG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATCAGATAGTGCTGTGTaGGGGGCACAAGATCTCGTG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKSDSAV*GAQDLV
Trigger: CACGAGATCTTGTGCCCCCAACACAGCACTATCTGA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGTGCTCCAGCTGTGTaGTTTTCTGGGTGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFCAPAV*FSGCKL
Trigger: AAGCTTACACCCAGAAAACAACACAGCTGGAGCACA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTACCTTGGGACTGCCCTaGATTCATTTCAACTTGGTA +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVTLGLP*IHFNLV
Trigger: TACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTGGAACTGGAGATGTaGGTCCACTGTACCTTGGGA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALELEM*VHCTLG
Trigger: TCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGTAAATGGTCTGTTTaGGAGAAGTGCACCTGGTGT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGKWSV*EKCTWC
Trigger: ACACCAGGTGCACTTCTCCAAAACAGACCATTTACC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCACTGCACATGAGCTTTaGGTAAATGGTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPATAHEL*VNGLFW
Trigger: CCAAAACAGACCATTTACCAAAAGCTCATGTGCAGT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGGAATCTGCTCTTTGTaGAAAATGAAATCTAGTGCC +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSGICSL*KMKSSA
Trigger: GGCACTAGATTTCATTTTCAACAAAGAGCAGATTCC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTGGGATGGTTGTGTTaGTGCTGCCTGTTTATGAGG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALGWLC*CCLFMR
Trigger: CCTCATAAACAGGCAGCACAAACACAACCATCCCAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTGATCATTGTTGCTTaGGGGGTGAGGAAAAGTCTG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLIIVA*GVRKSL
Trigger: CAGACTTTTCCTCACCCCCAAAGCAACAATGATCAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTGATCATTGTTGCTTaGGGGGTGAGGAAAAGTCTG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLIIVA*GVRKSL
Trigger: CAGACTTTTCCTCACCCCCAAAGCAACAATGATCAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTGCAAGTTTTGGGTCTaGTTTCCTGCAAAAAGTTCA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSCKFWV*FPAKSS
Trigger: TGAACTTTTTGCAGGAAACAAGACCCAAAACTTGCA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTTCTGCTCCTGTTCTaGAAAGCACCTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLLLLF*KAPVKK
Trigger: CTTCTTCACAGGTGCTTTCAAGAACAGGAGCAGAAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTTCTGCTCCTGTTCTaGAAAGCACCTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLLLLF*KAPVKK
Trigger: CTTCTTCACAGGTGCTTTCAAGAACAGGAGCAGAAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGCAAGTTGCGCAGCTaGTTGACCAGACATATCTTG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSKLRS*LTRHIL
Trigger: CAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATCCTTTGCTGAGCAAGTaGCGCAGCTTGTTGACCAGA +
Preference number: 5 (lower is better)
Translates to: KETLGALRVSALSFPPTHPLLSK*RSLLTR
Trigger: TCTGGTCAACAAGCTGCGCAACTTGCTCAGCAAAGG...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTATGTATCAAGTACCTTaGCTGAGCAAGTTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFMYQVP*LSKLRS
Trigger: GCTGCGCAACTTGCTCAGCAAAGGTACTTGATACAT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACAGACTCAGTTTGGGGTaGCTGTGTTTGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYRLSLG*LCLLLF
Trigger: GAACAGCAGCAAACACAGCAACCCCAAACTGAGTCT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCATACAGGCATGTGGCTaGCATCCAGGTTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAIQACG*HPGSTL
Trigger: TAAGGTGGAACCTGGATGCAAGCCACATGCCTGTAT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAGCTGTTCTTTTGGTaGGTGTCTTTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQLFFW*VSFLKK
Trigger: CTTCTTCAGAAAAGACACCAACCAAAAGAACAGCTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAAGGCACACCGGCGATaGGTGAGCGTGCCGTATTTC +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPKAHRR*VSVPYF
Trigger: GAAATACGGCACGCTCACCAATCGCCGGTGTGCCTT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGTTTCTCTTCCTCTTTaGGGTCATCCCCAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAVSLPL*GHPQAA
Trigger: AGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAAC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAAGAGTGGACAGGTTTaGCAAATGAGACTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAKSGQV*QMRLQF
Trigger: AAACTGGAGTCTCATTTGCAAAACCTGTCCACTCTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTCCTCCAAATTCTCGATaGTCTTCTCTAGTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLPPNSR*SSLVRV
Trigger: CACTCTCACTAGAGAAGACAATCGAGAATTTGGAGG...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTTTGTCGGCAAGTCTaGACTGGCTCTGCTAACATC +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALCRQV*TGSANI
Trigger: GATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTTCAGCTGCAGCTTTCTaGGCTTCTAGTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLSAAAF*ASSFLC
Trigger: ACAAAGGAAACTAGAAGCCAAGAAAGCTGCAGCTGA...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGACGTTTTCAGTTTGTTTaGTACGTGATGGGGCTGACT +
Preference number: 5 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGRFQFV*YVMGLT
Trigger: AGTCAGCCCCATCACGTACAAAACAAACTGAAAACG...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGATATGGGGAGCAGTaGTCCACTGATAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRYGEQ*STDRFP
Trigger: TGGAAACCTATCAGTGGACAACTGCTCCCCATATCT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTGGCTATTTCCAAACCTaGGCTGGTAAAGTGTATGGA +
Preference number: 5 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLGYFQT*AGKVYG
Trigger: TCCATACACTTTACCAGCCAAGGTTTGGAAATAGCC...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTTTTTATAGTCCATGTTaGGATTGCTCAGATTGGGTG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSFYSPC*DCSDWV
Trigger: CACCCAATCTGAGCAATCCAAACATGGACTATAAAA...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGTCATTCTCCTTGTTTaGGAGATGCAGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPVILLV*EMQGMK
Trigger: CTTCATGCCCTGCATCTCCAAAACAAGGAGAATGAC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAGCATGTCATTCTCCTaGTTTTGGAGATGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFSMSFS*FWRCRA
Trigger: TGCCCTGCATCTCCAAAACAAGGAGAATGACATGCT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGACCAGACCTCATCGTaGTCCTCTGCACCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPDQTSS*SSAPEA
Trigger: GGCTTCTGGTGCAGAGGACAACGATGAGGTCTGGTC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTGAGCCAAGCCATGTTTaGGCTCATTCATGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLEPSHV*AHSCSY
Trigger: ATAAGAGCATGAATGAGCCAAAACATGGCTTGGCTC...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACTACTGACAGGTTGGTaGTGGTCTTTTCAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLLTGW*WSFQVR
Trigger: CCTCACTTGAAAAGACCACAACCAACCTGTCAGTAG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTATTGCCAAACTAGTGTaGAGGTATATGACAAGTAGG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSIAKLV*RYMTSR
Trigger: CCTACTTGTCATATACCTCAACACTAGTTTGGCAAT...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCTATACTTCCTGTTCTaGTTGGCCAGCAGTTTAACA +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPALYFLF*LASSLT
Trigger: TGTTAAACTGCTGGCCAACAAGAACAGGAAGTATAG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGTGCTATCAAACAGCATaGCATGCTACAGAGAAATCT +
Preference number: 5 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLCYQTA*HATEKS
Trigger: AGATTTCTCTGTAGCATGCAATGCTGTTTGATAGCA...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGCTATCAACCAGCCGTTaGGGCTCTCTCCCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVLSTSR*GSLPLP
Trigger: AGGGAGAGGGAGAGAGCCCAAACGGCTGGTTGATAG...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGCAGCAATCCAGCAGTaGCAGTCGGGTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPAAIQQ*QSGLLS
Trigger: AGAAAGGAGACCCGACTGCAACTGCTGGATTGCTGC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGTGCTGCTGAATGTTaGCCAGCCTCGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPCAAEC*PASFSS
Trigger: GGACGAGAACGAGGCTGGCAAACATTCAGCAGCACA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTGGATCATGTCCTATaGGCTGCTGCTGAGCCCATC +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLDHVL*AAAEPI
Trigger: GATGGGCTCAGCAGCAGCCAATAGGACATGATCCAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTATACCCTCTACTTTCTaGTGTAAAGTCAGGACTCAC +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVIPSTF*CKVRTH
Trigger: GTGAGTCCTGACTTTACACAAGAAAGTAGAGGGTAT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATCGGAGACATTTGGTaGACTGCTTTCACCTGGATT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPIGDIW*TAFTWI
Trigger: AATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTTAACTGCATTTTCTaGGGCTACAGAACTCACAGA +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAFNCIF*GYRTHR
Trigger: TCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAAA...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAGAGGTCTGTGCGGAATaGATCTGCCCTGAGGTATGC +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKEVCAE*ICPEVC
Trigger: GCATACCTCAGGGCAGATCAATTCCGCACAGACCTC...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAACAGGTATTTAGCATaGCAGCTAGTTTACTGGCAT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPANRYLA*QLVYWH
Trigger: ATGCCAGTAAACTAGCTGCAATGCTAAATACCTGTT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAAGTGTTGTGTTACTTaGGTTGGGGTAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAKCCVT*VGVVVV
Trigger: CACCACCACTACCCCAACCAAAGTAACACAACACTT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAACAATGGAACAGTCATaGTCCCTGCAGTCTGTATGT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPTMEQS*SLQSVC
Trigger: ACATACAGACTGCAGGGACAATGACTGTTCCATTGT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCTCTCGTGTTTGCTCCTaGTCTCGACCCTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSSRVCS*SRPFRI
Trigger: GATTCTGAAGGGTCGAGACAAGGAGCAAACACGAGA...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAATCTCGTGTTTGCTCCTaGTCTCGACCCTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKSRVCS*SRPFRI
Trigger: GATTCTGAAGGGTCGAGACAAGGAGCAAACACGAGA...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTTCAGATAGTGCTGTGTaGGGGGCACAAGATCTCGTG +
Preference number: 5 (lower is better)
Translates to: DKAAAQFERTESNFQRNSSDSAV*GAQDLV
Trigger: CACGAGATCTTGTGCCCCCAACACAGCACTATCTGA...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTGTGCTCCAGCTGTGTaGTTTTCTGGGTGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLCAPAV*FSGCKL
Trigger: AAGCTTACACCCAGAAAACAACACAGCTGGAGCACA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTGTGCTCCAGCTGTGTaGTTTTCTGGGTGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEACAPAV*FSGCKL
Trigger: AAGCTTACACCCAGAAAACAACACAGCTGGAGCACA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATGGTACATTTGTGACTaGTGCTCCAGCTGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPWYICD*CSSCVV
Trigger: AACAACACAGCTGGAGCACAAGTCACAAATGTACCA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGGTACATTTGTGACTaGTGCTCCAGCTGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFWYICD*CSSCVV
Trigger: AACAACACAGCTGGAGCACAAGTCACAAATGTACCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAACCTTGGGACTGCCCTaGATTCATTTCAACTTGGTA +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPTLGLP*IHFNLV
Trigger: TACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCATAAGTTTTTCAGTTaGGGAATCTGCTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSHKFFS*GICSLL
Trigger: CAACAAAGAGCAGATTCCCAAACTGAAAAACTTATG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGAGTCTCGAACTCGCTaGATTTTGAATACTGATTTT +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSESRTR*ILNTDF
Trigger: AAAATCAGTATTCAAAATCAAGCGAGTTCGAGACTC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTCACCCAAGAGCTCCGATGGAGATGCACAAGATTAATGCTGTTTTCGTGCCTGCAAGAAACCTGTATTTaGCATGCACTTGATTTCATG +
Preference number: 5 (lower is better)
Translates to: VTQELRWRCTRLMLFSCLQETCI*HALDFM
Trigger: CATGAAATCAAGTGCATGCAAAATACAGGTTTCTTG...CAGGCACGAAAACAGCATTAATCTTGTGCATCTCCATCGGAGCTCTTGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTGAAGAAGATCTTGCTTaGGGATCACATTATTTGGAA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSEEDLA*GSHYLE
Trigger: TTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTC...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACCTTCTGCTCCTGTTCTaGAAAGCACCTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYLLLLF*KAPVKK
Trigger: CTTCTTCACAGGTGCTTTCAAGAACAGGAGCAGAAG...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGAGCAAGTTGCGCAGCTaGTTGACCAGACATATCTTG +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLSKLRS*LTRHIL
Trigger: CAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAATACAGGCATGTGGCTaGCATCCAGGTTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKIQACG*HPGSTL
Trigger: TAAGGTGGAACCTGGATGCAAGCCACATGCCTGTAT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GACTCCAGTTTCTCTTCCTCTTTTGGGTCATCCCCAAGCAGCTTAAACTTCCTTACTTGCTTCTGTGATTaGAGAGTAAGAGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: DSSFSSSFGSSPSSLNFLTCFCD*RVRALW
Trigger: CCATAAGGCTCTTACTCTCAAATCACAGAAGCAAGT...AAGGAAGTTTAAGCTGCTTGGGGATGACCCAAAAGAGGAAGAGAAACTGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCAGATGGGAAATCATATaGAGTCTTGACAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPARWEII*SLDRCI
Trigger: GATACACCTGTCAAGACTCAATATGATTTCCCATCT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCCTCCAAATTCTCGATaGTCTTCTCTAGTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFPPNSR*SSLVRV
Trigger: CACTCTCACTAGAGAAGACAATCGAGAATTTGGAGG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACTTTGTCGGCAAGTCTaGACTGGCTCTGCTAACATC +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLCRQV*TGSANI
Trigger: GATGTTAGCAGAGCCAGTCAAGACTTGCCGACAAAG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATCAGCTGCAGCTTTCTaGGCTTCTAGTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPSAAAF*ASSFLC
Trigger: ACAAAGGAAACTAGAAGCCAAGAAAGCTGCAGCTGA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTCAGCTGCAGCTTTCTaGGCTTCTAGTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFSAAAF*ASSFLC
Trigger: ACAAAGGAAACTAGAAGCCAAGAAAGCTGCAGCTGA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACGTTTTCAGTTTGTTTaGTACGTGATGGGGCTGACT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRFQFV*YVMGLT
Trigger: AGTCAGCCCCATCACGTACAAAACAAACTGAAAACG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCGTCTCATGTATGGATaGGTGGATCCAGAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEARLMYG*VDPEAE
Trigger: TTCTGCTTCTGGATCCACCAATCCATACATGAGACG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGATATGGGGAGCAGTaGTCCACTGATAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEARYGEQ*STDRFP
Trigger: TGGAAACCTATCAGTGGACAACTGCTCCCCATATCT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTTAGACAGAGGGTCTaGGCTTGGATACCTATACAG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALRQRV*AWIPIQ
Trigger: CTGTATAGGTATCCAAGCCAAGACCCTCTGTCTAAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTGGATTGCTCAGATaGGGTGGTAATCTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFGLLR*GGNLEV
Trigger: CACCTCTAGATTACCACCCAATCTGAGCAATCCAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGTCATTCTCCTTGTTTaGGAGATGCAGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAVILLV*EMQGMK
Trigger: CTTCATGCCCTGCATCTCCAAAACAAGGAGAATGAC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTCCCCACTGCCCACGTCATGAGAACTATACTACTGACAGGTTGGTTGTGGTCTCAGTACTTGTTTGATTaGTGTTCCATGACTATGCAA +
Preference number: 5 (lower is better)
Translates to: FPTAHVMRTILLTGWLWSQYLFD*CSMTMQ
Trigger: TTGCATAGTCATGGAACACAAATCAAACAAGTACTG...AGACCACAACCAACCTGTCAGTAGTATAGTTCTCATGACGTGGGCAGTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCTCAGTACCTTAGCATaGTTCAAGTTGTCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPALSTLA*FKLSKL
Trigger: AAGCTTTGACAACTTGAACAATGCTAAGGTACTGAG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCACCAGAAAACATGTTTaGTGGACTAACGTATTCCCT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPATRKHV*WTNVFP
Trigger: AGGGAATACGTTAGTCCACAAAACATGTTTTCTGGT...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGTGAACTAGCTTTGTaGAGTCTGCAGCATGCAGCT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASELAL*SLQHAA
Trigger: AGCTGCATGCTGCAGACTCAACAAAGCTAGTTCACT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTCAGTGAACTAGCTTaGTTGAGTCTGCAGCATGCA +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPFSELA*LSLQHA
Trigger: TGCATGCTGCAGACTCAACAAAGCTAGTTCACTGAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCGACAAACTGGGAAATaGACCGAGTTCTGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLRQTGK*TEFCFS
Trigger: GGAGAAACAGAACTCGGTCAATTTCCCAGTTTGTCG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCATCCAGAGCAAGGCCTaGACTCCCTTCAGTTCTATG +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSIQSKA*TPFSSM
Trigger: CATAGAACTGAAGGGAGTCAAGGCCTTGCTCTGGAT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAACCCACCCCCAGAATATaGCTTGGTTTATTGTCAAGG +
Preference number: 5 (lower is better)
Translates to: WIRAKYIESLLERYHHLEPTPRI*LGLLSR
Trigger: CCTTGACAATAAACCAAGCAATATTCTGGGGGTGGG...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS TCA 90 bp TGTCCTGTAGCTCTCCACTGCTACCAAAAATTGGTGGGTTATGCTTaGGGTGTTCTGACATTGGTCTTGTTTTCTCAGAACACAATGGAA +
Preference number: 5 (lower is better)
Translates to: CPVALHCYQKLVGYA*GVLTLVLFSQNTME
Trigger: TTCCATTGTGTTCTGAGAAAACAAGACCAATGTCAGAACACCTCAAGCATAACCCACCAATTTTTGGTAGCAGTGGAGAGCTACAGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 90 bp ATTTCATTTTGTTTTAAATACCGTTCAGAGCTGCCACCAGGAGCTTaGAAATTGCTGCTGGAACCTGAACAGAATTCTTCACCAGACGCT +
Preference number: 5 (lower is better)
Translates to: ISFCFKYRSELPPGA*KLLLEPEQNSSPDA
Trigger: AGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATTTAAAACAAAATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 90 bp CAGTTGTCCTGTAGCTCTCCACTGCTACCAAAAATTGGTGGGTTATaGTTGAGGTGTTCTGACATTGGTCTTGTTTTCTCAGAACACAAT +
Preference number: 5 (lower is better)
Translates to: QLSCSSPLLPKIGGL*LRCSDIGLVFSEHN
Trigger: ATTGTGTTCTGAGAAAACAAGACCAATGTCAGAACACCTCAAGCATAACCCACCAATTTTTGGTAGCAGTGGAGAGCTACAGGACAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 90 bp GAACCTGAACAGAATTCTTCACCAGACGCTAGCTTTGTGGTTCCCTaGATGTTATTTTCTGCAGGAGATGGGCATATCTCAAAAACTGAT +
Preference number: 5 (lower is better)
Translates to: EPEQNSSPDASFVVP*MLFSAGDGHISKTD
Trigger: ATCAGTTTTTGAGATATGCCCATCTCCTGCAGAAAATAACATCCAGGGAACCACAAAGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTGAAAGAGTGCCACTaGGTGTCTCCATTTACTTCT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLKECH*VSPFTS
Trigger: AGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTGAAAGAGTGCCACTaGGTGTCTCCATTTACTTCT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLKECH*VSPFTS
Trigger: AGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAATACCCTCTACTTTCTaGTGTAAAGTCAGGACTCAC +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPIPSTF*CKVRTH
Trigger: GTGAGTCCTGACTTTACACAAGAAAGTAGAGGGTAT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAACCTGGATTTCTTTCTaGGCTTACCCCGAAGTTACG +
Preference number: 5 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKTWISF*AYPEVT
Trigger: CGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAACCTGGATTTCTTTCTaGGCTTACCCCGAAGTTACG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKTWISF*AYPEVT
Trigger: CGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCATCGGAGACATTTGGTaGACTGCTTTCACCTGGATT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAIGDIW*TAFTWI
Trigger: AATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGAT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCATTGGTGGGTTATGCTaGAGGTGTTCTGACATTGGT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAIGGLC*RCSDIG
Trigger: ACCAATGTCAGAACACCTCAAGCATAACCCACCAAT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGATTGGTGGGTTATGCTaGAGGTGTTCTGACATTGGT +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLIGGLC*RCSDIG
Trigger: ACCAATGTCAGAACACCTCAAGCATAACCCACCAAT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAATCAACTGCTGGCAGTaGTCCTGTAGCTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKINCWQ*SCSSPL
Trigger: CAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGAT...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAGAATCTCTTGCTCTTaGTTTCTCATCAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFRISCS*FLINCW
Trigger: CCAGCAGTTGATGAGAAACAAAGAGCAAGAGATTCT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAGAATCTCTTGCTCTTaGTTTCTCATCAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRISCS*FLINCW
Trigger: CCAGCAGTTGATGAGAAACAAAGAGCAAGAGATTCT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATCAGATAGTGCTGTGTaGGGGGCACAAGATCTCGTG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSDSAV*GAQDLV
Trigger: CACGAGATCTTGTGCCCCCAACACAGCACTATCTGA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATGTGCTCCAGCTGTGTaGTTTTCTGGGTGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKCAPAV*FSGCKL
Trigger: AAGCTTACACCCAGAAAACAACACAGCTGGAGCACA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGACCTTGGGACTGCCCTaGATTCATTTCAACTTGGTA +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLTLGLP*IHFNLV
Trigger: TACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCACCTTGGGACTGCCCTaGATTCATTTCAACTTGGTA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEATLGLP*IHFNLV
Trigger: TACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACTTGGAACTGGAGATGTaGGTCCACTGTACCTTGGGA +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNLELEM*VHCTLG
Trigger: TCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAA...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGTAAATGGTCTGTTTaGGAGAAGTGCACCTGGTGT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGKWSV*EKCTWC
Trigger: ACACCAGGTGCACTTCTCCAAAACAGACCATTTACC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTACTGCACATGAGCTTTaGGTAAATGGTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFTAHEL*VNGLFW
Trigger: CCAAAACAGACCATTTACCAAAAGCTCATGTGCAGT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTCTGGGATGGTTGTGTTaGTGCTGCCTGTTTATGAGG +
Preference number: 5 (lower is better)
Translates to: DKAAAQFERTESNFQRNSLGWLC*CCLFMR
Trigger: CCTCATAAACAGGCAGCACAAACACAACCATCCCAG...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACTGATCATTGTTGCTTaGGGGGTGAGGAAAAGTCTG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLIIVA*GVRKSL
Trigger: CAGACTTTTCCTCACCCCCAAAGCAACAATGATCAG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCGAACTCGCTTGATTTaGAATACTGATTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPARTRLI*NTDFHH
Trigger: ATGGTGAAAATCAGTATTCAAAATCAAGCGAGTTCG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAATTCCTCCAGTCCCATTaGGACATTATGAGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: WIRAKYIESLLERYHHLEFLQSH*DIMSLE
Trigger: TTCGAGACTCATAATGTCCAAATGGGACTGGAGGAA...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTCCTCCAGTCCCATTaGGACATTATGAGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLFLQSH*DIMSLE
Trigger: TTCGAGACTCATAATGTCCAAATGGGACTGGAGGAA...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAAGAAACCTGTATTTaGCATGCACTTGATTTCATG +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQETCI*HALDFM
Trigger: CATGAAATCAAGTGCATGCAAAATACAGGTTTCTTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGAAACTAGGTGTGTATaGTTTGAACAAGAAACCTGT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAETRCV*FEQETC
Trigger: ACAGGTTTCTTGTTCAAACAATACACACCTAGTTTC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTTGCAAGTTTTGGGTCTaGTTTCCTGCAAAAAGTTCA +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVCKFWV*FPAKSS
Trigger: TGAACTTTTTGCAGGAAACAAGACCCAAAACTTGCA...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCATGTGATGCAAGTTTaGGGTCTTGTTTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFHVMQV*GLVSCK
Trigger: TTTGCAGGAAACAAGACCCAAAACTTGCATCACATG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACTTCTGCTCCTGTTCTaGAAAGCACCTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLLLLF*KAPVKK
Trigger: CTTCTTCACAGGTGCTTTCAAGAACAGGAGCAGAAG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAAGTTGCGCAGCTTGTaGACCAGACATATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAKLRSL*TRHILV
Trigger: AACCAAGATATGTCTGGTCAACAAGCTGCGCAACTT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAGCAAGTTGCGCAGCTaGTTGACCAGACATATCTTG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKSKLRS*LTRHIL
Trigger: CAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACCTTTGCTGAGCAAGTaGCGCAGCTTGTTGACCAGA +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPPLLSK*RSLLTR
Trigger: TCTGGTCAACAAGCTGCGCAACTTGCTCAGCAAAGG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCGCACAGGAAAAACATTaGCATGGTTATGTATCAAGT +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAAQEKH*HGYVSS
Trigger: ACTTGATACATAACCATGCAAATGTTTTTCCTGTGC...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTAGACTCAGTTTGGGGTaGCTGTGTTTGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: DKAAAQFERTESNFQRNSRLSLG*LCLLLF
Trigger: GAACAGCAGCAAACACAGCAACCCCAAACTGAGTCT...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACATACAGGCATGTGGCTaGCATCCAGGTTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNIQACG*HPGSTL
Trigger: TAAGGTGGAACCTGGATGCAAGCCACATGCCTGTAT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGCAGGTGGATTCTCTaGCTTAGTTACCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFCRWIL*LSYLFP
Trigger: TGGAAAAAGGTAACTAAGCAAGAGAATCCACCTGCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATGCAGGTGGATTCTCTaGCTTAGTTACCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPCRWIL*LSYLFP
Trigger: TGGAAAAAGGTAACTAAGCAAGAGAATCCACCTGCA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTCAATGATGCTCTTTaGCTGCACATTATCACAGCT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLNDAL*LHIITA
Trigger: AGCTGTGATAATGTGCAGCAAAAGAGCATCATTGAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AGAGTTTGGATAAGGACTAACTGGATTGGGCCGTCTCATGTATGGATTGGTGGATCTTTTCTGAAGAAGTaGTTTGCTGCTCTAAAGCTG +
Preference number: 5 (lower is better)
Translates to: RVWIRTNWIGPSHVWIGGSFLKK*FAALKL
Trigger: CAGCTTTAGAGCAGCAAACAACTTCTTCAGAAAAGA...TCCACCAATCCATACATGAGACGGCCCAATCCAGTTAGTCCTTATCCAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCAGCTGTTCTTTTGGTaGGTGTCTTTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFQLFFW*VSFLKK
Trigger: CTTCTTCAGAAAAGACACCAACCAAAAGAACAGCTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAAACTTCCTTGGGATCTaGCTTCTGGCAAACTTACAT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPNFLGI*LLANLH
Trigger: ATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGTT...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAACTTCCTTGGGATCTaGCTTCTGGCAAACTTACAT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFNFLGI*LLANLH
Trigger: ATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGTT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCCTCCAAATTCTCGATaGTCTTCTCTAGTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAPPNSR*SSLVRV
Trigger: CACTCTCACTAGAGAAGACAATCGAGAATTTGGAGG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTCAGCTGCAGCTTTCTaGGCTTCTAGTTTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEASAAAF*ASSFLC
Trigger: ACAAAGGAAACTAGAAGCCAAGAAAGCTGCAGCTGA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACGTCTCATGTATGGATaGGTGGATCCAGAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKRLMYG*VDPEAE
Trigger: TTCTGCTTCTGGATCCACCAATCCATACATGAGACG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAACAGAGGGTCTTGGCTaGGATACCTATACAGATCCA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKTEGLG*DTYTDP
Trigger: TGGATCTGTATAGGTATCCAAGCCAAGACCCTCTGT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTGGATTGCTCAGATaGGGTGGTAATCTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAFGLLR*GGNLEV
Trigger: CACCTCTAGATTACCACCCAATCTGAGCAATCCAAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGTCATTCTCCTTGTTTaGGAGATGCAGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKVILLV*EMQGMK
Trigger: CTTCATGCCCTGCATCTCCAAAACAAGGAGAATGAC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACTACTGACAGGTTGGTaGTGGTCTTTTCAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLLTGW*WSFQVR
Trigger: CCTCACTTGAAAAGACCACAACCAACCTGTCAGTAG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTCCCCACCTTCTTTTaGCATAGAATGCTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFPTFF*HRMLWS
Trigger: AGACCAAAGCATTCTATGCAAAAAGAAGGTGGGGAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTCCCCACCTTCTTTTaGCATAGAATGCTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPFPTFF*HRMLWS
Trigger: AGACCAAAGCATTCTATGCAAAAAGAAGGTGGGGAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCAGTACTTGTTTGATTaGTGTTCCATGACTATGCAA +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAQYLFD*CSMTMQ
Trigger: TTGCATAGTCATGGAACACAAATCAAACAAGTACTG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTACCAGAAAACATGTTTaGTGGACTAACGTATTCCCT +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVTRKHV*WTNVFP
Trigger: AGGGAATACGTTAGTCCACAAAACATGTTTTCTGGT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTCAGTGAACTAGCTTaGTTGAGTCTGCAGCATGCA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAFSELA*LSLQHA
Trigger: TGCATGCTGCAGACTCAACAAAGCTAGTTCACTGAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGTCTGCTCAATCCTCTaGTTAAAGAGGACACTTAAG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPVCSIL*LKRTLK
Trigger: CTTAAGTGTCCTCTTTAACAAGAGGATTGAGCAGAC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTATTGCCAAACTAGTGTaGAGGTATATGACAAGTAGG +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVIAKLV*RYMTSR
Trigger: CCTACTTGTCATATACCTCAACACTAGTTTGGCAAT...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp TTTAGAGAGTTACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCCATTTTTGGAAATGTTaGCAAATTGGACACAACCAC +
Preference number: 5 (lower is better)
Translates to: FRELQVSLWPTATCQTPAHFWKC*QIGHNH
Trigger: GTGGTTGTGTCCAATTTGCAAACATTTCCAAAAATG...GGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGTAACTCTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTTACTTCCTGTTCTTGTaGGCCAGCAGTTTAACAAAT +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVYFLFL*ASSLTN
Trigger: ATTTGTTAAACTGCTGGCCAACAAGAACAGGAAGTA...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCTATACTTCCTGTTCTaGTTGGCCAGCAGTTTAACA +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFLYFLF*LASSLT
Trigger: TGTTAAACTGCTGGCCAACAAGAACAGGAAGTATAG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTAAGCAGCAGCACAGTTaGAGAGGACTGAGTCCAATT +
Preference number: 5 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSKQQHS*RGLSPI
Trigger: AATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTT...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAATCCGGGCAAAGTACATaGAAAGCCTTCTGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKSGQST*KAFWKG
Trigger: ACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGA...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACGTGTGGGGTATCTCATaGCAAGAGGGAAAACATGGC +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNVWGIS*QEGKHG
Trigger: GCCATGTTTTCCCTCTTGCAATGAGATACCCCACAC...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS TCA 90 bp GACTATTCTGGCTTCCCTTCATACAGGGTATTCCATAATAACTTTTaGAAGAGTGCCACTTGGTGTCTCCATTTACTTCTGGATGAGCTC +
Preference number: 5 (lower is better)
Translates to: DYSGFPSYRVFHNNF*KSATWCLHLLLDEL
Trigger: GAGCTCATCCAGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAAAAGTTATTATGGAATACCCTGTATGAAGGGAAGCCAGAATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS TCA 90 bp CTCTCCACTGCTACCAAAAATTGGTGGGTTATGCTTGAGGTGTTCTaGCATTGGTCTTGTTTTCTCAGAACACAATGGAACAGTCATTGT +
Preference number: 5 (lower is better)
Translates to: LSTATKNWWVMLEVF*HWSCFLRTQWNSHC
Trigger: ACAATGACTGTTCCATTGTGTTCTGAGAAAACAAGACCAATGTCAGAACACCTCAAGCATAACCCACCAATTTTTGGTAGCAGTGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 90 bp TCACAGATTCTTTCTTATCACTCAAATCGGAGACATTTGGTTGACTaGTTTCACCTGGATTTCTTTCTTGGCTTACCCCGAAGTTACGTC +
Preference number: 5 (lower is better)
Translates to: SQILSYHSNRRHLVD*FHLDFFLGLPRSYV
Trigger: GACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGAGTGATAAGAAAGAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTGAAAGAGTGCCACTaGGTGTCTCCATTTACTTCT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALKECH*VSPFTS
Trigger: AGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACATACCCTCTACTTTCTaGTGTAAAGTCAGGACTCAC +
Preference number: 5 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYIPSTF*CKVRTH
Trigger: GTGAGTCCTGACTTTACACAAGAAAGTAGAGGGTAT...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCATACCCTCTACTTTCTaGTGTAAAGTCAGGACTCAC +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAIPSTF*CKVRTH
Trigger: GTGAGTCCTGACTTTACACAAGAAAGTAGAGGGTAT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATCAAATCGGAGACATTaGGTTGACTGCTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKSNRRH*VDCFHL
Trigger: CAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCTCAAATCGGAGACATTaGGTTGACTGCTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSSNRRH*VDCFHL
Trigger: CAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGA...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTTAACTGCATTTTCTaGGGCTACAGAACTCACAGA +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFNCIF*GYRTHR
Trigger: TCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTAACAGGTATTTAGCATaGCAGCTAGTTTACTGGCAT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFNRYLA*QLVYWH
Trigger: ATGCCAGTAAACTAGCTGCAATGCTAAATACCTGTT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTAAGTGTTGTGTTACTTaGGTTGGGGTAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: DKAAAQFERTESNFQRNSKCCVT*VGVVVV
Trigger: CACCACCACTACCCCAACCAAAGTAACACAACACTT...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAACAATGGAACAGTCATaGTCCCTGCAGTCTGTATGT +
Preference number: 5 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKTMEQS*SLQSVC
Trigger: ACATACAGACTGCAGGGACAATGACTGTTCCATTGT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAACAATGGAACAGTCATaGTCCCTGCAGTCTGTATGT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKTMEQS*SLQSVC
Trigger: ACATACAGACTGCAGGGACAATGACTGTTCCATTGT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAATTGGTGGGTTATGCTaGAGGTGTTCTGACATTGGT +
Preference number: 5 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKIGGLC*RCSDIG
Trigger: ACCAATGTCAGAACACCTCAAGCATAACCCACCAAT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATCTCGTGTTTGCTCCTaGTCTCGACCCTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSRVCS*SRPFRI
Trigger: GATTCTGAAGGGTCGAGACAAGGAGCAAACACGAGA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGCACAAGATCTCGTGTTaGCTCCTTGTCTCGACCCTT +
Preference number: 5 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVHKISC*LLVSTL
Trigger: AAGGGTCGAGACAAGGAGCAAACACGAGATCTTGTG...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTTGGTCCACTGTACCTaGGGACTGCCCTTGATTCAT +
Preference number: 5 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMLVHCT*GLPLIH
Trigger: ATGAATCAAGGGCAGTCCCAAGGTACAGTGGACCAA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATTGGTCCACTGTACCTaGGGACTGCCCTTGATTCAT +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKLVHCT*GLPLIH
Trigger: ATGAATCAAGGGCAGTCCCAAGGTACAGTGGACCAA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGTTGGAACTGGAGATGTaGGTCCACTGTACCTTGGGA +
Preference number: 5 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVLELEM*VHCTLG
Trigger: TCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAA...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCACTGCACATGAGCTTTaGGTAAATGGTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEATAHEL*VNGLFW
Trigger: CCAAAACAGACCATTTACCAAAAGCTCATGTGCAGT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGAATCTGCTCTTTGTaGAAAATGAAATCTAGTGCC +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGICSL*KMKSSA
Trigger: GGCACTAGATTTCATTTTCAACAAAGAGCAGATTCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAACTGGGATGGTTGTGTTaGTGCTGCCTGTTTATGAGG +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKLGWLC*CCLFMR
Trigger: CCTCATAAACAGGCAGCACAAACACAACCATCCCAG...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TGGATTGGGCCGTCTCATGTATGGATTGGTGGATCCAGAAGCAGAATAAGAGTTGTATTTTGCATGCACTaGATTTCATGGTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: WIGPSHVWIGGSRSRIRVVFCMH*ISWSDY
Trigger: ATAGTCAGACCATGAAATCAAGTGCATGCAAAATAC...AACTCTTATTCTGCTTCTGGATCCACCAATCCATACATGAGACGGCCCAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265149.9
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTGCAAGTTTTGGGTCTaGTTTCCTGCAAAAAGTTCA +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFCKFWV*FPAKSS
Trigger: TGAACTTTTTGCAGGAAACAAGACCCAAAACTTGCA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCATGTGATGCAAGTTTaGGGTCTTGTTTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAHVMQV*GLVSCK
Trigger: TTTGCAGGAAACAAGACCCAAAACTTGCATCACATG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCCTGTGAAGAAGATCTaGCTTTGGGATCACATTATT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFPVKKI*LWDHII
Trigger: AATAATGTGATCCCAAAGCAAGATCTTCTTCACAGG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACCTGTGAAGAAGATCTaGCTTTGGGATCACATTATT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPPVKKI*LWDHII
Trigger: AATAATGTGATCCCAAAGCAAGATCTTCTTCACAGG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAATACAGGCATGTGGCTaGCATCCAGGTTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKIQACG*HPGSTL
Trigger: TAAGGTGGAACCTGGATGCAAGCCACATGCCTGTAT...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCACCTTTTTCCATGTTTaGTTTTCTGGTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEATFFHV*FSGGAV
Trigger: CACAGCACCACCAGAAAACAAAACATGGAAAAAGGT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTCAATGATGCTCTTTaGCTGCACATTATCACAGCT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALNDAL*LHIITA
Trigger: AGCTGTGATAATGTGCAGCAAAAGAGCATCATTGAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAACTTCCTTGGGATCTaGCTTCTGGCAAACTTACAT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEANFLGI*LLANLH
Trigger: ATGTAAGTTTGCCAGAAGCAAGATCCCAAGGAAGTT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAAGAGTGGACAGGTTTaGCAAATGAGACTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAKSGQV*QMRLQF
Trigger: AAACTGGAGTCTCATTTGCAAAACCTGTCCACTCTT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGCTATTTCCAAACCTaGGCTGGTAAAGTGTATGGA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGYFQT*AGKVYG
Trigger: TCCATACACTTTACCAGCCAAGGTTTGGAAATAGCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTTTATAGTCCATGTTaGGATTGCTCAGATTGGGTG +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPFYSPC*DCSDWV
Trigger: CACCCAATCTGAGCAATCCAAACATGGACTATAAAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTAGCATCACTTAATTaGTGTAAGCCTCCTTGGACA +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPLASLN*CKPPWT
Trigger: TGTCCAAGGAGGCTTACACAAATTAAGTGATGCTAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATATACTACTGACAGGTaGGTTGTGGTCTTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPYTTDR*VVVFSS
Trigger: ACTTGAAAAGACCACAACCAACCTGTCAGTAGTATA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTATTGCCAAACTAGTGTaGAGGTATATGACAAGTAGG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFIAKLV*RYMTSR
Trigger: CCTACTTGTCATATACCTCAACACTAGTTTGGCAAT...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS TCA 90 bp GAACTCACAGATTCTTTCTTATCACTCAAATCGGAGACATTTGGTTaGCTGCTTTCACCTGGATTTCTTTCTTGGCTTACCCCGAAGTTA +
Preference number: 5 (lower is better)
Translates to: ELTDSFLSLKSETFG*LLSPGFLSWLTPKL
Trigger: TAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGAGTGATAAGAAAGAATCTGTGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 90 bp AGTAAGCACCATTCATTTCATTTTGTTTTAAATACCGTTCAGAGCTaGCACCAGGAGCTTGCAAATTGCTGCTGGAACCTGAACAGAATT +
Preference number: 5 (lower is better)
Translates to: SKHHSFHFVLNTVQS*HQELANCCWNLNRI
Trigger: AATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATTTAAAACAAAATGAAATGAATGGTGCTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 90 bp TTTCTTATCACTCAAATCGGAGACATTTGGTTGACTGCTTTCACCTaGATTTCTTTCTTGGCTTACCCCGAAGTTACGTCTTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: FLITQIGDIWLTAFT*ISFLAYPEVTSFSI
Trigger: AATGGAGAAAGACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGAGTGATAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 90 bp TACAGAACTCACAGATTCTTTCTTATCACTCAAATCGGAGACATTTaGTTGACTGCTTTCACCTGGATTTCTTTCTTGGCTTACCCCGAA +
Preference number: 5 (lower is better)
Translates to: YRTHRFFLITQIGDI*LTAFTWISFLAYPE
Trigger: TTCGGGGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGAGTGATAAGAAAGAATCTGTGAGTTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATTTGAAAGAGTGCCACTaGGTGTCTCCATTTACTTCT +
Preference number: 5 (lower is better)
Translates to: KETLGALRVSALSFPPTHLKECH*VSPFTS
Trigger: AGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAA...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCATACCCTCTACTTTCTaGTGTAAAGTCAGGACTCAC +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSIPSTF*CKVRTH
Trigger: GTGAGTCCTGACTTTACACAAGAAAGTAGAGGGTAT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAACCTGGATTTCTTTCTaGGCTTACCCCGAAGTTACG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPTWISF*AYPEVT
Trigger: CGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAAGTGTTGTGTTACTTaGGTTGGGGTAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPKCCVT*VGVVVV
Trigger: CACCACCACTACCCCAACCAAAGTAACACAACACTT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACACAATGGAACAGTCATaGTCCCTGCAGTCTGTATGT +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNTMEQS*SLQSVC
Trigger: ACATACAGACTGCAGGGACAATGACTGTTCCATTGT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGGAATTTCCAGTGTATaGTTTGGAGGTCATTTGATT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPGISSV*FGGHLI
Trigger: AATCAAATGACCTCCAAACAATACACTGGAAATTCC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTACCTTGGGACTGCCCTaGATTCATTTCAACTTGGTA +
Preference number: 5 (lower is better)
Translates to: DKAAAQFERTESNFQRNSTLGLP*IHFNLV
Trigger: TACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGT...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGGGTAAATGGTCTGTTTaGGAGAAGTGCACCTGGTGT +
Preference number: 5 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVGKWSV*EKCTWC
Trigger: ACACCAGGTGCACTTCTCCAAAACAGACCATTTACC...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp GTTAGAACTGTTCCTCCAAGAATGTCTCACAATTTAGAAAAGGAGGCTGGCAAAACTGCACATGAGCTTTaGGTAAATGGTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: VRTVPPRMSHNLEKEAGKTAHEL*VNGLFW
Trigger: CCAAAACAGACCATTTACCAAAAGCTCATGTGCAGT...TTTGCCAGCCTCCTTTTCTAAATTGTGAGACATTCTTGGAGGAACAGTTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGGAATCTGCTCTTTGTaGAAAATGAAATCTAGTGCC +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLGICSL*KMKSSA
Trigger: GGCACTAGATTTCATTTTCAACAAAGAGCAGATTCC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCATAAGTTTTTCAGTTaGGGAATCTGCTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFHKFFS*GICSLL
Trigger: CAACAAAGAGCAGATTCCCAAACTGAAAAACTTATG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAACTGATCATTGTTGCTTaGGGGGTGAGGAAAAGTCTG +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKLIIVA*GVRKSL
Trigger: CAGACTTTTCCTCACCCCCAAAGCAACAATGATCAG...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTGATCATTGTTGCTTaGGGGGTGAGGAAAAGTCTG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLIIVA*GVRKSL
Trigger: CAGACTTTTCCTCACCCCCAAAGCAACAATGATCAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCACGAACTCGCTTGATTTaGAATACTGATTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPRTRLI*NTDFHH
Trigger: ATGGTGAAAATCAGTATTCAAAATCAAGCGAGTTCG...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGAGTCTCGAACTCGCTaGATTTTGAATACTGATTTT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPESRTR*ILNTDF
Trigger: AAAATCAGTATTCAAAATCAAGCGAGTTCGAGACTC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTGTATTTTGCATGCACTaGATTTCATGGTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFVFCMH*ISWSDY
Trigger: ATAGTCAGACCATGAAATCAAGTGCATGCAAAATAC...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGTATTTTGCATGCACTaGATTTCATGGTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPVFCMH*ISWSDY
Trigger: ATAGTCAGACCATGAAATCAAGTGCATGCAAAATAC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCAAGAAACCTGTATTTaGCATGCACTTGATTTCATG +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFQETCI*HALDFM
Trigger: CATGAAATCAAGTGCATGCAAAATACAGGTTTCTTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCAGAAACTAGGTGTGTATaGTTTGAACAAGAAACCTGT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPETRCV*FEQETC
Trigger: ACAGGTTTCTTGTTCAAACAATACACACCTAGTTTC...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACTGCAAGTTTTGGGTCTaGTTTCCTGCAAAAAGTTCA +
Preference number: 5 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYCKFWV*FPAKSS
Trigger: TGAACTTTTTGCAGGAAACAAGACCCAAAACTTGCA...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCATGTGATGCAAGTTTaGGGTCTTGTTTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSHVMQV*GLVSCK
Trigger: TTTGCAGGAAACAAGACCCAAAACTTGCATCACATG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACATGTGATGCAAGTTTaGGGTCTTGTTTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKHVMQV*GLVSCK
Trigger: TTTGCAGGAAACAAGACCCAAAACTTGCATCACATG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCCTGTGAAGAAGATCTaGCTTTGGGATCACATTATT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAPVKKI*LWDHII
Trigger: AATAATGTGATCCCAAAGCAAGATCTTCTTCACAGG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCTTCTGCTCCTGTTCTaGAAAGCACCTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMLLLLF*KAPVKK
Trigger: CTTCTTCACAGGTGCTTTCAAGAACAGGAGCAGAAG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACAAGTTGCGCAGCTTGTaGACCAGACATATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNKLRSL*TRHILV
Trigger: AACCAAGATATGTCTGGTCAACAAGCTGCGCAACTT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGCAAGTTGCGCAGCTaGTTGACCAGACATATCTTG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSKLRS*LTRHIL
Trigger: CAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGAGCAAGTTGCGCAGCTaGTTGACCAGACATATCTTG +
Preference number: 5 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVSKLRS*LTRHIL
Trigger: CAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCT...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCACCTTTTTCCATGTTTaGTTTTCTGGTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSTFFHV*FSGGAV
Trigger: CACAGCACCACCAGAAAACAAAACATGGAAAAAGGT...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACAGCTGTTCTTTTGGTaGGTGTCTTTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKQLFFW*VSFLKK
Trigger: CTTCTTCAGAAAAGACACCAACCAAAAGAACAGCTG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCAGATGGGAAATCATATaGAGTCTTGACAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEARWEII*SLDRCI
Trigger: GATACACCTGTCAAGACTCAATATGATTTCCCATCT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAAAGAGTGGACAGGTTTaGCAAATGAGACTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKKSGQV*QMRLQF
Trigger: AAACTGGAGTCTCATTTGCAAAACCTGTCCACTCTT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTTAGACAGAGGGTCTaGGCTTGGATACCTATACAG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLRQRV*AWIPIQ
Trigger: CTGTATAGGTATCCAAGCCAAGACCCTCTGTCTAAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTAGCATCACTTAATTaGTGTAAGCCTCCTTGGACA +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALASLN*CKPPWT
Trigger: TGTCCAAGGAGGCTTACACAAATTAAGTGATGCTAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTACTGACAGGTTGGTaGTGGTCTTTTCAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLLTGW*WSFQVR
Trigger: CCTCACTTGAAAAGACCACAACCAACCTGTCAGTAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTCCCCACCTTCTTTTaGCATAGAATGCTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKFPTFF*HRMLWS
Trigger: AGACCAAAGCATTCTATGCAAAAAGAAGGTGGGGAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTCAGTACTTGTTTGATTaGTGTTCCATGACTATGCAA +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFQYLFD*CSMTMQ
Trigger: TTGCATAGTCATGGAACACAAATCAAACAAGTACTG...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCTCAGTACCTTAGCATaGTTCAAGTTGTCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEALSTLA*FKLSKL
Trigger: AAGCTTTGACAACTTGAACAATGCTAAGGTACTGAG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAGTGAACTAGCTTTGTaGAGTCTGCAGCATGCAGCT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSELAL*SLQHAA
Trigger: AGCTGCATGCTGCAGACTCAACAAAGCTAGTTCACT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCATTGCCAAACTAGTGTaGAGGTATATGACAAGTAGG +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAIAKLV*RYMTSR
Trigger: CCTACTTGTCATATACCTCAACACTAGTTTGGCAAT...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TACAATCTGTTGCACACCATACCTGTAGGTGTTTGCCTGTTTAAGGGAAGTCCATTCATTCAAGTAAAGTaGACACCACTCAGAAGCATT +
Preference number: 5 (lower is better)
Translates to: YNLLHTIPVGVCLFKGSPFIQVK*TPLRSI
Trigger: AATGCTTCTGAGTGGTGTCAACTTTACTTGAATGAA...TGGACTTCCCTTAAACAGGCAAACACCTACAGGTATGGTGTGCAACAGATTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ACAAGTAAGTCTCTGGCCAACAGCCACTTGCCAAACTCCTGCCTTACAATTTTTTTCATTCAAGTAAAGTaGACACCACTCAGAAGCATT +
Preference number: 5 (lower is better)
Translates to: TSKSLANSHLPNSCLTIFFIQVK*TPLRSI
Trigger: AATGCTTCTGAGTGGTGTCAACTTTACTTGAATGAA...AAAAATTGTAAGGCAGGAGTTTGGCAAGTGGCTGTTGGCCAGAGACTTACTTGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGATGAGCCTTTACAAATaGCTGCCAGACTCAAGATTT +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLMSLYK*LPDSRF
Trigger: AAATCTTGAGTCTGGCAGCAATTTGTAAAGGCTCAT...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp AAGGAAACTTTAGGAGCACTAAGAGTGTCAGCATTATCATTTCCCCCAACTCATCTAAGTGTACCCTGCTaGTGTAGAGTAATGGAACAA +
Preference number: 5 (lower is better)
Translates to: KETLGALRVSALSFPPTHLSVPC*CRVMEQ
Trigger: TTGTTCCATTACTCTACACAAGCAGGGTACACTTAG...ATGAGTTGGGGGAAATGATAATGCTGACACTCTTAGTGCTCCTAAAGTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCCCCCAGAATATTGCTaGGTTTATTGTCAAGGATAC +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSPPEYC*VYCQGY
Trigger: GTATCCTTGACAATAAACCAAGCAATATTCTGGGGG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp TGGATCCGGGCAAAGTACATTGAAAGCCTTCTGGAAAGGTATCACCATTTAGAAACCAGTCTTTCTGCTTaGACACTTTATTATCAGGTG +
Preference number: 5 (lower is better)
Translates to: WIRAKYIESLLERYHHLETSLSA*TLYYQV
Trigger: CACCTGATAATAAAGTGTCAAAGCAGAAAGACTGGT...TTCTAAATGGTGATACCTTTCCAGAAGGCTTTCAATGTACTTTGCCCGGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS GCA 90 bp TGTCTAGTCAAAACTGTGACTGGCCCTGACATTTCAACTTTTACTTaGTTCTGTGATTTGAGAGTAAGAGCCTTATGGTCAAATAACGAC +
Preference number: 5 (lower is better)
Translates to: CLVKTVTGPDISTFT*FCDLRVRALWSNND
Trigger: GTCGTTATTTGACCATAAGGCTCTTACTCTCAAATCACAGAAGCAAGTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAATCGGAGACATTTGGTaGACTGCTTTCACCTGGATT +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKIGDIW*TAFTWI
Trigger: AATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGAT...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGATCGGAGACATTTGGTaGACTGCTTTCACCTGGATT +
Preference number: 5 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMIGDIW*TAFTWI
Trigger: AATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGAT...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATCAAATCGGAGACATTaGGTTGACTGCTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPSNRRH*VDCFHL
Trigger: CAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAATTGGTGGGTTATGCTaGAGGTGTTCTGACATTGGT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPIGGLC*RCSDIG
Trigger: ACCAATGTCAGAACACCTCAAGCATAACCCACCAAT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTGGTACATTTGTGACTaGTGCTCCAGCTGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMWYICD*CSSCVV
Trigger: AACAACACAGCTGGAGCACAAGTCACAAATGTACCA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGAATCTGCTCTTTGTaGAAAATGAAATCTAGTGCC +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGICSL*KMKSSA
Trigger: GGCACTAGATTTCATTTTCAACAAAGAGCAGATTCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCATAAGTTTTTCAGTTaGGGAATCTGCTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLHKFFS*GICSLL
Trigger: CAACAAAGAGCAGATTCCCAAACTGAAAAACTTATG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGCGAACTCGCTTGATTTaGAATACTGATTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLRTRLI*NTDFHH
Trigger: ATGGTGAAAATCAGTATTCAAAATCAAGCGAGTTCG...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGAGTCTCGAACTCGCTaGATTTTGAATACTGATTTT +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLESRTR*ILNTDF
Trigger: AAAATCAGTATTCAAAATCAAGCGAGTTCGAGACTC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTCCTCCAGTCCCATTaGGACATTATGAGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFLQSH*DIMSLE
Trigger: TTCGAGACTCATAATGTCCAAATGGGACTGGAGGAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACGTATTTTGCATGCACTaGATTTCATGGTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYVFCMH*ISWSDY
Trigger: ATAGTCAGACCATGAAATCAAGTGCATGCAAAATAC...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGAAACTAGGTGTGTATaGTTTGAACAAGAAACCTGT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAETRCV*FEQETC
Trigger: ACAGGTTTCTTGTTCAAACAATACACACCTAGTTTC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTCCTAGAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGGAAACTAGGTGTGTATaGTTTGAACAAGAAACCTGT +
Preference number: 5 (lower is better)
Translates to: VLEIDYIFPYDQSTTYCLETRCV*FEQETC
Trigger: ACAGGTTTCTTGTTCAAACAATACACACCTAGTTTC...CAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTCTAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp TGGAGCAAGAATGATACTGAATATGTCCTAGCTGCCCCAATGTATCCTAAGTACGAAACTAGGTGTGTATaGTTTGAACAAGAAACCTGT +
Preference number: 5 (lower is better)
Translates to: WSKNDTEYVLAAPMYPKYETRCV*FEQETC
Trigger: ACAGGTTTCTTGTTCAAACAATACACACCTAGTTTC...GTACTTAGGATACATTGGGGCAGCTAGGACATATTCAGTATCATTCTTGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCGCACAGGAAAAACATTaGCATGGTTATGTATCAAGT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAAQEKH*HGYVSS
Trigger: ACTTGATACATAACCATGCAAATGTTTTTCCTGTGC...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GATAAAGCAGCAGCACAGTTTGAGAGGACTGAGTCCAATTTTCAAAGAAATTCTTGCAGGTGGATTCTCTaGCTTAGTTACCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: DKAAAQFERTESNFQRNSCRWIL*LSYLFP
Trigger: TGGAAAAAGGTAACTAAGCAAGAGAATCCACCTGCA...AGAATTTCTTTGAAAATTGGACTCAGTCCTCTCAAACTGTGCTGCTGCTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACACTTGCTTCTGTGATTaGAGAGTAAGAGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNTCFCD*RVRALW
Trigger: CCATAAGGCTCTTACTCTCAAATCACAGAAGCAAGT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATCTTTTCTGAAGAAGTaGTTTGCTGCTCTAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKSFLKK*FAALKL
Trigger: CAGCTTTAGAGCAGCAAACAACTTCTTCAGAAAAGA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGGCTATTTCCAAACCTaGGCTGGTAAAGTGTATGGA +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPGYFQT*AGKVYG
Trigger: TCCATACACTTTACCAGCCAAGGTTTGGAAATAGCC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTTGGATTGCTCAGATaGGGTGGTAATCTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFGLLR*GGNLEV
Trigger: CACCTCTAGATTACCACCCAATCTGAGCAATCCAAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATTAGCATCACTTAATTaGTGTAAGCCTCCTTGGACA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLASLN*CKPPWT
Trigger: TGTCCAAGGAGGCTTACACAAATTAAGTGATGCTAA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATATACTACTGACAGGTaGGTTGTGGTCTTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKYTTDR*VVVFSS
Trigger: ACTTGAAAAGACCACAACCAACCTGTCAGTAGTATA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACTCAGTACCTTAGCATaGTTCAAGTTGTCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKLSTLA*FKLSKL
Trigger: AAGCTTTGACAACTTGAACAATGCTAAGGTACTGAG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAACCAGAAAACATGTTTaGTGGACTAACGTATTCCCT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKTRKHV*WTNVFP
Trigger: AGGGAATACGTTAGTCCACAAAACATGTTTTCTGGT...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTCAGTGAACTAGCTTaGTTGAGTCTGCAGCATGCA +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFSELA*LSLQHA
Trigger: TGCATGCTGCAGACTCAACAAAGCTAGTTCACTGAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCCATTTTTGGAAATGTTaGCAAATTGGACACAACCAC +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAHFWKC*QIGHNH
Trigger: GTGGTTGTGTCCAATTTGCAAACATTTCCAAAAATG...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAATACTTCCTGTTCTTGTaGGCCAGCAGTTTAACAAAT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKYFLFL*ASSLTN
Trigger: ATTTGTTAAACTGCTGGCCAACAAGAACAGGAAGTA...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTCATTCAAGTAAAGTaGACACCACTCAGAAGCATT +
Preference number: 5 (lower is better)
Translates to: IYVYCPTRTSLDEQNPEAFIQVK*TPLRSI
Trigger: AATGCTTCTGAGTGGTGTCAACTTTACTTGAATGAA...GGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCAATTGTTTACTGCTTaGTGTGTGAAGGCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSQLFTA*CVKAGK
Trigger: TTTTCCAGCCTTCACACACAAAGCAGTAAACAATTG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS CCA 90 bp CTTCTGCTCCTGTTCTTGAAAGCACCTGTGAAGAAGATCTTGCTTTaGGATCACATTATTTGGAAAATATTGCATGTGATGCAAGTTTTG +
Preference number: 5 (lower is better)
Translates to: LLLLFLKAPVKKILL*DHIIWKILHVMQVL
Trigger: CAAAACTTGCATCACATGCAATATTTTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTCACAGGTGCTTTCAAGAACAGGAGCAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACTTTAACTGCATTTTCTaGGGCTACAGAACTCACAGA +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNFNCIF*GYRTHR
Trigger: TCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAAA...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAAGAATCTCTTGCTCTTaGTTTCTCATCAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKRISCS*FLINCW
Trigger: CCAGCAGTTGATGAGAAACAAAGAGCAAGAGATTCT...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGGAATTTCCAGTGTATaGTTTGGAGGTCATTTGATT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKGISSV*FGGHLI
Trigger: AATCAAATGACCTCCAAACAATACACTGGAAATTCC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AATATAAAGGCTACATCCACAAAGCTTAACCCCCAACTACACATTAAGGGCTCTGGAATTTCCAGTGTATaGTTTGGAGGTCATTTGATT +
Preference number: 5 (lower is better)
Translates to: NIKATSTKLNPQLHIKGSGISSV*FGGHLI
Trigger: AATCAAATGACCTCCAAACAATACACTGGAAATTCC...AGAGCCCTTAATGTGTAGTTGGGGGTTAAGCTTTGTGGATGTAGCCTTTATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCGGAATTTCCAGTGTATaGTTTGGAGGTCATTTGATT +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSGISSV*FGGHLI
Trigger: AATCAAATGACCTCCAAACAATACACTGGAAATTCC...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAACTGCACATGAGCTTTaGGTAAATGGTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKTAHEL*VNGLFW
Trigger: CCAAAACAGACCATTTACCAAAAGCTCATGTGCAGT...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCCGAACTCGCTTGATTTaGAATACTGATTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSRTRLI*NTDFHH
Trigger: ATGGTGAAAATCAGTATTCAAAATCAAGCGAGTTCG...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACGAACTCGCTTGATTTaGAATACTGATTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKRTRLI*NTDFHH
Trigger: ATGGTGAAAATCAGTATTCAAAATCAAGCGAGTTCG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACTGCAAGTTTTGGGTCTaGTTTCCTGCAAAAAGTTCA +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNCKFWV*FPAKSS
Trigger: TGAACTTTTTGCAGGAAACAAGACCCAAAACTTGCA...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAAGAAGAAGATCTTGCTTaGGGATCACATTATTTGGAA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKEEDLA*GSHYLE
Trigger: TTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTC...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCGCACAGGAAAAACATTaGCATGGTTATGTATCAAGT +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSAQEKH*HGYVSS
Trigger: ACTTGATACATAACCATGCAAATGTTTTTCCTGTGC...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAACCTTTTTCCATGTTTaGTTTTCTGGTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPTFFHV*FSGGAV
Trigger: CACAGCACCACCAGAAAACAAAACATGGAAAAAGGT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGACCTTTTTCCATGTTTaGTTTTCTGGTGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMTFFHV*FSGGAV
Trigger: CACAGCACCACCAGAAAACAAAACATGGAAAAAGGT...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTCAATGATGCTCTTTaGCTGCACATTATCACAGCT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLNDAL*LHIITA
Trigger: AGCTGTGATAATGTGCAGCAAAAGAGCATCATTGAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAAACTTGCTTCTGTGATTaGAGAGTAAGAGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKTCFCD*RVRALW
Trigger: CCATAAGGCTCTTACTCTCAAATCACAGAAGCAAGT...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAACTTGCTTCTGTGATTaGAGAGTAAGAGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPTCFCD*RVRALW
Trigger: CCATAAGGCTCTTACTCTCAAATCACAGAAGCAAGT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGCAGCTGTTCTTTTGGTaGGTGTCTTTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVQLFFW*VSFLKK
Trigger: CTTCTTCAGAAAAGACACCAACCAAAAGAACAGCTG...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACAGATGGGAAATCATATaGAGTCTTGACAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNRWEII*SLDRCI
Trigger: GATACACCTGTCAAGACTCAATATGATTTCCCATCT...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACAGTACTTGTTTGATTaGTGTTCCATGACTATGCAA +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKQYLFD*CSMTMQ
Trigger: TTGCATAGTCATGGAACACAAATCAAACAAGTACTG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGTCTGCTCAATCCTCTaGTTAAAGAGGACACTTAAG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPVCSIL*LKRTLK
Trigger: CTTAAGTGTCCTCTTTAACAAGAGGATTGAGCAGAC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGGCCTTTAAACATTTTTGGAAATGTTaGCAAATTGGACACAACCAC +
Preference number: 5 (lower is better)
Translates to: VYCPTRTSLDEQNPEAFKHFWKC*QIGHNH
Trigger: GTGGTTGTGTCCAATTTGCAAACATTTCCAAAAATG...TTTAAAGGCCTCTGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACTATACTTCCTGTTCTaGTTGGCCAGCAGTTTAACA +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPLYFLF*LASSLT
Trigger: TGTTAAACTGCTGGCCAACAAGAACAGGAAGTATAG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp AGTCTTCTACATGCAGGAGTAAAGGCAAGTACTTGTATACCTGTGATTGATAGCTCGTTTTATTGTGCTTaGTTCTTTTGTGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: SLLHAGVKASTCIPVIDSSFYCA*FFCESQ
Trigger: CTGTGACTCACAAAAGAACAAAGCACAATAAAACGA...GCTATCAATCACAGGTATACAAGTACTTGCCTTTACTCCTGCATGTAGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTTTAACTGCATTTTCTaGGGCTACAGAACTCACAGA +
Preference number: 5 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMFNCIF*GYRTHR
Trigger: TCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAAA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTTAACTGCATTTTCTaGGGCTACAGAACTCACAGA +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFNCIF*GYRTHR
Trigger: TCTGTGAGTTCTGTAGCCCAAGAAAATGCAGTTAAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAAACAGGTATTTAGCATaGCAGCTAGTTTACTGGCAT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPNRYLA*QLVYWH
Trigger: ATGCCAGTAAACTAGCTGCAATGCTAAATACCTGTT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACGTATTTTGCATGCACTaGATTTCATGGTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNVFCMH*ISWSDY
Trigger: ATAGTCAGACCATGAAATCAAGTGCATGCAAAATAC...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATGCAAGTTTTGGGTCTaGTTTCCTGCAAAAAGTTCA +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPCKFWV*FPAKSS
Trigger: TGAACTTTTTGCAGGAAACAAGACCCAAAACTTGCA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp CACTTAGGGAAATTCACTATTTCTGCCAGGCCACTAGATGATTATTTAGTGAACGAAGAAGATCTTGCTTaGGGATCACATTATTTGGAA +
Preference number: 5 (lower is better)
Translates to: HLGKFTISARPLDDYLVNEEDLA*GSHYLE
Trigger: TTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTC...GTTCACTAAATAATCATCTAGTGGCCTGGCAGAAATAGTGAATTTCCCTAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAACCTGTGAAGAAGATCTaGCTTTGGGATCACATTATT +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKPVKKI*LWDHII
Trigger: AATAATGTGATCCCAAAGCAAGATCTTCTTCACAGG...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACCTGTGAAGAAGATCTaGCTTTGGGATCACATTATT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPPVKKI*LWDHII
Trigger: AATAATGTGATCCCAAAGCAAGATCTTCTTCACAGG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGTCTTTTCTGAAGAAGTaGTTTGCTGCTCTAAAGCTG +
Preference number: 5 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMSFLKK*FAALKL
Trigger: CAGCTTTAGAGCAGCAAACAACTTCTTCAGAAAAGA...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GAAATAGACTATATCTTCCCTTATGACCAAAGCACCACCTACTGCTTGTTTAAATCTTTTCTGAAGAAGTaGTTTGCTGCTCTAAAGCTG +
Preference number: 5 (lower is better)
Translates to: EIDYIFPYDQSTTYCLFKSFLKK*FAALKL
Trigger: CAGCTTTAGAGCAGCAAACAACTTCTTCAGAAAAGA...TTTAAACAAGCAGTAGGTGGTGCTTTGGTCATAAGGGAAGATATAGTCTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATTTTATAGTCCATGTTaGGATTGCTCAGATTGGGTG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPFYSPC*DCSDWV
Trigger: CACCCAATCTGAGCAATCCAAACATGGACTATAAAA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATATACTACTGACAGGTaGGTTGTGGTCTTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPYTTDR*VVVFSS
Trigger: ACTTGAAAAGACCACAACCAACCTGTCAGTAGTATA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAACCAGAAAACATGTTTaGTGGACTAACGTATTCCCT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPTRKHV*WTNVFP
Trigger: AGGGAATACGTTAGTCCACAAAACATGTTTTCTGGT...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCATACTTCCTGTTCTTGTaGGCCAGCAGTTTAACAAAT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPYFLFL*ASSLTN
Trigger: ATTTGTTAAACTGCTGGCCAACAAGAACAGGAAGTA...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGCCTGTTAATACAACATaGATTCTGCAGCCTATGGAT +
Preference number: 5 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVPVNTT*ILQPMD
Trigger: ATCCATAGGCTGCAGAATCAATGTTGTATTAACAGG...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS-3UTR CAA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCAATTGTTTACTGCTTaGTGTGTGAAGGCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMQLFTA*CVKAGK
Trigger: TTTTCCAGCCTTCACACACAAAGCAGTAAACAATTG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS GCA 90 bp TCTCTGAAACTAGGTGTGTATTGTTTGAACAAGAAACCTGTATTTTaGATGCACTTGATTTCATGGTCTGACTATAAGGGGAATTTCTAC +
Preference number: 5 (lower is better)
Translates to: SLKLGVYCLNKKPVF*MHLISWSDYKGNFY
Trigger: GTAGAAATTCCCCTTATAGTCAGACCATGAAATCAAGTGCATGCAAAATACAGGTTTCTTGTTCAAACAATACACACCTAGTTTCAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATTTATATGAAAGGCCTTCTCTGCATTATCTCGCTCATAAGAGTCTTCTACATGCATAAGTTTTTCAGTTaGGGAATCTGCTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: IYMKGLLCIISLIRVFYMHKFFS*GICSLL
Trigger: CAACAAAGAGCAGATTCCCAAACTGAAAAACTTATG...CATGTAGAAGACTCTTATGAGCGAGATAATGCAGAGAAGGCCTTTCATATAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305737.6
ENST00000413648.2
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGAGTCTCGAACTCGCTaGATTTTGAATACTGATTTT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPESRTR*ILNTDF
Trigger: AAAATCAGTATTCAAAATCAAGCGAGTTCGAGACTC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCAGTATTTTGCATGCACTaGATTTCATGGTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPVFCMH*ISWSDY
Trigger: ATAGTCAGACCATGAAATCAAGTGCATGCAAAATAC...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp GTACATATATACGTTTATTGTCCTACAAGGACTTCACTGGATGAGCAAAATCCACAAGAAACCTGTATTTaGCATGCACTTGATTTCATG +
Preference number: 5 (lower is better)
Translates to: VHIYVYCPTRTSLDEQNPQETCI*HALDFM
Trigger: CATGAAATCAAGTGCATGCAAAATACAGGTTTCTTG...TGGATTTTGCTCATCCAGTGAAGTCCTTGTAGGACAATAAACGTATATATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS-3UTR CAA 90 bp ATATTGAAATTAGGCCAATTAATAACCCTACAGTGGCCTCTAAGTGTTCAAGTGGAAGAAGATCTTGCTTaGGGATCACATTATTTGGAA +
Preference number: 5 (lower is better)
Translates to: ILKLGQLITLQWPLSVQVEEDLA*GSHYLE
Trigger: TTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTC...CACTTGAACACTTAGAGGCCACTGTAGGGTTATTAATTGGCCTAATTTCAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS CCA 72 bp CCGGCGGCACCTGGGGCCGTACAGCGGGGCGCGCAGTaGAGACCTGGGCTGCCCTCACGCCGTGCAGTGGCG +
Preference number: 6 (lower is better)
Translates to: PAAPGAVQRGAQ*RPGLPSRRAVA
Trigger: CGCCACTGCACGGCGTGAGGGCAGCCCAGGTCTCCACTGCGCGCCCCGCTGTACGGCCCCAGGTGCCGCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp GATTCCTTCCCACACCAGGATGAGAATCACAATCACTaGAGCCTCACAGGTGTGGCCAGCTCGCTCCCGCAC +
Preference number: 6 (lower is better)
Translates to: DSFPHQDENHNH*SLTGVASSLPH
Trigger: GTGCGGGAGCGAGCTGGCCACACCTGTGAGGCTGCAGTGATTGTGATTCTCATCCTGGTGTGGGAAGGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS TCA 72 bp CAGCCAGAGACAGCGGGATTCCTTCCCACACCAGGATaGGAATCACAATCACTGCAGCCTCACAGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: QPETAGFLPTPG*ESQSLQPHRCG
Trigger: GCCACACCTGTGAGGCTGCAGTGATTGTGATTCTCATCCTGGTGTGGGAAGGAATCCCGCTGTCTCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp GTTCCATCAGGCTTGCTTCGGGGCCATCCACAAGGCTaGCCTCTAGTTGAATTCTCGTTCTCGTCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: VPSGLLRGHPQG*PLVEFSFSSLS
Trigger: GCTGAGGGACGAGAACGAGAATTCAACTAGAGGGCAGCCTTGTGGATGGCCCCGAAGCAAGCCTGATGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413648.2
CDS CCA 72 bp GGTGAGGGCAGCAGCTCAGTCCCTTACTGCTCTTCCTaGATCATGTCCTATTGGCTGCTGCTGAGCCCATCT +
Preference number: 6 (lower is better)
Translates to: GEGSSSVPYCSS*IMSYWLLLSPS
Trigger: AGATGGGCTCAGCAGCAGCCAATAGGACATGATCCAGGAAGAGCAGTAAGGGACTGAGCTGCTGCCCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504042.5
CDS GCA 72 bp GTTCCATCAGGCTTGCTTCGGGGCCATCCACAAGGCTaGCCTCTAGTTGAATTCAGCAGCTCAGTCCCTTAC +
Preference number: 6 (lower is better)
Translates to: VPSGLLRGHPQG*PLVEFSSSVPY
Trigger: GTAAGGGACTGAGCTGCTGAATTCAACTAGAGGGCAGCCTTGTGGATGGCCCCGAAGCAAGCCTGATGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000514870.1
CDS CCA 72 bp AGCATCACAGGCCTCACTCACCACTGCAGCTGGCTTTaGAGGCAGCTCAGAGTTAGAGGTCTGTGCGGAATT +
Preference number: 6 (lower is better)
Translates to: SITGLTHHCSWL*RQLRVRGLCGI
Trigger: AATTCCGCACAGACCTCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCCTGTGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp ATCATCAGCATCACAGGCCTCACTCACCACTGCAGCTaGCTTTGGAGGCAGCTCAGAGTTAGAGGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: IISITGLTHHCS*LWRQLRVRGLC
Trigger: GCACAGACCTCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCCTGTGATGCTGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp AGGATGAGAATCACAATCACTGCAGCCTCACAGGTGTaGCCAGCTCGCTCCCGCACCAAACACAGTAGCTTC +
Preference number: 6 (lower is better)
Translates to: RMRITITAASQV*PARSRTKHSSF
Trigger: GAAGCTACTGTGTTTGGTGCGGGAGCGAGCTGGCCACACCTGTGAGGCTGCAGTGATTGTGATTCTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp CTGAATGTTTGCCAGCCTCGTTCTCGTCCCTCAGCCTaGCAGCAATCCAGCAGTTGCAGTCGGGTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: LNVCQPRSRPSA*QQSSSCSRVSF
Trigger: AAAGGAGACCCGACTGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAGAACGAGGCTGGCAAACATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000504042.5
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp ATCAGCATCATCAGCATCACAGGCCTCACTCACCACTaGAGCTGGCTTTGGAGGCAGCTCAGAGTTAGAGGT +
Preference number: 6 (lower is better)
Translates to: ISIISITGLTHH*SWLWRQLRVRG
Trigger: ACCTCTAACTCTGAGCTGCCTCCAAAGCCAGCTGCAGTGGTGAGTGAGGCCTGTGATGCTGATGATGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp CCTCAACATGGTTGGTTCTATCCTGTTCCATCAGGCTaGCTTCGGGGCCATCCACAAGGCTGCCCTCTAGTT +
Preference number: 6 (lower is better)
Translates to: PQHGWFYPVPSG*LRGHPQGCPLV
Trigger: AACTAGAGGGCAGCCTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS CAA 90 bp GTCTGTTGCCCTCAACATGGTTGGTTCTATCCTGTTCCATCAGGCTaGCTTCGGGGCCATCCACAAGGCTGCCCTCTAGTTGAATTCAGC +
Preference number: 6 (lower is better)
Translates to: VCCPQHGWFYPVPSG*LRGHPQGCPLVEFS
Trigger: GCTGAATTCAACTAGAGGGCAGCCTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000514870.1
CDS CAA 90 bp GTCTGTTGCCCTCAACATGGTTGGTTCTATCCTGTTCCATCAGGCTaGCTTCGGGGCCATCCACAAGGCTGCCCTCTAGTTGAATTCTCG +
Preference number: 6 (lower is better)
Translates to: VCCPQHGWFYPVPSG*LRGHPQGCPLVEFS
Trigger: CGAGAATTCAACTAGAGGGCAGCCTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413648.2
CDS GCA 72 bp CGTTCTCGTCCCTCAGCCTTGCAGCAATCCAGCAGTTaGAGTCGGGTCTCCTTTCTAACAAATCCTAAAGGG +
Preference number: 6 (lower is better)
Translates to: RSRPSALQQSSS*SRVSFLTNPKG
Trigger: CCCTTTAGGATTTGTTAGAAAGGAGACCCGACTGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000380013.9
ENST00000413648.2
ENST00000504042.5
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp GTTCCATCAGGCTTGCTTCGGGGCCATCCACAAGGCTaGCCTCTAGTTGAATTTGCTCTTCCTGGATCATGT +
Preference number: 6 (lower is better)
Translates to: VPSGLLRGHPQG*PLVEFALPGSC
Trigger: ACATGATCCAGGAAGAGCAAATTCAACTAGAGGGCAGCCTTGTGGATGGCCCCGAAGCAAGCCTGATGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp TTGGAGAAGTGCACCTGGTGTGAGGGTTTTTGGAACTaGAGATGTTGGTCCACTGTACCTTGGGACTGCCCT +
Preference number: 6 (lower is better)
Translates to: LEKCTWCEGFWN*RCWSTVPWDCP
Trigger: AGGGCAGTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAAAAACCCTCACACCAGGTGCACTTCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp GGCTGGAAGGCTCAGCCCAGCGCTGACTTATGTACCTaGAGAAAAGTGAGTTCTGGTCTTGTTTGGGGAACC +
Preference number: 6 (lower is better)
Translates to: GWKAQPSADLCT*RKVSSGLVWGT
Trigger: GGTTCCCCAAACAAGACCAGAACTCACTTTTCTCAAGGTACATAAGTCAGCGCTGGGCTGAGCCTTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514870.1
CDS CAA 90 bp GTCTGTTGCCCTCAACATGGTTGGTTCTATCCTGTTCCATCAGGCTaGCTTCGGGGCCATCCACAAGGCTGCCCTCTAGTTGAATTTGCT +
Preference number: 6 (lower is better)
Translates to: VCCPQHGWFYPVPSG*LRGHPQGCPLVEFA
Trigger: AGCAAATTCAACTAGAGGGCAGCCTTGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp GGTGATGGTATCAGGAATGGACTTAGTCTGTTGCCCTCAACATGGTaGGTTCTATCCTGTTCCATCAGGCTTGCTTCGGGGCCATCCACA +
Preference number: 6 (lower is better)
Translates to: GDGIRNGLSLLPSTW*VLSCSIRLASGPST
Trigger: TGTGGATGGCCCCGAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGATACCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS TCA 72 bp AAAGAGTGCCACTTGGTGTCTCCATTTACTTCTGGATaGGCTCTCTCAGGCAGTGGGCTTCCATTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: KECHLVSPFTSG*ALSGSGLPFWS
Trigger: GCTCCAGAATGGAAGCCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGACACCAAGTGGCACTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS TCA 72 bp CTCAGAGTTAGAGGTCTGTGCGGAATTGATCTGCCCTaGGGTATGCGATGGGTGAGTGATCTCACAGGACAA +
Preference number: 6 (lower is better)
Translates to: LRVRGLCGIDLP*GMRWVSDLTGQ
Trigger: TTGTCCTGTGAGATCACTCACCCATCGCATACCTCAGGGCAGATCAATTCCGCACAGACCTCTAACTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp ACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTaGTGGAACCTGAACAGAATTCTTCACCAGACGCTA +
Preference number: 6 (lower is better)
Translates to: TVQSCHQELANC*WNLNRILHQTL
Trigger: TAGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp GTTGAATTCAGCAGCTCAGTCCCTTACTGCTCTTCCTaGATCATGTCCTATTGGCTGCTGCTGAGCCCATCT +
Preference number: 6 (lower is better)
Translates to: VEFSSSVPYCSS*IMSYWLLLSPS
Trigger: AGATGGGCTCAGCAGCAGCCAATAGGACATGATCCAGGAAGAGCAGTAAGGGACTGAGCTGCTGAATTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000514870.1
CDS CCA 72 bp TCAGGAATGGACTTAGTCTGTTGCCCTCAACATGGTTaGTTCTATCCTGTTCCATCAGGCTTGCTTCGGGGC +
Preference number: 6 (lower is better)
Translates to: SGMDLVCCPQHG*FYPVPSGLLRG
Trigger: GCCCCGAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS CCA 72 bp GTCTCCATTTACTTCTGGATGAGCTCTCTCAGGCAGTaGGCTTCCATTCTGGAGCTTTGTAGCCAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: VSIYFWMSSLRQ*ASILELCSQRF
Trigger: GAACCTCTGGCTACAAAGCTCCAGAATGGAAGCCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS CCA 72 bp GTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTaGAACCTGAACAGAATTCTTCACCAGACGCTAGCT +
Preference number: 6 (lower is better)
Translates to: VQSCHQELANCC*NLNRILHQTLA
Trigger: AGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp CAACTTGGTACATTTGTGACTTGTGCTCCAGCTGTGTaGTTTTCTGGGTGTAAGCTTGCCTTGGGAGCCCCC +
Preference number: 6 (lower is better)
Translates to: QLGTFVTCAPAV*FSGCKLALGAP
Trigger: GGGGGCTCCCAAGGCAAGCTTACACCCAGAAAACAACACAGCTGGAGCACAAGTCACAAATGTACCAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp TTTTCTGGTGGTGCTGTGTGCATACAGGCATGTGGCTaGCATCCAGGTTCCACCTTAATTGGCCTGTGCATC +
Preference number: 6 (lower is better)
Translates to: FSGGAVCIQACG*HPGSTLIGLCI
Trigger: GATGCACAGGCCAATTAAGGTGGAACCTGGATGCAAGCCACATGCCTGTATGCACACAGCACCACCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp GTCTGGCAAATGGGAGGTGATGGTATCAGGAATGGACTTAGTCTGTaGCCCTCAACATGGTTGGTTCTATCCTGTTCCATCAGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: VWQMGGDGIRNGLSL*PSTWLVLSCSIRLA
Trigger: AGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGATACCATCACCTCCCATTTGCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS CAA 90 bp CCAAACGAAGCTGATTCGGGAGAAGCACAAAGCCGGGACACAGATTaGTCCATAAATTCTCTTACATACATTCCCCAGGCTGGAAGGCTC +
Preference number: 6 (lower is better)
Translates to: PNEADSGEAQSRDTD*SINSLTYIPQAGRL
Trigger: GAGCCTTCCAGCCTGGGGAATGTATGTAAGAGAATTTATGGACAAATCTGTGTCCCGGCTTTGTGCTTCTCCCGAATCAGCTTCGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514870.1
CDS TCA 72 bp TTGCATCCAGGTTCCACCTTAATTGGCCTGTGCATCTaGCTATGGCAAGACTCAGTTTGGGGTTGCTGTGTT +
Preference number: 6 (lower is better)
Translates to: LHPGSTLIGLCI*LWQDSVWGCCV
Trigger: AACACAGCAACCCCAAACTGAGTCTTGCCATAGTCAGATGCACAGGCCAATTAAGGTGGAACCTGGATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp TTTGAAAGAGTGCCACTTGGTGTCTCCATTTACTTCTaGATGAGCTCTCTCAGGCAGTGGGCTTCCATTCTG +
Preference number: 6 (lower is better)
Translates to: FERVPLGVSIYF*MSSLRQWASIL
Trigger: CAGAATGGAAGCCCACTGCCTGAGAGAGCTCATCCAGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS CAA 72 bp AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATaGCTGCTGGAACCTGAACAGAATTCTTCACCAGAC +
Preference number: 6 (lower is better)
Translates to: KYRSELPPGACK*LLEPEQNSSPD
Trigger: GTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp TGCTGTGTTGGGGGCACAAGATCTCGTGTTTGCTCCTaGTCTCGACCCTTCAGAATCTCTTGCTCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: CCVGGTRSRVCS*SRPFRISCSLF
Trigger: AAACAAAGAGCAAGAGATTCTGAAGGGTCGAGACAAGGAGCAAACACGAGATCTTGTGCCCCCAACACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp CCCTTCAGAATCTCTTGCTCTTTGTTTCTCATCAACTGCTGGCAGTaGTCCTGTAGCTCTCCACTGCTACCAAAAATTGGTGGGTTATGC +
Preference number: 6 (lower is better)
Translates to: PFRISCSLFLINCWQ*SCSSPLLPKIGGLC
Trigger: GCATAACCCACCAATTTTTGGTAGCAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAACAAAGAGCAAGAGATTCTGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS TCA 72 bp GATGCCTCATTACGTTTTAGATGGGATTCCGCTTGGTaGAAACGAGGGGCCTTCAATTCAATCCATCCTGGT +
Preference number: 6 (lower is better)
Translates to: DASLRFRWDSAW*KRGAFNSIHPG
Trigger: ACCAGGATGGATTGAATTGAAGGCCCCTCGTTTTCACCAAGCGGAATCCCATCTAAAACGTAATGAGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp TGGGAGGTGATGGTATCAGGAATGGACTTAGTCTGTTaGCCTCAACATGGTTGGTTCTATCCTGTTCCATCA +
Preference number: 6 (lower is better)
Translates to: WEVMVSGMDLVC*PQHGWFYPVPS
Trigger: TGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGATACCATCACCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS GCA 72 bp AGATGCTGCTCCATGGTCTCAATGATGCTCTTTTGCTaGACATTATCACAGCTTGCAGGTGGATTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: RCCSMVSMMLFC*TLSQLAGGFSC
Trigger: GCAAGAGAATCCACCTGCAAGCTGTGATAATGTGCAGCAAAAGAGCATCATTGAGACCATGGAGCAGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp AACCTGAACAGAATTCTTCACCAGACGCTAGCTTTGTaGTTCCCTGGATGTTATTTTCTGCAGGAGATGGGC +
Preference number: 6 (lower is better)
Translates to: NLNRILHQTLAL*FPGCYFLQEMG
Trigger: GCCCATCTCCTGCAGAAAATAACATCCAGGGAACCACAAAGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp TCTGAAGAAGTTGTTTGCTGCTCTAAAGCTGGGGTGTaGCTATCAAGTTCTGCAGCAGTGGTTTGTCTAGTC +
Preference number: 6 (lower is better)
Translates to: SEEVVCCSKAGV*LSSSAAVVCLV
Trigger: GACTAGACAAACCACTGCTGCAGAACTTGATAGCCACACCCCAGCTTTAGAGCAGCAAACAACTTCTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp ATGGGAGGTGATGGTATCAGGAATGGACTTAGTCTGTaGCCCTCAACATGGTTGGTTCTATCCTGTTCCATC +
Preference number: 6 (lower is better)
Translates to: MGGDGIRNGLSL*PSTWLVLSCSI
Trigger: GATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTCCATTCCTGATACCATCACCTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS CAA 72 bp GCTGATTCGGGAGAAGCACAAAGCCGGGACACAGATTaGTCCATAAATTCTCTTACATACATTCCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: ADSGEAQSRDTD*SINSLTYIPQA
Trigger: AGCCTGGGGAATGTATGTAAGAGAATTTATGGACAAATCTGTGTCCCGGCTTTGTGCTTCTCCCGAATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514870.1
CDS CAA 90 bp AATTGCTGCTGGAACCTGAACAGAATTCTTCACCAGACGCTAGCTTaGTGGTTCCCTGGATGTTATTTTCTGCAGGAGATGGGCATATCT +
Preference number: 6 (lower is better)
Translates to: NCCWNLNRILHQTLA*WFPGCYFLQEMGIS
Trigger: AGATATGCCCATCTCCTGCAGAAAATAACATCCAGGGAACCACAAAGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp GGGTTTTTGGAACTGGAGATGTTGGTCCACTGTACCTaGGGACTGCCCTTGATTCATTTCAACTTGGTACAT +
Preference number: 6 (lower is better)
Translates to: GFLELEMLVHCT*GLPLIHFNLVH
Trigger: ATGTACCAAGTTGAAATGAATCAAGGGCAGTCCCAAGGTACAGTGGACCAACATCTCCAGTTCCAAAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp TTGGCTTACCCCGAAGTTACGTCTTTCTCCATTAGCCTTTTGGTCTaGTTTCAATTTCTTGATCTGAAGGAGCCCAGAGAGAGAAGGTTC +
Preference number: 6 (lower is better)
Translates to: LAYPEVTSFSISLLV*FQFLDLKEPRERRF
Trigger: GAACCTTCTCTCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAGACCAAAAGGCTAATGGAGAAAGACGTAACTTCGGGGTAAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp CAAATCGGAGACATTTGGTTGACTGCTTTCACCTGGATTTCTTTCTaGGCTTACCCCGAAGTTACGTCTTTCTCCATTAGCCTTTTGGTC +
Preference number: 6 (lower is better)
Translates to: QIGDIWLTAFTWISF*AYPEVTSFSISLLV
Trigger: GACCAAAAGGCTAATGGAGAAAGACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp TTTTGTTTTAAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATaGCTGCTGGAACCTGAACAGAATTCTTCACCAGACGCTAGCTTT +
Preference number: 6 (lower is better)
Translates to: FCFKYRSELPPGACK*LLEPEQNSSPDASF
Trigger: AAAGCTAGCGTCTGGTGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATTTAAAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS TCA 72 bp GCTCTCCACTGCTACCAAAAATTGGTGGGTTATGCTTaGGGTGTTCTGACATTGGTCTTGTTTTCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: ALHCYQKLVGYA*GVLTLVLFSQN
Trigger: GTTCTGAGAAAACAAGACCAATGTCAGAACACCTCAAGCATAACCCACCAATTTTTGGTAGCAGTGGAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS TCA 72 bp GGACTGCCCTTGATTCATTTCAACTTGGTACATTTGTaGCTTGTGCTCCAGCTGTGTTGTTTTCTGGGTGTA +
Preference number: 6 (lower is better)
Translates to: GLPLIHFNLVHL*LVLQLCCFLGV
Trigger: TACACCCAGAAAACAACACAGCTGGAGCACAAGTCACAAATGTACCAAGTTGAAATGAATCAAGGGCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp TGTTTTAAATACCGTTCAGAGCTGCCACCAGGAGCTTaGAAATTGCTGCTGGAACCTGAACAGAATTCTTCA +
Preference number: 6 (lower is better)
Translates to: CFKYRSELPPGA*KLLLEPEQNSS
Trigger: TGAAGAATTCTGTTCAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATTTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp ACTCAAATCGGAGACATTTGGTTGACTGCTTTCACCTaGATTTCTTTCTTGGCTTACCCCGAAGTTACGTCT +
Preference number: 6 (lower is better)
Translates to: TQIGDIWLTAFT*ISFLAYPEVTS
Trigger: AGACGTAACTTCGGGGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp CCCGAAGTTACGTCTTTCTCCATTAGCCTTTTGGTCTaGTTTCAATTTCTTGATCTGAAGGAGCCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: PEVTSFSISLLV*FQFLDLKEPRE
Trigger: CTCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAGACCAAAAGGCTAATGGAGAAAGACGTAACTTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp GCTTACCCCGAAGTTACGTCTTTCTCCATTAGCCTTTaGGTCTTGTTTCAATTTCTTGATCTGAAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: AYPEVTSFSISL*VLFQFLDLKEP
Trigger: GGGCTCCTTCAGATCAAGAAATTGAAACAAGACCAAAAGGCTAATGGAGAAAGACGTAACTTCGGGGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp ATCTCTTGCTCTTTGTTTCTCATCAACTGCTGGCAGTaGTCCTGTAGCTCTCCACTGCTACCAAAAATTGGT +
Preference number: 6 (lower is better)
Translates to: ISCSLFLINCWQ*SCSSPLLPKIG
Trigger: ACCAATTTTTGGTAGCAGTGGAGAGCTACAGGACAACTGCCAGCAGTTGATGAGAAACAAAGAGCAAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp TCTTTCTTGGCTTACCCCGAAGTTACGTCTTTCTCCATTAGCCTTTaGGTCTTGTTTCAATTTCTTGATCTGAAGGAGCCCAGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: SFLAYPEVTSFSISL*VLFQFLDLKEPRER
Trigger: TCTCTCTCTGGGCTCCTTCAGATCAAGAAATTGAAACAAGACCAAAAGGCTAATGGAGAAAGACGTAACTTCGGGGTAAGCCAAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp GTCAGGCACAGGAAAAACATTTGCATGGTTATGTATCAAGTACCTTaGCTGAGCAAGTTGCGCAGCTTGTTGACCAGACATATCTTGGTT +
Preference number: 6 (lower is better)
Translates to: VRHRKNICMVMYQVP*LSKLRSLLTRHILV
Trigger: AACCAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTGATACATAACCATGCAAATGTTTTTCCTGTGCCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS TCA 72 bp TGTGAGTTTGAAAATGGCTCAGTCTCTGAAGCCTGTTaGTTCAAGTGCTGTTTCAACACTGGGGACATAAGT +
Preference number: 6 (lower is better)
Translates to: CEFENGSVSEAC*FKCCFNTGDIS
Trigger: ACTTATGTCCCCAGTGTTGAAACAGCACTTGAATCAACAGGCTTCAGAGACTGAGCCATTTTCAAACTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp CTTTCTTATCACTCAAATCGGAGACATTTGGTTGACTaGTTTCACCTGGATTTCTTTCTTGGCTTACCCCGA +
Preference number: 6 (lower is better)
Translates to: LSYHSNRRHLVD*FHLDFFLGLPR
Trigger: TCGGGGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGAGTGATAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp CATTCATTTCATTTTGTTTTAAATACCGTTCAGAGCTaGCACCAGGAGCTTGCAAATTGCTGCTGGAACCTG +
Preference number: 6 (lower is better)
Translates to: HSFHFVLNTVQS*HQELANCCWNL
Trigger: CAGGTTCCAGCAGCAATTTGCAAGCTCCTGGTGGCAGCTCTGAACGGTATTTAAAACAAAATGAAATGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp TGTAGCTCTCCACTGCTACCAAAAATTGGTGGGTTATaGTTGAGGTGTTCTGACATTGGTCTTGTTTTCTCA +
Preference number: 6 (lower is better)
Translates to: CSSPLLPKIGGL*LRCSDIGLVFS
Trigger: TGAGAAAACAAGACCAATGTCAGAACACCTCAAGCATAACCCACCAATTTTTGGTAGCAGTGGAGAGCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp TGCATGGTTATGTATCAAGTACCTTTGCTGAGCAAGTaGCGCAGCTTGTTGACCAGACATATCTTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: CMVMYQVPLLSK*RSLLTRHILVS
Trigger: AGAAACCAAGATATGTCTGGTCAACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTGATACATAACCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp CCCAGAGAGAGAAGGTTCACTAACTGTGCGTTTTATTCCTCCATTTaGCAAACACTTGGAATACCCTCTACTTTCTTGTGTAAAGTCAGG +
Preference number: 6 (lower is better)
Translates to: PRERRFTNCAFYSSI*QTLGIPSTFLCKVR
Trigger: CCTGACTTTACACAAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATGGAGGAATAAAACGCACAGTTAGTGAACCTTCTCTCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS CAA 90 bp GTTTGGAGGTCATTTGATTGGAGAGATTGGGTTGATACTGAAGAATaGATGGCAGTGATGCCTCATTACGTTTTAGATGGGATTCCGCTT +
Preference number: 6 (lower is better)
Translates to: VWRSFDWRDWVDTEE*MAVMPHYVLDGIPL
Trigger: AAGCGGAATCCCATCTAAAACGTAATGAGGCATCACTGCCATCAATTCTTCAGTATCAACCCAATCTCTCCAATCAAATGACCTCCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS TCA 72 bp GGCTTCCCTTCATACAGGGTATTCCATAATAACTTTTaGAAGAGTGCCACTTGGTGTCTCCATTTACTTCTG +
Preference number: 6 (lower is better)
Translates to: GFPSYRVFHNNF*KSATWCLHLLL
Trigger: CAGAAGTAAATGGAGACACCAAGTGGCACTCTTTCAAAAGTTATTATGGAATACCCTGTATGAAGGGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS TCA 72 bp GCTACCAAAAATTGGTGGGTTATGCTTGAGGTGTTCTaGCATTGGTCTTGTTTTCTCAGAACACAATGGAAC +
Preference number: 6 (lower is better)
Translates to: ATKNWWVMLEVF*HWSCFLRTQWN
Trigger: GTTCCATTGTGTTCTGAGAAAACAAGACCAATGTCAGAACACCTCAAGCATAACCCACCAATTTTTGGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp TCCATTTTGCAAACACTTGGAATACCCTCTACTTTCTaGTGTAAAGTCAGGACTCACACGACTATTCTGGCT +
Preference number: 6 (lower is better)
Translates to: SILQTLGIPSTF*CKVRTHTTILA
Trigger: AGCCAGAATAGTCGTGTGAGTCCTGACTTTACACAAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS CAA 72 bp AGGAAAAACATTTGCATGGTTATGTATCAAGTACCTTaGCTGAGCAAGTTGCGCAGCTTGTTGACCAGACAT +
Preference number: 6 (lower is better)
Translates to: RKNICMVMYQVP*LSKLRSLLTRH
Trigger: ATGTCTGGTCAACAAGCTGCGCAACTTGCTCAGCAAAGGTACTTGATACATAACCATGCAAATGTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp TTTTATTCCTCCATTTTGCAAACACTTGGAATACCCTCTACTTTCTaGTGTAAAGTCAGGACTCACACGACTATTCTGGCTTCCCTTCAT +
Preference number: 6 (lower is better)
Translates to: FYSSILQTLGIPSTF*CKVRTHTTILASLH
Trigger: ATGAAGGGAAGCCAGAATAGTCGTGTGAGTCCTGACTTTACACAAGAAAGTAGAGGGTATTCCAAGTGTTTGCAAAATGGAGGAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000514870.1
ENST00000540549.5
CDS TCA 72 bp GATTCTTTCTTATCACTCAAATCGGAGACATTTGGTTaGCTGCTTTCACCTGGATTTCTTTCTTGGCTTACC +
Preference number: 6 (lower is better)
Translates to: DSFLSLKSETFG*LLSPGFLSWLT
Trigger: GGTAAGCCAAGAAAGAAATCCAGGTGAAAGCAGTCAACCAAATGTCTCCGATTTGAGTGATAAGAAAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS TCA 72 bp TGTGGTAGTGGCAGAAAAGGAATCCTTAGTGAACACTaGGCTTTGCTTGAAGTAAGCACCATTCATTTCATT +
Preference number: 6 (lower is better)
Translates to: CGSGRKGILSEH*ALLEVSTIHFI
Trigger: AATGAAATGAATGGTGCTTACTTCAAGCAAAGCTCAGTGTTCACTAAGGATTCCTTTTCTGCCACTACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS GCA 72 bp AAAACTGTGACTGGCCCTGACATTTCAACTTTTACTTaGTTCTGTGATTTGAGAGTAAGAGCCTTATGGTCA +
Preference number: 6 (lower is better)
Translates to: KTVTGPDISTFT*FCDLRVRALWS
Trigger: TGACCATAAGGCTCTTACTCTCAAATCACAGAAGCAAGTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp AGTACATTTCTGGCACTTACCTACACATCTGCAAGATaGGAAATCATATTGAGTCTTGACAGGTGTATCCAA +
Preference number: 6 (lower is better)
Translates to: STFLALTYTSAR*EIILSLDRCIQ
Trigger: TTGGATACACCTGTCAAGACTCAATATGATTTCCCATCTTGCAGATGTGTAGGTAAGTGCCAGAAATGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305737.6
CDS CAA 90 bp CTTGAAAGCACCTGTGAAGAAGATCTTGCTTTGGGATCACATTATTaGGAAAATATTGCATGTGATGCAAGTTTTGGGTCTTGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: LESTCEEDLALGSHY*ENIACDASFGSCFL
Trigger: CAGGAAACAAGACCCAAAACTTGCATCACATGCAATATTTTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTCACAGGTGCTTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp AAGTTTGGGAGAGAGATTACCATTACATTAGGAATAAATTCATACTaGACAAACAAGTGTCAACTGTCTCCACTGTCTTACCAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: KFGREITITLGINSY*TNKCQLSPLSYQQL
Trigger: GAGCTGCTGGTAAGACAGTGGAGACAGTTGACACTTGTTTGTCAAGTATGAATTTATTCCTAATGTAATGGTAATCTCTCTCCCAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505801.1
CDS CAA 72 bp CTGCTCCTGTTCTTGAAAGCACCTGTGAAGAAGATCTaGCTTTGGGATCACATTATTTGGAAAATATTGCAT +
Preference number: 6 (lower is better)
Translates to: LLLFLKAPVKKI*LWDHIIWKILH
Trigger: ATGCAATATTTTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTCACAGGTGCTTTCAAGAACAGGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp ACTTCTGCTCCTGTTCTTGAAAGCACCTGTGAAGAAGATCTTGCTTaGGGATCACATTATTTGGAAAATATTGCATGTGATGCAAGTTTT +
Preference number: 6 (lower is better)
Translates to: TSAPVLESTCEEDLA*GSHYLENIACDASF
Trigger: AAAACTTGCATCACATGCAATATTTTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTCACAGGTGCTTTCAAGAACAGGAGCAGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CCA 72 bp CTGTTCTTGAAAGCACCTGTGAAGAAGATCTTGCTTTaGGATCACATTATTTGGAAAATATTGCATGTGATG +
Preference number: 6 (lower is better)
Translates to: LFLKAPVKKILL*DHIIWKILHVM
Trigger: CATCACATGCAATATTTTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTCACAGGTGCTTTCAAGAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp ACCTGTGAAGAAGATCTTGCTTTGGGATCACATTATTaGGAAAATATTGCATGTGATGCAAGTTTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: TCEEDLALGSHY*ENIACDASFGS
Trigger: AGACCCAAAACTTGCATCACATGCAATATTTTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTCACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 72 bp CCTGTTCTTGAAAGCACCTGTGAAGAAGATCTTGCTTaGGGATCACATTATTTGGAAAATATTGCATGTGAT +
Preference number: 6 (lower is better)
Translates to: PVLESTCEEDLA*GSHYLENIACD
Trigger: ATCACATGCAATATTTTCCAAATAATGTGATCCCAAAGCAAGATCTTCTTCACAGGTGCTTTCAAGAACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5
CDS CAA 90 bp TCAGGATGTGTAGTCTGTTCTTTATTCTCTGAAACTAGGTGTGTATaGTTTGAACAAGAAACCTGTATTTTGCATGCACTTGATTTCATG +
Preference number: 6 (lower is better)
Translates to: SGCVVCSLFSETRCV*FEQETCILHALDFM
Trigger: CATGAAATCAAGTGCATGCAAAATACAGGTTTCTTGTTCAAACAATACACACCTAGTTTCAGAGAATAAAGAACAGACTACACATCCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265149.9
ENST00000305737.6
ENST00000380013.9
ENST00000413648.2
ENST00000513237.5
ENST00000540549.5