RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TESPA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135426

Ensembl transcript IDs: ENST00000316577.12, ENST00000449076.6, ENST00000524622.5, ENST00000524668.5, ENST00000524923.5, ENST00000524959.5, ENST00000525978.5, ENST00000526532.5, ENST00000528240.1, ENST00000531122.5, ENST00000532757.5, ENST00000532804.5, ENST00000533446.5, ENST00000533607.1

Found 755 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCTGGTGGTGGTGGGGGTGCCTGGGTCTGCTGGGCCAGCGACTCTaGCTCTGCTCCTCCTCACTGTTGCTTTGCACCTCCTCCAAGTCA +
Preference number: 1 (lower is better)
Translates to: VWWWWGCLGLLGQRL*LCSSSLLLCTSSKS
Trigger: TGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACCACCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp GTGGTGGCCGGTCTCGGGGGCATGTGTACAGACACATCTTGGAGATaGCTTTCCGAAGGCGGTCTCTGGGTGACTGGGGTTCAGGCTCTC +
Preference number: 1 (lower is better)
Translates to: VVAGLGGMCTDTSWR*LSEGGLWVTGVQAL
Trigger: GAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp TTCACGAGTCTTTGCCAGCAAAAGTCTGGTGGTGGTGGGGGTGCCTaGGTCTGCTGGGCCAGCGACTCTGACTCTGCTCCTCCTCACTGT +
Preference number: 1 (lower is better)
Translates to: FTSLCQQKSGGGGGA*VCWASDSDSAPPHC
Trigger: ACAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACCACCAGACTTTTGCTGGCAAAGACTCGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp AGACACATCTTGGAGATGGCTTTCCGAAGGCGGTCTCTGGGTGACTaGGGTTCAGGCTCTCGGGACAGAATCCTGATGGATGGCACATCA +
Preference number: 1 (lower is better)
Translates to: RHILEMAFRRRSLGD*GSGSRDRILMDGTS
Trigger: TGATGTGCCATCCATCAGGATTCTGTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR TCA 90 bp GGCGGTCTCTGGGTGACTGGGGTTCAGGCTCTCGGGACAGAATCCTaGTGGATGGCACATCAGTTGGATGGTTGCAATTCCAGAACATGT +
Preference number: 1 (lower is better)
Translates to: GGLWVTGVQALGTES*WMAHQLDGCNSRTC
Trigger: ACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR TCA 90 bp AGTGGGCAACTTCTTACCCTCAGCAGGGGGCACAGGATCTTCCTGTaGGAATTGCCCCAAATCAGAGTCTTGCTGGAGGAACTGCTTCTC +
Preference number: 1 (lower is better)
Translates to: SGQLLTLSRGHRIFL*ELPQIRVLLEELLL
Trigger: GAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCCTGCTGAGGGTAAGAAGTTGCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 90 bp GGATTCCAAATCGCTCAGTCTGGTCTTCCTCCCCATGTACCATGCTaGCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTA +
Preference number: 1 (lower is better)
Translates to: GFQIAQSGLPPHVPC*LSPAEFGGLEDQGV
Trigger: TACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCAGACTGAGCGATTTGGAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR GCA 90 bp TGTGGATTCCAAATCGCTCAGTCTGGTCTTCCTCCCCATGTACCATaGTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGA +
Preference number: 1 (lower is better)
Translates to: CGFQIAQSGLPPHVP*CLSPAEFGGLEDQG
Trigger: TCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCAGACTGAGCGATTTGGAATCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR GCA 90 bp CTGGGTCTGTGCTCCACTGTGGATCTTCTATGGGCAGAGAATGTGTaGAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGTG +
Preference number: 1 (lower is better)
Translates to: LGLCSTVDLLWAENV*NRVPWGSNPEFGMV
Trigger: CACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 90 bp GGCTGCTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTaGTTCCATTTCTGCTGGGTGATGGACAGGTCCAAGGACTTAACC +
Preference number: 1 (lower is better)
Translates to: GCWLKDRRSSGLSTL*FHFCWVMDRSKDLT
Trigger: GGTTAAGTCCTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp GACCGACGCAGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTGCTaGGTGATGGACAGGTCCAAGGACTTAACCTTCCTGCCCATGAGA +
Preference number: 1 (lower is better)
Translates to: DRRSSGLSTLCFHFC*VMDRSKDLTFLPMR
Trigger: TCTCATGGGCAGGAAGGTTAAGTCCTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 90 bp TGGCTGGTAGACTACACAGCTCTCTCCTTATCTGAGCTGGGTCTGTaGTCCACTGTGGATCTTCTATGGGCAGAGAATGTGTGCAACAGG +
Preference number: 1 (lower is better)
Translates to: WLVDYTALSLSELGL*STVDLLWAENVCNR
Trigger: CCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAGAGCTGTGTAGTCTACCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 90 bp AAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTaGTGGGTGATGGACAGGTCCAAGGACTTAACCTTCCTGCCCATG +
Preference number: 1 (lower is better)
Translates to: KDRRSSGLSTLCFHF*WVMDRSKDLTFLPM
Trigger: CATGGGCAGGAAGGTTAAGTCCTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 90 bp TCACTGTTGCTTTGCACCTCCTCCAAGTCAAAAGTGTCCTGTGGCTaGTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGC +
Preference number: 1 (lower is better)
Translates to: SLLLCTSSKSKVSCG*WLKDRRSSGLSTLC
Trigger: GCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTTTGACTTGGAGGAGGTGCAAAGCAACAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp CTCTCCTTATCTGAGCTGGGTCTGTGCTCCACTGTGGATCTTCTATaGGCAGAGAATGTGTGCAACAGGGTACCTTGGGGTTCGAATCCA +
Preference number: 1 (lower is better)
Translates to: LSLSELGLCSTVDLL*AENVCNRVPWGSNP
Trigger: TGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp ACTACACAGCTCTCTCCTTATCTGAGCTGGGTCTGTGCTCCACTGTaGATCTTCTATGGGCAGAGAATGTGTGCAACAGGGTACCTTGGG +
Preference number: 1 (lower is better)
Translates to: TTQLSPYLSWVCAPL*IFYGQRMCATGYLG
Trigger: CCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAGAGCTGTGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp CTGTTGCTTTGCACCTCCTCCAAGTCAAAAGTGTCCTGTGGCTGCTaGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGCTTC +
Preference number: 1 (lower is better)
Translates to: LLLCTSSKSKVSCGC*LKDRRSSGLSTLCF
Trigger: GAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTTTGACTTGGAGGAGGTGCAAAGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp GTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCACTGTaGACATCCTCTGCTGTGTTTCCTCTTCACAGCAGAAGACACATG +
Preference number: 1 (lower is better)
Translates to: VPWGSNPEFGMVLAL*TSSAVFPLHSRRHM
Trigger: CATGTGTCTTCTGCTGTGAAGAGGAAACACAGCAGAGGATGTCCACAGTGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp AGAGAATGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTaGGATGGTGCTAGCACTGTGGACATCCTCTGCTGTGTTTCCTCT +
Preference number: 1 (lower is better)
Translates to: RECVQQGTLGFESRV*DGASTVDILCCVSS
Trigger: AGAGGAAACACAGCAGAGGATGTCCACAGTGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp ACTGTGGATCTTCTATGGGCAGAGAATGTGTGCAACAGGGTACCTTaGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCACTGTGGACA +
Preference number: 1 (lower is better)
Translates to: TVDLLWAENVCNRVP*GSNPEFGMVLALWT
Trigger: TGTCCACAGTGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 90 bp GGGGGCACAGGATCTTCCTGTGAGAATTGCCCCAAATCAGAGTCTTaGTGGAGGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCC +
Preference number: 1 (lower is better)
Translates to: GGTGSSCENCPKSES*WRNCFSSFTLSITS
Trigger: GGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 90 bp AACTTCTTACCCTCAGCAGGGGGCACAGGATCTTCCTGTGAGAATTaGCCCAAATCAGAGTCTTGCTGGAGGAACTGCTTCTCTTCTTTC +
Preference number: 1 (lower is better)
Translates to: NFLPSAGGTGSSCEN*PKSESCWRNCFSSF
Trigger: GAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCCTGCTGAGGGTAAGAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp TCTGGATGTATACATGCAGGTCACAGGGGATATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAGTTTGGATCTGTGTCCTCACCCAAAT +
Preference number: 1 (lower is better)
Translates to: SGCIHAGHRGYDGLA*AQRPDSLDLCPHPN
Trigger: ATTTGGGTGAGGACACAGATCCAAACTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCATGTATACATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR CCA 90 bp GGGTTCAGGCTCTCGGGACAGAATCCTGATGGATGGCACATCAGTTaGATGGTTGCAATTCCAGAACATGTGGGATGGTGTGAACTTTTG +
Preference number: 1 (lower is better)
Translates to: GFRLSGQNPDGWHIS*MVAIPEHVGWCELL
Trigger: CAAAAGTTCACACCATCCCACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCGAGAGCCTGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp TTTTCCAGAAAGTCTCATCCTTGGCTGGATGGGTTTCCGTATTGGTaGCTGGTAGACTACACAGCTCTCTCCTTATCTGAGCTGGGTCTG +
Preference number: 1 (lower is better)
Translates to: FSRKSHPWLDGFPYW*LVDYTALSLSELGL
Trigger: CAGACCCAGCTCAGATAAGGAGAGAGCTGTGTAGTCTACCAGCCACCAATACGGAAACCCATCCAGCCAAGGATGAGACTTTCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp TCAGGCTCTCGGGACAGAATCCTGATGGATGGCACATCAGTTGGATaGTTGCAATTCCAGAACATGTGGGATGGTGTGAACTTTTGGACA +
Preference number: 1 (lower is better)
Translates to: SGSRDRILMDGTSVG*LQFQNMWDGVNFWT
Trigger: TGTCCAAAAGTTCACACCATCCCACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCGAGAGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp TTCTTTTCCAGAAAGTCTCATCCTTGGCTGGATGGGTTTCCGTATTaGTGGCTGGTAGACTACACAGCTCTCTCCTTATCTGAGCTGGGT +
Preference number: 1 (lower is better)
Translates to: FFSRKSHPWLDGFPY*WLVDYTALSLSELG
Trigger: ACCCAGCTCAGATAAGGAGAGAGCTGTGTAGTCTACCAGCCACCAATACGGAAACCCATCCAGCCAAGGATGAGACTTTCTGGAAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 90 bp GGCACAGGATCTTCCTGTGAGAATTGCCCCAAATCAGAGTCTTGCTaGAGGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAAC +
Preference number: 1 (lower is better)
Translates to: GTGSSCENCPKSESC*RNCFSSFTLSITSN
Trigger: GTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 90 bp TGGTCATTTAAAAGTGTTAGCACCTCCCCTTTCCTTTGTTCCTCCTaGTCATACCATGTAAGATGCCTGCTCCCACTTTGCTTTCCACCA +
Preference number: 1 (lower is better)
Translates to: WSFKSVSTSPFLCSS*SYHVRCLLPLCFPP
Trigger: TGGTGGAAAGCAAAGTGGGAGCAGGCATCTTACATGGTATGAGCAGGAGGAACAAAGGAAAGGGGAGGTGCTAACACTTTTAAATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR GCA 90 bp CTTAACCTTCCTGCCCATGAGATTCTTCTGGAAGAGGCTCTTTCTTaGTCTGCTCTTTCTTTTCCAGAAAGTCTCATCCTTGGCTGGATG +
Preference number: 1 (lower is better)
Translates to: LNLPAHEILLEEALS*SALSFPESLILGWM
Trigger: CATCCAGCCAAGGATGAGACTTTCTGGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGGCAGGAAGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR TCA 90 bp TTTCTGTTCTCTTGTGACAAGATAGCCTTAACTTTCCCCTCAGCTTaGCCAAATAGGTTTCTTCCTGACTTCAGGCCCTTGACCTCCCTT +
Preference number: 1 (lower is better)
Translates to: FLFSCDKIALTFPSA*PNRFLPDFRPLTSL
Trigger: AAGGGAGGTCAAGGGCCTGAAGTCAGGAAGAAACCTATTTGGTCAAGCTGAGGGGAAAGTTAAGGCTATCTTGTCACAAGAGAACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR GCA 90 bp GAAACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTaGATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCT +
Preference number: 1 (lower is better)
Translates to: ETSVQRNEEMCLRSL*MQLVAALGCGFQIA
Trigger: AGCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR GCA 90 bp TCTTCCTGTGAGAATTGCCCCAAATCAGAGTCTTGCTGGAGGAACTaGTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTTGG +
Preference number: 1 (lower is better)
Translates to: SSCENCPKSESCWRN*FSSFTLSITSNTTW
Trigger: CCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 90 bp TCTTGGCCAAAGCCCAGACTGAAGAGGACATCTTCTGCATCTTCTTaGACTTTGTCCAGAATTTCTGAGATGCTTGAACTAGTCTTGTTG +
Preference number: 1 (lower is better)
Translates to: SWPKPRLKRTSSASS*TLSRISEMLELVLL
Trigger: CAACAAGACTAGTTCAAGCATCTCAGAAATTCTGGACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTCAGTCTGGGCTTTGGCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
3UTR-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGGTGGTGGGGGTGCCTaGGTCTGCTGGGCCAGCGAC +
Preference number: 2 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEGGGGA*VCWASD
Trigger: GTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACC...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR TCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGCTGGGCCAGCGACTCTaGCTCTGCTCCTCCTCACTG +
Preference number: 2 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLELGQRL*LCSSSL
Trigger: CAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAG...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR TCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTCCAGCAAAAGTCTGGTaGTGGTGGGGGTGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFPAKVW*WWGCLG
Trigger: ACCCAGGCACCCCCACCACCACCAGACTTTTGCTGG...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR TCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR TCA 90 bp TGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: CVQQGTLGFESRVWDGASVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...GCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR GCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTCCTCCCCATGTACCATaGTGCCTTTCTCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFPPHVP*CLSPAE
Trigger: CTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGG...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCACCAAATCGCTCAGTCTaGTCTTCCTCCCCATGTACC +
Preference number: 2 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPPNRSV*SSSPCT
Trigger: GGTACATGGGGAGGAAGACCAGACTGAGCGATTTGG...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR GCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGAGGGATGAACAGAGGTaGAGAGGGAATCCTAGTGTG +
Preference number: 2 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLERDEQR*RGNPSV
Trigger: CACACTAGGATTCCCTCTGCACCTCTGTTCATCCCT...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR CCA 90 bp AGCTGGCAAGGCCTGGCTGTCTCGAGGAAACTCCTGGAGAAGAGTTTGCCATTGAGTCATCTTCAAAGCTaGTCCCATGGCTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: SWQGLAVSRKLLEKSLPLSHLQS*SHGCRS
Trigger: GCTTCTGCAGCCATGGGACCAGCTTTGAAGATGACT...CAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
3UTR CAA 90 bp CACTGTGGATCTTCTATGGGCAGAGAATGTGTGCAACAGGGTACCTaGGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCACTGTGGAC +
Preference number: 2 (lower is better)
Translates to: HCGSSMGRECVQQGT*GFESRVWDGASTVD
Trigger: GTCCACAGTGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR GCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGTTCTGTCAGACCACATaGTGTTGTGGTGGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEFCQTT*CCGGGE
Trigger: TTCTCCACCACCACAACAGCATGTGGTCTGACAGAA...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp TGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAACCAAGGAGTAGGGGCTaGATGTTGAGGGCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: CLRSLCMQLVAALGCGFQPRSRG*MLRAVQ
Trigger: CTGCACTGCCCTCAACATCCAGCCCCTACTCCTTGG...TTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp TGCTGCTGGAAGCCAAACTACAGCCAAGATCAAGTAGCTGGCAAGGCCTGGCTGTCTCGAGGAAACTCCTaGAGAAGAGTTTGCCATTGG +
Preference number: 2 (lower is better)
Translates to: CCWKPNYSQDQVAGKAWLSRGNS*RRVCHW
Trigger: CCAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGA...CAGCCAGGCCTTGCCAGCTACTTGATCTTGGCTGTAGTTTGGCTTCCAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
3UTR-3UTR TCA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR GCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTCTGAAGTCTCCTAACTaGCCTTGGCAATGTCAAAGC +
Preference number: 2 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFLKSPN*PWQCQS
Trigger: GCTTTGACATTGCCAAGGGCAGTTAGGAGACTTCAG...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
3UTR-3UTR GCA 90 bp CTCCTCACTGTTGCTTTGCACCTCCTCCAAGTCAAAAGTGTCCTGTGGCTGCTGCCCAAATCAGAGTCTTaGTGGAGGAACTGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LLTVALHLLQVKSVLWLLPKSES*WRNCFS
Trigger: AGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGG...CAGCAGCCACAGGACACTTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR GCA 90 bp TCCTGTGGCTGCTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGCTCTTCCTGTGAGAATTaGCCCAAATCAGAGTCTTGC +
Preference number: 2 (lower is better)
Translates to: SCGCWLKDRRSSGLSTLCSSCEN*PKSESC
Trigger: GCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGA...GCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR CCA 90 bp TGGTGGTGGCCGGTCTCGGGGGCATGTGTACAGACACATCTTGGAGATGGCTTTGATGGTGTGAACTTTTaGACAGGTGTCTTAGACACA +
Preference number: 2 (lower is better)
Translates to: WWWPVSGACVQTHLGDGFDGVNF*TGVLDT
Trigger: TGTGTCTAAGACACCTGTCCAAAAGTTCACACCATC...AAAGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR CCA 90 bp GAGAAAGCTTCACGAGTCTTTGCCAGCAAAAGTCTGGTGGTGGTGGGGGTGCCTGGATGGCACATCAGTTaGATGGTTGCAATTCCAGAA +
Preference number: 2 (lower is better)
Translates to: EKASRVFASKSLVVVGVPGWHIS*MVAIPE
Trigger: TTCTGGAATTGCAACCATCCAACTGATGTGCCATCC...AGGCACCCCCACCACCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CAA 90 bp GGCTCTCGGGACAGAATCCTGATGGATGGCACATCAGTTGGATGGTaGCAATTCCAGAACATGTGGGATGGTGTGAACTTTTGGACAGGT +
Preference number: 2 (lower is better)
Translates to: GSRDRILMDGTSVGW*QFQNMWDGVNFWTG
Trigger: ACCTGTCCAAAAGTTCACACCATCCCACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR GCA 90 bp GCCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTTTCTGTCAGACCACATaGTGTTGTGGTGGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: ALLSLPHYVSDSVCAFSPFCQTT*CCGGGE
Trigger: TTCTCCACCACCACAACAGCATGTGGTCTGACAGAA...AGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR GCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTTCTGTCAGACCACATaGTGTTGTGGTGGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSFCQTT*CCGGGE
Trigger: TTCTCCACCACCACAACAGCATGTGGTCTGACAGAA...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR GCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCCTCCCCATGTACCATaGTGCCTTTCTCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNPPHVP*CLSPAE
Trigger: CTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGG...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp CTCCTCACTGTTGCTTTGCACCTCCTCCAAGTCAAAAGTGTCCTGTGGCTGCTGCAGAATCCTGATGGATaGCACATCAGTTGGATGGTT +
Preference number: 2 (lower is better)
Translates to: LLTVALHLLQVKSVLWLLQNPDG*HISWMV
Trigger: AACCATCCAACTGATGTGCCATCCATCAGGATTCTG...CAGCAGCCACAGGACACTTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CAA 90 bp GAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTaGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: EGSAVSCKRWLLVSS*KPILSDHMLLWWWR
Trigger: TCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR TCA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGAGAAGGCATCAGCAGTaGCAGCCAGTGTTTGCACCT +
Preference number: 2 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLRRHQQ*QPVFAP
Trigger: AGGTGCAAACACTGGCTGTCACTGCTGATGCCTTCT...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR GCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCAATGCTGCCTTTCTCCTaGAGAGTTTGGGGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAAMLPFS*RVWGFG
Trigger: TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR GCA 90 bp GGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTTGGTCCACCTCCCCATGTACCATaGTGCCTTTCTCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: GTASLLSLCPSLPTQLGPPPHVP*CLSPAE
Trigger: CTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGG...TGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR GCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGAGAAATGAAGAGATGTaGCTAAGGTCTTTGTGCATG +
Preference number: 2 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLERNEEM*LRSLCM
Trigger: CATGCACAAAGACCTTAGGCACATCTCTTCATTTCT...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCACCCCATTGTTGGAGGTaGGGCCTGGTGGGTGGTGAT +
Preference number: 2 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKAPHCWR*GLVGGD
Trigger: ATCACCACCCACCAGGCCCCACCTCCAACAATGGGG...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR GCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTCTGTCAGACCACATaGTGTTGTGGTGGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAAFCQTT*CCGGGE
Trigger: TTCTCCACCACCACAACAGCATGTGGTCTGACAGAA...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKEVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTTTCTCCTGCAGAGTTTaGGGGTTTGGAGGACCAAGG +
Preference number: 2 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLFSCRV*GFGGPR
Trigger: CCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CCA 90 bp GCATCTTCTTGCACTTTGTCCAGAATTTCTGAGATGCTTGAACTAGTCTTGTTGGTAGCTGGCAAGGCCTaGCTGTCTCGAGGAAACTCC +
Preference number: 2 (lower is better)
Translates to: ASSCTLSRISEMLELVLLVAGKA*LSRGNS
Trigger: GGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTAC...CAACAAGACTAGTTCAAGCATCTCAGAAATTCTGGACAAAGTGCAAGAAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
3UTR-3UTR CCA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCTTCTCCTGCAGAGTTTaGGGGTTTGGAGGACCAAGG +
Preference number: 2 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPFSCRV*GFGGPR
Trigger: CCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR CCA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCCCAAATCGCTCAGTCTaGTCTTCCTCCCCATGTACC +
Preference number: 2 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPPNRSV*SSSPCT
Trigger: GGTACATGGGGAGGAAGACCAGACTGAGCGATTTGG...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR CCA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCATGTAATCCCCATTGTTaGAGGTGGGGCCTGGTGGGT +
Preference number: 2 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKACNPHC*RWGLVG
Trigger: ACCCACCAGGCCCCACCTCCAACAATGGGGATTACA...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR CAA 90 bp AGTTGGATGGTTGCAATTCCAGAACATGTGGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACACATAGGAGTAGAGACAGAAGAAGGC +
Preference number: 2 (lower is better)
Translates to: SWMVAIPEHVGWCEL*DRCLRHIGVETEEG
Trigger: GCCTTCTTCTGTCTCTACTCCTATGTGTCTAAGACACCTGTCCAAAAGTTCACACCATCCCACATGTTCTGGAATTGCAACCATCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR GCA 90 bp GCATCTTCTTGCACTTTGTCCAGAATTTCTGAGATGCTTGAACTAGTCTTGTTGTCCTGGAGAAGAGTTTaGCATTGGCGGCCAGTAGTG +
Preference number: 2 (lower is better)
Translates to: ASSCTLSRISEMLELVLLSWRRV*HWRPVV
Trigger: CACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGA...CAACAAGACTAGTTCAAGCATCTCAGAAATTCTGGACAAAGTGCAAGAAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
3UTR CAA 90 bp CCCAAATCAGAGTCTTGCTGGAGGAACTGCTTCTCTTCTTTCACTTaGTCCATCACTTCCAACACAACTTGGTCCAAACTGTTCCTTTTG +
Preference number: 2 (lower is better)
Translates to: PKSESCWRNCFSSFT*SITSNTTWSKLFLL
Trigger: CAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR GCA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTAGAAATGAAGAGATGTaGCTAAGGTCTTTGTGCATG +
Preference number: 2 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFRNEEM*LRSLCM
Trigger: CATGCACAAAGACCTTAGGCACATCTCTTCATTTCT...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR GCA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCTCTGAAACCACATACTaGCTAAGAGAGCACTGCATG +
Preference number: 2 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPSETTY*LREHCM
Trigger: CATGCAGTGCTCTCTTAGGCAGTATGTGGTTTCAGA...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR CAA 90 bp ATTAGTAAACACAGATGGTTTAAAAATTTTTCCACCCTAGCCCTTTaGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: ISKHRWFKNFSTLAL*SLPHYVSDSVCAFS
Trigger: GGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGGCTAGGGTGGAAAAATTTTTAAACCATCTGTGTTTACTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR CCA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCAGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR TCA 72 bp TGGTGGGGGTGCCTGGGTCTGCTGGGCCAGCGACTCTaGCTCTGCTCCTCCTCACTGTTGCTTTGCACCTCC +
Preference number: 3 (lower is better)
Translates to: WWGCLGLLGQRL*LCSSSLLLCTS
Trigger: GGAGGTGCAAAGCAACAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 72 bp GGTCTCGGGGGCATGTGTACAGACACATCTTGGAGATaGCTTTCCGAAGGCGGTCTCTGGGTGACTGGGGTT +
Preference number: 3 (lower is better)
Translates to: GLGGMCTDTSWR*LSEGGLWVTGV
Trigger: AACCCCAGTCACCCAGAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp TGCTGTTGTGGTGGTGGAGAAAGCTTCACGAGTCTTTaGCAGCAAAAGTCTGGTGGTGGTGGGGGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: CCCGGGESFTSL*QQKSGGGGGAW
Trigger: CCAGGCACCCCCACCACCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCTTTCTCCACCACCACAACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 72 bp TTGGAGATGGCTTTCCGAAGGCGGTCTCTGGGTGACTaGGGTTCAGGCTCTCGGGACAGAATCCTGATGGAT +
Preference number: 3 (lower is better)
Translates to: LEMAFRRRSLGD*GSGSRDRILMD
Trigger: ATCCATCAGGATTCTGTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGAAAGCCATCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp ATCGCTCAGTCTGGTCTTCCTCCCCATGTACCATGCTaGCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGAC +
Preference number: 3 (lower is better)
Translates to: IAQSGLPPHVPC*LSPAEFGGLED
Trigger: GTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCAGACTGAGCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR GCA 72 bp CCCTCAGCAGGGGGCACAGGATCTTCCTGTGAGAATTaGCCCAAATCAGAGTCTTGCTGGAGGAACTGCTTC +
Preference number: 3 (lower is better)
Translates to: PSAGGTGSSCEN*PKSESCWRNCF
Trigger: GAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCCTGCTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 72 bp AGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTaGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGT +
Preference number: 3 (lower is better)
Translates to: RVWGFGGPRSRG*MLRAVQFPARG
Trigger: ACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR CCA 72 bp CTGCTGGAAGCCAAACTACAGCCAAGATCAAGTAGCTaGCAAGGCCTGGCTGTCTCGAGGAAACTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: LLEAKLQPRSSS*QGLAVSRKLLE
Trigger: CTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGGCTGTAGTTTGGCTTCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
3UTR TCA 72 bp TGGGTGACTGGGGTTCAGGCTCTCGGGACAGAATCCTaGTGGATGGCACATCAGTTGGATGGTTGCAATTCC +
Preference number: 3 (lower is better)
Translates to: WVTGVQALGTES*WMAHQLDGCNS
Trigger: GGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCGAGAGCCTGAACCCCAGTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp CAAATCGCTCAGTCTGGTCTTCCTCCCCATGTACCATaGTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAG +
Preference number: 3 (lower is better)
Translates to: QIAQSGLPPHVP*CLSPAEFGGLE
Trigger: CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCAGACTGAGCGATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR-3UTR CAA 90 bp CTCCTCACTGTTGCTTTGCACCTCCTCCAAGTCAAAAGTGTCCTGTGGCTGCTGTTTCTCCTGCAGAGTTaGGGGGTTTGGAGGACCAAG +
Preference number: 3 (lower is better)
Translates to: LLTVALHLLQVKSVLWLLFLLQS*GVWRTK
Trigger: CTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAA...CAGCAGCCACAGGACACTTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR CAA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACAC +
Preference number: 3 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGGWCEL*DRCLRH
Trigger: GTGTCTAAGACACCTGTCCAAAAGTTCACACCATCC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR CAA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAAGCTTCACGAGTCTTaGCCAGCAAAAGTCTGGTGG +
Preference number: 3 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPKLHES*PAKVWW
Trigger: CCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCTT...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR TCA 72 bp CTTCTTACCCTCAGCAGGGGGCACAGGATCTTCCTGTaGGAATTGCCCCAAATCAGAGTCTTGCTGGAGGAA +
Preference number: 3 (lower is better)
Translates to: LLTLSRGHRIFL*ELPQIRVLLEE
Trigger: TTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCCTGCTGAGGGTAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp CTTTGCACCTCCTCCAAGTCAAAAGTGTCCTGTGGCTaGTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCT +
Preference number: 3 (lower is better)
Translates to: LCTSSKSKVSCG*WLKDRRSSGLS
Trigger: AGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTTTGACTTGGAGGAGGTGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 72 bp GGCAGCATTAGGATGTGGATTCCAAATCGCTCAGTCTaGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCC +
Preference number: 3 (lower is better)
Translates to: GSIRMWIPNRSV*SSSPCTMLPFS
Trigger: GGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCAGACTGAGCGATTTGGAATCCACATCCTAATGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
3UTR CCA 72 bp CCAAACTACAGCCAAGATCAAGTAGCTGGCAAGGCCTaGCTGTCTCGAGGAAACTCCTGGAGAAGAGTTTGC +
Preference number: 3 (lower is better)
Translates to: PNYSQDQVAGKA*LSRGNSWRRVC
Trigger: GCAAACTCTTCTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGGCTGTAGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
3UTR CCA 72 bp CTCTCTCCTTATCTGAGCTGGGTCTGTGCTCCACTGTaGATCTTCTATGGGCAGAGAATGTGTGCAACAGGG +
Preference number: 3 (lower is better)
Translates to: LSPYLSWVCAPL*IFYGQRMCATG
Trigger: CCCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR CAA 90 bp GCCAGCGACTCTGACTCTGCTCCTCCTCACTGTTGCTTTGCACCTCCTCCAAGTACTTGTCCCCTAAACTaGATCCTGAAGTCTCCTAAC +
Preference number: 3 (lower is better)
Translates to: ASDSDSAPPHCCFAPPPSTCPLN*ILKSPN
Trigger: GTTAGGAGACTTCAGGATCAAGTTTAGGGGACAAGT...ACTTGGAGGAGGTGCAAAGCAACAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR CAA 90 bp CTCCTCACTGTTGCTTTGCACCTCCTCCAAGTCAAAAGTGTCCTGTGGCTGCTGGGAAGAGGCTCTTTCTaGCTCTGCTCTTTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: LLTVALHLLQVKSVLWLLGRGSF*LCSFFS
Trigger: GGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCC...CAGCAGCCACAGGACACTTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp GACTACACAGCTCTCTCCTTATCTGAGCTGGGTCTGTaGTCCACTGTGGATCTTCTATGGGCAGAGAATGTG +
Preference number: 3 (lower is better)
Translates to: DYTALSLSELGL*STVDLLWAENV
Trigger: CACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAGAGCTGTGTAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp CGCAGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTaGTGGGTGATGGACAGGTCCAAGGACTTAACCTTC +
Preference number: 3 (lower is better)
Translates to: RSSGLSTLCFHF*WVMDRSKDLTF
Trigger: GAAGGTTAAGTCCTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp CTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTaGTTCCATTTCTGCTGGGTGATGGACAGGTCCAAG +
Preference number: 3 (lower is better)
Translates to: LKDRRSSGLSTL*FHFCWVMDRSK
Trigger: CTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 72 bp ATACATGCAGGTCACAGGGGATATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAGTTTGGATCTGTGTCCT +
Preference number: 3 (lower is better)
Translates to: IHAGHRGYDGLA*AQRPDSLDLCP
Trigger: AGGACACAGATCCAAACTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR CCA 72 bp CTTCTATGGGCAGAGAATGTGTGCAACAGGGTACCTTaGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCA +
Preference number: 3 (lower is better)
Translates to: LLWAENVCNRVP*GSNPEFGMVLA
Trigger: TGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR CAA 90 bp CCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTAATGTGCCTAAGGTCTTaGTGCATGCAGCTTGTGGCA +
Preference number: 3 (lower is better)
Translates to: PFCLCLTTYQTQFVPSPLMCLRS*CMQLVA
Trigger: TGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT...TAGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR CAA 90 bp TCTATGGGCAGAGAATGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTGTGTACAGACACATCTaGGAGATGGCTTTCCGAAGG +
Preference number: 3 (lower is better)
Translates to: SMGRECVQQGTLGFESRVVYRHI*EMAFRR
Trigger: CCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACAC...AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR CAA 90 bp CAAGGACTTAACCTTCCTGCCCATGAGATTCTTCTGGAAGAGGCTCTTTCTTGCCCCCAAATCAGAGTCTaGCTGGAGGAACTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: QGLNLPAHEILLEEALSCPQIRV*LEELLL
Trigger: GAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGG...GCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGGCAGGAAGGTTAAGTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp TGCTCCACTGTGGATCTTCTATGGGCAGAGAATGTGTaGAACAGGGTACCTTGGGGTTCGAATCCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: CSTVDLLWAENV*NRVPWGSNPEF
Trigger: AAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 72 bp CGGGACAGAATCCTGATGGATGGCACATCAGTTGGATaGTTGCAATTCCAGAACATGTGGGATGGTGTGAAC +
Preference number: 3 (lower is better)
Translates to: RDRILMDGTSVG*LQFQNMWDGVN
Trigger: GTTCACACCATCCCACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 72 bp CTCTCGGGACAGAATCCTGATGGATGGCACATCAGTTaGATGGTTGCAATTCCAGAACATGTGGGATGGTGT +
Preference number: 3 (lower is better)
Translates to: LSGQNPDGWHIS*MVAIPEHVGWC
Trigger: ACACCATCCCACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 72 bp AAGTCTCATCCTTGGCTGGATGGGTTTCCGTATTGGTaGCTGGTAGACTACACAGCTCTCTCCTTATCTGAG +
Preference number: 3 (lower is better)
Translates to: KSHPWLDGFPYW*LVDYTALSLSE
Trigger: CTCAGATAAGGAGAGAGCTGTGTAGTCTACCAGCCACCAATACGGAAACCCATCCAGCCAAGGATGAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CCA 72 bp AGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTGCTaGGTGATGGACAGGTCCAAGGACTTAACCTTCCTG +
Preference number: 3 (lower is better)
Translates to: SSGLSTLCFHFC*VMDRSKDLTFL
Trigger: CAGGAAGGTTAAGTCCTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR-3UTR CAA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTTTTCTCCTGCAGAGTTaGGGGGTTTGGAGGACCAAG +
Preference number: 3 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFFLLQS*GVWRTK
Trigger: CTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAA...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR CAA 90 bp TTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAGCTTCACCTCCTCACTGTTGCTTaGCACCTCCTCCAAGTCAAA +
Preference number: 3 (lower is better)
Translates to: LKPILSDHMLLWWWRKLHLLTVA*HLLQVK
Trigger: TTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG...GTGAAGCTTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp GGAGAAATGTGTCCAAGATGCTCTGAAACCACATACTaGCTAAGAGAGCACTGCATGTGCTCAAGCCCTGTT +
Preference number: 3 (lower is better)
Translates to: GEMCPRCSETTY*LREHCMCSSPV
Trigger: AACAGGGCTTGAGCACATGCAGTGCTCTCTTAGGCAGTATGTGGTTTCAGAGCATCTTGGACACATTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR GCA 72 bp AAAAGTGTTAGCACCTCCCCTTTCCTTTGTTCCTCCTaGTCATACCATGTAAGATGCCTGCTCCCACTTTGC +
Preference number: 3 (lower is better)
Translates to: KSVSTSPFLCSS*SYHVRCLLPLC
Trigger: GCAAAGTGGGAGCAGGCATCTTACATGGTATGAGCAGGAGGAACAAAGGAAAGGGGAGGTGCTAACACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR CAA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCAGTAGGGGCTGGATGTaGAGGGCAGTGCAGTTTCCT +
Preference number: 3 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPSRGWM*RAVQFP
Trigger: AGGAAACTGCACTGCCCTCAACATCCAGCCCCTACT...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR-3UTR CAA 90 bp TTGCCCCAAATCAGAGTCTTGCTGGAGGAACTGCTTCTCTTCTTTCACTTTGTCACATCAGTTGGATGGTaGCAATTCCAGAACATGTGG +
Preference number: 3 (lower is better)
Translates to: LPQIRVLLEELLLFFHFVTSVGW*QFQNMW
Trigger: CCACATGTTCTGGAATTGCAACCATCCAACTGATGT...GACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR TCA 72 bp TCTTGTGACAAGATAGCCTTAACTTTCCCCTCAGCTTaGCCAAATAGGTTTCTTCCTGACTTCAGGCCCTTG +
Preference number: 3 (lower is better)
Translates to: SCDKIALTFPSA*PNRFLPDFRPL
Trigger: CAAGGGCCTGAAGTCAGGAAGAAACCTATTTGGTCAAGCTGAGGGGAAAGTTAAGGCTATCTTGTCACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR TCA 72 bp AAGTGTCTTTGTGATCCTCTTGGCCAAAGCCCAGACTaGAGAGGACATCTTCTGCATCTTCTTGCACTTTGT +
Preference number: 3 (lower is better)
Translates to: KCLCDPLGQSPD*RGHLLHLLALC
Trigger: ACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
3UTR GCA 72 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTaGATGCAGCTTGTGGCAGCATTAGGATGTGGATTC +
Preference number: 3 (lower is better)
Translates to: VQRNEEMCLRSL*MQLVAALGCGF
Trigger: GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
3UTR CCA 72 bp TCCAAGGACTTAACCTTCCTGCCCATGAGATTCTTCTaGAAGAGGCTCTTTCTTGCTCTGCTCTTTCTTTTC +
Preference number: 3 (lower is better)
Translates to: SKDLTFLPMRFF*KRLFLALLFLF
Trigger: GAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGGCAGGAAGGTTAAGTCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR GCA 72 bp CCCATGGCTGCAGAAGCCATTGTAGATAAACTGTCCTaGTTCCTCAGAAAATCCTTCTTCAGAGTATCTAAA +
Preference number: 3 (lower is better)
Translates to: PMAAEAIVDKLS*FLRKSFFRVSK
Trigger: TTTAGATACTCTGAAGAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTACAATGGCTTCTGCAGCCATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CCA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCGGGGGTGTTGTGGGGTaGTGGTGGCCGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGGGVVG*WWPVSG
Trigger: CCCCGAGACCGGCCACCACCACCCCACAACACCCCC...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGGGGGTGCCTGGGTCTaGTGGGCCAGCGACTCTGAC +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRGGAWV*WASDSD
Trigger: GTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCC...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCGGGGGTGCCTGGGTCTaGTGGGCCAGCGACTCTGAC +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTGGAWV*WASDSD
Trigger: GTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCC...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTCCGCTCCCAGGGTCAAGTCATCTTCAAAGCTGGTCCCATGGCTGCAGAAGCCTGGCGGCCAGTAGTGTaGCCTCCGCTCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LRSQGQVIFKAGPMAAEAWRPVV*PPLPGS
Trigger: TGACCCTGGGAGCGGAGGCCACACTACTGGCCGCCA...GGCTTCTGCAGCCATGGGACCAGCTTTGAAGATGACTTGACCCTGGGAGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CCA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCGGTGTTGTGGGGTGGTaGTGGCCGGTCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGGVVGW*WPVSGA
Trigger: TGCCCCCGAGACCGGCCACCACCACCCCACAACACC...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGGGGGTGTTGTGGGGTaGTGGTGGCCGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEGGVVG*WWPVSG
Trigger: CCCCGAGACCGGCCACCACCACCCCACAACACCCCC...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTGGGGGTGTTGTGGGGTaGTGGTGGCCGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFGGVVG*WWPVSG
Trigger: CCCCGAGACCGGCCACCACCACCCCACAACACCCCC...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGGGGTGTTGTGGGGTaGTGGTGGCCGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRGGVVG*WWPVSG
Trigger: CCCCGAGACCGGCCACCACCACCCCACAACACCCCC...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGTGCCAGTTACGGCTCTaGCGGAGCCAGGCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRCQLRL*RSQARR
Trigger: ACGGCGGGCCTGGCTCCGTCAGAGCCGTAACTGGCA...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316577.12
ENST00000449076.6
CDS-3UTR GCA 90 bp AGCTGGCAAGGCCTGGCTGTCTCGAGGAAACTCCTGGAGAAGAGTTTGCCATTGGGATCTGGGACATCCTaGAGGGCGGCGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SWQGLAVSRKLLEKSLPLGSGTS*RAAAAS
Trigger: GGAGGCTGCCGCCGCCCTGCAGGATGTCCCAGATCC...CAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGTGGCGGCCAGTAGTGTaGCCTCCGCTCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRWRPVV*PPLPGS
Trigger: TGACCCTGGGAGCGGAGGCCACACTACTGGCCGCCA...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCATGGCGGCCAGTAGTGTaGCCTCCGCTCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAWRPVV*PPLPGS
Trigger: TGACCCTGGGAGCGGAGGCCACACTACTGGCCGCCA...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGTTGTGGGGTGGTGGTaGCCGGTCTCGGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAVVGWW*PVSGAC
Trigger: ACATGCCCCCGAGACCGGCCACCACCACCCCACAAC...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGTTGTGGGGTGGTGGTaGCCGGTCTCGGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGVVGWW*PVSGAC
Trigger: ACATGCCCCCGAGACCGGCCACCACCACCCCACAAC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGGGTGGTGGGGGTGCCTaGGTCTGCTGGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKEGGGGA*VCWASD
Trigger: GTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACC...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGTGGTGGGGGTGCCTaGGTCTGCTGGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGGGGGA*VCWASD
Trigger: GTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACC...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCACTGGGTGGTGGGGGTGCCTaGGTCTGCTGGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: CNRVPWGSNPEFGMVLALGGGGA*VCWASD
Trigger: GTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACC...CAGTGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CAA 72 bp GGTGGCCGGTCTCGGGGGCATGTGTACAGACACATCTaGGAGATGGCTTTCCGAAGGCGGTCTCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GGRSRGHVYRHI*EMAFRRRSLGD
Trigger: GTCACCCAGAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAAAGGCGGTCTCTGGGTaGCTGGGGTTCAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAKAVSG*LGFRLS
Trigger: CGAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTT...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGCTGGGCCAGCGACTCTaGCTCTGCTCCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRLGQRL*LCSSSL
Trigger: CAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAG...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGTGGCGGCCAGTAGTGTaGCCTCCGCTCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEWRPVV*PPLPGS
Trigger: TGACCCTGGGAGCGGAGGCCACACTACTGGCCGCCA...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCCGGTCTCTGGGTGACTaGGGTTCAGGCTCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGRSLGD*GSGSRD
Trigger: GTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCG...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CCCTCAGCAGGGGGCACAGGATCTTCCTGTGAGAATTGCCCCAAATCAGAGTCTGTTGTGGGGTGGTGGTaGCCGGTCTCGGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: PSAGGTGSSCENCPKSESVVGWW*PVSGAC
Trigger: ACATGCCCCCGAGACCGGCCACCACCACCCCACAAC...AGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCCTGCTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGGTGCCTGGGTCTGCTaGGCCAGCGACTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGGAWVC*ASDSDS
Trigger: AGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp GCCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTTGCCAGTTACGGCTCTaGCGGAGCCAGGCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: ALLSLPHYVSDSVCAFSPCQLRL*RSQARR
Trigger: ACGGCGGGCCTGGCTCCGTCAGAGCCGTAACTGGCA...AGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR TCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAAGGCGGTCTCTGGGTaGCTGGGGTTCAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLKAVSG*LGFRLS
Trigger: CGAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTCTGGGCCAGCGACTCTaGCTCTGCTCCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFLGQRL*LCSSSL
Trigger: CAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAG...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GCCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTGGATCTGGGACATCCTaGAGGGCGGCGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ALLSLPHYVSDSVCAFSPGSGTS*RAAAAS
Trigger: GGAGGCTGCCGCCGCCCTGCAGGATGTCCCAGATCC...AGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR GCA 90 bp GGTGGTGGTGGCCGGTCTCGGGGGCATGTGTACAGACACATCTTGGAGATGGCTAGAGCTGGAAATCAATaGCCTTGGCCTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GGGGRSRGHVYRHILEMARAGNQ*PWPERG
Trigger: CCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCT...AGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACCACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGTGGGGGTCACAAGGTaGTCAGTGGGGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRVGVTR*SVGELL
Trigger: CAGAAGCTCCCCCACTGAGCACCTTGTGACCCCCAC...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAGGGGGTGTTGTGGGGTaGTGGTGGCCGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPGGVVG*WWPVSG
Trigger: CCCCGAGACCGGCCACCACCACCCCACAACACCCCC...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTGGTGCCTGGGTCTGCTaGGCCAGCGACTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFGAWVC*ASDSDS
Trigger: AGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACC...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAGGTGGTGGGGGTGCCTaGGTCTGCTGGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGGGGGA*VCWASD
Trigger: GTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACC...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp CAGGGTCAAGTCATCTTCAAAGCTGGTCCCATGGCTGCAGAAGCCATTGTAGATTGCCAGTTACGGCTCTaGCGGAGCCAGGCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: QGQVIFKAGPMAAEAIVDCQLRL*RSQARR
Trigger: ACGGCGGGCCTGGCTCCGTCAGAGCCGTAACTGGCA...ATCTACAATGGCTTCTGCAGCCATGGGACCAGCTTTGAAGATGACTTGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR TCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGCCTGAGAGGGGGTGGTaGAAAATCGGGCGGGTATCC +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRPERGW*KIGRVS
Trigger: GGATACCCGCCCGATTTTTCACCACCCCCTCTCAGG...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTACCTGCTGGCCAGCATaGGGCAGGGGTCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGATCWPA*GRGLPF
Trigger: AAATGGAAGACCCCTGCCTCATGCTGGCCAGCAGGT...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR TCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGTGGGGGTCACAAGGTaGTCAGTGGGGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRVGVTR*SVGELL
Trigger: CAGAAGCTCCCCCACTGAGCACCTTGTGACCCCCAC...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGTAGCTGGCAAGGCCTaGCTGTCTCGAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGVAGKA*LSRGNS
Trigger: GGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTAC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCGTAGCTGGCAAGGCCTaGCTGTCTCGAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTVAGKA*LSRGNS
Trigger: GGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTAC...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGGCCTCCGCTCCCAGGGTCAAGTCATCTTCAAAGCTGGTCCCATGGCTGCAGACCAAGATCAAGTAGCTaGCAAGGCCTGGCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: WPPLPGSSHLQSWSHGCRPRSSS*QGLAVS
Trigger: CGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGG...TCTGCAGCCATGGGACCAGCTTTGAAGATGACTTGACCCTGGGAGCGGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGACGGTCTCTGGGTGACTaGGGTTCAGGCTCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGRSLGD*GSGSRD
Trigger: GTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCG...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGTCCGAAGGCGGTCTCTaGGTGACTGGGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRSEGGL*VTGVQA
Trigger: AGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGA...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAGGTGTTGTGGGGTGGTaGTGGCCGGTCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPGVVGW*WPVSGA
Trigger: TGCCCCCGAGACCGGCCACCACCACCCCACAACACC...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGGGTGCCTGGGTCTGCTaGGCCAGCGACTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKEGAWVC*ASDSDS
Trigger: AGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACC...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTGGTGGTGGGGGTGCCTaGGTCTGCTGGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSGGGGA*VCWASD
Trigger: GTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACC...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGCCAGCAAAAGTCTGGTaGTGGTGGGGGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEPAKVW*WWGCLG
Trigger: ACCCAGGCACCCCCACCACCACCAGACTTTTGCTGG...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTCCAGCAAAAGTCTGGTaGTGGTGGGGGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFPAKVW*WWGCLG
Trigger: ACCCAGGCACCCCCACCACCACCAGACTTTTGCTGG...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCACCAGCAAAAGTCTGGTaGTGGTGGGGGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPPAKVW*WWGCLG
Trigger: ACCCAGGCACCCCCACCACCACCAGACTTTTGCTGG...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTCCCCATTGTTGGAGGTaGGGCCTGGTGGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFPHCWR*GLVGGD
Trigger: ATCACCACCCACCAGGCCCCACCTCCAACAATGGGG...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTCCTGAGAGGGGGTGGTaGAAAATCGGGCGGGTATCC +
Preference number: 4 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFPERGW*KIGRVS
Trigger: GGATACCCGCCCGATTTTTCACCACCCCCTCTCAGG...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp TGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCCCTGAGAGGGGGTGGTaGAAAATCGGGCGGGTATCC +
Preference number: 4 (lower is better)
Translates to: CVQQGTLGFESRVWDGASPERGW*KIGRVS
Trigger: GGATACCCGCCCGATTTTTCACCACCCCCTCTCAGG...GCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp CAGAGAATGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGCTGGGCCAGCGACTCTaGCTCTGCTCCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: QRMCATGYLGVRIQSLGWLGQRL*LCSSSL
Trigger: CAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAG...CCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGCCAGTGTTTGCACCTaGTTAAACCTGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGASVCT*LNLLAS
Trigger: GCTGGCCAGCAGGTTTAAGCAGGTGCAAACACTGGC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGCCAGTGTTTGCACCTaGTTAAACCTGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAASVCT*LNLLAS
Trigger: GCTGGCCAGCAGGTTTAAGCAGGTGCAAACACTGGC...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCGGGGGTGCCTGGGTCTaGTGGGCCAGCGACTCTGAC +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRGGAWV*WASDSD
Trigger: GTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCC...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGCCTCCCCATGTACCATaGTGCCTTTCTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRPPHVP*CLSPAE
Trigger: CTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGG...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGGCCTCCGCTCCCAGGGTCAAGTCATCTTCAAAGCTGGTCCCATGGCTGCAGAAAACGTCATCCAGGCTaGAAGGCTCAGGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: WPPLPGSSHLQSWSHGCRKRHPG*KAQDLG
Trigger: TCCCAGATCCTGAGCCTTCCAGCCTGGATGACGTTT...TCTGCAGCCATGGGACCAGCTTTGAAGATGACTTGACCCTGGGAGCGGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTCCAAGATCAAGTAGCTaGCAAGGCCTGGCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAPRSSS*QGLAVS
Trigger: CGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGG...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTCGGTCTCTGGGTGACTaGGGTTCAGGCTCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSRSLGD*GSGSRD
Trigger: GTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCG...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTTCCGAAGGCGGTCTCTaGGTGACTGGGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFSEGGL*VTGVQA
Trigger: AGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGA...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGATCCGAAGGCGGTCTCTaGGTGACTGGGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGSEGGL*VTGVQA
Trigger: AGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGA...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCGGTGTTGTGGGGTGGTaGTGGCCGGTCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFGVVGW*WPVSGA
Trigger: TGCCCCCGAGACCGGCCACCACCACCCCACAACACC...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCGGTGTTGTGGGGTGGTaGTGGCCGGTCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRGVVGW*WPVSGA
Trigger: TGCCCCCGAGACCGGCCACCACCACCCCACAACACC...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGTGTCCTGTGGCTGCTaGCTTAAAGACCGACGCAGT +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAVSCGC*LKDRRS
Trigger: ACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACAC...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCGTGTCCTGTGGCTGCTaGCTTAAAGACCGACGCAGT +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTVSCGC*LKDRRS
Trigger: ACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACAC...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGCCAAGGAGTAGGGGCTaGATGTTGAGGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLPRSRG*MLRAVQ
Trigger: CTGCACTGCCCTCAACATCCAGCCCCTACTCCTTGG...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGAGTTCCCCTGTCTCCTaGTTTCTGTGGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGSSPVS*FLWVGR
Trigger: CCTTCCCACCCACAGAAACCAGGAGACAGGGGAACT...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCGGCCAAAGCCCAGACTaGAGAGGACATCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTGQSPD*RGHLLH
Trigger: ATGCAGAAGATGTCCTCTTCAGTCTGGGCTTTGGCC...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGAGAAGGCATCAGCAGTaGCAGCCAGTGTTTGCACCT +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGRRHQQ*QPVFAP
Trigger: AGGTGCAAACACTGGCTGTCACTGCTGATGCCTTCT...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCATTGGGCTCAGAGGCCTaGCAGTTTGGATCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPLGSEA*QFGSVS
Trigger: GGACACAGATCCAAACTGTCAGGCCTCTGAGCCCAA...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGGGATCTGGGACATCCTaGAGGGCGGCGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLGSGTS*RAAAAS
Trigger: GGAGGCTGCCGCCGCCCTGCAGGATGTCCCAGATCC...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316577.12
ENST00000449076.6
CDS-3UTR GCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCTCCTGGAGAAGAGTTTaGCATTGGCGGCCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTSWRRV*HWRPVV
Trigger: CACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGA...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGAGCTGGAAATCAATaGCCTTGGCCTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLRAGNQ*PWPERG
Trigger: CCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCACTCTGCTTCCATTTCTaGTGGGTGATGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRALCFHF*WVMDRS
Trigger: GGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAG...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAAAAGTGTCCTGTGGCTaGTGGCTTAAAGACCGACGC +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAKVSCG*WLKDRR
Trigger: GCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTT...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGAGGGGGTGCCTGGGTCTaGTGGGCCAGCGACTCTGAC +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGGGAWV*WASDSD
Trigger: GTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCC...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTAAACGTCATCCAGGCTaGAAGGCTCAGGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAKRHPG*KAQDLG
Trigger: TCCCAGATCCTGAGCCTTCCAGCCTGGATGACGTTT...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316577.12
ENST00000449076.6
CDS-3UTR CCA 90 bp CAGCTCTCTCCTTATCTGAGCTGGGTCTGTGCTCCACTGTGGATCTTCTATGGGGTAGCTGGCAAGGCCTaGCTGTCTCGAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: QLSPYLSWVCAPLWIFYGVAGKA*LSRGNS
Trigger: GGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTAC...CCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TCAAGTAGCTGGCAAGGCCTGGCTGTCTCGAGGAAACTCCTGGAGAAGAGTTTGGTAGCTGGCAAGGCCTaGCTGTCTCGAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: SSSWQGLAVSRKLLEKSLVAGKA*LSRGNS
Trigger: GGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTAC...CAAACTCTTCTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTCCAAGATCAAGTAGCTaGCAAGGCCTGGCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFPRSSS*QGLAVS
Trigger: CGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGG...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGCCAAGATCAAGTAGCTaGCAAGGCCTGGCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLPRSSS*QGLAVS
Trigger: CGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGG...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGTCAATCCTCCGCACCTaGGACTTCAGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLSILRT*DFRKSW
Trigger: CCAGCTCTTCCTGAAGTCCCAGGTGCGGAGGATTGA...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGACACATCTTGGAGATaGCTTTCCGAAGGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGADTSWR*LSEGGL
Trigger: GAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTC...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGTTGTGGGGTGGTGGTaGCCGGTCTCGGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCVVGWW*PVSGAC
Trigger: ACATGCCCCCGAGACCGGCCACCACCACCCCACAAC...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATCTCCTTATCTGAGCTaGGTCTGTGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGSPYLS*VCAPLW
Trigger: CCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGA...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTGTGTCCTGTGGCTGCTaGCTTAAAGACCGACGCAGT +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFVSCGC*LKDRRS
Trigger: ACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACAC...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CATCACTTCCAACACAACTTGGTCCAAACTGTTCCTTTTGGGGGTGTTGTGGGGGGTGCCTGGGTCTGCTaGGCCAGCGACTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: HHFQHNLVQTVPFGGVVGGAWVC*ASDSDS
Trigger: AGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACC...CCCCACAACACCCCCAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTGATG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCTTCTCCTGCAGAGTTTaGGGGTTTGGAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTFSCRV*GFGGPR
Trigger: CCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCGTCTCCTGGTTTCTGTaGGTGGGAAGGGTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTVSWFL*VGRVGN
Trigger: GTTTCCTACCCTTCCCACCCACAGAAACCAGGAGAC...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTGTAATCCCCATTGTTaGAGGTGGGGCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFCNPHC*RWGLVG
Trigger: ACCCACCAGGCCCCACCTCCAACAATGGGGATTACA...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGTGTAATCCCCATTGTTaGAGGTGGGGCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRCNPHC*RWGLVG
Trigger: ACCCACCAGGCCCCACCTCCAACAATGGGGATTACA...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGAAGGCATCAGCAGTaGCAGCCAGTGTTTGCACCT +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPRRHQQ*QPVFAP
Trigger: AGGTGCAAACACTGGCTGTCACTGCTGATGCCTTCT...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCAAGGCGGTCTCTGGGTaGCTGGGGTTCAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFKAVSG*LGFRLS
Trigger: CGAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTT...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCCTGGGCCAGCGACTCTaGCTCTGCTCCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRLGQRL*LCSSSL
Trigger: CAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAG...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAGTGACAGCCAGTGTTTaGACCTGCTTAAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAVTASV*TCLNLL
Trigger: CAGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCAC...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCATGGGCAGAGAATGTGTaGAACAGGGTACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPWAENV*NRVPWG
Trigger: ACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCA...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTCTGAGCTGGGTCTGTaGTCCACTGTGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGSELGL*STVDLL
Trigger: TAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGA...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGTCTGAGCTGGGTCTGTaGTCCACTGTGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRSELGL*STVDLL
Trigger: TAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGA...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGTCTGTCTACACTCTaGTTCCATTTCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAGLSTL*FHFCWV
Trigger: CACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACC...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAAAGTGTCCTGTGGCTaGTGGCTTAAAGACCGACGC +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLKVSCG*WLKDRR
Trigger: GCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGAAAGTGTCCTGTGGCTaGTGGCTTAAAGACCGACGC +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEKVSCG*WLKDRR
Trigger: GCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTT...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAATGCTGCCTTTCTCCTaGAGAGTTTGGGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGMLPFS*RVWGFG
Trigger: TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGATGCTGCCTTTCTCCTaGAGAGTTTGGGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGMLPFS*RVWGFG
Trigger: TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGCCTAAGAGAGCACTaGATGTGCTCAAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGCLREH*MCSSPV
Trigger: AACAGGGCTTGAGCACATGCAGTGCTCTCTTAGGCA...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCGCCAGTGTTTGCACCTaGTTAAACCTGGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGASVCT*LNLGLQ
Trigger: CTGAAGTCCCAGGTTTAAGCAGGTGCAAACACTGGC...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAAGTCATCTTCAAAGCTaGTCCCATGGCTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRASHLQS*SHGCRS
Trigger: GCTTCTGCAGCCATGGGACCAGCTTTGAAGATGACT...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCATGGCGGCCAGTAGTGTaGCCTCCGCTCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VQRNEEMCLRSLCMQLVAWRPVV*PPLPGS
Trigger: TGACCCTGGGAGCGGAGGCCACACTACTGGCCGCCA...TGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTCAATCCTCCGCACCTaGGACTTCAGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKESILRT*DFRKSW
Trigger: CCAGCTCTTCCTGAAGTCCCAGGTGCGGAGGATTGA...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GGTGGTGGTGGCCGGTCTCGGGGGCATGTGTACAGACACATCTTGGAGATGGCTGGATGGCACATCAGTTaGATGGTTGCAATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GGGGRSRGHVYRHILEMAGWHIS*MVAIPE
Trigger: TTCTGGAATTGCAACCATCCAACTGATGTGCCATCC...AGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGGACACATCTTGGAGATaGCTTTCCGAAGGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLDTSWR*LSEGGL
Trigger: GAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTC...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGTGCTTCCATTTCTGCTaGGTGATGGACAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRCFHFC*VMDRSK
Trigger: CTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCA...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAAGACCGACGCAGTTCTaGTCTGTCTACACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGRPTQF*SVYTLL
Trigger: AAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCT...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGACACATGCTGTTGTGGTaGTGGAGAAAGCTTCACGAG +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGHMLLW*WRKLHE
Trigger: CTCGTGAAGCTTTCTCCACCACCACAACAGCATGTG...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCCACATGCTGTTGTGGTaGTGGAGAAAGCTTCACGAG +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTHMLLW*WRKLHE
Trigger: CTCGTGAAGCTTTCTCCACCACCACAACAGCATGTG...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGACCACATGCTGTTGTaGTGGTGGAGAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGADHMLL*WWRKLH
Trigger: GTGAAGCTTTCTCCACCACCACAACAGCATGTGGTC...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTCCAAGGAGTAGGGGCTaGATGTTGAGGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSPRSRG*MLRAVQ
Trigger: CTGCACTGCCCTCAACATCCAGCCCCTACTCCTTGG...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGTTCTCCTGCAGAGTTTaGGGGTTTGGAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEFSCRV*GFGGPR
Trigger: CCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGCCAAATCGCTCAGTCTaGTCTTCCTCCCCATGTACC +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRPNRSV*SSSPCT
Trigger: GGTACATGGGGAGGAAGACCAGACTGAGCGATTTGG...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGCCAAATCGCTCAGTCTaGTCTTCCTCCCCATGTACC +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEPNRSV*SSSPCT
Trigger: GGTACATGGGGAGGAAGACCAGACTGAGCGATTTGG...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTCCAAATCGCTCAGTCTaGTCTTCCTCCCCATGTACC +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFPNRSV*SSSPCT
Trigger: GGTACATGGGGAGGAAGACCAGACTGAGCGATTTGG...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAAGAGGCCTGACAGTTTaGATCTGTGTCCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGRGLTV*ICVLTQ
Trigger: TTGGGTGAGGACACAGATCCAAACTGTCAGGCCTCT...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGACATGTGGGATGGTGTaGACTTTTGGACAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRTCGMV*TFGQVS
Trigger: AGACACCTGTCCAAAAGTTCACACCATCCCACATGT...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGAAGGCGGTCTCTGGGTaGCTGGGGTTCAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLKAVSG*LGFRLS
Trigger: CGAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTT...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCCACAGGATCTTCCTGTaGGAATTGCCCCAAATCAGA +
Preference number: 4 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGHRIFL*ELPQIR
Trigger: TCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTG...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCTGGGCCAGCGACTCTaGCTCTGCTCCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNLGQRL*LCSSSL
Trigger: CAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAG...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAGATCACTGTGAGAACTaGACGAAATCAGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRADHCEN*TKSDLL
Trigger: GAGGAGGTCTGATTTCGTTCAGTTCTCACAGTGATC...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGATCACTGTGAGAACTaGACGAAATCAGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRDHCEN*TKSDLL
Trigger: GAGGAGGTCTGATTTCGTTCAGTTCTCACAGTGATC...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGCCCACTGCTGTCTTTTaGGAGTTCCTTTCCCACAAG +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLPTAVF*EFLSHK
Trigger: CTTGTGGGAAAGGAACTCTCAAAAGACAGCAGTGGG...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524622.5
CDS-3UTR GCA 90 bp CAAGATCAAGTAGCTGGCAAGGCCTGGCTGTCTCGAGGAAACTCCTGGAGAAGATCCTGGAGAAGAGTTTaGCATTGGCGGCCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: QDQVAGKAWLSRGNSWRRSWRRV*HWRPVV
Trigger: CACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGA...TCTTCTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR GCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTAGAGCTGGAAATCAATaGCCTTGGCCTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSRAGNQ*PWPERG
Trigger: CCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCT...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAGTGACAGCCAGTGTTTaGACCTGCTTAAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPVTASV*TCLNLL
Trigger: CAGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCAC...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTCCCAAATCAGAGTCTTaGTGGAGGAACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAPKSES*WRNCFS
Trigger: AGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGG...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGACTCTGCTTCCATTTCTaGTGGGTGATGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGLCFHF*WVMDRS
Trigger: GGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAG...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAGGTCTGTCTACACTCTaGTTCCATTTCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPGLSTL*FHFCWV
Trigger: CACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACC...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGAGCTTCACGAGTCTTTaGCAGCAAAAGTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGSFTSL*QQKSGG
Trigger: ACCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCT...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTTCTGTCAGACCACATaGTGTTGTGGTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGFCQTT*CCGGGE
Trigger: TTCTCCACCACCACAACAGCATGTGGTCTGACAGAA...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGATGCTGCCTTTCTCCTaGAGAGTTTGGGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLMLPFS*RVWGFG
Trigger: TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGCTGAAGTCTCCTAACTaGCCTTGGCAATGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRLKSPN*PWQCQS
Trigger: GCTTTGACATTGCCAAGGGCAGTTAGGAGACTTCAG...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
CDS-3UTR GCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGATGAACAGAGGTaGAGAGGGAATCCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLRDEQR*RGNPSV
Trigger: CACACTAGGATTCCCTCTGCACCTCTGTTCATCCCT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGTGCCTAAGAGAGCACTaGATGTGCTCAAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRCLREH*MCSSPV
Trigger: AACAGGGCTTGAGCACATGCAGTGCTCTCTTAGGCA...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAAGATGTCAGGCCCACTaGTGTCTTTTGAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGRCQAH*CLLRVP
Trigger: AGGAACTCTCAAAAGACAGCAGTGGGCCTGACATCT...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524622.5
CDS-3UTR CCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCATCTCGAGGAAACTCCTaGAGAAGAGTTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRASRGNS*RRVCHW
Trigger: CCAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGA...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTGACTTCAGGAAGAGCTaGAAATCAATGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFDFRKS*KSMPLA
Trigger: GGCCAAGGGCATTGATTTCCAGCTCTTCCTGAAGTC...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCTCCGAAGGCGGTCTCTaGGTGACTGGGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFSEGGL*VTGVQA
Trigger: AGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGA...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAGTTGTGGGGTGGTGGTaGCCGGTCTCGGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKVVGWW*PVSGAC
Trigger: ACATGCCCCCGAGACCGGCCACCACCACCCCACAAC...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGATGGATAGGGAGAAGTaGGCAACTTCTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGMDREK*ATSYPQ
Trigger: CTGAGGGTAAGAAGTTGCCCACTTCTCCCTATCCAT...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAACAGCAGAAGACACATaGATAGGGAGAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRATAEDT*IGRSGQ
Trigger: TTGCCCACTTCTCCCTATCCATGTGTCTTCTGCTGT...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAACAGCAGAAGACACATaGATAGGGAGAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGTAEDT*IGRSGQ
Trigger: TTGCCCACTTCTCCCTATCCATGTGTCTTCTGCTGT...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGTTCGAATCCAGAGTTTaGGATGGTGCTAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGFESRV*DGASTV
Trigger: CACAGTGCTAGCACCATCCCAAACTCTGGATTCGAA...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCATTCGAATCCAGAGTTTaGGATGGTGCTAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAFESRV*DGASTV
Trigger: CACAGTGCTAGCACCATCCCAAACTCTGGATTCGAA...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTTGCAACAGGGTACCTTaGGGTTCGAATCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGACNRVP*GSNPEF
Trigger: AAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCA...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCATGCAACAGGGTACCTTaGGGTTCGAATCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRACNRVP*GSNPEF
Trigger: AAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCA...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGTCTGTGCTCCACTGTaGATCTTCTATGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRVCAPL*IFYGQR
Trigger: TCTCTGCCCATAGAAGATCCACAGTGGAGCACAGAC...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGTCTGTGCTCCACTGTaGATCTTCTATGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEVCAPL*IFYGQR
Trigger: TCTCTGCCCATAGAAGATCCACAGTGGAGCACAGAC...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGATGGGTTTCCGTATTaGTGGCTGGTAGACTACACA +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGDGFPY*WLVDYT
Trigger: TGTGTAGTCTACCAGCCACCAATACGGAAACCCATC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAAGTCTCATCCTTGGCTaGATGGGTTTCCGTATTGGT +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRASLILG*MGFRIG
Trigger: ACCAATACGGAAACCCATCCAGCCAAGGATGAGACT...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTGCTGGGTGATGGACAGGTCCGTGTCCTGTGGCTGCTaGCTTAAAGACCGACGCAGT +
Preference number: 4 (lower is better)
Translates to: SSGLSTLCFHFCWVMDRSVSCGC*LKDRRS
Trigger: ACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACAC...GGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGATGCTGTTGTGGTGGTaGAGAAAGCTTCACGAGTCT +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRMLLWW*RKLHES
Trigger: AGACTCGTGAAGCTTTCTCCACCACCACAACAGCAT...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTCACATGCTGTTGTGGTaGTGGAGAAAGCTTCACGAG +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFHMLLW*WRKLHE
Trigger: CTCGTGAAGCTTTCTCCACCACCACAACAGCATGTG...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTCCAAATCGCTCAGTCTaGTCTTCCTCCCCATGTACC +
Preference number: 4 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFPNRSV*SSSPCT
Trigger: GGTACATGGGGAGGAAGACCAGACTGAGCGATTTGG...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTCCCCATTGTTGGAGGTaGGGCCTGGTGGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCPHCWR*GLVGGD
Trigger: ATCACCACCCACCAGGCCCCACCTCCAACAATGGGG...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTAATGCCGTCAAGTTCTaGGTTCCAGATGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGANAVKF*VPDACF
Trigger: AAAGCATGCATCTGGAACTCAGAACTTGACGGCATT...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316577.12
CDS-3UTR TCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCACCTGCTGGCCAGCATaGGGCAGGGGTCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFTCWPA*GRGLPF
Trigger: AAATGGAAGACCCCTGCCTCATGCTGGCCAGCAGGT...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR TCA 90 bp CCCTCAGCAGGGGGCACAGGATCTTCCTGTGAGAATTGCCCCAAATCAGAGTCTCACAGGATCTTCCTGTaGGAATTGCCCCAAATCAGA +
Preference number: 4 (lower is better)
Translates to: PSAGGTGSSCENCPKSESHRIFL*ELPQIR
Trigger: TCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTG...AGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCCTGCTGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGCACAGGATCTTCCTGTaGGAATTGCCCCAAATCAGA +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEHRIFL*ELPQIR
Trigger: TCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTG...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp CAAGGACTTAACCTTCCTGCCCATGAGATTCTTCTGGAAGAGGCTCTTTCTTGCGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QGLNLPAHEILLEEALSCVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...GCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGGCAGGAAGGTTAAGTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGTTAGGAATACAGGGATaGACAGAGGTGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLLGIQG*TEVQRE
Trigger: TTCCCTCTGCACCTCTGTTCATCCCTGTATTCCTAA...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAGTGTCCAAGATGCTCTaGAACCACATACTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPVSKML*NHILPK
Trigger: CTTAGGCAGTATGTGGTTTCAGAGCATCTTGGACAC...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGCTGACTTCAGGCCCTTaGCCTCCCTTAAGAATATTT +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGLTSGP*PPLRIF
Trigger: AAATATTCTTAAGGGAGGTCAAGGGCCTGAAGTCAG...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTACTTTCCCCTCAGCTTaGCCAAATAGGTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGATFPSA*PNRFLP
Trigger: AGGAAGAAACCTATTTGGTCAAGCTGAGGGGAAAGT...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCATTGGGCTCAGAGGCCTaGCAGTTTGGATCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPLGSEA*QFGSVS
Trigger: GGACACAGATCCAAACTGTCAGGCCTCTGAGCCCAA...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAAGAGCTGGAAATCAATaGCCTTGGCCTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGRAGNQ*PWPERG
Trigger: CCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCT...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGTGACAGCCAGTGTTTaGACCTGCTTAAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGVTASV*TCLNLL
Trigger: CAGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCAC...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGCCCAAATCAGAGTCTTaGTGGAGGAACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLPKSES*WRNCFS
Trigger: AGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGG...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTTCTTCCTGTGAGAATTaGCCCAAATCAGAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGASSCEN*PKSESC
Trigger: GCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGA...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GCCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTTGGGCAGAGAATGTGTaGAACAGGGTACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ALLSLPHYVSDSVCAFSPWAENV*NRVPWG
Trigger: ACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCA...AGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCTCCTCACTGTTGCTTTaGACCTCCTCCAAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTSSLLL*TSSKSK
Trigger: TTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGA...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGTCCTCACTGTTGCTTTaGACCTCCTCCAAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGSSLLL*TSSKSK
Trigger: TTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGA...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGAGCTTCACGAGTCTTTaGCAGCAAAAGTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLESFTSL*QQKSGG
Trigger: ACCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCT...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGCTTCACGAGTCTTTaGCAGCAAAAGTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLSFTSL*QQKSGG
Trigger: ACCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTTCTGTCAGACCACATaGTGTTGTGGTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFFCQTT*CCGGGE
Trigger: TTCTCCACCACCACAACAGCATGTGGTCTGACAGAA...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TATCTGAGCTGGGTCTGTGCTCCACTGTGGATCTTCTATGGGCAGAGAATGTGTCCTCCCCATGTACCATaGTGCCTTTCTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: YLSWVCAPLWIFYGQRMCPPHVP*CLSPAE
Trigger: CTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGG...ACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGTCTCGAGGAAACTCCTaGAGAAGAGTTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLESRGNS*RRVCHW
Trigger: CCAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGA...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGACTTCAGGAAGAGCTaGAAATCAATGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGDFRKS*KSMPLA
Trigger: GGCCAAGGGCATTGATTTCCAGCTCTTCCTGAAGTC...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CAGCTCTCTCCTTATCTGAGCTGGGTCTGTGCTCCACTGTGGATCTTCTATGGGGACTTCAGGAAGAGCTaGAAATCAATGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QLSPYLSWVCAPLWIFYGDFRKS*KSMPLA
Trigger: GGCCAAGGGCATTGATTTCCAGCTCTTCCTGAAGTC...CCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGCACATCAGTTGGATaGTTGCAATTCCAGAACATG +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAGTSVG*LQFQNM
Trigger: CATGTTCTGGAATTGCAACCATCCAACTGATGTGCC...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCGGATGGCACATCAGTTaGATGGTTGCAATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGGWHIS*MVAIPE
Trigger: TTCTGGAATTGCAACCATCCAACTGATGTGCCATCC...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGGATGGCACATCAGTTaGATGGTTGCAATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRGWHIS*MVAIPE
Trigger: TTCTGGAATTGCAACCATCCAACTGATGTGCCATCC...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CAGAATCCTGATGGATGGCACATCAGTTGGATGGTTGCAATTCCAGAACATGTGTCCGAAGGCGGTCTCTaGGTGACTGGGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QNPDGWHISWMVAIPEHVSEGGL*VTGVQA
Trigger: AGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGA...CACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCAGGTGTTGTGGGGTGGTaGTGGCCGGTCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKAGVVGW*WPVSGA
Trigger: TGCCCCCGAGACCGGCCACCACCACCCCACAACACC...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCATGCAACAGGGTACCTTaGGGTTCGAATCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPCNRVP*GSNPEF
Trigger: AAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCA...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTGATGGGTTTCCGTATTaGTGGCTGGTAGACTACACA +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFDGFPY*WLVDYT
Trigger: TGTGTAGTCTACCAGCCACCAATACGGAAACCCATC...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAGATGGGTTTCCGTATTaGTGGCTGGTAGACTACACA +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPDGFPY*WLVDYT
Trigger: TGTGTAGTCTACCAGCCACCAATACGGAAACCCATC...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGATCATCCTTGGCTGGATaGGTTTCCGTATTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGSSLAG*VSVLVA
Trigger: AGCCACCAATACGGAAACCCATCCAGCCAAGGATGA...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTTCATCCTTGGCTGGATaGGTTTCCGTATTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFSSLAG*VSVLVA
Trigger: AGCCACCAATACGGAAACCCATCCAGCCAAGGATGA...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGTCTCATCCTTGGCTaGATGGGTTTCCGTATTGGT +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLSLILG*MGFRIG
Trigger: ACCAATACGGAAACCCATCCAGCCAAGGATGAGACT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGTCTCATCCTTGGCTaGATGGGTTTCCGTATTGGT +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPSLILG*MGFRIG
Trigger: ACCAATACGGAAACCCATCCAGCCAAGGATGAGACT...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTAGAAAGTCTCATCCTTaGCTGGATGGGTTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGARKSHP*LDGFPY
Trigger: ATACGGAAACCCATCCAGCCAAGGATGAGACTTTCT...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTCCCATGAGATTCTTCTaGAAGAGGCTCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAPMRFF*KRLFLA
Trigger: AGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGG...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAGTGTCCTGTGGCTGCTaGCTTAAAGACCGACGCAGT +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGVSCGC*LKDRRS
Trigger: ACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACAC...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGGTGCCTGGGTCTGCTaGGCCAGCGACTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLGAWVC*ASDSDS
Trigger: AGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACC...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCCTGTGGCTGCTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGCATGCTGTTGTGGTGGTaGAGAAAGCTTCACGAGTCT +
Preference number: 4 (lower is better)
Translates to: SCGCWLKDRRSSGLSTLCMLLWW*RKLHES
Trigger: AGACTCGTGAAGCTTTCTCCACCACCACAACAGCAT...GCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGACCACATGCTGTTGTaGTGGTGGAGAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFDHMLL*WWRKLH
Trigger: GTGAAGCTTTCTCCACCACCACAACAGCATGTGGTC...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCCCAAGGAGTAGGGGCTaGATGTTGAGGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRPRSRG*MLRAVQ
Trigger: CTGCACTGCCCTCAACATCCAGCCCCTACTCCTTGG...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCAGCAGTTGTCGAAGCTaGGCCGAGGCCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRSSCRS*AEAFTG
Trigger: ACCTGTGAAGGCCTCGGCCCAGCTTCGACAACTGCT...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR CCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAGCACCATCTCCCCTTaGTACTGTATAATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTSTISP*YCIMSE
Trigger: CTCACTCATTATACAGTACCAAGGGGAGATGGTGCT...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAACCTGAGAGGGGGTGGTaGAAAATCGGGCGGGTATCC +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKPERGW*KIGRVS
Trigger: GGATACCCGCCCGATTTTTCACCACCCCCTCTCAGG...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTACCTGCTGGCCAGCATaGGGCAGGGGTCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFTCWPA*GRGLPF
Trigger: AAATGGAAGACCCCTGCCTCATGCTGGCCAGCAGGT...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp CGCAGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTGCTGGGTGATGGACAGGACATGTGGGATGGTGTaGACTTTTGGACAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RSSGLSTLCFHFCWVMDRTCGMV*TFGQVS
Trigger: AGACACCTGTCCAAAAGTTCACACCATCCCACATGT...CCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGACACAGGATCTTCCTGTaGGAATTGCCCCAAATCAGA +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGHRIFL*ELPQIR
Trigger: TCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTG...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGGATCACTGTGAGAACTaGACGAAATCAGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKEDHCEN*TKSDLL
Trigger: GAGGAGGTCTGATTTCGTTCAGTTCTCACAGTGATC...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCGAAGAGGACATCTTCTaGATCTTCTTGCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTEEDIF*IFLHFV
Trigger: GACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTC...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTCCCAAATCAGAGTCTTaGTGGAGGAACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFPKSES*WRNCFS
Trigger: AGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGG...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAACTGTGGACATCCTCTaGTGTGTTTCCTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGTVDIL*CVSSSQ
Trigger: CTGTGAAGAGGAAACACAGCAGAGGATGTCCACAGT...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GCTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTTGGGCAGAGAATGTGTaGAACAGGGTACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AGLKTDAVLVCLHSASISWAENV*NRVPWG
Trigger: ACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCA...AGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGAAGAGGCTCTTTCTTaGTCTGCTCTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGEEALS*SALSFP
Trigger: TGGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTC...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGAAGAGGCTCTTTCTTaGTCTGCTCTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGEEALS*SALSFP
Trigger: TGGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAGAAGAGGCTCTTTCTTaGTCTGCTCTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAEEALS*SALSFP
Trigger: TGGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTC...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTTCTGTCAGACCACATaGTGTTGTGGTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKEFCQTT*CCGGGE
Trigger: TTCTCCACCACCACAACAGCATGTGGTCTGACAGAA...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGCTGAACTCATTCAACTaGTGTTGCCTGCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLLNSFN*CCLLKR
Trigger: CCTTTTGAGCAGGCAACAGCAGTTGAATGAGTTCAG...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR GCA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAGAAATGTGTCCAAGATaGTCTGAAACCACATACTGC +
Preference number: 4 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAEMCPR*SETTYC
Trigger: GCAGTATGTGGTTTCAGAGCATCTTGGACACATTTC...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAACTTCTGGAAATGCGTaGATCTTACTTCTCCCATTC +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGTSGNA*ILLLPF
Trigger: GAATGGGAGAAGTAAGATGCACGCATTTCCAGAAGT...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCTGGCGGCCAGTAGTGTaGCCTCCGCTCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSWRPVV*PPLPGS
Trigger: TGACCCTGGGAGCGGAGGCCACACTACTGGCCGCCA...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTCTCGAGGAAACTCCTaGAGAAGAGTTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKESRGNS*RRVCHW
Trigger: CCAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGA...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTCCAAGATCAAGTAGCTaGCAAGGCCTGGCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCPRSSS*QGLAVS
Trigger: CGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGG...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTGACTTCAGGAAGAGCTaGAAATCAATGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSDFRKS*KSMPLA
Trigger: GGCCAAGGGCATTGATTTCCAGCTCTTCCTGAAGTC...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCTCAATCCTCCGCACCTaGGACTTCAGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFSILRT*DFRKSW
Trigger: CCAGCTCTTCCTGAAGTCCCAGGTGCGGAGGATTGA...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGATGGTGTGAACTTTTaGACAGGTGTCTTAGACACA +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGDGVNF*TGVLDT
Trigger: TGTGTCTAAGACACCTGTCCAAAAGTTCACACCATC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGGCACATCAGTTGGATaGTTGCAATTCCAGAACATG +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEGTSVG*LQFQNM
Trigger: CATGTTCTGGAATTGCAACCATCCAACTGATGTGCC...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCACAGAATCCTGATGGATaGCACATCAGTTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPQNPDG*HISWMV
Trigger: AACCATCCAACTGATGTGCCATCCATCAGGATTCTG...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAGACACATCTTGGAGATaGCTTTCCGAAGGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPDTSWR*LSEGGL
Trigger: GAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTC...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAATCAGAGTCTTGCTaGAGGAACTGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTKSESC*RNCFSS
Trigger: AGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTT...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAACAGCAGAAGACACATaGATAGGGAGAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGTAEDT*IGRSGQ
Trigger: TTGCCCACTTCTCCCTATCCATGTGTCTTCTGCTGT...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTGCAACAGGGTACCTTaGGGTTCGAATCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKECNRVP*GSNPEF
Trigger: AAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCA...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCGATGGGTTTCCGTATTaGTGGCTGGTAGACTACACA +
Preference number: 4 (lower is better)
Translates to: CVQQGTLGFESRVWDGASDGFPY*WLVDYT
Trigger: TGTGTAGTCTACCAGCCACCAATACGGAAACCCATC...GCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp GAGAAAGCTTCACGAGTCTTTGCCAGCAAAAGTCTGGTGGTGGTGGGGGTGCCTAGAAAGTCTCATCCTTaGCTGGATGGGTTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: EKASRVFASKSLVVVGVPRKSHP*LDGFPY
Trigger: ATACGGAAACCCATCCAGCCAAGGATGAGACTTTCT...AGGCACCCCCACCACCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGAAAGTCTCATCCTTaGCTGGATGGGTTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPRKSHP*LDGFPY
Trigger: ATACGGAAACCCATCCAGCCAAGGATGAGACTTTCT...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCCTGTGGCTGCTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGCCCCATGAGATTCTTCTaGAAGAGGCTCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SCGCWLKDRRSSGLSTLCPMRFF*KRLFLA
Trigger: AGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGG...GCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTGCTTCCATTTCTGCTaGGTGATGGACAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSCFHFC*VMDRSK
Trigger: CTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCA...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAACCAGCAAAAGTCTGGTaGTGGTGGGGGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKPAKVW*WWGCLG
Trigger: ACCCAGGCACCCCCACCACCACCAGACTTTTGCTGG...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTATGCTGTTGTGGTGGTaGAGAAAGCTTCACGAGTCT +
Preference number: 4 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFMLLWW*RKLHES
Trigger: AGACTCGTGAAGCTTTCTCCACCACCACAACAGCAT...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTGCCCCAAATCAGAGTCTTGCTGGAGGAACTGCTTCTCTTCTTTCACTTTGTCCCAAGGAGTAGGGGCTaGATGTTGAGGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LPQIRVLLEELLLFFHFVPRSRG*MLRAVQ
Trigger: CTGCACTGCCCTCAACATCCAGCCCCTACTCCTTGG...GACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp CCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTATTCTCCTGCAGAGTTTaGGGGTTTGGAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: PFCLCLTTYQTQFVPSPLFSCRV*GFGGPR
Trigger: CCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA...TAGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp GCCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTAGAGGCCTGACAGTTTaGATCTGTGTCCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: ALLSLPHYVSDSVCAFSPRGLTV*ICVLTQ
Trigger: TTGGGTGAGGACACAGATCCAAACTGTCAGGCCTCT...AGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR CAA 72 bp TCTTCTATGGGCAGAGAATGTGTGCAACAGGGTACCTaGGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGC +
Preference number: 4 (lower is better)
Translates to: SSMGRECVQQGT*GFESRVWDGAS
Trigger: GCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCAGAAGGCATCAGCAGTaGCAGCCAGTGTTTGCACCT +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFRRHQQ*QPVFAP
Trigger: AGGTGCAAACACTGGCTGTCACTGCTGATGCCTTCT...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCAAGGCGGTCTCTGGGTaGCTGGGGTTCAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSKAVSG*LGFRLS
Trigger: CGAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTT...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGTAGGGGCTGGATGTTaGGGGCAGTGCAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALVGAGC*GQCSFL
Trigger: CAGGAAACTGCACTGCCCTCAACATCCAGCCCCTAC...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR TCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGACTGACTTCAGGCCCTTaGCCTCCCTTAAGAATATTT +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGLTSGP*PPLRIF
Trigger: AAATATTCTTAAGGGAGGTCAAGGGCCTGAAGTCAG...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp TGGTGGTGGCCGGTCTCGGGGGCATGTGTACAGACACATCTTGGAGATGGCTTTGTAGATAAACTGTCCTaGTTCCTCAGAAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: WWWPVSGACVQTHLGDGFVDKLS*FLRKSF
Trigger: GAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTAC...AAAGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACCACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp CAGCCAAGATCAAGTAGCTGGCAAGGCCTGGCTGTCTCGAGGAAACTCCTGGAGGTAGATAAACTGTCCTaGTTCCTCAGAAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: QPRSSSWQGLAVSRKLLEVDKLS*FLRKSF
Trigger: GAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTAC...CTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR GCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCTCCTGGAGAAGAGTTTaGCATTGGCGGCCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRSWRRV*HWRPVV
Trigger: CACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGA...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCTGCTGGAAGCCAAACTACAGCCAAGATCAAGTAGCTGGCAAGGCCTGGCTGGAAGAGGACATCTTCTaGATCTTCTTGCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: CCWKPNYSQDQVAGKAWLEEDIF*IFLHFV
Trigger: GACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTC...CAGCCAGGCCTTGCCAGCTACTTGATCTTGGCTGTAGTTTGGCTTCCAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR GCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGAGCCAGTGTTTGCACCTaGTTAAACCTGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGASVCT*LNLLAS
Trigger: GCTGGCCAGCAGGTTTAAGCAGGTGCAAACACTGGC...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTACTGTGGACATCCTCTaGTGTGTTTCCTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSTVDIL*CVSSSQ
Trigger: CTGTGAAGAGGAAACACAGCAGAGGATGTCCACAGT...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAATGGGCAGAGAATGTGTaGAACAGGGTACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CLRSLCMQLVAALGCGFQWAENV*NRVPWG
Trigger: ACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCA...TTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCCTCTGCTTCCATTTCTaGTGGGTGATGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRLCFHF*WVMDRS
Trigger: GGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAG...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTCTCTGCTTCCATTTCTaGTGGGTGATGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSLCFHF*WVMDRS
Trigger: GGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAG...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CAAGGACTTAACCTTCCTGCCCATGAGATTCTTCTGGAAGAGGCTCTTTCTTGCAAAGTGTCCTGTGGCTaGTGGCTTAAAGACCGACGC +
Preference number: 4 (lower is better)
Translates to: QGLNLPAHEILLEEALSCKVSCG*WLKDRR
Trigger: GCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTT...GCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGGCAGGAAGGTTAAGTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTAAAGTGTCCTGTGGCTaGTGGCTTAAAGACCGACGC +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCKVSCG*WLKDRR
Trigger: GCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTT...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp CAGAGAATGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGAGCTTCACGAGTCTTTaGCAGCAAAAGTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QRMCATGYLGVRIQSLGWSFTSL*QQKSGG
Trigger: ACCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCT...CCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGACCCCATGTACCATGCTaGCTTTCTCCTGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGPHVPC*LSPAEF
Trigger: AAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGG...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGACCTCCCCATGTACCATaGTGCCTTTCTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGPPHVP*CLSPAE
Trigger: CTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGG...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGCCTCCCCATGTACCATaGTGCCTTTCTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLPPHVP*CLSPAE
Trigger: CTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGG...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATCAACTGCTGTTGCCTaGTCAAAAGGGGAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGSTAVA*SKGEAE
Trigger: TTCCGCTTCCCCTTTTGAGCAGGCAACAGCAGTTGA...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR GCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAAGGGATGAACAGAGGTaGAGAGGGAATCCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGRDEQR*RGNPSV
Trigger: CACACTAGGATTCCCTCTGCACCTCTGTTCATCCCT...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAGAAATGTGTCCAAGATaGTCTGAAACCACATACTGC +
Preference number: 4 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPEMCPR*SETTYC
Trigger: GCAGTATGTGGTTTCAGAGCATCTTGGACACATTTC...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAAACTGATGTTGCCATaGTTCCTGTACAGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPKLMLP*FLYSLR
Trigger: CCGCAGGCTGTACAGGAAGCATGGCAACATCAGTTT...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp TCTATGGGCAGAGAATGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTGTGACAGCCAGTGTTTaGACCTGCTTAAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: SMGRECVQQGTLGFESRVVTASV*TCLNLG
Trigger: TCCCAGGTTTAAGCAGGTGCAAACACTGGCTGTCAC...AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp CAGCCAAGATCAAGTAGCTGGCAAGGCCTGGCTGTCTCGAGGAAACTCCTGGAGAATTTGCCGCAATCCTaGAGCCAGTCTTCAATTTTA +
Preference number: 4 (lower is better)
Translates to: QPRSSSWQGLAVSRKLLENLPQS*SQSSIL
Trigger: TAAAATTGAAGACTGGCTGCAGGATTGCGGCAAATT...CTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTAGCTGGCAAGGCCTaGCTGTCTCGAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLVAGKA*LSRGNS
Trigger: GGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTAC...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTCCAAGATCAAGTAGCTaGCAAGGCCTGGCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFPRSSS*QGLAVS
Trigger: CGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGG...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGATGGTGTGAACTTTTaGACAGGTGTCTTAGACACA +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEDGVNF*TGVLDT
Trigger: TGTGTCTAAGACACCTGTCCAAAAGTTCACACCATC...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCACGGTCTCTGGGTGACTaGGGTTCAGGCTCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKARSLGD*GSGSRD
Trigger: GTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCG...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCACTTCCAACACAACTTaGTCCAAACTGTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTTSNTT*SKLFLL
Trigger: CAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGT...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTAAATCAGAGTCTTGCTaGAGGAACTGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFKSESC*RNCFSS
Trigger: AGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTT...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGAAATCAGAGTCTTGCTaGAGGAACTGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRKSESC*RNCFSS
Trigger: AGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTT...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTGCTGGGTGATGGACAGGTCCATGGATAGGGAGAAGTaGGCAACTTCTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSGLSTLCFHFCWVMDRSMDREK*ATSYPQ
Trigger: CTGAGGGTAAGAAGTTGCCCACTTCTCCCTATCCAT...GGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp CATCACTTCCAACACAACTTGGTCCAAACTGTTCCTTTTGGGGGTGTTGTGGGGGTCTGTGCTCCACTGTaGATCTTCTATGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HHFQHNLVQTVPFGGVVGVCAPL*IFYGQR
Trigger: TCTCTGCCCATAGAAGATCCACAGTGGAGCACAGAC...CCCCACAACACCCCCAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATCTCCTTATCTGAGCTaGGTCTGTGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAASPYLS*VCAPLW
Trigger: CCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGA...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GCCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTAGTCTCATCCTTGGCTaGATGGGTTTCCGTATTGGT +
Preference number: 4 (lower is better)
Translates to: ALLSLPHYVSDSVCAFSPSLILG*MGFRIG
Trigger: ACCAATACGGAAACCCATCCAGCCAAGGATGAGACT...AGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp AGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTGCTGGGTGATGGACAGGTCCAGTCTCATCCTTGGCTaGATGGGTTTCCGTATTGGT +
Preference number: 4 (lower is better)
Translates to: SSGLSTLCFHFCWVMDRSSLILG*MGFRIG
Trigger: ACCAATACGGAAACCCATCCAGCCAAGGATGAGACT...GGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp GCTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTTGCTTCCATTTCTGCTaGGTGATGGACAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: AGLKTDAVLVCLHSASISCFHFC*VMDRSK
Trigger: CTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCA...AGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TCTATGGGCAGAGAATGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTAGACCGACGCAGTTCTaGTCTGTCTACACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SMGRECVQQGTLGFESRVRPTQF*SVYTLL
Trigger: AAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCT...AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAGACCGACGCAGTTCTaGTCTGTCTACACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPRPTQF*SVYTLL
Trigger: AAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCT...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGTGTCCTGTGGCTGCTaGCTTAAAGACCGACGCAGT +
Preference number: 4 (lower is better)
Translates to: VQRNEEMCLRSLCMQLVAVSCGC*LKDRRS
Trigger: ACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACAC...TGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTCCAAGGAGTAGGGGCTaGATGTTGAGGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLPRSRG*MLRAVQ
Trigger: CTGCACTGCCCTCAACATCCAGCCCCTACTCCTTGG...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTTTCTCCTGCAGAGTTTaGGGGTTTGGAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCFSCRV*GFGGPR
Trigger: CCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAACCAAATCGCTCAGTCTaGTCTTCCTCCCCATGTACC +
Preference number: 4 (lower is better)
Translates to: CLRSLCMQLVAALGCGFQPNRSV*SSSPCT
Trigger: GGTACATGGGGAGGAAGACCAGACTGAGCGATTTGG...TTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCAGTCTCCTGGTTTCTGTaGGTGGGAAGGGTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAAVSWFL*VGRVGN
Trigger: GTTTCCTACCCTTCCCACCCACAGAAACCAGGAGAC...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTCACATGCTGTTGTGGTaGTGGAGAAAGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCHMLLW*WRKPPP
Trigger: TGGAGGAGGCTTTCTCCACCACCACAACAGCATGTG...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528240.1
CDS-3UTR CCA 90 bp TGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAGACCACATGCTGTTGTaGTGGTGGAGAAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CLRSLCMQLVAALGCGFQDHMLL*WWRKPP
Trigger: AGGAGGCTTTCTCCACCACCACAACAGCATGTGGTC...TTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528240.1
CDS-3UTR TCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCCCTGAGAGGGGGTGGTaGAAAATCGGGCGGGTATCC +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSPERGW*KIGRVS
Trigger: GGATACCCGCCCGATTTTTCACCACCCCCTCTCAGG...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp TGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCGACACTAGATCACTGTaGGAACTGAACGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: CVQQGTLGFESRVWDGASDTRSL*ELNEIR
Trigger: TCTGATTTCGTTCAGTTCTCACAGTGATCTAGTGTC...GCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGACACTAGATCACTGTaGGAACTGAACGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFDTRSL*ELNEIR
Trigger: TCTGATTTCGTTCAGTTCTCACAGTGATCTAGTGTC...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAGTTCTGAGTTCCAGATaGATGCTTTCTTCCTTTATA +
Preference number: 4 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGVLSSR*MLSSFI
Trigger: TATAAAGGAAGAAAGCATGCATCTGGAACTCAGAAC...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316577.12
CDS-3UTR GCA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGTAGATAAACTGTCCTaGTTCCTCAGAAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEVDKLS*FLRKSF
Trigger: GAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTAC...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATCCTGGAGAAGAGTTTaGCATTGGCGGCCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGSWRRV*HWRPVV
Trigger: CACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGA...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTGCTGGGTGATGGACAGGTCCTCTTCCTGTGAGAATTaGCCCAAATCAGAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SSGLSTLCFHFCWVMDRSSSCEN*PKSESC
Trigger: GCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGA...GGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTCCTGTGAGAATTaGCCCAAATCAGAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSSSCEN*PKSESC
Trigger: GCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGA...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTTGGGCAGAGAATGTGTaGAACAGGGTACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFWAENV*NRVPWG
Trigger: ACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCA...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCTCTGCTTCCATTTCTaGTGGGTGATGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNLCFHF*WVMDRS
Trigger: GGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAG...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTGGTCTGTCTACACTCTaGTTCCATTTCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSGLSTL*FHFCWV
Trigger: CACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACC...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCAGGTCTGTCTACACTCTaGTTCCATTTCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAAGLSTL*FHFCWV
Trigger: CACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACC...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCATTCTGTCAGACCACATaGTGTTGTGGTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPFCQTT*CCGGGE
Trigger: TTCTCCACCACCACAACAGCATGTGGTCTGACAGAA...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTATGCTGCCTTTCTCCTaGAGAGTTTGGGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCMLPFS*RVWGFG
Trigger: TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCCCCATGTACCATGCTaGCTTTCTCCTGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFPHVPC*LSPAEF
Trigger: AAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGG...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTAGAAATGAAGAGATGTaGCTAAGGTCTTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFRNEEM*LRSLCM
Trigger: CATGCACAAAGACCTTAGGCACATCTCTTCATTTCT...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCACTGAAGTCTCCTAACTaGCCTTGGCAATGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPLKSPN*PWQCQS
Trigger: GCTTTGACATTGCCAAGGGCAGTTAGGAGACTTCAG...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
CDS-3UTR CCA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGAAACGTCATCCAGGCTaGAAGGCTCAGGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLKRHPG*KAQDLG
Trigger: TCCCAGATCCTGAGCCTTCCAGCCTGGATGACGTTT...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316577.12
ENST00000449076.6
CDS-3UTR CCA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCACGGTCTCTGGGTGACTaGGGTTCAGGCTCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSRSLGD*GSGSRD
Trigger: GTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCG...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGAGACACATCTTGGAGATaGCTTTCCGAAGGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGDTSWR*LSEGGL
Trigger: GAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTC...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAACAGCAGAAGACACATaGATAGGGAGAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGTAEDT*IGRSGQ
Trigger: TTGCCCACTTCTCCCTATCCATGTGTCTTCTGCTGT...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCGTCTGTGCTCCACTGTaGATCTTCTATGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFVCAPL*IFYGQR
Trigger: TCTCTGCCCATAGAAGATCCACAGTGGAGCACAGAC...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATTCTCCTTATCTGAGCTaGGTCTGTGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNSPYLS*VCAPLW
Trigger: CCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGA...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGGATGGTTGCAATTCCAGAACATGTGGGATGGTGTGAACTTTTGGACAGGTGTTCTCCTTATCTGAGCTaGGTCTGTGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: WMVAIPEHVGWCELLDRCSPYLS*VCAPLW
Trigger: CCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGA...ACACCTGTCCAAAAGTTCACACCATCCCACATGTTCTGGAATTGCAACCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGGTTTCCGTATTGGTaGCTGGTAGACTACACAGCT +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCGFPYW*LVDYTA
Trigger: AGCTGTGTAGTCTACCAGCCACCAATACGGAAACCC...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCGGGTTTCCGTATTGGTaGCTGGTAGACTACACAGCT +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFGFPYW*LVDYTA
Trigger: AGCTGTGTAGTCTACCAGCCACCAATACGGAAACCC...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAATCATCCTTGGCTGGATaGGTTTCCGTATTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: CLRSLCMQLVAALGCGFQSSLAG*VSVLVA
Trigger: AGCCACCAATACGGAAACCCATCCAGCCAAGGATGA...TTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTCCCATGAGATTCTTCTaGAAGAGGCTCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSPMRFF*KRLFLA
Trigger: AGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGG...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTTGCTTCCATTTCTGCTaGGTGATGGACAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCCFHFC*VMDRSK
Trigger: CTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCA...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATGCTTCCATTTCTGCTaGGTGATGGACAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAACFHFC*VMDRSK
Trigger: CTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCA...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCACACATGCTGTTGTGGTaGTGGAGAAAGCTTCACGAG +
Preference number: 4 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAAHMLLW*WRKLHE
Trigger: CTCGTGAAGCTTTCTCCACCACCACAACAGCATGTG...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGCCAAATCGCTCAGTCTaGTCTTCCTCCCCATGTACC +
Preference number: 4 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLPNRSV*SSSPCT
Trigger: GGTACATGGGGAGGAAGACCAGACTGAGCGATTTGG...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATCTCCTAACTGCCCTTaGCAATGTCAAAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGSPNCP*QCQSLG
Trigger: TCCCAAGCTTTGACATTGCCAAGGGCAGTTAGGAGA...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAAGTTCCCCTGTCTCCTaGTTTCTGTGGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKSSPVS*FLWVGR
Trigger: CCTTCCCACCCACAGAAACCAGGAGACAGGGGAACT...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp TGCTGGAGGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTAGAAGGCATCAGCAGTaGCAGCCAGTGTTTGCACCT +
Preference number: 4 (lower is better)
Translates to: CWRNCFSSFTLSITSNTTRRHQQ*QPVFAP
Trigger: AGGTGCAAACACTGGCTGTCACTGCTGATGCCTTCT...AGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp TGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAACATGTGGGATGGTGTaGACTTTTGGACAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: CLRSLCMQLVAALGCGFQTCGMV*TFGQVS
Trigger: AGACACCTGTCCAAAAGTTCACACCATCCCACATGT...TTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTGAGTATCCGCAATCCTaGAGCCAGTCTTCAATTTTA +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSEYPQS*SQSSIL
Trigger: TAAAATTGAAGACTGGCTGCAGGATTGCGGATACTC...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
CDS-3UTR GCA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGGTAGATAAACTGTCCTaGTTCCTCAGAAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKEVDKLS*FLRKSF
Trigger: GAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTAC...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAATCCTGGAGAAGAGTTTaGCATTGGCGGCCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKSWRRV*HWRPVV
Trigger: CACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGA...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTTCCTGGAGAAGAGTTTaGCATTGGCGGCCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLSWRRV*HWRPVV
Trigger: CACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGA...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTGAAGAGGACATCTTCTaGATCTTCTTGCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSEEDIF*IFLHFV
Trigger: GACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTC...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCAGAGCTGGAAATCAATaGCCTTGGCCTGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPRAGNQ*PWPERG
Trigger: CCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCT...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTCCCAAATCAGAGTCTTaGTGGAGGAACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSPKSES*WRNCFS
Trigger: AGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGG...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCATCTGAGCTGGGTCTGTaGTCCACTGTGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: VQRNEEMCLRSLCMQLVASELGL*STVDLL
Trigger: TAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGA...TGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATCTGAGCTGGGTCTGTaGTCCACTGTGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGSELGL*STVDLL
Trigger: TAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGA...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGGGTCTGTCTACACTCTaGTTCCATTTCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLGLSTL*FHFCWV
Trigger: CACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACC...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATCCTCACTGTTGCTTTaGACCTCCTCCAAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGSSLLL*TSSKSK
Trigger: TTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGA...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGAATGCTGCCTTTCTCCTaGAGAGTTTGGGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGMLPFS*RVWGFG
Trigger: TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp TTGCCCCAAATCAGAGTCTTGCTGGAGGAACTGCTTCTCTTCTTTCACTTTGTCCCCCATGTACCATGCTaGCTTTCTCCTGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LPQIRVLLEELLLFFHFVPHVPC*LSPAEF
Trigger: AAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGG...GACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTAGAAATGAAGAGATGTaGCTAAGGTCTTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFRNEEM*LRSLCM
Trigger: CATGCACAAAGACCTTAGGCACATCTCTTCATTTCT...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTCTCGAGGAAACTCCTaGAGAAGAGTTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSSRGNS*RRVCHW
Trigger: CCAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGA...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCTCTCGAGGAAACTCCTaGAGAAGAGTTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRSRGNS*RRVCHW
Trigger: CCAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGA...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAGGATGGCACATCAGTTaGATGGTTGCAATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPGWHIS*MVAIPE
Trigger: TTCTGGAATTGCAACCATCCAACTGATGTGCCATCC...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGACAGAATCCTGATGGATaGCACATCAGTTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGQNPDG*HISWMV
Trigger: AACCATCCAACTGATGTGCCATCCATCAGGATTCTG...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTATGGATAGGGAGAAGTaGGCAACTTCTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSMDREK*ATSYPQ
Trigger: CTGAGGGTAAGAAGTTGCCCACTTCTCCCTATCCAT...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAATCTCCTTATCTGAGCTaGGTCTGTGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKSPYLS*VCAPLW
Trigger: CCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGA...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATTCATCCTTGGCTGGATaGGTTTCCGTATTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNSSLAG*VSVLVA
Trigger: AGCCACCAATACGGAAACCCATCCAGCCAAGGATGA...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATGCTGTTGTGGTGGTaGAGAAAGCTTCACGAGTCT +
Preference number: 4 (lower is better)
Translates to: CLRSLCMQLVAALGCGFQMLLWW*RKLHES
Trigger: AGACTCGTGAAGCTTTCTCCACCACCACAACAGCAT...TTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGACACATGCTGTTGTGGTaGTGGAGAAAGCTTCACGAG +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGHMLLW*WRKLHE
Trigger: CTCGTGAAGCTTTCTCCACCACCACAACAGCATGTG...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CAGAATCCTGATGGATGGCACATCAGTTGGATGGTTGCAATTCCAGAACATGTGGACCACATGCTGTTGTaGTGGTGGAGAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QNPDGWHISWMVAIPEHVDHMLL*WWRKLH
Trigger: GTGAAGCTTTCTCCACCACCACAACAGCATGTGGTC...CACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGACCACATGCTGTTGTaGTGGTGGAGAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VQRNEEMCLRSLCMQLVADHMLL*WWRKLH
Trigger: GTGAAGCTTTCTCCACCACCACAACAGCATGTGGTC...TGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAATTCTCCTGCAGAGTTTaGGGGTTTGGAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKFSCRV*GFGGPR
Trigger: CCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAAGCACCATCTCCCCTTaGTACTGTATAATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGSTISP*YCIMSE
Trigger: CTCACTCATTATACAGTACCAAGGGGAGATGGTGCT...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATTTTAGAGCCAGAAAGTaGGGTGTCCTTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNFRARK*GVLPLF
Trigger: GAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAA...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAGACACTAGATCACTGTaGGAACTGAACGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGDTRSL*ELNEIR
Trigger: TCTGATTTCGTTCAGTTCTCACAGTGATCTAGTGTC...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCGCCAGTGTTTGCACCTaGTTAAACCTGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSASVCT*LNLLAS
Trigger: GCTGGCCAGCAGGTTTAAGCAGGTGCAAACACTGGC...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTCTTCCTGTGAGAATTaGCCCAAATCAGAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSSSCEN*PKSESC
Trigger: GCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGA...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp CAGAATCCTGATGGATGGCACATCAGTTGGATGGTTGCAATTCCAGAACATGTGACTGTGGACATCCTCTaGTGTGTTTCCTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: QNPDGWHISWMVAIPEHVTVDIL*CVSSSQ
Trigger: CTGTGAAGAGGAAACACAGCAGAGGATGTCCACAGT...CACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATACTGTGGACATCCTCTaGTGTGTTTCCTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNTVDIL*CVSSSQ
Trigger: CTGTGAAGAGGAAACACAGCAGAGGATGTCCACAGT...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAGAAGAGGCTCTTTCTTaGTCTGCTCTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGEEALS*SALSFP
Trigger: TGGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTC...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAGGTCTGTCTACACTCTaGTTCCATTTCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKGLSTL*FHFCWV
Trigger: CACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACC...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAATGCTGCCTTTCTCCTaGAGAGTTTGGGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALMLPFS*RVWGFG
Trigger: TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAACCCCATGTACCATGCTaGCTTTCTCCTGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKPHVPC*LSPAEF
Trigger: AAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGG...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTCCCCATGTACCATGCTaGCTTTCTCCTGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLPHVPC*LSPAEF
Trigger: AAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGG...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATTCATTCAACTGCTGTTaGCTGCTCAAAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNSFNCC*LLKRGS
Trigger: GCTTCCCCTTTTGAGCAGGCAACAGCAGTTGAATGA...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR GCA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTCTGAAGTCTCCTAACTaGCCTTGGCAATGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFLKSPN*PWQCQS
Trigger: GCTTTGACATTGCCAAGGGCAGTTAGGAGACTTCAG...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCAGTAGCTGGCAAGGCCTaGCTGTCTCGAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSVAGKA*LSRGNS
Trigger: GGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTAC...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCATCAATCCTCCGCACCTaGGACTTCAGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKASILRT*DFRKSW
Trigger: CCAGCTCTTCCTGAAGTCCCAGGTGCGGAGGATTGA...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp CCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTAGATGGTGTGAACTTTTaGACAGGTGTCTTAGACACA +
Preference number: 4 (lower is better)
Translates to: PFCLCLTTYQTQFVPSPLDGVNF*TGVLDT
Trigger: TGTGTCTAAGACACCTGTCCAAAAGTTCACACCATC...TAGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCGGCACATCAGTTGGATaGTTGCAATTCCAGAACATG +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFGTSVG*LQFQNM
Trigger: CATGTTCTGGAATTGCAACCATCCAACTGATGTGCC...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTCAGAATCCTGATGGATaGCACATCAGTTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSQNPDG*HISWMV
Trigger: AACCATCCAACTGATGTGCCATCCATCAGGATTCTG...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTACTTCCAACACAACTTaGTCCAAACTGTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSTSNTT*SKLFLL
Trigger: CAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGT...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGAATGGATAGGGAGAAGTaGGCAACTTCTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGMDREK*ATSYPQ
Trigger: CTGAGGGTAAGAAGTTGCCCACTTCTCCCTATCCAT...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGAACAGCAGAAGACACATaGATAGGGAGAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGTAEDT*IGRSGQ
Trigger: TTGCCCACTTCTCCCTATCCATGTGTCTTCTGCTGT...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATTTCGAATCCAGAGTTTaGGATGGTGCTAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNFESRV*DGASTV
Trigger: CACAGTGCTAGCACCATCCCAAACTCTGGATTCGAA...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAGGGTTTCCGTATTGGTaGCTGGTAGACTACACAGCT +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKGFPYW*LVDYTA
Trigger: AGCTGTGTAGTCTACCAGCCACCAATACGGAAACCC...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGGGTTTCCGTATTGGTaGCTGGTAGACTACACAGCT +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLGFPYW*LVDYTA
Trigger: AGCTGTGTAGTCTACCAGCCACCAATACGGAAACCC...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGATGGGTTTCCGTATTaGTGGCTGGTAGACTACACA +
Preference number: 4 (lower is better)
Translates to: VQRNEEMCLRSLCMQLVADGFPY*WLVDYT
Trigger: TGTGTAGTCTACCAGCCACCAATACGGAAACCCATC...TGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATGATGGGTTTCCGTATTaGTGGCTGGTAGACTACACA +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNDGFPY*WLVDYT
Trigger: TGTGTAGTCTACCAGCCACCAATACGGAAACCCATC...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAATCATCCTTGGCTGGATaGGTTTCCGTATTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKSSLAG*VSVLVA
Trigger: AGCCACCAATACGGAAACCCATCCAGCCAAGGATGA...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTTGGTCCATCATCCTTGGCTGGATaGGTTTCCGTATTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GTASLLSLCPSLPTQLGPSSLAG*VSVLVA
Trigger: AGCCACCAATACGGAAACCCATCCAGCCAAGGATGA...TGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCAGAAAGTCTCATCCTTaGCTGGATGGGTTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFRKSHP*LDGFPY
Trigger: ATACGGAAACCCATCCAGCCAAGGATGAGACTTTCT...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCCCCATGAGATTCTTCTaGAAGAGGCTCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRPMRFF*KRLFLA
Trigger: AGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGG...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAATGCTTCCATTTCTGCTaGGTGATGGACAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKCFHFC*VMDRSK
Trigger: CTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCA...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTAGACCGACGCAGTTCTaGTCTGTCTACACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLRPTQF*SVYTLL
Trigger: AAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCT...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGACCACATGCTGTTGTaGTGGTGGAGAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALDHMLL*WWRKLH
Trigger: GTGAAGCTTTCTCCACCACCACAACAGCATGTGGTC...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTTCTCCTAACTGCCCTTaGCAATGTCAAAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFSPNCP*QCQSLG
Trigger: TCCCAAGCTTTGACATTGCCAAGGGCAGTTAGGAGA...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTATGCTGTTGTGGTGGTaGAGAAAGCCTCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLMLLWW*RKPPPS
Trigger: ACTTGGAGGAGGCTTTCTCCACCACCACAACAGCAT...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528240.1
3UTR CAA 72 bp TCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTaGTGGTGGTGGAGAAAGCTTCACGAGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSLKPILSDHML*WWWRKLHESLP
Trigger: TGGCAAAGACTCGTGAAGCTTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAACATGTGGGATGGTGTaGACTTTTGGACAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALTCGMV*TFGQVS
Trigger: AGACACCTGTCCAAAAGTTCACACCATCCCACATGT...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAATTAGGAATACAGGGATaGACAGAGGTGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKLGIQG*TEVQRE
Trigger: TTCCCTCTGCACCTCTGTTCATCCCTGTATTCCTAA...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTGAGGAGTCTCCAAGTTaGTTTCTTCAAAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFEESPS*FLQRRS
Trigger: AGACCTCCTTTGAAGAAATCAACTTGGAGACTCCTC...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCACAGTGGGGGAGCTTCTaGGCCAGAAGAAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKAQWGSF*ARRRNF
Trigger: GAAATTCCTTCTTCTGGCTCAGAAGCTCCCCCACTG...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCCAGTGGGGGAGCTTCTaGGCCAGAAGAAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSQWGSF*ARRRNF
Trigger: GAAATTCCTTCTTCTGGCTCAGAAGCTCCCCCACTG...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCGAAGAGGACATCTTCTaGATCTTCTTGCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFEEDIF*IFLHFV
Trigger: GACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTC...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAACCCAAATCAGAGTCTTaGTGGAGGAACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKPKSES*WRNCFS
Trigger: AGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGG...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCTCTGAGCTGGGTCTGTaGTCCACTGTGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPSELGL*STVDLL
Trigger: TAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGA...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTGAAGAGGCTCTTTCTTaGTCTGCTCTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSEEALS*SALSFP
Trigger: TGGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTC...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTATTCTGTCAGACCACATaGTGTTGTGGTGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALFCQTT*CCGGGE
Trigger: TTCTCCACCACCACAACAGCATGTGGTCTGACAGAA...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATTCTGAAACCACATACTaGCTAAGAGAGCACTGCATG +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNSETTY*LREHCM
Trigger: CATGCAGTGCTCTCTTAGGCAGTATGTGGTTTCAGA...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATCTGAAACCACATACTaGCTAAGAGAGCACTGCATG +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGSETTY*LREHCM
Trigger: CATGCAGTGCTCTCTTAGGCAGTATGTGGTTTCAGA...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGATGGTGTGAACTTTTaGACAGGTGTCTTAGACACA +
Preference number: 4 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCDGVNF*TGVLDT
Trigger: TGTGTCTAAGACACCTGTCCAAAAGTTCACACCATC...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCAGATGGTGTGAACTTTTaGACAGGTGTCTTAGACACA +
Preference number: 4 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAADGVNF*TGVLDT
Trigger: TGTGTCTAAGACACCTGTCCAAAAGTTCACACCATC...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATGGCACATCAGTTGGATaGTTGCAATTCCAGAACATG +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNGTSVG*LQFQNM
Trigger: CATGTTCTGGAATTGCAACCATCCAACTGATGTGCC...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCGACACATCTTGGAGATaGCTTTCCGAAGGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSDTSWR*LSEGGL
Trigger: GAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTC...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp TTCACTTTGTCCATCACTTCCAACACAACTTGGTCCAAACTGTTCCTTTTGGGGTTCGAATCCAGAGTTTaGGATGGTGCTAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: FTLSITSNTTWSKLFLLGFESRV*DGASTV
Trigger: CACAGTGCTAGCACCATCCCAAACTCTGGATTCGAA...CCCCAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp TGCTGGAGGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTTGCAACAGGGTACCTTaGGGTTCGAATCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: CWRNCFSSFTLSITSNTTCNRVP*GSNPEF
Trigger: AAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCA...AGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAAGTCTCATCCTTGGCTaGATGGGTTTCCGTATTGGT +
Preference number: 4 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALSLILG*MGFRIG
Trigger: ACCAATACGGAAACCCATCCAGCCAAGGATGAGACT...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCCCATGAGATTCTTCTaGAAGAGGCTCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNPMRFF*KRLFLA
Trigger: AGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGG...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTATGCTGTTGTGGTGGTaGAGAAAGCTTCACGAGTCT +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLMLLWW*RKLHES
Trigger: AGACTCGTGAAGCTTTCTCCACCACCACAACAGCAT...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TGCTGGAGGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTTCTCCTAACTGCCCTTaGCAATGTCAAAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: CWRNCFSSFTLSITSNTTSPNCP*QCQSLG
Trigger: TCCCAAGCTTTGACATTGCCAAGGGCAGTTAGGAGA...AGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
3UTR CAA 72 bp AGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTaGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: SVQRNEEMCLRS*CMQLVAALGCG
Trigger: TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
3UTR CAA 72 bp GACAGAATCCTGATGGATGGCACATCAGTTGGATGGTaGCAATTCCAGAACATGTGGGATGGTGTGAACTTT +
Preference number: 4 (lower is better)
Translates to: DRILMDGTSVGW*QFQNMWDGVNF
Trigger: AAAGTTCACACCATCCCACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAGAGGAGTCTCCAAGTTaGTTTCTTCAAAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKEESPS*FLQRRS
Trigger: AGACCTCCTTTGAAGAAATCAACTTGGAGACTCCTC...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCAGTAGATAAACTGTCCTaGTTCCTCAGAAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAAVDKLS*FLRKSF
Trigger: GAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTAC...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTATCCTCACTGTTGCTTTaGACCTCCTCCAAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALSSLLL*TSSKSK
Trigger: TTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGA...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp TGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAAGAAATGAAGAGATGTaGCTAAGGTCTTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: CLRSLCMQLVAALGCGFQRNEEM*LRSLCM
Trigger: CATGCACAAAGACCTTAGGCACATCTCTTCATTTCT...TTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTACTTCTGGAAATGCGTaGATCTTACTTCTCCCATTC +
Preference number: 4 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFTSGNA*ILLLPF
Trigger: GAATGGGAGAAGTAAGATGCACGCATTTCCAGAAGT...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCAAACTGATGTTGCCATaGTTCCTGTACAGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSKLMLP*FLYSLR
Trigger: CCGCAGGCTGTACAGGAAGCATGGCAACATCAGTTT...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCACAAGAACCTGGAAAGTaGCCAAGATGTCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSQEPGK*PRCQAH
Trigger: GTGGGCCTGACATCTTGGGCACTTTCCAGGTTCTTG...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524622.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCAGTCATCTTCAAAGCTaGTCCCATGGCTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSSHLQS*SHGCRS
Trigger: GCTTCTGCAGCCATGGGACCAGCTTTGAAGATGACT...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAGGCACATCAGTTGGATaGTTGCAATTCCAGAACATG +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKGTSVG*LQFQNM
Trigger: CATGTTCTGGAATTGCAACCATCCAACTGATGTGCC...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAGGATGGCACATCAGTTaGATGGTTGCAATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKGWHIS*MVAIPE
Trigger: TTCTGGAATTGCAACCATCCAACTGATGTGCCATCC...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTTGGTCCACAGAATCCTGATGGATaGCACATCAGTTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: GTASLLSLCPSLPTQLGPQNPDG*HISWMV
Trigger: AACCATCCAACTGATGTGCCATCCATCAGGATTCTG...TGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCACTTCCAACACAACTTaGTCCAAACTGTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRTSNTT*SKLFLL
Trigger: CAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGT...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCAACTTCCAACACAACTTaGTCCAAACTGTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAATSNTT*SKLFLL
Trigger: CAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGT...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCATGGATAGGGAGAAGTaGGCAACTTCTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPMDREK*ATSYPQ
Trigger: CTGAGGGTAAGAAGTTGCCCACTTCTCCCTATCCAT...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCGTCTGTGCTCCACTGTaGATCTTCTATGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSVCAPL*IFYGQR
Trigger: TCTCTGCCCATAGAAGATCCACAGTGGAGCACAGAC...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAACCCATGAGATTCTTCTaGAAGAGGCTCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKPMRFF*KRLFLA
Trigger: AGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGG...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCAGACCGACGCAGTTCTaGTCTGTCTACACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSRPTQF*SVYTLL
Trigger: AAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCT...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCAGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAAVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
3UTR CAA 72 bp CAACAGGCCATTTTCACTTCTTTTGTGATTCTCCACTaGCTTCAGGCCATCTGGATGTATACATGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QQAIFTSFVILH*LQAIWMYTCRS
Trigger: TGACCTGCATGTATACATCCAGATGGCCTGAAGCAAGTGGAGAATCACAAAAGAAGTGAAAATGGCCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
3UTR CAA 72 bp GTTGCAATTCCAGAACATGTGGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACACATAGGAGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: VAIPEHVGWCEL*DRCLRHIGVET
Trigger: TGTCTCTACTCCTATGTGTCTAAGACACCTGTCCAAAAGTTCACACCATCCCACATGTTCTGGAATTGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR TCA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCAACATGTGGGATGGTGTaGACTTTTGGACAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKATCGMV*TFGQVS
Trigger: AGACACCTGTCCAAAAGTTCACACCATCCCACATGT...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCACACAGGATCTTCCTGTaGGAATTGCCCCAAATCAGA +
Preference number: 4 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKAHRIFL*ELPQIR
Trigger: TCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTG...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCGTGTCCAAGATGCTCTaGAACCACATACTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSVSKML*NHILPK
Trigger: CTTAGGCAGTATGTGGTTTCAGAGCATCTTGGACAC...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR TCA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCACTTTCCCCTCAGCTTaGCCAAATAGGTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPTFPSA*PNRFLP
Trigger: AGGAAGAAACCTATTTGGTCAAGCTGAGGGGAAAGT...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAGAAGAGGACATCTTCTaGATCTTCTTGCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKEEDIF*IFLHFV
Trigger: GACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTC...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGAAGAGGACATCTTCTaGATCTTCTTGCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALEEDIF*IFLHFV
Trigger: GACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTC...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR GCA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGAAGAGGCTCTTTCTTaGTCTGCTCTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALEEALS*SALSFP
Trigger: TGGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTC...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCAGCTTCACGAGTCTTTaGCAGCAAAAGTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSSFTSL*QQKSGG
Trigger: ACCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCT...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCACCCCATGTACCATGCTaGCTTTCTCCTGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSPHVPC*LSPAEF
Trigger: AAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGG...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATAGAAATGAAGAGATGTaGCTAAGGTCTTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNRNEEM*LRSLCM
Trigger: CATGCACAAAGACCTTAGGCACATCTCTTCATTTCT...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR GCA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGAAGAAATGAAGAGATGTaGCTAAGGTCTTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGRNEEM*LRSLCM
Trigger: CATGCACAAAGACCTTAGGCACATCTCTTCATTTCT...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CCA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTAAATCAGAGTCTTGCTaGAGGAACTGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLKSESC*RNCFSS
Trigger: AGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTT...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CCA 90 bp GGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTTGGTCCAAAATCAGAGTCTTGCTaGAGGAACTGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTASLLSLCPSLPTQLGPKSESC*RNCFSS
Trigger: AGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTT...TGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CCA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCAGAAAGTCTCATCCTTaGCTGGATGGGTTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPRKSHP*LDGFPY
Trigger: ATACGGAAACCCATCCAGCCAAGGATGAGACTTTCT...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR TCA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCATTTAGAGCCAGAAAGTaGGGTGTCCTTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSFRARK*GVLPLF
Trigger: GAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAA...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCAACTGTGGACATCCTCTaGTGTGTTTCCTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSTVDIL*CVSSSQ
Trigger: CTGTGAAGAGGAAACACAGCAGAGGATGTCCACAGT...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR GCA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAAATTTGCCGCAATCCTaGAGCCAGTCTTCAATTTTA +
Preference number: 4 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKNLPQS*SQSSIL
Trigger: TAAAATTGAAGACTGGCTGCAGGATTGCGGCAAATT...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532804.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCCAGAATCCTGATGGATaGCACATCAGTTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSQNPDG*HISWMV
Trigger: AACCATCCAACTGATGTGCCATCCATCAGGATTCTG...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCATTCGAATCCAGAGTTTaGGATGGTGCTAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSFESRV*DGASTV
Trigger: CACAGTGCTAGCACCATCCCAAACTCTGGATTCGAA...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGCATGTGCTCAAGCCCTGTTTATTGACAAAACATTTAACTTCCAGAAAGTCTCATCCTTaGCTGGATGGGTTTCCGTAT +
Preference number: 4 (lower is better)
Translates to: KRALHVLKPCLLTKHLTSRKSHP*LDGFPY
Trigger: ATACGGAAACCCATCCAGCCAAGGATGAGACTTTCT...GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAGCACATGCAGTGCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CCA 90 bp GGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTTGGTCCAGTTTCCTGCAAGAGGTaGCTTTTAGTTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GTASLLSLCPSLPTQLGPVSCKR*LLVSSL
Trigger: CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAAC...TGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR GCA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCAGTAGATAAACTGTCCTaGTTCCTCAGAAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSVDKLS*FLRKSF
Trigger: GAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTAC...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS CCA 90 bp AGTTACGGCTCTGACGGAGCCAGGCCCGCCGTTTCTCCCAGGATGTaGGGCTCAGCACAGAGGCCTCCATGGCCCTGGCTCAGACTTCAG +
Preference number: 5 (lower is better)
Translates to: SYGSDGARPAVSPRM*GSAQRPPWPWLRLQ
Trigger: CTGAAGTCTGAGCCAGGGCCATGGAGGCCTCTGTGCTGAGCCCCACATCCTGGGAGAAACGGCGGGCCTGGCTCCGTCAGAGCCGTAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524668.5
ENST00000533607.1
CDS-3UTR CAA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCGAGAAGAGTTTGCCATaGGCGGCCAGTAGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTEKSLP*AASSVA
Trigger: GGCCACACTACTGGCCGCCAATGGCAAACTCTTCTC...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAGAGAAGAGTTTGCCATaGGCGGCCAGTAGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAEKSLP*AASSVA
Trigger: GGCCACACTACTGGCCGCCAATGGCAAACTCTTCTC...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS TCA 90 bp CGCACCTGGGACTTCAGGAAGAGCTGGAAATCAATGCCCTTGGCCTaGGAGGGGGTGGTGAAAAATCGGGCGGGTATCCGAGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: RTWDFRKSWKSMPLA*EGVVKNRAGIREVS
Trigger: AGACACTTCTCGGATACCCGCCCGATTTTTCACCACCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCTTCCTGAAGTCCCAGGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524959.5
ENST00000526532.5
ENST00000531122.5
ENST00000532757.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTCTCCTGGAGAAGAGTTaGCCATTGGCGGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGALLEKS*PLAASS
Trigger: ACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGAG...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GGTGGTGGTGGCCGGTCTCGGGGGCATGTGTACAGACACATCTTGGAGATGGCTGTGTACAGACACATCTaGGAGATGGCTTTCCGAAGG +
Preference number: 5 (lower is better)
Translates to: GGGGRSRGHVYRHILEMAVYRHI*EMAFRR
Trigger: CCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACAC...AGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACCACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CAA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCAAGTAGGGGCTGGATGTaGAGGGCAGTGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRASRGWM*RAVQFP
Trigger: AGGAAACTGCACTGCCCTCAACATCCAGCCCCTACT...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTCCCCAAATCAGAGTCTaGCTGGAGGAACTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAPQIRV*LEELLL
Trigger: GAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGG...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGTAGGGGCTGGATGTaGAGGGCAGTGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLSRGWM*RAVQFP
Trigger: AGGAAACTGCACTGCCCTCAACATCCAGCCCCTACT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTTTTCTCCTGCAGAGTTaGGGGGTTTGGAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGAFLLQS*GVWRTK
Trigger: CTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAA...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGCACCTCCCCTTTCCTTaGTTCCTCCTGCTCATACCA +
Preference number: 5 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRHLPFP*FLLLIP
Trigger: TGGTATGAGCAGGAGGAACAAAGGAAAGGGGAGGTG...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAAGTGACAGCCAGTGTTaGCACCTGCTTAAACCTGGG +
Preference number: 5 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGSDSQC*HLLKPG
Trigger: CCCAGGTTTAAGCAGGTGCAAACACTGGCTGTCACT...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS GCA 90 bp GTGGTGGTGGAGAAAGCCTCCTCCAAGTCAAAAGTGTCCTGTGGCTaGTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGC +
Preference number: 5 (lower is better)
Translates to: VVVEKASSKSKVSCG*WLKDRRSSGLSTLC
Trigger: GCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTTTGACTTGGAGGAGGCTTTCTCCACCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528240.1
CDS-3UTR CAA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGCTCCTGGAGAAGAGTTaGCCATTGGCGGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKELLEKS*PLAASS
Trigger: ACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGAG...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGTCTTTGTGATCCTCTaGGCCAAAGCCCAGACTGAA +
Preference number: 5 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGVFVIL*AKAQTE
Trigger: TTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGAC...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTAGTGACAGCCAGTGTTaGCACCTGCTTAAACCTGCT +
Preference number: 5 (lower is better)
Translates to: CCLSPAEFGGLEDQGVGASDSQC*HLLKPA
Trigger: AGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCACT...AGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR CAA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCAGTGACAGCCAGTGTTaGCACCTGCTTAAACCTGCT +
Preference number: 5 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGSDSQC*HLLKPA
Trigger: AGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCACT...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGCCCCAAATCAGAGTCTaGCTGGAGGAACTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLPQIRV*LEELLL
Trigger: GAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGG...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGCCCCAAATCAGAGTCTaGCTGGAGGAACTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRPQIRV*LEELLL
Trigger: GAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGG...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGTGCAACAGGGTACCTaGGGGTTCGAATCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEVQQGT*GFESRV
Trigger: AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCAC...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCACAGAAAGTCTCATCCTaGGCTGGATGGGTTTCCGTA +
Preference number: 5 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAQKVSS*AGWVSV
Trigger: TACGGAAACCCATCCAGCCAAGGATGAGACTTTCTG...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGCTCCTCACTGTTGCTTaGCACCTCCTCCAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGLLTVA*HLLQVK
Trigger: TTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCCTCCTCACTGTTGCTTaGCACCTCCTCCAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTLLTVA*HLLQVK
Trigger: TTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGAAGCTTCACGAGTCTTaGCCAGCAAAAGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRKLHES*PAKVWW
Trigger: CCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCTT...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGTCAGACCACATGCTGTaGTGGTGGTGGAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGSDHML*WWWRKL
Trigger: AAGCTTTCTCCACCACCACAACAGCATGTGGTCTGA...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCATGTGCCTAAGGTCTTaGTGCATGCAGCTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTMCLRS*CMQLVA
Trigger: TGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGAATGTGCCTAAGGTCTTaGTGCATGCAGCTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: CLSPAEFGGLEDQGVGAGMCLRS*CMQLVA
Trigger: TGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT...TCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCATCCACCCTAGCCCTTTaGTCTCTGCCTCACTACGTA +
Preference number: 5 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPSTLAL*SLPHYV
Trigger: TACGTAGTGAGGCAGAGACAAAAGGGCTAGGGTGGA...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS GCA 90 bp CCTTCCTCCCAAGAACCTGGAAAGTGCCCAAGATGTCAGGCCCACTaGTGTCTTTTGAGAGTTCCTTTCCCACAAGGGTGGATCCTTCTC +
Preference number: 5 (lower is better)
Translates to: PSSQEPGKCPRCQAH*CLLRVPFPQGWILL
Trigger: GAGAAGGATCCACCCTTGTGGGAAAGGAACTCTCAAAAGACAGCAGTGGGCCTGACATCTTGGGCACTTTCCAGGTTCTTGGGAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524622.5
CDS CCA 90 bp GTGGTGGAGAAAGCCTCCTCCAAGTCAAAAGTGTCCTGTGGCTGCTaGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: VVEKASSKSKVSCGC*LKDRRSSGLSTLCF
Trigger: GAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTTTGACTTGGAGGAGGCTTTCTCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528240.1
CDS-3UTR CAA 90 bp CTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCGATTGGATTCCCTTCTaGGAAAACGTCATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LPMYHAAFLLQSLGVWRTDWIPF*ENVIQA
Trigger: AGCCTGGATGACGTTTTCCAAGAAGGGAATCCAATC...GGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316577.12
ENST00000449076.6
CDS-3UTR CAA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTCTCCTGGAGAAGAGTTaGCCATTGGCGGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSLLEKS*PLAASS
Trigger: ACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGAG...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCTGCTGGAAGCCAAACTACAGCCAAGATCAAGTAGCTGGCAAGGCCTGGCTGGTCTTTGTGATCCTCTaGGCCAAAGCCCAGACTGAA +
Preference number: 5 (lower is better)
Translates to: CCWKPNYSQDQVAGKAWLVFVIL*AKAQTE
Trigger: TTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGAC...CAGCCAGGCCTTGCCAGCTACTTGATCTTGGCTGTAGTTTGGCTTCCAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CAA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACAC +
Preference number: 5 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGGWCEL*DRCLRH
Trigger: GTGTCTAAGACACCTGTCCAAAAGTTCACACCATCC...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGCATGGATGGCACATCAGTaGGATGGTTGCAATTCCAGA +
Preference number: 5 (lower is better)
Translates to: CRVWGFGGPRSRGWMLRAWMAHQ*DGCNSR
Trigger: TCTGGAATTGCAACCATCCAACTGATGTGCCATCCA...TGCCCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTGTGTACAGACACATCTaGGAGATGGCTTTCCGAAGG +
Preference number: 5 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFVYRHI*EMAFRR
Trigger: CCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACAC...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGTGCAACAGGGTACCTaGGGGTTCGAATCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGVQQGT*GFESRV
Trigger: AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCAC...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGATGGGTTTCCGTATaGGTGGCTGGTAGACTACAC +
Preference number: 5 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGGWVSV*VAGRLH
Trigger: GTGTAGTCTACCAGCCACCAATACGGAAACCCATCC...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTTGGGATGGTGCTAGCACTGGGATGGGTTTCCGTATaGGTGGCTGGTAGACTACAC +
Preference number: 5 (lower is better)
Translates to: CNRVPWGSNPEFGMVLALGWVSV*VAGRLH
Trigger: GTGTAGTCTACCAGCCACCAATACGGAAACCCATCC...CAGTGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CAA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGATGGGTTTCCGTATaGGTGGCTGGTAGACTACAC +
Preference number: 5 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFGWVSV*VAGRLH
Trigger: GTGTAGTCTACCAGCCACCAATACGGAAACCCATCC...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGCAGAAAGTCTCATCCTaGGCTGGATGGGTTTCCGTA +
Preference number: 5 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLEQKVSS*AGWVSV
Trigger: TACGGAAACCCATCCAGCCAAGGATGAGACTTTCTG...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCACAGAAAGTCTCATCCTaGGCTGGATGGGTTTCCGTA +
Preference number: 5 (lower is better)
Translates to: SPCTMLPFSCRVWGFGGPQKVSS*AGWVSV
Trigger: TACGGAAACCCATCCAGCCAAGGATGAGACTTTCTG...TGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGGAAGAGGCTCTTTCTaGCTCTGCTCTTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGGRGSF*LCSFFS
Trigger: GGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCC...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGCTCCTCACTGTTGCTTaGCACCTCCTCCAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: LPPHVPCCLSPAEFGGLELLTVA*HLLQVK
Trigger: TTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG...CTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAAGCTTCACGAGTCTTaGCCAGCAAAAGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLKLHES*PAKVWW
Trigger: CCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCTT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTCTCATTCAACTGCTGTaGCCTGCTCAAAAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFLIQLL*PAQKGK
Trigger: CTTCCCCTTTTGAGCAGGCAACAGCAGTTGAATGAG...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR CAA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTTGAGGCAAAGCAGTaGTCGAAGCTGGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGFEAKQ*SKLGRG
Trigger: GCCTCGGCCCAGCTTCGACAACTGCTTTGCCTCAAA...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR CAA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGGGAGGAGTCTCCAAGTaGATTTCTTCAAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRGGVSK*ISSKEV
Trigger: GACCTCCTTTGAAGAAATCAACTTGGAGACTCCTCC...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS TCA 90 bp TCAGGAAGAGCTGGAAATCAATGCCCTTGGCCTGAGAGGGGGTGGTaGAAAATCGGGCGGGTATCCGAGAAGTGTCTTTGTGATCCTCTT +
Preference number: 5 (lower is better)
Translates to: SGRAGNQCPWPERGW*KIGRVSEKCLCDPL
Trigger: AAGAGGATCACAAAGACACTTCTCGGATACCCGCCCGATTTTTCACCACCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCTTCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000524959.5
ENST00000526532.5
ENST00000531122.5
ENST00000532757.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TATCTGAGCTGGGTCTGTGCTCCACTGTGGATCTTCTATGGGCAGAGAATGTGTCTCCTGGAGAAGAGTTaGCCATTGGCGGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: YLSWVCAPLWIFYGQRMCLLEKS*PLAASS
Trigger: ACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGAG...ACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CAA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGACTCCTGGAGAAGAGTTaGCCATTGGCGGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGLLEKS*PLAASS
Trigger: ACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGAG...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACAC +
Preference number: 5 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFGWCEL*DRCLRH
Trigger: GTGTCTAAGACACCTGTCCAAAAGTTCACACCATCC...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGACATCAGTTGGATGGTaGCAATTCCAGAACATGTGG +
Preference number: 5 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGTSVGW*QFQNMW
Trigger: CCACATGTTCTGGAATTGCAACCATCCAACTGATGT...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGTGGATGGCACATCAGTaGGATGGTTGCAATTCCAGA +
Preference number: 5 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRWMAHQ*DGCNSR
Trigger: TCTGGAATTGCAACCATCCAACTGATGTGCCATCCA...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp AGGAGTAGGGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTGGAAGAGGCTCTTTCTaGCTCTGCTCTTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RSRGWMLRAVQFPARGGFGRGSF*LCSFFS
Trigger: GGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCC...AAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCCCTACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGATCAGACCACATGCTGTaGTGGTGGTGGAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGSDHML*WWWRKL
Trigger: AAGCTTTCTCCACCACCACAACAGCATGTGGTCTGA...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp ATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCACTTGTCCCCTAAACTaGATCCTGAAGTCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: MLPFSCRVWGFGGPRSRGTCPLN*ILKSPN
Trigger: GTTAGGAGACTTCAGGATCAAGTTTAGGGGACAAGT...GCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
CDS-3UTR CAA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTCCCCAGAAACTGATGTaGCCATGCTTCCTGTACAGC +
Preference number: 5 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSPQKLM*PCFLYS
Trigger: GCTGTACAGGAAGCATGGCAACATCAGTTTCTGGGG...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGTTTGTGATTCTCCACTaGCTTCAGGCCATCTGGATG +
Preference number: 5 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLFVILH*LQAIWM
Trigger: CATCCAGATGGCCTGAAGCAAGTGGAGAATCACAAA...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp ATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACAC +
Preference number: 5 (lower is better)
Translates to: MYHAAFLLQSLGVWRTKEGWCEL*DRCLRH
Trigger: GTGTCTAAGACACCTGTCCAAAAGTTCACACCATCC...CTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GCCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTGTGTACAGACACATCTaGGAGATGGCTTTCCGAAGG +
Preference number: 5 (lower is better)
Translates to: ALLSLPHYVSDSVCAFSPVYRHI*EMAFRR
Trigger: CCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACAC...AGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAGGATGGGTTTCCGTATaGGTGGCTGGTAGACTACAC +
Preference number: 5 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGGWVSV*VAGRLH
Trigger: GTGTAGTCTACCAGCCACCAATACGGAAACCCATCC...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCAGTAGGGGCTGGATGTaGAGGGCAGTGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRSRGWM*RAVQFP
Trigger: AGGAAACTGCACTGCCCTCAACATCCAGCCCCTACT...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCAGTAGGGGCTGGATGTaGAGGGCAGTGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFSRGWM*RAVQFP
Trigger: AGGAAACTGCACTGCCCTCAACATCCAGCCCCTACT...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp TATCTGAGCTGGGTCTGTGCTCCACTGTGGATCTTCTATGGGCAGAGAATGTGTTTTCTCCTGCAGAGTTaGGGGGTTTGGAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: YLSWVCAPLWIFYGQRMCFLLQS*GVWRTK
Trigger: CTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAA...ACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CAA 90 bp ACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGACTTGTCCCCTAAACTaGATCCTGAAGTCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: TMLPFSCRVWGFGGPRSRTCPLN*ILKSPN
Trigger: GTTAGGAGACTTCAGGATCAAGTTTAGGGGACAAGT...CCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
CDS CCA 90 bp CATGCTTTCTTCCTTTATATCATACAGCCTTCCTCCTGCCACACTTaGTTTCCAAGGCCCAGTCCCAGGTTTGCCTTTAGTGCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: HAFFLYIIQPSSCHT*FPRPSPRFAFSALG
Trigger: CCCTAGAGCACTAAAGGCAAACCTGGGACTGGGCCTTGGAAACCAAGTGTGGCAGGAGGAAGGCTGTATGATATAAAGGAAGAAAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524668.5
CDS-3UTR CAA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAGTCTTTGTGATCCTCTaGGCCAAAGCCCAGACTGAA +
Preference number: 5 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPVFVIL*AKAQTE
Trigger: TTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGAC...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAACATCAGTTGGATGGTaGCAATTCCAGAACATGTGG +
Preference number: 5 (lower is better)
Translates to: SSSPCTMLPFSCRVWGFGTSVGW*QFQNMW
Trigger: CCACATGTTCTGGAATTGCAACCATCCAACTGATGT...TCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGCACTTCCAACACAACTaGGTCCAAACTGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLHFQHN*VQTVPF
Trigger: AAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTG...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGTTCTCTTCTTTCACTTaGTCCATCACTTCCAACACA +
Preference number: 5 (lower is better)
Translates to: PCCLSPAEFGGLEDQGVGFSSFT*SITSNT
Trigger: TGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAA...CCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTGTGCAACAGGGTACCTaGGGGTTCGAATCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSVQQGT*GFESRV
Trigger: AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCAC...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCGTGCAACAGGGTACCTaGGGGTTCGAATCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRVQQGT*GFESRV
Trigger: AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCAC...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCGGATGGGTTTCCGTATaGGTGGCTGGTAGACTACAC +
Preference number: 5 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFGWVSV*VAGRLH
Trigger: GTGTAGTCTACCAGCCACCAATACGGAAACCCATCC...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp TCTATGGGCAGAGAATGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTCTCCTCACTGTTGCTTaGCACCTCCTCCAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: SMGRECVQQGTLGFESRVLLTVA*HLLQVK
Trigger: TTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG...AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CAA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAAGCTTCACGAGTCTTaGCCAGCAAAAGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPKLHES*PAKVWW
Trigger: CCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCTT...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATCAGACCACATGCTGTaGTGGTGGTGGAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGSDHML*WWWRKL
Trigger: AAGCTTTCTCCACCACCACAACAGCATGTGGTCTGA...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TTGCCCCAAATCAGAGTCTTGCTGGAGGAACTGCTTCTCTTCTTTCACTTTGTCAGTAGGGGCTGGATGTaGAGGGCAGTGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LPQIRVLLEELLLFFHFVSRGWM*RAVQFP
Trigger: AGGAAACTGCACTGCCCTCAACATCCAGCCCCTACT...GACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CAA 90 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAAGTAGGGGCTGGATGTaGAGGGCAGTGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: VQRNEEMCLRSLCMQLVASRGWM*RAVQFP
Trigger: AGGAAACTGCACTGCCCTCAACATCCAGCCCCTACT...TGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCTTTCTCCTGCAGAGTTaGGGGGTTTGGAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRFLLQS*GVWRTK
Trigger: CTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAA...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTTCTCCTGCAGAGTTaGGGGGTTTGGAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAAFLLQS*GVWRTK
Trigger: CTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAA...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAATGTGCCTAAGGTCTTaGTGCATGCAGCTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGMCLRS*CMQLVA
Trigger: TGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp GCCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTTTTGTGATTCTCCACTaGCTTCAGGCCATCTGGATG +
Preference number: 5 (lower is better)
Translates to: ALLSLPHYVSDSVCAFSPFVILH*LQAIWM
Trigger: CATCCAGATGGCCTGAAGCAAGTGGAGAATCACAAA...AGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCTCAGACCACATGCTGTaGTGGTGGTGGAGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFSDHML*WWWRKP
Trigger: AGGCTTTCTCCACCACCACAACAGCATGTGGTCTGA...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528240.1
CDS-3UTR CAA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGAGCCCACTGCTGTCTTTaGAGAGTTCCTTTCCCACAA +
Preference number: 5 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGAHCCL*RVPFPQ
Trigger: TTGTGGGAAAGGAACTCTCAAAAGACAGCAGTGGGC...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524622.5
CDS-3UTR CAA 90 bp ATGGCTGCAGAAGCCATTGTAGATAAACTGTCCTGCTTCCTCAGAAAATCCTTCCTCCTGGAGAAGAGTTaGCCATTGGCGGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: MAAEAIVDKLSCFLRKSFLLEKS*PLAASS
Trigger: ACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGAG...GAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTACAATGGCTTCTGCAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CAA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCAGTGACAGCCAGTGTTaGCACCTGCTTAAACCTGCT +
Preference number: 5 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRSDSQC*HLLKPA
Trigger: AGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCACT...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTAGTGACAGCCAGTGTTaGCACCTGCTTAAACCTGCT +
Preference number: 5 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSSDSQC*HLLKPA
Trigger: AGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCACT...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCTATGGGCAGAGAATGTGTGCAACAGGGTACCTTGGGGTTCGAATCCAGAGTTGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACAC +
Preference number: 5 (lower is better)
Translates to: SMGRECVQQGTLGFESRVGWCEL*DRCLRH
Trigger: GTGTCTAAGACACCTGTCCAAAAGTTCACACCATCC...AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CAA 90 bp GGGCTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTACATCAGTTGGATGGTaGCAATTCCAGAACATGTGG +
Preference number: 5 (lower is better)
Translates to: GLDVEGSAVSCKRWLLVSTSVGW*QFQNMW
Trigger: CCACATGTTCTGGAATTGCAACCATCCAACTGATGT...AGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTCACTTCCAACACAACTaGGTCCAAACTGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFHFQHN*VQTVPF
Trigger: AAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTG...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGGGATGGGTTTCCGTATaGGTGGCTGGTAGACTACAC +
Preference number: 5 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLGWVSV*VAGRLH
Trigger: GTGTAGTCTACCAGCCACCAATACGGAAACCCATCC...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAACAGAAAGTCTCATCCTaGGCTGGATGGGTTTCCGTA +
Preference number: 5 (lower is better)
Translates to: CLRSLCMQLVAALGCGFQQKVSS*AGWVSV
Trigger: TACGGAAACCCATCCAGCCAAGGATGAGACTTTCTG...TTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTAAGCTTCACGAGTCTTaGCCAGCAAAAGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSKLHES*PAKVWW
Trigger: CCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCTT...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCAATGTGCCTAAGGTCTTaGTGCATGCAGCTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: QRNEEMCLRSLCMQLVAAMCLRS*CMQLVA
Trigger: TGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT...TGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTATGTGCCTAAGGTCTTaGTGCATGCAGCTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSMCLRS*CMQLVA
Trigger: TGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGCTCAAGCCCTGTTTATaGACAAAACATTTAACTTCC +
Preference number: 5 (lower is better)
Translates to: SCRVWGFGGPRSRGWMLRLKPCL*TKHLTS
Trigger: GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAG...CCTCAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGTCCACCCTAGCCCTTTaGTCTCTGCCTCACTACGTA +
Preference number: 5 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLSTLAL*SLPHYV
Trigger: TACGTAGTGAGGCAGAGACAAAAGGGCTAGGGTGGA...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTGTCTTTGTGATCCTCTaGGCCAAAGCCCAGACTGAA +
Preference number: 5 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFVFVIL*AKAQTE
Trigger: TTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGAC...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGTCTTTGTGATCCTCTaGGCCAAAGCCCAGACTGAA +
Preference number: 5 (lower is better)
Translates to: VQRNEEMCLRSLCMQLVAVFVIL*AKAQTE
Trigger: TTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGAC...TGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTTTGGTCTTTGTGATCCTCTaGGCCAAAGCCCAGACTGAA +
Preference number: 5 (lower is better)
Translates to: DVEGSAVSCKRWLLVSSLVFVIL*AKAQTE
Trigger: TTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGAC...CAAAGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GCTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCTACACTCTGCTTCCATTTCTACATCAGTTGGATGGTaGCAATTCCAGAACATGTGG +
Preference number: 5 (lower is better)
Translates to: AGLKTDAVLVCLHSASISTSVGW*QFQNMW
Trigger: CCACATGTTCTGGAATTGCAACCATCCAACTGATGT...AGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CAA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGAGTGTACAGACACATCTaGGAGATGGCTTTCCGAAGG +
Preference number: 5 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGVYRHI*EMAFRR
Trigger: CCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACAC...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TGGTCTTCCTCCCCATGTACCATGCTGCCTTTCTCCTGCAGAGTTTGGGGGTTTTTCTCTTCTTTCACTTaGTCCATCACTTCCAACACA +
Preference number: 5 (lower is better)
Translates to: WSSSPCTMLPFSCRVWGFFSSFT*SITSNT
Trigger: TGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAA...AAACCCCCAAACTCTGCAGGAGAAAGGCAGCATGGTACATGGGGAGGAAGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAACCCCAAATCAGAGTCTaGCTGGAGGAACTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKPQIRV*LEELLL
Trigger: GAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGG...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGACAGAAAGTCTCATCCTaGGCTGGATGGGTTTCCGTA +
Preference number: 5 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGQKVSS*AGWVSV
Trigger: TACGGAAACCCATCCAGCCAAGGATGAGACTTTCTG...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp CTGGATGTTGAGGGCAGTGCAGTTTCCTGCAAGAGGTGGCTTTTAGTTTCTTCTGGAAGAGGCTCTTTCTaGCTCTGCTCTTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LDVEGSAVSCKRWLLVSSGRGSF*LCSFFS
Trigger: GGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCC...AGAAGAAACTAAAAGCCACCTCTTGCAGGAAACTGCACTGCCCTCAACATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp AAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATCGCGGAAGAGGCTCTTTCTaGCTCTGCTCTTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: KVFVHAACGSIRMWIPNRGRGSF*LCSFFS
Trigger: GGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCC...GCGATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAAAGCTTCACGAGTCTTaGCCAGCAAAAGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VQRNEEMCLRSLCMQLVAKLHES*PAKVWW
Trigger: CCACCAGACTTTTGCTGGCAAAGACTCGTGAAGCTT...TGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATTCAGACCACATGCTGTaGTGGTGGTGGAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNSDHML*WWWRKL
Trigger: AAGCTTTCTCCACCACCACAACAGCATGTGGTCTGA...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTTTTCTCCTGCAGAGTTaGGGGGTTTGGAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLFLLQS*GVWRTK
Trigger: CTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAA...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTATTTCTCCTGCAGAGTTaGGGGGTTTGGAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALFLLQS*GVWRTK
Trigger: CTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAAA...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAACTTGTCCCCTAAACTaGATCCTGAAGTCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPTCPLN*ILKSPN
Trigger: GTTAGGAGACTTCAGGATCAAGTTTAGGGGACAAGT...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
CDS-3UTR CAA 90 bp TTCTCCTGCAGAGTTTGGGGGTTTGGAGGACCAAGGAGTAGGGGCTGGATGTTGAGGAGAAAGTTCATTTaGTTCTTTTGGTATGGGGAA +
Preference number: 5 (lower is better)
Translates to: FSCRVWGFGGPRSRGWMLRRKFI*FFWYGE
Trigger: TTCCCCATACCAAAAGAACAAAATGAACTTTCTCCT...CAACATCCAGCCCCTACTCCTTGGTCCTCCAAACCCCCAAACTCTGCAGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTCCCCAGAAACTGATGTaGCCATGCTTCCTGTACAGC +
Preference number: 5 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLPQKLM*PCFLYS
Trigger: GCTGTACAGGAAGCATGGCAACATCAGTTTCTGGGG...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp CAGGGTCAAGTCATCTTCAAAGCTGGTCCCATGGCTGCAGAAGCCATTGTAGATTCAGTAGTATTTAATTaGCCGCAATCCTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QGQVIFKAGPMAAEAIVDSVVFN*PQSCSQ
Trigger: CTGGCTGCAGGATTGCGGCAAATTAAATACTACTGA...ATCTACAATGGCTTCTGCAGCCATGGGACCAGCTTTGAAGATGACTTGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS TCA 90 bp CCCCAAGCAGTGCCTCACTCAAGTGTGTACATCCTCCCTCGTAGCTaGCCTCAATATATCTTGCTGCAGTTTATCTCAACAAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PQAVPHSSVYILPRS*PQYILLQFISTSFF
Trigger: GAAGAAACTTGTTGAGATAAACTGCAGCAAGATATATTGAGGTCAGCTACGAGGGAGGATGTACACACTTGAGTGAGGCACTGCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524668.5
CDS-3UTR CAA 90 bp AATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGAGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACAC +
Preference number: 5 (lower is better)
Translates to: NEEMCLRSLCMQLVAALGGWCEL*DRCLRH
Trigger: GTGTCTAAGACACCTGTCCAAAAGTTCACACCATCC...TCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAAGTGTACAGACACATCTaGGAGATGGCTTTCCGAAGG +
Preference number: 5 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKVYRHI*EMAFRR
Trigger: CCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACAC...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGACACTTCCAACACAACTaGGTCCAAACTGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: EMCLRSLCMQLVAALGCGHFQHN*VQTVPF
Trigger: AAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTG...TCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCACACTTCCAACACAACTaGGTCCAAACTGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: VPKVFVHAACGSIRMWIPHFQHN*VQTVPF
Trigger: AAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTG...TGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTCTCCTCACTGTTGCTTaGCACCTCCTCCAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLLLTVA*HLLQVK
Trigger: TTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAG...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp ATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCTCAGTAGTATTTAATTaGCCGCAATCCTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: MCLRSLCMQLVAALGCGFSVVFN*PQSCSQ
Trigger: CTGGCTGCAGGATTGCGGCAAATTAAATACTACTGA...GAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532804.5
CDS TCA 90 bp GTATCCGAGAAGTGTCTTTGTGATCCTCTTGGCCAAAGCCCAGACTaGAGAGGACATCTTCTGCATCTTCTTGCACTTTGTCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: VSEKCLCDPLGQSPD*RGHLLHLLALCPEF
Trigger: AAATTCTGGACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGACACTTCTCGGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000524959.5
ENST00000526532.5
ENST00000531122.5
ENST00000532757.5
ENST00000532804.5
ENST00000533446.5
CDS-3UTR CAA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAATGGATGGCACATCAGTaGGATGGTTGCAATTCCAGA +
Preference number: 5 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKWMAHQ*DGCNSR
Trigger: TCTGGAATTGCAACCATCCAACTGATGTGCCATCCA...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTTGGATGGCACATCAGTaGGATGGTTGCAATTCCAGA +
Preference number: 5 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLWMAHQ*DGCNSR
Trigger: TCTGGAATTGCAACCATCCAACTGATGTGCCATCCA...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp CCCTTTTGTCTCTGCCTCACTACGTATCAGACTCAGTTTGTGCCTTCTCCCCTATTCTCTTCTTTCACTTaGTCCATCACTTCCAACACA +
Preference number: 5 (lower is better)
Translates to: PFCLCLTTYQTQFVPSPLFSSFT*SITSNT
Trigger: TGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAA...TAGGGGAGAAGGCACAAACTGAGTCTGATACGTAGTGAGGCAGAGACAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCAGTGCAACAGGGTACCTaGGGGTTCGAATCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKAVQQGT*GFESRV
Trigger: AACTCTGGATTCGAACCCCAAGGTACCCTGTTGCAC...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGGAAGAGGCTCTTTCTaGCTCTGCTCTTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLGRGSF*LCSFFS
Trigger: GGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCC...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000528240.1
ENST00000532804.5
CDS-3UTR CAA 90 bp ACCAGTGTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGGTAGAAAGCTGAGTTaGAGGCAAAGCAGTTGTCGA +
Preference number: 5 (lower is better)
Translates to: TSVQRNEEMCLRSLCMQLGRKLS*RQSSCR
Trigger: TCGACAACTGCTTTGCCTCAAACTCAGCTTTCTACC...AAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTACACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS TCA 90 bp GAAGCAAGTGAGAAAGTATCATGTTGTAGATTATGCCTTTCTCCCTaGACTCATTCAACTGCTGTTGCCTGCTCAAAAGGGGAAGCGGAA +
Preference number: 5 (lower is better)
Translates to: EASEKVSCCRLCLSP*THSTAVACSKGEAE
Trigger: TTCCGCTTCCCCTTTTGAGCAGGCAACAGCAGTTGAATGAGTTCAGGGAGAAAGGCATAATCTACAACATGATACTTTCTCACTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR CAA 90 bp AGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAACATCAGTTGGATGGTaGCAATTCCAGAACATGTGG +
Preference number: 5 (lower is better)
Translates to: RNEEMCLRSLCMQLVAALTSVGW*QFQNMW
Trigger: CCACATGTTCTGGAATTGCAACCATCCAACTGATGT...TAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GTGGTGATTGGATTACTGGGTAGAGTTTTCATTAATCGTTTAGCACCATCTCCCGGAGGAGTCTCCAAGTaGATTTCTTCAAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: VVIGLLGRVFINRLAPSPGGVSK*ISSKEV
Trigger: GACCTCCTTTGAAGAAATCAACTTGGAGACTCCTCC...GGGAGATGGTGCTAAACGATTAATGAAAACTCTACCCAGTAATCCAATCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp GAGCTTCTGAGCCAGAAGAAGGAATTTCACAAAGTAATGTCATCTGTTAAGGCAGATTGGATTCCCTTCTaGGAAAACGTCATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: ELLSQKKEFHKVMSSVKADWIPF*ENVIQA
Trigger: AGCCTGGATGACGTTTTCCAAGAAGGGAATCCAATC...TGCCTTAACAGATGACATTACTTTGTGAAATTCCTTCTTCTGGCTCAGAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS-3UTR CAA 90 bp TCTGCATCTTCTTGCACTTTGTCCAGAATTTCTGAGATGCTTGAACTAGTCTTGGATTGGATTCCCTTCTaGGAAAACGTCATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SASSCTLSRISEMLELVLDWIPF*ENVIQA
Trigger: AGCCTGGATGACGTTTTCCAAGAAGGGAATCCAATC...CAAGACTAGTTCAAGCATCTCAGAAATTCTGGACAAAGTGCAAGAAGATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525978.5
CDS-3UTR CAA 90 bp TTCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTGGTGGAGAAACACTTCCAACACAACTaGGTCCAAACTGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: FFFEANSVRPHAVVVVEKHFQHN*VQTVPF
Trigger: AAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTG...TTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GTACAGAGAAATGAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCATTCTCTTCTTTCACTTaGTCCATCACTTCCAACACA +
Preference number: 5 (lower is better)
Translates to: VQRNEEMCLRSLCMQLVAFSSFT*SITSNT
Trigger: TGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAA...TGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTCATTTCTCTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000532804.5
CDS-3UTR CAA 90 bp GAAGAGATGTGCCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTCTCAAGCCCTGTTTATaGACAAAACATTTAACTTCC +
Preference number: 5 (lower is better)
Translates to: EEMCLRSLCMQLVAALGCLKPCL*TKHLTS
Trigger: GGAAGTTAAATGTTTTGTCAATAAACAGGGCTTGAG...ACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGGCACATCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp CAGGAATATCTTTCTCTAGGACCTGAGAACCACCTCTTTGAAATGTTAACATCATGGATGGCACATCAGTaGGATGGTTGCAATTCCAGA +
Preference number: 5 (lower is better)
Translates to: QEYLSLGPENHLFEMLTSWMAHQ*DGCNSR
Trigger: TCTGGAATTGCAACCATCCAACTGATGTGCCATCCA...TGATGTTAACATTTCAAAGAGGTGGTTCTCAGGTCCTAGAGAAAGATATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp GGAACTGCTTCTCTTCTTTCACTTTGTCCATCACTTCCAACACAACTTGGTCCATTCTCTTCTTTCACTTaGTCCATCACTTCCAACACA +
Preference number: 5 (lower is better)
Translates to: GTASLLSLCPSLPTQLGPFSSFT*SITSNT
Trigger: TGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAA...TGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524923.5
CDS-3UTR CAA 90 bp ATGCTTTTAGAGCCAGAAAGTGAGGTGTCCTTCCTCTCTTCACTTGGGCCTTTTAGGAGAAAGTTCATTTaGTTCTTTTGGTATGGGGAA +
Preference number: 5 (lower is better)
Translates to: MLLEPESEVSFLSSLGPFRRKFI*FFWYGE
Trigger: TTCCCCATACCAAAAGAACAAAATGAACTTTCTCCT...AAAAGGCCCAAGTGAAGAGAGGAAGGACACCTCACTTTCTGGCTCTAAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000449076.6
ENST00000524622.5
CDS-3UTR CAA 90 bp CCTAAGGTCTTTGTGCATGCAGCTTGTGGCAGCATTAGGATGTGGATTCCAAATAAGACAATCTTGTTTTaGTGCTTTTTGCTTCCTACC +
Preference number: 5 (lower is better)
Translates to: PKVFVHAACGSIRMWIPNKTILF*CFLLPT
Trigger: GGTAGGAAGCAAAAAGCACAAAAACAAGATTGTCTT...ATTTGGAATCCACATCCTAATGCTGCCACAAGCTGCATGCACAAAGACCTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524622.5
CDS TCA 90 bp CTTCTTCAGAGTATCCGCAATCCTGCAGCCAGTCTTCAATTTTATTaGTTGGATTCCCTAGAAAAGTCAGACAATAAGCTGCGTCATGAA +
Preference number: 5 (lower is better)
Translates to: LLQSIRNPAASLQFY*LDSLEKSDNKLRHE
Trigger: TTCATGACGCAGCTTATTGTCTGACTTTTCTAGGGAATCCAATCAATAAAATTGAAGACTGGCTGCAGGATTGCGGATACTCTGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533446.5
CDS GCA 90 bp ACTCAAGTGTGTACATCCTCCCTCGTAGCTGACCTCAATATATCTTaGTGCAGTTTATCTCAACAAGTTTCTTCTACAGCTTCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: TQVCTSSLVADLNIS*CSLSQQVSSTASEE
Trigger: TTCTTCAGAAGCTGTAGAAGAAACTTGTTGAGATAAACTGCAGCAAGATATATTGAGGTCAGCTACGAGGGAGGATGTACACACTTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524668.5
ENST00000533607.1
CDS TCA 72 bp TCCTCTTCTAGGACCTGGGTCTGCCAGTTACGGCTCTaGCGGAGCCAGGCCCGCCGTTTCTCCCAGGATGTG +
Preference number: 6 (lower is better)
Translates to: SSSRTWVCQLRL*RSQARRFSQDV
Trigger: CACATCCTGGGAGAAACGGCGGGCCTGGCTCCGTCAGAGCCGTAACTGGCAGACCCAGGTCCTAGAAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524668.5
ENST00000525978.5
ENST00000533607.1
CDS CCA 72 bp AGAAAGCTGAGTTTGAGGCAAAGCAGTTGTCGAAGCTaGGCCGAGGCCTTCACAGGTGTGGGCACAGAGGTG +
Preference number: 6 (lower is better)
Translates to: RKLSLRQSSCRS*AEAFTGVGTEV
Trigger: CACCTCTGTGCCCACACCTGTGAAGGCCTCGGCCCAGCTTCGACAACTGCTTTGCCTCAAACTCAGCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449076.6
ENST00000524668.5
ENST00000533607.1
CDS CAA 90 bp TCCCGTAACAGTAATGCCGTCCTGTCTGCTGGTAGAAAGCTGAGTTaGAGGCAAAGCAGTTGTCGAAGCTGGGCCGAGGCCTTCACAGGT +
Preference number: 6 (lower is better)
Translates to: SRNSNAVLSAGRKLS*RQSSCRSWAEAFTG
Trigger: ACCTGTGAAGGCCTCGGCCCAGCTTCGACAACTGCTTTGCCTCAAACTCAGCTTTCTACCAGCAGACAGGACGGCATTACTGTTACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449076.6
CDS TCA 72 bp GCTGGAAATCAATGCCCTTGGCCTGAGAGGGGGTGGTaGAAAATCGGGCGGGTATCCGAGAAGTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: AGNQCPWPERGW*KIGRVSEKCLC
Trigger: ACAAAGACACTTCTCGGATACCCGCCCGATTTTTCACCACCCCCTCTCAGGCCAAGGGCATTGATTTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000524959.5
ENST00000526532.5
ENST00000531122.5
ENST00000532757.5
ENST00000532804.5
ENST00000533446.5
CDS CAA 72 bp TCGGGCGGGTATCCGAGAAGTGTCTTTGTGATCCTCTaGGCCAAAGCCCAGACTGAAGAGGACATCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SGGYPRSVFVIL*AKAQTEEDIFC
Trigger: GCAGAAGATGTCCTCTTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGACACTTCTCGGATACCCGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000524959.5
ENST00000526532.5
ENST00000531122.5
ENST00000532757.5
ENST00000532804.5
ENST00000533446.5
CDS GCA 72 bp GAGAAAGCCTCCTCCAAGTCAAAAGTGTCCTGTGGCTaGTGGCTTAAAGACCGACGCAGTTCTGGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: EKASSKSKVSCG*WLKDRRSSGLS
Trigger: AGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTTTGACTTGGAGGAGGCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528240.1
CDS CAA 72 bp GGAAAGTGCCCAAGATGTCAGGCCCACTGCTGTCTTTaGAGAGTTCCTTTCCCACAAGGGTGGATCCTTCTC +
Preference number: 6 (lower is better)
Translates to: GKCPRCQAHCCL*RVPFPQGWILL
Trigger: GAGAAGGATCCACCCTTGTGGGAAAGGAACTCTCAAAAGACAGCAGTGGGCCTGACATCTTGGGCACTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524622.5
CDS CAA 90 bp GGTGAAAAATCGGGCGGGTATCCGAGAAGTGTCTTTGTGATCCTCTaGGCCAAAGCCCAGACTGAAGAGGACATCTTCTGCATCTTCTTG +
Preference number: 6 (lower is better)
Translates to: GEKSGGYPRSVFVIL*AKAQTEEDIFCIFL
Trigger: CAAGAAGATGCAGAAGATGTCCTCTTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGACACTTCTCGGATACCCGCCCGATTTTTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000524959.5
ENST00000526532.5
ENST00000531122.5
ENST00000532757.5
ENST00000532804.5
ENST00000533446.5
CDS CAA 90 bp CTAGGGGACATGTATGAGACAGACCTCTCTTCTCTTCTGTCTGTTTaGTACCTATGCCCCAAGCAGTGCCTCACTCAAGTGTGTACATCC +
Preference number: 6 (lower is better)
Translates to: LGDMYETDLSSLLSV*YLCPKQCLTQVCTS
Trigger: GGATGTACACACTTGAGTGAGGCACTGCTTGGGGCATAGGTACAAAACAGACAGAAGAGAAGAGAGGTCTGTCTCATACATGTCCCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524668.5
CDS GCA 72 bp ACAGACCTCTCTTCTCTTCTGTCTGTTTTGTACCTATaGCCCAAGCAGTGCCTCACTCAAGTGTGTACATCC +
Preference number: 6 (lower is better)
Translates to: TDLSSLLSVLYL*PKQCLTQVCTS
Trigger: GGATGTACACACTTGAGTGAGGCACTGCTTGGGGCATAGGTACAAAACAGACAGAAGAGAAGAGAGGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524668.5
CDS GCA 72 bp CATGCTTTCTTCCTTTATATCATACAGCCTTCCTCCTaGCACACTTGGTTTCCAAGGCCCAGTCCCAGGTTT +
Preference number: 6 (lower is better)
Translates to: HAFFLYIIQPSS*HTWFPRPSPRF
Trigger: AAACCTGGGACTGGGCCTTGGAAACCAAGTGTGGCAGGAGGAAGGCTGTATGATATAAAGGAAGAAAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524668.5
CDS CCA 72 bp TTCCTTTATATCATACAGCCTTCCTCCTGCCACACTTaGTTTCCAAGGCCCAGTCCCAGGTTTGCCTTTAGT +
Preference number: 6 (lower is better)
Translates to: FLYIIQPSSCHT*FPRPSPRFAFS
Trigger: ACTAAAGGCAAACCTGGGACTGGGCCTTGGAAACCAAGTGTGGCAGGAGGAAGGCTGTATGATATAAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524668.5
CDS CCA 72 bp TTGAAGCCAATTCTGTCAGACCACATGCTGTTGTGGTaGTGGAGAAAGCCTCCTCCAAGTCAAAAGTGTCCT +
Preference number: 6 (lower is better)
Translates to: LKPILSDHMLLW*WRKPPPSQKCP
Trigger: AGGACACTTTTGACTTGGAGGAGGCTTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528240.1
CDS GCA 72 bp CCCATGGCTGCAGAAGCCATTGTAGATAAACTGTCCTaGTTCCTCAGAAAATCCTTCTTCAGAGTATCCGCA +
Preference number: 6 (lower is better)
Translates to: PMAAEAIVDKLS*FLRKSFFRVSA
Trigger: TGCGGATACTCTGAAGAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTACAATGGCTTCTGCAGCCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316577.12
ENST00000449076.6
ENST00000524622.5
ENST00000524923.5
ENST00000524959.5
ENST00000531122.5
ENST00000532757.5
ENST00000533446.5
CDS CCA 72 bp TCTTTGAAGCCAATTCTGTCAGACCACATGCTGTTGTaGTGGTGGAGAAAGCCTCCTCCAAGTCAAAAGTGT +
Preference number: 6 (lower is better)
Translates to: SLKPILSDHMLL*WWRKPPPSQKC
Trigger: ACACTTTTGACTTGGAGGAGGCTTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528240.1
CDS CAA 72 bp ATGTATGAGACAGACCTCTCTTCTCTTCTGTCTGTTTaGTACCTATGCCCCAAGCAGTGCCTCACTCAAGTG +
Preference number: 6 (lower is better)
Translates to: MYETDLSSLLSV*YLCPKQCLTQV
Trigger: CACTTGAGTGAGGCACTGCTTGGGGCATAGGTACAAAACAGACAGAAGAGAAGAGAGGTCTGTCTCATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524668.5
CDS CAA 72 bp TCTTCTTTGAAGCCAATTCTGTCAGACCACATGCTGTaGTGGTGGTGGAGAAAGCCTCCTCCAAGTCAAAAG +
Preference number: 6 (lower is better)
Translates to: SSLKPILSDHML*WWWRKPPPSQK
Trigger: CTTTTGACTTGGAGGAGGCTTTCTCCACCACCACAACAGCATGTGGTCTGACAGAATTGGCTTCAAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528240.1
CDS TCA 72 bp GTGCCTCACTCAAGTGTGTACATCCTCCCTCGTAGCTaGCCTCAATATATCTTGCTGCAGTTTATCTCAACA +
Preference number: 6 (lower is better)
Translates to: VPHSSVYILPRS*PQYILLQFIST
Trigger: TGTTGAGATAAACTGCAGCAAGATATATTGAGGTCAGCTACGAGGGAGGATGTACACACTTGAGTGAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524668.5
CDS TCA 72 bp CGTCCTCACTCAAGTGTGTACATCCTCCCTCGTAGCTaGCCTCAATATATCTTGCTGCAGTTTATCTCAACA +
Preference number: 6 (lower is better)
Translates to: RPHSSVYILPRS*PQYILLQFIST
Trigger: TGTTGAGATAAACTGCAGCAAGATATATTGAGGTCAGCTACGAGGGAGGATGTACACACTTGAGTGAGGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533607.1
CDS TCA 72 bp TTCAGGGCCTCCCGTAACAGTAATGCCGTCAAGTTCTaGGTTCCAGATGCATGCTTTCTTCCTTTATATCAT +
Preference number: 6 (lower is better)
Translates to: FRASRNSNAVKF*VPDACFLPLYH
Trigger: ATGATATAAAGGAAGAAAGCATGCATCTGGAACTCAGAACTTGACGGCATTACTGTTACGGGAGGCCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316577.12
ENST00000524668.5
CDS GCA 72 bp TGTACATCCTCCCTCGTAGCTGACCTCAATATATCTTaGTGCAGTTTATCTCAACAAGTTTCTTCTACAGCT +
Preference number: 6 (lower is better)
Translates to: CTSSLVADLNIS*CSLSQQVSSTA
Trigger: AGCTGTAGAAGAAACTTGTTGAGATAAACTGCAGCAAGATATATTGAGGTCAGCTACGAGGGAGGATGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524668.5
ENST00000533607.1