RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TESK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107140

Ensembl transcript IDs: ENST00000336395.6, ENST00000463897.1, ENST00000467424.5, ENST00000480077.2, ENST00000498522.5, ENST00000620767.4

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTaGTCTGTTCTTACAGGGTGTCCTGAAGGCCAAAGTTGGAGGCCT +
Preference number: 1 (lower is better)
Translates to: EEPVSPSGTGTVQQV*SVLTGCPEGQSWRP
Trigger: AGGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR-3UTR CCA 90 bp ACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCCTGAAGGCCAAAGTTaGAGGCCTGAGACCACGGGC +
Preference number: 2 (lower is better)
Translates to: TGRRAGQPIWNWHCPASVPEGQS*RPETTG
Trigger: GCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGG...CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR-3UTR GCA 90 bp AGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGTGTCCCTTGAGTCCATaGTGGGGCTCCCCTACACGG +
Preference number: 2 (lower is better)
Translates to: SLMCQQCCVWFSDPHGNACPLSP*WGSPTR
Trigger: CCGTGTAGGGGAGCCCCAGCATGGACTCAAGGGACA...CGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR-3UTR CCA 90 bp CCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACACCTGAAGGCCAAAGTTaGAGGCCTGAGACCACGGGC +
Preference number: 2 (lower is better)
Translates to: PVSPSGTGTVQQVCSVLTPEGQS*RPETTG
Trigger: GCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGG...TGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR-3UTR CCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCCAGCCCATCTGGAACTaGCACTGTCCAGCAAGTGTG +
Preference number: 2 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASQPIWN*HCPASV
Trigger: CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTG...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR-3UTR GCA 90 bp ATAATTGCACGTGTTAGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATTGTCCCTTGAGTCCATaGTGGGGCTCCCCTACACGG +
Preference number: 2 (lower is better)
Translates to: IIARVSLMCQQCCVWFSDCPLSP*WGSPTR
Trigger: CCGTGTAGGGGAGCCCCAGCATGGACTCAAGGGACA...ATCACTGAACCAGACACAGCATTGCTGACACATGAGACTAACACGTGCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR-3UTR TCA 90 bp ATAATTGCACGTGTTAGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATTCTTACAGGGTGTCCTaGAGGCCAAAGTTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: IIARVSLMCQQCCVWFSDSYRVS*RPKLEA
Trigger: GGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAGA...ATCACTGAACCAGACACAGCATTGCTGACACATGAGACTAACACGTGCAATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR CCA 72 bp GGTCGACTGGAAGTGCTCTGTCCCTTGAGTCCATGCTaGGGCTCCCCTACACGGGGAGAAGAGCCGGTCAGC +
Preference number: 3 (lower is better)
Translates to: GRLEVLCPLSPC*GSPTRGEEPVS
Trigger: GCTGACCGGCTCTTCTCCCCGTGTAGGGGAGCCCCAGCATGGACTCAAGGGACAGAGCACTTCCAGTCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR CCA 72 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTaGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCT +
Preference number: 3 (lower is better)
Translates to: LPYTGRRAGQPI*NWHCPASVLCS
Trigger: AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR CCA 72 bp GCACGTGTTAGTCTCATGTGTCAGCAATGCTGTGTCTaGTTCAGTGATCCCCACGGGAACGCGAGCCGGGGG +
Preference number: 3 (lower is better)
Translates to: ARVSLMCQQCCV*FSDPHGNASRG
Trigger: CCCCCGGCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAGACTAACACGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR CCA 72 bp TACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTaGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGG +
Preference number: 3 (lower is better)
Translates to: YTGRRAGQPIWN*HCPASVLCSYR
Trigger: CCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
3UTR GCA 72 bp GTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTaGTCTGTTCTTACAGGGTGTCCTGAAGGCCAAAGT +
Preference number: 3 (lower is better)
Translates to: VSPSGTGTVQQV*SVLTGCPEGQS
Trigger: ACTTTGGCCTTCAGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAAGGCCGCGCTTGCCATaGGCGCGGGCCCAGCCCGAT +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPRPRLP*ARAQPD
Trigger: ATCGGGCTGGGCCCGCGCCCATGGCAAGCGCGGCCT...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCACGTGCCCCAGGCAGCTaGAGGCTGGGTGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPRAPGS*RLGVGG
Trigger: GCCACCCACACCCAGCCTGCAGCTGCCTGGGGCACG...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGAGGCCGCGCTTGCCATaGGCGCGGGCCCAGCCCGAT +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVRPRLP*ARAQPD
Trigger: ATCGGGCTGGGCCCGCGCCCATGGCAAGCGCGGCCT...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGCGGGCCTGCCTCACATaGCAGGGTCCCCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVRACLT*QGPQGP
Trigger: CGGGCCCTGGGGACCCTGCCATGTGAGGCAGGCCCG...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAAGGCAGCTGGGGCGCTaGCCCTGGAGGTTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPRQLGR*PWRFRL
Trigger: GAGCCGGAACCTCCAGGGCCAGCGCCCCAGCTGCCT...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCGCGTGGTGCCCTCGGTaGCAGAGGAGACTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RGEEPVSPSGTGTVQQVCAWCPR*QRRLPA
Trigger: GGCGGGCAGTCTCCTCTGCCACCGAGGGCACCACGC...GCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCGCTGCAGGCTGGGTGTaGGTGGCTTGGCGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RGEEPVSPSGTGTVQQVCAAGWV*VAWRGA
Trigger: GGCACCACGCCAAGCCACCCACACCCAGCCTGCAGC...GCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCACTCCGGCTCCCGCCCTaGGAATGGAAGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPLRLPP*EWKIRR
Trigger: TCGGCGGATCTTCCATTCTCAGGGCGGGAGCCGGAG...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCGCCCGGGGCAGGCTATaGTGGGCCCGGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFARGRL*WARFQG
Trigger: GCCCTGGAACCGGGCCCAGCATAGCCTGCCCCGGGC...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGGTGGCTTGGCGTGGTaGCCTCGGTGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPGGLAW*PRWQRR
Trigger: TCTCCTCTGCCACCGAGGGCACCACGCCAAGCCACC...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTCGGGCCTGCCTCACATaGCAGGGTCCCCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLRACLT*QGPQGP
Trigger: CGGGCCCTGGGGACCCTGCCATGTGAGGCAGGCCCG...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGGGTGTGGGTGGCTTaGCGTGGTGCCCTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVWVWVA*RGALGG
Trigger: GCCACCGAGGGCACCACGCCAAGCCACCCACACCCA...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCACAGGCAGCTGCAGGCTaGGTGTGGGTGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPQAAAG*VWVAWR
Trigger: ACGCCAAGCCACCCACACCCAGCCTGCAGCTGCCTG...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGGGTGGCTTGGCGTGGTaGCCTCGGTGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVGGLAW*PRWQRR
Trigger: TCTCCTCTGCCACCGAGGGCACCACGCCAAGCCACC...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACCGTGCCCCAGGCAGCTaGAGGCTGGGTGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: AGQPIWNWHCPASVLCSYRAPGS*RLGVGG
Trigger: GCCACCCACACCCAGCCTGCAGCTGCCTGGGGCACG...GTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAAGGGGGCACGGGTGCTaGGTTCCAGGTTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPRGHGC*VPGCSS
Trigger: ACTGCTGCAACCTGGAACCCAGCACCCGTGCCCCCT...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGGCAGGTGTCCCAGGCTaGACCAGGGTCTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVAGVPG*TRVSGV
Trigger: CACTCCGGAGACCCTGGTCCAGCCTGGGACACCTGC...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCGCGTGGTGCCCTCGGTaGCAGAGGAGACTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFAWCPR*QRRLPA
Trigger: GGCGGGCAGTCTCCTCTGCCACCGAGGGCACCACGC...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGCTGCAGGCTGGGTGTaGGTGGCTTGGCGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GEEPVSPSGTGTVQQVCSAAGWV*VAWRGA
Trigger: GGCACCACGCCAAGCCACCCACACCCAGCCTGCAGC...AGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCTGGCTCAGGCAGCTaGTCCAGGATCCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPAGSGS*SRIHSR
Trigger: CCTGGAATGGATCCTGGAGCAGCTGCCTGAGCCAGC...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp ACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCCGGCTCAGGGCTGCTaGCCTCGCACTCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TGRRAGQPIWNWHCPASVPAQGC*PRTPSS
Trigger: AGAAGATGGAGTGCGAGGGCAGCAGCCCTGAGCCGG...CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTGCCCGGGGCAGGCTATaGTGGGCCCGGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPARGRL*WARFQG
Trigger: GCCCTGGAACCGGGCCCAGCATAGCCTGCCCCGGGC...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCGCCGGGGATCTGGCCTaGGAAGCGTGGCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFAGDLA*EAWQRD
Trigger: GTCCCTCTGCCACGCTTCCCAGGCCAGATCCCCGGC...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTTACAGGGTGTCCTGAAGGCCAAAGTTGGAGGCCTGAGACCACGGGCTCCACTGCAGGTGTCCCAGGCTaGACCAGGGTCTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: LTGCPEGQSWRPETTGSTAGVPG*TRVSGV
Trigger: CACTCCGGAGACCCTGGTCCAGCCTGGGACACCTGC...AGTGGAGCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGCTGGGGCGCTGGCCCTaGAGGTTCCGGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSAHLELALSSKCALFLQLGRWP*RFRLRA
Trigger: AGCCCTGAGCCGGAACCTCCAGGGCCAGCGCCCCAG...CTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCGTGGGTGGCTTGGCGTaGTGCCCTCGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASVGGLA*CPRWQR
Trigger: CCTCTGCCACCGAGGGCACCACGCCAAGCCACCCAC...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACGTGGGTGGCTTGGCGTaGTGCCCTCGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AGQPIWNWHCPASVLCSYVGGLA*CPRWQR
Trigger: CCTCTGCCACCGAGGGCACCACGCCAAGCCACCCAC...GTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCCAGGCTGGGTGTGGGTaGCTTGGCGTGGTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASQAGCG*LGVVPS
Trigger: CGAGGGCACCACGCCAAGCCACCCACACCCAGCCTG...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCCGGTCAGCCCATCTaGAACTGGCACTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPAGQPI*NWHCPA
Trigger: TGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGC...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCCACCATGACTTGCCCTaGCTGTCGGTGCCGAACCTT +
Preference number: 4 (lower is better)
Translates to: RGEEPVSPSGTGTVQQVCHHDLP*LSVPNL
Trigger: AAGGTTCGGCACCGACAGTCAGGGCAAGTCATGGTG...GCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp GGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTCACCCACGACAGCGGTaGAGCCTCGATCTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: GEEPVSPSGTGTVQQVCSHPRQR*SLDLPV
Trigger: GACGGGAAGATCGAGGCTTCACCGCTGTCGTGGGTG...AGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTGGGCAGGAAGAGGTCTaGCCGGCTTCGGGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLGQEEV*PASGKP
Trigger: CGGCTTTCCCGAAGCCGGTCAGACCTCTTCCTGCCC...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTGGGCAGGAAGAGGTCTaGCCGGCTTCGGGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: RAGQPIWNWHCPASVLCSGQEEV*PASGKP
Trigger: CGGCTTTCCCGAAGCCGGTCAGACCTCTTCCTGCCC...AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGCTGTGTCTGGTTCAGTaGTCCCCACGGGAACGCGAG +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVLCLVQ*SPRERE
Trigger: CTCGCGTTCCCGTGGGGATCACTGAACCAGACACAG...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCACTTCCCGTAGTGTGTTaGCCCGGTTACTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPLPVVC*PGYWGA
Trigger: AGCTCCCCAGTAACCGGGGCAACACACTACGGGAAG...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCGCCAGGACCTGGCAGTaGTGTCTCCATACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASARTWQ*CLHTAG
Trigger: CCCCGCCGTATGGAGACAGCACTGCCAGGTCCTGGC...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp ACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGGCGTGCAGCTGTCCCTaGTGCACACAGACTCCCATG +
Preference number: 4 (lower is better)
Translates to: TGRRAGQPIWNWHCPASVACSCP*CTQTPM
Trigger: CATGGGAGTCTGTGTGCACCAGGGACAGCTGCACGC...CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTAGGGGGCACGGGTGCTaGGTTCCAGGTTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GEEPVSPSGTGTVQQVCSRGHGC*VPGCSS
Trigger: ACTGCTGCAACCTGGAACCCAGCACCCGTGCCCCCT...AGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTAGGCAGCTGGGGCGCTaGCCCTGGAGGTTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCRQLGR*PWRFRL
Trigger: GAGCCGGAACCTCCAGGGCCAGCGCCCCAGCTGCCT...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTGTAGCGGGCAACAGCTaGTGTGGGGCGGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLVAGNS*CGAGAH
Trigger: ATGTGCCCCCGCCCCACACCAGCTGTTGCCCGCTAC...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGCAGGCTGGGTGTGGGTaGCTTGGCGTGGTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RSAHLELALSSKCALFLQQAGCG*LGVVPS
Trigger: CGAGGGCACCACGCCAAGCCACCCACACCCAGCCTG...CTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTCAGGCAGCTGCAGGCTaGGTGTGGGTGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLQAAAG*VWVAWR
Trigger: ACGCCAAGCCACCCACACCCAGCCTGCAGCTGCCTG...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTTACAGGGTGTCCTGAAGGCCAAAGTTGGAGGCCTGAGACCACGGGCTCCACTCCCTTGAGTCCATGCTaGGGCTCCCCTACACGGGGA +
Preference number: 4 (lower is better)
Translates to: LTGCPEGQSWRPETTGSTPLSPC*GSPTRG
Trigger: TCCCCGTGTAGGGGAGCCCCAGCATGGACTCAAGGG...AGTGGAGCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGATCTTCTCCGCGCAGTaGAAATCGTCCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVIFSAQ*KSSTRA
Trigger: GGCGCGTGTGGACGATTTTCACTGCGCGGAGAAGAT...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGCAGGTACTCGGGCGATaGGCTCACAGAGGACAATCC +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVQVLGR*AHRGQS
Trigger: GGATTGTCCTCTGTGAGCTCATCGCCCGAGTACCTG...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGCTTGCAACAGAGCCCTaGTTGTGTGTCAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVLATEP*LCVRAV
Trigger: GACCGCCCTGACACACAATCAGGGCTCTGTTGCAAG...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCGTCACCAAGGGCAGCTaGGTGGATGGGAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: RGEEPVSPSGTGTVQQVCVTKGS*VDGNGD
Trigger: ATCACCATTCCCATCCACTCAGCTGCCCTTGGTGAC...GCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGTCACCAAGGGCAGCTaGGTGGATGGGAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPVTKGS*VDGNGD
Trigger: ATCACCATTCCCATCCACTCAGCTGCCCTTGGTGAC...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGAAGCCAAAGCTaGAGGGGCCGAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLTGSQS*RGRGSS
Trigger: GCTGCTGCCTCGGCCCCTTCAGCTTTGGCTTCCTGT...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCATGCAGCTGTCCCTGGTaGACACAGACTCCCATGAAC +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPCSCPW*TQTPMN
Trigger: GTTCATGGGAGTCTGTGTGCACCAGGGACAGCTGCA...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCAGAGGGACCCCCTCTTaGAACAGAGCCCTGATTGTG +
Preference number: 4 (lower is better)
Translates to: RGEEPVSPSGTGTVQQVCRGTPS*NRALIV
Trigger: CACAATCAGGGCTCTGTTGCAAGAGGGGGTCCCTCT...GCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTCCGGCTCAGGGCTGCTaGCCTCGCACTCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLPAQGC*PRTPSS
Trigger: AGAAGATGGAGTGCGAGGGCAGCAGCCCTGAGCCGG...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTGTTCCGGCTCAGGGCTaGTGCCCTCGCACTCCATCT +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLVPAQG*CPRTPS
Trigger: AGATGGAGTGCGAGGGCAGCAGCCCTGAGCCGGAAC...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTCCACTGCTAAGAGCGTaGCCCAGGCAGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLPLLRA*PRQLQA
Trigger: AGCCTGCAGCTGCCTGGGGCACGCTCTTAGCAGTGG...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTTGTCCCTTGAGTCCATaGTGGGGCTCCCCTACACGG +
Preference number: 4 (lower is better)
Translates to: GEEPVSPSGTGTVQQVCSCPLSP*WGSPTR
Trigger: CCGTGTAGGGGAGCCCCAGCATGGACTCAAGGGACA...AGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGCCCACCACGGCCAATaGCTCCTTCCTTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GQPIWNWHCPASVLCSYRAHHGQ*LLPCPL
Trigger: GAGGGGGCAAGGAAGGAGCCATTGGCCGTGGTGGGC...CCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp ACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGGAGCAAGAAAGGCAGTaGGCAGTCATCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: TGRRAGQPIWNWHCPASVEQERQ*AVIPHQ
Trigger: CTGGTGGGGGATGACTGCCCACTGCCTTTCTTGCTC...CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACACCTGGTGAGTGGGGCTaGCTCAGGCAGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PVSPSGTGTVQQVCSVLTPGEWG*LRQLLQ
Trigger: CTGGAGCAGCTGCCTGAGCCAGCCCCACTCACCAGG...TGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTGCCGGGGATCTGGCCTaGGAAGCGTGGCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCAGDLA*EAWQRD
Trigger: GTCCCTCTGCCACGCTTCCCAGGCCAGATCCCCGGC...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCGGAAAGCCGGGGATCTaGCCTGGGAAGCGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFGKPGI*PGKRGR
Trigger: TCTGCCACGCTTCCCAGGCCAGATCCCCGGCTTTCC...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTCCAGGGTCTCCGGAGTaGTCACCAAGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RAGQPIWNWHCPASVLCSPGSPE*SPRAAE
Trigger: CTCAGCTGCCCTTGGTGACCACTCCGGAGACCCTGG...AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACCTAGGGGACCAGGGTTaGGAGGCCGAGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: AGQPIWNWHCPASVLCSYLGDQG*EAEEQV
Trigger: CACCTGTTCCTCGGCCTCCCAACCCTGGTCCCCTAG...GTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTCCCAGCCCAGCCTTGTaGGGAGTTCACCACCACAGC +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLPSPAL*GVHHHS
Trigger: GCTGTGGTGGTGAACTCCCCACAAGGCTGGGCTGGG...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACCCCTTGAGTCCATGCTaGGGCTCCCCTACACGGGGA +
Preference number: 4 (lower is better)
Translates to: AGQPIWNWHCPASVLCSYPLSPC*GSPTRG
Trigger: TCCCCGTGTAGGGGAGCCCCAGCATGGACTCAAGGG...GTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCATCATCTTCAGCACCATaGCTTGCCCTGACTGTCGGT +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPSSSAP*LALTVG
Trigger: ACCGACAGTCAGGGCAAGTCATGGTGCTGAAGATGA...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCGGATGTTGGGGTGCCTaGGCCGGTTCATCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFGCWGA*AGSSAA
Trigger: TGCAGCTGATGAACCGGCTCAGGCACCCCAACATCC...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGATGTGAGGTCGCGGTaGAATACACCTTTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPDVRSR*NTPLEC
Trigger: GCACTCCAAAGGTGTATTTCACCGCGACCTCACATC...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGCCAAAGTTGGAGGCCTaGGACCACGGGCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: RSAHLELALSSKCALFLQPKLEA*DHGLHC
Trigger: GCAGTGGAGCCCGTGGTCTCAGGCCTCCAACTTTGG...CTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCAGCCGGTTCATCAGCTaGACTTCCCGTAGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RGEEPVSPSGTGTVQQVCSRFIS*TSRSVL
Trigger: CAACACACTACGGGAAGTGCAGCTGATGAACCGGCT...GCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGCTTAGGATGTTGGGGTaGCTGAGCCGGTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVLRMLG*LSRFIS
Trigger: GCTGATGAACCGGCTCAGGCACCCCAACATCCTAAG...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGTTCCGGCTCAGGGCTaGTGCCCTCGCACTCCATCT +
Preference number: 4 (lower is better)
Translates to: PVSPSGTGTVQQVCSVLTVPAQG*CPRTPS
Trigger: AGATGGAGTGCGAGGGCAGCAGCCCTGAGCCGGAAC...TGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTCCTCACAGTTCAGGTTaGGGTAGCGGGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: GEEPVSPSGTGTVQQVCSPHSSG*GSGQQL
Trigger: CAGCTGTTGCCCGCTACCGCAACCTGAACTGTGAGG...AGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp AGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTGTCCCTTGAGTCCATaGTGGGGCTCCCCTACACGG +
Preference number: 4 (lower is better)
Translates to: RAGQPIWNWHCPASVLCSCPLSP*WGSPTR
Trigger: CCGTGTAGGGGAGCCCCAGCATGGACTCAAGGGACA...AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCGCGTGCAGCTGTCCCTaGTGCACACAGACTCCCATG +
Preference number: 4 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASACSCP*CTQTPM
Trigger: CATGGGAGTCTGTGTGCACCAGGGACAGCTGCACGC...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTGCCCACCACGGCCAATaGCTCCTTCCTTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCAHHGQ*LLPCPL
Trigger: GAGGGGGCAAGGAAGGAGCCATTGGCCGTGGTGGGC...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTCCTGGTGAGTGGGGCTaGCTCAGGCAGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPPGEWG*LRQLLQ
Trigger: CTGGAGCAGCTGCCTGAGCCAGCCCCACTCACCAGG...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGAAAGCCGGGGATCTaGCCTGGGAAGCGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PVSPSGTGTVQQVCSVLTGKPGI*PGKRGR
Trigger: TCTGCCACGCTTCCCAGGCCAGATCCCCGGCTTTCC...TGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGCCAGGGTCTCCGGAGTaGTCACCAAGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GQPIWNWHCPASVLCSYRPGSPE*SPRAAE
Trigger: CTCAGCTGCCCTTGGTGACCACTCCGGAGACCCTGG...CCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTGTAGCGGGCAACAGCTaGTGTGGGGCGGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCVAGNS*CGAGAH
Trigger: ATGTGCCCCCGCCCCACACCAGCTGTTGCCCGCTAC...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp GGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGGATGTTGGGGTGCCTaGGCCGGTTCATCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GQPIWNWHCPASVLCSYRGCWGA*AGSSAA
Trigger: TGCAGCTGATGAACCGGCTCAGGCACCCCAACATCC...CCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGGGTTCAGGGGAGCTaGGCAGCTGTTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: RSAHLELALSSKCALFLQGVQGS*AAVPMS
Trigger: GGACATTGGAACAGCTGCTCAGCTCCCCTGAACCCC...CTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGGTTCAGGGGAGCTaGGCAGCTGTTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PVSPSGTGTVQQVCSVLTGVQGS*AAVPMS
Trigger: GGACATTGGAACAGCTGCTCAGCTCCCCTGAACCCC...TGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCACCCACGACAGCGGTaGAGCCTCGATCTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCHPRQR*SLDLPV
Trigger: GACGGGAAGATCGAGGCTTCACCGCTGTCGTGGGTG...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp GCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACCAGGTACTCGGGCGATaGGCTCACAGAGGACAATCC +
Preference number: 4 (lower is better)
Translates to: AGQPIWNWHCPASVLCSYQVLGR*AHRGQS
Trigger: GGATTGTCCTCTGTGAGCTCATCGCCCGAGTACCTG...GTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCCTTGCAACAGAGCCCTaGTTGTGTGTCAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASLATEP*LCVRAV
Trigger: GACCGCCCTGACACACAATCAGGGCTCTGTTGCAAG...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTATTGAGGACGGGTCCTaGTCTAGGGGACCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RAGQPIWNWHCPASVLCSIEDGS*SRGPGL
Trigger: CAACCCTGGTCCCCTAGATCAGGACCCGTCCTCAAT...AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTACAGGAAGCCAAAGCTaGAGGGGCCGAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPTGSQS*RGRGSS
Trigger: GCTGCTGCCTCGGCCCCTTCAGCTTTGGCTTCCTGT...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCAAAGTTGGAGGCCTaGGACCACGGGCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCPKLEA*DHGLHC
Trigger: GCAGTGGAGCCCGTGGTCTCAGGCCTCCAACTTTGG...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTTACAGGGTGTCCTGAAGGCCAAAGTTGGAGGCCTGAGACCACGGGCTCCACTTTCAGCACCATGACTTaGCCTGACTGTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: LTGCPEGQSWRPETTGSTFSTMT*PDCRCR
Trigger: TCGGCACCGACAGTCAGGGCAAGTCATGGTGCTGAA...AGTGGAGCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTCTTAGGATGTTGGGGTaGCTGAGCCGGTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: GEEPVSPSGTGTVQQVCSLRMLG*LSRFIS
Trigger: GCTGATGAACCGGCTCAGGCACCCCAACATCCTAAG...AGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTTACAGGGTGTCCTGAAGGCCAAAGTTGGAGGCCTGAGACCACGGGCTCCACTGGCCAAAGTCCTCAGTaGGTGGTAGGTAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LTGCPEGQSWRPETTGSTGQSPQ*VVGSQG
Trigger: ACCCTGACTACCTACCACGCACTGAGGACTTTGGCC...AGTGGAGCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCTGCTGGGTTCCAGGTTaGAGCAGTGGATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASCWVPG*SSGWPG
Trigger: TCCTGGCCATCCACTGCTGCAACCTGGAACCCAGCA...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTGCTGGGTTCCAGGTTaGAGCAGTGGATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFCWVPG*SSGWPG
Trigger: TCCTGGCCATCCACTGCTGCAACCTGGAACCCAGCA...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGGCAGAGGAGACTaGCCGCCTCACAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RSAHLELALSSKCALFLQGGRGD*PPHSSG
Trigger: ACCTGAACTGTGAGGCGGGCAGTCTCCTCTGCCACC...CTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTCCACTGCTAAGAGCGTaGCCCAGGCAGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPPLLRA*PRQLQA
Trigger: AGCCTGCAGCTGCCTGGGGCACGCTCTTAGCAGTGG...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp ACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGGGTGAAATACACCTTTaGAGTGCAGGTACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: TGRRAGQPIWNWHCPASVGEIHL*SAGTAG
Trigger: GCCTGCGGTACCTGCACTCCAAAGGTGTATTTCACC...CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACGAGCAAGAAAGGCAGTaGGCAGTCATCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: AGQPIWNWHCPASVLCSYEQERQ*AVIPHQ
Trigger: CTGGTGGGGGATGACTGCCCACTGCCTTTCTTGCTC...GTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp CGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCATCCATTCCAGGTGCTaGGTAATTTCGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RGEEPVSPSGTGTVQQVCIHSRC*VISVKG
Trigger: CCCCTTCACCGAAATTACCCAGCACCTGGAATGGAT...GCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCTAGGGGACCAGGGTTaGGAGGCCGAGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCLGDQG*EAEEQV
Trigger: CACCTGTTCCTCGGCCTCCCAACCCTGGTCCCCTAG...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAATCTTCTCCGCGCAGTaGAAATCGTCCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: PVSPSGTGTVQQVCSVLTIFSAQ*KSSTRA
Trigger: GGCGCGTGTGGACGATTTTCACTGCGCGGAGAAGAT...TGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTCTGTGTCTGGTTCAGTaGTCCCCACGGGAACGCGAG +
Preference number: 4 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPLCLVQ*SPRERE
Trigger: CTCGCGTTCCCGTGGGGATCACTGAACCAGACACAG...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTCAGCACCATGACTTaGCCTGACTGTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFFSTMT*PDCRCR
Trigger: TCGGCACCGACAGTCAGGGCAAGTCATGGTGCTGAA...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTTGCAGCTGTCCCTGGTaGACACAGACTCCCATGAAC +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLCSCPW*TQTPMN
Trigger: GTTCATGGGAGTCTGTGTGCACCAGGGACAGCTGCA...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTAATACACCTTTGGAGTaGAGGTACCGCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLNTPLE*RYRRPR
Trigger: CCGAGGCCTGCGGTACCTGCACTCCAAAGGTGTATT...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCGGCCAAAGTCCTCAGTaGGTGGTAGGTAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFGQSPQ*VVGSQG
Trigger: ACCCTGACTACCTACCACGCACTGAGGACTTTGGCC...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCAGAGGGACCCCCTCTTaGAACAGAGCCCTGATTGTG +
Preference number: 4 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASRGTPS*NRALIV
Trigger: CACAATCAGGGCTCTGTTGCAAGAGGGGGTCCCTCT...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCGAGGCAGGACTGGCTTaGTGGGTGTGTCTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASEAGLA*WVCLRA
Trigger: AGCTCTTAGACACACCCAGCAAGCCAGTCCTGCCTC...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGCCTCACAGTTCAGGTTaGGGTAGCGGGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: RSAHLELALSSKCALFLQPHSSG*GSGQQL
Trigger: CAGCTGTTGCCCGCTACCGCAACCTGAACTGTGAGG...CTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTGGTTGCAGCAGTGGATaGCCAGGAGCAAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RAGQPIWNWHCPASVLCSGCSSG*PGARKA
Trigger: TGCCTTTCTTGCTCCTGGCCATCCACTGCTGCAACC...AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp ACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGGTTCACCACCACAGCTaGGGGATTGTTATTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TGRRAGQPIWNWHCPASVVHHHS*GIVIED
Trigger: GTCCTCAATAACAATCCCCCAGCTGTGGTGGTGAAC...CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTGAAGGCCAAAGTTaGAGGCCTGAGACCACGGGC +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCPEGQS*RPETTG
Trigger: GCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGG...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTCAGCAATGCTGTGTCTaGTTCAGTGATCCCCACGGG +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLQQCCV*FSDPHG
Trigger: CCCGTGGGGATCACTGAACCAGACACAGCATTGCTG...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTCACCATGACTTGCCCTaGCTGTCGGTGCCGAACCTT +
Preference number: 4 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPHHDLP*LSVPNL
Trigger: AAGGTTCGGCACCGACAGTCAGGGCAAGTCATGGTG...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTCATCTTCAGCACCATaGCTTGCCCTGACTGTCGGT +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFSSSAP*LALTVG
Trigger: ACCGACAGTCAGGGCAAGTCATGGTGCTGAAGATGA...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCGATGTGAGGTCGCGGTaGAATACACCTTTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASDVRSR*NTPLEC
Trigger: GCACTCCAAAGGTGTATTTCACCGCGACCTCACATC...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTGTAGTGAGAAGGGGTTaGCTCGAGTCAGATTGTCCC +
Preference number: 4 (lower is better)
Translates to: RAGQPIWNWHCPASVLCSVVRRG*LESDCP
Trigger: GGGACAATCTGACTCGAGTCAACCCCTTCTCACTAC...AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACTACTCTGTAAGAGCGTaGAGCTGTCCCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: AGQPIWNWHCPASVLCSYYSVRA*SCPWCT
Trigger: TGTGCACCAGGGACAGCTGCACGCTCTTACAGAGTA...GTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGAATACACCTTTGGAGTaGAGGTACCGCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RSAHLELALSSKCALFLQNTPLE*RYRRPR
Trigger: CCGAGGCCTGCGGTACCTGCACTCCAAAGGTGTATT...CTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGAGGATCCATTCCAGGTaGTGGGTAATTTCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVRIHSR*WVISVK
Trigger: CTTCACCGAAATTACCCAGCACCTGGAATGGATCCT...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGAGGCAGGACTGGCTTaGTGGGTGTGTCTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PVSPSGTGTVQQVCSVLTEAGLA*WVCLRA
Trigger: AGCTCTTAGACACACCCAGCAAGCCAGTCCTGCCTC...TGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGACTGTCCAGCAAGTGTaGTCTGTTCTTACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVTVQQV*SVLTGC
Trigger: ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGT...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTGGTGAAATACACCTTTaGAGTGCAGGTACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLGEIHL*SAGTAG
Trigger: GCCTGCGGTACCTGCACTCCAAAGGTGTATTTCACC...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGCAGCCCATCTGGAACTaGCACTGTCCAGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SLMCQQCCVWFSDPHGNAQPIWN*HCPASV
Trigger: CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTG...CGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGGTAGTGAGAAGGGGTTaGCTCGAGTCAGATTGTCCC +
Preference number: 4 (lower is better)
Translates to: SLMCQQCCVWFSDPHGNAVVRRG*LESDCP
Trigger: GGGACAATCTGACTCGAGTCAACCCCTTCTCACTAC...CGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTTCTTACAGGGTGTCCTaGAGGCCAAAGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCSYRVS*RPKLEA
Trigger: GGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAGA...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTTCTTACAGGGTGTCCTaGAGGCCAAAGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPSYRVS*RPKLEA
Trigger: GGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAGA...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGTACTCTGTAAGAGCGTaGAGCTGTCCCTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: RSAHLELALSSKCALFLQYSVRA*SCPWCT
Trigger: TGTGCACCAGGGACAGCTGCACGCTCTTACAGAGTA...CTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGCTCATGTGTCAGCAATaGTGTGTCTGGTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVLMCQQ*CVWFSD
Trigger: ATCACTGAACCAGACACAGCATTGCTGACACATGAG...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTGGTTGCAGCAGTGGATaGCCAGGAGCAAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCGCSSG*PGARKA
Trigger: TGCCTTTCTTGCTCCTGGCCATCCACTGCTGCAACC...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCATCCATTCCAGGTGCTaGGTAATTTCGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFIHSRC*VISVKG
Trigger: CCCCTTCACCGAAATTACCCAGCACCTGGAATGGAT...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCGTTCACCACCACAGCTaGGGGATTGTTATTGAGGAC +
Preference number: 4 (lower is better)
Translates to: KSRSAHLELALSSKCALFVHHHS*GIVIED
Trigger: GTCCTCAATAACAATCCCCCAGCTGTGGTGGTGAAC...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGGACAGTTCTTGGATGTaGGGTCGCGGTGAAATACAC +
Preference number: 4 (lower is better)
Translates to: SLMCQQCCVWFSDPHGNADSSWM*GRGEIH
Trigger: GTGTATTTCACCGCGACCTCACATCCAAGAACTGTC...CGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTAGCCGGTTCATCAGCTaGACTTCCCGTAGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPSRFIS*TSRSVL
Trigger: CAACACACTACGGGAAGTGCAGCTGATGAACCGGCT...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR TCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTGACAGTTCTTGGATGTaGGGTCGCGGTGAAATACAC +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCDSSWM*GRGEIH
Trigger: GTGTATTTCACCGCGACCTCACATCCAAGAACTGTC...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp GGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGAGGATCCATTCCAGGTaGTGGGTAATTTCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GQPIWNWHCPASVLCSYRRIHSR*WVISVK
Trigger: CTTCACCGAAATTACCCAGCACCTGGAATGGATCCT...CCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp CCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAACTGTCCAGCAAGTGTaGTCTGTTCTTACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PVSPSGTGTVQQVCSVLTTVQQV*SVLTGC
Trigger: ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGT...TGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp AGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTCTCATGTGTCAGCAATaGTGTGTCTGGTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RAGQPIWNWHCPASVLCSLMCQQ*CVWFSD
Trigger: ATCACTGAACCAGACACAGCATTGCTGACACATGAG...AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTTGTTGCCCCGGTTACTaGGGAGCTTGTTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCCCPGY*GACSSS
Trigger: TGAAGATGAACAAGCTCCCCAGTAACCGGGGCAACA...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp ATAATTGCACGTGTTAGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATGCTGGCTCAGGCAGCTaGTCCAGGATCCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: IIARVSLMCQQCCVWFSDAGSGS*SRIHSR
Trigger: CCTGGAATGGATCCTGGAGCAGCTGCCTGAGCCAGC...ATCACTGAACCAGACACAGCATTGCTGACACATGAGACTAACACGTGCAATTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR GCA 90 bp ATAATTGCACGTGTTAGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATGGTGGCAGAGGAGACTaGCCGCCTCACAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: IIARVSLMCQQCCVWFSDGGRGD*PPHSSG
Trigger: ACCTGAACTGTGAGGCGGGCAGTCTCCTCTGCCACC...ATCACTGAACCAGACACAGCATTGCTGACACATGAGACTAACACGTGCAATTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CCA 90 bp ATAATTGCACGTGTTAGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCAGCAATGCTGTGTCTaGTTCAGTGATCCCCACGGG +
Preference number: 4 (lower is better)
Translates to: IIARVSLMCQQCCVWFSDQQCCV*FSDPHG
Trigger: CCCGTGGGGATCACTGAACCAGACACAGCATTGCTG...ATCACTGAACCAGACACAGCATTGCTGACACATGAGACTAACACGTGCAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS CCA 90 bp TGGAAGATCCGCCGAAGATCCTGGACCCGCCCCCGCCGCGCCGGCTaGCTGGGCCCGGGTGGACGCCGCGCCGCTCCGCTCCGCGCAGGG +
Preference number: 5 (lower is better)
Translates to: WKIRRRSWTRPRRAG*LGPGGRRAAPLRAG
Trigger: CCCTGCGCGGAGCGGAGCGGCGCGGCGTCCACCCGGGCCCAGCCAGCCGGCGCGGCGGGGGCGGGTCCAGGATCTTCGGCGGATCTTCCA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336395.6
CDS CCA 90 bp GGCTCCACTGCTAAGAGCGTGCCCCAGGCAGCTGCAGGCTGGGTGTaGGTGGCTTGGCGTGGTGCCCTCGGTGGCAGAGGAGACTGCCCG +
Preference number: 5 (lower is better)
Translates to: GSTAKSVPQAAAGWV*VAWRGALGGRGDCP
Trigger: CGGGCAGTCTCCTCTGCCACCGAGGGCACCACGCCAAGCCACCCACACCCAGCCTGCAGCTGCCTGGGGCACGCTCTTAGCAGTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 90 bp TTGGAGTGCAGGTACCGCAGGCCTCGGGCAATGTCCAGGGCCAGGTaGAGCCTGACCGGCCAGGACAGGGGTTCAGGGGAGCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LECRYRRPRAMSRAR*SLTGQDRGSGELSS
Trigger: GCTGCTCAGCTCCCCTGAACCCCTGTCCTGGCCGGTCAGGCTCCACCTGGCCCTGGACATTGCCCGAGGCCTGCGGTACCTGCACTCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS GCA 90 bp TGGGTGTGGGTGGCTTGGCGTGGTGCCCTCGGTGGCAGAGGAGACTaGCCGCCTCACAGTTCAGGTTGCGGTAGCGGGCAACAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: WVWVAWRGALGGRGD*PPHSSGCGSGQQLV
Trigger: CACCAGCTGTTGCCCGCTACCGCAACCTGAACTGTGAGGCGGGCAGTCTCCTCTGCCACCGAGGGCACCACGCCAAGCCACCCACACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 90 bp GGCAGCGGCGGGCAGGTGTCCCAGGCTGGACCAGGGTCTCCGGAGTaGTCACCAAGGGCAGCTGAGTGGATGGGAATGGTGATGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GSGGQVSQAGPGSPE*SPRAAEWMGMVMVA
Trigger: TGCCACCATCACCATTCCCATCCACTCAGCTGCCCTTGGTGACCACTCCGGAGACCCTGGTCCAGCCTGGGACACCTGCCCGCCGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS-3UTR CAA 90 bp ACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTGGGTGTGGGTGGCTaGGCGTGGTGCCCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: TGRRAGQPIWNWHCPASVLGVGG*AWCPRW
Trigger: CCACCGAGGGCACCACGCCAAGCCACCCACACCCAG...CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS CCA 90 bp CAGGCTATGCTGGGCCCGGTTCCAGGGCTCCCCAGCCCAGCCTTGTaGGGAGTTCACCACCACAGCTGGGGGATTGTTATTGAGGACGGG +
Preference number: 5 (lower is better)
Translates to: QAMLGPVPGLPSPAL*GVHHHSWGIVIEDG
Trigger: CCCGTCCTCAATAACAATCCCCCAGCTGTGGTGGTGAACTCCCCACAAGGCTGGGCTGGGGAGCCCTGGAACCGGGCCCAGCATAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 90 bp GAGACTGCCCGCCTCACAGTTCAGGTTGCGGTAGCGGGCAACAGCTaGTGTGGGGCGGGGGCACATGGACAGGAAGCCAAAGCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: ETARLTVQVAVAGNS*CGAGAHGQEAKAEG
Trigger: CCCTTCAGCTTTGGCTTCCTGTCCATGTGCCCCCGCCCCACACCAGCTGTTGCCCGCTACCGCAACCTGAACTGTGAGGCGGGCAGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 90 bp GGTCTGACCGGCTTCGGGAAAGCCGGGGATCTGGCCTGGGAAGCGTaGCAGAGGGACCCCCTCTTGCAACAGAGCCCTGATTGTGTGTCA +
Preference number: 5 (lower is better)
Translates to: GLTGFGKAGDLAWEA*QRDPLLQQSPDCVS
Trigger: TGACACACAATCAGGGCTCTGTTGCAAGAGGGGGTCCCTCTGCCACGCTTCCCAGGCCAGATCCCCGGCTTTCCCGAAGCCGGTCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS-3UTR CAA 90 bp ACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGGTGCTGGGTTCCAGGTaGCAGCAGTGGATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TGRRAGQPIWNWHCPASVVLGSR*QQWMAR
Trigger: CCTGGCCATCCACTGCTGCAACCTGGAACCCAGCAC...CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp AGTCTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGCTGGGTGTGGGTGGCTaGGCGTGGTGCCCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: SLMCQQCCVWFSDPHGNALGVGG*AWCPRW
Trigger: CCACCGAGGGCACCACGCCAAGCCACCCACACCCAG...CGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS CCA 90 bp GGTGGGGCAGGAAGGAGTGTGAGGCTCTTACGTTGCAGCAGTGGATaGCCAGGAGCAAGAAAGGCAGTGGGCAGTCATCCCCCACCAGAG +
Preference number: 5 (lower is better)
Translates to: GGAGRSVRLLRCSSG*PGARKAVGSHPPPE
Trigger: CTCTGGTGGGGGATGACTGCCCACTGCCTTTCTTGCTCCTGGCCATCCACTGCTGCAACGTAAGAGCCTCACACTCCTTCCTGCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467424.5
CDS-3UTR CAA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGACTTCCCGTAGTGTGTaGCCCCGGTTACTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVTSRSV*PRLLGS
Trigger: GCTCCCCAGTAACCGGGGCAACACACTACGGGAAGT...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp CTTACAGGGTGTCCTGAAGGCCAAAGTTGGAGGCCTGAGACCACGGGCTCCACTGTGCTGGGTTCCAGGTaGCAGCAGTGGATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LTGCPEGQSWRPETTGSTVLGSR*QQWMAR
Trigger: CCTGGCCATCCACTGCTGCAACCTGGAACCCAGCAC...AGTGGAGCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp GCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACCTCCCCAGCCCAGCCTaGTGGGGAGTTCACCACCAC +
Preference number: 5 (lower is better)
Translates to: AGQPIWNWHCPASVLCSYLPSPA*WGVHHH
Trigger: GTGGTGGTGAACTCCCCACAAGGCTGGGCTGGGGAG...GTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp AGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTCTCCCCAGCCCAGCCTaGTGGGGAGTTCACCACCAC +
Preference number: 5 (lower is better)
Translates to: RAGQPIWNWHCPASVLCSLPSPA*WGVHHH
Trigger: GTGGTGGTGAACTCCCCACAAGGCTGGGCTGGGGAG...AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS CCA 90 bp GGGTTCCAGGTTGCAGCAGTGGATGGCCAGGAGCAAGAAAGGCAGTaGGCAGTCATCCCCCACCAGAGTTCGGAAAGCAGGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: GFQVAAVDGQEQERQ*AVIPHQSSESRHIQ
Trigger: CTGGATGTGCCTGCTTTCCGAACTCTGGTGGGGGATGACTGCCCACTGCCTTTCTTGCTCCTGGCCATCCACTGCTGCAACCTGGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336395.6
ENST00000480077.2
ENST00000498522.5
ENST00000620767.4
CDS-3UTR CAA 90 bp CTCCCCTACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGGTGTGTCTAAGAGCTaGATCTTGCCACCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: LPYTGRRAGQPIWNWHCPGVSKS*ILPPLR
Trigger: CCTCAGGGGTGGCAAGATCAAGCTCTTAGACACACC...TGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGTAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp CTCATGTGTCAGCAATGCTGTGTCTGGTTCAGTGATCCCCACGGGAACGCGAGCTCTAGGGGACCAGGGTaGGGAGGCCGAGGAACAGGT +
Preference number: 5 (lower is better)
Translates to: LMCQQCCVWFSDPHGNASSRGPG*GGRGTG
Trigger: ACCTGTTCCTCGGCCTCCCAACCCTGGTCCCCTAGA...GCTCGCGTTCCCGTGGGGATCACTGAACCAGACACAGCATTGCTGACACATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS TCA 90 bp GGAGTTCACCACCACAGCTGGGGGATTGTTATTGAGGACGGGTCCTaGTCTAGGGGACCAGGGTTGGGAGGCCGAGGAACAGGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: GVHHHSWGIVIEDGS*SRGPGLGGRGTGAD
Trigger: ATCAGCACCTGTTCCTCGGCCTCCCAACCCTGGTCCCCTAGATCAGGACCCGTCCTCAATAACAATCCCCCAGCTGTGGTGGTGAACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS TCA 90 bp CCTCAGTGCGTGGTAGGTAGTCAGGGTCTGCAGGTACTCGGGCGATaGGCTCACAGAGGACAATCCCGAAGGCAAAGACATCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PQCVVGSQGLQVLGR*AHRGQSRRQRHQPG
Trigger: CCCAGGCTGATGTCTTTGCCTTCGGGATTGTCCTCTGTGAGCTCATCGCCCGAGTACCTGCAGACCCTGACTACCTACCACGCACTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480077.2
CDS CCA 90 bp CAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTGAAGGCCAAAGTTaGAGGCCTGAGACCACGGGCTCCACTGCTAAGAGCGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: QQVCSVLTGCPEGQS*RPETTGSTAKSVPQ
Trigger: CTGGGGCACGCTCTTAGCAGTGGAGCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAGAACAGAGCACACTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 90 bp GGCTCTTACGTTGCAGCAGTGGATGGCCAGGAGCAAGAAAGGCAGTaGGCAGTCATCCCCCACCAGAGTTCGGAAAGCAGGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: GSYVAAVDGQEQERQ*AVIPHQSSESRHIQ
Trigger: CTGGATGTGCCTGCTTTCCGAACTCTGGTGGGGGATGACTGCCCACTGCCTTTCTTGCTCCTGGCCATCCACTGCTGCAACGTAAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467424.5
CDS-3UTR CAA 90 bp GGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGTCTAGGGGACCAGGGTaGGGAGGCCGAGGAACAGGT +
Preference number: 5 (lower is better)
Translates to: GQPIWNWHCPASVLCSYRSRGPG*GGRGTG
Trigger: ACCTGTTCCTCGGCCTCCCAACCCTGGTCCCCTAGA...CCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS CCA 90 bp GGGGGATTGTTATTGAGGACGGGTCCTGATCTAGGGGACCAGGGTTaGGAGGCCGAGGAACAGGTGCTGATGAAGTTGTCTGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: GGLLLRTGPDLGDQG*EAEEQVLMKLSVAT
Trigger: TGTGGCCACAGACAACTTCATCAGCACCTGTTCCTCGGCCTCCCAACCCTGGTCCCCTAGATCAGGACCCGTCCTCAATAACAATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS-3UTR CAA 90 bp GGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTATGAACCTTAGGATGTaGGGGTGCCTGAGCCGGTTC +
Preference number: 5 (lower is better)
Translates to: GEEPVSPSGTGTVQQVCSMNLRM*GCLSRF
Trigger: GAACCGGCTCAGGCACCCCAACATCCTAAGGTTCAT...AGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCCAGAGGGACCCCCTCTaGCAACAGAGCCCTGATTGT +
Preference number: 5 (lower is better)
Translates to: KSRSAHLELALSSKCALFQRDPL*QQSPDC
Trigger: ACAATCAGGGCTCTGTTGCAAGAGGGGGTCCCTCTG...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTCAGAGGGACCCCCTCTaGCAACAGAGCCCTGATTGT +
Preference number: 5 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLQRDPL*QQSPDC
Trigger: ACAATCAGGGCTCTGTTGCAAGAGGGGGTCCCTCTG...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp ACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCGTAGTGAGAAGGGGTaGACTCGAGTCAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: TGRRAGQPIWNWHCPASVRSEKG*TRVRLS
Trigger: GGACAATCTGACTCGAGTCAACCCCTTCTCACTACG...CACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTCTAAGAGCTTGATCTaGCCACCCCTGAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVSKSLI*PPLRSS
Trigger: GGAAGACCTCAGGGGTGGCAAGATCAAGCTCTTAGA...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp AAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCAGAGGCAGGACTGGCTaGCTGGGTGTGTCTAAGAGC +
Preference number: 5 (lower is better)
Translates to: KSRSAHLELALSSKCALFRGRTG*LGVSKS
Trigger: GCTCTTAGACACACCCAGCAAGCCAGTCCTGCCTCT...GAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp ACACGGGGAGAAGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGGCTGGGGGATTGTTATaGAGGACGGGTCCTGATCTA +
Preference number: 5 (lower is better)
Translates to: TRGEEPVSPSGTGTVQQVAGGLL*RTGPDL
Trigger: TAGATCAGGACCCGTCCTCAATAACAATCCCCCAGC...CACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCTTCTCCCCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS TCA 90 bp CCTCAGTGCGTGGTAGGTAGTCAGGGTCTGCAGGTACTCGGGCGATaGGCTCACAGAGGACAATCCCGAAGGCAAAGACATCAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PQCVVGSQGLQVLGR*AHRGQSRRQRHQPS
Trigger: AGAAGGCTGATGTCTTTGCCTTCGGGATTGTCCTCTGTGAGCTCATCGCCCGAGTACCTGCAGACCCTGACTACCTACCACGCACTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336395.6
ENST00000463897.1
ENST00000467424.5
ENST00000498522.5
ENST00000620767.4
CDS TCA 90 bp ACACAGGAATCTTTTCGGCCAGCCCGAAGTCACCCACGACAGCGGTaGAGCCTCGATCTTCCCGTCGGACTAGACAGTTCTGACACACAC +
Preference number: 5 (lower is better)
Translates to: TQESFRPARSHPRQR*SLDLPVGLDSSDTH
Trigger: GTGTGTGTCAGAACTGTCTAGTCCGACGGGAAGATCGAGGCTTCACCGCTGTCGTGGGTGACTTCGGGCTGGCCGAAAAGATTCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463897.1
ENST00000467424.5
CDS-3UTR CAA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTACTTCCCGTAGTGTGTaGCCCCGGTTACTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPTSRSV*PRLLGS
Trigger: GCTCCCCAGTAACCGGGGCAACACACTACGGGAAGT...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp CTTACAGGGTGTCCTGAAGGCCAAAGTTGGAGGCCTGAGACCACGGGCTCCACTTCTAAGAGCTTGATCTaGCCACCCCTGAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LTGCPEGQSWRPETTGSTSKSLI*PPLRSS
Trigger: GGAAGACCTCAGGGGTGGCAAGATCAAGCTCTTAGA...AGTGGAGCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTGGTGTGTCTAAGAGCTaGATCTTGCCACCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLGVSKS*ILPPLR
Trigger: CCTCAGGGGTGGCAAGATCAAGCTCTTAGACACACC...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACCACAGCTGGGGGATaGTTATTGAGGACGGGTCCT +
Preference number: 5 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLTTAGG*LLRTGP
Trigger: AGGACCCGTCCTCAATAACAATCCCCCAGCTGTGGT...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS TCA 90 bp GTGTGTTGCCCCGGTTACTGGGGAGCTTGTTCATCTTCAGCACCATaGCTTGCCCTGACTGTCGGTGCCGAACCTTGTAGACCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: VCCPGYWGACSSSAP*LALTVGAEPCRPQR
Trigger: TCTCTGAGGTCTACAAGGTTCGGCACCGACAGTCAGGGCAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGGGCAACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS-3UTR CAA 90 bp GAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTCGGTTACTGGGGAGCTaGTTCATCTTCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: EPVSPSGTGTVQQVCSVLRLLGS*FIFSTM
Trigger: CATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCG...AAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp AGAGCCGGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTCGTAGTGAGAAGGGGTaGACTCGAGTCAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: RAGQPIWNWHCPASVLCSRSEKG*TRVRLS
Trigger: GGACAATCTGACTCGAGTCAACCCCTTCTCACTACG...AGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp CCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTCCTAGAGGCAGGACTGGCTaGCTGGGTGTGTCTAAGAGC +
Preference number: 5 (lower is better)
Translates to: PSGTGTVQQVCSVLTGCPRGRTG*LGVSKS
Trigger: GCTCTTAGACACACCCAGCAAGCCAGTCCTGCCTCT...AGGACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS GCA 90 bp AGGCACTTCAATATTGCAACATCATCCAACACTCCAAACACAGGGTaGTACTCAGTCCCTCCGAGCACTCCCCTCACCCTGGTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: RHFNIATSSNTPNTG*YSVPPSTPLTLVPQ
Trigger: TTGGGGGACCAGGGTGAGGGGAGTGCTCGGAGGGACTGAGTAGCACCCTGTGTTTGGAGTGTTGGATGATGTTGCAATATTGAAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467424.5
CDS-3UTR CAA 90 bp GGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGCGGTTACTGGGGAGCTaGTTCATCTTCAGCACCATG +
Preference number: 5 (lower is better)
Translates to: GQPIWNWHCPASVLCSYRRLLGS*FIFSTM
Trigger: CATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCG...CCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp GGTCAGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGCTGGGGGATTGTTATaGAGGACGGGTCCTGATCTA +
Preference number: 5 (lower is better)
Translates to: GQPIWNWHCPASVLCSYRAGGLL*RTGPDL
Trigger: TAGATCAGGACCCGTCCTCAATAACAATCCCCCAGC...CCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS-3UTR CAA 90 bp AGCCCATCTGGAACTGGCACTGTCCAGCAAGTGTGCTCTGTTCTTACAGGGTGTACCACAGCTGGGGGATaGTTATTGAGGACGGGTCCT +
Preference number: 5 (lower is better)
Translates to: SPSGTGTVQQVCSVLTGCTTAGG*LLRTGP
Trigger: AGGACCCGTCCTCAATAACAATCCCCCAGCTGTGGT...ACACCCTGTAAGAACAGAGCACACTTGCTGGACAGTGCCAGTTCCAGATGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336395.6
ENST00000620767.4
CDS GCA 90 bp CCGAGCACTCCCCTCACCCTGGTCCCCCAATATTCTCCAATGCCTTaGCACTCCAACATCCTAATATATCTGTTATCCATATTCCAACAT +
Preference number: 5 (lower is better)
Translates to: PSTPLTLVPQYSPMP*HSNILIYLLSIFQH
Trigger: ATGTTGGAATATGGATAACAGATATATTAGGATGTTGGAGTGGCAAGGCATTGGAGAATATTGGGGGACCAGGGTGAGGGGAGTGCTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467424.5
CDS TCA 72 bp GCCCGATCCCGGGCGCCCGGACTCCGGCTCCCGCCCTaGGAATGGAAGATCCGCCGAAGATCCGCCGCTCCG +
Preference number: 6 (lower is better)
Translates to: ARSRAPGLRLPP*EWKIRRRSAAP
Trigger: CGGAGCGGCGGATCTTCGGCGGATCTTCCATTCTCAGGGCGGGAGCCGGAGTCCGGGCGCCCGGGATCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620767.4
CDS TCA 72 bp GCCCGATCCCGGGCGCCCGGACTCCGGCTCCCGCCCTaGGAATGGAAGATCCGCCGAAGATCCTGGACCCGC +
Preference number: 6 (lower is better)
Translates to: ARSRAPGLRLPP*EWKIRRRSWTR
Trigger: GCGGGTCCAGGATCTTCGGCGGATCTTCCATTCTCAGGGCGGGAGCCGGAGTCCGGGCGCCCGGGATCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336395.6
CDS GCA 72 bp GTGGCTTGGCGTGGTGCCCTCGGTGGCAGAGGAGACTaGCCGCCTCACAGTTCAGGTTGCGGTAGCGGGCAA +
Preference number: 6 (lower is better)
Translates to: VAWRGALGGRGD*PPHSSGCGSGQ
Trigger: TTGCCCGCTACCGCAACCTGAACTGTGAGGCGGGCAGTCTCCTCTGCCACCGAGGGCACCACGCCAAGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 72 bp GGCTTCGGGAAAGCCGGGGATCTGGCCTGGGAAGCGTaGCAGAGGGACCCCCTCTTGCAACAGAGCCCTGAT +
Preference number: 6 (lower is better)
Translates to: GFGKAGDLAWEA*QRDPLLQQSPD
Trigger: ATCAGGGCTCTGTTGCAAGAGGGGGTCCCTCTGCCACGCTTCCCAGGCCAGATCCCCGGCTTTCCCGAAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 72 bp GGGCAGGTGTCCCAGGCTGGACCAGGGTCTCCGGAGTaGTCACCAAGGGCAGCTGAGTGGATGGGAATGGTG +
Preference number: 6 (lower is better)
Translates to: GQVSQAGPGSPE*SPRAAEWMGMV
Trigger: CACCATTCCCATCCACTCAGCTGCCCTTGGTGACCACTCCGGAGACCCTGGTCCAGCCTGGGACACCTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 72 bp GGGCACGGGTGCTGGGTTCCAGGTTGCAGCAGTGGATaGCCAGGAGCAAGAAAGGCAGTGGGCAGTCATCCC +
Preference number: 6 (lower is better)
Translates to: GHGCWVPGCSSG*PGARKAVGSHP
Trigger: GGGATGACTGCCCACTGCCTTTCTTGCTCCTGGCCATCCACTGCTGCAACCTGGAACCCAGCACCCGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336395.6
ENST00000480077.2
ENST00000498522.5
ENST00000620767.4
CDS CCA 72 bp CGCCTCACAGTTCAGGTTGCGGTAGCGGGCAACAGCTaGTGTGGGGCGGGGGCACATGGACAGGAAGCCAAA +
Preference number: 6 (lower is better)
Translates to: RLTVQVAVAGNS*CGAGAHGQEAK
Trigger: TTTGGCTTCCTGTCCATGTGCCCCCGCCCCACACCAGCTGTTGCCCGCTACCGCAACCTGAACTGTGAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CAA 72 bp CAGGGTTGGGAGGCCGAGGAACAGGTGCTGATGAAGTaGTCTGTGGCCACAGCCAGAGGCAGCTGGGGCGCT +
Preference number: 6 (lower is better)
Translates to: QGWEAEEQVLMK*SVATARGSWGA
Trigger: AGCGCCCCAGCTGCCTCTGGCTGTGGCCACAGACAACTTCATCAGCACCTGTTCCTCGGCCTCCCAACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS TCA 72 bp TCAGAGAAGAAGCCGGCCCCGATCTTCTCCGCGCAGTaGAAATCGTCCACACGCGCCAGGCTAGACACGGCG +
Preference number: 6 (lower is better)
Translates to: SEKKPAPIFSAQ*KSSTRARLDTA
Trigger: CGCCGTGTCTAGCCTGGCGCGTGTGGACGATTTTCACTGCGCGGAGAAGATCGGGGCCGGCTTCTTCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 72 bp AGAGCCCTGATTGTGTGTCAGGGCGGTCCTGGTGAGTaGGGCTGGCTCAGGCAGCTGCTCCAGGATCCATTC +
Preference number: 6 (lower is better)
Translates to: RALIVCQGGPGE*GWLRQLLQDPF
Trigger: GAATGGATCCTGGAGCAGCTGCCTGAGCCAGCCCCACTCACCAGGACCGCCCTGACACACAATCAGGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS TCA 72 bp CACCACAGCTGGGGGATTGTTATTGAGGACGGGTCCTaGTCTAGGGGACCAGGGTTGGGAGGCCGAGGAACA +
Preference number: 6 (lower is better)
Translates to: HHSWGIVIEDGS*SRGPGLGGRGT
Trigger: TGTTCCTCGGCCTCCCAACCCTGGTCCCCTAGATCAGGACCCGTCCTCAATAACAATCCCCCAGCTGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CCA 72 bp GTTGCAGCAGTGGATGGCCAGGAGCAAGAAAGGCAGTaGGCAGTCATCCCCCACCAGAGTTCGGAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: VAAVDGQEQERQ*AVIPHQSSESR
Trigger: CCTGCTTTCCGAACTCTGGTGGGGGATGACTGCCCACTGCCTTTCTTGCTCCTGGCCATCCACTGCTGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336395.6
ENST00000467424.5
ENST00000480077.2
ENST00000498522.5
ENST00000620767.4
CDS CCA 72 bp GGTGCTACTCAGTCCCTCCGAGCACTCCCCTCACCCTaGTCCCCCAATATTCTCCAATGCCTTGCCACTCCA +
Preference number: 6 (lower is better)
Translates to: GATQSLRALPSP*SPNILQCLATP
Trigger: TGGAGTGGCAAGGCATTGGAGAATATTGGGGGACCAGGGTGAGGGGAGTGCTCGGAGGGACTGAGTAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467424.5
CDS CAA 90 bp GGTGGCACAAGAGGCAGGACTGGCTTGCTGGGTGTGTCTAAGAGCTaGATCTTGCCACCCCTGAGGTCTTCCCGTAGTGAGAAGGGGTTG +
Preference number: 6 (lower is better)
Translates to: GGTRGRTGLLGVSKS*ILPPLRSSRSEKGL
Trigger: CAACCCCTTCTCACTACGGGAAGACCTCAGGGGTGGCAAGATCAAGCTCTTAGACACACCCAGCAAGCCAGTCCTGCCTCTTGTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS TCA 72 bp TCTTTTCGGCCAGCCCGAAGTCACCCACGACAGCGGTaGAGCCTCGATCTTCCCGTCGGACTAGACAGTTCT +
Preference number: 6 (lower is better)
Translates to: SFRPARSHPRQR*SLDLPVGLDSS
Trigger: AGAACTGTCTAGTCCGACGGGAAGATCGAGGCTTCACCGCTGTCGTGGGTGACTTCGGGCTGGCCGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336395.6
ENST00000463897.1
ENST00000467424.5
ENST00000620767.4
CDS CCA 72 bp GGAAGGAGTGTGAGGCTCTTACGTTGCAGCAGTGGATaGCCAGGAGCAAGAAAGGCAGTGGGCAGTCATCCC +
Preference number: 6 (lower is better)
Translates to: GRSVRLLRCSSG*PGARKAVGSHP
Trigger: GGGATGACTGCCCACTGCCTTTCTTGCTCCTGGCCATCCACTGCTGCAACGTAAGAGCCTCACACTCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467424.5
CDS CCA 72 bp GGCAGGAAGGAGTGTGAGGCTCTTACGTTGCAGCAGTaGATGGCCAGGAGCAAGAAAGGCAGTGGGCAGTCA +
Preference number: 6 (lower is better)
Translates to: GRKECEALTLQQ*MARSKKGSGQS
Trigger: TGACTGCCCACTGCCTTTCTTGCTCCTGGCCATCCACTGCTGCAACGTAAGAGCCTCACACTCCTTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467424.5
CDS CAA 90 bp ATCAGCTGCACTTCCCGTAGTGTGTTGCCCCGGTTACTGGGGAGCTaGTTCATCTTCAGCACCATGACTTGCCCTGACTGTCGGTGCCGA +
Preference number: 6 (lower is better)
Translates to: ISCTSRSVLPRLLGS*FIFSTMTCPDCRCR
Trigger: TCGGCACCGACAGTCAGGGCAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGGGCAACACACTACGGGAAGTGCAGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CAA 72 bp CTGAGCCGGTTCATCAGCTGCACTTCCCGTAGTGTGTaGCCCCGGTTACTGGGGAGCTTGTTCATCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LSRFISCTSRSV*PRLLGSLFIFS
Trigger: GCTGAAGATGAACAAGCTCCCCAGTAACCGGGGCAACACACTACGGGAAGTGCAGCTGATGAACCGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CAA 72 bp AGGACTGGCTTGCTGGGTGTGTCTAAGAGCTTGATCTaGCCACCCCTGAGGTCTTCCCGTAGTGAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: RTGLLGVSKSLI*PPLRSSRSEKG
Trigger: CCCCTTCTCACTACGGGAAGACCTCAGGGGTGGCAAGATCAAGCTCTTAGACACACCCAGCAAGCCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CAA 90 bp ACAAGAGGCAGGACTGGCTTGCTGGGTGTGTCTAAGAGCTTGATCTaGCCACCCCTGAGGTCTTCCCGTAGTGAGAAGGGGTTGACTCGA +
Preference number: 6 (lower is better)
Translates to: TRGRTGLLGVSKSLI*PPLRSSRSEKGLTR
Trigger: TCGAGTCAACCCCTTCTCACTACGGGAAGACCTCAGGGGTGGCAAGATCAAGCTCTTAGACACACCCAGCAAGCCAGTCCTGCCTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS TCA 72 bp CCCGGTTACTGGGGAGCTTGTTCATCTTCAGCACCATaGCTTGCCCTGACTGTCGGTGCCGAACCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: PGYWGACSSSAP*LALTVGAEPCR
Trigger: TCTACAAGGTTCGGCACCGACAGTCAGGGCAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS TCA 72 bp GTGGTAGGTAGTCAGGGTCTGCAGGTACTCGGGCGATaGGCTCACAGAGGACAATCCCGAAGGCAAAGACAT +
Preference number: 6 (lower is better)
Translates to: VVGSQGLQVLGR*AHRGQSRRQRH
Trigger: ATGTCTTTGCCTTCGGGATTGTCCTCTGTGAGCTCATCGCCCGAGTACCTGCAGACCCTGACTACCTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336395.6
ENST00000463897.1
ENST00000467424.5
ENST00000480077.2
ENST00000498522.5
ENST00000620767.4
CDS CCA 72 bp TTATTGAGGACGGGTCCTGATCTAGGGGACCAGGGTTaGGAGGCCGAGGAACAGGTGCTGATGAAGTTGTCT +
Preference number: 6 (lower is better)
Translates to: LLRTGPDLGDQG*EAEEQVLMKLS
Trigger: AGACAACTTCATCAGCACCTGTTCCTCGGCCTCCCAACCCTGGTCCCCTAGATCAGGACCCGTCCTCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS TCA 72 bp GGGGAGCTTGTTCATCTTCAGCACCATGACTTGCCCTaGCTGTCGGTGCCGAACCTTGTAGACCTCAGAGAA +
Preference number: 6 (lower is better)
Translates to: GELVHLQHHDLP*LSVPNLVDLRE
Trigger: TTCTCTGAGGTCTACAAGGTTCGGCACCGACAGTCAGGGCAAGTCATGGTGCTGAAGATGAACAAGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS CAA 72 bp ACTTCCCGTAGTGTGTTGCCCCGGTTACTGGGGAGCTaGTTCATCTTCAGCACCATGACTTGCCCTGACTGT +
Preference number: 6 (lower is better)
Translates to: TSRSVLPRLLGS*FIFSTMTCPDC
Trigger: ACAGTCAGGGCAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGGGCAACACACTACGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336395.6
ENST00000498522.5
ENST00000620767.4
CDS GCA 72 bp AATATTGCAACATCATCCAACACTCCAAACACAGGGTaGTACTCAGTCCCTCCGAGCACTCCCCTCACCCTG +
Preference number: 6 (lower is better)
Translates to: NIATSSNTPNTG*YSVPPSTPLTL
Trigger: CAGGGTGAGGGGAGTGCTCGGAGGGACTGAGTAGCACCCTGTGTTTGGAGTGTTGGATGATGTTGCAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467424.5
CDS CAA 90 bp TCCGAGCACTCCCCTCACCCTGGTCCCCCAATATTCTCCAATGCCTaGCCACTCCAACATCCTAATATATCTGTTATCCATATTCCAACA +
Preference number: 6 (lower is better)
Translates to: SEHSPHPGPPIFSNA*PLQHPNISVIHIPT
Trigger: TGTTGGAATATGGATAACAGATATATTAGGATGTTGGAGTGGCAAGGCATTGGAGAATATTGGGGGACCAGGGTGAGGGGAGTGCTCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467424.5
CDS CAA 72 bp CTCTCTGCTCTCCCAGTTTTTCAAGGCACTTCAATATaGCAACATCATCCAACACTCCAAACACAGGGTGCT +
Preference number: 6 (lower is better)
Translates to: LSALPVFQGTSI*QHHPTLQTQGA
Trigger: AGCACCCTGTGTTTGGAGTGTTGGATGATGTTGCAATATTGAAGTGCCTTGAAAAACTGGGAGAGCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467424.5