RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TERT (Homo sapiens)

Ensembl gene IDs: ENSG00000164362

Ensembl transcript IDs: ENST00000310581.10, ENST00000334602.10, ENST00000460137.6, ENST00000484238.6, ENST00000503656.1, ENST00000656021.1

Found 679 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCCCTaGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTC +
Preference number: 1 (lower is better)
Translates to: DSQRCGPGCGPPLPP*DVEPGVTGLLVSAL
Trigger: GAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR CCA 90 bp CGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTaGGTGTGGGCCGCCCCTCCCTCCCTGGGACGTAGAGCCCGGCGT +
Preference number: 1 (lower is better)
Translates to: RPNTHSGLRLPAVRA*VWAAPPSLGRRARR
Trigger: ACGCCGGGCTCTACGTCCCAGGGAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR GCA 90 bp CGGTGTCGAGTCAGCTTGAGCAGGAATGCTTGGTGGCACAGCCACTaGACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCC +
Preference number: 1 (lower is better)
Translates to: RCRVSLSRNAWWHSH*TASEGRGPAAPLAP
Trigger: GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAAGCTGACTCGACACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR GCA 90 bp ACAGCTCAGGCGGCGGGTCCTGGGCCCGCACACGCAGCACGAAGGTaGGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCACAGAGGCGC +
Preference number: 1 (lower is better)
Translates to: TAQAAGPGPAHAARR*ARPCGYRPGPAQRR
Trigger: GCGCCTCTGTGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCGGGCCCAGGACCCGCCGCCTGAGCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp CCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTaGTCTCGGCCTGGCTGTGGGCGGGTGGCCATCAGTCCAGGATGG +
Preference number: 1 (lower is better)
Translates to: PSLGRRARRDRAAGV*SRPGCGRVAISPGW
Trigger: CCATCCTGGACTGATGGCCACCCGCCCACAGCCAGGCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp GCCGGCAACCCGGCTCCACTGCCGCGCCCAGCCTCCTCTGTTCACTaGTCTGGCCTCGGCGCCTGGAAACCGCGTGTCCATCAAAACGTG +
Preference number: 1 (lower is better)
Translates to: AGNPAPLPRPASSVH*SGLGAWKPRVHQNV
Trigger: CACGTTTTGATGGACACGCGGTTTCCAGGCGCCGAGGCCAGAGCAGTGAACAGAGGAGGCTGGGCGCGGCAGTGGAGCCGGGTTGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp GAGGCCGGGGCGCCGCGCCCGCTCGTAGTTGAGCACGCTGAACAGTaGCTTCACCCTCGAGGTGAGACGCTCGGCCCTCTTTTCTCTGCG +
Preference number: 1 (lower is better)
Translates to: EAGAPRPLVVEHAEQ*LHPRGETLGPLFSA
Trigger: CGCAGAGAAAAGAGGGCCGAGCGTCTCACCTCGAGGGTGAAGGCACTGTTCAGCGTGCTCAACTACGAGCGGGCGCGGCGCCCCGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 90 bp CTGGCTGTGGGCGGGTGGCCATCAGTCCAGGATGGTCTTGAAGTCTaGGGGCAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGT +
Preference number: 1 (lower is better)
Translates to: LAVGGWPSVQDGLEV*GQCRVGCGLQGSQR
Trigger: ACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTGCCCTCAGACTTCAAGACCATCCTGGACTGATGGCCACCCGCCCACAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp TGTGCTTCCAGACACTTCTCCCCATTGCCGGCAACCCGGCTCCACTaGCGCGCCCAGCCTCCTCTGTTCACTGCTCTGGCCTCGGCGCCT +
Preference number: 1 (lower is better)
Translates to: CASRHFSPLPATRLH*RAQPPLFTALASAP
Trigger: AGGCGCCGAGGCCAGAGCAGTGAACAGAGGAGGCTGGGCGCGGCAGTGGAGCCGGGTTGCCGGCAATGGGGAGAAGTGTCTGGAAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp AAGCGGAGTCTGGACGTCAGCAGGGCGGGCCTGGCTTCCCGATGCTaGCTGACCTCTGCTTCCGACAGCTCCCGCAGCTGCACCCTCTTC +
Preference number: 1 (lower is better)
Translates to: KRSLDVSRAGLASRC*LTSASDSSRSCTLF
Trigger: GAAGAGGGTGCAGCTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGCCAGGCCCGCCCTGCTGACGTCCAGACTCCGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp ATGAAGCGGAGTCTGGACGTCAGCAGGGCGGGCCTGGCTTCCCGATaGTGCCTGACCTCTGCTTCCGACAGCTCCCGCAGCTGCACCCTC +
Preference number: 1 (lower is better)
Translates to: MKRSLDVSRAGLASR*CLTSASDSSRSCTL
Trigger: GAGGGTGCAGCTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGCCAGGCCCGCCCTGCTGACGTCCAGACTCCGCTTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 90 bp GGAGTCTGGACGTCAGCAGGGCGGGCCTGGCTTCCCGATGCTGCCTaGCCTCTGCTTCCGACAGCTCCCGCAGCTGCACCCTCTTCAAGT +
Preference number: 1 (lower is better)
Translates to: GVWTSAGRAWLPDAA*PLLPTAPAAAPSSS
Trigger: ACTTGAAGAGGGTGCAGCTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGCCAGGCCCGCCCTGCTGACGTCCAGACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp AGTGCACCAGGCGGGTCTCTGCAGGCACCCTCGCCAGAGCGTCTGTaGTTCCAGACACTTCTCCCCATTGCCGGCAACCCGGCTCCACTG +
Preference number: 1 (lower is better)
Translates to: SAPGGSLQAPSPERL*FQTLLPIAGNPAPL
Trigger: CAGTGGAGCCGGGTTGCCGGCAATGGGGAGAAGTGTCTGGAAGCACAGACGCTCTGGCGAGGGTGCCTGCAGAGACCCGCCTGGTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp CCAGTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTaGGGCCGGAACACAGCCAACCCGGGCCAAGATGACCGCCCTCCT +
Preference number: 1 (lower is better)
Translates to: PVQELGQDLLTQTVL*GRNTANPGQDDRPP
Trigger: AGGAGGGCGGTCATCTTGGCCCGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp GGACGTCAGCAGGGCGGGCCTGGCTTCCCGATGCTGCCTGACCTCTaGTTCCGACAGCTCCCGCAGCTGCACCCTCTTCAAGTGCTGTCT +
Preference number: 1 (lower is better)
Translates to: GRQQGGPGFPMLPDL*FRQLPQLHPLQVLS
Trigger: AGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGCCAGGCCCGCCCTGCTGACGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 90 bp CCCGTCACATCCACCTTGACAAAGTACAGCTCAGGCGGCGGGTCCTaGGCCCGCACACGCAGCACGAAGGTGCGCCAGGCCCTGTGGATA +
Preference number: 1 (lower is better)
Translates to: PVTSTLTKYSSGGGS*ARTRSTKVRQALWI
Trigger: TATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCGGGCCCAGGACCCGCCGCCTGAGCTGTACTTTGTCAAGGTGGATGTGACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 90 bp TCTCCATGTCGCCGTAGCACAGGCTGCAGAGCAGCGTGGAGAGGATaGAGCCCTGCGGGATCCCCTGGCACTGGACGTAGGACTTGCCCC +
Preference number: 1 (lower is better)
Translates to: SPCRRSTGCRAAWRG*SPAGSPGTGRRTCP
Trigger: GGGGCAAGTCCTACGTCCAGTGCCAGGGGATCCCGCAGGGCTCCATCCTCTCCACGCTGCTCTGCAGCCTGTGCTACGGCGACATGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 90 bp CGTAGTCCATGTTCACAATCGGCCGCAGCCCGTCAGGCTTGGGGATaGAGCGGAGTCTGGACGTCAGCAGGGCGGGCCTGGCTTCCCGAT +
Preference number: 1 (lower is better)
Translates to: RSPCSQSAAARQAWG*SGVWTSAGRAWLPD
Trigger: ATCGGGAAGCCAGGCCCGCCCTGCTGACGTCCAGACTCCGCTTCATCCCCAAGCCTGACGGGCTGCGGCCGATTGTGAACATGGACTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 90 bp TCCAGCAGCAGGCCGCACCAGGGGAATAGGCCGTGGGCCGGCATCTaGACAAAAGCCGTGCCACCCAGGGCCTCGTCTTCTACAGGGAAG +
Preference number: 1 (lower is better)
Translates to: SSSRPHQGNRPWAGI*TKAVPPRASSSTGK
Trigger: CTTCCCTGTAGAAGACGAGGCCCTGGGTGGCACGGCTTTTGTTCAGATGCCGGCCCACGGCCTATTCCCCTGGTGCGGCCTGCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp ACACTCGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATaGAGGCCTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCG +
Preference number: 1 (lower is better)
Translates to: TLAQASAGHSAFSRT*RPRPNTHSGLRLPA
Trigger: CGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCGAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR GCA 90 bp GAGTGGCACGTAGGTGACACGGTGTCGAGTCAGCTTGAGCAGGAATaGTTGGTGGCACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCC +
Preference number: 1 (lower is better)
Translates to: EWHVGDTVSSQLEQE*LVAQPLHGLGGQRA
Trigger: GGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAAGCTGACTCGACACCGTGTCACCTACGTGCCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR GCA 90 bp ATCAGCCAGTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTaGTCTGCGGCCGGAACACAGCCAACCCGGGCCAAGATGACCGCC +
Preference number: 1 (lower is better)
Translates to: ISQCRNLARISSRRR*SAAGTQPTRAKMTA
Trigger: GGCGGTCATCTTGGCCCGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp AGGTCTGTCAAGGTAGAGACGTGGCTCTTGAAGGCCTTGCGGACGTaGCCATGGGCGGCCTTCTGGACCACGGCATACCGACGCACGCAG +
Preference number: 1 (lower is better)
Translates to: RSVKVETWLLKALRT*PWAAFWTTAYRRTQ
Trigger: CTGCGTGCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGTCTCTACCTTGACAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp GAATCCCCGCAAACAGCTTGTTCTCCATGTCGCCGTAGCACAGGCTaGAGAGCAGCGTGGAGAGGATGGAGCCCTGCGGGATCCCCTGGC +
Preference number: 1 (lower is better)
Translates to: ESPQTACSPCRRSTG*RAAWRGWSPAGSPG
Trigger: GCCAGGGGATCCCGCAGGGCTCCATCCTCTCCACGCTGCTCTGCAGCCTGTGCTACGGCGACATGGAGAACAAGCTGTTTGCGGGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 90 bp ACGTGGCTCTTGAAGGCCTTGCGGACGTGCCCATGGGCGGCCTTCTaGACCACGGCATACCGACGCACGCAGTACGTGTTCTGGGGTTTG +
Preference number: 1 (lower is better)
Translates to: TWLLKALRTCPWAAF*TTAYRRTQYVFWGL
Trigger: CAAACCCCAGAACACGTACTGCGTGCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 90 bp GTCAAGGTAGAGACGTGGCTCTTGAAGGCCTTGCGGACGTGCCCATaGGCGGCCTTCTGGACCACGGCATACCGACGCACGCAGTACGTG +
Preference number: 1 (lower is better)
Translates to: VKVETWLLKALRTCP*AAFWTTAYRRTQYV
Trigger: CACGTACTGCGTGCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGTCTCTACCTTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 90 bp ACAGCTTGTTCTCCATGTCGCCGTAGCACAGGCTGCAGAGCAGCGTaGAGAGGATGGAGCCCTGCGGGATCCCCTGGCACTGGACGTAGG +
Preference number: 1 (lower is better)
Translates to: TACSPCRRSTGCRAA*RGWSPAGSPGTGRR
Trigger: CCTACGTCCAGTGCCAGGGGATCCCGCAGGGCTCCATCCTCTCCACGCTGCTCTGCAGCCTGTGCTACGGCGACATGGAGAACAAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 90 bp GCGGCCTTCTGGACCACGGCATACCGACGCACGCAGTACGTGTTCTaGGGTTTGATGATGCTGGCGATGACCTCCGTGAGCCTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: AAFWTTAYRRTQYVF*GLMMLAMTSVSLSW
Trigger: CCAGGACAGGCTCACGGAGGTCATCGCCAGCATCATCAAACCCCAGAACACGTACTGCGTGCGTCGGTATGCCGTGGTCCAGAAGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 90 bp TGCTCGATGACGACGGCATCCCTCAGCGGGCTGGTCTCCTGCAGGTaGGCCACGAACTGTCGCATGTACGGCTGGAGGTCTGTCAAGGTA +
Preference number: 1 (lower is better)
Translates to: CSMTTASLSGLVSCR*ATNCRMYGWRSVKV
Trigger: TACCTTGACAGACCTCCAGCCGTACATGCGACAGTTCGTGGCTCACCTGCAGGAGACCAGCCCGCTGAGGGATGCCGTCGTCATCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp CGCACCAGGGGAATAGGCCGTGGGCCGGCATCTGAACAAAAGCCGTaGCACCCAGGGCCTCGTCTTCTACAGGGAAGTTCACCACTGTCT +
Preference number: 1 (lower is better)
Translates to: RTRGIGRGPASEQKP*HPGPRLLQGSSPLS
Trigger: AGACAGTGGTGAACTTCCCTGTAGAAGACGAGGCCCTGGGTGGCACGGCTTTTGTTCAGATGCCGGCCCACGGCCTATTCCCCTGGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 90 bp CCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTaGTCACTCCAAATTCCCAGAGCTCCCAGGGTCCTTCTCAGGGTC +
Preference number: 1 (lower is better)
Translates to: PHPGAGSSPVYRAHL*SLQIPRAPRVLLRV
Trigger: GACCCTGAGAAGGACCCTGGGAGCTCTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR CCA 90 bp CTGCCGCGCCCAGCCTCCTCTGTTCACTGCTCTGGCCTCGGCGCCTaGAAACCGCGTGTCCATCAAAACGTGAAGGTGAACCTCGTAAGT +
Preference number: 1 (lower is better)
Translates to: LPRPASSVHCSGLGA*KPRVHQNVKVNLVS
Trigger: ACTTACGAGGTTCACCTTCACGTTTTGATGGACACGCGGTTTCCAGGCGCCGAGGCCAGAGCAGTGAACAGAGGAGGCTGGGCGCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp CATGCAACAGGCAAGTGGAGAATCAGAGTGCACCAGGCGGGTCTCTaGAGGCACCCTCGCCAGAGCGTCTGTGCTTCCAGACACTTCTCC +
Preference number: 1 (lower is better)
Translates to: HATGKWRIRVHQAGL*RHPRQSVCASRHFS
Trigger: GGAGAAGTGTCTGGAAGCACAGACGCTCTGGCGAGGGTGCCTGCAGAGACCCGCCTGGTGCACTCTGATTCTCCACTTGCCTGTTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp AAACAAGGGAACGAGGACATGCAACAGGCAAGTGGAGAATCAGAGTaGACCAGGCGGGTCTCTGCAGGCACCCTCGCCAGAGCGTCTGTG +
Preference number: 1 (lower is better)
Translates to: KQGNEDMQQASGESE*TRRVSAGTLARASV
Trigger: CACAGACGCTCTGGCGAGGGTGCCTGCAGAGACCCGCCTGGTGCACTCTGATTCTCCACTTGCCTGTTGCATGTCCTCGTTCCCTTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 90 bp TTCTGGGGTTTGATGATGCTGGCGATGACCTCCGTGAGCCTGTCCTaGGGGATGGTGTCGTACGCGCCCGTCACATCCACCTTGACAAAG +
Preference number: 1 (lower is better)
Translates to: FWGLMMLAMTSVSLS*GMVSYAPVTSTLTK
Trigger: CTTTGTCAAGGTGGATGTGACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGCATCATCAAACCCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp GGCCAAGATGACCGCCCTCCTCGTGAGTCTCCACATCTTCATCTGTaGATCATAAGCAGAGGTCCCCGGACGTCGCTAGATGCCATGGAG +
Preference number: 1 (lower is better)
Translates to: GQDDRPPRESPHLHL*IISRGPRTSLDAME
Trigger: CTCCATGGCATCTAGCGACGTCCGGGGACCTCTGCTTATGATGCACAGATGAAGATGTGGAGACTCACGAGGAGGGCGGTCATCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp AAGAAAGACCTGAGCAGCTCGACGACGTACACACTCATCAGCCAGTaGAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTGCG +
Preference number: 1 (lower is better)
Translates to: KKDLSSSTTYTLISQ*RNLARISSRRRCSA
Trigger: CGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCTGATGAGTGTGTACGTCGTCGAGCTGCTCAGGTCTTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp GCTTCCCGATGCTGCCTGACCTCTGCTTCCGACAGCTCCCGCAGCTaGACCCTCTTCAAGTGCTGTCTGATTCCAATGCTTTGCAACTTG +
Preference number: 1 (lower is better)
Translates to: ASRCCLTSASDSSRS*TLFKCCLIPMLCNL
Trigger: CAAGTTGCAAAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 90 bp CACATGGCAACCCAAGAGGTGGTGAGAAACAAGGGAACGAGGACATaGAACAGGCAAGTGGAGAATCAGAGTGCACCAGGCGGGTCTCTG +
Preference number: 1 (lower is better)
Translates to: HMATQEVVRNKGTRT*NRQVENQSAPGGSL
Trigger: CAGAGACCCGCCTGGTGCACTCTGATTCTCCACTTGCCTGTTGCATGTCCTCGTTCCCTTGTTTCTCACCACCTCTTGGGTTGCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 90 bp CAACACACACTCGGCAGGAAACGCACATGGCAACCCAAGAGGTGGTaGGAAACAAGGGAACGAGGACATGCAACAGGCAAGTGGAGAATC +
Preference number: 1 (lower is better)
Translates to: QHTLGRKRTWQPKRW*ETRERGHATGKWRI
Trigger: GATTCTCCACTTGCCTGTTGCATGTCCTCGTTCCCTTGTTTCTCACCACCTCTTGGGTTGCCATGTGCGTTTCCTGCCGAGTGTGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 90 bp GACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATaGGAGCTGCAGCACACATGCGTGAAACCTGTACGCCTGCAGCAG +
Preference number: 1 (lower is better)
Translates to: DAQEKCGVLPNLLMK*ELQHTCVKPVRLQQ
Trigger: CTGCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR TCA 90 bp TCTTGGCTTTCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGAGATaGCGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAA +
Preference number: 1 (lower is better)
Translates to: SWLSGWSSRGRPCQR*RAGKMWGSSKLADE
Trigger: TTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CCA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCCCGCCCCTCCCTCCCTaGGACGTAGAGCCCGGCGTG +
Preference number: 2 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPPPLPP*DVEPGV
Trigger: CACGCCGGGCTCTACGTCCCAGGGAGGGAGGGGCGG...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
78% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp CACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGCGACAGGAAAAGCTGGCCCTaGGGTGGAGCCGAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: HCTASEGRGPAAPLAPSDRKSWP*GGAERQ
Trigger: CTGGCGCTCGGCTCCACCCCAGGGCCAGCTTTTCCT...GTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCTCTTGGCTTTCAGGATaGAGTAGCAGAGGGAGGCCG +
Preference number: 2 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPSWLSG*SSRGRP
Trigger: CGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGA...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR TCA 90 bp TTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCGCGTCTGGGCTGTCCTaGGTGACCCCAGGAGTGGCA +
Preference number: 2 (lower is better)
Translates to: LAAASRAVSVVPGSFRLSASGLS*VTPGVA
Trigger: TGCCACTCCTGGGGTCACTCAGGACAGCCCAGACGC...GCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR GCA 90 bp ACCTCCAGGGTCCGGGTATCCAGCAGCAGGCCGCACCAGGGGAATAGGCCGTGGCAGTGCCGGGTTGGCTaGGGCCTCCAGGGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: TSRVRVSSSRPHQGNRPWQCRVG*GLQGSQ
Trigger: CTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG...CCACGGCCTATTCCCCTGGTGCGGCCTGCTGCTGGATACCCGGACCCTGGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp ACCTCCAGGGTCCGGGTATCCAGCAGCAGGCCGCACCAGGGGAATAGGCCGTGGGGCTGCAGAGCAGCGTaGAGAGGATGGAGCCCTGCG +
Preference number: 2 (lower is better)
Translates to: TSRVRVSSSRPHQGNRPWGCRAA*RGWSPA
Trigger: CGCAGGGCTCCATCCTCTCCACGCTGCTCTGCAGCC...CCACGGCCTATTCCCCTGGTGCGGCCTGCTGCTGGATACCCGGACCCTGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR GCA 90 bp CGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCACAGAGTGGTGGCACAGCCACTaGACGGCCTCGGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: RSTKVRQALWISSRPSTEWWHSH*TASEGR
Trigger: TCTGCCCTCCGAGGCCGTGCAGTGGCTGTGCCACCA...CTCTGTGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CAA 90 bp TGGCACGTAGGTGACACGGTGTCGAGTCAGCTTGAGCAGGAATGCTaGGTGGCACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: WHVGDTVSSQLEQEC*VAQPLHGLGGQRAG
Trigger: GCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAAGCTGACTCGACACCGTGTCACCTACGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR TCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTTCCAGAAACAGGCTGTaGCACTTCAGCCGCAAGACC +
Preference number: 2 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELSRNRL*HFSRKT
Trigger: GGTCTTGCGGCTGAAGTGTCACAGCCTGTTTCTGGA...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR TCA 90 bp GGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAAGTCCAGGATGGTCTTaGAGTCTGAGGGCAGTGCCG +
Preference number: 2 (lower is better)
Translates to: GWLRPPGQSASSPGASDSSPGWS*SLRAVP
Trigger: CGGCACTGCCCTCAGACTTCAAGACCATCCTGGACT...TGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR TCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCCTTCCCGATGCTGCCTaGCCTCTGCTTCCGACAGCT +
Preference number: 2 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPLPDAA*PLLPTA
Trigger: AGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAG...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR GCA 90 bp GGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAAGCTTCCGACTCAGCTaGGTCTGGGCTGTCCTGAGT +
Preference number: 2 (lower is better)
Translates to: GWLRPPGQSASSPGASDSSFRLS*VWAVLS
Trigger: ACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCT...TGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTTTGCGGACGTGCCCATaGGCGGCCTTCTGGACCACG +
Preference number: 2 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTLRTCP*AAFWTT
Trigger: CGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAA...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR TCA 90 bp GGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAAGGCCGTGTCAGAGATaGCGCGCAGGAAAAATGTGG +
Preference number: 2 (lower is better)
Translates to: GWLRPPGQSASSPGASDSRPCQR*RAGKMW
Trigger: CCACATTTTTCCTGCGCGTCATCTCTGACACGGCCT...TGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR TCA 90 bp GCTGGCGATGACCTCCGTGAGCCTGTCCTGGGGGATGGTGTCGTACGCGCCCGTGGTGTCGAGTCAGCTTaGGCAGGAATGCTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: AGDDLREPVLGDGVVRARGVESA*AGMLGG
Trigger: GCCACCAAGCATTCCTGCTCAAGCTGACTCGACACC...ACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR TCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCAGTCCAGGATGGTCTTaGAGTCTGAGGGCAGTGCCG +
Preference number: 2 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPSPGWS*SLRAVP
Trigger: CGGCACTGCCCTCAGACTTCAAGACCATCCTGGACT...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR GCA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAATCAGACTCCCAGCGGTaGGGGCCTGGGTGTGGGCCG +
Preference number: 2 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEESDSQR*GPGCGP
Trigger: CGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGA...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR GCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTAGACCCCAAAGAGTTTaGGACGCATGTTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELRPQRV*DACSSQ
Trigger: CTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCT...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR GCA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGAAATAAAAGCAAATaGCCAGTGACCAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPRNKSK*PVTRRQ
Trigger: TTGCCTCCTGGTCACTGGGCATTTGCTTTTATTTCT...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp GGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAAGCCGCCCCTCCCTCCCTaGGACGTAGAGCCCGGCGTG +
Preference number: 2 (lower is better)
Translates to: GMDYSYVGSGSRAPGEEKPPLPP*DVEPGV
Trigger: CACGCCGGGCTCTACGTCCCAGGGAGGGAGGGGCGG...CTTTTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR CCA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGCTCAGGGTCTCCACCTaGATGGTGGGGGTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWLRVST*MVGVEG
Trigger: GCCTTCCACCCCCACCATCCAGGTGGAGACCCTGAG...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR TCA 90 bp CGGAACACAGCCAACCCGGGCCAAGATGACCGCCCTCCTCGTGAGTCTCCACATCAGCCTGTGGGGAAGTaGAGACGGCAGGTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: RNTANPGQDDRPPRESPHQPVGK*RRQVCW
Trigger: CCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTG...ATGTGGAGACTCACGAGGAGGGCGGTCATCTTGGCCCGGGTTGGCTGTGTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR GCA 90 bp TGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTCAGGGCTGCTGGTGTCTaGTCTCGGCCTGGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: WGSEDGRCAGHSALGWTLRAAGV*SRPGCG
Trigger: CCCACAGCCAGGCCGAGAGCAGACACCAGCAGCCCT...GAGTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR GCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCAACCTCGTAAGTTTATaGAAACTGGACAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLNLVSL*KLDRRE
Trigger: CTCCCTCCTGTCCAGTTTGCATAAACTTACGAGGTT...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTGGACACTCAGCCCTTaGCTGGACACTCGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWWTLSP*LDTRSG
Trigger: GCCTGAGCGAGTGTCCAGCCAAGGGCTGAGTGTCCA...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR CCA 90 bp GGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTGCATGCAACAGGCAAGTaGAGAATCAGAGTGCACCAG +
Preference number: 2 (lower is better)
Translates to: GCGLQGSQRRPRELPTQLHATGK*RIRVHQ
Trigger: CTGGTGCACTCTGATTCTCCACTTGCCTGTTGCATG...CAGCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTATGCGCACGGCGTGGTaGCACATGAAGCGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTMRTAW*HMKRRK
Trigger: CTTCCTACGCTTCATGTGCCACCACGCCGTGCGCAT...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CAA 90 bp CTGAGCAGCTCGACGACGTACACACTCATCAGCCAGTGCAGGAACTaGGCCAGGATCTCCTCACGCAGACGGTGCTCTGCGGCCGGAACA +
Preference number: 2 (lower is better)
Translates to: LSSSTTYTLISQCRN*ARISSRRRCSAAGT
Trigger: TGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCTGATGAGTGTGTACGTCGTCGAGCTGCTCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR TCA 90 bp GTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTGCGGCCGGAACAGGTTTTCGCGTGGGTaGGGTGAGGTGTCACCAACA +
Preference number: 2 (lower is better)
Translates to: VQELGQDLLTQTVLCGRNRFSRG*GEVSPT
Trigger: TGTTGGTGACACCTCACCTCACCCACGCGAAAACCT...GTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR GCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCTCTTGTAGATGTTGGTaGACACCGTCTGGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPSCRCW*TPSGGC
Trigger: ACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR GCA 90 bp ATCGGCCGCAGCCCGTCAGGCTTGGGGATGAAGCGGAGTCTGGACGTCAGCAGGACACTCATCAGCCAGTaGAGGAACTTGGCCAGGATC +
Preference number: 2 (lower is better)
Translates to: IGRSPSGLGMKRSLDVSRTLISQ*RNLARI
Trigger: GATCCTGGCCAAGTTCCTGCACTGGCTGATGAGTGT...CCTGCTGACGTCCAGACTCCGCTTCATCCCCAAGCCTGACGGGCTGCGGCCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp GAACAGTGCCTTCACCCTCGAGGTGAGACGCTCGGCCCTCTTTTCTCTGCGGAACGACTCAGCTGCGTCTaGGCTGTCCTGAGTGACCCC +
Preference number: 2 (lower is better)
Translates to: EQCLHPRGETLGPLFSAERLSCV*AVLSDP
Trigger: GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCG...TTCCGCAGAGAAAAGAGGGCCGAGCGTCTCACCTCGAGGGTGAAGGCACTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CAA 90 bp AGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTaGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGG +
Preference number: 2 (lower is better)
Translates to: SRKTPKSLRRMFLPA*KPRLKVRLALMEVR
Trigger: CCGGACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR CAA 90 bp TTCTGGACCACGGCATACCGACGCACGCAGTACGTGTTCTGGGGTTaGATGATGCTGGCGATGACCTCCGTGAGCCTGTCCTGGGGGATG +
Preference number: 2 (lower is better)
Translates to: FWTTAYRRTQYVFWG*MMLAMTSVSLSWGM
Trigger: CATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGCATCATCAAACCCCAGAACACGTACTGCGTGCGTCGGTATGCCGTGGTCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR GCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTAGGGCTGCTGGTGTCTaGTCTCGGCCTGGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: TMANLGMDYSYVGSGSRARAAGV*SRPGCG
Trigger: CCCACAGCCAGGCCGAGAGCAGACACCAGCAGCCCT...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR GCA 90 bp GGAAGTTCACCACTGTCTTCCGCAAGTTCACCACGCAGCCATACTCAGGGACACAAGGCCTTGCGGACGTaGCCATGGGCGGCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: GSSPLSSASSPRSHTQGHKALRT*PWAAFW
Trigger: CCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTT...GTGTCCCTGAGTATGGCTGCGTGGTGAACTTGCGGAAGACAGTGGTGAACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAGACGGCAGGTGTGCTaGACACTCAGCCCTTGGCTG +
Preference number: 2 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEERRQVC*TLSPWL
Trigger: CAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCT...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR CCA 90 bp TGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAATTCCCAGCTGGTGAGGAAAAGCTaGCCCTGGGGTGGAGCCGAG +
Preference number: 2 (lower is better)
Translates to: CRVLACVQGTPLVTPNSQLVRKS*PWGGAE
Trigger: CTCGGCTCCACCCCAGGGCCAGCTTTTCCTCACCAG...CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR CCA 90 bp CGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCACAGAGACATCCCTGCGTTCTTaGCTTTCAGGATGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: RSTKVRQALWISSRPSTETSLRS*LSGWSS
Trigger: GCTACTCCATCCTGAAAGCCAAGAACGCAGGGATGT...CTCTGTGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp TGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTGCGGCCGGAACAAAACAGCACACAGGCTaGGGGGTGGCCAGAGCTAAA +
Preference number: 2 (lower is better)
Translates to: CRNLARISSRRRCSAAGTKQHTG*GVARAK
Trigger: TTTAGCTCTGGCCACCCCCCAGCCTGTGTGCTGTTT...TGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR TCA 90 bp CGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCACAGAGAAGAGCCTGTTCTTTTaGAACGTGGTCTCCGTGACA +
Preference number: 2 (lower is better)
Translates to: RSTKVRQALWISSRPSTEKSLFF*NVVSVT
Trigger: TGTCACGGAGACCACGTTTCAAAAGAACAGGCTCTT...CTCTGTGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR GCA 90 bp GAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCCTATGGCCTTCAGCCGGACATaGAGGCCTCGGCCAAACACT +
Preference number: 2 (lower is better)
Translates to: EGRARGEQWRIWGWTIPMAFSRT*RPRPNT
Trigger: AGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGC...CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR GCA 90 bp GAGTGGCACGTAGGTGACACGGTGTCGAGTCAGCTTGAGCAGGAATGCTTGGTGGCCTTCAGCCGGACATaGAGGCCTCGGCCAAACACT +
Preference number: 2 (lower is better)
Translates to: EWHVGDTVSSQLEQECLVAFSRT*RPRPNT
Trigger: AGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGC...CACCAAGCATTCCTGCTCAAGCTGACTCGACACCGTGTCACCTACGTGCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR GCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGTGGTGGCACAGCCACTaGACGGCCTCGGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLWWHSH*TASEGR
Trigger: TCTGCCCTCCGAGGCCGTGCAGTGGCTGTGCCACCA...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAGCGAGGGGTGAACAATaGCGAATCTGGGGATGGACT +
Preference number: 2 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPARGEQ*RIWGWT
Trigger: AGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGC...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR CCA 90 bp GACAGCTCCCGCAGCTGCACCCTCTTCAAGTGCTGTCTGATTCCAATGCTTTGCCTCAGGGTCTCCACCTaGATGGTGGGGGTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: DSSRSCTLFKCCLIPMLCLRVST*MVGVEG
Trigger: GCCTTCCACCCCCACCATCCAGGTGGAGACCCTGAG...GCAAAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR TCA 90 bp CATCCCTGCGTTCTTGGCTTTCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGATGCAGCACACATGCGTaGAACCTGTACGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: HPCVLGFQDGVAEGGRVRCSTHA*NLYACS
Trigger: GCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCA...TCTGACACGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGAACGCAGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR GCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAACACGCAGCACGAAGGTaGGCCAGGCCCTGTGGATAT +
Preference number: 2 (lower is better)
Translates to: LQPQDPKEFATHVPPSLEHAARR*ARPCGY
Trigger: ATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTG...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAAGCAGGAATGCTTGGTaGCACAGCCACTGCACGGCC +
Preference number: 2 (lower is better)
Translates to: LQPQDPKEFATHVPPSLESRNAW*HSHCTA
Trigger: GGCCGTGCAGTGGCTGTGCCACCAAGCATTCCTGCT...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCATGGCGAATCTGGGGATaGACTATTCCTATGTGGGGA +
Preference number: 2 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPWRIWG*TIPMWG
Trigger: TCCCCACATAGGAATAGTCCATCCCCAGATTCGCCA...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR CCA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAGGATCTTGTAGATGTTaGTGCACACCGTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEEGSCRC*CTPSGG
Trigger: GCCTCCAGACGGTGTGCACCAACATCTACAAGATCC...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR TCA 90 bp ACGTCGCTAGATGCCATGGAGGCCAGCACAGGTAAAGCTGGGGTTTACCAGCAAAAAGCAAATGCCCAGTaGCCAGGAGGCAACGAGAGG +
Preference number: 2 (lower is better)
Translates to: TSLDAMEASTGKAGVYQQKANAQ*PGGNER
Trigger: CCTCTCGTTGCCTCCTGGTCACTGGGCATTTGCTTT...TTGCTGGTAAACCCCAGCTTTACCTGTGCTGGCCTCCATGGCATCTAGCGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR GCA 90 bp CATCCCTGCGTTCTTGGCTTTCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGAAGACCCCAAAGAGTTTaGGACGCATGTTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: HPCVLGFQDGVAEGGRVRRPQRV*DACSSQ
Trigger: CTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCT...TCTGACACGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGAACGCAGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CCA 90 bp TGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTGCGGCCGGAACAGAACAATGGCGAATCTaGGGATGGACTATTCCTATG +
Preference number: 2 (lower is better)
Translates to: CRNLARISSRRRCSAAGTEQWRI*GWTIPM
Trigger: CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTC...TGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp GAGTGGCACGTAGGTGACACGGTGTCGAGTCAGCTTGAGCAGGAATGCTTGGTGTTGGTGCACACCGTCTaGAGGCTGTTCACCTGCAAA +
Preference number: 2 (lower is better)
Translates to: EWHVGDTVSSQLEQECLVLVHTV*RLFTCK
Trigger: TTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAA...CACCAAGCATTCCTGCTCAAGCTGACTCGACACCGTGTCACCTACGTGCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR TCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGGAATGAGAACTGCTTaGACCGAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LQPQDPKEFATHVPPSLEGMRTA*TEEAEV
Trigger: AACCTCTGCCTCCTCGGTTCAAGCAGTTCTCATTCC...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR TCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGCCGTCACATCCACCTTaGCAAAGTACAGCTCAGGCG +
Preference number: 2 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLPSHPP*QSTAQA
Trigger: CGCCTGAGCTGTACTTTGTCAAGGTGGATGTGACGG...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAATTGGTGCACACCGTCTaGAGGCTGTTCACCTGCAAA +
Preference number: 2 (lower is better)
Translates to: LQPQDPKEFATHVPPSLELVHTV*RLFTCK
Trigger: TTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAA...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR TCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGTTCGCGTGGGTGAGGTaGGGTGTCACCAACAAGAAA +
Preference number: 2 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLFAWVR*GVTNKK
Trigger: TTTCTTGTTGGTGACACCTCACCTCACCCACGCGAA...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR GCA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTAAGGGAACGAGGACATaGAACAGGCAAGTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTKGTRT*NRQVEN
Trigger: ATTCTCCACTTGCCTGTTGCATGTCCTCGTTCCCTT...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CAA 90 bp CGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTaGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTA +
Preference number: 2 (lower is better)
Translates to: RVRDDAQEKCGVLPN*LMKWELQHTCVKPV
Trigger: TACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR CAA 90 bp CAACTTGCTCCAGACACTCTTCCGGTAGAAAAAGAGCCTGTTCTTTaGAAACGTGGTCTCCGTGACATAAAAGAAAGACCTGAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: QLAPDTLPVEKEPVL*KRGLRDIKERPEQL
Trigger: GAGCTGCTCAGGTCTTTCTTTTATGTCACGGAGACCACGTTTCAAAAGAACAGGCTCTTTTTCTACCGGAAGAGTGTCTGGAGCAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp CGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCCCTaGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: RCGPGCGPPLPP*DVEPGVTGLLV
Trigger: CACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGGCGGCCCACACCCAGGCCCGCACCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR GCA 72 bp GCGGCGGGTCCTGGGCCCGCACACGCAGCACGAAGGTaGGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: AAGPGPAHAARR*ARPCGYRPGPA
Trigger: TGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCGGGCCCAGGACCCGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp GCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTaGCCCCCAGCGACATCCCTGCGTTCTTGGCTTTCA +
Preference number: 3 (lower is better)
Translates to: ARPRRAEGRRRP*PPATSLRSWLS
Trigger: TGAAAGCCAAGAACGCAGGGATGTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CAA 90 bp CACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGCGACATGTTCCTCCCAGCCTaGAAGCCGCGGTTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: HCTASEGRGPAAPLAPSDMFLPA*KPRLKV
Trigger: CACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACAT...GTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CAA 90 bp ACCTCCAGGGTCCGGGTATCCAGCAGCAGGCCGCACCAGGGGAATAGGCCGTGGGAGGGCAGTGCCGGGTaGGCTGCGGCCTCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: TSRVRVSSSRPHQGNRPWEGSAG*AAASRA
Trigger: TGCCCTGGAGGCCGCAGCCAACCCGGCACTGCCCTC...CCACGGCCTATTCCCCTGGTGCGGCCTGCTGCTGGATACCCGGACCCTGGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp CCGGCTCCACTGCCGCGCCCAGCCTCCTCTGTTCACTaGTCTGGCCTCGGCGCCTGGAAACCGCGTGTCCAT +
Preference number: 3 (lower is better)
Translates to: PAPLPRPASSVH*SGLGAWKPRVH
Trigger: ATGGACACGCGGTTTCCAGGCGCCGAGGCCAGAGCAGTGAACAGAGGAGGCTGGGCGCGGCAGTGGAGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 72 bp GGCGGGTGGCCATCAGTCCAGGATGGTCTTGAAGTCTaGGGGCAGTGCCGGGTTGGCTGCGGCCTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: GGWPSVQDGLEV*GQCRVGCGLQG
Trigger: GCCCTGGAGGCCGCAGCCAACCCGGCACTGCCCTCAGACTTCAAGACCATCCTGGACTGATGGCCACCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp GCCAGAGCGTCTGTGCTTCCAGACACTTCTCCCCATTaGCGGCAACCCGGCTCCACTGCCGCGCCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: ARASVLPDTSPH*RQPGSTAAPSL
Trigger: GAGGCTGGGCGCGGCAGTGGAGCCGGGTTGCCGGCAATGGGGAGAAGTGTCTGGAAGCACAGACGCTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp AGTCTGGACGTCAGCAGGGCGGGCCTGGCTTCCCGATaGTGCCTGACCTCTGCTTCCGACAGCTCCCGCAGC +
Preference number: 3 (lower is better)
Translates to: SLDVSRAGLASR*CLTSASDSSRS
Trigger: GCTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGCCAGGCCCGCCCTGCTGACGTCCAGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp TCCACCTTGACAAAGTACAGCTCAGGCGGCGGGTCCTaGGCCCGCACACGCAGCACGAAGGTGCGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: STLTKYSSGGGS*ARTRSTKVRQA
Trigger: GGCCTGGCGCACCTTCGTGCTGCGTGTGCGGGCCCAGGACCCGCCGCCTGAGCTGTACTTTGTCAAGGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp CGCCGTAGCACAGGCTGCAGAGCAGCGTGGAGAGGATaGAGCCCTGCGGGATCCCCTGGCACTGGACGTAGG +
Preference number: 3 (lower is better)
Translates to: RRSTGCRAAWRG*SPAGSPGTGRR
Trigger: CCTACGTCCAGTGCCAGGGGATCCCGCAGGGCTCCATCCTCTCCACGCTGCTCTGCAGCCTGTGCTACGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CAA 90 bp GCTGGCGATGACCTCCGTGAGCCTGTCCTGGGGGATGGTGTCGTACGCGCCCGTAGACACTTCTCCCCATaGCCGGCAACCCGGCTCCAC +
Preference number: 3 (lower is better)
Translates to: AGDDLREPVLGDGVVRARRHFSP*PATRLH
Trigger: GTGGAGCCGGGTTGCCGGCAATGGGGAGAAGTGTCT...ACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 72 bp GGCTGTGGGCGGGTGGCCATCAGTCCAGGATGGTCTTaGAGTCTGAGGGCAGTGCCGGGTTGGCTGCGGCCT +
Preference number: 3 (lower is better)
Translates to: GCGRVAISPGWS*SLRAVPGWLRP
Trigger: AGGCCGCAGCCAACCCGGCACTGCCCTCAGACTTCAAGACCATCCTGGACTGATGGCCACCCGCCCACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp GGCGGGTCTCTGCAGGCACCCTCGCCAGAGCGTCTGTaGTTCCAGACACTTCTCCCCATTGCCGGCAACCCG +
Preference number: 3 (lower is better)
Translates to: GGSLQAPSPERL*FQTLLPIAGNP
Trigger: CGGGTTGCCGGCAATGGGGAGAAGTGTCTGGAAGCACAGACGCTCTGGCGAGGGTGCCTGCAGAGACCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp CAGGGCGGGCCTGGCTTCCCGATGCTGCCTGACCTCTaGTTCCGACAGCTCCCGCAGCTGCACCCTCTTCAA +
Preference number: 3 (lower is better)
Translates to: QGGPGFPMLPDL*FRQLPQLHPLQ
Trigger: TTGAAGAGGGTGCAGCTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGCCAGGCCCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp GCGCCGCGCCCGCTCGTAGTTGAGCACGCTGAACAGTaGCTTCACCCTCGAGGTGAGACGCTCGGCCCTCTT +
Preference number: 3 (lower is better)
Translates to: APRPLVVEHAEQ*LHPRGETLGPL
Trigger: AAGAGGGCCGAGCGTCTCACCTCGAGGGTGAAGGCACTGTTCAGCGTGCTCAACTACGAGCGGGCGCGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp GAGACGTGGCTCTTGAAGGCCTTGCGGACGTGCCCATaGGCGGCCTTCTGGACCACGGCATACCGACGCACG +
Preference number: 3 (lower is better)
Translates to: ETWLLKALRTCP*AAFWTTAYRRT
Trigger: CGTGCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CAA 90 bp GGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCACTTGAGCAGGAATGCTaGGTGGCACAGCCACTGCAC +
Preference number: 3 (lower is better)
Translates to: GWLRPPGQSASSPGASDSLEQEC*VAQPLH
Trigger: GTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAAG...TGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CAA 90 bp CCCACAGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCAGCCAGTGCAGGAACTaGGCCAGGATCTCCTCACGC +
Preference number: 3 (lower is better)
Translates to: PTGTPIQVQGPRLCTGHTSQCRN*ARISSR
Trigger: GCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCT...GGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 72 bp AGGCCGCACCAGGGGAATAGGCCGTGGGCCGGCATCTaGACAAAAGCCGTGCCACCCAGGGCCTCGTCTTCT +
Preference number: 3 (lower is better)
Translates to: RPHQGNRPWAGI*TKAVPPRASSS
Trigger: AGAAGACGAGGCCCTGGGTGGCACGGCTTTTGTTCAGATGCCGGCCCACGGCCTATTCCCCTGGTGCGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp TGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTaGTCTGCGGCCGGAACACAGCCAACCCGGGCCAAG +
Preference number: 3 (lower is better)
Translates to: CRNLARISSRRR*SAAGTQPTRAK
Trigger: CTTGGCCCGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp TCTCCATGTCGCCGTAGCACAGGCTGCAGAGCAGCGTaGAGAGGATGGAGCCCTGCGGGATCCCCTGGCACT +
Preference number: 3 (lower is better)
Translates to: SPCRRSTGCRAA*RGWSPAGSPGT
Trigger: AGTGCCAGGGGATCCCGCAGGGCTCCATCCTCTCCACGCTGCTCTGCAGCCTGTGCTACGGCGACATGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CAA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCCAGTCCAGGATGGTCTaGAAGTCTGAGGGCAGTGCC +
Preference number: 3 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPQSRMV*KSEGSA
Trigger: GGCACTGCCCTCAGACTTCAAGACCATCCTGGACTG...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR TCA 72 bp ACGACGGCATCCCTCAGCGGGCTGGTCTCCTGCAGGTaGGCCACGAACTGTCGCATGTACGGCTGGAGGTCT +
Preference number: 3 (lower is better)
Translates to: TTASLSGLVSCR*ATNCRMYGWRS
Trigger: AGACCTCCAGCCGTACATGCGACAGTTCGTGGCTCACCTGCAGGAGACCAGCCCGCTGAGGGATGCCGTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATaGAGGCCTCGGCCAAACACTCACTCAGGCCTCAGA +
Preference number: 3 (lower is better)
Translates to: QASAGHSAFSRT*RPRPNTHSGLR
Trigger: TCTGAGGCCTGAGTGAGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR GCA 72 bp GAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTaGGGCCGGAACACAGCCAACCCGGGCCAAGATGAC +
Preference number: 3 (lower is better)
Translates to: ELGQDLLTQTVL*GRNTANPGQDD
Trigger: GTCATCTTGGCCCGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp TTGAAGGCCTTGCGGACGTGCCCATGGGCGGCCTTCTaGACCACGGCATACCGACGCACGCAGTACGTGTTC +
Preference number: 3 (lower is better)
Translates to: LKALRTCPWAAF*TTAYRRTQYVF
Trigger: GAACACGTACTGCGTGCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CAA 90 bp ACCTCCAGGGTCCGGGTATCCAGCAGCAGGCCGCACCAGGGGAATAGGCCGTGGTACGTGTTCTGGGGTTaGATGATGCTGGCGATGACC +
Preference number: 3 (lower is better)
Translates to: TSRVRVSSSRPHQGNRPWYVFWG*MMLAMT
Trigger: GGTCATCGCCAGCATCATCAAACCCCAGAACACGTA...CCACGGCCTATTCCCCTGGTGCGGCCTGCTGCTGGATACCCGGACCCTGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp GTAGGTGACACGGTGTCGAGTCAGCTTGAGCAGGAATaGTTGGTGGCACAGCCACTGCACGGCCTCGGAGGG +
Preference number: 3 (lower is better)
Translates to: VGDTVSSQLEQE*LVAQPLHGLGG
Trigger: CCCTCCGAGGCCGTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAAGCTGACTCGACACCGTGTCACCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR GCA 72 bp GGCAAGTGGAGAATCAGAGTGCACCAGGCGGGTCTCTaGAGGCACCCTCGCCAGAGCGTCTGTGCTTCCAGA +
Preference number: 3 (lower is better)
Translates to: GKWRIRVHQAGL*RHPRQSVCASR
Trigger: TCTGGAAGCACAGACGCTCTGGCGAGGGTGCCTGCAGAGACCCGCCTGGTGCACTCTGATTCTCCACTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp AAGGTAGAGACGTGGCTCTTGAAGGCCTTGCGGACGTaGCCATGGGCGGCCTTCTGGACCACGGCATACCGA +
Preference number: 3 (lower is better)
Translates to: KVETWLLKALRT*PWAAFWTTAYR
Trigger: TCGGTATGCCGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGTCTCTACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp TTGATGATGCTGGCGATGACCTCCGTGAGCCTGTCCTaGGGGATGGTGTCGTACGCGCCCGTCACATCCACC +
Preference number: 3 (lower is better)
Translates to: LMMLAMTSVSLS*GMVSYAPVTST
Trigger: GGTGGATGTGACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGCATCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp CGACGACGTACACACTCATCAGCCAGTGCAGGAACTTaGCCAGGATCTCCTCACGCAGACGGTGCTCTGCGG +
Preference number: 3 (lower is better)
Translates to: RRRTHSSASAGT*PGSPHADGALR
Trigger: CCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCTGATGAGTGTGTACGTCGTCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp AACGAGGACATGCAACAGGCAAGTGGAGAATCAGAGTaGACCAGGCGGGTCTCTGCAGGCACCCTCGCCAGA +
Preference number: 3 (lower is better)
Translates to: NEDMQQASGESE*TRRVSAGTLAR
Trigger: TCTGGCGAGGGTGCCTGCAGAGACCCGCCTGGTGCACTCTGATTCTCCACTTGCCTGTTGCATGTCCTCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp CTGAGCAGCTCGACGACGTACACACTCATCAGCCAGTaGAGGAACTTGGCCAGGATCTCCTCACGCAGACGG +
Preference number: 3 (lower is better)
Translates to: LSSSTTYTLISQ*RNLARISSRRR
Trigger: CCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCTGATGAGTGTGTACGTCGTCGAGCTGCTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp GGAATAGGCCGTGGGCCGGCATCTGAACAAAAGCCGTaGCACCCAGGGCCTCGTCTTCTACAGGGAAGTTCA +
Preference number: 3 (lower is better)
Translates to: GIGRGPASEQKP*HPGPRLLQGSS
Trigger: TGAACTTCCCTGTAGAAGACGAGGCCCTGGGTGGCACGGCTTTTGTTCAGATGCCGGCCCACGGCCTATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp CCAGCCTCCTCTGTTCACTGCTCTGGCCTCGGCGCCTaGAAACCGCGTGTCCATCAAAACGTGAAGGTGAAC +
Preference number: 3 (lower is better)
Translates to: PASSVHCSGLGA*KPRVHQNVKVN
Trigger: GTTCACCTTCACGTTTTGATGGACACGCGGTTTCCAGGCGCCGAGGCCAGAGCAGTGAACAGAGGAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp TGGACCACGGCATACCGACGCACGCAGTACGTGTTCTaGGGTTTGATGATGCTGGCGATGACCTCCGTGAGC +
Preference number: 3 (lower is better)
Translates to: WTTAYRRTQYVF*GLMMLAMTSVS
Trigger: GCTCACGGAGGTCATCGCCAGCATCATCAAACCCCAGAACACGTACTGCGTGCGTCGGTATGCCGTGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR-3UTR CAA 90 bp CATCCCTGCGTTCTTGGCTTTCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGAGCCTTGAAGCCGCGGTaGAAGGTGAGACTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: HPCVLGFQDGVAEGGRVRALKPR*KVRLAL
Trigger: CAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGC...TCTGACACGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGAACGCAGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CAA 90 bp CAGGCTGTGACACTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTGCCTTGAAGCCGCGGTaGAAGGTGAGACTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: QAVTLQPQDPKEFATHVPALKPR*KVRLAL
Trigger: CAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGC...AGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CAA 90 bp GAGTGGCACGTAGGTGACACGGTGTCGAGTCAGCTTGAGCAGGAATGCTTGGTGATGTTCCTCCCAGCCTaGAAGCCGCGGTTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: EWHVGDTVSSQLEQECLVMFLPA*KPRLKV
Trigger: CACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACAT...CACCAAGCATTCCTGCTCAAGCTGACTCGACACCGTGTCACCTACGTGCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR CCA 72 bp AAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTaGGGATGGACTATTCCTATGTGGGGAGTGGAAGCC +
Preference number: 3 (lower is better)
Translates to: KEGRARGEQWRI*GWTIPMWGVEA
Trigger: GGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR GCA 72 bp GACCGCCCTCCTCGTGAGTCTCCACATCTTCATCTGTaGATCATAAGCAGAGGTCCCCGGACGTCGCTAGAT +
Preference number: 3 (lower is better)
Translates to: DRPPRESPHLHL*IISRGPRTSLD
Trigger: ATCTAGCGACGTCCGGGGACCTCTGCTTATGATGCACAGATGAAGATGTGGAGACTCACGAGGAGGGCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp TGCTGCCTGACCTCTGCTTCCGACAGCTCCCGCAGCTaGACCCTCTTCAAGTGCTGTCTGATTCCAATGCTT +
Preference number: 3 (lower is better)
Translates to: CCLTSASDSSRS*TLFKCCLIPML
Trigger: AAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp GAACAATGGCGAATCTGGGGATGGACTATTCCTATGTaGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAAGC +
Preference number: 3 (lower is better)
Translates to: EQWRIWGWTIPM*GVEAGLLVRKS
Trigger: GCTTTTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR-3UTR CAA 90 bp ATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGCCTGCAGCAGGAGCCAATGCTTTGCAACTaGCTCCAGACACTCTTCCGG +
Preference number: 3 (lower is better)
Translates to: MKWELQHTCVKPVRLQQEPMLCN*LQTLFR
Trigger: CCGGAAGAGTGTCTGGAGCAAGTTGCAAAGCATTGG...CTCCTGCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR GCA 72 bp TGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTaGACACCGTCTGGAGGCTGTTCACCTGCAAATCCA +
Preference number: 3 (lower is better)
Translates to: CTPAAGGSCRCW*TPSGGCSPANP
Trigger: TGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CAA 90 bp CGTGACATAAAAGAAAGACCTGAGCAGCTCGACGACGTACACACTCATCAGCCACGGTGTCGAGTCAGCTaGAGCAGGAATGCTTGGTGG +
Preference number: 3 (lower is better)
Translates to: RDIKERPEQLDDVHTHQPRCRVS*SRNAWW
Trigger: CCACCAAGCATTCCTGCTCAAGCTGACTCGACACCG...TGGCTGATGAGTGTGTACGTCGTCGAGCTGCTCAGGTCTTTCTTTTATGTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR TCA 72 bp TGGAGGCTGTTCACCTGCAAATCCAGAAACAGGCTGTaGCACTTCAGCCGCAAGACCCCAAAGAGTTTGCGA +
Preference number: 3 (lower is better)
Translates to: WRLFTCKSRNRL*HFSRKTPKSLR
Trigger: TCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTGTTTCTGGATTTGCAGGTGAACAGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR TCA 72 bp TCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGAGATaGCGCGCAGGAAAAATGTGGGGTTCTTCCAAACTT +
Preference number: 3 (lower is better)
Translates to: SGWSSRGRPCQR*RAGKMWGSSKL
Trigger: AAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCTCTGCTACTCCATCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CAA 90 bp GAGGATCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCAAGACCCCAAAGAGTTaGCGACGCATGTTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: EDLVDVGAHRLEAVHLQIKTPKS*RRMFLP
Trigger: TGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTT...GATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
3UTR-3UTR CAA 90 bp GACAGCTCCCGCAGCTGCACCCTCTTCAAGTGCTGTCTGATTCCAATGCTTTGCCAGCTACTCATGAGGTaGAGGAATGAGAACTGCTTG +
Preference number: 3 (lower is better)
Translates to: DSSRSCTLFKCCLIPMLCQLLMR*RNENCL
Trigger: CAAGCAGTTCTCATTCCTCAACCTCATGAGTAGCTG...GCAAAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CCA 72 bp GAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATaGGAGCTGCAGCACACATGCGTGAAACCTGTACGC +
Preference number: 3 (lower is better)
Translates to: EKCGVLPNLLMK*ELQHTCVKPVR
Trigger: GCGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCCACCGGCTGCTGGGGTaGCCGCAGCTCGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPHRLLG*PQLAAG
Trigger: GCCCGCTGCGAGCTGCGGTCACCCCAGCAGCCGGTG...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
79% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCCTGGCGGCCCACGGATaGGTGGGAGTGGCGCGTGCC +
Preference number: 4 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPLAAHG*VGVARA
Trigger: GGCACGCGCCACTCCCACCCATCCGTGGGCCGCCAG...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
78% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp CACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGCGACGCGGGCAGTGCGTCTTaGGGAGCACCCCGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: HCTASEGRGPAAPLAPSDAGSAS*GAPRRG
Trigger: GCCCCTACGGGGTGCTCCTCAAGACGCACTGCCCGC...GTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCCCCGCTCCCCCGCAGTaGGTCGGTCACCGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPPAPPQ*VGHRVG
Trigger: CCCAACACGGTGACCGACGCACTGCGGGGGAGCGGG...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
77% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGCGACGACTTCGGCTGGCACTaGCCCCGCGCCTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: HCTASEGRGPAAPLAPSDDFGWH*PRASSH
Trigger: GTGCGAGGAGGCGCGGGGGCAGTGCCAGCCGAAGTC...GTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGCGACGCAGGCGGGGCAACCTaGGGGGAGTCCCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: HCTASEGRGPAAPLAPSDAGGAT*GESLAS
Trigger: GGATGCCAGGGACTCCCCGCAGGTTGCCCCGCCTGC...GTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCCTCTCGGCCTGGCTGTaGGCGGGTGGCCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPLSAWL*AGGHQS
Trigger: GGACTGATGGCCACCCGCCCACAGCCAGGCCGAGAG...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
76% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCTCAGACTCCCAGCGGTaGGGGCCTGGGTGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLSDSQR*GPGCGP
Trigger: CGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGA...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCGCCGCCACAGAGCCCTaGGGCTTCTCCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLAATEP*GFSRAQ
Trigger: CTGTGCCCGGGAGAAGCCCCAGGGCTCTGTGGCGGC...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCACCGGCTGCTGGGGTaGCCGCAGCTCGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSAHRLLG*PQLAAG
Trigger: GCCCGCTGCGAGCTGCGGTCACCCCAGCAGCCGGTG...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGCGACAAGCGGCGTTCGTTGTaGCTGGAGCCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HCTASEGRGPAAPLAPSDKRRSL*LEPQRP
Trigger: AGGCCTCTGGGGCTCCAGGCACAACGAACGCCGCTT...GTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTGGCGCCGCACGAACGTaGCCAGCGGCAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELGAART*PAAAPR
Trigger: GCGAGGTGCTGCCGCTGGCCACGTTCGTGCGGCGCC...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCACGCACACCAGGCACTaGGCCACCAGCGCGCGGAAA +
Preference number: 4 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLTHTRH*ATSARK
Trigger: TTTCCGCGCGCTGGTGGCCCAGTGCCTGGTGTGCGT...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTGGCCGCCACAGAGCCCTaGGGCTTCTCCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GCGLQGSQRRPRELPTQLAATEP*GFSRAQ
Trigger: CTGTGCCCGGGAGAAGCCCCAGGGCTCTGTGGCGGC...CAGCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCTCAGGCGGCGGGTCCTaGGCCCGCACACGCAGCACG +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGSGGGS*ARTRST
Trigger: CGTGCTGCGTGTGCGGGCCCAGGACCCGCCGCCTGA...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCGGCTGCAGAGCAGCGTaGAGAGGATGGAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLGCRAA*RGWSPA
Trigger: CGCAGGGCTCCATCCTCTCCACGCTGCTCTGCAGCC...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR CAA 72 bp TGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTaGGCCCCCAGCGACATCCCTGCGTTCTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: CTASEGRGPAAP*APSDIPAFLAF
Trigger: GAAAGCCAAGAACGCAGGGATGTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCCCCGCTCCCCCGCAGTaGGTCGGTCACCGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGPAPPQ*VGHRVG
Trigger: CCCAACACGGTGACCGACGCACTGCGGGGGAGCGGG...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCTCGGTCCACGCGTCCTaGCCGGGTGGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRSVHAS*PGGPRT
Trigger: GGTCCTGGGCCCACCCGGGCAGGACGCGTGGACCGA...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCACAGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCGGCGCCGCACGAACGTaGCCAGCGGCAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: PTGTPIQVQGPRLCTGHTGAART*PAAAPR
Trigger: GCGAGGTGCTGCCGCTGGCCACGTTCGTGCGGCGCC...GGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCTGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCGGCGCCGCACGAACGTaGCCAGCGGCAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPGAART*PAAAPR
Trigger: GCGAGGTGCTGCCGCTGGCCACGTTCGTGCGGCGCC...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCGTGGCAGCGCCGAGCTaGTACAGCGGCGGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRVAAPS*YSGGPH
Trigger: GTGCGGGCCGCCGCTGTACCAGCTCGGCGCTGCCAC...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTGGGTCCACTAGCGTGTaGCGGGGGCCGGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSAGSTSV*RGPGLS
Trigger: ACTCAGGCCCGGCCCCCGCCACACGCTAGTGGACCC...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCTGCGGGGAGTCCCTaGCATCCAGGGCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELPAGSP*HPGPGT
Trigger: GGTTCCAGGCCCTGGATGCCAGGGACTCCCCGCAGG...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCCTCTGCGGAACGTTCTaGCTCCCACGACGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPLCGTF*LPRRSP
Trigger: TGGACTACGTCGTGGGAGCCAGAACGTTCCGCAGAG...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCACACGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCTCAGGCGGCGGGTCCTaGGCCCGCACACGCAGCACG +
Preference number: 4 (lower is better)
Translates to: RTRSTKVRQALWISSRPSSGGGS*ARTRST
Trigger: CGTGCTGCGTGTGCGGGCCCAGGACCCGCCGCCTGA...GCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCCGACTCAGCTGCGTCTaGGCTGTCCTGAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLRLSCV*AVLSDP
Trigger: GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCG...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTGTTCAGCTCTGGGGCCTaGGCCCTCGACGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: GCGLQGSQRRPRELPTQLFSSGA*ALDGHH
Trigger: GTGGTGGCCGTCGAGGGCCCAGGCCCCAGAGCTGAA...CAGCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCCTTCCCGATGCTGCCTaGCCTCTGCTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLLPDAA*PLLPTA
Trigger: AGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAG...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCCGTAGGACTTGCCCCTaGTGCGCACGGCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSGLSRTLSLQPDMQASARRTCP*CARRGG
Trigger: GCCACCACGCCGTGCGCATCAGGGGCAAGTCCTACG...GGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTGCGTCTGGGCTGTCCTaGGTGACCCCAGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELASGLS*VTPGVA
Trigger: TGCCACTCCTGGGGTCACTCAGGACAGCCCAGACGC...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CGCACACGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCCCCGCTCCCCCGCAGTaGGTCGGTCACCGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RTRSTKVRQALWISSRPSPAPPQ*VGHRVG
Trigger: CCCAACACGGTGACCGACGCACTGCGGGGGAGCGGG...GCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp AGTGCACCAGGCGGGTCTCTGCAGGCACCCTCGCCAGAGCGTCTGTGCTTCCAGTCGGTCCACGCGTCCTaGCCGGGTGGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: SAPGGSLQAPSPERLCFQSVHAS*PGGPRT
Trigger: GGTCCTGGGCCCACCCGGGCAGGACGCGTGGACCGA...CTGGAAGCACAGACGCTCTGGCGAGGGTGCCTGCAGAGACCCGCCTGGTGCACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp AGGCCTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGCAGGCGGGGCAACCTaGGGGGAGTCCCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: RPRPNTHSGLRLPAVRAWAGGAT*GESLAS
Trigger: GGATGCCAGGGACTCCCCGCAGGTTGCCCCGCCTGC...CCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTGGCACAGACACCGGCTaGTGGGGTGACCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSAGTDTG*WGDRSS
Trigger: CGAGCTGCGGTCACCCCAGCAGCCGGTGTCTGTGCC...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCCAACCCCTGGGCTCCTaGGCAGCCAAGCGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGQPLGS*AAKRSP
Trigger: GGGACTGCGCTTGGCTGCGCAGGAGCCCAGGGGTTG...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310581.10
CDS-3UTR GCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCCGTCGAAGAGGCCACTaGTGGCCTCATTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLRRRGH*WPHSGR
Trigger: CCTCCCTGAATGAGGCCAGCAGTGGCCTCTTCGACG...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCTTCAGGCAGGACACCTaGCGGAAGGAGGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGFRQDT*RKEGAA
Trigger: CGCCGCCCCCTCCTTCCGCCAGGTGTCCTGCCTGAA...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCACAGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCGGGGCCGGGCCTGAGTaGCAGCGCCGAGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: PTGTPIQVQGPRLCTGHTGAGPE*QRRAGT
Trigger: TGTACCAGCTCGGCGCTGCCACTCAGGCCCGGCCCC...GGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCTGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTGTCCCAGGGACGTaGTGGCCGCGATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GCGLQGSQRRPRELPTQLRVPGT*WPRCGW
Trigger: CCATCCACATCGCGGCCACCACGTCCCTGGGACACG...CAGCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCCTGATGCGCACGGCGTaGTGGCACATGAAGCGTAGG +
Preference number: 4 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLLMRTA*WHMKRR
Trigger: CCTACGCTTCATGTGCCACCACGCCGTGCGCATCAG...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTGGGCTGCAGAGCAGCGTaGAGAGGATGGAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GCGLQGSQRRPRELPTQLGCRAA*RGWSPA
Trigger: CGCAGGGCTCCATCCTCTCCACGCTGCTCTGCAGCC...CAGCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCCTCTCGGCCTGGCTGTaGGCGGGTGGCCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGLSAWL*AGGHQS
Trigger: GGACTGATGGCCACCCGCCCACAGCCAGGCCGAGAG...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACCCGCCCCTCCCTCCCTaGGACGTAGAGCCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNPPLPP*DVEPGV
Trigger: CACGCCGGGCTCTACGTCCCAGGGAGGGAGGGGCGG...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGCGACAAACAGCACACAGGCTaGGGGGTGGCCAGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: HCTASEGRGPAAPLAPSDKQHTG*GVARAK
Trigger: TTTAGCTCTGGCCACCCCCCAGCCTGTGTGCTGTTT...GTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTGGCGGGTCTGGCAGGTaGCACCACACAGAAACCACG +
Preference number: 4 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELGGSGR*HHTETT
Trigger: CGTGGTTTCTGTGTGGTGTCACCTGCCAGACCCGCC...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACGCGGGCAGTGCGTCTTaGGGAGCACCCCGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNAGSAS*GAPRRG
Trigger: GCCCCTACGGGGTGCTCCTCAAGACGCACTGCCCGC...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCGCGTCTGGGCTGTCCTaGGTGACCCCAGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGASGLS*VTPGVA
Trigger: TGCCACTCCTGGGGTCACTCAGGACAGCCCAGACGC...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCGGGCAGGGCGAGGGGTaGACAATGGCGAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSGLSRTLSLQPDMQASAGQGEG*TMANLG
Trigger: CCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCC...GGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCGGTGGGAGTGGCGCGTaGCAGAGAGCGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRGGSGA*QRAHPP
Trigger: TGGAGGGTGCGCTCTCTGGCACGCGCCACTCCCACC...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GCTGGCGATGACCTCCGTGAGCCTGTCCTGGGGGATGGTGTCGTACGCGCCCGTGGTGGGAGTGGCGCGTaGCAGAGAGCGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGDDLREPVLGDGVVRARGGSGA*QRAHPP
Trigger: TGGAGGGTGCGCTCTCTGGCACGCGCCACTCCCACC...ACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCGGCACAGACACCGGCTaGTGGGGTGACCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRGTDTG*WGDRSS
Trigger: CGAGCTGCGGTCACCCCAGCAGCCGGTGTCTGTGCC...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GCTGGCGATGACCTCCGTGAGCCTGTCCTGGGGGATGGTGTCGTACGCGCCCGTCAGTGCCGGGTTGGCTaGGGCCTCCAGGGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: AGDDLREPVLGDGVVRARQCRVG*GLQGSQ
Trigger: CTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG...ACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTGGACCCCCATCCAGGTaGAGGGTCCTCGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELGPPSR*RVLACV
Trigger: TACACAGGCGAGGACCCTGCACCTGGATGGGGGTCC...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCCGTCGGTCACCGTGTTaGGCAGGTAGCTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: RSGLSRTLSLQPDMQASARRSPC*AGSCAR
Trigger: GCGTGCGCAGCTACCTGCCCAACACGGTGACCGACG...GGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCACGTCGGTCACCGTGTTaGGCAGGTAGCTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: GWLRPPGQSASSPGASDSRRSPC*AGSCAR
Trigger: GCGTGCGCAGCTACCTGCCCAACACGGTGACCGACG...TGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACGGCAGACTTCGGCTaGCACTGCCCCCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNTADFG*HCPRAS
Trigger: GGAGGCGCGGGGGCAGTGCCAGCCGAAGTCTGCCGT...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CACTCGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGGCAGCGCCACGCCTaGGCCTCTTGGGCAACGGCA +
Preference number: 4 (lower is better)
Translates to: HSLRPQPDTQPSAGHAGLGQRHA*ASWATA
Trigger: TGCCGTTGCCCAAGAGGCCCAGGCGTGGCGCTGCCC...GAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCGAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCACGGATGGGTGGGAGTaGCGCGTGCCAGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: RSGLSRTLSLQPDMQASATDGWE*RVPESA
Trigger: TGCGCTCTCTGGCACGCGCCACTCCCACCCATCCGT...GGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTCGGCCCACGGATGGGTaGGAGTGGCGCGTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCRPTDG*EWRVPE
Trigger: CTCTGGCACGCGCCACTCCCACCCATCCGTGGGCCG...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCACTGGCGGCCCACGGATaGGTGGGAGTGGCGCGTGCC +
Preference number: 4 (lower is better)
Translates to: EPSASLWGSEDGRCAGHSLAAHG*VGVARA
Trigger: GGCACGCGCCACTCCCACCCATCCGTGGGCCGCCAG...TGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCCGTGTCCCAGGGACGTaGTGGCCGCGATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: RSGLSRTLSLQPDMQASARVPGT*WPRCGW
Trigger: CCATCCACATCGCGGCCACCACGTCCCTGGGACACG...GGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCACAGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCCCTGCGGGGAGTCCCTaGCATCCAGGGCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: PTGTPIQVQGPRLCTGHTPAGSP*HPGPGT
Trigger: GGTTCCAGGCCCTGGATGCCAGGGACTCCCCGCAGG...GGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCGCCTGTCCTGGGGGATaGTGTCGTACGCGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: RSGLSRTLSLQPDMQASAACPGG*CRTRPS
Trigger: TGACGGGCGCGTACGACACCATCCCCCAGGACAGGC...GGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCACGCAGTACGTGTTCTaGGGTTTGATGATGCTGGCG +
Preference number: 4 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPTQYVF*GLMMLA
Trigger: CGCCAGCATCATCAAACCCCAGAACACGTACTGCGT...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCCCATGGGCGGCCTTCTaGACCACGGCATACCGACGC +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGPWAAF*TTAYRR
Trigger: GCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGG...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTTGTCTGCTCTCGGCCTaGCTGTGGGCGGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSACLLSA*LWAGGH
Trigger: ATGGCCACCCGCCCACAGCCAGGCCGAGAGCAGACA...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGGGACGCAGCGCTGCCTaGAACTCGCGCCGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWGRSAA*NSRREE
Trigger: CTCCTCGCGGCGCGAGTTTCAGGCAGCGCTGCGTCC...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310581.10
CDS-3UTR TCA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCAGCCTGTGGGGAAGTaGAGACGGCAGGTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSAQPVGK*RRQVCW
Trigger: CCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTG...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp AGGCCTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGAAGCCGGGCTCCTGGTaGGGAAAAGCTGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RPRPNTHSGLRLPAVRAWKPGSW*GKAGPG
Trigger: CCCAGGGCCAGCTTTTCCTCACCAGGAGCCCGGCTT...CCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTCCAGGGCTTCCCACGTaGGCAGCAGGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCPGLPT*AAGRSA
Trigger: AGCGCTGCGTCCTGCTGCGCACGTGGGAAGCCCTGG...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCCGCTCGCACAGCCTCTaGAGCACTCGGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RAPACGEVKTAGVLDTQPRSHSL*STRATS
Trigger: GCTGGTGGCCCGAGTGCTGCAGAGGCTGTGCGAGCG...GGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCACACCTGCCAGGGGCTaGTGTGCTGGCGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRTPARG*CAGGAA
Trigger: AGCTGCTCCGCCAGCACAGCAGCCCCTGGCAGGTGT...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCTCCTCACGCAGACGGTaGTCTGCGGCCGGAACACAG +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGSSRRR*SAAGTQ
Trigger: CTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGA...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCACGCAGCACGAAGGTaGGCCAGGCCCTGTGGATAT +
Preference number: 4 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELHAARR*ARPCGY
Trigger: ATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTG...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCCGCCGTAGCACAGGCTaGAGAGCAGCGTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGRRSTG*RAAWRG
Trigger: TCCTCTCCACGCTGCTCTGCAGCCTGTGCTACGGCG...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CACTCGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCCAGTGCCGGGTTGGCTaGGGCCTCCAGGGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: HSLRPQPDTQPSAGHAGLQCRVG*GLQGSQ
Trigger: CTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG...GAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp AGTGCACCAGGCGGGTCTCTGCAGGCACCCTCGCCAGAGCGTCTGTGCTTCCAGTTCAGGCAGGACACCTaGCGGAAGGAGGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SAPGGSLQAPSPERLCFQFRQDT*RKEGAA
Trigger: CGCCGCCCCCTCCTTCCGCCAGGTGTCCTGCCTGAA...CTGGAAGCACAGACGCTCTGGCGAGGGTGCCTGCAGAGACCCGCCTGGTGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCACGCCTGGGCCTCTTaGGCAACGGCAGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRHAWAS*ATADFG
Trigger: GCCGAAGTCTGCCGTTGCCCAAGAGGCCCAGGCGTG...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCGGCCCACGGATGGGTaGGAGTGGCGCGTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTRPTDG*EWRVPE
Trigger: CTCTGGCACGCGCCACTCCCACCCATCCGTGGGCCG...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCTGGAACCCAGAAAGATaGTCTCCACGAGCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLWNPER*SPRASE
Trigger: CTCGGAGGCTCGTGGAGACCATCTTTCTGGGTTCCA...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCACAGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCGTGCGCCAGGCCCTGTaGATATCGTCCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PTGTPIQVQGPRLCTGHTVRQAL*ISSRPS
Trigger: GCTGGGCCTGGACGATATCCACAGGGCCTGGCGCAC...GGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCTTGCGGACGTGCCCATaGGCGGCCTTCTGGACCACG +
Preference number: 4 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPLRTCP*AAFWTT
Trigger: CGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAA...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCACAGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTGCGGACGTGCCCATaGGCGGCCTTCTGGACCACG +
Preference number: 4 (lower is better)
Translates to: PTGTPIQVQGPRLCTGHTLRTCP*AAFWTT
Trigger: CGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAA...GGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCACACGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCTGTCTGCTCTCGGCCTaGCTGTGGGCGGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RTRSTKVRQALWISSRPSCLLSA*LWAGGH
Trigger: ATGGCCACCCGCCCACAGCCAGGCCGAGAGCAGACA...GCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTGGGTCTCCACCTGGATaGTGGGGGTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELGSPPG*WGWKAK
Trigger: CTTTGCCTTCCACCCCCACCATCCAGGTGGAGACCC...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAACACCGGCTGCTGGGGTaGCCGCAGCTCGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEEHRLLG*PQLAAG
Trigger: GCCCGCTGCGAGCTGCGGTCACCCCAGCAGCCGGTG...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp TTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCCGTCAGGCTTGGGGATaGAGCGGAGTCTGGACGTCA +
Preference number: 4 (lower is better)
Translates to: LAAASRAVSVVPGSFRLSRQAWG*SGVWTS
Trigger: TGACGTCCAGACTCCGCTTCATCCCCAAGCCTGACG...GCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACAGCAGGACGCAGCGCTaGCTGAAACTCGCGCCGCGA +
Preference number: 4 (lower is better)
Translates to: GLSRTLSLQPDMQASAKHSRTQR*LKLAPR
Trigger: TCGCGGCGCGAGTTTCAGGCAGCGCTGCGTCCTGCT...GTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310581.10
CDS-3UTR GCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCGCTCGCACAGCCTCTaGAGCACTCGGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTRSHSL*STRATS
Trigger: GCTGGTGGCCCGAGTGCTGCAGAGGCTGTGCGAGCG...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACTCACTCAGACTTCGGCTGGCACTaGCCCCGCGCCTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: AGHSAFSRTCRPRPNTHSDFGWH*PRASSH
Trigger: GTGCGAGGAGGCGCGGGGGCAGTGCCAGCCGAAGTC...TGAGTGAGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCTCCTCACGCAGACGGTaGTCTGCGGCCGGAACACAG +
Preference number: 4 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPSSRRR*SAAGTQ
Trigger: CTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGA...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCCACGCAGCACGAAGGTaGGCCAGGCCCTGTGGATAT +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGHAARR*ARPCGY
Trigger: ATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTG...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACAAGGCCTTGCGGACGTaGCCATGGGCGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNKALRT*PWAAFW
Trigger: CCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTT...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACGAGAGGATGGAGCCCTaGGGGATCCCCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNERMEP*GIPWHW
Trigger: CCAGTGCCAGGGGATCCCGCAGGGCTCCATCCTCTC...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CCCACAGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCCGCCGTAGCACAGGCTaGAGAGCAGCGTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PTGTPIQVQGPRLCTGHTRRSTG*RAAWRG
Trigger: TCCTCTCCACGCTGCTCTGCAGCCTGTGCTACGGCG...GGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTCGTCGGTCACCGTGTTaGGCAGGTAGCTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCRRSPC*AGSCAR
Trigger: GCGTGCGCAGCTACCTGCCCAACACGGTGACCGACG...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAGTGGCAGCGCCGAGCTaGTACAGCGGCGGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPVAAPS*YSGGPH
Trigger: GTGCGGGCCGCCGCTGTACCAGCTCGGCGCTGCCAC...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTCCTGGCGGCCCACGGATaGGTGGGAGTGGCGCGTGCC +
Preference number: 4 (lower is better)
Translates to: WGSEDGRCAGHSALGWTLLAAHG*VGVARA
Trigger: GGCACGCGCCACTCCCACCCATCCGTGGGCCGCCAG...GAGTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCTCCGTGAGCCTGTCCTaGGGGATGGTGTCGTACGCG +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRSVSLS*GMVSYA
Trigger: CGCGTACGACACCATCCCCCAGGACAGGCTCACGGA...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCACAGAGCCATGGGCGGCCTTCTaGACCACGGCATACCGACGC +
Preference number: 4 (lower is better)
Translates to: RSTKVRQALWISSRPSTEPWAAF*TTAYRR
Trigger: GCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGG...CTCTGTGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCATCCCTCAGCGGGCTaGTCTCCTGCAGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRHPSAG*SPAGEP
Trigger: TGGCTCACCTGCAGGAGACCAGCCCGCTGAGGGATG...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGCTGCAGAGCAGCGTaGAGAGGATGGAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCGCRAA*RGWSPA
Trigger: CGCAGGGCTCCATCCTCTCCACGCTGCTCTGCAGCC...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTAGACGGCAGGTGTGCTaGACACTCAGCCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSARRQVC*TLSPWL
Trigger: CAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCT...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACCCGAGCGCCAGCCTGTaGGGAAGTGAAGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNPSASL*GSEDGR
Trigger: CCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGG...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCTGGTGAGGAAAAGCTaGCCCTGGGGTGGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRLVRKS*PWGGAE
Trigger: CTCGGCTCCACCCCAGGGCCAGCTTTTCCTCACCAG...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp GGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTGCTGCTCCTTGTCGCCTaGGGAGTAGAGGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GCGLQGSQRRPRELPTQLLLLVA*GVEEVL
Trigger: AAGCACTTCCTCTACTCCTCAGGCGACAAGGAGCAG...CAGCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCTTCACCCTCGAGGTaGGACGCTCGGCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRPSPSR*DARPSF
Trigger: AAAAGAGGGCCGAGCGTCTCACCTCGAGGGTGAAGG...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CGCACACGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCCGGCGTGGTGGCACATaGAGCGTAGGAAGACGTCGA +
Preference number: 4 (lower is better)
Translates to: RTRSTKVRQALWISSRPSRRGGT*SVGRRR
Trigger: TCGACGTCTTCCTACGCTTCATGTGCCACCACGCCG...GCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCGGAGTGGCACGTAGGTaGCACGGTGTCGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPGVARR*HGVESA
Trigger: AGCTGACTCGACACCGTGTCACCTACGTGCCACTCC...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCACCTCGCGGTAGTGGCTaGGCAGCAGGGAGCGCACGG +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPPRGSG*AAGSAR
Trigger: CCGTGCGCTCCCTGCTGCGCAGCCACTACCGCGAGG...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACACGAAGCCGTACACCTaGCAGGGGCTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLSRTLSLQPDMQASAKHTKPYT*QGLLCW
Trigger: CCAGCACAGCAGCCCCTGGCAGGTGTACGGCTTCGT...GTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTAAGCGGCGTTCGTTGTaGCTGGAGCCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCKRRSL*LEPQRP
Trigger: AGGCCTCTGGGGCTCCAGGCACAACGAACGCCGCTT...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGACAGCTCCCGCAGCTaGACCCTCTTCAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GWLRPPGQSASSPGASDSDSSRS*TLFKCC
Trigger: ACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTC...TGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTGACAGCTCCCGCAGCTaGACCCTCTTCAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSADSSRS*TLFKCC
Trigger: ACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTC...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCCGGCCCTCTTTTCTCTaGGGAACGTTCTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RSGLSRTLSLQPDMQASARPSFL*GTFWLP
Trigger: TGGGAGCCAGAACGTTCCGCAGAGAAAAGAGGGCCG...GGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTGCGGCCGGAACGAGAGGATGGAGCCCTaGGGGATCCCCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VQELGQDLLTQTVLCGRNERMEP*GIPWHW
Trigger: CCAGTGCCAGGGGATCCCGCAGGGCTCCATCCTCTC...GTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTAGGGCTGCTGGTGTCTaGTCTCGGCCTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTRAAGV*SRPGCG
Trigger: CCCACAGCCAGGCCGAGAGCAGACACCAGCAGCCCT...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GCTGGCGATGACCTCCGTGAGCCTGTCCTGGGGGATGGTGTCGTACGCGCCCGTGACACTTCTCCCCATTaGCGGCAACCCGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: AGDDLREPVLGDGVVRARDTSPH*RQPGST
Trigger: AGTGGAGCCGGGTTGCCGGCAATGGGGAGAAGTGTC...ACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCACGCACACCAGGCACTaGGCCACCAGCGCGCGGAAA +
Preference number: 4 (lower is better)
Translates to: PSLEAAVEGETGSDGGPGTHTRH*ATSARK
Trigger: TTTCCGCGCGCTGGTGGCCCAGTGCCTGGTGTGCGT...GCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCACAGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCCCTGGTAGGCGCAGCTaGGAGCCACCAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: PTGTPIQVQGPRLCTGHTPGRRS*EPPAQR
Trigger: TCTTTGTGCTGGTGGCTCCCAGCTGCGCCTACCAGG...GGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGCCGCGGGGGGCCGGGCCTGAGTaGCAGCGCCGAGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RKTPKSLRRMFLPALKPRGAGPE*QRRAGT
Trigger: TGTACCAGCTCGGCGCTGCCACTCAGGCCCGGCCCC...CCGCGGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCACGCCTGGGCCTCTTaGGCAACGGCAGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTHAWAS*ATADFG
Trigger: GCCGAAGTCTGCCGTTGCCCAAGAGGCCCAGGCGTG...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACGGGCAGCGCCACGCCTaGGCCTCTTGGGCAACGGCA +
Preference number: 4 (lower is better)
Translates to: CGEVKTAGVLDTQPLAGHGQRHA*ASWATA
Trigger: TGCCGTTGCCCAAGAGGCCCAGGCGTGGCGCTGCCC...GTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTTCTTCGGCGGGTCTaGCAGGTGACACCACACAGA +
Preference number: 4 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSALLRRV*QVTPHR
Trigger: TCTGTGTGGTGTCACCTGCCAGACCCGCCGAAGAAG...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTCTGGCCGCGATGTGGATaGGGGGCCCGCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WGSEDGRCAGHSALGWTLWPRCG*GARVVL
Trigger: CAGCACCACGCGGGCCCCCCATCCACATCGCGGCCA...GAGTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCACAGACACCGGCTGCTaGGGTGACCGCAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PSLEAAVEGETGSDGGPGTDTGC*GDRSSQ
Trigger: CTGCGAGCTGCGGTCACCCCAGCAGCCGGTGTCTGT...GCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTTCCGTGAGCCTGTCCTaGGGGATGGTGTCGTACGCG +
Preference number: 4 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCSVSLS*GMVSYA
Trigger: CGCGTACGACACCATCCCCCAGGACAGGCTCACGGA...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTGCGGCCGGAACGCAGCGTGGAGAGGATaGAGCCCTGCGGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: VQELGQDLLTQTVLCGRNAAWRG*SPAGSP
Trigger: AGGGGATCCCGCAGGGCTCCATCCTCTCCACGCTGC...GTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCACAGAGCTCAGGGTCTCCACCTaGATGGTGGGGGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RSTKVRQALWISSRPSTELRVST*MVGVEG
Trigger: GCCTTCCACCCCCACCATCCAGGTGGAGACCCTGAG...CTCTGTGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCACAGCGTGCCAGCAGGTaGACCAGCACGTCGTCGCCC +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPQRASR*TSTSSP
Trigger: GGGCGACGACGTGCTGGTTCACCTGCTGGCACGCTG...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTAGGAGCTCTGCTCGATaGCGACGGCATCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTRSSAR*RRHPSA
Trigger: CGCTGAGGGATGCCGTCGTCATCGAGCAGAGCTCCT...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACCGGCGTGGTGGCACATaGAGCGTAGGAAGACGTCGA +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNRRGGT*SVGRRR
Trigger: TCGACGTCTTCCTACGCTTCATGTGCCACCACGCCG...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp AGGCCTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGTGCAGCACACATGCGTaGAACCTGTACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RPRPNTHSGLRLPAVRAWCSTHA*NLYACS
Trigger: GCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCA...CCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp TTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCAGGCCGTGTCAGAGATaGCGCGCAGGAAAAATGTGG +
Preference number: 4 (lower is better)
Translates to: LAAASRAVSVVPGSFRLSRPCQR*RAGKMW
Trigger: CCACATTTTTCCTGCGCGTCATCTCTGACACGGCCT...GCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACGGAGTGGCACGTAGGTaGCACGGTGTCGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLSRTLSLQPDMQASAKHGVARR*HGVESA
Trigger: AGCTGACTCGACACCGTGTCACCTACGTGCCACTCC...GTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp AGGCCTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGAGTCCAGGATGGTCTTaGAGTCTGAGGGCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: RPRPNTHSGLRLPAVRAWSPGWS*SLRAVP
Trigger: CGGCACTGCCCTCAGACTTCAAGACCATCCTGGACT...CCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTACGAAGCCGTACACCTaGCAGGGGCTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTTKPYT*QGLLCW
Trigger: CCAGCACAGCAGCCCCTGGCAGGTGTACGGCTTCGT...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCTTCCACGTCAGCTCCTaGAGCGAGAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPFHVSS*SESLAC
Trigger: GCATGCCAAGCTCTCGCTGCAGGAGCTGACGTGGAA...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCATCCTCACGCAGACGGTaGTCTGCGGCCGGAACACAG +
Preference number: 4 (lower is better)
Translates to: EPSASLWGSEDGRCAGHSSSRRR*SAAGTQ
Trigger: CTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGA...TGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACCTGGCTTCCCGATGCTaGCTGACCTCTGCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: GLSRTLSLQPDMQASAKHLASRC*LTSASD
Trigger: GTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGCCAG...GTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCCTGGCTTCCCGATGCTaGCTGACCTCTGCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: RAPACGEVKTAGVLDTQPLASRC*LTSASD
Trigger: GTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGCCAG...GGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CGCACACGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCCGGCCCTCTTTTCTCTaGGGAACGTTCTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RTRSTKVRQALWISSRPSRPSFL*GTFWLP
Trigger: TGGGAGCCAGAACGTTCCGCAGAGAAAAGAGGGCCG...GCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp GCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACTCACTCAAAGGCCTTGCGGACGTaGCCATGGGCGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AGHSAFSRTCRPRPNTHSKALRT*PWAAFW
Trigger: CCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTT...TGAGTGAGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GCTGGCGATGACCTCCGTGAGCCTGTCCTGGGGGATGGTGTCGTACGCGCCCGTAGCTTCCGACTCAGCTaGGTCTGGGCTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: AGDDLREPVLGDGVVRARSFRLS*VWAVLS
Trigger: ACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCT...ACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGCCTTCAGCCGGACATaGAGGCCTCGGCCAAACACT +
Preference number: 4 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCAFSRT*RPRPNT
Trigger: AGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGC...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCACCTCACCTGGGCTCCTaGGCAGCCAAGCGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPPHLGS*AAKRSP
Trigger: GGGACTGCGCTTGGCTGCGCAGGAGCCCAGGTGAGG...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTCCTGGTAGGCGCAGCTaGGAGCCACCAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCPGRRS*EPPAQR
Trigger: TCTTTGTGCTGGTGGCTCCCAGCTGCGCCTACCAGG...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CATCCCTGCGTTCTTGGCTTTCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGAGTGGCAGCGCCGAGCTaGTACAGCGGCGGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: HPCVLGFQDGVAEGGRVRVAAPS*YSGGPH
Trigger: GTGCGGGCCGCCGCTGTACCAGCTCGGCGCTGCCAC...TCTGACACGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGAACGCAGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CGGAACACAGCCAACCCGGGCCAAGATGACCGCCCTCCTCGTGAGTCTCCACATACGGATGGGTGGGAGTaGCGCGTGCCAGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: RNTANPGQDDRPPRESPHTDGWE*RVPESA
Trigger: TGCGCTCTCTGGCACGCGCCACTCCCACCCATCCGT...ATGTGGAGACTCACGAGGAGGGCGGTCATCTTGGCCCGGGTTGGCTGTGTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCCTGGCATCCAGGGCCTaGAACCCAGAAAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGLASRA*NPERWS
Trigger: AGACCATCTTTCTGGGTTCCAGGCCCTGGATGCCAG...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCACCTGCGGGGAGTCCCTaGCATCCAGGGCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPPAGSP*HPGPGT
Trigger: GGTTCCAGGCCCTGGATGCCAGGGACTCCCCGCAGG...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCGTCAAGGTAGAGACGTaGCTCTTGAAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGVKVET*LLKALR
Trigger: CCGCAAGGCCTTCAAGAGCCACGTCTCTACCTTGAC...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTGTTGGTGCACACCGTCTaGAGGCTGTTCACCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GCGLQGSQRRPRELPTQLLVHTV*RLFTCK
Trigger: TTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAA...CAGCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp ATGAAGCGGAGTCTGGACGTCAGCAGGGCGGGCCTGGCTTCCCGATGCTGCCTGAGACGGCAGGTGTGCTaGACACTCAGCCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: MKRSLDVSRAGLASRCCLRRQVC*TLSPWL
Trigger: CAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCT...CAGGCAGCATCGGGAAGCCAGGCCCGCCCTGCTGACGTCCAGACTCCGCTTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp GCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACTCACTCAAGGAAAAGCTGGCCCTaGGGTGGAGCCGAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: AGHSAFSRTCRPRPNTHSRKSWP*GGAERQ
Trigger: CTGGCGCTCGGCTCCACCCCAGGGCCAGCTTTTCCT...TGAGTGAGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp GGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAAGGGACCCCGGCCTCCCTaGCGCTATGGTTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GMDYSYVGSGSRAPGEEKGPRPP*RYGSRP
Trigger: GGGCCTGGAACCATAGCGTCAGGGAGGCCGGGGTCC...CTTTTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTACTTCTTGGTGTTCCTaGGGAAGCGGCGTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSATSWCS*GSGVRC
Trigger: ACAACGAACGCCGCTTCCTCAGGAACACCAAGAAGT...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAACGTAGGACTTGCCCCTaGTGCGCACGGCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEERRTCP*CARRGG
Trigger: GCCACCACGCCGTGCGCATCAGGGGCAAGTCCTACG...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp TTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTTCGCGTGGGTGAGGTaGGGTGTCACCAACAAGAAA +
Preference number: 4 (lower is better)
Translates to: LAAASRAVSVVPGSFRLSFAWVR*GVTNKK
Trigger: TTTCTTGTTGGTGACACCTCACCTCACCCACGCGAA...GCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCAGGTTTTCGCGTGGGTaGGGTGAGGTGTCACCAACA +
Preference number: 4 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPRFSRG*GEVSPT
Trigger: TGTTGGTGACACCTCACCTCACCCACGCGAAAACCT...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCTCCAGAAACAGGCTGTaGCACTTCAGCCGCAAGACC +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRSRNRL*HFSRKT
Trigger: GGTCTTGCGGCTGAAGTGTCACAGCCTGTTTCTGGA...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCGGTGTCGAGTCAGCTTaGGCAGGAATGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RAPACGEVKTAGVLDTQPGVESA*AGMLGG
Trigger: GCCACCAAGCATTCCTGCTCAAGCTGACTCGACACC...GGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCACAGAGGGTGTCGAGTCAGCTTaGGCAGGAATGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSTKVRQALWISSRPSTEGVESA*AGMLGG
Trigger: GCCACCAAGCATTCCTGCTCAAGCTGACTCGACACC...CTCTGTGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp AGTGCACCAGGCGGGTCTCTGCAGGCACCCTCGCCAGAGCGTCTGTGCTTCCAGAGTCCAGGATGGTCTTaGAGTCTGAGGGCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: SAPGGSLQAPSPERLCFQSPGWS*SLRAVP
Trigger: CGGCACTGCCCTCAGACTTCAAGACCATCCTGGACT...CTGGAAGCACAGACGCTCTGGCGAGGGTGCCTGCAGAGACCCGCCTGGTGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGAAAGAGCGCGCAGCGTaGCAGCAGGTGAACCAGCAC +
Preference number: 4 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWKERAA*QQVNQH
Trigger: GTGCTGGTTCACCTGCTGGCACGCTGCGCGCTCTTT...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GATGGAGGTCCGGGCATAGCTGAGGAAGGTTTTCGCGTGGGTGAGGTGAGGTGTGGCACAGACACCGGCTaGTGGGGTGACCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: DGGPGIAEEGFRVGEVRCGTDTG*WGDRSS
Trigger: CGAGCTGCGGTCACCCCAGCAGCCGGTGTCTGTGCC...ACACCTCACCTCACCCACGCGAAAACCTTCCTCAGCTATGCCCGGACCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR GCA 90 bp CGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGCCGCGGACACCTGCCAGGGGCTaGTGTGCTGGCGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RKTPKSLRRMFLPALKPRTPARG*CAGGAA
Trigger: AGCTGCTCCGCCAGCACAGCAGCCCCTGGCAGGTGT...CCGCGGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCATGGTGGCACAGCCACTaGACGGCCTCGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPWWHSH*TASEGR
Trigger: TCTGCCCTCCGAGGCCGTGCAGTGGCTGTGCCACCA...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CACTCGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCAGCTTCCGACTCAGCTaGGTCTGGGCTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HSLRPQPDTQPSAGHAGLSFRLS*VWAVLS
Trigger: ACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCT...GAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp ATGAAGCGGAGTCTGGACGTCAGCAGGGCGGGCCTGGCTTCCCGATGCTGCCTGTCGCCAGAGCGTCTGTaGTTCCAGACACTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: MKRSLDVSRAGLASRCCLSPERL*FQTLLP
Trigger: GGGGAGAAGTGTCTGGAAGCACAGACGCTCTGGCGA...CAGGCAGCATCGGGAAGCCAGGCCCGCCCTGCTGACGTCCAGACTCCGCTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CAAAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCGGGTCCACTAGCGTGTaGCGGGGGCCGGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QRRAGRGVNNGESGDGLFGSTSV*RGPGLS
Trigger: ACTCAGGCCCGGCCCCCGCCACACGCTAGTGGACCC...GAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGGCCTCCCTGACGCTATaGTTCCAGGCCCGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWASLTL*FQARSH
Trigger: ATGCGAACGGGCCTGGAACCATAGCGTCAGGGAGGC...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CAAAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCACGGCAGACTTCGGCTaGCACTGCCCCCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QRRAGRGVNNGESGDGLFTADFG*HCPRAS
Trigger: GGAGGCGCGGGGGCAGTGCCAGCCGAAGTCTGCCGT...GAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GAGTGGCACGTAGGTGACACGGTGTCGAGTCAGCTTGAGCAGGAATGCTTGGTGGGGCAGCGCCACGCCTaGGCCTCTTGGGCAACGGCA +
Preference number: 4 (lower is better)
Translates to: EWHVGDTVSSQLEQECLVGQRHA*ASWATA
Trigger: TGCCGTTGCCCAAGAGGCCCAGGCGTGGCGCTGCCC...CACCAAGCATTCCTGCTCAAGCTGACTCGACACCGTGTCACCTACGTGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAGTCCCAGGGACGTGGTaGCCGCGATGTGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEEVPGTW*PRCGWG
Trigger: CCCCCATCCACATCGCGGCCACCACGTCCCTGGGAC...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTCACAGACACCGGCTGCTaGGGTGACCGCAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: WGSEDGRCAGHSALGWTLTDTGC*GDRSSQ
Trigger: CTGCGAGCTGCGGTCACCCCAGCAGCCGGTGTCTGT...GAGTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CACTCGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCCTCTGCGGAACGTTCTaGCTCCCACGACGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: HSLRPQPDTQPSAGHAGLLCGTF*LPRRSP
Trigger: TGGACTACGTCGTGGGAGCCAGAACGTTCCGCAGAG...GAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACGCCTGTCCTGGGGGATaGTGTCGTACGCGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: CGEVKTAGVLDTQPLAGHACPGG*CRTRPS
Trigger: TGACGGGCGCGTACGACACCATCCCCCAGGACAGGC...GTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTTGCGGACGTGCCCATaGGCGGCCTTCTGGACCACG +
Preference number: 4 (lower is better)
Translates to: CGEVKTAGVLDTQPLAGHLRTCP*AAFWTT
Trigger: CGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAA...GTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACTCACTCACATCCCTCAGCGGGCTaGTCTCCTGCAGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: AGHSAFSRTCRPRPNTHSHPSAG*SPAGEP
Trigger: TGGCTCACCTGCAGGAGACCAGCCCGCTGAGGGATG...TGAGTGAGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACGCAGCGTGGAGAGGATaGAGCCCTGCGGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: CGEVKTAGVLDTQPLAGHAAWRG*SPAGSP
Trigger: AGGGGATCCCGCAGGGCTCCATCCTCTCCACGCTGC...GTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCTCTTGGCTTTCAGGATaGAGTAGCAGAGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRSWLSG*SSRGRP
Trigger: CGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGA...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGTGCCGGGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTACATCCCTGCGTTCTTaGCTTTCAGGATGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QCRVGCGLQGSQRRPRELTSLRS*LSGWSS
Trigger: GCTACTCCATCCTGAAAGCCAAGAACGCAGGGATGT...AAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp TGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACCCGAGCGCCAGCCTGTaGGGAAGTGAAGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: CGEVKTAGVLDTQPLAGHPSASL*GSEDGR
Trigger: CCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGG...GTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCTGGACTATTCCTATGTaGGGAGTGGAAGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPWTIPM*GVEAGL
Trigger: GAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCA...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp GAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGGGTCTCCACCTGGATaGTGGGGGTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: EPSASLWGSEDGRCAGHSGSPPG*WGWKAK
Trigger: CTTTGCCTTCCACCCCCACCATCCAGGTGGAGACCC...TGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp GAGTGGCACGTAGGTGACACGGTGTCGAGTCAGCTTGAGCAGGAATGCTTGGTGCAGCGTGCCAGCAGGTaGACCAGCACGTCGTCGCCC +
Preference number: 4 (lower is better)
Translates to: EWHVGDTVSSQLEQECLVQRASR*TSTSSP
Trigger: GGGCGACGACGTGCTGGTTCACCTGCTGGCACGCTG...CACCAAGCATTCCTGCTCAAGCTGACTCGACACCGTGTCACCTACGTGCCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAGGCGGGTCTGGCAGGTaGCACCACACAGAAACCACG +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPGGSGR*HHTETT
Trigger: CGTGGTTTCTGTGTGGTGTCACCTGCCAGACCCGCC...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTCTGCTCCTTGTCGCCTaGGGAGTAGAGGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCLLLVA*GVEEVL
Trigger: AAGCACTTCCTCTACTCCTCAGGCGACAAGGAGCAG...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACCCGTCACATCCACCTTaGCAAAGTACAGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNPSHPP*QSTAQA
Trigger: CGCCTGAGCTGTACTTTGTCAAGGTGGATGTGACGG...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACAGGTTTTCGCGTGGGTaGGGTGAGGTGTCACCAACA +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNRFSRG*GEVSPT
Trigger: TGTTGGTGACACCTCACCTCACCCACGCGAAAACCT...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGCCGCGGCCACGTGTGCCCACGTaGCGATGGAGACAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RKTPKSLRRMFLPALKPRPRVPT*RWRQED
Trigger: GTCCTCCTGTCTCCATCGTCACGTGGGCACACGTGG...CCGCGGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGTCGGTCCACGCGTCCTaGCCGGGTGGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLSVHAS*PGGPRT
Trigger: GGTCCTGGGCCCACCCGGGCAGGACGCGTGGACCGA...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CATCCCTGCGTTCTTGGCTTTCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGAGGTGGGAGTGGCGCGTaGCAGAGAGCGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: HPCVLGFQDGVAEGGRVRGGSGA*QRAHPP
Trigger: TGGAGGGTGCGCTCTCTGGCACGCGCCACTCCCACC...TCTGACACGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGAACGCAGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAAGGAGGGCCGCAGCTaGTCCTTGTCGCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPKEGRS*SLSPEE
Trigger: CTCCTCAGGCGACAAGGAGCAGCTGCGGCCCTCCTT...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCATTCCACGTCAGCTCCTaGAGCGAGAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: EPSASLWGSEDGRCAGHSFHVSS*SESLAC
Trigger: GCATGCCAAGCTCTCGCTGCAGGAGCTGACGTGGAA...TGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTGAGAGGATGGAGCCCTaGGGGATCCCCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VPPSLEAAVEGETGSDGGERMEP*GIPWHW
Trigger: CCAGTGCCAGGGGATCCCGCAGGGCTCCATCCTCTC...ACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCTCTTGTAGATGTTGGTaGACACCGTCTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGSCRCW*TPSGGC
Trigger: ACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp TTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTCTTGTAGATGTTGGTaGACACCGTCTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LAAASRAVSVVPGSFRLSSCRCW*TPSGGC
Trigger: ACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA...GCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CGCCAGAGCGTCTGTGCTTCCAGACACTTCTCCCCATTGCCGGCAACCCGGCTCGCGAAAAGCCACGTGTaGCCACGTGACGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: RQSVCASRHFSPLPATRLAKSHV*PRDDGD
Trigger: GTCTCCATCGTCACGTGGGCACACGTGGCTTTTCGC...GAGCCGGGTTGCCGGCAATGGGGAGAAGTGTCTGGAAGCACAGACGCTCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp ACGTCGCTAGATGCCATGGAGGCCAGCACAGGTAAAGCTGGGGTTTACCAGCAAGGGGCCGGGCCTGAGTaGCAGCGCCGAGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: TSLDAMEASTGKAGVYQQGAGPE*QRRAGT
Trigger: TGTACCAGCTCGGCGCTGCCACTCAGGCCCGGCCCC...TTGCTGGTAAACCCCAGCTTTACCTGTGCTGGCCTCCATGGCATCTAGCGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp ACGTCGCTAGATGCCATGGAGGCCAGCACAGGTAAAGCTGGGGTTTACCAGCAATGGCCGCGATGTGGATaGGGGGCCCGCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TSLDAMEASTGKAGVYQQWPRCG*GARVVL
Trigger: CAGCACCACGCGGGCCCCCCATCCACATCGCGGCCA...TTGCTGGTAAACCCCAGCTTTACCTGTGCTGGCCTCCATGGCATCTAGCGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CATCCCTGCGTTCTTGGCTTTCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGAGTCCCAGGGACGTGGTaGCCGCGATGTGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: HPCVLGFQDGVAEGGRVRVPGTW*PRCGWG
Trigger: CCCCCATCCACATCGCGGCCACCACGTCCCTGGGAC...TCTGACACGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGAACGCAGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGATGCGCACGGCGTGGTaGCACATGAAGCGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWMRTAW*HMKRRK
Trigger: CTTCCTACGCTTCATGTGCCACCACGCCGTGCGCAT...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCACAGAGTTGAGCAGGAATGCTTaGTGGCACAGCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: RSTKVRQALWISSRPSTELSRNA*WHSHCT
Trigger: CGTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAA...CTCTGTGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp TGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACCTGGCTGTGGGCGGGTaGCCATCAGTCCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: CGEVKTAGVLDTQPLAGHLAVGG*PSVQDG
Trigger: ACCATCCTGGACTGATGGCCACCCGCCCACAGCCAG...GTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTGGACTATTCCTATGTaGGGAGTGGAAGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RAPACGEVKTAGVLDTQPWTIPM*GVEAGL
Trigger: GAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCA...GGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACGCGAGGGGTGAACAATaGCGAATCTGGGGATGGACT +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNARGEQ*RIWGWT
Trigger: AGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGC...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR CAA 72 bp AGGTCTGTCAAGGTAGAGACGTGGCTCTTGAAGGCCTaGCGGACGTGCCCATGGGCGGCCTTCTGGACCACG +
Preference number: 4 (lower is better)
Translates to: RSVKVETWLLKA*RTCPWAAFWTT
Trigger: CGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGTCTCTACCTTGACAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCAGCGTGCCAGCAGGTaGACCAGCACGTCGTCGCCC +
Preference number: 4 (lower is better)
Translates to: TMANLGMDYSYVGSGSRAQRASR*TSTSSP
Trigger: GGGCGACGACGTGCTGGTTCACCTGCTGGCACGCTG...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGGCGGGCAGTGCGTCTTaGGGAGCACCCCGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLAGSAS*GAPRRG
Trigger: GCCCCTACGGGGTGCTCCTCAAGACGCACTGCCCGC...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp TTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCCATAAAAGAAAGACCTaGGCAGCTCGACGACGTACA +
Preference number: 4 (lower is better)
Translates to: LAAASRAVSVVPGSFRLSHKRKT*AARRRT
Trigger: TGTACGTCGTCGAGCTGCTCAGGTCTTTCTTTTATG...GCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCATAGCTGAGGAACCTTCACCCTCGAGGTaGGACGCTCGGCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: AAVEGETGSDGGPGIAEEPSPSR*DARPSF
Trigger: AAAAGAGGGCCGAGCGTCTCACCTCGAGGGTGAAGG...TTCCTCAGCTATGCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR TCA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAGGAGCTCTGCTCGATaGCGACGGCATCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEERSSAR*RRHPSA
Trigger: CGCTGAGGGATGCCGTCGTCATCGAGCAGAGCTCCT...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCCAGAAACAGGCTGTaGCACTTCAGCCGCAAGACC +
Preference number: 4 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWSRNRL*HFSRKT
Trigger: GGTCTTGCGGCTGAAGTGTCACAGCCTGTTTCTGGA...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp GAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAAGGCCGTGTCAGAGATaGCGCGCAGGAAAAATGTGG +
Preference number: 4 (lower is better)
Translates to: EPSASLWGSEDGRCAGHSRPCQR*RAGKMW
Trigger: CCACATTTTTCCTGCGCGTCATCTCTGACACGGCCT...TGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCAGGGCTTCCCACGTaGGCAGCAGGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: TMANLGMDYSYVGSGSRAPGLPT*AAGRSA
Trigger: AGCGCTGCGTCCTGCTGCGCACGTGGGAAGCCCTGG...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGCCTCGCGGTAGTGGCTaGGCAGCAGGGAGCGCACGG +
Preference number: 4 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLPRGSG*AAGSAR
Trigger: CCGTGCGCTCCCTGCTGCGCAGCCACTACCGCGAGG...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp AAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGTCTGGACTTCGGCTGGCACTaGCCCCGCGCCTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: KPVRLQQEDLVDVGAHRLDFGWH*PRASSH
Trigger: GTGCGAGGAGGCGCGGGGGCAGTGCCAGCCGAAGTC...CAGACGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CAGGCTGTGACACTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCAACCCCTGGGCTCCTaGGCAGCCAAGCGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QAVTLQPQDPKEFATHVPQPLGS*AAKRSP
Trigger: GGGACTGCGCTTGGCTGCGCAGGAGCCCAGGGGTTG...AGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR GCA 90 bp GTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTACGCAGACGGTGCTCTaGGGCCGGAACACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: VPPSLEAAVEGETGSDGGTQTVL*GRNTAN
Trigger: GTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGT...ACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCATCTGAACAAAAGCCGTaGCACCCAGGGCCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: EPSASLWGSEDGRCAGHSSEQKP*HPGPRL
Trigger: AAGACGAGGCCCTGGGTGGCACGGCTTTTGTTCAGA...TGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGGAGCTGCAGCACACATaGGTGAAACCTGTACGCCTG +
Preference number: 4 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWELQHT*VKPVRL
Trigger: CAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTC...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CATCCCTGCGTTCTTGGCTTTCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGATGGTGGCACAGCCACTaGACGGCCTCGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: HPCVLGFQDGVAEGGRVRWWHSH*TASEGR
Trigger: TCTGCCCTCCGAGGCCGTGCAGTGGCTGTGCCACCA...TCTGACACGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGAACGCAGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CGCCAGAGCGTCTGTGCTTCCAGACACTTCTCCCCATTGCCGGCAACCCGGCTCCAGCTTGAGCAGGAATaGTTGGTGGCACAGCCACTG +
Preference number: 4 (lower is better)
Translates to: RQSVCASRHFSPLPATRLQLEQE*LVAQPL
Trigger: CAGTGGCTGTGCCACCAAGCATTCCTGCTCAAGCTG...GAGCCGGGTTGCCGGCAATGGGGAGAAGTGTCTGGAAGCACAGACGCTCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTCAGACTCCCAGCGGTaGGGGCCTGGGTGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTSDSQR*GPGCGP
Trigger: CGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGA...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp ATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGCCTGCAGCAGGAGTTCAGGCAGGACACCTaGCGGAAGGAGGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: MKWELQHTCVKPVRLQQEFRQDT*RKEGAA
Trigger: CGCCGCCCCCTCCTTCCGCCAGGTGTCCTGCCTGAA...CTCCTGCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGTCTGGGGTCCACTAGCGTGTaGCGGGGGCCGGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: KPVRLQQEDLVDVGAHRLGSTSV*RGPGLS
Trigger: ACTCAGGCCCGGCCCCCGCCACACGCTAGTGGACCC...CAGACGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCCGGCCCACGGATGGGTaGGAGTGGCGCGTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: EAVSEMTRRKNVGFFQTCRPTDG*EWRVPE
Trigger: CTCTGGCACGCGCCACTCCCACCCATCCGTGGGCCG...GCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GGCATAGCTGAGGAAGGTTTTCGCGTGGGTGAGGTGAGGTGTCACCAACAAGAATGGCCGCGATGTGGATaGGGGGCCCGCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GIAEEGFRVGEVRCHQQEWPRCG*GARVVL
Trigger: CAGCACCACGCGGGCCCCCCATCCACATCGCGGCCA...TTCTTGTTGGTGACACCTCACCTCACCCACGCGAAAACCTTCCTCAGCTATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR CCA 90 bp GAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCCTATGCGTGTCCCAGGGACGTaGTGGCCGCGATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: EGRARGEQWRIWGWTIPMRVPGT*WPRCGW
Trigger: CCATCCACATCGCGGCCACCACGTCCCTGGGACACG...CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTTGGAACCCAGAAAGATaGTCTCCACGAGCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTWNPER*SPRASE
Trigger: CTCGGAGGCTCGTGGAGACCATCTTTCTGGGTTCCA...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTCCGAAGAGGCCACTGCTaGCCTCATTCAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: WGSEDGRCAGHSALGWTLRRGHC*PHSGRS
Trigger: GCTCCTCCCTGAATGAGGCCAGCAGTGGCCTCTTCG...GAGTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTGCGGCCGGAACTCTTGGCTTTCAGGATaGAGTAGCAGAGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VQELGQDLLTQTVLCGRNSWLSG*SSRGRP
Trigger: CGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGA...GTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAGCAGGAATGCTTGGTaGCACAGCCACTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPSRNAW*HSHCTA
Trigger: GGCCGTGCAGTGGCTGTGCCACCAAGCATTCCTGCT...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTCTGGACACTCAGCCCTTaGCTGGACACTCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WGSEDGRCAGHSALGWTLWTLSP*LDTRSG
Trigger: GCCTGAGCGAGTGTCCAGCCAAGGGCTGAGTGTCCA...GAGTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
3UTR CAA 72 bp TTGCGACGCATGTTCCTCCCAGCCTTGAAGCCGCGGTaGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LRRMFLPALKPR*KVRLALMEVRA
Trigger: TGCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACATGCGTCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp AGGCCTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGAAGAGCCTGTTCTTTTaGAACGTGGTCTCCGTGACA +
Preference number: 4 (lower is better)
Translates to: RPRPNTHSGLRLPAVRAWKSLFF*NVVSVT
Trigger: TGTCACGGAGACCACGTTTCAAAAGAACAGGCTCTT...CCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp GAACAGTGCCTTCACCCTCGAGGTGAGACGCTCGGCCCTCTTTTCTCTGCGGAACTTCCCGATGCTGCCTaGCCTCTGCTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: EQCLHPRGETLGPLFSAELPDAA*PLLPTA
Trigger: AGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAG...TTCCGCAGAGAAAAGAGGGCCGAGCGTCTCACCTCGAGGGTGAAGGCACTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCGTGGGCCGGCATCTaGACAAAAGCCGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: TMANLGMDYSYVGSGSRAPWAGI*TKAVPP
Trigger: GGGTGGCACGGCTTTTGTTCAGATGCCGGCCCACGG...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAAAGCCGGGCTCCTGGTaGGGAAAAGCTGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQPQDPKEFATHVPPSLEKPGSW*GKAGPG
Trigger: CCCAGGGCCAGCTTTTCCTCACCAGGAGCCCGGCTT...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTCGCTCGCACAGCCTCTaGAGCACTCGGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTRSHSL*STRATS
Trigger: GCTGGTGGCCCGAGTGCTGCAGAGGCTGTGCGAGCG...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CAAAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCAAGGAGGGCCGCAGCTaGTCCTTGTCGCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: QRRAGRGVNNGESGDGLFKEGRS*SLSPEE
Trigger: CTCCTCAGGCGACAAGGAGCAGCTGCGGCCCTCCTT...GAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp TGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAATTCCCAGAAGCGGCGTTCGTTGTaGCTGGAGCCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CRVLACVQGTPLVTPNSQKRRSL*LEPQRP
Trigger: AGGCCTCTGGGGCTCCAGGCACAACGAACGCCGCTT...CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp TGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAATTCCCAGACGCAGACGGTGCTCTaGGGCCGGAACACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: CRVLACVQGTPLVTPNSQTQTVL*GRNTAN
Trigger: GTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGT...CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAACACTCATCAGCCAGTaGAGGAACTTGGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: EPSASLWGSEDGRCAGHSTLISQ*RNLARI
Trigger: GATCCTGGCCAAGTTCCTGCACTGGCTGATGAGTGT...TGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGCCCGTCGAAGAGGCCACTaGTGGCCTCATTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QPQDPKEFATHVPPSLEARRRGH*WPHSGR
Trigger: CCTCCCTGAATGAGGCCAGCAGTGGCCTCTTCGACG...GGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAATGGTGGCACAGCCACTaGACGGCCTCGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LQPQDPKEFATHVPPSLEWWHSH*TASEGR
Trigger: TCTGCCCTCCGAGGCCGTGCAGTGGCTGTGCCACCA...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTCAGTGCCGGGTTGGCTaGGGCCTCCAGGGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTQCRVG*GLQGSQ
Trigger: CTGACTGCCCTGGAGGCCGCAGCCAACCCGGCACTG...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CAGGCTGTGACACTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTAGGGCTGCTGGTGTCTaGTCTCGGCCTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QAVTLQPQDPKEFATHVPRAAGV*SRPGCG
Trigger: CCCACAGCCAGGCCGAGAGCAGACACCAGCAGCCCT...AGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp GAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCCTATGGGACCCCCATCCAGGTaGAGGGTCCTCGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: EGRARGEQWRIWGWTIPMGPPSR*RVLACV
Trigger: TACACAGGCGAGGACCCTGCACCTGGATGGGGGTCC...CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp ACGCATGTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATCCGGACGTCGCTAGATaGCATGGAGGCCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: THVPPSLEAAVEGETGSDPDVAR*HGGQHR
Trigger: CCTGTGCTGGCCTCCATGGCATCTAGCGACGTCCGG...ATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACATGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGGCTGTGACACTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTACGGATGGGTGGGAGTaGCGCGTGCCAGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: QAVTLQPQDPKEFATHVPTDGWE*RVPESA
Trigger: TGCGCTCTCTGGCACGCGCCACTCCCACCCATCCGT...AGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp ATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGCCTGCAGCAGGAGGTGCGCCAGGCCCTGTaGATATCGTCCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: MKWELQHTCVKPVRLQQEVRQAL*ISSRPS
Trigger: GCTGGGCCTGGACGATATCCACAGGGCCTGGCGCAC...CTCCTGCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAATCAGGCGGCGGGTCCTaGGCCCGCACACGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LVDVGAHRLEAVHLQIQKSGGGS*ARTRST
Trigger: CGTGCTGCGTGTGCGGGCCCAGGACCCGCCGCCTGA...TTTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTACGCAGTACGTGTTCTaGGGTTTGATGATGCTGGCG +
Preference number: 4 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTTQYVF*GLMMLA
Trigger: CGCCAGCATCATCAAACCCCAGAACACGTACTGCGT...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGTGAAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGCCATGGGCGGCCTTCTaGACCACGGCATACCGACGC +
Preference number: 4 (lower is better)
Translates to: RETCTPAAGGSCRCWCTPPWAAF*TTAYRR
Trigger: GCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGG...CGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTCGAAGAGGCCACTGCTaGCCTCATTCAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VPPSLEAAVEGETGSDGGRRGHC*PHSGRS
Trigger: GCTCCTCCCTGAATGAGGCCAGCAGTGGCCTCTTCG...ACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCACATCCCTGCGTTCTTaGCTTTCAGGATGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RAPACGEVKTAGVLDTQPTSLRS*LSGWSS
Trigger: GCTACTCCATCCTGAAAGCCAAGAACGCAGGGATGT...GGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACTCACTCATTGAGCAGGAATGCTTaGTGGCACAGCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: AGHSAFSRTCRPRPNTHSLSRNA*WHSHCT
Trigger: CGTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAA...TGAGTGAGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAACCGCCCCTCCCTCCCTaGGACGTAGAGCCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: LVDVGAHRLEAVHLQIQKPPLPP*DVEPGV
Trigger: CACGCCGGGCTCTACGTCCCAGGGAGGGAGGGGCGG...TTTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp GGAAGTTCACCACTGTCTTCCGCAAGTTCACCACGCAGCCATACTCAGGGACACAGGAAAAGCTGGCCCTaGGGTGGAGCCGAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GSSPLSSASSPRSHTQGHRKSWP*GGAERQ
Trigger: CTGGCGCTCGGCTCCACCCCAGGGCCAGCTTTTCCT...GTGTCCCTGAGTATGGCTGCGTGGTGAACTTGCGGAAGACAGTGGTGAACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CAA 72 bp ACGGCATACCGACGCACGCAGTACGTGTTCTGGGGTTaGATGATGCTGGCGATGACCTCCGTGAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TAYRRTQYVFWG*MMLAMTSVSLS
Trigger: GGACAGGCTCACGGAGGTCATCGCCAGCATCATCAAACCCCAGAACACGTACTGCGTGCGTCGGTATGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACAAGAGCCTGTTCTTTTaGAACGTGGTCTCCGTGACA +
Preference number: 4 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNKSLFF*NVVSVT
Trigger: TGTCACGGAGACCACGTTTCAAAAGAACAGGCTCTT...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp TGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAATTCCCAGCGTCAGGCTTGGGGATaGAGCGGAGTCTGGACGTCA +
Preference number: 4 (lower is better)
Translates to: CRVLACVQGTPLVTPNSQRQAWG*SGVWTS
Trigger: TGACGTCCAGACTCCGCTTCATCCCCAAGCCTGACG...CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp GCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACTCACTCATTCGCGTGGGTGAGGTaGGGTGTCACCAACAAGAAA +
Preference number: 4 (lower is better)
Translates to: AGHSAFSRTCRPRPNTHSFAWVR*GVTNKK
Trigger: TTTCTTGTTGGTGACACCTCACCTCACCCACGCGAA...TGAGTGAGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp AGCTCCCGCAGCTGCACCCTCTTCAAGTGCTGTCTGATTCCAATGCTTTGCAACCCGTGGGCCGGCATCTaGACAAAAGCCGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: SSRSCTLFKCCLIPMLCNPWAGI*TKAVPP
Trigger: GGGTGGCACGGCTTTTGTTCAGATGCCGGCCCACGG...GTTGCAAAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp GAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCGGGCAGGGCGAGGGGTaGACAATGGCGAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: EAVSEMTRRKNVGFFQTCGQGEG*TMANLG
Trigger: CCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCC...GCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCATGAGGTTGAGGAATaGGAACTGCTTGAACCGAGG +
Preference number: 4 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTHEVEE*ELLEPR
Trigger: CCTCGGTTCAAGCAGTTCTCATTCCTCAACCTCATG...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp GTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTGAGCACGCTGAACAGTaGCTTCACCCTCGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VPPSLEAAVEGETGSDGGEHAEQ*LHPRGE
Trigger: CTCACCTCGAGGGTGAAGGCACTGTTCAGCGTGCTC...ACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCATAGCTGAGGAAGGTTTTCGCGTGGGTGAGGTGAGGTGTCACCAACAAGAAAAGGCCTTGCGGACGTaGCCATGGGCGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GIAEEGFRVGEVRCHQQEKALRT*PWAAFW
Trigger: CCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTT...TTCTTGTTGGTGACACCTCACCTCACCCACGCGAAAACCTTCCTCAGCTATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR GCA 90 bp TGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTCCCCCAGCGACATCCCTaGGTTCTTGGCTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: WGSEDGRCAGHSALGWTLPQRHP*VLGFQD
Trigger: ATCCTGAAAGCCAAGAACGCAGGGATGTCGCTGGGG...GAGTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCACAGCTTGAGCAGGAATaGTTGGTGGCACAGCCACTG +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPQLEQE*LVAQPL
Trigger: CAGTGGCTGTGCCACCAAGCATTCCTGCTCAAGCTG...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp GGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAAGGCCTTCAGCCGGACATaGAGGCCTCGGCCAAACACT +
Preference number: 4 (lower is better)
Translates to: GMDYSYVGSGSRAPGEEKAFSRT*RPRPNT
Trigger: AGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGC...CTTTTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGCCGCGGTTTCTGAGCCCCTACTaGATTCAGCTCTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RKTPKSLRRMFLPALKPRFLSPY*IQLWGL
Trigger: CAGGCCCCAGAGCTGAATGCAGTAGGGGCTCAGAAA...CCGCGGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGGCCTCCTCTGTTCACTaGTCTGGCCTCGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLASSVH*SGLGAW
Trigger: CCAGGCGCCGAGGCCAGAGCAGTGAACAGAGGAGGC...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp GGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAAGGCCTCCCTGACGCTATaGTTCCAGGCCCGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: GMDYSYVGSGSRAPGEEKASLTL*FQARSH
Trigger: ATGCGAACGGGCCTGGAACCATAGCGTCAGGGAGGC...CTTTTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAACGGCAGACTTCGGCTaGCACTGCCCCCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SCRCWCTPSGGCSPANPETADFG*HCPRAS
Trigger: GGAGGCGCGGGGGCAGTGCCAGCCGAAGTCTGCCGT...TTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCCACGCCTGGGCCTCTTaGGCAACGGCAGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: EAVSEMTRRKNVGFFQTCHAWAS*ATADFG
Trigger: GCCGAAGTCTGCCGTTGCCCAAGAGGCCCAGGCGTG...GCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CAAAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCCACCCTCCAAAGAGGTaGCTTCTTCGGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QRRAGRGVNNGESGDGLFHPPKR*LLRRVW
Trigger: CCAGACCCGCCGAAGAAGCCACCTCTTTGGAGGGTG...GAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGGCCGCCACAGAGCCCTaGGGCTTCTCCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: SKLADEMGAAAHMRETCTAATEP*GFSRAQ
Trigger: CTGTGCCCGGGAGAAGCCCCAGGGCTCTGTGGCGGC...CGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGCCGCCAGTGCAGGAACTTaGCCAGGATCTCCTCACGCA +
Preference number: 4 (lower is better)
Translates to: QPQDPKEFATHVPPSLEAASAGT*PGSPHA
Trigger: TGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGC...GGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTGTGCGCCAGGCCCTGTaGATATCGTCCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTVRQAL*ISSRPS
Trigger: GCTGGGCCTGGACGATATCCACAGGGCCTGGCGCAC...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTATGCGCACGGCGTGGTaGCACATGAAGCGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: VPPSLEAAVEGETGSDGGMRTAW*HMKRRK
Trigger: CTTCCTACGCTTCATGTGCCACCACGCCGTGCGCAT...ACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp TGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAATTCCCAGCTGATGCGCACGGCGTaGTGGCACATGAAGCGTAGG +
Preference number: 4 (lower is better)
Translates to: CRVLACVQGTPLVTPNSQLMRTA*WHMKRR
Trigger: CCTACGCTTCATGTGCCACCACGCCGTGCGCATCAG...CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCTCAGGGTCTCCACCTaGATGGTGGGGGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TMANLGMDYSYVGSGSRALRVST*MVGVEG
Trigger: GCCTTCCACCCCCACCATCCAGGTGGAGACCCTGAG...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGTGAAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGTACTGCATTCAGCTCTaGGGCCTGGGCCCTCGACGG +
Preference number: 4 (lower is better)
Translates to: RETCTPAAGGSCRCWCTPYCIQL*GLGPRR
Trigger: CCGTCGAGGGCCCAGGCCCCAGAGCTGAATGCAGTA...CGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp TGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAATTCCCAGTCTGGCCTCGGCGCCTaGAAACCGCGTGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: CRVLACVQGTPLVTPNSQSGLGA*KPRVHQ
Trigger: TTGATGGACACGCGGTTTCCAGGCGCCGAGGCCAGA...CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp GAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCACATAAAAGAAAGACCTaGGCAGCTCGACGACGTACA +
Preference number: 4 (lower is better)
Translates to: EPSASLWGSEDGRCAGHSHKRKT*AARRRT
Trigger: TGTACGTCGTCGAGCTGCTCAGGTCTTTCTTTTATG...TGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAACGTCAGGCTTGGGGATaGAGCGGAGTCTGGACGTCA +
Preference number: 4 (lower is better)
Translates to: LQPQDPKEFATHVPPSLERQAWG*SGVWTS
Trigger: TGACGTCCAGACTCCGCTTCATCCCCAAGCCTGACG...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GAGTGGCACGTAGGTGACACGGTGTCGAGTCAGCTTGAGCAGGAATGCTTGGTGTGCAGCACACATGCGTaGAACCTGTACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EWHVGDTVSSQLEQECLVCSTHA*NLYACS
Trigger: GCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCA...CACCAAGCATTCCTGCTCAAGCTGACTCGACACCGTGTCACCTACGTGCCACTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GGCATAGCTGAGGAAGGTTTTCGCGTGGGTGAGGTGAGGTGTCACCAACAAGAAGTAGGACGTGGCTCTTaGAGGCCTTGCGGACGTGCC +
Preference number: 4 (lower is better)
Translates to: GIAEEGFRVGEVRCHQQEVGRGS*RPCGRA
Trigger: GGCACGTCCGCAAGGCCTTCAAGAGCCACGTCCTAC...TTCTTGTTGGTGACACCTCACCTCACCCACGCGAAAACCTTCCTCAGCTATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR TCA 90 bp ACGTCGCTAGATGCCATGGAGGCCAGCACAGGTAAAGCTGGGGTTTACCAGCAAGTCCACTCGACGTCCTaGGCGAAAAGCCACGTGTGC +
Preference number: 4 (lower is better)
Translates to: TSLDAMEASTGKAGVYQQVHSTS*AKSHVC
Trigger: GCACACGTGGCTTTTCGCTCAGGACGTCGAGTGGAC...TTGCTGGTAAACCCCAGCTTTACCTGTGCTGGCCTCCATGGCATCTAGCGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp GGAAGTTCACCACTGTCTTCCGCAAGTTCACCACGCAGCCATACTCAGGGACACAAAGAGCGCGCAGCGTaGCAGCAGGTGAACCAGCAC +
Preference number: 4 (lower is better)
Translates to: GSSPLSSASSPRSHTQGHKERAA*QQVNQH
Trigger: GTGCTGGTTCACCTGCTGGCACGCTGCGCGCTCTTT...GTGTCCCTGAGTATGGCTGCGTGGTGAACTTGCGGAAGACAGTGGTGAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp GCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCAGCAGGCGGGGCAACCTaGGGGGAGTCCCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: AGKMWGSSKLADEMGAAAAGGAT*GESLAS
Trigger: GGATGCCAGGGACTCCCCGCAGGTTGCCCCGCCTGC...TGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp TGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGACACCTGCCAGGGGCTaGTGTGCTGGCGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CGVLPNLLMKWELQHTCVTPARG*CAGGAA
Trigger: AGCTGCTCCGCCAGCACAGCAGCCCCTGGCAGGTGT...CACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCCTATGGACAGCTCCCGCAGCTaGACCCTCTTCAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EGRARGEQWRIWGWTIPMDSSRS*TLFKCC
Trigger: ACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTC...CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTATGCTGCCTGACCTCTaGTTCCGACAGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TMANLGMDYSYVGSGSRAMLPDL*FRQLPQ
Trigger: CTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCAT...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAATGCTGCCTGACCTCTaGTTCCGACAGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LQPQDPKEFATHVPPSLEMLPDL*FRQLPQ
Trigger: CTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCAT...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAACTGGCTTCCCGATGCTaGCTGACCTCTGCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: LQPQDPKEFATHVPPSLELASRC*LTSASD
Trigger: GTCGGAAGCAGAGGTCAGGCAGCATCGGGAAGCCAG...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp ACGCATGTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATCGGCCCTCTTTTCTCTaGGGAACGTTCTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: THVPPSLEAAVEGETGSDRPSFL*GTFWLP
Trigger: TGGGAGCCAGAACGTTCCGCAGAGAAAAGAGGGCCG...ATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACATGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GGAAGTTCACCACTGTCTTCCGCAAGTTCACCACGCAGCCATACTCAGGGACACCACGCAGCACGAAGGTaGGCCAGGCCCTGTGGATAT +
Preference number: 4 (lower is better)
Translates to: GSSPLSSASSPRSHTQGHHAARR*ARPCGY
Trigger: ATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTG...GTGTCCCTGAGTATGGCTGCGTGGTGAACTTGCGGAAGACAGTGGTGAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGCGCCGTAGCACAGGCTaGAGAGCAGCGTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLRRSTG*RAAWRG
Trigger: TCCTCTCCACGCTGCTCTGCAGCCTGTGCTACGGCG...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTGAGCTGCAGCACACATaGGTGAAACCTGTACGCCTG +
Preference number: 4 (lower is better)
Translates to: VPPSLEAAVEGETGSDGGELQHT*VKPVRL
Trigger: CAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTC...ACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GATGGAGGTCCGGGCATAGCTGAGGAAGGTTTTCGCGTGGGTGAGGTGAGGTGTCAGCTTGAGCAGGAATaGTTGGTGGCACAGCCACTG +
Preference number: 4 (lower is better)
Translates to: DGGPGIAEEGFRVGEVRCQLEQE*LVAQPL
Trigger: CAGTGGCTGTGCCACCAAGCATTCCTGCTCAAGCTG...ACACCTCACCTCACCCACGCGAAAACCTTCCTCAGCTATGCCCGGACCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR GCA 90 bp GCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCAGCAACCCGGCTCCACTaGCGCGCCCAGCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGKMWGSSKLADEMGAAAATRLH*RAQPPL
Trigger: CAGAGGAGGCTGGGCGCGGCAGTGGAGCCGGGTTGC...TGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCAGAAATAAAAGCAAATaGCCAGTGACCAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPRNKSK*PVTRRQ
Trigger: TTGCCTCCTGGTCACTGGGCATTTGCTTTTATTTCT...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp ATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGCCTGCAGCAGGAGCCTGGTAGGCGCAGCTaGGAGCCACCAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: MKWELQHTCVKPVRLQQEPGRRS*EPPAQR
Trigger: TCTTTGTGCTGGTGGCTCCCAGCTGCGCCTACCAGG...CTCCTGCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp TCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAGTCCCAGGGACGTGGTaGCCGCGATGTGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: SCRCWCTPSGGCSPANPEVPGTW*PRCGWG
Trigger: CCCCCATCCACATCGCGGCCACCACGTCCCTGGGAC...TTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAAGAGTAGAGGAAGTGCTTaGTCTCGGCGTACACCGGGG +
Preference number: 4 (lower is better)
Translates to: GMDYSYVGSGSRAPGEEKSRGSA*SRRTPG
Trigger: CCCCGGTGTACGCCGAGACCAAGCACTTCCTCTACT...CTTTTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAATTCCCAGGCCAGTGCAGGAACTTaGCCAGGATCTCCTCACGCA +
Preference number: 4 (lower is better)
Translates to: CRVLACVQGTPLVTPNSQASAGT*PGSPHA
Trigger: TGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGC...CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAAGAGGTCCGGGCATAGCTaGAGTAGTCGCTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: GMDYSYVGSGSRAPGEEKRSGHS*SSRSAP
Trigger: AGGTGCAGAGCGACTACTCCAGCTATGCCCGGACCT...CTTTTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGCTGGCTGTGGGCGGGTaGCCATCAGTCCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLLAVGG*PSVQDG
Trigger: ACCATCCTGGACTGATGGCCACCCGCCCACAGCCAG...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAGCGAGGGGTGAACAATaGCGAATCTGGGGATGGACT +
Preference number: 4 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEEARGEQ*RIWGWT
Trigger: AGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGC...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCTCTGTTCACTGCTCTaGCCTCGGCGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: TMANLGMDYSYVGSGSRALCSLL*PRRLET
Trigger: GGTTTCCAGGCGCCGAGGCCAGAGCAGTGAACAGAG...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp CAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGCCACTTCTTGGTGTTCCTaGGGAAGCGGCGTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: QPQDPKEFATHVPPSLEATSWCS*GSGVRC
Trigger: ACAACGAACGCCGCTTCCTCAGGAACACCAAGAAGT...GGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp CGGAACACAGCCAACCCGGGCCAAGATGACCGCCCTCCTCGTGAGTCTCCACATCATAAAAGAAAGACCTaGGCAGCTCGACGACGTACA +
Preference number: 4 (lower is better)
Translates to: RNTANPGQDDRPPRESPHHKRKT*AARRRT
Trigger: TGTACGTCGTCGAGCTGCTCAGGTCTTTCTTTTATG...ATGTGGAGACTCACGAGGAGGGCGGTCATCTTGGCCCGGGTTGGCTGTGTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp GGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAAGCCGTCACATCCACCTTaGCAAAGTACAGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: GMDYSYVGSGSRAPGEEKPSHPP*QSTAQA
Trigger: CGCCTGAGCTGTACTTTGTCAAGGTGGATGTGACGG...CTTTTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR TCA 90 bp CGTGAAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGTGCAGCACACATGCGTaGAACCTGTACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RETCTPAAGGSCRCWCTPCSTHA*NLYACS
Trigger: GCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCA...CGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCGGAGTGGCACGTAGGTaGCACGGTGTCGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: EAVSEMTRRKNVGFFQTCGVARR*HGVESA
Trigger: AGCTGACTCGACACCGTGTCACCTACGTGCCACTCC...GCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGAAAGAGCGCGCAGCGTaGCAGCAGGTGAACCAGCAC +
Preference number: 4 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLKERAA*QQVNQH
Trigger: GTGCTGGTTCACCTGCTGGCACGCTGCGCGCTCTTT...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GAGGATCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCAAGGAGGGCCGCAGCTaGTCCTTGTCGCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: EDLVDVGAHRLEAVHLQIKEGRS*SLSPEE
Trigger: CTCCTCAGGCGACAAGGAGCAGCTGCGGCCCTCCTT...GATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CAAAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCAGCGAGAGCTTGGCATaGTTCCCCAGGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: QRRAGRGVNNGESGDGLFSESLA*FPREMN
Trigger: GTTCATCTCCCTGGGGAAGCATGCCAAGCTCTCGCT...GAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CAGGCTGTGACACTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTTTCCACGTCAGCTCCTaGAGCGAGAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: QAVTLQPQDPKEFATHVPFHVSS*SESLAC
Trigger: GCATGCCAAGCTCTCGCTGCAGGAGCTGACGTGGAA...AGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTGAGCACGCTGAACAGTaGCTTCACCCTCGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TMANLGMDYSYVGSGSRAEHAEQ*LHPRGE
Trigger: CTCACCTCGAGGGTGAAGGCACTGTTCAGCGTGCTC...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GGAAGTTCACCACTGTCTTCCGCAAGTTCACCACGCAGCCATACTCAGGGACACAGTAGAGGAAGTGCTTaGTCTCGGCGTACACCGGGG +
Preference number: 4 (lower is better)
Translates to: GSSPLSSASSPRSHTQGHSRGSA*SRRTPG
Trigger: CCCCGGTGTACGCCGAGACCAAGCACTTCCTCTACT...GTGTCCCTGAGTATGGCTGCGTGGTGAACTTGCGGAAGACAGTGGTGAACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp GATGGAGGTCCGGGCATAGCTGAGGAAGGTTTTCGCGTGGGTGAGGTGAGGTGTACGCAGTACGTGTTCTaGGGTTTGATGATGCTGGCG +
Preference number: 4 (lower is better)
Translates to: DGGPGIAEEGFRVGEVRCTQYVF*GLMMLA
Trigger: CGCCAGCATCATCAAACCCCAGAACACGTACTGCGT...ACACCTCACCTCACCCACGCGAAAACCTTCCTCAGCTATGCCCGGACCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR CCA 90 bp CTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAAGCAGCGTGGAGAGGATaGAGCCCTGCGGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: LVDVGAHRLEAVHLQIQKAAWRG*SPAGSP
Trigger: AGGGGATCCCGCAGGGCTCCATCCTCTCCACGCTGC...TTTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCAGCAGGAATGCTTGGTaGCACAGCCACTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: EAVSEMTRRKNVGFFQTCSRNAW*HSHCTA
Trigger: GGCCGTGCAGTGGCTGTGCCACCAAGCATTCCTGCT...GCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp AGCTCCCGCAGCTGCACCCTCTTCAAGTGCTGTCTGATTCCAATGCTTTGCAACAGCAGGAATGCTTGGTaGCACAGCCACTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: SSRSCTLFKCCLIPMLCNSRNAW*HSHCTA
Trigger: GGCCGTGCAGTGGCTGTGCCACCAAGCATTCCTGCT...GTTGCAAAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
3UTR CAA 72 bp ACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTaGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: TPKSLRRMFLPA*KPRLKVRLALM
Trigger: CATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp CGTGACATAAAAGAAAGACCTGAGCAGCTCGACGACGTACACACTCATCAGCCAGGCGGGTCTGGCAGGTaGCACCACACAGAAACCACG +
Preference number: 4 (lower is better)
Translates to: RDIKERPEQLDDVHTHQPGGSGR*HHTETT
Trigger: CGTGGTTTCTGTGTGGTGTCACCTGCCAGACCCGCC...TGGCTGATGAGTGTGTACGTCGTCGAGCTGCTCAGGTCTTTCTTTTATGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp CGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGCCGCGGAAGAGCCTGTTCTTTTaGAACGTGGTCTCCGTGACA +
Preference number: 4 (lower is better)
Translates to: RKTPKSLRRMFLPALKPRKSLFF*NVVSVT
Trigger: TGTCACGGAGACCACGTTTCAAAAGAACAGGCTCTT...CCGCGGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GAGGATCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCCTTCACCCTCGAGGTaGGACGCTCGGCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: EDLVDVGAHRLEAVHLQIPSPSR*DARPSF
Trigger: AAAAGAGGGCCGAGCGTCTCACCTCGAGGGTGAAGG...GATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp ATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGCCTGCAGCAGGAGAGGTTTTCGCGTGGGTaGGGTGAGGTGTCACCAACA +
Preference number: 4 (lower is better)
Translates to: MKWELQHTCVKPVRLQQERFSRG*GEVSPT
Trigger: TGTTGGTGACACCTCACCTCACCCACGCGAAAACCT...CTCCTGCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp ACGTCGCTAGATGCCATGGAGGCCAGCACAGGTAAAGCTGGGGTTTACCAGCAAAGGCCGTGTCAGAGATaGCGCGCAGGAAAAATGTGG +
Preference number: 4 (lower is better)
Translates to: TSLDAMEASTGKAGVYQQRPCQR*RAGKMW
Trigger: CCACATTTTTCCTGCGCGTCATCTCTGACACGGCCT...TTGCTGGTAAACCCCAGCTTTACCTGTGCTGGCCTCCATGGCATCTAGCGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp GTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCATAGCTGAGGAAGGTTTTAGTCCAGGATGGTCTTaGAGTCTGAGGGCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: VEGETGSDGGPGIAEEGFSPGWS*SLRAVP
Trigger: CGGCACTGCCCTCAGACTTCAAGACCATCCTGGACT...AAAACCTTCCTCAGCTATGCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR GCA 90 bp TCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAACGAAGCCGTACACCTaGCAGGGGCTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SCRCWCTPSGGCSPANPETKPYT*QGLLCW
Trigger: CCAGCACAGCAGCCCCTGGCAGGTGTACGGCTTCGT...TTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp ATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGCCTGCAGCAGGAGAGCGAGAGCTTGGCATaGTTCCCCAGGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: MKWELQHTCVKPVRLQQESESLA*FPREMN
Trigger: GTTCATCTCCCTGGGGAAGCATGCCAAGCTCTCGCT...CTCCTGCTGCAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GACAGCTCCCGCAGCTGCACCCTCTTCAAGTGCTGTCTGATTCCAATGCTTTGCAGCGAGAGCTTGGCATaGTTCCCCAGGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: DSSRSCTLFKCCLIPMLCSESLA*FPREMN
Trigger: GTTCATCTCCCTGGGGAAGCATGCCAAGCTCTCGCT...GCAAAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp TCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGACGCAGACGGTGCTCTaGGGCCGGAACACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SKLADEMGAAAHMRETCTTQTVL*GRNTAN
Trigger: GTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGT...CGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAAAAGACACTCATCAGCCAGTaGAGGAACTTGGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: GMDYSYVGSGSRAPGEEKTLISQ*RNLARI
Trigger: GATCCTGGCCAAGTTCCTGCACTGGCTGATGAGTGT...CTTTTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCACAATGCTTTGCAACTTaGTCCAGACACTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPQCFAT*SRHSSG
Trigger: ACCGGAAGAGTGTCTGGAGCAAGTTGCAAAGCATTG...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp TGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTCCAATGCTTTGCAACTTaGTCCAGACACTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: WGSEDGRCAGHSALGWTLQCFAT*SRHSSG
Trigger: ACCGGAAGAGTGTCTGGAGCAAGTTGCAAAGCATTG...GAGTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR GCA 90 bp TGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGATGCTGCCTGACCTCTaGTTCCGACAGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: CGVLPNLLMKWELQHTCVMLPDL*FRQLPQ
Trigger: CTGCGGGAGCTGTCGGAAGCAGAGGTCAGGCAGCAT...CACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CAAAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCAGACCCCAAAGAGTTTaGGACGCATGTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QRRAGRGVNNGESGDGLFRPQRV*DACSSQ
Trigger: CTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCT...GAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTCTTCTTCGGCGGGTCTaGCAGGTGACACCACACAGA +
Preference number: 4 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTLLRRV*QVTPHR
Trigger: TCTGTGTGGTGTCACCTGCCAGACCCGCCGAAGAAG...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGTCTGGCCAGTGCAGGAACTTaGCCAGGATCTCCTCACGCA +
Preference number: 4 (lower is better)
Translates to: KPVRLQQEDLVDVGAHRLASAGT*PGSPHA
Trigger: TGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGC...CAGACGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp AGCTCCCGCAGCTGCACCCTCTTCAAGTGCTGTCTGATTCCAATGCTTTGCAACCTCTGCGGAACGTTCTaGCTCCCACGACGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSRSCTLFKCCLIPMLCNLCGTF*LPRRSP
Trigger: TGGACTACGTCGTGGGAGCCAGAACGTTCCGCAGAG...GTTGCAAAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp TGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAATTCCCAGTGTCGCATGTACGGCTaGAGGTCTGTCAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: CRVLACVQGTPLVTPNSQCRMYG*RSVKVE
Trigger: CTCTACCTTGACAGACCTCCAGCCGTACATGCGACA...CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp TGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCAAATTCCCAGTTGGTGCACACCGTCTaGAGGCTGTTCACCTGCAAA +
Preference number: 4 (lower is better)
Translates to: CRVLACVQGTPLVTPNSQLVHTV*RLFTCK
Trigger: TTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAA...CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCCTATGGGATCTTGTAGATGTTaGTGCACACCGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EGRARGEQWRIWGWTIPMGSCRC*CTPSGG
Trigger: GCCTCCAGACGGTGTGCACCAACATCTACAAGATCC...CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAACGACTCAGCTGCGTCTaGGCTGTCCTGAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: LVDVGAHRLEAVHLQIQKRLSCV*AVLSDP
Trigger: GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCG...TTTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAACTGGTGAGGAAAAGCTaGCCCTGGGGTGGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LVDVGAHRLEAVHLQIQKLVRKS*PWGGAE
Trigger: CTCGGCTCCACCCCAGGGCCAGCTTTTCCTCACCAG...TTTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGTCTGACTGGACGTAGGACGTaGCTCTTGAAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: KPVRLQQEDLVDVGAHRLTGRRT*LLKALR
Trigger: CCGCAAGGCCTTCAAGAGCCACGTCCTACGTCCAGT...CAGACGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR TCA 90 bp TCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGCTTCCCGATGCTGCCTaGCCTCTGCTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: SKLADEMGAAAHMRETCTLPDAA*PLLPTA
Trigger: AGCTGTCGGAAGCAGAGGTCAGGCAGCATCGGGAAG...CGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GGCATAGCTGAGGAAGGTTTTCGCGTGGGTGAGGTGAGGTGTCACCAACAAGAATCCAGAAACAGGCTGTaGCACTTCAGCCGCAAGACC +
Preference number: 4 (lower is better)
Translates to: GIAEEGFRVGEVRCHQQESRNRL*HFSRKT
Trigger: GGTCTTGCGGCTGAAGTGTCACAGCCTGTTTCTGGA...TTCTTGTTGGTGACACCTCACCTCACCCACGCGAAAACCTTCCTCAGCTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR TCA 90 bp GACAGCTCCCGCAGCTGCACCCTCTTCAAGTGCTGTCTGATTCCAATGCTTTGCCAACCCAAGAGGTGGTaGGAAACAAGGGAACGAGGA +
Preference number: 4 (lower is better)
Translates to: DSSRSCTLFKCCLIPMLCQPKRW*ETRERG
Trigger: TCCTCGTTCCCTTGTTTCTCACCACCTCTTGGGTTG...GCAAAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTGAGCTGCAGCACACATaGGTGAAACCTGTACGCCTG +
Preference number: 4 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTELQHT*VKPVRL
Trigger: CAGGCGTACAGGTTTCACGCATGTGTGCTGCAGCTC...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GGCATAGCTGAGGAAGGTTTTCGCGTGGGTGAGGTGAGGTGTCACCAACAAGAACCCCAGCGACATCCCTaGGTTCTTGGCTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GIAEEGFRVGEVRCHQQEPQRHP*VLGFQD
Trigger: ATCCTGAAAGCCAAGAACGCAGGGATGTCGCTGGGG...TTCTTGTTGGTGACACCTCACCTCACCCACGCGAAAACCTTCCTCAGCTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR GCA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTCCCCAGCGACATCCCTaGGTTCTTGGCTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTPQRHP*VLGFQD
Trigger: ATCCTGAAAGCCAAGAACGCAGGGATGTCGCTGGGG...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GAGGATCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCTTCTTCGGCGGGTCTaGCAGGTGACACCACACAGA +
Preference number: 4 (lower is better)
Translates to: EDLVDVGAHRLEAVHLQILLRRV*QVTPHR
Trigger: TCTGTGTGGTGTCACCTGCCAGACCCGCCGAAGAAG...GATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp TCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGCACCCTCCAAAGAGGTaGCTTCTTCGGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SKLADEMGAAAHMRETCTHPPKR*LLRRVW
Trigger: CCAGACCCGCCGAAGAAGCCACCTCTTTGGAGGGTG...CGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp TCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAACACCCTCCAAAGAGGTaGCTTCTTCGGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SCRCWCTPSGGCSPANPEHPPKR*LLRRVW
Trigger: CCAGACCCGCCGAAGAAGCCACCTCTTTGGAGGGTG...TTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCATAGCTGAGGAAGGTTTTCTGGCATCCAGGGCCTaGAACCCAGAAAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: VEGETGSDGGPGIAEEGFLASRA*NPERWS
Trigger: AGACCATCTTTCTGGGTTCCAGGCCCTGGATGCCAG...AAAACCTTCCTCAGCTATGCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR CCA 90 bp GCGTGTCCATCAAAACGTGAAGGTGAACCTCGTAAGTTTATGCAAACTGGACAGACAGACACCGGCTGCTaGGGTGACCGCAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: ACPSKREGEPRKFMQTGQTDTGC*GDRSSQ
Trigger: CTGCGAGCTGCGGTCACCCCAGCAGCCGGTGTCTGT...CTGTCCAGTTTGCATAAACTTACGAGGTTCACCTTCACGTTTTGATGGACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp AGCTCCCGCAGCTGCACCCTCTTCAAGTGCTGTCTGATTCCAATGCTTTGCAACGTCAAGGTAGAGACGTaGCTCTTGAAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SSRSCTLFKCCLIPMLCNVKVET*LLKALR
Trigger: CCGCAAGGCCTTCAAGAGCCACGTCTCTACCTTGAC...GTTGCAAAGCATTGGAATCAGACAGCACTTGAAGAGGGTGCAGCTGCGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp TGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAGGTCCGGGCATAGCTaGAGTAGTCGCTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: CGVLPNLLMKWELQHTCVRSGHS*SSRSAP
Trigger: AGGTGCAGAGCGACTACTCCAGCTATGCCCGGACCT...CACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGGATCTTGTAGATGTTaGTGCACACCGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LQPQDPKEFATHVPPSLEGSCRC*CTPSGG
Trigger: GCCTCCAGACGGTGTGCACCAACATCTACAAGATCC...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp GTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCATAGCTGAGGAAGGTTTTTTGAGCAGGAATGCTTaGTGGCACAGCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: VEGETGSDGGPGIAEEGFLSRNA*WHSHCT
Trigger: CGTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAA...AAAACCTTCCTCAGCTATGCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR CCA 90 bp CGTGACATAAAAGAAAGACCTGAGCAGCTCGACGACGTACACACTCATCAGCCATGGACACTCAGCCCTTaGCTGGACACTCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RDIKERPEQLDDVHTHQPWTLSP*LDTRSG
Trigger: GCCTGAGCGAGTGTCCAGCCAAGGGCTGAGTGTCCA...TGGCTGATGAGTGTGTACGTCGTCGAGCTGCTCAGGTCTTTCTTTTATGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp TGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACTCGAACAATGGCGAATCTaGGGATGGACTATTCCTATG +
Preference number: 4 (lower is better)
Translates to: WGSEDGRCAGHSALGWTLEQWRI*GWTIPM
Trigger: CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTC...GAGTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp GAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCCTATGCATGCAACAGGCAAGTaGAGAATCAGAGTGCACCAG +
Preference number: 4 (lower is better)
Translates to: EGRARGEQWRIWGWTIPMHATGK*RIRVHQ
Trigger: CTGGTGCACTCTGATTCTCCACTTGCCTGTTGCATG...CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGACTTCTTGGTGTTCCTaGGGAAGCGGCGTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLTSWCS*GSGVRC
Trigger: ACAACGAACGCCGCTTCCTCAGGAACACCAAGAAGT...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp TCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGGGTGTCGAGTCAGCTTaGGCAGGAATGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SKLADEMGAAAHMRETCTGVESA*AGMLGG
Trigger: GCCACCAAGCATTCCTGCTCAAGCTGACTCGACACC...CGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GCGTGTCCATCAAAACGTGAAGGTGAACCTCGTAAGTTTATGCAAACTGGACAGCAGCCTGTGGGGAAGTaGAGACGGCAGGTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ACPSKREGEPRKFMQTGQQPVGK*RRQVCW
Trigger: CCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTG...CTGTCCAGTTTGCATAAACTTACGAGGTTCACCTTCACGTTTTGATGGACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTACACTCATCAGCCAGTaGAGGAACTTGGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTTLISQ*RNLARI
Trigger: GATCCTGGCCAAGTTCCTGCACTGGCTGATGAGTGT...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CATCCCTGCGTTCTTGGCTTTCAGGATGGAGTAGCAGAGGGAGGCCGTGTCAGAAAGGGAACGAGGACATaGAACAGGCAAGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: HPCVLGFQDGVAEGGRVRKGTRT*NRQVEN
Trigger: ATTCTCCACTTGCCTGTTGCATGTCCTCGTTCCCTT...TCTGACACGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGAACGCAGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp GCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCAGCCTCCCTGACGCTATaGTTCCAGGCCCGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: AGKMWGSSKLADEMGAAAASLTL*FQARSH
Trigger: ATGCGAACGGGCCTGGAACCATAGCGTCAGGGAGGC...TGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp AAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGTCTGTGTCGCATGTACGGCTaGAGGTCTGTCAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: KPVRLQQEDLVDVGAHRLCRMYG*RSVKVE
Trigger: CTCTACCTTGACAGACCTCCAGCCGTACATGCGACA...CAGACGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp TCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGCTGCTCCTTGTCGCCTaGGGAGTAGAGGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: SKLADEMGAAAHMRETCTLLLVA*GVEEVL
Trigger: AAGCACTTCCTCTACTCCTCAGGCGACAAGGAGCAG...CGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAACAATGCTTTGCAACTTaGTCCAGACACTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: LQPQDPKEFATHVPPSLEQCFAT*SRHSSG
Trigger: ACCGGAAGAGTGTCTGGAGCAAGTTGCAAAGCATTG...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCAGAGCACGCTGAACAGTaGCTTCACCCTCGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: AGKMWGSSKLADEMGAAAEHAEQ*LHPRGE
Trigger: CTCACCTCGAGGGTGAAGGCACTGTTCAGCGTGCTC...TGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTCTTGTAGATGTTGGTaGACACCGTCTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: EAVSEMTRRKNVGFFQTCSCRCW*TPSGGC
Trigger: ACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA...GCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp GCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCAAGCTTCCGACTCAGCTaGGTCTGGGCTGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: AGKMWGSSKLADEMGAAASFRLS*VWAVLS
Trigger: ACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCT...TGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CAGGCTGTGACACTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCACATCTTCATCTGTaGATCATAAGCAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QAVTLQPQDPKEFATHVPPHLHL*IISRGP
Trigger: GGGACCTCTGCTTATGATGCACAGATGAAGATGTGG...AGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp GCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCAAGTAGAGGAAGTGCTTaGTCTCGGCGTACACCGGGG +
Preference number: 4 (lower is better)
Translates to: AGKMWGSSKLADEMGAAASRGSA*SRRTPG
Trigger: CCCCGGTGTACGCCGAGACCAAGCACTTCCTCTACT...TGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp TCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGTGGAACCCAGAAAGATaGTCTCCACGAGCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SKLADEMGAAAHMRETCTWNPER*SPRASE
Trigger: CTCGGAGGCTCGTGGAGACCATCTTTCTGGGTTCCA...CGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CCA 90 bp CGTGACATAAAAGAAAGACCTGAGCAGCTCGACGACGTACACACTCATCAGCCACTGGCATCCAGGGCCTaGAACCCAGAAAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: RDIKERPEQLDDVHTHQPLASRA*NPERWS
Trigger: AGACCATCTTTCTGGGTTCCAGGCCCTGGATGCCAG...TGGCTGATGAGTGTGTACGTCGTCGAGCTGCTCAGGTCTTTCTTTTATGTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp TCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAATCTTGGCTTTCAGGATaGAGTAGCAGAGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SCRCWCTPSGGCSPANPESWLSG*SSRGRP
Trigger: CGGCCTCCCTCTGCTACTCCATCCTGAAAGCCAAGA...TTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR TCA 90 bp GCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCAAAAGCAAATGCCCAGTaGCCAGGAGGCAACGAGAGG +
Preference number: 4 (lower is better)
Translates to: AGKMWGSSKLADEMGAAAKANAQ*PGGNER
Trigger: CCTCTCGTTGCCTCCTGGTCACTGGGCATTTGCTTT...TGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp CTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAAGGAATGAGAACTGCTTaGACCGAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LVDVGAHRLEAVHLQIQKGMRTA*TEEAEV
Trigger: AACCTCTGCCTCCTCGGTTCAAGCAGTTCTCATTCC...TTTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp TCCAAACTTGCTGATGAAATGGGAGCTGCAGCACACATGCGTGAAACCTGTACGAGACCCCAAAGAGTTTaGGACGCATGTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SKLADEMGAAAHMRETCTRPQRV*DACSSQ
Trigger: CTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCT...CGTACAGGTTTCACGCATGTGTGCTGCAGCTCCCATTTCATCAGCAAGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR GCA 90 bp CGTGACATAAAAGAAAGACCTGAGCAGCTCGACGACGTACACACTCATCAGCCAAGACCCCAAAGAGTTTaGGACGCATGTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RDIKERPEQLDDVHTHQPRPQRV*DACSSQ
Trigger: CTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCT...TGGCTGATGAGTGTGTACGTCGTCGAGCTGCTCAGGTCTTTCTTTTATGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR GCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTAACCTCGTAAGTTTATaGAAACTGGACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TMANLGMDYSYVGSGSRANLVSL*KLDRRE
Trigger: CTCCCTCCTGTCCAGTTTGCATAAACTTACGAGGTT...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CCA 90 bp ACAATGGCGAATCTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTGAACAATGGCGAATCTaGGGATGGACTATTCCTATG +
Preference number: 4 (lower is better)
Translates to: TMANLGMDYSYVGSGSRAEQWRI*GWTIPM
Trigger: CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTC...AGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAGATTCGCCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CCA 90 bp CGTGACATAAAAGAAAGACCTGAGCAGCTCGACGACGTACACACTCATCAGCCATGGCGAATCTGGGGATaGACTATTCCTATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RDIKERPEQLDDVHTHQPWRIWG*TIPMWG
Trigger: TCCCCACATAGGAATAGTCCATCCCCAGATTCGCCA...TGGCTGATGAGTGTGTACGTCGTCGAGCTGCTCAGGTCTTTCTTTTATGTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR TCA 90 bp TCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCAGAAGCCTGGCCAACATGGTaGAAGCCTATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SCRCWCTPSGGCSPANPEAWPTW*KPISTK
Trigger: TTTAGTAGAGATAGGCTTTCACCATGTTGGCCAGGC...TTCTGGATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS GCA 90 bp GGCGCCGCACGAACGTGGCCAGCGGCAGCACCTCGCGGTAGTGGCTaGGCAGCAGGGAGCGCACGGCTCGGCAGCGGGGAGCGCGCGGCA +
Preference number: 5 (lower is better)
Translates to: GAARTWPAAAPRGSG*AAGSARLGSGERAA
Trigger: TGCCGCGCGCTCCCCGCTGCCGAGCCGTGCGCTCCCTGCTGCGCAGCCACTACCGCGAGGTGCTGCCGCTGGCCACGTTCGTGCGGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS TCA 90 bp CCCAGACGCCTTCGGGGTCCACTAGCGTGTGGCGGGGGCCGGGCCTaGGTGGCAGCGCCGAGCTGGTACAGCGGCGGCCCGCACACCTGG +
Preference number: 5 (lower is better)
Translates to: PRRLRGPLACGGGRA*VAAPSWYSGGPHTW
Trigger: CCAGGTGTGCGGGCCGCCGCTGTACCAGCTCGGCGCTGCCACTCAGGCCCGGCCCCCGCCACACGCTAGTGGACCCCGAAGGCGTCTGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGCGACCCACGCCTGGGCCTCTaGGGCAACGGCAGACTTCGG +
Preference number: 5 (lower is better)
Translates to: HCTASEGRGPAAPLAPSDPRLGL*GNGRLR
Trigger: CCGAAGTCTGCCGTTGCCCAAGAGGCCCAGGCGTGG...GTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS GCA 90 bp GGCCGCCACAGAGCCCTGGGGCTTCTCCCGGGCACAGACACCGGCTaGTGGGGTGACCGCAGCTCGCAGCGGGCAGTGCGTCTTGAGGAG +
Preference number: 5 (lower is better)
Translates to: GRHRALGLLPGTDTG*WGDRSSQRAVRLEE
Trigger: CTCCTCAAGACGCACTGCCCGCTGCGAGCTGCGGTCACCCCAGCAGCCGGTGTCTGTGCCCGGGAGAAGCCCCAGGGCTCTGTGGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS GCA 90 bp CGCAGGCAGGCCCGCACGAAGCCGTACACCTGCCAGGGGCTGCTGTaGTGGCGGAGCAGCTGCACCAGGCGACGGGGGTCTGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RRQARTKPYTCQGLL*WRSSCTRRRGSVSS
Trigger: GGAGGACACAGACCCCCGTCGCCTGGTGCAGCTGCTCCGCCAGCACAGCAGCCCCTGGCAGGTGTACGGCTTCGTGCGGGCCTGCCTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCCCTCCCTCTGGCTCTTGAAGGCCTaGCGGACGTGCCCATGGGCG +
Preference number: 5 (lower is better)
Translates to: LRPQTPSGAGLGVGRPSLWLLKA*RTCPWA
Trigger: CGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCA...GAGGGAGGGGCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp CACAGCCACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCGCCTTGAAGCCGCGGTaGAAGGTGAGACTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: HSHCTASEGRGPAAPLAPALKPR*KVRLAL
Trigger: CAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGC...GGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTGGCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCGAGGGCAGTGCCGGGTaGGCTGCGGCCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RSGLSRTLSLQPDMQASAEGSAG*AAASRA
Trigger: TGCCCTGGAGGCCGCAGCCAACCCGGCACTGCCCTC...GGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS TCA 90 bp CAGCTGGGAGCCACCAGCACAAAGAGCGCGCAGCGTGCCAGCAGGTaGACCAGCACGTCGTCGCCCACGCGGCGCAGCAGCAGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: QLGATSTKSAQRASR*TSTSSPTRRSSSPH
Trigger: GTGGGGGCTGCTGCTGCGCCGCGTGGGCGACGACGTGCTGGTTCACCTGCTGGCACGCTGCGCGCTCTTTGTGCTGGTGGCTCCCAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS GCA 90 bp CCCACACGGAAGCAGAGGTGGACGCAACGGCCCTGCAGCAGCACCTaGCCCAGCCGGGCACAGGCTCCACTTCCGGCCAGGTGCGCTCAC +
Preference number: 5 (lower is better)
Translates to: PTRKQRWTQRPCSST*PSRAQAPLPARCAH
Trigger: GTGAGCGCACCTGGCCGGAAGTGGAGCCTGTGCCCGGCTGGGGCAGGTGCTGCTGCAGGGCCGTTGCGTCCACCTCTGCTTCCGTGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503656.1
CDS GCA 90 bp CTGGTAGGCGCAGCTGGGAGCCACCAGCACAAAGAGCGCGCAGCGTaGCAGCAGGTGAACCAGCACGTCGTCGCCCACGCGGCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LVGAAGSHQHKERAA*QQVNQHVVAHAAQQ
Trigger: CTGCTGCGCCGCGTGGGCGACGACGTGCTGGTTCACCTGCTGGCACGCTGCGCGCTCTTTGTGCTGGTGGCTCCCAGCTGCGCCTACCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS GCA 90 bp TGGGGCCTGGGCCCTCGACGGCCACCACCTCCTCACCTGGGCTCCTaGGCAGCCAAGCGCAGTCCCGCACGCTCATCTTCCACGTCAGCT +
Preference number: 5 (lower is better)
Translates to: WGLGPRRPPPPHLGS*AAKRSPARSSSTSA
Trigger: AGCTGACGTGGAAGATGAGCGTGCGGGACTGCGCTTGGCTGCGCAGGAGCCCAGGTGAGGAGGTGGTGGCCGTCGAGGGCCCAGGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGAGGGCAGTGCCGGGTaGGCTGCGGCCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCEGSAG*AAASRA
Trigger: TGCCCTGGAGGCCGCAGCCAACCCGGCACTGCCCTC...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS GCA 90 bp AAGCCGAAGGCCAGCACGTTCTTCGCGCCGCGCTCGCACAGCCTCTaGAGCACTCGGGCCACCAGCTCCTTCAGGCAGGACACCTGGCGG +
Preference number: 5 (lower is better)
Translates to: KPKASTFFAPRSHSL*STRATSSFRQDTWR
Trigger: CCGCCAGGTGTCCTGCCTGAAGGAGCTGGTGGCCCGAGTGCTGCAGAGGCTGTGCGAGCGCGGCGCGAAGAACGTGCTGGCCTTCGGCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CGCTCAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAGGAAGCGGCGTTCGTaGTGCCTGGAGCCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RSGLSRTLSLQPDMQASARKRRS*CLEPQR
Trigger: CCTCTGGGGCTCCAGGCACAACGAACGCCGCTTCCT...GGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp CACTGCACGGCCTCGGAGGGCAGAGGGCCGGCGGCGCCCTTGGCCCCCAGCGACCCAATGCTTTGCAACTaGCTCCAGACACTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: HCTASEGRGPAAPLAPSDPMLCN*LQTLFR
Trigger: CCGGAAGAGTGTCTGGAGCAAGTTGCAAAGCATTGG...GTCGCTGGGGGCCAAGGGCGCCGCCGGCCCTCTGCCCTCCGAGGCCGTGCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS GCA 90 bp GAGGGGCACCCTGTGGCCTCTGACCCTTTGGGATTGGCAGTCGCCTaGCCCACACGGAAGCAGAGGTGGACGCAACGGCCCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: EGHPVASDPLGLAVA*PTRKQRWTQRPCSS
Trigger: GCTGCTGCAGGGCCGTTGCGTCCACCTCTGCTTCCGTGTGGGGCAGGCGACTGCCAATCCCAAAGGGTCAGAGGCCACAGGGTGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503656.1
CDS-3UTR CAA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCCGCAGCCCGTCAGGCTaGGGGATGAAGCGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRRSPSG*GMKRSL
Trigger: CAGACTCCGCTTCATCCCCAAGCCTGACGGGCTGCG...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAGCTGGTAGAGACGTGGCTCTaGAAGGCCTTGCGGACGTGC +
Preference number: 5 (lower is better)
Translates to: GCGLQGSQRRPRELPTQLVETWL*KALRTC
Trigger: GCACGTCCGCAAGGCCTTCAAGAGCCACGTCTCTAC...CAGCTGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp CCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTCTCGGCAGACACTTCTCCCCATaGCCGGCAACCCGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: PPWDVEPGVTGLLVSALGRHFSP*PATRLH
Trigger: GTGGAGCCGGGTTGCCGGCAATGGGGAGAAGTGTCT...GCCGAGAGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS GCA 90 bp CCAGTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTaGGGCCGGAACACAGCCAACCCCTGGGCTCCTGCGCAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: PVQELGQDLLTQTVL*GRNTANPWAPAQPS
Trigger: GCTTGGCTGCGCAGGAGCCCAGGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
CDS GCA 90 bp CCTGGCACTGGACGTAGGACGTGGCTCTTGAAGGCCTTGCGGACGTaGCCATGGGCGGCCTTCTGGACCACGGCATACCGACGCACGCAG +
Preference number: 5 (lower is better)
Translates to: PGTGRRTWLLKALRT*PWAAFWTTAYRRTQ
Trigger: CTGCGTGCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGTCCTACGTCCAGTGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000484238.6
CDS-3UTR CAA 90 bp AGGCCTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGAAACAGGGGCCGCATTaGCCAGTAGCGCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: RPRPNTHSGLRLPAVRAWKQGPH*PVALGQ
Trigger: CTGCCCCAGCGCTACTGGCAAATGCGGCCCCTGTTT...CCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS TCA 90 bp TCTCCACGAGCCTCCGAGCGCCAGTCAGGCTGGGCCTCAGAGAGCTaGGTAGGAAGGAGGGCCGCAGCTGCTCCTTGTCGCCTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: SPRASERQSGWASES*VGRRAAAAPCRLRS
Trigger: ACTCCTCAGGCGACAAGGAGCAGCTGCGGCCCTCCTTCCTACTCAGCTCTCTGAGGCCCAGCCTGACTGGCGCTCGGAGGCTCGTGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS GCA 90 bp ATCAGCCAGTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTaGTCTGCGGCCGGAACACAGCCAACCCCTGGGCTCCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: ISQCRNLARISSRRR*SAAGTQPTPGLLRS
Trigger: GCTGCGCAGGAGCCCAGGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
CDS-3UTR CAA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTAGGAAGCGGCGTTCGTaGTGCCTGGAGCCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTRKRRS*CLEPQR
Trigger: CCTCTGGGGCTCCAGGCACAACGAACGCCGCTTCCT...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCGCAGCCCGTCAGGCTaGGGGATGAAGCGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTRSPSG*GMKRSL
Trigger: CAGACTCCGCTTCATCCCCAAGCCTGACGGGCTGCG...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCATGGCTCTTGAAGGCCTaGCGGACGTGCCCATGGGCG +
Preference number: 5 (lower is better)
Translates to: EPSASLWGSEDGRCAGHSWLLKA*RTCPWA
Trigger: CGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCA...TGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp AAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTGGGCCGCGCCTTGAAGCCGCGGTaGAAGGTGAGACTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: KHSLRPQTPSGAGLGVGRALKPR*KVRLAL
Trigger: CAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGC...GCGGCCCACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp CGCACACGCAGCACGAAGGTGCGCCAGGCCCTGTGGATATCGTCCAGGCCCAGCGCCTTGAAGCCGCGGTaGAAGGTGAGACTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RTRSTKVRQALWISSRPSALKPR*KVRLAL
Trigger: CAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGC...GCTGGGCCTGGACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACCTGGACACTCAGCCCTaGGCTGGACACTCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNLDTQP*AGHSLR
Trigger: CCTGAGCGAGTGTCCAGCCAAGGGCTGAGTGTCCAG...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS TCA 90 bp GAGCGCACCCTCCAAAGAGGTGGCTTCTTCGGCGGGTCTGGCAGGTaGCACCACACAGAAACCACGGTCACTCGGTCCACGCGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: ERTLQRGGFFGGSGR*HHTETTVTRSTRPA
Trigger: GGCAGGACGCGTGGACCGAGTGACCGTGGTTTCTGTGTGGTGTCACCTGCCAGACCCGCCGAAGAAGCCACCTCTTTGGAGGGTGCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCCTGCAGCGAGAGCTaGGCATGCTTCCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWSCSES*ACFPRE
Trigger: CTCCCTGGGGAAGCATGCCAAGCTCTCGCTGCAGGA...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTGCGGCCGGAACCTGGACACTCAGCCCTaGGCTGGACACTCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VQELGQDLLTQTVLCGRNLDTQP*AGHSLR
Trigger: CCTGAGCGAGTGTCCAGCCAAGGGCTGAGTGTCCAG...GTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp GGTTGGCTGCGGCCTCCAGGGCAGTCAGCGTCGTCCCCGGGAGCTTCCGACTCAAGGGAGATGAACTTCTaGGTGTTCCTGAGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: GWLRPPGQSASSPGASDSREMNF*VFLRKR
Trigger: CCGCTTCCTCAGGAACACCAAGAAGTTCATCTCCCT...TGAGTCGGAAGCTCCCGGGGACGACGCTGACTGCCCTGGAGGCCGCAGCCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCAGCCAGTGCAGGAACTaGGCCAGGATCTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: PSLEAAVEGETGSDGGPGSQCRN*ARISSR
Trigger: GCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCT...GCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CCCCTCCCTCCCTGGGACGTAGAGCCCGGCGTGACAGGGCTGCTGGTGTCTGCTTACGTGTTCTGGGGTTaGATGATGCTGGCGATGACC +
Preference number: 5 (lower is better)
Translates to: PLPPWDVEPGVTGLLVSAYVFWG*MMLAMT
Trigger: GGTCATCGCCAGCATCATCAAACCCCAGAACACGTA...AGCAGACACCAGCAGCCCTGTCACGCCGGGCTCTACGTCCCAGGGAGGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp AGGGACCCCCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGGTAGAGACGTGGCTCTaGAAGGCCTTGCGGACGTGC +
Preference number: 5 (lower is better)
Translates to: RDPHPGAGSSPVYRAHLWVETWL*KALRTC
Trigger: GCACGTCCGCAAGGCCTTCAAGAGCCACGTCTCTAC...CCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGGGGGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp CAGGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACATGTTCCTCCCAGCCTaGAAGCCGCGGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QASAGHSAFSRTCRPRPNMFLPA*KPRLKV
Trigger: CACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACAT...GTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GGCCTCAGCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACCTTGAGCAGGAATGCTaGGTGGCACAGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: GLSRTLSLQPDMQASAKHLEQEC*VAQPLH
Trigger: GTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAAG...GTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGCTGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCCTATGCCACGCCTGGGCCTCTaGGGCAACGGCAGACTTCGG +
Preference number: 5 (lower is better)
Translates to: EGRARGEQWRIWGWTIPMPRLGL*GNGRLR
Trigger: CCGAAGTCTGCCGTTGCCCAAGAGGCCCAGGCGTGG...CATAGGAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp CAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAAGCCAGGAAGCGGCGTTCGTaGTGCCTGGAGCCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: QPQDPKEFATHVPPSLEARKRRS*CLEPQR
Trigger: CCTCTGGGGCTCCAGGCACAACGAACGCCGCTTCCT...GGCTTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp AGGCCTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGAGGGAGATGAACTTCTaGGTGTTCCTGAGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: RPRPNTHSGLRLPAVRAWREMNF*VFLRKR
Trigger: CCGCTTCCTCAGGAACACCAAGAAGTTCATCTCCCT...CCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCATAGCTGAGGAAGGTTTTGAGGGCAGTGCCGGGTaGGCTGCGGCCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: VEGETGSDGGPGIAEEGFEGSAG*AAASRA
Trigger: TGCCCTGGAGGCCGCAGCCAACCCGGCACTGCCCTC...AAAACCTTCCTCAGCTATGCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS TCA 90 bp AGGAGGGAGAGCAGAGGCAGAGATCACCGTGTCCACTCGACGTCCTaGGCGAAAAGCCACGTGTGCCCACGTGACGATGGAGACAGGAGG +
Preference number: 5 (lower is better)
Translates to: RRESRGRDHRVHSTS*AKSHVCPRDDGDRR
Trigger: CCTCCTGTCTCCATCGTCACGTGGGCACACGTGGCTTTTCGCTCAGGACGTCGAGTGGACACGGTGATCTCTGCCTCTGCTCTCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp GATGGAGGTCCGGGCATAGCTGAGGAAGGTTTTCGCGTGGGTGAGGTGAGGTGTAAACAGGGGCCGCATTaGCCAGTAGCGCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: DGGPGIAEEGFRVGEVRCKQGPH*PVALGQ
Trigger: CTGCCCCAGCGCTACTGGCAAATGCGGCCCCTGTTT...ACACCTCACCTCACCCACGCGAAAACCTTCCTCAGCTATGCCCGGACCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR CAA 90 bp CTCGGCCAAACACTCACTCAGGCCTCAGACTCCCAGCGGTGCGGGCCTGGGTGTAAGACCCCAAAGAGTTaGCGACGCATGTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: LGQTLTQASDSQRCGPGCKTPKS*RRMFLP
Trigger: TGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTT...ACACCCAGGCCCGCACCGCTGGGAGTCTGAGGCCTGAGTGAGTGTTTGGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS GCA 90 bp CCAGTGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTaGGGCCGGAACACAGCCAACCCCTTAAACGAGAAGGACATGCCA +
Preference number: 5 (lower is better)
Translates to: PVQELGQDLLTQTVL*GRNTANPLNEKDMP
Trigger: TGGCATGTCCTTCTCGTTTAAGGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484238.6
CDS-3UTR CAA 90 bp AAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGTCTGCCACGCCTGGGCCTCTaGGGCAACGGCAGACTTCGG +
Preference number: 5 (lower is better)
Translates to: KPVRLQQEDLVDVGAHRLPRLGL*GNGRLR
Trigger: CCGAAGTCTGCCGTTGCCCAAGAGGCCCAGGCGTGG...CAGACGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp GTCGTCCCCGGGAGCTTCCGACTCAGCTGCGTCTGGGCTGTCCTGAGTGACCCCAAAGAGCCTGTTCTTTaGAAACGTGGTCTCCGTGAC +
Preference number: 5 (lower is better)
Translates to: VVPGSFRLSCVWAVLSDPKEPVL*KRGLRD
Trigger: GTCACGGAGACCACGTTTCAAAAGAACAGGCTCTTT...GGGGTCACTCAGGACAGCCCAGACGCAGCTGAGTCGGAAGCTCCCGGGGACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CGCCAGAGCGTCTGTGCTTCCAGACACTTCTCCCCATTGCCGGCAACCCGGCTCCCAATGCTTTGCAACTaGCTCCAGACACTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: RQSVCASRHFSPLPATRLPMLCN*LQTLFR
Trigger: CCGGAAGAGTGTCTGGAGCAAGTTGCAAAGCATTGG...GAGCCGGGTTGCCGGCAATGGGGAGAAGTGTCTGGAAGCACAGACGCTCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp CGTGAAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGCGCAGCCCGTCAGGCTaGGGGATGAAGCGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: RETCTPAAGGSCRCWCTPRSPSG*GMKRSL
Trigger: CAGACTCCGCTTCATCCCCAAGCCTGACGGGCTGCG...CGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp TGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACATGTTCCTCCCAGCCTaGAAGCCGCGGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: CGEVKTAGVLDTQPLAGHMFLPA*KPRLKV
Trigger: CACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACAT...GTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCACGGTGTCGAGTCAGCTaGAGCAGGAATGCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPRCRVS*SRNAWW
Trigger: CCACCAAGCATTCCTGCTCAAGCTGACTCGACACCG...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS GCA 90 bp CGCACGCTCATCTTCCACGTCAGCTCCTGCAGCGAGAGCTTGGCATaGTTCCCCAGGGAGATGAACTTCTTGGTGTTCCTGAGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: RTLIFHVSSCSESLA*FPREMNFLVFLRKR
Trigger: CCGCTTCCTCAGGAACACCAAGAAGTTCATCTCCCTGGGGAAGCATGCCAAGCTCTCGCTGCAGGAGCTGACGTGGAAGATGAGCGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CAAAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCAGCCAGTGCAGGAACTaGGCCAGGATCTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: QRRAGRGVNNGESGDGLFSQCRN*ARISSR
Trigger: GCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCT...GAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp ACGCATGTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATAGCCAGTGCAGGAACTaGGCCAGGATCTCCTCACGC +
Preference number: 5 (lower is better)
Translates to: THVPPSLEAAVEGETGSDSQCRN*ARISSR
Trigger: GCGTGAGGAGATCCTGGCCAAGTTCCTGCACTGGCT...ATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACATGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp GCTGGCGATGACCTCCGTGAGCCTGTCCTGGGGGATGGTGTCGTACGCGCCCGTTCTGATTCCAATGCTTaGCAACTTGCTCCAGACACT +
Preference number: 5 (lower is better)
Translates to: AGDDLREPVLGDGVVRARSDSNA*QLAPDT
Trigger: AGTGTCTGGAGCAAGTTGCAAAGCATTGGAATCAGA...ACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCACGGAGGTCATCGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp CCATCCAGGTGCAGGGTCCTCGCCTGTGTACAGGGCACACCTTTGGTCACTCCACCCGTCACATCCACCTaGACAAAGTACAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PSRCRVLACVQGTPLVTPPVTST*TKYSSG
Trigger: GCCTGAGCTGTACTTTGTCAAGGTGGATGTGACGGG...TGGAGTGACCAAAGGTGTGCCCTGTACACAGGCGAGGACCCTGCACCTGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp TGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTCAGCCCTTGGCTGGACACCCCGTCACATCCACCTaGACAAAGTACAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: CGEVKTAGVLDTQPLAGHPVTST*TKYSSG
Trigger: GCCTGAGCTGTACTTTGTCAAGGTGGATGTGACGGG...GTGTCCAGCCAAGGGCTGAGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGGCTCTTGAAGGCCTaGCGGACGTGCCCATGGGCG +
Preference number: 5 (lower is better)
Translates to: EAVSEMTRRKNVGFFQTCWLLKA*RTCPWA
Trigger: CGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCA...GCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp GTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTCTTGAGCAGGAATGCTaGGTGGCACAGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: VPPSLEAAVEGETGSDGGLEQEC*VAQPLH
Trigger: GTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAAG...ACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAACAGTCCAGGATGGTCTaGAAGTCTGAGGGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEEQSRMV*KSEGSA
Trigger: GGCACTGCCCTCAGACTTCAAGACCATCCTGGACTG...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTCAGTCCAGGATGGTCTaGAAGTCTGAGGGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VPPSLEAAVEGETGSDGGQSRMV*KSEGSA
Trigger: GGCACTGCCCTCAGACTTCAAGACCATCCTGGACTG...ACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp GCCGGACACTCAGCCTTCAGCCGGACATGCAGGCCTCGGCCAAACACTCACTCAGTACAGGGCACACCTTaGGTCACTCCAAATTCCCAG +
Preference number: 5 (lower is better)
Translates to: AGHSAFSRTCRPRPNTHSVQGTP*VTPNSQ
Trigger: CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTAC...TGAGTGAGTGTTTGGCCGAGGCCTGCATGTCCGGCTGAAGGCTGAGTGTCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp CGGAACACAGCCAACCCGGGCCAAGATGACCGCCCTCCTCGTGAGTCTCCACATAGGAATGAGAACTGCTaGAACCGAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RNTANPGQDDRPPRESPHRNENC*NRGGRG
Trigger: ACCTCTGCCTCCTCGGTTCAAGCAGTTCTCATTCCT...ATGTGGAGACTCACGAGGAGGGCGGTCATCTTGGCCCGGGTTGGCTGTGTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGTCCTGCAGCGAGAGCTaGGCATGCTTCCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLSCSES*ACFPRE
Trigger: CTCCCTGGGGAAGCATGCCAAGCTCTCGCTGCAGGA...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTAAAGAGCCTGTTCTTTaGAAACGTGGTCTCCGTGAC +
Preference number: 5 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTKEPVL*KRGLRD
Trigger: GTCACGGAGACCACGTTTCAAAAGAACAGGCTCTTT...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp CAAAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCCGGTGTCGAGTCAGCTaGAGCAGGAATGCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: QRRAGRGVNNGESGDGLFRCRVS*SRNAWW
Trigger: CCACCAAGCATTCCTGCTCAAGCTGACTCGACACCG...GAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GTTCCTCCCAGCCTTGAAGCCGCGGTTGAAGGTGAGACTGGCTCTGATGGAGGTAGGGAGATGAACTTCTaGGTGTTCCTGAGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: VPPSLEAAVEGETGSDGGREMNF*VFLRKR
Trigger: CCGCTTCCTCAGGAACACCAAGAAGTTCATCTCCCT...ACCTCCATCAGAGCCAGTCTCACCTTCAACCGCGGCTTCAAGGCTGGGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp TTTCGCGTGGGTGAGGTGAGGTGTCACCAACAAGAAATCATCCACCAAACGCAGTCCTGCAGCGAGAGCTaGGCATGCTTCCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: FRVGEVRCHQQEIIHQTQSCSES*ACFPRE
Trigger: CTCCCTGGGGAAGCATGCCAAGCTCTCGCTGCAGGA...CTGCGTTTGGTGGATGATTTCTTGTTGGTGACACCTCACCTCACCCACGCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp CTGGGGATGGACTATTCCTATGTGGGGAGTGGAAGCCGGGCTCCTGGTGAGGAACCAATGCTTTGCAACTaGCTCCAGACACTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LGMDYSYVGSGSRAPGEEPMLCN*LQTLFR
Trigger: CCGGAAGAGTGTCTGGAGCAAGTTGCAAAGCATTGG...TTCCTCACCAGGAGCCCGGCTTCCACTCCCCACATAGGAATAGTCCATCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp TGGAGCCGAGCGCCAGCCTGTGGGGAAGTGAAGACGGCAGGTGTGCTGGACACTTCTGATTCCAATGCTTaGCAACTTGCTCCAGACACT +
Preference number: 5 (lower is better)
Translates to: WSRAPACGEVKTAGVLDTSDSNA*QLAPDT
Trigger: AGTGTCTGGAGCAAGTTGCAAAGCATTGGAATCAGA...AGTGTCCAGCACACCTGCCGTCTTCACTTCCCCACAGGCTGGCGCTCGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp GGAAGTTCACCACTGTCTTCCGCAAGTTCACCACGCAGCCATACTCAGGGACACCTTGAGCAGGAATGCTaGGTGGCACAGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: GSSPLSSASSPRSHTQGHLEQEC*VAQPLH
Trigger: GTGCAGTGGCTGTGCCACCAAGCATTCCTGCTCAAG...GTGTCCCTGAGTATGGCTGCGTGGTGAACTTGCGGAAGACAGTGGTGAACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp GAGGATCTTGTAGATGTTGGTGCACACCGTCTGGAGGCTGTTCACCTGCAAATCCGTAGGACGTGGCTCTaGAAGGCCTTGCGGACGTGC +
Preference number: 5 (lower is better)
Translates to: EDLVDVGAHRLEAVHLQIRRTWL*KALRTC
Trigger: GCACGTCCGCAAGGCCTTCAAGAGCCACGTCCTACG...GATTTGCAGGTGAACAGCCTCCAGACGGTGTGCACCAACATCTACAAGATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR CAA 90 bp AAACCTGTACGCCTGCAGCAGGAGGATCTTGTAGATGTTGGTGCACACCGTCTGATGTTCCTCCCAGCCTaGAAGCCGCGGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: KPVRLQQEDLVDVGAHRLMFLPA*KPRLKV
Trigger: CACCTTCAACCGCGGCTTCAAGGCTGGGAGGAACAT...CAGACGGTGTGCACCAACATCTACAAGATCCTCCTGCTGCAGGCGTACAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp GTTGAAGGTGAGACTGGCTCTGATGGAGGTCCGGGCATAGCTGAGGAAGGTTTTCGGTGTCGAGTCAGCTaGAGCAGGAATGCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: VEGETGSDGGPGIAEEGFRCRVS*SRNAWW
Trigger: CCACCAAGCATTCCTGCTCAAGCTGACTCGACACCG...AAAACCTTCCTCAGCTATGCCCGGACCTCCATCAGAGCCAGTCTCACCTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR CAA 90 bp AGGGAGGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTCAGTCCAGGATGGTCTaGAAGTCTGAGGGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: REAVSEMTRRKNVGFFQTQSRMV*KSEGSA
Trigger: GGCACTGCCCTCAGACTTCAAGACCATCCTGGACTG...AGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp CAGGCTGTGACACTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTTACGTGTTCTGGGGTTaGATGATGCTGGCGATGACC +
Preference number: 5 (lower is better)
Translates to: QAVTLQPQDPKEFATHVPYVFWG*MMLAMT
Trigger: GGTCATCGCCAGCATCATCAAACCCCAGAACACGTA...AGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp ACGTCGCTAGATGCCATGGAGGCCAGCACAGGTAAAGCTGGGGTTTACCAGCAAAAGACCCCAAAGAGTTaGCGACGCATGTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: TSLDAMEASTGKAGVYQQKTPKS*RRMFLP
Trigger: TGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTT...TTGCTGGTAAACCCCAGCTTTACCTGTGCTGGCCTCCATGGCATCTAGCGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp CAGGCTGTGACACTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTGTACAGGGCACACCTTaGGTCACTCCAAATTCCCAG +
Preference number: 5 (lower is better)
Translates to: QAVTLQPQDPKEFATHVPVQGTP*VTPNSQ
Trigger: CTGGGAATTTGGAGTGACCAAAGGTGTGCCCTGTAC...AGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp GGCCGTGTCAGAGATGACGCGCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGTCCGTGAGCCTGTCCTaGACAAAGTACAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GRVRDDAQEKCGVLPNLLSVSLS*TKYSSG
Trigger: GCCTGAGCTGTACTTTGTCAAGGACAGGCTCACGGA...CAGCAAGTTTGGAAGAACCCCACATTTTTCCTGCGCGTCATCTCTGACACGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS-3UTR CAA 90 bp GAACAGTGCCTTCACCCTCGAGGTGAGACGCTCGGCCCTCTTTTCTCTGCGGAACAGCTACTCATGAGGTaGAGGAATGAGAACTGCTTG +
Preference number: 5 (lower is better)
Translates to: EQCLHPRGETLGPLFSAEQLLMR*RNENCL
Trigger: CAAGCAGTTCTCATTCCTCAACCTCATGAGTAGCTG...TTCCGCAGAGAAAAGAGGGCCGAGCGTCTCACCTCGAGGGTGAAGGCACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS-3UTR CAA 90 bp CAAAGGAGGGCAGGGCGAGGGGTGAACAATGGCGAATCTGGGGATGGACTATTCAAAGAGCCTGTTCTTTaGAAACGTGGTCTCCGTGAC +
Preference number: 5 (lower is better)
Translates to: QRRAGRGVNNGESGDGLFKEPVL*KRGLRD
Trigger: GTCACGGAGACCACGTTTCAAAAGAACAGGCTCTTT...GAATAGTCCATCCCCAGATTCGCCATTGTTCACCCCTCGCCCTGCCCTCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310581.10
ENST00000656021.1
CDS-3UTR CAA 90 bp CTTCAGCCGCAAGACCCCAAAGAGTTTGCGACGCATGTTCCTCCCAGCCTTGAATCTGATTCCAATGCTTaGCAACTTGCTCCAGACACT +
Preference number: 5 (lower is better)
Translates to: LQPQDPKEFATHVPPSLESDSNA*QLAPDT
Trigger: AGTGTCTGGAGCAAGTTGCAAAGCATTGGAATCAGA...TTCAAGGCTGGGAGGAACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS-3UTR CAA 90 bp GCAGGAAAAATGTGGGGTTCTTCCAAACTTGCTGATGAAATGGGAGCTGCAGCATACGTGTTCTGGGGTTaGATGATGCTGGCGATGACC +
Preference number: 5 (lower is better)
Translates to: AGKMWGSSKLADEMGAAAYVFWG*MMLAMT
Trigger: GGTCATCGCCAGCATCATCAAACCCCAGAACACGTA...TGCTGCAGCTCCCATTTCATCAGCAAGTTTGGAAGAACCCCACATTTTTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp GGCGGCCGTGCGTCCCAGGGCACGCACACCAGGCACTaGGCCACCAGCGCGCGGAAAGCCGCCGGGTCCCCG +
Preference number: 6 (lower is better)
Translates to: GGRASQGTHTRH*ATSARKAAGSP
Trigger: CGGGGACCCGGCGGCTTTCCGCGCGCTGGTGGCCCAGTGCCTGGTGTGCGTGCCCTGGGACGCACGGCCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS TCA 72 bp CTTCGGGGTCCACTAGCGTGTGGCGGGGGCCGGGCCTaGGTGGCAGCGCCGAGCTGGTACAGCGGCGGCCCG +
Preference number: 6 (lower is better)
Translates to: LRGPLACGGGRA*VAAPSWYSGGP
Trigger: CGGGCCGCCGCTGTACCAGCTCGGCGCTGCCACTCAGGCCCGGCCCCCGCCACACGCTAGTGGACCCCGAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp GCTCCGGCTCAGGGGCAGCGCCACGCCTGGGCCTCTTaGGCAACGGCAGACTTCGGCTGGCACTGCCCCCGC +
Preference number: 6 (lower is better)
Translates to: APAQGQRHAWAS*ATADFGWHCPR
Trigger: GCGGGGGCAGTGCCAGCCGAAGTCTGCCGTTGCCCAAGAGGCCCAGGCGTGGCGCTGCCCCTGAGCCGGAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS GCA 72 bp GCCCGCACGAAGCCGTACACCTGCCAGGGGCTGCTGTaGTGGCGGAGCAGCTGCACCAGGCGACGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: ARTKPYTCQGLL*WRSSCTRRRGS
Trigger: AGACCCCCGTCGCCTGGTGCAGCTGCTCCGCCAGCACAGCAGCCCCTGGCAGGTGTACGGCTTCGTGCGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp TTCGCATCCCAGACGCCTTCGGGGTCCACTAGCGTGTaGCGGGGGCCGGGCCTGAGTGGCAGCGCCGAGCTG +
Preference number: 6 (lower is better)
Translates to: FASQTPSGSTSV*RGPGLSGSAEL
Trigger: CAGCTCGGCGCTGCCACTCAGGCCCGGCCCCCGCCACACGCTAGTGGACCCCGAAGGCGTCTGGGATGCGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp GGCAGGCCCAGGGGGACCCCGGCCTCCCTGACGCTATaGTTCCAGGCCCGTTCGCATCCCAGACGCCTTCGG +
Preference number: 6 (lower is better)
Translates to: GRPRGTPASLTL*FQARSHPRRLR
Trigger: CCGAAGGCGTCTGGGATGCGAACGGGCCTGGAACCATAGCGTCAGGGAGGCCGGGGTCCCCCTGGGCCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp CCCGCGTGGTGCTGGCGGCCCACGGATGGGTGGGAGTaGCGCGTGCCAGAGAGCGCACCCTCCAAAGAGGTG +
Preference number: 6 (lower is better)
Translates to: PAWCWRPTDGWE*RVPESAPSKEV
Trigger: CACCTCTTTGGAGGGTGCGCTCTCTGGCACGCGCCACTCCCACCCATCCGTGGGCCGCCAGCACCACGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp TCTGTGTCCTCCTCCTCGGGGGCCGCCACAGAGCCCTaGGGCTTCTCCCGGGCACAGACACCGGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: SVSSSSGAATEP*GFSRAQTPAAG
Trigger: CCCAGCAGCCGGTGTCTGTGCCCGGGAGAAGCCCCAGGGCTCTGTGGCGGCCCCCGAGGAGGAGGACACAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS TCA 72 bp GCCACCAGCACAAAGAGCGCGCAGCGTGCCAGCAGGTaGACCAGCACGTCGTCGCCCACGCGGCGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ATSTKSAQRASR*TSTSSPTRRSS
Trigger: GCTGCTGCGCCGCGTGGGCGACGACGTGCTGGTTCACCTGCTGGCACGCTGCGCGCTCTTTGTGCTGGTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp GGTACAGCGGCGGCCCGCACACCTGGTAGGCGCAGCTaGGAGCCACCAGCACAAAGAGCGCGCAGCGTGCCA +
Preference number: 6 (lower is better)
Translates to: GTAAARTPGRRS*EPPAQRARSVP
Trigger: TGGCACGCTGCGCGCTCTTTGTGCTGGTGGCTCCCAGCTGCGCCTACCAGGTGTGCGGGCCGCCGCTGTACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS GCA 72 bp GCCAGCACGTTCTTCGCGCCGCGCTCGCACAGCCTCTaGAGCACTCGGGCCACCAGCTCCTTCAGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: ASTFFAPRSHSL*STRATSSFRQD
Trigger: GTCCTGCCTGAAGGAGCTGGTGGCCCGAGTGCTGCAGAGGCTGTGCGAGCGCGGCGCGAAGAACGTGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS GCA 72 bp GCAGCTGGGAGCCACCAGCACAAAGAGCGCGCAGCGTaGCAGCAGGTGAACCAGCACGTCGTCGCCCACGCG +
Preference number: 6 (lower is better)
Translates to: AAGSHQHKERAA*QQVNQHVVAHA
Trigger: CGCGTGGGCGACGACGTGCTGGTTCACCTGCTGGCACGCTGCGCGCTCTTTGTGCTGGTGGCTCCCAGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp GGATTGGCAGTCGCCTGCCCCACACGGAAGCAGAGGTaGACGCAACGGCCCTGCAGCAGCACCTGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: GLAVACPTRKQR*TQRPCSSTCPS
Trigger: GCTGGGGCAGGTGCTGCTGCAGGGCCGTTGCGTCCACCTCTGCTTCCGTGTGGGGCAGGCGACTGCCAATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503656.1
CDS CCA 72 bp CTGTCCTTGACAAAGTACAGCTCAGGCGGCGGGTCCTaGGCCCGCACACGCAGCACGAAGGTGCGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: LSLTKYSSGGGS*ARTRSTKVRQA
Trigger: GGCCTGGCGCACCTTCGTGCTGCGTGTGCGGGCCCAGGACCCGCCGCCTGAGCTGTACTTTGTCAAGGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS CAA 90 bp CCCAGATGGGACGAGGGGCACCCTGTGGCCTCTGACCCTTTGGGATaGGCAGTCGCCTGCCCCACACGGAAGCAGAGGTGGACGCAACGG +
Preference number: 6 (lower is better)
Translates to: PRWDEGHPVASDPLG*AVACPTRKQRWTQR
Trigger: CCGTTGCGTCCACCTCTGCTTCCGTGTGGGGCAGGCGACTGCCAATCCCAAAGGGTCAGAGGCCACAGGGTGCCCCTCGTCCCATCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503656.1
CDS GCA 72 bp GAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTaGGGCCGGAACACAGCCAACCCCTGGGCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: ELGQDLLTQTVL*GRNTANPWAPA
Trigger: CGCAGGAGCCCAGGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
CDS GCA 72 bp CCTGTGGCCTCTGACCCTTTGGGATTGGCAGTCGCCTaGCCCACACGGAAGCAGAGGTGGACGCAACGGCCC +
Preference number: 6 (lower is better)
Translates to: PVASDPLGLAVA*PTRKQRWTQRP
Trigger: GGGCCGTTGCGTCCACCTCTGCTTCCGTGTGGGGCAGGCGACTGCCAATCCCAAAGGGTCAGAGGCCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503656.1
CDS CCA 72 bp AGGACGTGGCTCTTGAAGGCCTTGCGGACGTGCCCATaGGCGGCCTTCTGGACCACGGCATACCGACGCACG +
Preference number: 6 (lower is better)
Translates to: RTWLLKALRTCP*AAFWTTAYRRT
Trigger: CGTGCGTCGGTATGCCGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000484238.6
CDS CAA 72 bp CCTGGCACTGGACGTAGGACGTGGCTCTTGAAGGCCTaGCGGACGTGCCCATGGGCGGCCTTCTGGACCACG +
Preference number: 6 (lower is better)
Translates to: PGTGRRTWLLKA*RTCPWAAFWTT
Trigger: CGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGTCCTACGTCCAGTGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000484238.6
CDS CAA 72 bp GACGAGGGGCACCCTGTGGCCTCTGACCCTTTGGGATaGGCAGTCGCCTGCCCCACACGGAAGCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: DEGHPVASDPLG*AVACPTRKQRW
Trigger: CCACCTCTGCTTCCGTGTGGGGCAGGCGACTGCCAATCCCAAAGGGTCAGAGGCCACAGGGTGCCCCTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503656.1
CDS GCA 72 bp TGCAGGAACTTGGCCAGGATCTCCTCACGCAGACGGTaGTCTGCGGCCGGAACACAGCCAACCCCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: CRNLARISSRRR*SAAGTQPTPGL
Trigger: GAGCCCAGGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTCCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
CDS GCA 72 bp GGACGTAGGACGTGGCTCTTGAAGGCCTTGCGGACGTaGCCATGGGCGGCCTTCTGGACCACGGCATACCGA +
Preference number: 6 (lower is better)
Translates to: GRRTWLLKALRT*PWAAFWTTAYR
Trigger: TCGGTATGCCGTGGTCCAGAAGGCCGCCCATGGGCACGTCCGCAAGGCCTTCAAGAGCCACGTCCTACGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460137.6
ENST00000484238.6
CDS CCA 72 bp AGTGGCGCGTGCCAGAGAGCGCACCCTCCAAAGAGGTaGCTTCTTCGGCGGGTCTGGCAGGTGACACCACAC +
Preference number: 6 (lower is better)
Translates to: SGACQRAHPPKR*LLRRVWQVTPH
Trigger: GTGTGGTGTCACCTGCCAGACCCGCCGAAGAAGCCACCTCTTTGGAGGGTGCGCTCTCTGGCACGCGCCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp ACGAGGGGCACCCTGTGGCCTCTGACCCTTTGGGATTaGCAGTCGCCTGCCCCACACGGAAGCAGAGGTGGA +
Preference number: 6 (lower is better)
Translates to: TRGTLWPLTLWD*QSPAPHGSRGG
Trigger: TCCACCTCTGCTTCCGTGTGGGGCAGGCGACTGCCAATCCCAAAGGGTCAGAGGCCACAGGGTGCCCCTCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503656.1
CDS CCA 72 bp GATGGGACGAGGGGCACCCTGTGGCCTCTGACCCTTTaGGATTGGCAGTCGCCTGCCCCACACGGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: DGTRGTLWPLTL*DWQSPAPHGSR
Trigger: TCTGCTTCCGTGTGGGGCAGGCGACTGCCAATCCCAAAGGGTCAGAGGCCACAGGGTGCCCCTCGTCCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503656.1
CDS CAA 72 bp AGATGGGACGAGGGGCACCCTGTGGCCTCTGACCCTTaGGGATTGGCAGTCGCCTGCCCCACACGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: RWDEGHPVASDP*GLAVACPTRKQ
Trigger: CTGCTTCCGTGTGGGGCAGGCGACTGCCAATCCCAAAGGGTCAGAGGCCACAGGGTGCCCCTCGTCCCATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503656.1
CDS CCA 72 bp GCTGCTCCTTGTCGCCTGAGGAGTAGAGGAAGTGCTTaGTCTCGGCGTACACCGGGGGACAAGGCGTGTCCC +
Preference number: 6 (lower is better)
Translates to: AAPCRLRSRGSA*SRRTPGDKACP
Trigger: GGGACACGCCTTGTCCCCCGGTGTACGCCGAGACCAAGCACTTCCTCTACTCCTCAGGCGACAAGGAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CCA 72 bp GCGCACCCTCCAAAGAGGTGGCTTCTTCGGCGGGTCTaGCAGGTGACACCACACAGAAACCACGGTCACTCG +
Preference number: 6 (lower is better)
Translates to: AHPPKRWLLRRV*QVTPHRNHGHS
Trigger: CGAGTGACCGTGGTTTCTGTGTGGTGTCACCTGCCAGACCCGCCGAAGAAGCCACCTCTTTGGAGGGTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS TCA 72 bp CTCCAAAGAGGTGGCTTCTTCGGCGGGTCTGGCAGGTaGCACCACACAGAAACCACGGTCACTCGGTCCACG +
Preference number: 6 (lower is better)
Translates to: LQRGGFFGGSGR*HHTETTVTRST
Trigger: CGTGGACCGAGTGACCGTGGTTTCTGTGTGGTGTCACCTGCCAGACCCGCCGAAGAAGCCACCTCTTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CAA 90 bp TCCTGCAGCGAGAGCTTGGCATGCTTCCCCAGGGAGATGAACTTCTaGGTGTTCCTGAGGAAGCGGCGTTCGTTGTGCCTGGAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: SCSESLACFPREMNF*VFLRKRRSLCLEPQ
Trigger: CTGGGGCTCCAGGCACAACGAACGCCGCTTCCTCAGGAACACCAAGAAGTTCATCTCCCTGGGGAAGCATGCCAAGCTCTCGCTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS TCA 72 bp AGCAGAGGCAGAGATCACCGTGTCCACTCGACGTCCTaGGCGAAAAGCCACGTGTGCCCACGTGACGATGGA +
Preference number: 6 (lower is better)
Translates to: SRGRDHRVHSTS*AKSHVCPRDDG
Trigger: TCCATCGTCACGTGGGCACACGTGGCTTTTCGCTCAGGACGTCGAGTGGACACGGTGATCTCTGCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656021.1
CDS GCA 72 bp GAACTTGGCCAGGATCTCCTCACGCAGACGGTGCTCTaGGGCCGGAACACAGCCAACCCCTTAAACGAGAAG +
Preference number: 6 (lower is better)
Translates to: ELGQDLLTQTVL*GRNTANPLNEK
Trigger: CTTCTCGTTTAAGGGGTTGGCTGTGTTCCGGCCGCAGAGCACCGTCTGCGTGAGGAGATCCTGGCCAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484238.6
CDS CAA 90 bp CAGTCCCGCACGCTCATCTTCCACGTCAGCTCCTGCAGCGAGAGCTaGGCATGCTTCCCCAGGGAGATGAACTTCTTGGTGTTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: QSRTLIFHVSSCSES*ACFPREMNFLVFLR
Trigger: CCTCAGGAACACCAAGAAGTTCATCTCCCTGGGGAAGCATGCCAAGCTCTCGCTGCAGGAGCTGACGTGGAAGATGAGCGTGCGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CAA 90 bp TTCTGGACCACGGCATACCGACGCACGCAGTACGTGTTCTGGGGTTaGATGATGCTGGCGATGACCTCCGTGAGCCTGTCCTTGACAAAG +
Preference number: 6 (lower is better)
Translates to: FWTTAYRRTQYVFWG*MMLAMTSVSLSLTK
Trigger: CTTTGTCAAGGACAGGCTCACGGAGGTCATCGCCAGCATCATCAAACCCCAGAACACGTACTGCGTGCGTCGGTATGCCGTGGTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460137.6
CDS CAA 72 bp GAGAGCTTGGCATGCTTCCCCAGGGAGATGAACTTCTaGGTGTTCCTGAGGAAGCGGCGTTCGTTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: ESLACFPREMNF*VFLRKRRSLCL
Trigger: CAGGCACAACGAACGCCGCTTCCTCAGGAACACCAAGAAGTTCATCTCCCTGGGGAAGCATGCCAAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS CAA 72 bp ACGCTCATCTTCCACGTCAGCTCCTGCAGCGAGAGCTaGGCATGCTTCCCCAGGGAGATGAACTTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: TLIFHVSSCSES*ACFPREMNFLV
Trigger: CACCAAGAAGTTCATCTCCCTGGGGAAGCATGCCAAGCTCTCGCTGCAGGAGCTGACGTGGAAGATGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1
CDS GCA 72 bp ATCTTCCACGTCAGCTCCTGCAGCGAGAGCTTGGCATaGTTCCCCAGGGAGATGAACTTCTTGGTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: IFHVSSCSESLA*FPREMNFLVFL
Trigger: CAGGAACACCAAGAAGTTCATCTCCCTGGGGAAGCATGCCAAGCTCTCGCTGCAGGAGCTGACGTGGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310581.10
ENST00000334602.10
ENST00000460137.6
ENST00000656021.1