Pregenerated sensors for TERF2IP (Homo sapiens)
Ensembl gene IDs: ENSG00000166848Ensembl transcript IDs: ENST00000300086.5, ENST00000564671.2, ENST00000569234.1, ENST00000653858.1, ENST00000659145.1
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCGCTTGCTGTCACCAGCAGCCCTTGGTGTTCTTGGCTTGCAGCTaGATAACTCCTGTCTTTAACTCCATCATCACGCGGTATTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: LACCHQQPLVFLACS*ITPVFNSIITRYFP Trigger: GGGGAAATACCGCGTGATGATGGAGTTAAAGACAGGAGTTATGCAGCTGCAAGCCAAGAACACCAAGGGCTGCTGGTGACAGCAAGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR TCA 90 bp | AGATGCCAGCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGGGTGAGAGGATTGCTTaGGCCCAAGAATTCGAGACC | + |
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Preference number: 2 (lower is better) Translates to: RCQQGQAPSSLAVTSSPWGERIA*AQEFET Trigger: GGTCTCGAATTCTTGGGCTCAAGCAATCCTCTCACC...CCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGCTGGCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTCGGTCACCAGCAGCCCTTaGTGTTCTTGGCTTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GRGWKSESRCQQGQAPSSVTSSP*CSWLAA Trigger: AGCTGCAAGCCAAGAACACCAAGGGCTGCTGGTGAC...CGAGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CCA 90 bp | GTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTCGCAATTCGAGACCAGCCTaGGCAACATGGCTAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: VGAGSLNQDASRARLPPRNSRPA*ATWLNP Trigger: AGGGTTTAGCCATGTTGCCCAGGCTGGTCTCGAATT...GCGAGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CCA 90 bp | ATTTATTCTCTCAGAGTGGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGAATTCGAGACCAGCCTaGGCAACATGGCTAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: IYSLRVVGAGSLNQDASRNSRPA*ATWLNP Trigger: AGGGTTTAGCCATGTTGCCCAGGCTGGTCTCGAATT...CCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACCACTCTGAGAGAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR GCA 90 bp | CTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGCACCCTATCAGGCATGGTGATTTaGACCTCTAGTCCAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: LGMIRCIPFLRRLQQSTLSGMVI*TSSPST Trigger: AGTGCTTGGACTAGAGGTGCAAATCACCATGCCTGA...TAGGGTGCTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR TCA 90 bp | CTTAAAACAACAGGAATTTATTCTCTCAGAGTGGTAGGGGCTGGAAGTCTGAATAAGGGTCAGGCATGGTaGTTTGCACCTCTAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LKTTGIYSLRVVGAGSLNKGQAW*FAPLVQ Trigger: TTGGACTAGAGGTGCAAATCACCATGCCTGACCCTT...ATTCAGACTTCCAGCCCCTACCACTCTGAGAGAATAAATTCCTGTTGTTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGTTTCTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAATCAGGCATGGTGATTTaGACCTCTAGTCCAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: KQFLGMIRCIPFLRRLQQSGMVI*TSSPST Trigger: AGTGCTTGGACTAGAGGTGCAAATCACCATGCCTGA...TTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAGAAACTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGGCTGTGTTTCCTCAAACTCCCGGGTaGCTTCCACAAGCATCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LVEKLFLLLLLPPHQAVFPQTPG*LPQASF Trigger: AAAAGATGCTTGTGGAAGCCACCCGGGAGTTTGAGG...AAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569234.1 |
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| 3UTR-3UTR TCA 90 bp | TTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCACAGGTGAGAGGATTGCTTaGGCCCAAGAATTCGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: FHISFISCLVCSQMCHSTGERIA*AQEFET Trigger: GGTCTCGAATTCTTGGGCTCAAGCAATCCTCTCACC...TGTGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR TCA 90 bp | TTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCACAAAGGGTCAGGCATGGTaGTTTGCACCTCTAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: FHISFISCLVCSQMCHSTKGQAW*FAPLVQ Trigger: TTGGACTAGAGGTGCAAATCACCATGCCTGACCCTT...TGTGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CCA 90 bp | TTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCACACAGAGTGGTAGGGGCTaGAAGTCTGAATCAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: FHISFISCLVCSQMCHSTQSGRG*KSESRC Trigger: GCATCTTGATTCAGACTTCCAGCCCCTACCACTCTG...TGTGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCACAGAGTGGTAGGGGCTaGAAGTCTGAATCAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: CFTSVSFPVWYVLKCAIAQSGRG*KSESRC Trigger: GCATCTTGATTCAGACTTCCAGCCCCTACCACTCTG...TGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR TCA 90 bp | TTACATCGGATGAGGACCCATCTTAATGACCTAACAATGTTGTCACAAATTTTAAAAACTCCCAGGCAGTaGCTAATGGGCAAACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LHRMRTHLNDLTMLSQILKTPRQ*LMGKQP Trigger: TGGCTGTTTGCCCATTAGTCACTGCCTGGGAGTTTT...TAAAATTTGTGACAACATTGTTAGGTCATTAAGATGGGTCCTCATCCGATGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR CAA 90 bp | GAGAAAACAGTAGGAGGAATAATATATGATAGAGTGTTAACTGGATaGCTTCTGGCCAAAAGTAGAGATAAAGGGTCAGGCATGGTGATT | + |
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Preference number: 2 (lower is better) Translates to: EKTVGGIIYDRVLTG*LLAKSRDKGSGMVI Trigger: AATCACCATGCCTGACCCTTTATCTCTACTTTTGGCCAGAAGCAATCCAGTTAACACTCTATCATATATTATTCCTCCTACTGTTTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR GCA 72 bp | TCTCAGAGTGGTAGGGGCTGGAAGTCTGAATCAAGATaGCAGCAGGGCCAGGCTCCCTCCTCGCTTGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SQSGRGWKSESR*QQGQAPSSLAV Trigger: GACAGCAAGCGAGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACCACTCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CAA 90 bp | GTGGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTGCTGAGGTGAGAGGATaGCTTGAGCCCAAGAATTCG | + |
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Preference number: 3 (lower is better) Translates to: VVGAGSLNQDASRARLPPAEVRG*LEPKNS Trigger: CGAATTCTTGGGCTCAAGCAATCCTCTCACCTCAGC...AGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CAA 90 bp | AGGCTCAGCACTTTCCAGTCTCAAACCCTGGGACTCAAGCAGTTTCTGGGAATGAGGCTCCCTCCTCGCTaGCTGTCACCAGCAGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: RLSTFQSQTLGLKQFLGMRLPPR*LSPAAL Trigger: AAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCT...CATTCCCAGAAACTGCTTGAGTCCCAGGGTTTGAGACTGGAAAGTGCTGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR CCA 72 bp | TGCTCAGCCTTTCCTACCTACTCACCCTCGCCAAGGTaGCATCTGGTAGTGAGGGAGGCTCAGCACTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: CSAFPTYSPSPR*HLVVREAQHFP Trigger: TGGAAAGTGCTGAGCCTCCCTCACTACCAGATGCCACCTTGGCGAGGGTGAGTAGGTAGGAAAGGCTGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CAA 90 bp | GCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGTGTTCTTGAGAGTGTTAACTGGATaGCTTCTGGCCAAAAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: AGPGSLLACCHQQPLVFLRVLTG*LLAKSR Trigger: TCTACTTTTGGCCAGAAGCAATCCAGTTAACACTCT...CAAGAACACCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR GCA 72 bp | TGTCACCAGCAGCCCTTGGTGTTCTTGGCTTGCAGCTaGATAACTCCTGTCTTTAACTCCATCATCACGCGG | + |
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Preference number: 3 (lower is better) Translates to: CHQQPLVFLACS*ITPVFNSIITR Trigger: CCGCGTGATGATGGAGTTAAAGACAGGAGTTATGCAGCTGCAAGCCAAGAACACCAAGGGCTGCTGGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR GCA 72 bp | GCTTGCTGTCACCAGCAGCCCTTGGTGTTCTTGGCTTaGAGCTGCATAACTCCTGTCTTTAACTCCATCATC | + |
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Preference number: 3 (lower is better) Translates to: ACCHQQPLVFLA*SCITPVFNSII Trigger: GATGATGGAGTTAAAGACAGGAGTTATGCAGCTGCAAGCCAAGAACACCAAGGGCTGCTGGTGACAGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CAA 90 bp | ATTTATTCTCTCAGAGTGGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGCTTGGTGTTCTTGGCTaGCAGCTGCATAACTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: IYSLRVVGAGSLNQDASRLGVLG*QLHNSC Trigger: ACAGGAGTTATGCAGCTGCAAGCCAAGAACACCAAG...CCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACCACTCTGAGAGAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CAA 90 bp | CAGTTTCTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGCCAGCCCTTGGTGTTCTaGGCTTGCAGCTGCATAACT | + |
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Preference number: 3 (lower is better) Translates to: QFLGMIRCIPFLRRLQQSQPLVF*ACSCIT Trigger: AGTTATGCAGCTGCAAGCCAAGAACACCAAGGGCTG...GCTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAGAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CAA 90 bp | TTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCACAAGGCTCCCTCCTCGCTaGCTGTCACCAGCAGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: FHISFISCLVCSQMCHSTRLPPR*LSPAAL Trigger: AAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCT...TGTGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CAA 90 bp | TGTTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCATGTCACCAGCAGCCCTaGGTGTTCTTGGCTTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: CFTSVSFPVWYVLKCAIACHQQP*VFLACS Trigger: GCTGCAAGCCAAGAACACCAAGGGCTGCTGGTGACA...TGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR-3UTR CAA 90 bp | TTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCACAGCTGAGGTGAGAGGATaGCTTGAGCCCAAGAATTCG | + |
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Preference number: 3 (lower is better) Translates to: FHISFISCLVCSQMCHSTAEVRG*LEPKNS Trigger: CGAATTCTTGGGCTCAAGCAATCCTCTCACCTCAGC...TGTGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR TCA 90 bp | GCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGTGTTCTTGACAAGGCGTTACCGGTaGCGGAGCTGGGCGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: AGPGSLLACCHQQPLVFLTRRYR*RSWASG Trigger: CCCGCTCGCCCAGCTCCGTCACCGGTAACGCCTTGT...CAAGAACACCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR CCA 90 bp | AGATGCCAGCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGGACGCTTGGCCGGGCTaGGCCGCACGTAGAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: RCQQGQAPSSLAVTSSPWDAWPG*AARRRT Trigger: TGTCCTTCTACGTGCGGCCCAGCCCGGCCAAGCGTC...CCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGCTGGCATCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR TCA 90 bp | GTGGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTCGTCGTCCGCATCCGTaGAGGCGATCCGCCCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: VVGAGSLNQDASRARLPPRRPHP*RRSARR Trigger: ACGCCGGGCGGATCGCCTTCACGGATGCGGACGACG...AGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR CCA 90 bp | AGATGCCAGCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGAGGTACTTATGCTCCTaGCCCCGCAGGTGCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RCQQGQAPSSLAVTSSPWRYLCS*PRRCLR Trigger: CCTCAAGCACCTGCGGGGCCAGGAGCATAAGTACCT...CCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGCTGGCATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR GCA 90 bp | AGATGCCAGCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGAGAAGGACATGGAGCTaGCGTCGTCCCTCACGAACA | + |
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Preference number: 4 (lower is better) Translates to: RCQQGQAPSSLAVTSSPWRRTWS*RRPSRT Trigger: TGTTCGTGAGGGACGACGGCAGCTCCATGTCCTTCT...CCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGCTGGCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR CCA 90 bp | GCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGTGTTCTTGGTCACCAGCAGCCCTTaGTGTTCTTGGCTTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AGPGSLLACCHQQPLVFLVTSSP*CSWLAA Trigger: AGCTGCAAGCCAAGAACACCAAGGGCTGCTGGTGAC...CAAGAACACCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR GCA 90 bp | GTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTCGCAAGTCTGAATCAAGATaGCAGCAGGGCCAGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VGAGSLNQDASRARLPPRKSESR*QQGQAP Trigger: GGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTT...GCGAGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR CCA 90 bp | GTGGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTTCACCCTCGCCAAGGTaGCATCTGGTAGTGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VVGAGSLNQDASRARLPPSPSPR*HLVVRE Trigger: CTCCCTCACTACCAGATGCCACCTTGGCGAGGGTGA...AGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| 3UTR CAA 72 bp | AATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTCGCTaGCTGTCACCAGCAGCCCTTGGTGTTCTTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: NQDASRARLPPR*LSPAALGVLGL Trigger: CAAGCCAAGAACACCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGCTGGCATCTTGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR CCA 90 bp | TGTCTCCGCCACGTCATTTCCCTGCTTCTTGTAAGAACGCCAGTTACATCGGATTCGACAGCCGACGCTTaGCCGGGCTGGGCCGCACGT | + |
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Preference number: 4 (lower is better) Translates to: CLRHVISLLLVRTPVTSDSTADA*PGWAAR Trigger: ACGTGCGGCCCAGCCCGGCCAAGCGTCGGCTGTCGA...ATCCGATGTAACTGGCGTTCTTACAAGAAGCAGGGAAATGACGTGGCGGAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR CCA 90 bp | GCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGTGTTCTTGAATTCGAGACCAGCCTaGGCAACATGGCTAAACCCT | + |
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Preference number: 4 (lower is better) Translates to: AGPGSLLACCHQQPLVFLNSRPA*ATWLNP Trigger: AGGGTTTAGCCATGTTGCCCAGGCTGGTCTCGAATT...CAAGAACACCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR GCA 90 bp | CTTCTGGCCAAAAGTAGAGATAAAGGGTCAGGCATGGTGATTTGCACCTCTAGTACGGCCCCGGGCTCCTaGACTCGGCACACGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: LLAKSRDKGSGMVICTSSTAPGS*TRHTVP Trigger: CGGCACCGTGTGCCGAGTGCAGGAGCCCGGGGCCGT...ACTAGAGGTGCAAATCACCATGCCTGACCCTTTATCTCTACTTTTGGCCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR TCA 90 bp | TCTGGTAGTGAGGGAGGCTCAGCACTTTCCAGTCTCAAACCCTGGGACTCAAGCCACACAGAGCTCAACTaGCTGAGCTGTCACCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SGSEGGSALSSLKPWDSSHTELN*LSCHRR Trigger: TCTGCGGTGACAGCTCAGTCAGTTGAGCTCTGTGTG...GCTTGAGTCCCAGGGTTTGAGACTGGAAAGTGCTGAGCCTCCCTCACTACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR GCA 90 bp | AGGCTCAGCACTTTCCAGTCTCAAACCCTGGGACTCAAGCAGTTTCTGGGAATGGACTGCCACGAGTGCTaGGTGAGCGAGCTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RLSTFQSQTLGLKQFLGMDCHEC*VSELFS Trigger: GGAGAAGAGCTCGCTCACGCAGCACTCGTGGCAGTC...CATTCCCAGAAACTGCTTGAGTCCCAGGGTTTGAGACTGGAAAGTGCTGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR TCA 90 bp | CAGTTTCTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGCGGCCCCGCAGGTGCTTaGGGTAGCGGTCCTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QFLGMIRCIPFLRRLQQSGPAGA*GSGPSG Trigger: CCCTGAAGGACCGCTACCTCAAGCACCTGCGGGGCC...GCTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAGAAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR TCA 90 bp | CTTAAAACAACAGGAATTTATTCTCTCAGAGTGGTAGGGGCTGGAAGTCTGAATCGCCGCCGTGCAGGATaGGCGTCGACAGCCGACGCT | + |
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Preference number: 4 (lower is better) Translates to: LKTTGIYSLRVVGAGSLNRRRAG*ASTADA Trigger: AGCGTCGGCTGTCGACGCTCATCCTGCACGGCGGCG...ATTCAGACTTCCAGCCCCTACCACTCTGAGAGAATAAATTCCTGTTGTTTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR GCA 90 bp | TCTGGTAGTGAGGGAGGCTCAGCACTTTCCAGTCTCAAACCCTGGGACTCAAGCATCGTGCCACAGCACTaGATTCTGGGTGATGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SGSEGGSALSSLKPWDSSIVPQH*ILGDGN Trigger: ATTCCCATCACCCAGAATGCAGTGCTGTGGCACGAT...GCTTGAGTCCCAGGGTTTGAGACTGGAAAGTGCTGAGCCTCCCTCACTACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR TCA 90 bp | GCCAAAAGTAGAGATAAAGGGTCAGGCATGGTGATTTGCACCTCTAGTCCAAGCTGTACTGCGTGGAGATaGAATCACCCGAGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: AKSRDKGSGMVICTSSPSCTAWR*NHPRPR Trigger: CCGAGGCCTCGGGTGATTTCATCTCCACGCAGTACA...GCTTGGACTAGAGGTGCAAATCACCATGCCTGACCCTTTATCTCTACTTTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653858.1 |
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| CDS-3UTR TCA 90 bp | CTGGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGGCTGTGTTTGGCCCCGCAGGTGCTTaGGGTAGCGGTCCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVEKLFLLLLLPPHQAVFGPAGA*GSGPSG Trigger: CCCTGAAGGACCGCTACCTCAAGCACCTGCGGGGCC...AAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569234.1 |
||
| CDS-3UTR GCA 90 bp | TCTGGTAGTGAGGGAGGCTCAGCACTTTCCAGTCTCAAACCCTGGGACTCAAGCAGAGAAGGCATACCCTaGCCAGATACAGGAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSEGGSALSSLKPWDSSREGIP*PDTGES Trigger: AGATTCTCCTGTATCTGGGCAGGGTATGCCTTCTCT...GCTTGAGTCCCAGGGTTTGAGACTGGAAAGTGCTGAGCCTCCCTCACTACCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGCACTTTCCAGTCTCAAACCCTGGGACTCAAGCAGTTTCTGGGAATGAGTTCTCTTATTCTGTaGTTCCCCGCTATCCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSTFQSQTLGLKQFLGMSSLIL*FPAIRG Trigger: GCCGCGGATAGCGGGGAACCACAGAATAAGAGAACT...CATTCCCAGAAACTGCTTGAGTCCCAGGGTTTGAGACTGGAAAGTGCTGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGTTTCTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACACAGAGCTCAACTGACTaGGCTGTCACCGCAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAVSGNDTMYSFLKAAATQSSTD*AVTADA Trigger: GGCGTCTGCGGTGACAGCTCAGTCAGTTGAGCTCTG...TGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAGAAACTGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | TGTCTCCGCCACGTCATTTCCCTGCTTCTTGTAAGAACGCCAGTTACATCGGATGGTGGGAGAATTGCTTaGGCCTGGGAAATTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLRHVISLLLVRTPVTSDGGRIA*AWEIEA Trigger: AGCCTCAATTTCCCAGGCTCAAGCAATTCTCCCACC...ATCCGATGTAACTGGCGTTCTTACAAGAAGCAGGGAAATGACGTGGCGGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | TGTCTCCGCCACGTCATTTCCCTGCTTCTTGTAAGAACGCCAGTTACATCGGATGGTGAGAGGATTGCTTaGGCCCAAGAATTCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: CLRHVISLLLVRTPVTSDGERIA*AQEFET Trigger: GGTCTCGAATTCTTGGGCTCAAGCAATCCTCTCACC...ATCCGATGTAACTGGCGTTCTTACAAGAAGCAGGGAAATGACGTGGCGGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | TTATTCTCTCAGAGTGGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGAGTGGTAGGGGCTaGAAGTCTGAATCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSQSGRGWKSESRCQQGQSGRG*KSESRC Trigger: GCATCTTGATTCAGACTTCCAGCCCCTACCACTCTG...GCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACCACTCTGAGAGAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR GCA 90 bp | TTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCACAACGGTGCCGCCGCCGTaGAGGATGAGCGTCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHISFISCLVCSQMCHSTTVPPP*RMSVDS Trigger: GCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGT...TGTGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
||
| CDS-3UTR GCA 90 bp | TGGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGGCTGTGTTTCCCCAGCAGGTACTTATaGTCCTGGCCCCGCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLRNFFFFFFFLLIRLCFPSRYL*SWPRRC Trigger: GCACCTGCGGGGCCAGGAGCATAAGTACCTGCTGGG...GAAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000569234.1 |
||
| CDS-3UTR TCA 90 bp | CTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGCACCCTAGGTGGGAGAATTGCTTaGGCCTGGGAAATTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGMIRCIPFLRRLQQSTLGGRIA*AWEIEA Trigger: AGCCTCAATTTCCCAGGCTCAAGCAATTCTCCCACC...TAGGGTGCTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | ATTTATTCTCTCAGAGTGGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGAAGGGTCAGGCATGGTaGTTTGCACCTCTAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IYSLRVVGAGSLNQDASRKGQAW*FAPLVQ Trigger: TTGGACTAGAGGTGCAAATCACCATGCCTGACCCTT...CCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACCACTCTGAGAGAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR GCA 90 bp | TGGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGGCTGTGTTTCGGCGGGGCCAAGCGCTaGTACCGAAGATGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WLRNFFFFFFFLLIRLCFGGAKR*YRRCQD Trigger: ATCTTGGCATCTTCGGTAGCAGCGCTTGGCCCCGCC...GAAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569234.1 |
||
| CDS-3UTR GCA 90 bp | TGTCTCCGCCACGTCATTTCCCTGCTTCTTGTAAGAACGCCAGTTACATCGGATTCAGGCATGGTGATTTaGACCTCTAGTCCAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CLRHVISLLLVRTPVTSDSGMVI*TSSPST Trigger: AGTGCTTGGACTAGAGGTGCAAATCACCATGCCTGA...ATCCGATGTAACTGGCGTTCTTACAAGAAGCAGGGAAATGACGTGGCGGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | CTGGCCAAAAGTAGAGATAAAGGGTCAGGCATGGTGATTTGCACCTCTAGTCCACCTCAAACTCCCGGGTaGCTTCCACAAGCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LAKSRDKGSGMVICTSSPPQTPG*LPQASF Trigger: AAAAGATGCTTGTGGAAGCCACCCGGGAGTTTGAGG...TGGACTAGAGGTGCAAATCACCATGCCTGACCCTTTATCTCTACTTTTGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | ATTTATTCTCTCAGAGTGGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGTCCAGTCTCAAACCCTaGGACTCAAGCAGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYSLRVVGAGSLNQDASRSSLKP*DSSSFW Trigger: CCAGAAACTGCTTGAGTCCCAGGGTTTGAGACTGGA...CCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACCACTCTGAGAGAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTTTCTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAATCACCCTCGCCAAGGTaGCATCTGGTAGTGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQFLGMIRCIPFLRRLQQSPSPR*HLVVRE Trigger: CTCCCTCACTACCAGATGCCACCTTGGCGAGGGTGA...TTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAGAAACTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAAAAGTAGAGATAAAGGGTCAGGCATGGTGATTTGCACCTCTAGTCCAATGGGAATGAGATCCTaGTGTAGAGAAGGCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: LAKSRDKGSGMVICTSSPMGMRS*CREGIP Trigger: GGGTATGCCTTCTCTACATCAGGATCTCATTCCCAT...TGGACTAGAGGTGCAAATCACCATGCCTGACCCTTTATCTCTACTTTTGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | CTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGCACCCTAAAGGGTCAGGCATGGTaGTTTGCACCTCTAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGMIRCIPFLRRLQQSTLKGQAW*FAPLVQ Trigger: TTGGACTAGAGGTGCAAATCACCATGCCTGACCCTT...TAGGGTGCTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | CTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGCACCCTAAAAACTCCCAGGCAGTaGCTAATGGGCAAACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGMIRCIPFLRRLQQSTLKTPRQ*LMGKQP Trigger: TGGCTGTTTGCCCATTAGTCACTGCCTGGGAGTTTT...TAGGGTGCTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR GCA 90 bp | TGGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGGCTGTGTTTCCGCTGCTACCGAAGATaGCAAGATGGACGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLRNFFFFFFFLLIRLCFRCYRR*QDGRQA Trigger: TGCCTGGCGTCCATCTTGGCATCTTCGGTAGCAGCG...GAAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569234.1 |
||
| CDS-3UTR CCA 90 bp | CTGGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGGCTGTGTTTAGGTACTTATGCTCCTaGCCCCGCAGGTGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVEKLFLLLLLPPHQAVFRYLCS*PRRCLR Trigger: CCTCAAGCACCTGCGGGGCCAGGAGCATAAGTACCT...AAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569234.1 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTTTCTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAGTCACCAGCAGCCCTTaGTGTTCTTGGCTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQFLGMIRCIPFLRRLQQVTSSP*CSWLAA Trigger: AGCTGCAAGCCAAGAACACCAAGGGCTGCTGGTGAC...TTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAGAAACTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGCCAAAAGTAGAGATAAAGGGTCAGGCATGGTGATTTGCACCTCTAGTTCCAGTCTCAAACCCTaGGACTCAAGCAGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLAKSRDKGSGMVICTSSSSLKP*DSSSFW Trigger: CCAGAAACTGCTTGAGTCCCAGGGTTTGAGACTGGA...ACTAGAGGTGCAAATCACCATGCCTGACCCTTTATCTCTACTTTTGGCCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | GCAGTTTCTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGAAAACTCCCAGGCAGTaGCTAATGGGCAAACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVSGNDTMYSFLKAAATKKTPRQ*LMGKQP Trigger: TGGCTGTTTGCCCATTAGTCACTGCCTGGGAGTTTT...CTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAGAAACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR GCA 90 bp | CTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGCACCCTAAGAGAAGGCATACCCTaGCCAGATACAGGAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LGMIRCIPFLRRLQQSTLREGIP*PDTGES Trigger: AGATTCTCCTGTATCTGGGCAGGGTATGCCTTCTCT...TAGGGTGCTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | CTTAAAACAACAGGAATTTATTCTCTCAGAGTGGTAGGGGCTGGAAGTCTGAATGGTGAGAGGATTGCTTaGGCCCAAGAATTCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LKTTGIYSLRVVGAGSLNGERIA*AQEFET Trigger: GGTCTCGAATTCTTGGGCTCAAGCAATCCTCTCACC...ATTCAGACTTCCAGCCCCTACCACTCTGAGAGAATAAATTCCTGTTGTTTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCGCCACGTCATTTCCCTGCTTCTTGTAAGAACGCCAGTTACATCGGATAGAGATGGACACCTCTaGTTGAGAAACTTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLRHVISLLLVRTPVTSDRDGHL*LRNFFF Trigger: GAAGAAAAAGTTTCTCAACCAGAGGTGTCCATCTCT...ATCCGATGTAACTGGCGTTCTTACAAGAAGCAGGGAAATGACGTGGCGGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564671.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTTTCTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAACAGAGTGGTAGGGGCTaGAAGTCTGAATCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: KQFLGMIRCIPFLRRLQQQSGRG*KSESRC Trigger: GCATCTTGATTCAGACTTCCAGCCCCTACCACTCTG...TTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAGAAACTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAAAAGTAGAGATAAAGGGTCAGGCATGGTGATTTGCACCTCTAGTCCAATGGACACCTCTGGTTaGGAAACTTTTTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAKSRDKGSGMVICTSSPMDTSG*ETFSSS Trigger: AGAAGAAGAAAAAGTTTCTCAACCAGAGGTGTCCAT...TGGACTAGAGGTGCAAATCACCATGCCTGACCCTTTATCTCTACTTTTGGCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000564671.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCAAAGTCTGAATCAAGATaGCAGCAGGGCCAGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CFTSVSFPVWYVLKCAIAKSESR*QQGQAP Trigger: GGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTT...TGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | TTACATCGGATGAGGACCCATCTTAATGACCTAACAATGTTGTCACAAATTTTAGCACGTAGAAGGACATaGAGCTGCCGTCGTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRMRTHLNDLTMLSQILARRRT*SCRRPS Trigger: TGAGGGACGACGGCAGCTCCATGTCCTTCTACGTGC...TAAAATTTGTGACAACATTGTTAGGTCATTAAGATGGGTCCTCATCCGATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | CTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGCACCCTAATGACTGTGAAGAGATaGACACCTCTGGTTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGMIRCIPFLRRLQQSTLMTVKR*TPLVEK Trigger: TTTCTCAACCAGAGGTGTCCATCTCTTCACAGTCAT...TAGGGTGCTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564671.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGGCTGTGTTTGCTCCCACCTCTGGTTaGGAAACTTTTTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVEKLFLLLLLPPHQAVFAPTSG*ETFSSS Trigger: AGAAGAAGAAAAAGTTTCTCAACCAGAGGTGGGAGC...AAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000569234.1 |
||
| CDS-3UTR CCA 90 bp | TGGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGGCTGTGTTTCAGTTCTCTTATTCTGTaGTTCCGGATGTCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLRNFFFFFFFLLIRLCFSSLIL*FRMSTG Trigger: CCCTGTTGACATCCGGAACCACAGAATAAGAGAACT...GAAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569234.1 |
||
| CDS-3UTR CCA 90 bp | TTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCACAAATTCGAGACCAGCCTaGGCAACATGGCTAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: FHISFISCLVCSQMCHSTNSRPA*ATWLNP Trigger: AGGGTTTAGCCATGTTGCCCAGGCTGGTCTCGAATT...TGTGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR GCA 90 bp | TTCTGTTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAATCGTGCCACAGCACTaGATTCTGGGTGATGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FCFTSVSFPVWYVLKCAIIVPQH*ILGDGN Trigger: ATTCCCATCACCCAGAATGCAGTGCTGTGGCACGAT...TATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAACAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR TCA 90 bp | TTACATCGGATGAGGACCCATCTTAATGACCTAACAATGTTGTCACAAATTTTAATGGGAATGAGATCCTaGTGTAGAGAAGGCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: LHRMRTHLNDLTMLSQILMGMRS*CREGIP Trigger: GGGTATGCCTTCTCTACATCAGGATCTCATTCCCAT...TAAAATTTGTGACAACATTGTTAGGTCATTAAGATGGGTCCTCATCCGATGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR CCA 90 bp | TTTCACATCAGTTTCATTTCCTGTTTGGTATGTTCTCAAATGTGCCATAGCACAATGACTGTGAAGAGATaGACACCACAACCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FHISFISCLVCSQMCHSTMTVKR*TPQPPQ Trigger: TTGAGGAGGTTGTGGTGTCCATCTCTTCACAGTCAT...TGTGCTATGGCACATTTGAGAACATACCAAACAGGAAATGAAACTGATGTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
||
| 3UTR CAA 72 bp | GTAGGAGGAATAATATATGATAGAGTGTTAACTGGATaGCTTCTGGCCAAAAGTAGAGATAAAGGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGGIIYDRVLTG*LLAKSRDKGSG Trigger: GCCTGACCCTTTATCTCTACTTTTGGCCAGAAGCAATCCAGTTAACACTCTATCATATATTATTCCTCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS GCA 90 bp | AGCACGGCCCCGGGCTCCTGCACTCGGCACACGGTGCCGCCGCCGTaGAGGATGAGCGTCGACAGCCGACGCTTGGCCGGGCTGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: STAPGSCTRHTVPPP*RMSVDSRRLAGLGR Trigger: GCGGCCCAGCCCGGCCAAGCGTCGGCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGTGTGCCGAGTGCAGGAGCCCGGGGCCGTGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300086.5 ENST00000653858.1 |
||
| CDS TCA 90 bp | CCCCGGGCTCCTGCACTCGGCACACGGTGCCGCCGCCGTGCAGGATaGGCGTCGACAGCCGACGCTTGGCCGGGCTGGGCCGCACGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRAPALGTRCRRRAG*ASTADAWPGWAARR Trigger: TCTACGTGCGGCCCAGCCCGGCCAAGCGTCGGCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGTGTGCCGAGTGCAGGAGCCCGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300086.5 ENST00000653858.1 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGTGTTCTTGTGTCACCAGCAGCCCTaGGTGTTCTTGGCTTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGPGSLLACCHQQPLVFLCHQQP*VFLACS Trigger: GCTGCAAGCCAAGAACACCAAGGGCTGCTGGTGACA...CAAGAACACCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
||
| CDS-3UTR CAA 90 bp | TGTCTCCGCCACGTCATTTCCCTGCTTCTTGTAAGAACGCCAGTTACATCGGATGTCGACAGCCGACGCTaGGCCGGGCTGGGCCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: CLRHVISLLLVRTPVTSDVDSRR*AGLGRT Trigger: CGTGCGGCCCAGCCCGGCCAAGCGTCGGCTGTCGAC...ATCCGATGTAACTGGCGTTCTTACAAGAAGCAGGGAAATGACGTGGCGGAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653858.1 |
||
| CDS GCA 90 bp | CTTATTCTGTGGTTCCGGATGTCAACAGGGGGCGGGGCCAAGCGCTaGTACCGAAGATGCCAAGATGGACGCCAGGCAGCCAGGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LILWFRMSTGGGAKR*YRRCQDGRQAARRK Trigger: CTTTCTCCTGGCTGCCTGGCGTCCATCTTGGCATCTTCGGTAGCAGCGCTTGGCCCCGCCCCCTGTTGACATCCGGAACCACAGAATAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569234.1 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGTGTTCTTGCAGCCCTTGGTGTTCTaGGCTTGCAGCTGCATAACT | + |
|
Preference number: 5 (lower is better) Translates to: AGPGSLLACCHQQPLVFLQPLVF*ACSCIT Trigger: AGTTATGCAGCTGCAAGCCAAGAACACCAAGGGCTG...CAAGAACACCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR CAA 90 bp | GGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTCGCTTGGCTGAGGTGAGAGGATaGCTTGAGCCCAAGAATTCG | + |
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Preference number: 5 (lower is better) Translates to: GAGSLNQDASRARLPPRLAEVRG*LEPKNS Trigger: CGAATTCTTGGGCTCAAGCAATCCTCTCACCTCAGC...CAAGCGAGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR CAA 90 bp | GGTAGGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTCGGCTGAGGTGAGAGGATaGCTTGAGCCCAAGAATTCG | + |
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Preference number: 5 (lower is better) Translates to: GRGWKSESRCQQGQAPSSAEVRG*LEPKNS Trigger: CGAATTCTTGGGCTCAAGCAATCCTCTCACCTCAGC...CGAGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR CAA 90 bp | GCAGGGCCAGGCTCCCTCCTCGCTTGCTGTCACCAGCAGCCCTTGGTGTTCTTGCTTGGTGTTCTTGGCTaGCAGCTGCATAACTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: AGPGSLLACCHQQPLVFLLGVLG*QLHNSC Trigger: ACAGGAGTTATGCAGCTGCAAGCCAAGAACACCAAG...CAAGAACACCAAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCTGGCCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR CAA 90 bp | GGGGCTGGAAGTCTGAATCAAGATGCCAGCAGGGCCAGGCTCCCTCCTCGCTTGCTTGGTGTTCTTGGCTaGCAGCTGCATAACTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: GAGSLNQDASRARLPPRLLGVLG*QLHNSC Trigger: ACAGGAGTTATGCAGCTGCAAGCCAAGAACACCAAG...CAAGCGAGGAGGGAGCCTGGCCCTGCTGGCATCTTGATTCAGACTTCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR CAA 90 bp | CTGGCCAAAAGTAGAGATAAAGGGTCAGGCATGGTGATTTGCACCTCTAGTCCAAGGCTCCCTCCTCGCTaGCTGTCACCAGCAGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: LAKSRDKGSGMVICTSSPRLPPR*LSPAAL Trigger: AAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCT...TGGACTAGAGGTGCAAATCACCATGCCTGACCCTTTATCTCTACTTTTGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS CCA 90 bp | AACCAGACCAGCAAGCTCAGGCCCCATTGTCTCTATGCATTCTCCTaGTCGGGAGGAGTTCCAGAGGGTGCCTGGTTTGGTTCAACATTT | + |
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Preference number: 5 (lower is better) Translates to: NQTSKLRPHCLYAFS*SGGVPEGAWFGSTF Trigger: AAATGTTGAACCAAACCAGGCACCCTCTGGAACTCCTCCCGACCAGGAGAATGCATAGAGACAATGGGGCCTGAGCTTGCTGGTCTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS-3UTR CAA 90 bp | CTTAAAACAACAGGAATTTATTCTCTCAGAGTGGTAGGGGCTGGAAGTCTGAATAGGCTCCCTCCTCGCTaGCTGTCACCAGCAGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: LKTTGIYSLRVVGAGSLNRLPPR*LSPAAL Trigger: AAGGGCTGCTGGTGACAGCAAGCGAGGAGGGAGCCT...ATTCAGACTTCCAGCCCCTACCACTCTGAGAGAATAAATTCCTGTTGTTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS TCA 90 bp | AGTTTGCCTTCTTCAGAGTTCATTTTCTTTGTACCAACGAAGCTTTaGAAGCCGCAGGCATCATGCCAGGAAGTGAAAGACAGTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: SLPSSEFIFFVPTKL*KPQASCQEVKDSFP Trigger: TGGGAAACTGTCTTTCACTTCCTGGCATGATGCCTGCGGCTTTCAAAGCTTCGTTGGTACAAAGAAAATGAACTCTGAAGAAGGCAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS CCA 90 bp | AGAGAAAGAAAGAAAAGGAGATTTATGAGCCTTAAAGCCACTAAGTaGTGTGTGGGCGGTACCTTCACCACTCCCATTTATCTCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: RERKKRRFMSLKATK*CVGGTFTTPIYLPS Trigger: TGATGGGAGATAAATGGGAGTGGTGAAGGTACCGCCCACACACCACTTAGTGGCTTTAAGGCTCATAAATCTCCTTTTCTTTCTTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS-3UTR CAA 90 bp | CAGTTTCTGGGAATGATACGATGTATTCCTTTCTTAAGGCGGCTGCAACAAAGCAGAGTGTTAACTGGATaGCTTCTGGCCAAAAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: QFLGMIRCIPFLRRLQQSRVLTG*LLAKSR Trigger: TCTACTTTTGGCCAGAAGCAATCCAGTTAACACTCT...GCTTTGTTGCAGCCGCCTTAAGAAAGGAATACATCGTATCATTCCCAGAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS-3UTR CAA 90 bp | CTGGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGGCTGTGTTTAGCTCCCACCTCTGGTaGAGAAACTTTTTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LVEKLFLLLLLPPHQAVFSSHLW*RNFFFF Trigger: GAAGAAGAAAAAGTTTCTCAACCAGAGGTGGGAGCT...AAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000569234.1 |
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| CDS CCA 90 bp | AAGCAAACATTTAGTAAGATAAACTTGCCATGCAGGAAGTGCCTCTaGTTGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: KQTFSKINLPCRKCL*LRNFFFFFFFLLIR Trigger: CCTGATGAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCAGAGGCACTTCCTGCATGGCAAGTTTATCTTACTAAATGTTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS TCA 72 bp | CCTGCACTCGGCACACGGTGCCGCCGCCGTGCAGGATaGGCGTCGACAGCCGACGCTTGGCCGGGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PALGTRCRRRAG*ASTADAWPGWA Trigger: GGCCCAGCCCGGCCAAGCGTCGGCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGTGTGCCGAGTGCAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300086.5 ENST00000653858.1 |
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| CDS GCA 72 bp | CCGGGCTCCTGCACTCGGCACACGGTGCCGCCGCCGTaGAGGATGAGCGTCGACAGCCGACGCTTGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: PGSCTRHTVPPP*RMSVDSRRLAG Trigger: CCCGGCCAAGCGTCGGCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGTGTGCCGAGTGCAGGAGCCCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300086.5 ENST00000653858.1 |
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| CDS TCA 72 bp | CCCTCGCGAGCGCCTGGCACACAGAGCTCAACTGACTaGGCTGTCACCGCAGACGCCTCTGCCGCGAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PSRAPGTQSSTD*AVTADASAAKR Trigger: GCGCTTCGCGGCAGAGGCGTCTGCGGTGACAGCTCAGTCAGTTGAGCTCTGTGTGCCAGGCGCTCGCGAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300086.5 |
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| CDS TCA 72 bp | TACCCCCTCGCGAGCGCCTGGCACACAGAGCTCAACTaGCTGAGCTGTCACCGCAGACGCCTCTGCCGCGAA | + |
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Preference number: 6 (lower is better) Translates to: YPLASAWHTELN*LSCHRRRLCRE Trigger: TTCGCGGCAGAGGCGTCTGCGGTGACAGCTCAGTCAGTTGAGCTCTGTGTGCCAGGCGCTCGCGAGGGGGTA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300086.5 |
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| CDS GCA 72 bp | TGGTTCCGGATGTCAACAGGGGGCGGGGCCAAGCGCTaGTACCGAAGATGCCAAGATGGACGCCAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: WFRMSTGGGAKR*YRRCQDGRQAA Trigger: GGCTGCCTGGCGTCCATCTTGGCATCTTCGGTAGCAGCGCTTGGCCCCGCCCCCTGTTGACATCCGGAACCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569234.1 |
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| CDS CCA 72 bp | GGGCGGGGCCAAGCGCTGCTACCGAAGATGCCAAGATaGACGCCAGGCAGCCAGGAGAAAGATCCCAACCCC | + |
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Preference number: 6 (lower is better) Translates to: GRGQALLPKMPR*TPGSQEKDPNP Trigger: GGGGTTGGGATCTTTCTCCTGGCTGCCTGGCGTCCATCTTGGCATCTTCGGTAGCAGCGCTTGGCCCCGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569234.1 |
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| CDS GCA 72 bp | TCAACAGGGGGCGGGGCCAAGCGCTGCTACCGAAGATaGCAAGATGGACGCCAGGCAGCCAGGAGAAAGATC | + |
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Preference number: 6 (lower is better) Translates to: STGGGAKRCYRR*QDGRQAARRKI Trigger: GATCTTTCTCCTGGCTGCCTGGCGTCCATCTTGGCATCTTCGGTAGCAGCGCTTGGCCCCGCCCCCTGTTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569234.1 |
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| CDS GCA 72 bp | AAACCAGACCAGCAAGCTCAGGCCCCATTGTCTCTATaGATTCTCCTGGTCGGGAGGAGTTCCAGAGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: KPDQQAQAPLSL*ILLVGRSSRGC Trigger: GCACCCTCTGGAACTCCTCCCGACCAGGAGAATGCATAGAGACAATGGGGCCTGAGCTTGCTGGTCTGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS CCA 72 bp | TCTCTACCAAAAATACAAAACATTAGCCCGATGCGGTaGCACATTCCTGTAGTTCCAGCTTCTCGGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLPKIQNISPMR*HIPVVPASREA Trigger: AGCCTCCCGAGAAGCTGGAACTACAGGAATGTGCCACCGCATCGGGCTAATGTTTTGTATTTTTGGTAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000564671.2 ENST00000653858.1 |
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| CDS CCA 72 bp | CTCCTGGTCGGGAGGAGTTCCAGAGGGTGCCTGGTTTaGTTCAACATTTGGTCATTAGAATTTCTAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLVGRSSRGCLV*FNIWSLEFLSK Trigger: TTTGCTTAGAAATTCTAATGACCAAATGTTGAACCAAACCAGGCACCCTCTGGAACTCCTCCCGACCAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS CAA 72 bp | TCTCCTGGTCGGGAGGAGTTCCAGAGGGTGCCTGGTTaGGTTCAACATTTGGTCATTAGAATTTCTAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SPGREEFQRVPG*VQHLVIRISKQ Trigger: TTGCTTAGAAATTCTAATGACCAAATGTTGAACCAAACCAGGCACCCTCTGGAACTCCTCCCGACCAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS GCA 72 bp | ATAGCTCTTCCAGATGACCGAGTCCAAACCAAGCCATaGCTCAAGGGTGATTCACATACAAACACAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: IALPDDRVQTKP*LKGDSHTNTNA Trigger: TGCATTTGTGTTTGTATGTGAATCACCCTTGAGGCATGGCTTGGTTTGGACTCGGTCATCTGGAAGAGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS CCA 72 bp | AAGAAAAGGAGATTTATGAGCCTTAAAGCCACTAAGTaGTGTGTGGGCGGTACCTTCACCACTCCCATTTAT | + |
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Preference number: 6 (lower is better) Translates to: KKRRFMSLKATK*CVGGTFTTPIY Trigger: ATAAATGGGAGTGGTGAAGGTACCGCCCACACACCACTTAGTGGCTTTAAGGCTCATAAATCTCCTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS CAA 72 bp | AGTAAGATAAACTTGCCATGCAGGAAGTGCCTCTGGTaGAGAAACTTTTTCTTCTTCTTCTTCTTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SKINLPCRKCLW*RNFFFFFFFLL Trigger: GAGGAGGAAGAAGAAGAAGAAGAAAAAGTTTCTCAACCAGAGGCACTTCCTGCATGGCAAGTTTATCTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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| CDS CAA 90 bp | CATTTGGTCATTAGAATTTCTAAGCAAACATTTAGTAAGATAAACTaGCCATGCAGGAAGTGCCTCTGGTTGAGAAACTTTTTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HLVIRISKQTFSKIN*PCRKCLWLRNFFFF Trigger: GAAGAAGAAAAAGTTTCTCAACCAGAGGCACTTCCTGCATGGCAAGTTTATCTTACTAAATGTTTGCTTAGAAATTCTAATGACCAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659145.1 |
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