RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TERF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132604

Ensembl transcript IDs: ENST00000254942.8, ENST00000564982.6, ENST00000566051.1, ENST00000566257.5, ENST00000566750.5, ENST00000567130.1, ENST00000567296.6, ENST00000567841.1, ENST00000569280.1, ENST00000569542.6, ENST00000569584.6, ENST00000569611.6

Found 381 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATaGCTACGTCGTCACTGGCCACTCCTGCGTCAAGTTCTAGCAGTC +
Preference number: 1 (lower is better)
Translates to: ARLGSPHAGLQNRQG*LRRHWPLLRQVLAV
Trigger: GACTGCTAGAACTTGACGCAGGAGTGGCCAGTGACGACGTAGCCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR TCA 90 bp CTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTCCATaGTCTCCAACAGTGATGAAGTGGAAATGGGACCTCCCCCACGTC +
Preference number: 1 (lower is better)
Translates to: LCQGHGWTWLCFLAP*SPTVMKWKWDLPHV
Trigger: GACGTGGGGGAGGTCCCATTTCCACTTCATCACTGTTGGAGATCATGGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR TCA 90 bp TTCCACAGGCCCTGGTGCTGGCTGTTTATCTTCCTTCCCTGTACTTaGGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCATCTGGGA +
Preference number: 1 (lower is better)
Translates to: FHRPWCWLFIFLPCT*GSGLRFQSLFGHLG
Trigger: TCCCAGATGGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAACAGCCAGCACCAGGGCCTGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR GCA 90 bp CACTTATCAGATGCCACAGCCCTTTGGGGCACCAAGTACAATGCATaGCAGACCACAGGTCCCCAAATAATACAACACAGAGCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: HLSDATALWGTKYNA*QTTGPQIIQHRAEA
Trigger: TGCCTCTGCTCTGTGTTGTATTATTTGGGGACCTGTGGTCTGGCATGCATTGTACTTGGTGCCCCAAAGGGCTGTGGCATCTGATAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR GCA 90 bp CAGATCCTTCTGGTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTaGACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTCATCATTCC +
Preference number: 1 (lower is better)
Translates to: QILLVQFCKGCLRIL*TRQSLESCFQSHHS
Trigger: GGAATGATGACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR CCA 90 bp AATCTGTGCCTGAGGATAAATCACTTATCAGATGCCACAGCCCTTTaGGGCACCAAGTACAATGCATGCCAGACCACAGGTCCCCAAATA +
Preference number: 1 (lower is better)
Translates to: NLCLRINHLSDATAL*GTKYNACQTTGPQI
Trigger: TATTTGGGGACCTGTGGTCTGGCATGCATTGTACTTGGTGCCCCAAAGGGCTGTGGCATCTGATAAGTGATTTATCCTCAGGCACAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR CCA 90 bp GTACTTGAGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCATCTaGGAAAGGAAGGATGTCATCAGGAAGAAGAGGCCACAGAATTGC +
Preference number: 1 (lower is better)
Translates to: VLEAADSDFKAFLAI*ERKDVIRKKRPQNC
Trigger: GCAATTCTGTGGCCTCTTCTTCCTGATGACATCCTTCCTTTCCCAGATGGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR TCA 90 bp GTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTaGAAGCTGCTTTCAGAGTCATCATTCCAATGGTGGTTGGAGGAT +
Preference number: 1 (lower is better)
Translates to: VLQRLPQNPVHQTES*KLLSESSFQWWLED
Trigger: ATCCTCCAACCACCATTGGAATGATGACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR TCA 90 bp CTCAGATGTTTGCTAAAAATGAAAGCAGCGATGAGTAGGAGGCTCTaGAACCTTTCCATTCCCACTCATGCCCTAGTGCAAGGCTTGGAA +
Preference number: 1 (lower is better)
Translates to: LRCLLKMKAAMSRRL*NLSIPTHALVQGLE
Trigger: TTCCAAGCCTTGCACTAGGGCATGAGTGGGAATGGAAAGGTTTCAGAGCCTCCTACTCATCGCTGCTTTCATTTTTAGCAAACATCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR TCA 90 bp GGAGAGACAGCAAGCACAACACAGTACAAAAGGAGAAGGGAATGTTaGATTCCAGTGCAAGACACGAACACAGCACAATTAGGGAATCAG +
Preference number: 1 (lower is better)
Translates to: GETASTTQYKRRREC*IPVQDTNTAQLGNQ
Trigger: CTGATTCCCTAATTGTGCTGTGTTCGTGTCTTGCACTGGAATTCAACATTCCCTTCTCCTTTTGTACTGTGTTGTGCTTGCTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR TCA 90 bp GCCCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTaGACTTGCCAAGTCTCAAATGCTCAGAAGGGTGCAAAATTATAC +
Preference number: 1 (lower is better)
Translates to: APQYLAGHGRLVSIH*TCQVSNAQKGAKLY
Trigger: GTATAATTTTGCACCCTTCTGAGCATTTGAGACTTGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR TCA 90 bp TGTCAGTGTAAATTCCGTTTTAATCATCTCCAGCACATTGATAGCTaGTTCCAGTGGTGTGAGCTCAGCCTCCATATCAAAGGAACAGTC +
Preference number: 1 (lower is better)
Translates to: CQCKFRFNHLQHIDS*FQWCELSLHIKGTV
Trigger: GACTGTTCCTTTGATATGGAGGCTGAGCTCACACCACTGGAATCAGCTATCAATGTGCTGGAGATGATTAAAACGGAATTTACACTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
3UTR TCA 90 bp TATATCATCACCTCACAGAGTGAGGATTGTAGTGACTCAGTAAGATaGTACATGAAAGTGCTCTGCCCCCAGAAAGCACTTCATCAACAA +
Preference number: 1 (lower is better)
Translates to: YIITSQSEDCSDSVR*YMKVLCPQKALHQQ
Trigger: TTGTTGATGAAGTGCTTTCTGGGGGCAGAGCACTTTCATGTATCATCTTACTGAGTCACTACAATCCTCACTCTGTGAGGTGATGATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR GCA 90 bp AATGACAGCAGCTTCCTTGACCAGTTTTCTACTGGATTCGACCACTaGTTCTGTCAGTGTAAATTCCGTTTTAATCATCTCCAGCACATT +
Preference number: 1 (lower is better)
Translates to: NDSSFLDQFSTGFDH*FCQCKFRFNHLQHI
Trigger: AATGTGCTGGAGATGATTAAAACGGAATTTACACTGACAGAAGCAGTGGTCGAATCCAGTAGAAAACTGGTCAAGGAAGCTGCTGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
3UTR CCA 90 bp AAATTAAAGTATTCTAGCCACTGCCCCACAGTACCTAGCAGGACATaGGAGATTAGTAAGTATTCACTGAACTTGCCAAGTCTCAAATGC +
Preference number: 1 (lower is better)
Translates to: KLKYSSHCPTVPSRT*EISKYSLNLPSLKC
Trigger: GCATTTGAGACTTGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGGGCAGTGGCTAGAATACTTTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR CCA 90 bp ATCTTCTGCTGGAAGGTCTCATATGAAAAGTTCTGGATAACAGGATaGGCCAAGTTCTTTTCTCGAATAATATTCAGGAGATCATTTCTC +
Preference number: 1 (lower is better)
Translates to: IFCWKVSYEKFWITG*AKFFSRIIFRRSFL
Trigger: GAGAAATGATCTCCTGAATATTATTCGAGAAAAGAACTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTTCCAGCAGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
3UTR GCA 90 bp ACATGGGAGATTAGTAAGTATTCACTGAACTTGCCAAGTCTCAAATaGTCAGAAGGGTGCAAAATTATACATATTCATCAGTCTCTTTTT +
Preference number: 1 (lower is better)
Translates to: TWEISKYSLNLPSLK*SEGCKIIHIHQSLF
Trigger: AAAAAGAGACTGATGAATATGTATAATTTTGCACCCTTCTGAGCATTTGAGACTTGGCAAGTTCAGTGAATACTTACTAATCTCCCATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGGCAGGCCAGTCTGCCTaGAGGGAGGATCCACCACAG +
Preference number: 2 (lower is better)
Translates to: NMHGAASTAQQLCPFASRAGQSA*REDPPQ
Trigger: CTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGC...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR TCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGCCAGCGCACCCAGCCTaGGGAAGGAGAATTGTAAGA +
Preference number: 2 (lower is better)
Translates to: NMHGAASTAQQLCPFASRPAHPA*GRRIVR
Trigger: TCTTACAATTCTCCTTCCTCAGGCTGGGTGCGCTGG...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAATGGCTACGTCGTCACTaGCCACTCCTGCGTCAAGTT +
Preference number: 2 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKWLRRH*PLLRQV
Trigger: AACTTGACGCAGGAGTGGCCAGTGACGACGTAGCCA...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR GCA 90 bp GCACAAGCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGGAAAGAAACAGCAGATaGCAGGCGCGGTGGCTCATG +
Preference number: 2 (lower is better)
Translates to: AQAVCLSSLPRTWVDLALERNSR*QARWLM
Trigger: CATGAGCCACCGCGCCTGGCATCTGCTGTTTCTTTC...CAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR-3UTR GCA 90 bp CAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAGGGAAGCTTCCATTCCCACTCATaGCCTAGTGCAAGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: QAGQSAWREDPPQDTKGSFHSHS*PSARLG
Trigger: TCCAAGCCTTGCACTAGGGCATGAGTGGGAATGGAA...GCTTCCCTTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR GCA 90 bp CAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAGGGAAGCAAGTATTCTAGCCACTaGCCCACAGTACCTAGCAGG +
Preference number: 2 (lower is better)
Translates to: QAGQSAWREDPPQDTKGSKYSSH*PTVPSR
Trigger: CCTGCTAGGTACTGTGGGGCAGTGGCTAGAATACTT...GCTTCCCTTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CCA 90 bp GAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCGCTGAGGCAGGAGAATaGCGTGAGCCCGGGAGACGG +
Preference number: 2 (lower is better)
Translates to: EVAQNSHPSPASERNSRCAEAGE*REPGRR
Trigger: CCGTCTCCCGGGCTCACGCCATTCTCCTGCCTCAGC...GCATCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR-3UTR CCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGGATGACGGTCCACTGTaGGGAATGAGAGGAAGCAAA +
Preference number: 2 (lower is better)
Translates to: NMHGAASTAQQLCPFASRDDGPL*GMRGSK
Trigger: TTTGCTTCCTCTCATTCCCCACAGTGGACCGTCATC...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR GCA 90 bp TGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTGAAAGAAACAGCAGATaGCAGGCGCGGTGGCTCATG +
Preference number: 2 (lower is better)
Translates to: CACHLCQGHGWTWLCFLAERNSR*QARWLM
Trigger: CATGAGCCACCGCGCCTGGCATCTGCTGTTTCTTTC...AGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR-3UTR GCA 90 bp AGATCCTTCTGGTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACGGAGGATTCCGTAGCTaGCTTGCGGGTTCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: RSFWSSFAKAASESCAPDGGFRS*LAGSLG
Trigger: ACCCAGAGAACCCGCAAGGCAGCTACGGAATCCTCC...GTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR-3UTR CCA 90 bp CCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAGGAGGCCGAGTTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: PRRRRLPKILIPAQLLKEGGRVG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCAACTCGGCCTCC...TTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR-3UTR CCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCCAGAACCGGCAGGGATaGCTACGTCGTCACTGGCCA +
Preference number: 2 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCQNRQG*LRRHWP
Trigger: TGGCCAGTGACGACGTAGCCATCCCTGCCGGTTCTG...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR GCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGTACATGAAAGTGCTCTaGCCCCAGAAAGCACTTCAT +
Preference number: 2 (lower is better)
Translates to: NMHGAASTAQQLCPFASRYMKVL*PQKALH
Trigger: ATGAAGTGCTTTCTGGGGGCAGAGCACTTTCATGTA...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR CAA 90 bp GCACAAGCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTaGGCTCTGCTTCTTAGCTCCATGATCTCCAACAGTGATGAAGTG +
Preference number: 2 (lower is better)
Translates to: AQAVCLSSLPRTWVD*ALLLSSMISNSDEV
Trigger: CACTTCATCACTGTTGGAGATCATGGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR CAA 90 bp TTTCCACAGGCCCTGGTGCTGGCTGTTTATCTTCCTTCCCTGTACTaGAGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCATCTGGG +
Preference number: 2 (lower is better)
Translates to: FPQALVLAVYLPSLY*RQRTQISKPFWPSG
Trigger: CCCAGATGGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAACAGCCAGCACCAGGGCCTGTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR-3UTR TCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGAGTGACTCAGTAAGATaGTACATGAAAGTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: NMHGAASTAQQLCPFASRSDSVR*YMKVLC
Trigger: GCAGAGCACTTTCATGTATCATCTTACTGAGTCACT...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR GCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCAGCTTGGAAGCCCACATaGGGGGCTTCAGAACCGGCA +
Preference number: 2 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPAWKPT*GASEPA
Trigger: TGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGC...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR GCA 90 bp CAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAGGGAAGCTTGCCAAGTCTCAAATaGTCAGAAGGGTGCAAAATT +
Preference number: 2 (lower is better)
Translates to: QAGQSAWREDPPQDTKGSLPSLK*SEGCKI
Trigger: AATTTTGCACCCTTCTGAGCATTTGAGACTTGGCAA...GCTTCCCTTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CCA 90 bp AAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGAGGAGGCCGAGTTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: KEVAQNSHPSPASERNSRGGRVG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCAACTCGGCCTCC...TCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR CAA 90 bp AACAGTGATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTaGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCA +
Preference number: 2 (lower is better)
Translates to: NSDEVEMGPPPRRRR*PKILIPAQLLKETA
Trigger: TGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTCATCACTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR-3UTR TCA 90 bp ATCCTTCTGGTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGTTCCTTCCCTGTACTTaGGGCAGCGGACTCAGATTT +
Preference number: 2 (lower is better)
Translates to: ILLVQFCKGCLRILCTRQFLPCT*GSGLRF
Trigger: AAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAA...CTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR-3UTR GCA 90 bp TCCTTCTGGTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGATTCCACAGGCCCTGGTaGTGGCTGTTTATCTTCCTT +
Preference number: 2 (lower is better)
Translates to: SFWSSFAKAASESCAPDRFHRPW*WLFIFL
Trigger: AAGGAAGATAAACAGCCAGCACCAGGGCCTGTGGAA...TCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR-3UTR GCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCACCAAGTACAATGCATaGCAGACCACAGGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCTKYNA*QTTGPQ
Trigger: TTGGGGACCTGTGGTCTGGCATGCATTGTACTTGGT...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CCA 90 bp GCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTCATCCTTTTCCACAGGCCCTaGTGCTGGCTGTTTATCTTC +
Preference number: 2 (lower is better)
Translates to: ASESCAPDRVLKAAFRVILFHRP*CWLFIF
Trigger: GAAGATAAACAGCCAGCACCAGGGCCTGTGGAAAAG...GATGACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR CAA 90 bp AAATCTGTGCCTGAGGATAAATCACTTATCAGATGCCACAGCCCTTaGGGGCACCAAGTACAATGCATGCCAGACCACAGGTCCCCAAAT +
Preference number: 2 (lower is better)
Translates to: KSVPEDKSLIRCHSP*GHQVQCMPDHRSPN
Trigger: ATTTGGGGACCTGTGGTCTGGCATGCATTGTACTTGGTGCCCCAAAGGGCTGTGGCATCTGATAAGTGATTTATCCTCAGGCACAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR TCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCACAAGTTCTAGCAGTCTaGGCAAGCCTTGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPQVLAV*ASLGGE
Trigger: CTCACCACCAAGGCTTGCTCAGACTGCTAGAACTTG...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CCA 90 bp TTCAACCACATGAGAAGTGGAGGATTAACCTGCCTACATAGCCCAGCAGATGTTGGACATGGGTGGACTTaGCTCTGCTTCTTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: FNHMRSGGLTCLHSPADVGHGWT*LCFLAP
Trigger: TGGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCC...AACATCTGCTGGGCTATGTAGGCAGGTTAATCCTCCACTTCTCATGTGGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR-3UTR CCA 90 bp GCTGCTTTCAGAGTCATCATTCCAATGGTGGTTGGAGGATTCCGTAGCTGCCTTGCCTTTTTGGCCATCTaGGAAAGGAAGGATGTCATC +
Preference number: 2 (lower is better)
Translates to: AAFRVIIPMVVGGFRSCLAFLAI*ERKDVI
Trigger: GATGACATCCTTCCTTTCCCAGATGGCCAAAAAGGC...AAGGCAGCTACGGAATCCTCCAACCACCATTGGAATGATGACTCTGAAAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR-3UTR CCA 90 bp TCATCATTCCAATGGTGGTTGGAGGATTCCGTAGCTGCCTTGCGGGTTCTCTGGATTTCAAAGCCTTTTTaGCCATCTGGGAAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SSFQWWLEDSVAALRVLWISKPF*PSGKGR
Trigger: CCTTCCTTTCCCAGATGGCCAAAAAGGCTTTGAAAT...CCAGAGAACCCGCAAGGCAGCTACGGAATCCTCCAACCACCATTGGAATGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR-3UTR CCA 90 bp TCCTTCTGGTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGAGTCATCATTCCAATaGTGGTTGGAGGATTCCGTA +
Preference number: 2 (lower is better)
Translates to: SFWSSFAKAASESCAPDRESSFQ*WLEDSV
Trigger: TACGGAATCCTCCAACCACCATTGGAATGATGACTC...TCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR CAA 90 bp AGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTaGAAAGCTGCTTTCAGAGTCATCATTCCAATGGTGGTTGGAGGA +
Preference number: 2 (lower is better)
Translates to: SFAKAASESCAPDRV*KAAFRVIIPMVVGG
Trigger: TCCTCCAACCACCATTGGAATGATGACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR-3UTR TCA 90 bp GTGTCCGGGAGAGACAGCAAGCACAACACAGTACAAAAGGAGAAGGGAATGTTGCAGAAGGCCAGAACTTaGCGTGGAACAAATTTACTC +
Preference number: 2 (lower is better)
Translates to: VSGRDSKHNTVQKEKGMLQKART*RGTNLL
Trigger: GAGTAAATTTGTTCCACGTCAAGTTCTGGCCTTCTG...CAACATTCCCTTCTCCTTTTGTACTGTGTTGTGCTTGCTGTCTCTCCCGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR-3UTR GCA 90 bp GGAGGATTAACCTGCCTACATAGCCCAGCAGATGTTGACAGCAAATGCCAAGGCCAGACTAAGTTCCTTTaGATTTGCATCAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: GGLTCLHSPADVDSKCQGQTKFL*ICIRRP
Trigger: TGGCCTTCTGATGCAAATGCAAAGGAACTTAGTCTG...GCCTTGGCATTTGCTGTCAACATCTGCTGGGCTATGTAGGCAGGTTAATCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR-3UTR CCA 90 bp ATGTTGAATTCCAGTGCAAGACACGAACACAGCACAATTAGGGAATCAGGAGGATCTCTGCCAAGGACATaGGTGGACTTGGCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: MLNSSARHEHSTIRESGGSLPRT*VDLALL
Trigger: AAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGA...TCCTCCTGATTCCCTAATTGTGCTGTGTTCGTGTCTTGCACTGGAATTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR-3UTR CCA 90 bp TCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAATCATCATTCCAATGGTaGTTGGAGGATTCCGTAGCT +
Preference number: 2 (lower is better)
Translates to: SSFAKAASESCAPDRVLKSSFQW*LEDSVA
Trigger: AGCTACGGAATCCTCCAACCACCATTGGAATGATGA...TTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR CAA 90 bp GGGAGAGACAGCAAGCACAACACAGTACAAAAGGAGAAGGGAATGTaGAATTCCAGTGCAAGACACGAACACAGCACAATTAGGGAATCA +
Preference number: 2 (lower is better)
Translates to: GRDSKHNTVQKEKGM*NSSARHEHSTIRES
Trigger: TGATTCCCTAATTGTGCTGTGTTCGTGTCTTGCACTGGAATTCAACATTCCCTTCTCCTTTTGTACTGTGTTGTGCTTGCTGTCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR-3UTR GCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGCATAGTGCAAATCTGTaGCTGAGGATAAATCACTTA +
Preference number: 2 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVHSANL*LRINHL
Trigger: TAAGTGATTTATCCTCAGGCACAGATTTGCACTATG...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CCA 90 bp CTTTGCATTTGCATCAGAAGGCCAGAACTTGACGTGGAACAAATTTACTCCAAAGTGATGAAGTGGAAATaGGACCTCCCCCACGTCGAA +
Preference number: 2 (lower is better)
Translates to: LCICIRRPELDVEQIYSKVMKWK*DLPHVE
Trigger: TTCGACGTGGGGGAGGTCCCATTTCCACTTCATCAC...TTTGGAGTAAATTTGTTCCACGTCAAGTTCTGGCCTTCTGATGCAAATGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR-3UTR TCA 90 bp AAGGTCTCATATGAAAAGTTCTGGATAACAGGATGGGCCAAGTTCTTTTCTCGACAGCACATTGATAGCTaGTTCCAGTGGTGTGAGCTC +
Preference number: 2 (lower is better)
Translates to: KVSYEKFWITGWAKFFSRQHIDS*FQWCEL
Trigger: GAGCTCACACCACTGGAATCAGCTATCAATGTGCTG...TCGAGAAAAGAACTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
3UTR-3UTR TCA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCATGAGTAGGAGGCTCTaGAACCTTTCCATTCCCACT +
Preference number: 2 (lower is better)
Translates to: RGSKSTVVETNNMFQRASMSRRL*NLSIPT
Trigger: AGTGGGAATGGAAAGGTTTCAGAGCCTCCTACTCAT...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CCA 90 bp ATCTTCTGCTGGAAGGTCTCATATGAAAAGTTCTGGATAACAGGATGGGCCAAGTCAGCTTCTGAGTTGTaGGGTCCTTGGACATATGTT +
Preference number: 2 (lower is better)
Translates to: IFCWKVSYEKFWITGWAKSASEL*GPWTYV
Trigger: AACATATGTCCAAGGACCCCACAACTCAGAAGCTGA...CTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTTCCAGCAGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
3UTR CAA 90 bp TTGCCAACCCCTGCTGCTTTAGGGGATTCATTAGACTTCATATCCTaGACATATGAGAGAGGGTGTATGTCTGAAACCTTCACAAATCCT +
Preference number: 2 (lower is better)
Translates to: LPTPAALGDSLDFIS*TYERGCMSETFTNP
Trigger: AGGATTTGTGAAGGTTTCAGACATACACCCTCTCTCATATGTCAAGGATATGAAGTCTAATGAATCCCCTAAAGCAGCAGGGGTTGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR GCA 90 bp TCTACAGATTACCAGGGATTTAAATTTAAGCAAACCACTAAAGAAGGGAAACGCACTGCACAAGCTGTGTaGCTGTCATCTCTGCCAAGG +
Preference number: 2 (lower is better)
Translates to: STDYQGFKFKQTTKEGKRTAQAV*LSSLPR
Trigger: CCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGT...GCGTTTCCCTTCTTTAGTGGTTTGCTTAAATTTAAATCCCTGGTAATCTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR-3UTR TCA 90 bp GATAACAGGATGGGCCAAGTTCTTTTCTCGAATAATATTCAGGAGATCATTTCTCTGATTCCAGTGGTGTaGGCTCAGCCTCCATATCAA +
Preference number: 2 (lower is better)
Translates to: DNRMGQVLFSNNIQEIISLIPVV*AQPPYQ
Trigger: TTGATATGGAGGCTGAGCTCACACCACTGGAATCAG...AGAAATGATCTCCTGAATATTATTCGAGAAAAGAACTTGGCCCATCCTGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
3UTR-3UTR GCA 90 bp AAGGTCTCATATGAAAAGTTCTGGATAACAGGATGGGCCAAGTTCTTTTCTCGAACTGGATTCGACCACTaGTTCTGTCAGTGTAAATTC +
Preference number: 2 (lower is better)
Translates to: KVSYEKFWITGWAKFFSRTGFDH*FCQCKF
Trigger: GAATTTACACTGACAGAAGCAGTGGTCGAATCCAGT...TCGAGAAAAGAACTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
3UTR-3UTR CCA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCGTACCTAGCAGGACATaGGAGATTAGTAAGTATTCA +
Preference number: 2 (lower is better)
Translates to: RGSKSTVVETNNMFQRASVPSRT*EISKYS
Trigger: TGAATACTTACTAATCTCCCATGTCCTGCTAGGTAC...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR CAA 90 bp ACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTaGCCAAGTCTCAAATGCTCAGAAGGGTGCAAAATTATACATATT +
Preference number: 2 (lower is better)
Translates to: TVPSRTWEISKYSLN*PSLKCSEGCKIIHI
Trigger: AATATGTATAATTTTGCACCCTTCTGAGCATTTGAGACTTGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CCA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCGGTCAAAGTATAATGTaGCCCAATGCAAACAAATTT +
Preference number: 2 (lower is better)
Translates to: RGSKSTVVETNNMFQRASGQSIM*PNANKF
Trigger: AAATTTGTTTGCATTGGGCCACATTATACTTTGACC...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR CCA 72 bp GGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATaGCTACGTCGTCACTGGCCACTCCTGCGTCAAGTT +
Preference number: 3 (lower is better)
Translates to: GSPHAGLQNRQG*LRRHWPLLRQV
Trigger: AACTTGACGCAGGAGTGGCCAGTGACGACGTAGCCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CAA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGCAGTCTGAGCAAGCCTaGGTGGTGAGTAACTTAGCT +
Preference number: 3 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWQSEQA*VVSNLA
Trigger: AGCTAAGTTACTCACCACCAAGGCTTGCTCAGACTG...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR CCA 72 bp ACAACATGTTCCAGAGAGCAAGCAGGCCAGTCTGCCTaGAGGGAGGATCCACCACAGGACACAAAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: TTCSREQAGQSA*REDPPQDTKGS
Trigger: GCTTCCCTTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTGGAACATGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CAA 90 bp GCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTCCACGTCGAAGGAGGTaGCCCAAAATTCTCATCCCA +
Preference number: 3 (lower is better)
Translates to: AVCLSSLPRTWVDLALLLPRRRR*PKILIP
Trigger: TGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG...AAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR-3UTR CAA 90 bp GCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTCATCGATTCCGTAGCTGCCTaGCGGGTTCTCTGGGTGGCT +
Preference number: 3 (lower is better)
Translates to: ASESCAPDRVLKAAFRVIDSVAA*RVLWVA
Trigger: AGCCACCCAGAGAACCCGCAAGGCAGCTACGGAATC...GATGACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR GCA 72 bp TGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTaGCAGCCGGTGACTCACTTCTACATACAAGTAGTG +
Preference number: 3 (lower is better)
Translates to: WSCIHCPAAMPI*QPVTHFYIQVV
Trigger: CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR GCA 72 bp ATTCTGGCACTGCACAAGCTGTGTGCCTGTCATCTCTaGCAAGGACATGGGTGGACTTGGCTCTGCTTCTTA +
Preference number: 3 (lower is better)
Translates to: ILALHKLCACHL*QGHGWTWLCFL
Trigger: TAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR-3UTR CAA 90 bp GTCTTTAAGGGTGTCCGGGAGAGACAGCAAGCACAACACAGTACAAAAGGAGAAAGGACATGGGTGGACTaGGCTCTGCTTCTTAGCTCC +
Preference number: 3 (lower is better)
Translates to: VFKGVRERQQAQHSTKGERTWVD*ALLLSS
Trigger: GGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCT...TTCTCCTTTTGTACTGTGTTGTGCTTGCTGTCTCTCCCGGACACCCTTAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR-3UTR CAA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAAAGACACTCAGATGTTaGCTAAAAATGAAAGCAGCG +
Preference number: 3 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKKTLRC*LKMKAA
Trigger: CGCTGCTTTCATTTTTAGCAAACATCTGAGTGTCTT...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CAA 90 bp GTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAACTTCCTTCCCTGTACTaGAGGCAGCGGACTCAGATT +
Preference number: 3 (lower is better)
Translates to: VQFCKGCLRILCTRQSLELPSLY*RQRTQI
Trigger: AATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAG...TTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR TCA 72 bp GGACATGGGTGGACTTGGCTCTGCTTCTTAGCTCCATaGTCTCCAACAGTGATGAAGTGGAAATGGGACCTC +
Preference number: 3 (lower is better)
Translates to: GHGWTWLCFLAP*SPTVMKWKWDL
Trigger: GAGGTCCCATTTCCACTTCATCACTGTTGGAGATCATGGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
3UTR GCA 72 bp GATGCCACAGCCCTTTGGGGCACCAAGTACAATGCATaGCAGACCACAGGTCCCCAAATAATACAACACAGA +
Preference number: 3 (lower is better)
Translates to: DATALWGTKYNA*QTTGPQIIQHR
Trigger: TCTGTGTTGTATTATTTGGGGACCTGTGGTCTGGCATGCATTGTACTTGGTGCCCCAAAGGGCTGTGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR-3UTR CAA 90 bp GTGTCCGGGAGAGACAGCAAGCACAACACAGTACAAAAGGAGAAGGGAATGTTGATAGCCCAGCAGATGTaGACAGCAAATGCCAAGGCA +
Preference number: 3 (lower is better)
Translates to: VSGRDSKHNTVQKEKGMLIAQQM*TANAKA
Trigger: TGCCTTGGCATTTGCTGTCAACATCTGCTGGGCTAT...CAACATTCCCTTCTCCTTTTGTACTGTGTTGTGCTTGCTGTCTCTCCCGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR GCA 72 bp CTGGTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTaGACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGT +
Preference number: 3 (lower is better)
Translates to: LVQFCKGCLRIL*TRQSLESCFQS
Trigger: ACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR TCA 72 bp GGACAAATGGGATTTGGACAAGCAATGATGAAGGGATaGCGGTCCACTGTGGGGAATGAGAGGAAGCAAAAG +
Preference number: 3 (lower is better)
Translates to: GQMGFGQAMMKG*RSTVGNERKQK
Trigger: CTTTTGCTTCCTCTCATTCCCCACAGTGGACCGTCATCCCTTCATCATTGCTTGTCCAAATCCCATTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR GCA 72 bp CACTGGTTCAACCACATGAGAAGTGGAGGATTAACCTaGCTACATAGCCCAGCAGATGTTGACAGCAAATGC +
Preference number: 3 (lower is better)
Translates to: HWFNHMRSGGLT*LHSPADVDSKC
Trigger: GCATTTGCTGTCAACATCTGCTGGGCTATGTAGGCAGGTTAATCCTCCACTTCTCATGTGGTTGAACCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR GCA 72 bp GAAGCCAATGAGATCCTGTATCAAATGAGAATAACATaGATGGAGCTGCATCCACTGCCCAGCAGCTATGCC +
Preference number: 3 (lower is better)
Translates to: EANEILYQMRIT*MELHPLPSSYA
Trigger: GGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTTATTCTCATTTGATACAGGATCTCATTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR GCA 72 bp CTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTaGTTTCAGAGTCATCATTCCAATGGTGGTTGGAGG +
Preference number: 3 (lower is better)
Translates to: LRILCTRQSLES*FQSHHSNGGWR
Trigger: CCTCCAACCACCATTGGAATGATGACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
3UTR-3UTR CAA 90 bp ACAGCAGCTTCCTTGACCAGTTTTCTACTGGATTCGACCACTGCTTCTGTCAGTATCATCTCCAGCACATaGATAGCTGATTCCAGTGGT +
Preference number: 3 (lower is better)
Translates to: TAASLTSFLLDSTTASVSIISST*IADSSG
Trigger: ACCACTGGAATCAGCTATCAATGTGCTGGAGATGAT...ACTGACAGAAGCAGTGGTCGAATCCAGTAGAAAACTGGTCAAGGAAGCTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
3UTR-3UTR CAA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGAAGTATTCACTGAACTaGCCAAGTCTCAAATGCTCA +
Preference number: 3 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVKYSLN*PSLKCS
Trigger: TGAGCATTTGAGACTTGGCAAGTTCAGTGAATACTT...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR GCA 72 bp TGCAAATCTGTGCCTGAGGATAAATCACTTATCAGATaGCACAGCCCTTTGGGGCACCAAGTACAATGCATG +
Preference number: 3 (lower is better)
Translates to: CKSVPEDKSLIR*HSPLGHQVQCM
Trigger: CATGCATTGTACTTGGTGCCCCAAAGGGCTGTGGCATCTGATAAGTGATTTATCCTCAGGCACAGATTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR TCA 72 bp TTGCTAAAAATGAAAGCAGCGATGAGTAGGAGGCTCTaGAACCTTTCCATTCCCACTCATGCCCTAGTGCAA +
Preference number: 3 (lower is better)
Translates to: LLKMKAAMSRRL*NLSIPTHALVQ
Trigger: TTGCACTAGGGCATGAGTGGGAATGGAAAGGTTTCAGAGCCTCCTACTCATCGCTGCTTTCATTTTTAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR TCA 72 bp ACCTCACAGAGTGAGGATTGTAGTGACTCAGTAAGATaGTACATGAAAGTGCTCTGCCCCCAGAAAGCACTT +
Preference number: 3 (lower is better)
Translates to: TSQSEDCSDSVR*YMKVLCPQKAL
Trigger: AAGTGCTTTCTGGGGGCAGAGCACTTTCATGTATCATCTTACTGAGTCACTACAATCCTCACTCTGTGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR GCA 72 bp TCACAATGGGGAGCAAAATTAAAGTATTCTAGCCACTaGCCCACAGTACCTAGCAGGACATGGGAGATTAGT +
Preference number: 3 (lower is better)
Translates to: SQWGAKLKYSSH*PTVPSRTWEIS
Trigger: ACTAATCTCCCATGTCCTGCTAGGTACTGTGGGGCAGTGGCTAGAATACTTTAATTTTGCTCCCCATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR CCA 72 bp TATTCTAGCCACTGCCCCACAGTACCTAGCAGGACATaGGAGATTAGTAAGTATTCACTGAACTTGCCAAGT +
Preference number: 3 (lower is better)
Translates to: YSSHCPTVPSRT*EISKYSLNLPS
Trigger: ACTTGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGGGCAGTGGCTAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
3UTR TCA 72 bp GCAAGCACAACACAGTACAAAAGGAGAAGGGAATGTTaGATTCCAGTGCAAGACACGAACACAGCACAATTA +
Preference number: 3 (lower is better)
Translates to: ASTTQYKRRREC*IPVQDTNTAQL
Trigger: TAATTGTGCTGTGTTCGTGTCTTGCACTGGAATTCAACATTCCCTTCTCCTTTTGTACTGTGTTGTGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR GCA 72 bp AGCTTCCTTGACCAGTTTTCTACTGGATTCGACCACTaGTTCTGTCAGTGTAAATTCCGTTTTAATCATCTC +
Preference number: 3 (lower is better)
Translates to: SFLDQFSTGFDH*FCQCKFRFNHL
Trigger: GAGATGATTAAAACGGAATTTACACTGACAGAAGCAGTGGTCGAATCCAGTAGAAAACTGGTCAAGGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
3UTR CCA 72 bp TGGAAGGTCTCATATGAAAAGTTCTGGATAACAGGATaGGCCAAGTTCTTTTCTCGAATAATATTCAGGAGA +
Preference number: 3 (lower is better)
Translates to: WKVSYEKFWITG*AKFFSRIIFRR
Trigger: TCTCCTGAATATTATTCGAGAAAAGAACTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR TCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAACTTGGATGGTGGCGCTaGAGCGGCCTCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKLGWWR*SGLLGG
Trigger: TCCTCCCAGGAGGCCGCTTCAGCGCCACCATCCAAG...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp TCCATGATCTCCAACAGTGATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGCAGCTGCCCGCCCGCTaGCGTCGCTACTCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SMISNSDEVEMGPPPRRRQLPAR*RRYSRL
Trigger: GAGGCGGGAGTAGCGACGGCAGCGGGCGGGCAGCTG...CCTTCGACGTGGGGGAGGTCCCATTTCCACTTCATCACTGTTGGAGATCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGGCTGAAGCGGCCTCCTaGGAGGAGTTGAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: NMHGAASTAQQLCPFASRAEAAS*EELRPA
Trigger: CGCAGGCCTCAACTCCTCCCAGGAGGCCGCTTCAGC...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGGCAAGCAGGCCAGTCTaGCTGGAGGGAGGATCCACC +
Preference number: 4 (lower is better)
Translates to: NMHGAASTAQQLCPFASRASRPV*LEGGST
Trigger: GGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGC...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAATCGGCGTCATCCAGGTaGCTCTCCAGGAAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKSASSR*LSRKRS
Trigger: GCTGCGCTTCCTGGAGAGCCACCTGGATGACGCCGA...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp GTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCACTTGGATGGTGGCGCTaGAGCGGCCTCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VEMGPPPRRRRLPKILIPLGWWR*SGLLGG
Trigger: TCCTCCCAGGAGGCCGCTTCAGCGCCACCATCCAAG...TGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAACAGGGAGGGGTTGGTTaGGAACGGTGGGCTTGGATG +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKQGGVG*ERWAWM
Trigger: CATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTG...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAGCTTGGAAGCCCACATaGGGGGCTTCAGAACCGGCA +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKAWKPT*GASEPA
Trigger: TGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGC...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGGCAGCTATGCCCATTTaGCAGCCGGTGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWAAMPI*QPVTHF
Trigger: GAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGC...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGGCCTTGCGGGTTCTCTaGGTGGCTTTTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: NMHGAASTAQQLCPFASRALRVL*VAFPQA
Trigger: GGCCTGTGGAAAAGCCACCCAGAGAACCCGCAAGGC...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp ATGATATTCTGGCACTGCACAAGCTGTGTGCCTGTCATCTCTGCCAAGGACATGCCGCTTCCTCGGCTGTaGCGCCGCTGGGTCACGCAC +
Preference number: 4 (lower is better)
Translates to: MIFWHCTSCVPVISAKDMPLPRL*RRWVTH
Trigger: GTGCGTGACCCAGCGGCGTCACAGCCGAGGAAGCGG...CATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAATATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGCCTCCTGGGAGGAGTTaGGGCCTGCGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVPPGRS*GLRWAQ
Trigger: CTGAGCCCAGCGCAGGCCTCAACTCCTCCCAGGAGG...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAAAACAGGCAGTAGGCTaGTTTGGCCCCAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKKQAVG*FGPRAT
Trigger: TGTGGCCCTGGGGCCAAATCAGCCTACTGCCTGTTT...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAATCTCCAGGGAGGGGTTaGTTGAGAACGGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKSPGRG*LRTVGL
Trigger: CAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGA...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp TGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTGCTGAGGCAGGAGAATaGCGTGAGCCCGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: CACHLCQGHGWTWLCFLAAEAGE*REPGRR
Trigger: CCGTCTCCCGGGCTCACGCCATTCTCCTGCCTCAGC...AGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGGCAGTGGTGCAATCTTaGCTCACTGTGCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: NMHGAASTAQQLCPFASRAVVQS*LTVQPP
Trigger: CGGAGGCTGCACAGTGAGCCAAGATTGCACCACTGC...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGTTCCTTCCCTGTACTTaGGGCAGCGGACTCAGATTT +
Preference number: 4 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWFLPCT*GSGLRF
Trigger: AAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAA...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGTGCACAGGATTGCTGTaGGAAGCCAATGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWCTGLL*EANEIL
Trigger: CAGGATCTCATTGGCTTCTCACAGCAATCCTGTGCA...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGCAGTTTTGCAAAGGCTaGCTCAGAATCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWQFCKG*LRILCT
Trigger: GGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTG...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAATTGCCCAGCCTGGAGTaGAGTGGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKLPSLE*SGAILA
Trigger: AGCCAAGATTGCACCACTGCACTCCAGGCTGGGCAA...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp GTGATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCGGCGTCATCCAGGTaGCTCTCCAGGAAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VMKWKWDLPHVEGGCPKFSASSR*LSRKRS
Trigger: GCTGCGCTTCCTGGAGAGCCACCTGGATGACGCCGA...GAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp CCAACAGTGATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAGGAGGCCGAGTTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PTVMKWKWDLPHVEGGCPGGRVG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCAACTCGGCCTCC...TGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTCATCACTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp GGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTGTGATGAAGTGGAAATaGGACCTCCCCCACGTCGAA +
Preference number: 4 (lower is better)
Translates to: GTSPTSKEVAQNSHPSPAVMKWK*DLPHVE
Trigger: TTCGACGTGGGGGAGGTCCCATTTCCACTTCATCAC...AGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp GGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTCTGCCAAGGACATaGGTGGACTTGGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GTSPTSKEVAQNSHPSPASLPRT*VDLALL
Trigger: AAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGA...AGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGTGGCTACGTCGTCACTaGCCACTCCTGCGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: NMHGAASTAQQLCPFASRWLRRH*PLLRQV
Trigger: AACTTGACGCAGGAGTGGCCAGTGACGACGTAGCCA...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp GTCTTTAAGGGTGTCCGGGAGAGACAGCAAGCACAACACAGTACAAAAGGAGAACCTCCTGGGAGGAGTTaGGGCCTGCGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VFKGVRERQQAQHSTKGEPPGRS*GLRWAQ
Trigger: CTGAGCCCAGCGCAGGCCTCAACTCCTCCCAGGAGG...TTCTCCTTTTGTACTGTGTTGTGCTTGCTGTCTCTCCCGGACACCCTTAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGCAAGTTCTAGCAGTCTaGGCAAGCCTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: NMHGAASTAQQLCPFASRQVLAV*ASLGGE
Trigger: CTCACCACCAAGGCTTGCTCAGACTGCTAGAACTTG...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGTGCCTCAGAATCCTGTaGACCAGACAGAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWCLRIL*TRQSLE
Trigger: TTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCA...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp GGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTACTGCACAAGCTGTGTaGCTGTCATCTCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GPPPRRRRLPKILIPAQLTAQAV*LSSLPR
Trigger: CCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGT...AAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp GGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTTCGGCGTCATCCAGGTaGCTCTCCAGGAAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GCLRILCTRQSLESCFQSSASSR*LSRKRS
Trigger: GCTGCGCTTCCTGGAGAGCCACCTGGATGACGCCGA...ACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp GAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCGCTGAAGCGGCCTCCTaGGAGGAGTTGAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: EVAQNSHPSPASERNSRCAEAAS*EELRPA
Trigger: CGCAGGCCTCAACTCCTCCCAGGAGGCCGCTTCAGC...GCATCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp GCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTTCTCCAGGGAGGGGTTaGTTGAGAACGGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: AVCLSSLPRTWVDLALLLSPGRG*LRTVGL
Trigger: CAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGA...AAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp GGAGGATTAACCTGCCTACATAGCCCAGCAGATGTTGACAGCAAATGCCAAGGCTGTCCCGGATCTGTCTaGAGTCCCCGTACCGGCTAC +
Preference number: 4 (lower is better)
Translates to: GGLTCLHSPADVDSKCQGCPGSV*SPRTGY
Trigger: GTAGCCGGTACGGGGACTTCAGACAGATCCGGGACA...GCCTTGGCATTTGCTGTCAACATCTGCTGGGCTATGTAGGCAGGTTAATCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp GGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGATTCCAGTGGTGTaGGCTCAGCCTCCATATCAA +
Preference number: 4 (lower is better)
Translates to: GPPPRRRRLPKILIPAQLLIPVV*AQPPYQ
Trigger: TTGATATGGAGGCTGAGCTCACACCACTGGAATCAG...AAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp ATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCACACCCAGCGATTGACTaGCTCTTCCAGCCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: MKWKWDLPHVEGGCPKFSHPAID*LFQPCL
Trigger: GAGGCACGGCTGGAAGAGGCAGTCAATCGCTGGGTG...TGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAAAGTATTCTAGCCACTaGCCCACAGTACCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKKYSSH*PTVPSR
Trigger: CCTGCTAGGTACTGTGGGGCAGTGGCTAGAATACTT...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp TGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTGGAGGCCGAGTTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: CACHLCQGHGWTWLCFLAGGRVG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCAACTCGGCCTCC...AGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp GTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCGTAATCCCAGCACTTTaGGAGGCCGAGTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VCLSSLPRTWVDLALLLSVIPAL*EAELGG
Trigger: TCCACCCAACTCGGCCTCCCAAAGTGCTGGGATTAC...GCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGGAAGGTCTTCATACTTaGGATTCTTCTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWEGLHT*DSSLQG
Trigger: TCCCTGGAGAGAAGAATCCCAAGTATGAAGACCTTC...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGCAGAACCGGCAGGGATaGCTACGTCGTCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVQNRQG*LRRHWP
Trigger: TGGCCAGTGACGACGTAGCCATCCCTGCCGGTTCTG...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCGCAGGCCAGTCTGCCTaGAGGGAGGATCCACCACAG +
Preference number: 4 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCAGQSA*REDPPQ
Trigger: CTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGC...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAGGGAGATCCATAAGGTaGATCACTAGTGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKGRSIR*ITSGDQ
Trigger: CTGGTCACCACTAGTGATCCACCTTATGGATCTCCC...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp GCACAAGCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGACCGTCAGCCGGGGCTaGACTTTCGTTTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: AQAVCLSSLPRTWVDLALTVSRG*TFVFIF
Trigger: AAAGATGAAAACGAAAGTTCAGCCCCGGCTGACGGT...CAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp AGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCCCAGGGAGGGGTTGGTTaGGAACGGTGGGCTTGGATG +
Preference number: 4 (lower is better)
Translates to: RLPKILIPAQLLKETADAQGGVG*ERWAWM
Trigger: CATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTG...GGCATCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAGAGAGGGTGTATGTCTaGAACCTTCACAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKERVYV*NLHKSS
Trigger: GGAGGATTTGTGAAGGTTTCAGACATACACCCTCTC...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp ACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAATCGGGACACGGTGTaGTCCTTCCCCAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TSKEVAQNSHPSPASERNNRDTV*SFPKGL
Trigger: CAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATT...GTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp CCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAGGAGGATTCCGTAGCTaGCTTGCGGGTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRRRRLPKILIPAQLLKEGGFRS*LAGSLG
Trigger: ACCCAGAGAACCCGCAAGGCAGCTACGGAATCCTCC...TTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp ATGATATTCTGGCACTGCACAAGCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGAGGAGTTGAGGCCTaGGCTGGGCTCAGTACTCTG +
Preference number: 4 (lower is better)
Translates to: MIFWHCTSCVPVISAKDMGGVEA*AGLSTL
Trigger: CAGAGTACTGAGCCCAGCGCAGGCCTCAACTCCTCC...CATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAATATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCGGAGGAGTTGAGGCCTaGGCTGGGCTCAGTACTCTG +
Preference number: 4 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCGGVEA*AGLSTL
Trigger: CAGAGTACTGAGCCCAGCGCAGGCCTCAACTCCTCC...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp GGCTGTTTATCTTCCTTCCCTGTACTTGAGGCAGCGGACTCAGATTTCAAAGCCGCCTTGCGGGTTCTCTaGGTGGCTTTTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GCLSSFPVLEAADSDFKAALRVL*VAFPQA
Trigger: GGCCTGTGGAAAAGCCACCCAGAGAACCCGCAAGGC...GGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp GGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCATCATTCCAATGGTaGTTGGAGGATTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: GTSPTSKEVAQNSHPSPASSFQW*LEDSVA
Trigger: AGCTACGGAATCCTCCAACCACCATTGGAATGATGA...AGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp GCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTTCTCTGCCAAGGACATaGGTGGACTTGGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: AVCLSSLPRTWVDLALLLSLPRT*VDLALL
Trigger: AAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGA...AAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp GGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTTATTCCACAAGGACTaGTCTGTCATCAACCTGGGT +
Preference number: 4 (lower is better)
Translates to: GTSPTSKEVAQNSHPSPALFHKD*SVINLG
Trigger: ACCCAGGTTGATGACAGACCAGTCCTTGTGGAATAA...AGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR CAA 72 bp GAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTaGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: EVEMGPPPRRRR*PKILIPAQLLK
Trigger: TTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR TCA 90 bp TCATTCCAATGGTGGTTGGAGGATTCCGTAGCTGCCTTGCGGGTTCTCTGGGTGTTCCTTCCCTGTACTTaGGGCAGCGGACTCAGATTT +
Preference number: 4 (lower is better)
Translates to: SFQWWLEDSVAALRVLWVFLPCT*GSGLRF
Trigger: AAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAA...CACCCAGAGAACCCGCAAGGCAGCTACGGAATCCTCCAACCACCATTGGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR TCA 90 bp GTGATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTGGGTCTCTTGTTTTTaGGGGCTGGTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VMKWKWDLPHVEGGCPKFWVSCF*GLVMLG
Trigger: TCCCAGCATCACCAGCCCTCAAAAACAAGAGACCCA...GAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGCCAGCGCACCCAGCCTaGGGAAGGAGAATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVPAHPA*GRRIVR
Trigger: TCTTACAATTCTCCTTCCTCAGGCTGGGTGCGCTGG...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAAAGCGCAGCATCTTCTaGTGGAAGGTCTCATATGAA +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKKRSIF*WKVSYE
Trigger: TTCATATGAGACCTTCCAGCAGAAGATGCTGCGCTT...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp TCTTCCTTCCCTGTACTTGAGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCGGAGGATTCCGTAGCTaGCTTGCGGGTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSFPVLEAADSDFKAFLAGGFRS*LAGSLG
Trigger: ACCCAGAGAACCCGCAAGGCAGCTACGGAATCCTCC...GGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR GCA 90 bp CCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAGAAAGAAACAGCAGATaGCAGGCGCGGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: PRRRRLPKILIPAQLLKEERNSR*QARWLM
Trigger: CATGAGCCACCGCGCCTGGCATCTGCTGTTTCTTTC...TTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR GCA 90 bp TCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAACACGTCGAAGGAGGTTaGCCAAAATTCTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: SPTSKEVAQNSHPSPASEHVEGG*PKFSSQ
Trigger: CTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTG...TTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR GCA 90 bp CCAACAGTGATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAATGATATTCTGGCACTaGACAAGCTGTGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PTVMKWKWDLPHVEGGCPMIFWH*TSCVPV
Trigger: GACAGGCACACAGCTTGTGCAGTGCCAGAATATCAT...TGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTCATCACTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGCGCAGCATCTTCTGCTaGAAGGTCTCATATGAAAAG +
Preference number: 4 (lower is better)
Translates to: NMHGAASTAQQLCPFASRRSIFC*KVSYEK
Trigger: CTTTTCATATGAGACCTTCCAGCAGAAGATGCTGCG...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp TCCAGTGCAAGACACGAACACAGCACAATTAGGGAATCAGGAGGAAGCAACCATGCCTTGCGGGTTCTCTaGGTGGCTTTTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SSARHEHSTIRESGGSNHALRVL*VAFPQA
Trigger: GGCCTGTGGAAAAGCCACCCAGAGAACCCGCAAGGC...ATGGTTGCTTCCTCCTGATTCCCTAATTGTGCTGTGTTCGTGTCTTGCACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp AACATGCATGGAGCTGCATCCACTGCCCAGCAGCTATGCCCATTTGCCAGCCGGGAGTCATCATTCCAATaGTGGTTGGAGGATTCCGTA +
Preference number: 4 (lower is better)
Translates to: NMHGAASTAQQLCPFASRESSFQ*WLEDSV
Trigger: TACGGAATCCTCCAACCACCATTGGAATGATGACTC...CCGGCTGGCAAATGGGCATAGCTGCTGGGCAGTGGATGCAGCTCCATGCATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp CTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGTGATGAAGTGGAAATaGGACCTCCCCCACGTCGAA +
Preference number: 4 (lower is better)
Translates to: LCACHLCQGHGWTWLCFLVMKWK*DLPHVE
Trigger: TTCGACGTGGGGGAGGTCCCATTTCCACTTCATCAC...TAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp GCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTTGCCAAGGACATGGGTaGACTTGGCTCTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: AVCLSSLPRTWVDLALLLCQGHG*TWLCFL
Trigger: TAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCA...AAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp TCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAATGCCAAGGACATGGGTaGACTTGGCTCTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: SPTSKEVAQNSHPSPASECQGHG*TWLCFL
Trigger: TAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCA...TTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGCTGTCAAGACTGACTTaGATTAAAAATCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWLSRLT*IKNPKP
Trigger: GGGCTTTGGATTTTTAATCCAAGTCAGTCTTGACAG...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAACTGGAAGGTCTCATATaGAAAGTTCTGGATAACAGG +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKLEGLI*KVLDNR
Trigger: CCTGTTATCCAGAACTTTTCATATGAGACCTTCCAG...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTATTCCACAGGCCCTGGTaGTGGCTGTTTATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LCACHLCQGHGWTWLCFLFHRPW*WLFIFL
Trigger: AAGGAAGATAAACAGCCAGCACCAGGGCCTGTGGAA...TAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp GCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTCTTCTGGTCCAGTTTTaGAAAGGCTGCCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: AVCLSSLPRTWVDLALLLLLVQF*KGCLRI
Trigger: GATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAG...AAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp ATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCACCTTCCCCATATTTCTaGACTCCAGCCTTGACCCAC +
Preference number: 4 (lower is better)
Translates to: MKWKWDLPHVEGGCPKFSPSPYF*TPALTH
Trigger: GTGGGTCAAGGCTGGAGTGCAGAAATATGGGGAAGG...TGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR GCA 90 bp TCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCGAAAGAAACAGCAGATaGCAGGCGCGGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: SKEVAQNSHPSPASERNSERNSR*QARWLM
Trigger: CATGAGCCACCGCGCCTGGCATCTGCTGTTTCTTTC...GCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR GCA 90 bp TCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTCCATGATCTGTGCCTGTCATCTCTaGCAAGGACATGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: SSLPRTWVDLALLLSSMICACHL*QGHGWT
Trigger: AGTCCACCCATGTCCTTGGCAGAGATGACAGGCACA...GATCATGGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR GCA 90 bp CCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAATGTGCCTGTCATCTCTaGCAAGGACATGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: PRRRRLPKILIPAQLLKECACHL*QGHGWT
Trigger: AGTCCACCCATGTCCTTGGCAGAGATGACAGGCACA...TTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp GTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAACACAGGCCCTGGTGCTaGCTGTTTATCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VQFCKGCLRILCTRQSLEHRPWC*LFIFLP
Trigger: GGGAAGGAAGATAAACAGCCAGCACCAGGGCCTGTG...TTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp TCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCTCATGCGCTTGTTCTTaGGCTGCAGTTCCGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SKEVAQNSHPSPASERNSSCACS*AAVPSH
Trigger: GTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGA...GCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp GTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTGCCTTTGGGTACTTTaGGATTCTTCTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VCLSSLPRTWVDLALLLSCLWVL*DSSLQG
Trigger: TCCCTGGAGAGAAGAATCCCAAAGTACCCAAAGGCA...GCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGGATGCCACAGCCCTTTaGGGCACCAAGTACAATGCA +
Preference number: 4 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVDATAL*GTKYNA
Trigger: TGCATTGTACTTGGTGCCCCAAAGGGCTGTGGCATC...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCGATGCTGGGAGAGCTTaGGTAGGAAGAACCAGATCC +
Preference number: 4 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCDAGRA*VGRTRS
Trigger: GGATCTGGTTCTTCCTACTCAAGCTCTCCCAGCATC...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp TCCATGATCTCCAACAGTGATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGAGAAGGGAATGTTaGATTCCAGTGCAAGACACG +
Preference number: 4 (lower is better)
Translates to: SMISNSDEVEMGPPPRRRRRREC*IPVQDT
Trigger: CGTGTCTTGCACTGGAATTCAACATTCCCTTCTCCT...CCTTCGACGTGGGGGAGGTCCCATTTCCACTTCATCACTGTTGGAGATCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGGTCCACTGTGGGGAATaGGAGGAAGCAAAAGTACAG +
Preference number: 4 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVVHCGE*EEAKVQ
Trigger: CTGTACTTTTGCTTCCTCTCATTCCCCACAGTGGAC...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp AATAATGACAGCAGCTTCCTTGACCAGTTTTCTACTGGATTCGACCACTGCTTCAATCGGGACACGGTGTaGTCCTTCCCCAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NNDSSFLDQFSTGFDHCFNRDTV*SFPKGL
Trigger: CAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATT...GAAGCAGTGGTCGAATCCAGTAGAAAACTGGTCAAGGAAGCTGCTGTCATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR GCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCAGGAGGATTCCGTAGCTaGCTTGCGGGTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPGGFRS*LAGSLG
Trigger: ACCCAGAGAACCCGCAAGGCAGCTACGGAATCCTCC...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTATGCCTCAGAATCCTGTaGACCAGACAGAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LCACHLCQGHGWTWLCFLCLRIL*TRQSLE
Trigger: TTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCA...TAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCATCATTCCAATGGTGGTTGGAGGATTCCGTAGCTGCCTTGCGGGTTCTCTGGTGCCTCAGAATCCTGTaGACCAGACAGAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SSFQWWLEDSVAALRVLWCLRIL*TRQSLE
Trigger: TTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCA...CCAGAGAACCCGCAAGGCAGCTACGGAATCCTCCAACCACCATTGGAATGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR GCA 90 bp GTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGTCTTCATCTGGTGCTaGCTGAACTTGAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: VEMGPPPRRRRLPKILIPVFIWC*LNLKQF
Trigger: GAACTGTTTCAAGTTCAGGCAGCACCAGATGAAGAC...TGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp AGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCCCCTTCCCCATATTTCTaGACTCCAGCCTTGACCCAC +
Preference number: 4 (lower is better)
Translates to: RLPKILIPAQLLKETADAPSPYF*TPALTH
Trigger: GTGGGTCAAGGCTGGAGTGCAGAAATATGGGGAAGG...GGCATCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp AGCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTCAGCTTCTGAGTTGTaGGGTCCTTGGACATATGTT +
Preference number: 4 (lower is better)
Translates to: SCVPVISAKDMGGLGSASSASEL*GPWTYV
Trigger: AACATATGTCCAAGGACCCCACAACTCAGAAGCTGA...AGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp CCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAACTTTTCCACAGGCCCTaGTGCTGGCTGTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: PRRRRLPKILIPAQLLKELFHRP*CWLFIF
Trigger: GAAGATAAACAGCCAGCACCAGGGCCTGTGGAAAAG...TTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGCTTTTCCACAGGCCCTaGTGCTGGCTGTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVLFHRP*CWLFIF
Trigger: GAAGATAAACAGCCAGCACCAGGGCCTGTGGAAAAG...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCACTGGGCTCAGTACTCTaGCTGTCCTCCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPLGSVL*LSSSKT
Trigger: GGTCTTGGAGGAGGACAGCCAGAGTACTGAGCCCAG...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp AGGGAAACGCTAATGATATTCTGGCACTGCACAAGCTGTGTGCCTGTCATCTCTGTAATCCCAGCACTTTaGGAGGCCGAGTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RETLMIFWHCTSCVPVISVIPAL*EAELGG
Trigger: TCCACCCAACTCGGCCTCCCAAAGTGCTGGGATTAC...AGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAATATCATTAGCGTTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp AGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCCGGACATGGGTGGACTTaGCTCTGCTTCTTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLPKILIPAQLLKETADAGHGWT*LCFLAP
Trigger: TGGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCC...GGCATCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp AGCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTCATGGAGTCACAAGTaGCTCCTAATAGACTTCACC +
Preference number: 4 (lower is better)
Translates to: SCVPVISAKDMGGLGSASSWSHK*LLIDFT
Trigger: GGTGAAGTCTATTAGGAGCCACTTGTGACTCCATGA...AGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR CAA 72 bp CCTGAGGATAAATCACTTATCAGATGCCACAGCCCTTaGGGGCACCAAGTACAATGCATGCCAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: PEDKSLIRCHSP*GHQVQCMPDHR
Trigger: CCTGTGGTCTGGCATGCATTGTACTTGGTGCCCCAAAGGGCTGTGGCATCTGATAAGTGATTTATCCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCACCGTCAGCCGGGGCTaGACTTTCGTTTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCTVSRG*TFVFIF
Trigger: AAAGATGAAAACGAAAGTTCAGCCCCGGCTGACGGT...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp AAGGTCTCATATGAAAAGTTCTGGATAACAGGATGGGCCAAGTTCTTTTCTCGACCTTCCCCAAGGGCCTaGCAAGCAAAGCGGCTACCC +
Preference number: 4 (lower is better)
Translates to: KVSYEKFWITGWAKFFSRPSPRA*QAKRLP
Trigger: GGGTAGCCGCTTTGCTTGTCAGGCCCTTGGGGAAGG...TCGAGAAAAGAACTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR TCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGATGAGTAGGAGGCTCTaGAACCTTTCCATTCCCACT +
Preference number: 4 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVMSRRL*NLSIPT
Trigger: AGTGGGAATGGAAAGGTTTCAGAGCCTCCTACTCAT...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp GTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAACAGTTTTGCAAAGGCTaGCTCAGAATCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: VQFCKGCLRILCTRQSLEQFCKG*LRILCT
Trigger: GGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTG...TTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR GCA 90 bp TGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTATCTGCTTATTGTCATaGGCTTGTTCTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CACHLCQGHGWTWLCFLAICLLS*ACSWAA
Trigger: TGCAGCCCAAGAACAAGCGCATGACAATAAGCAGAT...AGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCCACGTCGAAGGAGGTTaGCCAAAATTCTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: SKEVAQNSHPSPASERNSHVEGG*PKFSSQ
Trigger: CTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTG...GCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR GCA 90 bp CCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAAGTGGAGGATTAACCTaGCTACATAGCCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: PRRRRLPKILIPAQLLKESGGLT*LHSPAD
Trigger: ATCTGCTGGGCTATGTAGGCAGGTTAATCCTCCACT...TTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAATGTTGAATTCCAGTaGAAGACACGAACACAGCAC +
Preference number: 4 (lower is better)
Translates to: SPTSKEVAQNSHPSPASENVEFQ*KTRTQH
Trigger: GTGCTGTGTTCGTGTCTTGCACTGGAATTCAACATT...TTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCAGGGCACCAAGTACAATaGATGCCAGACCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPGHQVQ*MPDHRS
Trigger: GGACCTGTGGTCTGGCATGCATTGTACTTGGTGCCC...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAACATAGTGCAAATCTGTaGCTGAGGATAAATCACTTA +
Preference number: 4 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKHSANL*LRINHL
Trigger: TAAGTGATTTATCCTCAGGCACAGATTTGCACTATG...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCACACAGGCCCTGGTGCTaGCTGTTTATCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPHRPWC*LFIFLP
Trigger: GGGAAGGAAGATAAACAGCCAGCACCAGGGCCTGTG...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp TTCCCTGTACTTGAGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCATCTGGCTTTTCCACAGGCCCTaGTGCTGGCTGTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: FPVLEAADSDFKAFLAIWLFHRP*CWLFIF
Trigger: GAAGATAAACAGCCAGCACCAGGGCCTGTGGAAAAG...CCAGATGGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCATCATGCGCTTGTTCTTaGGCTGCAGTTCCGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPSCACS*AAVPSH
Trigger: GTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGA...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp GCTCCTAATAGACTTCACCATTTCCTAGGAGAAGGTTCTACAGATTACCAGGGACTGGGCTCAGTACTCTaGCTGTCCTCCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: APNRLHHFLGEGSTDYQGLGSVL*LSSSKT
Trigger: GGTCTTGGAGGAGGACAGCCAGAGTACTGAGCCCAG...TCCCTGGTAATCTGTAGAACCTTCTCCTAGGAAATGGTGAAGTCTATTAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp GTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCATGTTCCACTTGCCTTTaGGTACTTTGGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: VEMGPPPRRRRLPKILIPCSTCL*VLWDSS
Trigger: AGAAGAATCCCAAAGTACCCAAAGGCAAGTGGAACA...TGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp CCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAACATAAGGAAGGGAATTaGGAAAAGAGGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: PRRRRLPKILIPAQLLKEHKEGN*EKRQGT
Trigger: TGTCCCCTGCCTCTTTTCCCAATTCCCTTCCTTATG...TTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp TCCTTCTGGTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGCCTTTTTGGCCATCTaGGAAAGGAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: SFWSSFAKAASESCAPDRAFLAI*ERKDVI
Trigger: GATGACATCCTTCCTTTCCCAGATGGCCAAAAAGGC...TCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCGGCAGTAGGCTGATTTaGCCCCAGGGCCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: RGSKSTVVETNNMFQRASGSRLI*PQGHSL
Trigger: CAAGCTGTGGCCCTGGGGCCAAATCAGCCTACTGCC...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp ATGACAGCAGCTTCCTTGACCAGTTTTCTACTGGATTCGACCACTGCTTCTGTCCTGATTCCAGTGGTGTaGGCTCAGCCTCCATATCAA +
Preference number: 4 (lower is better)
Translates to: MTAASLTSFLLDSTTASVLIPVV*AQPPYQ
Trigger: TTGATATGGAGGCTGAGCTCACACCACTGGAATCAG...GACAGAAGCAGTGGTCGAATCCAGTAGAAAACTGGTCAAGGAAGCTGCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR TCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCATGGGTCTCTTGTTTTTaGGGGCTGGTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPWVSCF*GLVMLG
Trigger: TCCCAGCATCACCAGCCCTCAAAAACAAGAGACCCA...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp GGGGCTATTATTAGGAACCATGCTCCTGTGAATTCTGTGGAAATGAAAGCCTGTATCCGCGACAGACACTaGATAACCCGCAGCAATCGG +
Preference number: 4 (lower is better)
Translates to: GAIIRNHAPVNSVEMKACIRDRH*ITRSNR
Trigger: CCGATTGCTGCGGGTTATGCAGTGTCTGTCGCGGAT...ACAGGCTTTCATTTCCACAGAATTCACAGGAGCATGGTTCCTAATAATAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAATTCCACAGGCCCTGGTaGTGGCTGTTTATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSFAKAASESCAPDRVLKFHRPW*WLFIFL
Trigger: AAGGAAGATAAACAGCCAGCACCAGGGCCTGTGGAA...TTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR GCA 90 bp TGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTCAGAGTCTTGAAAGCTaGTTTCAGAGTCATCATTCC +
Preference number: 4 (lower is better)
Translates to: CACHLCQGHGWTWLCFLAQSLES*FQSHHS
Trigger: GGAATGATGACTCTGAAAGCAGCTTTCAAGACTCTG...AGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTCCATGATCGCCTGTTTCAGTTCATaGCAAGTCTTTTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: SSLPRTWVDLALLLSSMIACFSS*QVFSWS
Trigger: GGACCATGAAAAGACTTGGCATGAACTGAAACAGGC...GATCATGGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR GCA 90 bp TTCATGCCAAGTCTTTTCATGGTCCGCCAGCGATCCTTAATCATCACAGCTGTTACTGCACAAGCTGTGTaGCTGTCATCTCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: FMPSLFMVRQRSLIITAVTAQAV*LSSLPR
Trigger: CCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGT...AACAGCTGTGATGATTAAGGATCGCTGGCGGACCATGAAAAGACTTGGCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566051.1
CDS-3UTR GCA 90 bp ATGATATTCTGGCACTGCACAAGCTGTGTGCCTGTCATCTCTGCCAAGGACATGATGATATTCTGGCACTaGACAAGCTGTGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: MIFWHCTSCVPVISAKDMMIFWH*TSCVPV
Trigger: GACAGGCACACAGCTTGTGCAGTGCCAGAATATCAT...CATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAATATCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CCA 90 bp GGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTTCATCATTCCAATGGTaGTTGGAGGATTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: GCLRILCTRQSLESCFQSSSFQW*LEDSVA
Trigger: AGCTACGGAATCCTCCAACCACCATTGGAATGATGA...ACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGTCATCATTCCAATGGTaGTTGGAGGATTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVSSFQW*LEDSVA
Trigger: AGCTACGGAATCCTCCAACCACCATTGGAATGATGA...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp CTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTATGTACTGTCTTCATCTaGTGCTGCCTGAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: LCACHLCQGHGWTWLCFLCTVFI*CCLNLK
Trigger: TTTCAAGTTCAGGCAGCACCAGATGAAGACAGTACA...TAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCAAGGCAGAGGTGGCCTTaGGAGATCCATAAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPRQRWP*EIHKVD
Trigger: ATCCACCTTATGGATCTCCCAAGGCCACCTCTGCCT...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp ATGTTGAATTCCAGTGCAAGACACGAACACAGCACAATTAGGGAATCAGGAGGAGATGCTGGGAGAGCTTaGGTAGGAAGAACCAGATCC +
Preference number: 4 (lower is better)
Translates to: MLNSSARHEHSTIRESGGDAGRA*VGRTRS
Trigger: GGATCTGGTTCTTCCTACTCAAGCTCTCCCAGCATC...TCCTCCTGATTCCCTAATTGTGCTGTGTTCGTGTCTTGCACTGGAATTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp ATGATATTCTGGCACTGCACAAGCTGTGTGCCTGTCATCTCTGCCAAGGACATGTGCTTCTTAGCTCCATaGTCTCCAACAGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: MIFWHCTSCVPVISAKDMCFLAP*SPTVMK
Trigger: CTTCATCACTGTTGGAGATCATGGAGCTAAGAAGCA...CATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAATATCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR GCA 90 bp GAAAAGTTCTGGATAACAGGATGGGCCAAGTTCTTTTCTCGAATAATATTCAGGCACCCAGCGATTGACTaGCTCTTCCAGCCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: EKFWITGWAKFFSRIIFRHPAID*LFQPCL
Trigger: GAGGCACGGCTGGAAGAGGCAGTCAATCGCTGGGTG...CCTGAATATTATTCGAGAAAAGAACTTGGCCCATCCTGTTATCCAGAACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR GCA 90 bp AGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCCAAGCGCAGCATCTTCTaGTGGAAGGTCTCATATGAA +
Preference number: 4 (lower is better)
Translates to: RLPKILIPAQLLKETADAKRSIF*WKVSYE
Trigger: TTCATATGAGACCTTCCAGCAGAAGATGCTGCGCTT...GGCATCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp CTTCCTTCCCTGTACTTGAGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCAAAGCGCAGCATCTTCTaGTGGAAGGTCTCATATGAA +
Preference number: 4 (lower is better)
Translates to: LPSLYLRQRTQISKPFWPKRSIF*WKVSYE
Trigger: TTCATATGAGACCTTCCAGCAGAAGATGCTGCGCTT...TGGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR GCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCATTCCACAGGCCCTGGTaGTGGCTGTTTATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPFHRPW*WLFIFL
Trigger: AAGGAAGATAAACAGCCAGCACCAGGGCCTGTGGAA...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp GCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTCCAGAGTCTTGAAAGCTaGTTTCAGAGTCATCATTCC +
Preference number: 4 (lower is better)
Translates to: AASESCAPDRVLKAAFRVQSLES*FQSHHS
Trigger: GGAATGATGACTCTGAAAGCAGCTTTCAAGACTCTG...GACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR GCA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGCAGAGTCTTGAAAGCTaGTTTCAGAGTCATCATTCC +
Preference number: 4 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVQSLES*FQSHHS
Trigger: GGAATGATGACTCTGAAAGCAGCTTTCAAGACTCTG...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp TCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAACTTCTGGTCCAGTTTTaGAAAGGCTGCCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: SSFAKAASESCAPDRVLKLLVQF*KGCLRI
Trigger: GATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAG...TTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR GCA 90 bp ATGATATTCTGGCACTGCACAAGCTGTGTGCCTGTCATCTCTGCCAAGGACATGACTGTCTTCATCTGGTaGTGCCTGAACTTGAAACAG +
Preference number: 4 (lower is better)
Translates to: MIFWHCTSCVPVISAKDMTVFIW*CLNLKQ
Trigger: CTGTTTCAAGTTCAGGCAGCACCAGATGAAGACAGT...CATGTCCTTGGCAGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAATATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCATTCCATTCCCACTCATaGCCTAGTGCAAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPFHSHS*PSARLG
Trigger: TCCAAGCCTTGCACTAGGGCATGAGTGGGAATGGAA...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp GCTGCTTTCAGAGTCATCATTCCAATGGTGGTTGGAGGATTCCGTAGCTGCCTTTCAGCTTCTGAGTTGTaGGGTCCTTGGACATATGTT +
Preference number: 4 (lower is better)
Translates to: AAFRVIIPMVVGGFRSCLSASEL*GPWTYV
Trigger: AACATATGTCCAAGGACCCCACAACTCAGAAGCTGA...AAGGCAGCTACGGAATCCTCCAACCACCATTGGAATGATGACTCTGAAAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp GTTTTTAAAGGGAATCTTATTCCACAAGGACTGGTCTGTCATCAACCTGGGTTCCACAGGCCCTGGTGCTaGCTGTTTATCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VFKGNLIPQGLVCHQPGFHRPWC*LFIFLP
Trigger: GGGAAGGAAGATAAACAGCCAGCACCAGGGCCTGTG...GAACCCAGGTTGATGACAGACCAGTCCTTGTGGAATAAGATTCCCTTTAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp GCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTCATTTCAAAGCCTTTTTaGCCATCTGGGAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AASESCAPDRVLKAAFRVISKPF*PSGKGR
Trigger: CCTTCCTTTCCCAGATGGCCAAAAAGGCTTTGAAAT...GACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR TCA 90 bp GCTCCTAATAGACTTCACCATTTCCTAGGAGAAGGTTCTACAGATTACCAGGGACAGCACATTGATAGCTaGTTCCAGTGGTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: APNRLHHFLGEGSTDYQGQHIDS*FQWCEL
Trigger: GAGCTCACACCACTGGAATCAGCTATCAATGTGCTG...TCCCTGGTAATCTGTAGAACCTTCTCCTAGGAAATGGTGAAGTCTATTAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp AGCAGACTATCAGGGGCTATTATTAGGAACCATGCTCCTGTGAATTCTGTGGAATTCCTTCCCTGTACTTaGGGCAGCGGACTCAGATTT +
Preference number: 4 (lower is better)
Translates to: SRLSGAIIRNHAPVNSVEFLPCT*GSGLRF
Trigger: AAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAA...TTCCACAGAATTCACAGGAGCATGGTTCCTAATAATAGCCCCTGATAGTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp AAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCTTCTTAGCTCCATaGTCTCCAACAGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: KEVAQNSHPSPASERNSRCFLAP*SPTVMK
Trigger: CTTCATCACTGTTGGAGATCATGGAGCTAAGAAGCA...TCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR TCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCAGTGACTCAGTAAGATaGTACATGAAAGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCSDSVR*YMKVLC
Trigger: GCAGAGCACTTTCATGTATCATCTTACTGAGTCACT...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCACTTCTGGTCCAGTTTTaGAAAGGCTGCCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPLLVQF*KGCLRI
Trigger: GATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAG...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp AGGGAAACGCTAATGATATTCTGGCACTGCACAAGCTGTGTGCCTGTCATCTCTCCTCCAAGACCAATCTaGTTATTGTCATGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: RETLMIFWHCTSCVPVISPPRPI*LLSCAC
Trigger: ACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGG...AGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAATATCATTAGCGTTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCTATAGTGCACAGGATTaGTGTGAGAAGCCAATGAGA +
Preference number: 4 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCYSAQD*CEKPMR
Trigger: TCTCATTGGCTTCTCACAGCAATCCTGTGCACTATA...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp GCTGCTTTCAGAGTCATCATTCCAATGGTGGTTGGAGGATTCCGTAGCTGCCTTTTCTGGATAACAGGATaGGCCAAGTTCTTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: AAFRVIIPMVVGGFRSCLFWITG*AKFFSR
Trigger: TCGAGAAAAGAACTTGGCCCATCCTGTTATCCAGAA...AAGGCAGCTACGGAATCCTCCAACCACCATTGGAATGATGACTCTGAAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp GCTGGCTGTTTATCTTCCTTCCCTGTACTTGAGGCAGCGGACTCAGATTTCAAAGAGTCATCATTCCAATaGTGGTTGGAGGATTCCGTA +
Preference number: 4 (lower is better)
Translates to: AGCLSSFPVLEAADSDFKESSFQ*WLEDSV
Trigger: TACGGAATCCTCCAACCACCATTGGAATGATGACTC...TTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAACAGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp GGAGGATTAACCTGCCTACATAGCCCAGCAGATGTTGACAGCAAATGCCAAGGCGGCCAGAACTTGACGTaGAACAAATTTACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GGLTCLHSPADVDSKCQGGQNLT*NKFTPN
Trigger: ATTTGGAGTAAATTTGTTCCACGTCAAGTTCTGGCC...GCCTTGGCATTTGCTGTCAACATCTGCTGGGCTATGTAGGCAGGTTAATCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCGCAACTTGTTGTATATaGTATACAGGCCATGGGCTT +
Preference number: 4 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCATCCI*YTGHGL
Trigger: AAGCCCATGGCCTGTATACCATATACAACAAGTTGC...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR TCA 90 bp GCTGGCTGTTTATCTTCCTTCCCTGTACTTGAGGCAGCGGACTCAGATTTCAAACTGGAAGGTCTCATATaGAAAGTTCTGGATAACAGG +
Preference number: 4 (lower is better)
Translates to: AGCLSSFPVLEAADSDFKLEGLI*KVLDNR
Trigger: CCTGTTATCCAGAACTTTTCATATGAGACCTTCCAG...TTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAACAGCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR GCA 90 bp AGGATGGGCCAAGTTCTTTTCTCGAATAATATTCAGGAGATCATTTCTCAGCTTATCCGCGACAGACACTaGATAACCCGCAGCAATCGG +
Preference number: 4 (lower is better)
Translates to: RMGQVLFSNNIQEIISQLIRDRH*ITRSNR
Trigger: CCGATTGCTGCGGGTTATGCAGTGTCTGTCGCGGAT...AAGCTGAGAAATGATCTCCTGAATATTATTCGAGAAAAGAACTTGGCCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR GCA 90 bp GTTTTTAAAGGGAATCTTATTCCACAAGGACTGGTCTGTCATCAACCTGGGTTCCAGTTTTGCAAAGGCTaGCTCAGAATCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: VFKGNLIPQGLVCHQPGFQFCKG*LRILCT
Trigger: GGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTG...GAACCCAGGTTGATGACAGACCAGTCCTTGTGGAATAAGATTCCCTTTAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp AAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGACAGACTAAGTTCCTTTaGATTTGCATCAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KEVAQNSHPSPASERNSRQTKFL*ICIRRP
Trigger: TGGCCTTCTGATGCAAATGCAAAGGAACTTAGTCTG...TCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCTTGCCAAGTCTCAAATaGTCAGAAGGGTGCAAAATT +
Preference number: 4 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCLPSLK*SEGCKI
Trigger: AATTTTGCACCCTTCTGAGCATTTGAGACTTGGCAA...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCATACATGAAAGTGCTCTaGCCCCAGAAAGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPYMKVL*PQKALH
Trigger: ATGAAGTGCTTTCTGGGGGCAGAGCACTTTCATGTA...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCACCAAGTACAATGCATaGCAGACCACAGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RGSKSTVVETNNMFQRASTKYNA*QTTGPQ
Trigger: TTGGGGACCTGTGGTCTGGCATGCATTGTACTTGGT...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp ACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACTCATATGAAAAGTTCTaGATAACAGGATGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSKEVAQNSHPSPASERNSYEKF*ITGWAK
Trigger: CTTGGCCCATCCTGTTATCCAGAACTTTTCATATGA...GTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp GCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTCATCTCATATGAAAAGTTCTaGATAACAGGATGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ASESCAPDRVLKAAFRVISYEKF*ITGWAK
Trigger: CTTGGCCCATCCTGTTATCCAGAACTTTTCATATGA...GATGACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp TTCAACCACATGAGAAGTGGAGGATTAACCTGCCTACATAGCCCAGCAGATGTTGGTTTTAACAGGTCATaGAGTCACAAGTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: FNHMRSGGLTCLHSPADVGFNRS*SHKWLL
Trigger: TAGGAGCCACTTGTGACTCCATGACCTGTTAAAACC...AACATCTGCTGGGCTATGTAGGCAGGTTAATCCTCCACTTCTCATGTGGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp AGGGAAACGCTAATGATATTCTGGCACTGCACAAGCTGTGTGCCTGTCATCTCTGGTCTGTCATCAACCTaGGTTCATAACAGACTAAGT +
Preference number: 4 (lower is better)
Translates to: RETLMIFWHCTSCVPVISGLSST*VHNRLS
Trigger: ACTTAGTCTGTTATGAACCCAGGTTGATGACAGACC...AGAGATGACAGGCACACAGCTTGTGCAGTGCCAGAATATCATTAGCGTTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp TTCAACCACATGAGAAGTGGAGGATTAACCTGCCTACATAGCCCAGCAGATGTTCTGGAAGGTCTCATATaGAAAGTTCTGGATAACAGG +
Preference number: 4 (lower is better)
Translates to: FNHMRSGGLTCLHSPADVLEGLI*KVLDNR
Trigger: CCTGTTATCCAGAACTTTTCATATGAGACCTTCCAG...AACATCTGCTGGGCTATGTAGGCAGGTTAATCCTCCACTTCTCATGTGGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCTTCCTTCCCTGTACTTGAGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCAAGAGGCCACAGAATTaGATTAATTCTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSFPVLEAADSDFKAFLAKRPQN*INSLLL
Trigger: AAGAAGCAGAGAATTAATGCAATTCTGTGGCCTCTT...GGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp ATAATGACAGCAGCTTCCTTGACCAGTTTTCTACTGGATTCGACCACTGCTTCTTCAGCTTCTGAGTTGTaGGGTCCTTGGACATATGTT +
Preference number: 4 (lower is better)
Translates to: IMTAASLTSFLLDSTTASSASEL*GPWTYV
Trigger: AACATATGTCCAAGGACCCCACAACTCAGAAGCTGA...AGAAGCAGTGGTCGAATCCAGTAGAAAACTGGTCAAGGAAGCTGCTGTCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR CCA 90 bp GTTTATCTTCCTTCCCTGTACTTGAGGCAGCGGACTCAGATTTCAAAGCCTTTTCGCAGCATCTTCTGCTaGAAGGTCTCATATGAAAAG +
Preference number: 4 (lower is better)
Translates to: VYLPSLYLRQRTQISKPFRSIFC*KVSYEK
Trigger: CTTTTCATATGAGACCTTCCAGCAGAAGATGCTGCG...AAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CCA 90 bp GGGGCTATTATTAGGAACCATGCTCCTGTGAATTCTGTGGAAATGAAAGCCTGTGAGTCATCATTCCAATaGTGGTTGGAGGATTCCGTA +
Preference number: 4 (lower is better)
Translates to: GAIIRNHAPVNSVEMKACESSFQ*WLEDSV
Trigger: TACGGAATCCTCCAACCACCATTGGAATGATGACTC...ACAGGCTTTCATTTCCACAGAATTCACAGGAGCATGGTTCCTAATAATAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp GTTTTTAAAGGGAATCTTATTCCACAAGGACTGGTCTGTCATCAACCTGGGTTCCAGAAGGCCAGAACTTaGCGTGGAACAAATTTACTC +
Preference number: 4 (lower is better)
Translates to: VFKGNLIPQGLVCHQPGFQKART*RGTNLL
Trigger: GAGTAAATTTGTTCCACGTCAAGTTCTGGCCTTCTG...GAACCCAGGTTGATGACAGACCAGTCCTTGTGGAATAAGATTCCCTTTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TTCTGCTGGAAGGTCTCATATGAAAAGTTCTGGATAACAGGATGGGCCAAGTTCACTGGATTCGACCACTaGTTCTGTCAGTGTAAATTC +
Preference number: 4 (lower is better)
Translates to: FCWKVSYEKFWITGWAKFTGFDH*FCQCKF
Trigger: GAATTTACACTGACAGAAGCAGTGGTCGAATCCAGT...GAACTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTTCCAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR GCA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCATCTGCTTATTGTCATaGGCTTGTTCTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGSKSTVVETNNMFQRASICLLS*ACSWAA
Trigger: TGCAGCCCAAGAACAAGCGCATGACAATAAGCAGAT...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR GCA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCCCTCCAAGACCAATCTaGTTATTGTCATGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: RGSKSTVVETNNMFQRASPPRPI*LLSCAC
Trigger: ACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGG...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp AGCAGACTATCAGGGGCTATTATTAGGAACCATGCTCCTGTGAATTCTGTGGAATTCTGGATAACAGGATaGGCCAAGTTCTTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SRLSGAIIRNHAPVNSVEFWITG*AKFFSR
Trigger: TCGAGAAAAGAACTTGGCCCATCCTGTTATCCAGAA...TTCCACAGAATTCACAGGAGCATGGTTCCTAATAATAGCCCCTGATAGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR CAA 72 bp AGCAAGCACAACACAGTACAAAAGGAGAAGGGAATGTaGAATTCCAGTGCAAGACACGAACACAGCACAATT +
Preference number: 4 (lower is better)
Translates to: SKHNTVQKEKGM*NSSARHEHSTI
Trigger: AATTGTGCTGTGTTCGTGTCTTGCACTGGAATTCAACATTCCCTTCTCCTTTTGTACTGTGTTGTGCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR TCA 90 bp TGCTGGAAGGTCTCATATGAAAAGTTCTGGATAACAGGATGGGCCAAGTTCTTTCTGGAAGGTCTCATATaGAAAGTTCTGGATAACAGG +
Preference number: 4 (lower is better)
Translates to: CWKVSYEKFWITGWAKFFLEGLI*KVLDNR
Trigger: CCTGTTATCCAGAACTTTTCATATGAGACCTTCCAG...AAAGAACTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTTCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR GCA 90 bp CTTTGCATTTGCATCAGAAGGCCAGAACTTGACGTGGAACAAATTTACTCCAAAGCCTGTTTCAGTTCATaGCAAGTCTTTTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: LCICIRRPELDVEQIYSKACFSS*QVFSWS
Trigger: GGACCATGAAAAGACTTGGCATGAACTGAAACAGGC...TTTGGAGTAAATTTGTTCCACGTCAAGTTCTGGCCTTCTGATGCAAATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CCA 90 bp ATAATGACAGCAGCTTCCTTGACCAGTTTTCTACTGGATTCGACCACTGCTTCTTCATATGAAAAGTTCTaGATAACAGGATGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: IMTAASLTSFLLDSTTASSYEKF*ITGWAK
Trigger: CTTGGCCCATCCTGTTATCCAGAACTTTTCATATGA...AGAAGCAGTGGTCGAATCCAGTAGAAAACTGGTCAAGGAAGCTGCTGTCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR CCA 90 bp CTTTGCATTTGCATCAGAAGGCCAGAACTTGACGTGGAACAAATTTACTCCAAACGCAGCATCTTCTGCTaGAAGGTCTCATATGAAAAG +
Preference number: 4 (lower is better)
Translates to: LCICIRRPELDVEQIYSKRSIFC*KVSYEK
Trigger: CTTTTCATATGAGACCTTCCAGCAGAAGATGCTGCG...TTTGGAGTAAATTTGTTCCACGTCAAGTTCTGGCCTTCTGATGCAAATGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
3UTR CAA 72 bp AGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTaGCCAAGTCTCAAATGCTCAGAAGGGTGCAAAATT +
Preference number: 4 (lower is better)
Translates to: SRTWEISKYSLN*PSLKCSEGCKI
Trigger: AATTTTGCACCCTTCTGAGCATTTGAGACTTGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCTCATATGAAAAGTTCTaGATAACAGGATGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RGSKSTVVETNNMFQRASSYEKF*ITGWAK
Trigger: CTTGGCCCATCCTGTTATCCAGAACTTTTCATATGA...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CCA 90 bp TCTACAGATTACCAGGGATTTAAATTTAAGCAAACCACTAAAGAAGGGAAACGCCAACCACATGAGAAGTaGAGGATTAACCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: STDYQGFKFKQTTKEGKRQPHEK*RINLPT
Trigger: TGTAGGCAGGTTAATCCTCCACTTCTCATGTGGTTG...GCGTTTCCCTTCTTTAGTGGTTTGCTTAAATTTAAATCCCTGGTAATCTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR GCA 90 bp TCTACAGATTACCAGGGATTTAAATTTAAGCAAACCACTAAAGAAGGGAAACGCACTGGATTCGACCACTaGTTCTGTCAGTGTAAATTC +
Preference number: 4 (lower is better)
Translates to: STDYQGFKFKQTTKEGKRTGFDH*FCQCKF
Trigger: GAATTTACACTGACAGAAGCAGTGGTCGAATCCAGT...GCGTTTCCCTTCTTTAGTGGTTTGCTTAAATTTAAATCCCTGGTAATCTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS GCA 90 bp CCCGCCCGCTACTGCGGGACGCCCGCCTGCCAGCTGCCCGCCCGCTaGCGTCGCTACTCCCGCCTCCTCCCGCCATCGTGTCCGATCGCC +
Preference number: 5 (lower is better)
Translates to: PARYCGTPACQLPAR*RRYSRLLPPSCPIA
Trigger: GGCGATCGGACACGATGGCGGGAGGAGGCGGGAGTAGCGACGGCAGCGGGCGGGCAGCTGGCAGGCGGGCGTCCCGCAGTAGCGGGCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000567296.6
CDS TCA 90 bp CGGTGGGCTTGGATGGTGGCGCTGAAGCGGCCTCCTGGGAGGAGTTaGGGCCTGCGCTGGGCTCAGTACTCTGGCTGTCCTCCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: RWAWMVALKRPPGRS*GLRWAQYSGCPPPR
Trigger: TCTTGGAGGAGGACAGCCAGAGTACTGAGCCCAGCGCAGGCCTCAACTCCTCCCAGGAGGCCGCTTCAGCGCCACCATCCAAGCCCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567130.1
ENST00000569584.6
CDS CCA 90 bp TGGTTGAGAACGGTGGGCTTGGATGGTGGCGCTGAAGCGGCCTCCTaGGAGGAGTTGAGGCCTGCGCTGGGCTCAGTACTCTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: WLRTVGLDGGAEAAS*EELRPALGSVLWLS
Trigger: GGACAGCCAGAGTACTGAGCCCAGCGCAGGCCTCAACTCCTCCCAGGAGGCCGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567130.1
ENST00000569584.6
CDS CCA 90 bp TCGGGACACGGTGTGCTCCTTCCCCAAGGGCCTGACAAGCAAAGCTaGGAGAGAAGACATCGTTGGCTGGGCGACCCCCAGTCCCGACTC +
Preference number: 5 (lower is better)
Translates to: SGHGVLLPQGPDKQS*ERRHRWLGDPQSRL
Trigger: GAGTCGGGACTGGGGGTCGCCCAGCCAACGATGTCTTCTCTCCCAGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566750.5
CDS-3UTR CAA 90 bp GGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTGATTCCGTAGCTGCCTaGCGGGTTCTCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GTSPTSKEVAQNSHPSPADSVAA*RVLWVA
Trigger: AGCCACCCAGAGAACCCGCAAGGCAGCTACGGAATC...AGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS GCA 90 bp ATCCGCGACAGACACTGCATAACCCGCAGCAATCGGGACACGGTGTaGTCCTTCCCCAAGGGCCTGACAAGCAAAGCGGCTACCCCGAAA +
Preference number: 5 (lower is better)
Translates to: IRDRHCITRSNRDTV*SFPKGLTSKAATPK
Trigger: TTTCGGGGTAGCCGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATTGCTGCGGGTTATGCAGTGTCTGTCGCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR CAA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGAGCAGCTATGCCCATTaGCCAGCCGGTGACTCACTT +
Preference number: 5 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWSSYAH*PAGDSL
Trigger: AAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCT...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS TCA 90 bp GAAGGTCTTCATACTTGGGATTCTTCTCTCCAGGGAGGGGTTGGTTaGGAACGGTGGGCTTGGATGGTGGCGCTGAAGCGGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: EGLHTWDSSLQGGVG*ERWAWMVALKRPPG
Trigger: CCCAGGAGGCCGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAAGTATGAAGACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS GCA 90 bp ATCCGCGACAGACACTGCATAACCCGCAGCAATCGGGACACGGTGTaGTCCTTCCCCAAGGGCCTGACAAGCAAAGCCTGCATGATGTCC +
Preference number: 5 (lower is better)
Translates to: IRDRHCITRSNRDTV*SFPKGLTSKACMMS
Trigger: GGACATCATGCAGGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATTGCTGCGGGTTATGCAGTGTCTGTCGCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000567296.6
CDS-3UTR CAA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGTCATTCCAATGGTGGTaGGAGGATTCCGTAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWSFQWW*EDSVAA
Trigger: GGCAGCTACGGAATCCTCCAACCACCATTGGAATGA...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS GCA 90 bp ATCCGCGACAGACACTGCATAACCCGCAGCAATCGGGACACGGTGTaGTCCTTCCCCAAGGGCCTGACAAGCAAAGCTTTCACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: IRDRHCITRSNRDTV*SFPKGLTSKAFTRV
Trigger: CACCCTTGTGAAAGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATTGCTGCGGGTTATGCAGTGTCTGTCGCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567841.1
CDS CCA 90 bp TGTCCTCCTCCAAGACCAATCTGCTTATTGTCATGCGCTTGTTCTTaGGCTGCAGTTCCGAGCCACCCTCACCGTCAGCCGGGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: CPPPRPICLLSCACS*AAVPSHPHRQPGLN
Trigger: GTTCAGCCCCGGCTGACGGTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS GCA 90 bp TCCTCCAAGACCAATCTGCTTATTGTCATGCGCTTGTTCTTGGGCTaGAGTTCCGAGCCACCCTCACCGTCAGCCGGGGCTGAACTTTCG +
Preference number: 5 (lower is better)
Translates to: SSKTNLLIVMRLFLG*SSEPPSPSAGAELS
Trigger: CGAAAGTTCAGCCCCGGCTGACGGTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS GCA 90 bp CTGCGCTGGGCTCAGTACTCTGGCTGTCCTCCTCCAAGACCAATCTaGTTATTGTCATGCGCTTGTTCTTGGGCTGCAGTTCCGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LRWAQYSGCPPPRPI*LLSCACSWAAVPSH
Trigger: GTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGGAGGACAGCCAGAGTACTGAGCCCAGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567130.1
ENST00000569584.6
CDS CCA 90 bp CAAAGAAGGTCTTCATACTTGGGATTCTTCTCTCCAGGGAGGGGTTaGTTGAGAACGGTGGGCTTGGATGGTGGCGCTGAAGCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: QRRSSYLGFFSPGRG*LRTVGLDGGAEAAS
Trigger: GGAGGCCGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAAGTATGAAGACCTTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp GTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCATTGAGCACCCAGCGATaGACTGCCTCTTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: VEMGPPPRRRRLPKILIPLSTQR*TASSSR
Trigger: ACGGCTGGAAGAGGCAGTCAATCGCTGGGTGCTCAA...TGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAGGGAAGCCCTTCTGGTCCAGTTTaGCAAAGGCTGCCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: QAGQSAWREDPPQDTKGSPSGPV*QRLPQN
Trigger: ATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGG...GCTTCCCTTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp AAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGGACATGGGTGGACTaGGCTCTGCTTCTTAGCTCC +
Preference number: 5 (lower is better)
Translates to: KWDLPHVEGGCPKFSSQPRTWVD*ALLLSS
Trigger: GGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCT...GGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CAA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGCCCCAGGGCCACAGCTaGCCAACCCCTGCTGCTTTA +
Preference number: 5 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVPQGHS*PTPAAL
Trigger: TAAAGCAGCAGGGGTTGGCAAGCTGTGGCCCTGGGG...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS GCA 90 bp GGCTCGGCGTCATCCAGGTGGCTCTCCAGGAAGCGCAGCATCTTCTaGTGGAAGGTCTCATATGAAAAGTTCTGGATAACAGGATGGGCC +
Preference number: 5 (lower is better)
Translates to: GSASSRWLSRKRSIF*WKVSYEKFWITGWA
Trigger: GGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTTCCAGCAGAAGATGCTGCGCTTCCTGGAGAGCCACCTGGATGACGCCGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254942.8
ENST00000564982.6
ENST00000566257.5
ENST00000566750.5
ENST00000567296.6
ENST00000569584.6
ENST00000569611.6
CDS GCA 90 bp CAGTACTCTGGCTGTCCTCCTCCAAGACCAATCTGCTTATTGTCATaGGCTTGTTCTTGGGCTGCAGTTCCGAGCCACCCTCACCGTCAG +
Preference number: 5 (lower is better)
Translates to: QYSGCPPPRPICLLS*ACSWAAVPSHPHRQ
Trigger: CTGACGGTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGGAGGACAGCCAGAGTACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS-3UTR CAA 90 bp GCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTCGATTCCGTAGCTGCCTaGCGGGTTCTCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: AASESCAPDRVLKAAFRVDSVAA*RVLWVA
Trigger: AGCCACCCAGAGAACCCGCAAGGCAGCTACGGAATC...GACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CAA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGGATTCCGTAGCTGCCTaGCGGGTTCTCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVDSVAA*RVLWVA
Trigger: AGCCACCCAGAGAACCCGCAAGGCAGCTACGGAATC...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp GGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTGCACCAGACAGAGTCTaGAAAGCTGCTTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: GPPPRRRRLPKILIPAQLAPDRV*KAAFRV
Trigger: GACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGC...AAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CCTAGTGCAAGGCTTGGAAGCCCACATGCGGGGCTTCAGAACCGGCAGGGATGGAGACCAATCTGCTTATaGTCATGCGCTTGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PSARLGSPHAGLQNRQGWRPICL*SCACSW
Trigger: CCAAGAACAAGCGCATGACAATAAGCAGATTGGTCT...CCATCCCTGCCGGTTCTGAAGCCCCGCATGTGGGCTTCCAAGCCTTGCACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp GGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCAGACAGGTCTAGGGTaGATGTCACGACTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: GPPPRRRRLPKILIPAQLQTGLG*MSRLAK
Trigger: TTTAGCCAGTCGTGACATCAACCCTAGACCTGTCTG...AAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAACAGTCTGAGCAAGCCTaGGTGGTGAGTAACTTAGCT +
Preference number: 5 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKQSEQA*VVSNLA
Trigger: AGCTAAGTTACTCACCACCAAGGCTTGCTCAGACTG...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp TCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAACTTCCTTCCCTGTACTaGAGGCAGCGGACTCAGATT +
Preference number: 5 (lower is better)
Translates to: SPTSKEVAQNSHPSPASELPSLY*RQRTQI
Trigger: AATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAG...TTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTACTGGGTCTCTTGTTTTaGAGGGCTGGTGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: LCACHLCQGHGWTWLCFLLGLLF*RAGDAG
Trigger: CCCAGCATCACCAGCCCTCAAAAACAAGAGACCCAG...TAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGGTCATGCGCTTGTTCTaGGGCTGCAGTTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVVMRLF*GCSSEP
Trigger: TGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGAC...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS TCA 90 bp TTCCACAGGCCCTGGTGCTGGCTGTTTATCTTCCTTCCCTGTACTTaGGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCATCGTGAG +
Preference number: 5 (lower is better)
Translates to: FHRPWCWLFIFLPCT*GSGLRFQSLFGHRE
Trigger: CTCACGATGGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAACAGCCAGCACCAGGGCCTGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000566750.5
ENST00000569584.6
CDS-3UTR CAA 90 bp CTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTACTTATTGTCATGCGCTaGTTCTTGGGCTGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LCACHLCQGHGWTWLCFLLIVMR*FLGCSS
Trigger: GGAACTGCAGCCCAAGAACAAGCGCATGACAATAAG...TAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCACTCTCCAGGGAGGGGTaGGTTGAGAACGGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPLSREG*VENGGL
Trigger: AAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAG...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp GCTGTGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTTGGTGCTGCCTGAACTaGAAACAGTTCATCCTCTTC +
Preference number: 5 (lower is better)
Translates to: AVCLSSLPRTWVDLALLLWCCLN*KQFILF
Trigger: GAAGAGGATGAACTGTTTCAAGTTCAGGCAGCACCA...AAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS TCA 90 bp TTCCACAGGCCCTGGTGCTGGCTGTTTATCTTCCTTCCCTGTACTTaGGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCATAGCTTC +
Preference number: 5 (lower is better)
Translates to: FHRPWCWLFIFLPCT*GSGLRFQSLFGHSF
Trigger: GAAGCTATGGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAACAGCCAGCACCAGGGCCTGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569542.6
CDS-3UTR CAA 90 bp GCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTCATCTCATTCCAATGGTGGTaGGAGGATTCCGTAGCTGCC +
Preference number: 5 (lower is better)
Translates to: ASESCAPDRVLKAAFRVISFQWW*EDSVAA
Trigger: GGCAGCTACGGAATCCTCCAACCACCATTGGAATGA...GATGACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CAA 90 bp ATGTTGAATTCCAGTGCAAGACACGAACACAGCACAATTAGGGAATCAGGAGGATTGAGAACGGTGGGCTaGGATGGTGGCGCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: MLNSSARHEHSTIRESGGLRTVG*DGGAEA
Trigger: CGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAA...TCCTCCTGATTCCCTAATTGTGCTGTGTTCGTGTCTTGCACTGGAATTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp TGTGCCTGTCATCTCTGCCAAGGACATGGGTGGACTTGGCTCTGCTTCTTAGCTCTGTTCCACTTGCCTTaGGGTACTTTGGGATTCTTC +
Preference number: 5 (lower is better)
Translates to: CACHLCQGHGWTWLCFLALFHLP*GTLGFF
Trigger: GAAGAATCCCAAAGTACCCAAAGGCAAGTGGAACAG...AGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCTTGGCAGAGATGACAGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp AGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCCCCACGTCGAAGGAGGTaGCCCAAAATTCTCATCCCA +
Preference number: 5 (lower is better)
Translates to: RLPKILIPAQLLKETADAPRRRR*PKILIP
Trigger: TGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG...GGCATCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CAA 90 bp ATGAAGTGGAAATGGGACCTCCCCCACGTCGAAGGAGGTTGCCCAAAATTCTCAATAGCCCAGCAGATGTaGACAGCAAATGCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: MKWKWDLPHVEGGCPKFSIAQQM*TANAKA
Trigger: TGCCTTGGCATTTGCTGTCAACATCTGCTGGGCTAT...TGAGAATTTTGGGCAACCTCCTTCGACGTGGGGGAGGTCCCATTTCCACTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CAGAGAGCAAGCAGGCCAGTCTGCCTGGAGGGAGGATCCACCACAGGACACAAAAAGTATTCACTGAACTaGCCAAGTCTCAAATGCTCA +
Preference number: 5 (lower is better)
Translates to: QRASRPVCLEGGSTTGHKKYSLN*PSLKCS
Trigger: TGAGCATTTGAGACTTGGCAAGTTCAGTGAATACTT...TTTGTGTCCTGTGGTGGATCCTCCCTCCAGGCAGACTGGCCTGCTTGCTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCATGCAGTGGTGCAATCTaGGCTCACTGTGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPCSGAI*AHCAAS
Trigger: GGAGGCTGCACAGTGAGCCAAGATTGCACCACTGCA...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS TCA 90 bp TTCCACAGGCCCTGGTGCTGGCTGTTTATCTTCCTTCCCTGTACTTaGGGCAGCGGACTCAGATTTCAAAGCCTTTTTGGCCATAAATCC +
Preference number: 5 (lower is better)
Translates to: FHRPWCWLFIFLPCT*GSGLRFQSLFGHKS
Trigger: GGATTTATGGCCAAAAAGGCTTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAACAGCCAGCACCAGGGCCTGTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566257.5
CDS CCA 90 bp GCAAAGCTTTCACAAGGGTGTTTTACAGCTCTCTCTCTCTCTCCCTaGCCAAGGAAACATCTTCAGTCAGTTCTTCCACAAGCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: AKLSQGCFTALSLSP*PRKHLQSVLPQAPV
Trigger: GACTGGGGCTTGTGGAAGAACTGACTGAAGATGTTTCCTTGGCCAGGGAGAGAGAGAGAGAGCTGTAAAACACCCTTGTGAAAGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567841.1
CDS-3UTR CAA 90 bp CTTGACCAGTTTTCTACTGGATTCGACCACTGCTTCTGTCAGTGTAAATTCCGTTTGAGCACCCAGCGATaGACTGCCTCTTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: LDQFSTGFDHCFCQCKFRLSTQR*TASSSR
Trigger: ACGGCTGGAAGAGGCAGTCAATCGCTGGGTGCTCAA...ACGGAATTTACACTGACAGAAGCAGTGGTCGAATCCAGTAGAAAACTGGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR CAA 90 bp GCTGGCTGTTTATCTTCCTTCCCTGTACTTGAGGCAGCGGACTCAGATTTCAAACTTCCTTCCCTGTACTaGAGGCAGCGGACTCAGATT +
Preference number: 5 (lower is better)
Translates to: AGCLSSFPVLEAADSDFKLPSLY*RQRTQI
Trigger: AATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAG...TTTGAAATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAGATAAACAGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CAA 90 bp GTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAGCACCAGACAGAGTCTaGAAAGCTGCTTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: VQFCKGCLRILCTRQSLEAPDRV*KAAFRV
Trigger: GACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGC...TTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CAA 90 bp TCTCCTGTTTCCTCATCTGTTCCCGGGAGCAATACCTATAGTGCACAGGATTGCGCACCAGACAGAGTCTaGAAAGCTGCTTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SPVSSSVPGSNTYSAQDCAPDRV*KAAFRV
Trigger: GACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGC...GCAATCCTGTGCACTATAGGTATTGCTCCCGGGAACAGATGAGGAAACAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp GTCCAGTTTTGCAAAGGCTGCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAACCTTCTGGTCCAGTTTaGCAAAGGCTGCCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: VQFCKGCLRILCTRQSLEPSGPV*QRLPQN
Trigger: ATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGG...TTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CAA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCTTGAGAACGGTGGGCTaGGATGGTGGCGCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: RGSKSTVVETNNMFQRASLRTVG*DGGAEA
Trigger: CGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAA...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp AAGTCTTTTCATGGTCCGCCAGCGATCCTTAATCATCACAGCTGTTCGGTTAACAGGACATGGGTGGACTaGGCTCTGCTTCTTAGCTCC +
Preference number: 5 (lower is better)
Translates to: KSFHGPPAILNHHSCSVNRTWVD*ALLLSS
Trigger: GGAGCTAAGAAGCAGAGCCAAGTCCACCCATGTCCT...GTTAACCGAACAGCTGTGATGATTAAGGATCGCTGGCGGACCATGAAAAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566051.1
CDS-3UTR CAA 90 bp GTTTTTAAAGGGAATCTTATTCCACAAGGACTGGTCTGTCATCAACCTGGGTTCGTCATGCGCTTGTTCTaGGGCTGCAGTTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: VFKGNLIPQGLVCHQPGFVMRLF*GCSSEP
Trigger: TGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGAC...GAACCCAGGTTGATGACAGACCAGTCCTTGTGGAATAAGATTCCCTTTAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CTTTGCATTTGCATCAGAAGGCCAGAACTTGACGTGGAACAAATTTACTCCAAACTCTCCAGGGAGGGGTaGGTTGAGAACGGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: LCICIRRPELDVEQIYSKLSREG*VENGGL
Trigger: AAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAG...TTTGGAGTAAATTTGTTCCACGTCAAGTTCTGGCCTTCTGATGCAAATGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp TCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCTTAGAGCTGTTCCACTaGCCTTTGGGTACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: SKEVAQNSHPSPASERNSLELFH*PLGTLG
Trigger: TCCCAAAGTACCCAAAGGCAAGTGGAACAGCTCTAA...GCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS GCA 90 bp TTGAGTAGGAAGAACCAGATCCTTCTGGTCCAGTTTTGCAAAGGCTaGCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LSRKNQILLVQFCKG*LRILCTRQSLESCF
Trigger: AAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGGATCTGGTTCTTCCTACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254942.8
ENST00000566257.5
ENST00000566750.5
ENST00000569542.6
ENST00000569584.6
CDS-3UTR CAA 90 bp AGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCCATCATCTCCAGCACATaGATAGCTGATTCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: RLPKILIPAQLLKETADAIISST*IADSSG
Trigger: ACCACTGGAATCAGCTATCAATGTGCTGGAGATGAT...GGCATCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp GCTCCTAATAGACTTCACCATTTCCTAGGAGAAGGTTCTACAGATTACCAGGGATCATTCCAATGGTGGTaGGAGGATTCCGTAGCTGCC +
Preference number: 5 (lower is better)
Translates to: APNRLHHFLGEGSTDYQGSFQWW*EDSVAA
Trigger: GGCAGCTACGGAATCCTCCAACCACCATTGGAATGA...TCCCTGGTAATCTGTAGAACCTTCTCCTAGGAAATGGTGAAGTCTATTAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCCTGGGTCTCTTGTTTTaGAGGGCTGGTGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: RGSKSTVVETNNMFQRASLGLLF*RAGDAG
Trigger: CCCAGCATCACCAGCCCTCAAAAACAAGAGACCCAG...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp ACGTCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACTCTTTTCTGGGTCTCTaGTTTTTGAGGGCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: TSKEVAQNSHPSPASERNSFLGL*FLRAGD
Trigger: ATCACCAGCCCTCAAAAACAAGAGACCCAGAAAAGA...GTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp AGCAGACTATCAGGGGCTATTATTAGGAACCATGCTCCTGTGAATTCTGTGGAACCACGTCGAAGGAGGTaGCCCAAAATTCTCATCCCA +
Preference number: 5 (lower is better)
Translates to: SRLSGAIIRNHAPVNSVEPRRRR*PKILIP
Trigger: TGGGATGAGAATTTTGGGCAACCTCCTTCGACGTGG...TTCCACAGAATTCACAGGAGCATGGTTCCTAATAATAGCCCCTGATAGTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000566051.1
CDS-3UTR CAA 90 bp GCCTCAGAATCCTGTGCACCAGACAGAGTCTTGAAAGCTGCTTTCAGAGTCATCGATTTCAAAGCCTTTTaGGCCATCTGGGAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: ASESCAPDRVLKAAFRVIDFKAF*AIWERK
Trigger: CTTCCTTTCCCAGATGGCCAAAAAGGCTTTGAAATC...GATGACTCTGAAAGCAGCTTTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564982.6
CDS-3UTR CAA 90 bp TCGAAGGAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCGTCCACTTCCTGAACTaGAAACAGTTCATCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SKEVAQNSHPSPASERNSVHFLN*KQFILF
Trigger: GAAGAGGATGAACTGTTTCAAGTTCAGGAAGTGGAC...GCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTCCTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566051.1
CDS-3UTR CAA 90 bp ATGACAGCAGCTTCCTTGACCAGTTTTCTACTGGATTCGACCACTGCTTCTGTCATCATCTCCAGCACATaGATAGCTGATTCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: MTAASLTSFLLDSTTASVIISST*IADSSG
Trigger: ACCACTGGAATCAGCTATCAATGTGCTGGAGATGAT...GACAGAAGCAGTGGTCGAATCCAGTAGAAAACTGGTCAAGGAAGCTGCTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS-3UTR CAA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCCTTCCTTCCCTGTACTaGAGGCAGCGGACTCAGATT +
Preference number: 5 (lower is better)
Translates to: RGSKSTVVETNNMFQRASLPSLY*RQRTQI
Trigger: AATCTGAGTCCGCTGCCTCAAGTACAGGGAAGGAAG...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp GAGGTTGCCCAAAATTCTCATCCCAGCCCAGCTTCTGAAAGAAACAGCAGATGCTCAGAAGGCCAGAACTaGACGTGGAACAAATTTACT +
Preference number: 5 (lower is better)
Translates to: EVAQNSHPSPASERNSRCSEGQN*TWNKFT
Trigger: AGTAAATTTGTTCCACGTCAAGTTCTGGCCTTCTGA...GCATCTGCTGTTTCTTTCAGAAGCTGGGCTGGGATGAGAATTTTGGGCAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGAAGACACTCAGATGTTaGCTAAAAATGAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVKTLRC*LKMKAA
Trigger: CGCTGCTTTCATTTTTAGCAAACATCTGAGTGTCTT...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp CCAGCAGCTATGCCCATTTGCCAGCCGGTGACTCACTTCTACATACAAGTAGTGTTAGACTTCATATCCTaGACATATGAGAGAGGGTGT +
Preference number: 5 (lower is better)
Translates to: PAAMPICQPVTHFYIQVVLDFIS*TYERGC
Trigger: ACACCCTCTCTCATATGTCAAGGATATGAAGTCTAA...CACTACTTGTATGTAGAAGTGAGTCACCGGCTGGCAAATGGGCATAGCTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp GCTCCTAATAGACTTCACCATTTCCTAGGAGAAGGTTCTACAGATTACCAGGGATTCTCAGCTTCTGAGTaGTGGGGTCCTTGGACATAT +
Preference number: 5 (lower is better)
Translates to: APNRLHHFLGEGSTDYQGFSASE*WGPWTY
Trigger: ATATGTCCAAGGACCCCACAACTCAGAAGCTGAGAA...TCCCTGGTAATCTGTAGAACCTTCTCCTAGGAAATGGTGAAGTCTATTAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp GTTTTTAAAGGGAATCTTATTCCACAAGGACTGGTCTGTCATCAACCTGGGTTCCCTTCTGGTCCAGTTTaGCAAAGGCTGCCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: VFKGNLIPQGLVCHQPGFPSGPV*QRLPQN
Trigger: ATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGG...GAACCCAGGTTGATGACAGACCAGTCCTTGTGGAATAAGATTCCCTTTAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp CCCACAGTACCTAGCAGGACATGGGAGATTAGTAAGTATTCACTGAACTTGCCATCTTTTCTGGGTCTCTaGTTTTTGAGGGCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: PTVPSRTWEISKYSLNLPSFLGL*FLRAGD
Trigger: ATCACCAGCCCTCAAAAACAAGAGACCCAGAAAAGA...TGGCAAGTTCAGTGAATACTTACTAATCTCCCATGTCCTGCTAGGTACTGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp AGAGGAAGCAAAAGTACAGTGGTAGAAACAAACAACATGTTCCAGAGAGCAAGCCTTATTGTCATGCGCTaGTTCTTGGGCTGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: RGSKSTVVETNNMFQRASLIVMR*FLGCSS
Trigger: GGAACTGCAGCCCAAGAACAAGCGCATGACAATAAG...GCTTGCTCTCTGGAACATGTTGTTTGTTTCTACCACTGTACTTTTGCTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS-3UTR CAA 90 bp ATGTTGAATTCCAGTGCAAGACACGAACACAGCACAATTAGGGAATCAGGAGGAAGACCAATCTGCTTATaGTCATGCGCTTGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: MLNSSARHEHSTIRESGGRPICL*SCACSW
Trigger: CCAAGAACAAGCGCATGACAATAAGCAGATTGGTCT...TCCTCCTGATTCCCTAATTGTGCTGTGTTCGTGTCTTGCACTGGAATTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS-3UTR CAA 90 bp GGGGCTATTATTAGGAACCATGCTCCTGTGAATTCTGTGGAAATGAAAGCCTGTAAGGAGAAGGGAATGTaGAATTCCAGTGCAAGACAC +
Preference number: 5 (lower is better)
Translates to: GAIIRNHAPVNSVEMKACKEKGM*NSSARH
Trigger: GTGTCTTGCACTGGAATTCAACATTCCCTTCTCCTT...ACAGGCTTTCATTTCCACAGAATTCACAGGAGCATGGTTCCTAATAATAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254942.8
CDS CCA 90 bp AGGAAGCGCAGCATCTTCTGCTGGAAGGTCTCATATGAAAAGTTCTaGATAACAGGATGGGCCAAGTTCTTTTCTCGAATAATATTCAGG +
Preference number: 5 (lower is better)
Translates to: RKRSIFCWKVSYEKF*ITGWAKFFSRIIFR
Trigger: CCTGAATATTATTCGAGAAAAGAACTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTTCCAGCAGAAGATGCTGCGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000254942.8
ENST00000564982.6
ENST00000566257.5
ENST00000566750.5
ENST00000567296.6
ENST00000569584.6
ENST00000569611.6
CDS GCA 72 bp TACTGCGGGACGCCCGCCTGCCAGCTGCCCGCCCGCTaGCGTCGCTACTCCCGCCTCCTCCCGCCATCGTGT +
Preference number: 6 (lower is better)
Translates to: YCGTPACQLPAR*RRYSRLLPPSC
Trigger: ACACGATGGCGGGAGGAGGCGGGAGTAGCGACGGCAGCGGGCGGGCAGCTGGCAGGCGGGCGTCCCGCAGTA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000567296.6
CDS CCA 72 bp ACGGTGGGCTTGGATGGTGGCGCTGAAGCGGCCTCCTaGGAGGAGTTGAGGCCTGCGCTGGGCTCAGTACTC +
Preference number: 6 (lower is better)
Translates to: TVGLDGGAEAAS*EELRPALGSVL
Trigger: GAGTACTGAGCCCAGCGCAGGCCTCAACTCCTCCCAGGAGGCCGCTTCAGCGCCACCATCCAAGCCCACCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567130.1
ENST00000569584.6
CDS TCA 72 bp GGGTTGGTTGAGAACGGTGGGCTTGGATGGTGGCGCTaGAGCGGCCTCCTGGGAGGAGTTGAGGCCTGCGCT +
Preference number: 6 (lower is better)
Translates to: GLVENGGLGWWR*SGLLGGVEACA
Trigger: AGCGCAGGCCTCAACTCCTCCCAGGAGGCCGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567130.1
ENST00000569584.6
CDS TCA 72 bp GCAATCGGGACACGGTGTGCTCCTTCCCCAAGGGCCTaGCAAGCAAAGCGGCTACCCCGAAAGGCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: AIGTRCAPSPRA*QAKRLPRKARS
Trigger: GCTGCGGGCCTTTCGGGGTAGCCGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS GCA 72 bp CTCGTGGAAGTAGAACTTGAGCACCCAGCGATTGACTaGCTCTTCCAGCCGTGCCTCCCCCGCGCCGCGCTC +
Preference number: 6 (lower is better)
Translates to: LVEVELEHPAID*LFQPCLPRAAL
Trigger: GAGCGCGGCGCGGGGGAGGCACGGCTGGAAGAGGCAGTCAATCGCTGGGTGCTCAAGTTCTACTTCCACGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567296.6
ENST00000569280.1
CDS CAA 72 bp TTCTCTCCAGGGAGGGGTTGGTTGAGAACGGTGGGCTaGGATGGTGGCGCTGAAGCGGCCTCCTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: FSPGRGWLRTVG*DGGAEAASWEE
Trigger: CTCCTCCCAGGAGGCCGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567130.1
ENST00000569584.6
CDS CAA 90 bp TTGGGATTCTTCTCTCCAGGGAGGGGTTGGTTGAGAACGGTGGGCTaGGATGGTGGCGCTGAAGCGGCCTCCTGGGAGGAGTTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: LGFFSPGRGWLRTVG*DGGAEAASWEELRP
Trigger: AGGCCTCAACTCCTCCCAGGAGGCCGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567130.1
ENST00000569584.6
CDS GCA 72 bp AGACACTGCATAACCCGCAGCAATCGGGACACGGTGTaGTCCTTCCCCAAGGGCCTGACAAGCAAAGCCTGC +
Preference number: 6 (lower is better)
Translates to: RHCITRSNRDTV*SFPKGLTSKAC
Trigger: GCAGGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATTGCTGCGGGTTATGCAGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567296.6
ENST00000569611.6
CDS GCA 72 bp AGACACTGCATAACCCGCAGCAATCGGGACACGGTGTaGTCCTTCCCCAAGGGCCTGACAAGCAAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: RHCITRSNRDTV*SFPKGLTSKAG
Trigger: CCCAGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATTGCTGCGGGTTATGCAGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566750.5
CDS GCA 72 bp AGACACTGCATAACCCGCAGCAATCGGGACACGGTGTaGTCCTTCCCCAAGGGCCTGACAAGCAAAGCGGCT +
Preference number: 6 (lower is better)
Translates to: RHCITRSNRDTV*SFPKGLTSKAA
Trigger: AGCCGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATTGCTGCGGGTTATGCAGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569280.1
CDS CAA 90 bp CTCTGGCTGTCCTCCTCCAAGACCAATCTGCTTATTGTCATGCGCTaGTTCTTGGGCTGCAGTTCCGAGCCACCCTCACCGTCAGCCGGG +
Preference number: 6 (lower is better)
Translates to: LWLSSSKTNLLIVMR*FLGCSSEPPSPSAG
Trigger: CCCGGCTGACGGTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGGAGGACAGCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS CAA 90 bp CTGTCCTCCTCCAAGACCAATCTGCTTATTGTCATGCGCTTGTTCTaGGGCTGCAGTTCCGAGCCACCCTCACCGTCAGCCGGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: LSSSKTNLLIVMRLF*GCSSEPPSPSAGAE
Trigger: TTCAGCCCCGGCTGACGGTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGGAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS CAA 90 bp AGAAGGTCTTCATACTTGGGATTCTTCTCTCCAGGGAGGGGTTGGTaGAGAACGGTGGGCTTGGATGGTGGCGCTGAAGCGGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: RRSSYLGFFSPGRGW*RTVGLDGGAEAASW
Trigger: CCAGGAGGCCGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAAGTATGAAGACCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS TCA 72 bp GTACTTTGGGATTCTTCTCTCCAGGGAGGGGTTGGTTaGGAACGGTGGGCTTGGATGGTGGCGCTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: VLWDSSLQGGVG*ERWAWMVALKR
Trigger: CCGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000567130.1
CDS TCA 72 bp CATACTTGGGATTCTTCTCTCCAGGGAGGGGTTGGTTaGGAACGGTGGGCTTGGATGGTGGCGCTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: HTWDSSLQGGVG*ERWAWMVALKR
Trigger: CCGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAAGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS GCA 72 bp ACCAATCTGCTTATTGTCATGCGCTTGTTCTTGGGCTaGAGTTCCGAGCCACCCTCACCGTCAGCCGGGGCT +
Preference number: 6 (lower is better)
Translates to: TNLLIVMRLFLG*SSEPPSPSAGA
Trigger: AGCCCCGGCTGACGGTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS CAA 72 bp GGTACTTTGGGATTCTTCTCTCCAGGGAGGGGTTGGTaGAGAACGGTGGGCTTGGATGGTGGCGCTGAAGCG +
Preference number: 6 (lower is better)
Translates to: GTLGFFSPGRGW*RTVGLDGGAEA
Trigger: CGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAAAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000567130.1
CDS GCA 72 bp AGACACTGCATAACCCGCAGCAATCGGGACACGGTGTaGTCCTTCCCCAAGGGCCTGACAAGCAAAGCTTTC +
Preference number: 6 (lower is better)
Translates to: RHCITRSNRDTV*SFPKGLTSKAF
Trigger: GAAAGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATTGCTGCGGGTTATGCAGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567841.1
CDS CCA 72 bp CCAAGACCAATCTGCTTATTGTCATGCGCTTGTTCTTaGGCTGCAGTTCCGAGCCACCCTCACCGTCAGCCG +
Preference number: 6 (lower is better)
Translates to: PRPICLLSCACS*AAVPSHPHRQP
Trigger: CGGCTGACGGTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS CCA 72 bp TGGGAGGAGTTGAGGCCTGCGCTGGGCTCAGTACTCTaGCTGTCCTCCTCCAAGACCAATCTGCTTATTGTC +
Preference number: 6 (lower is better)
Translates to: WEELRPALGSVL*LSSSKTNLLIV
Trigger: GACAATAAGCAGATTGGTCTTGGAGGAGGACAGCCAGAGTACTGAGCCCAGCGCAGGCCTCAACTCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254942.8
ENST00000567130.1
ENST00000569584.6
CDS CAA 72 bp TCATACTTGGGATTCTTCTCTCCAGGGAGGGGTTGGTaGAGAACGGTGGGCTTGGATGGTGGCGCTGAAGCG +
Preference number: 6 (lower is better)
Translates to: SYLGFFSPGRGW*RTVGLDGGAEA
Trigger: CGCTTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAAGTATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS CAA 90 bp TGGGCTCAGTACTCTGGCTGTCCTCCTCCAAGACCAATCTGCTTATaGTCATGCGCTTGTTCTTGGGCTGCAGTTCCGAGCCACCCTCAC +
Preference number: 6 (lower is better)
Translates to: WAQYSGCPPPRPICL*SCACSWAAVPSHPH
Trigger: GTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGGAGGACAGCCAGAGTACTGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS CCA 72 bp TTGGGTACTTTGGGATTCTTCTCTCCAGGGAGGGGTTaGTTGAGAACGGTGGGCTTGGATGGTGGCGCTGAA +
Preference number: 6 (lower is better)
Translates to: LGTLGFFSPGRG*LRTVGLDGGAE
Trigger: TTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAAAGTACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000567130.1
CDS CAA 72 bp TCCAAGACCAATCTGCTTATTGTCATGCGCTTGTTCTaGGGCTGCAGTTCCGAGCCACCCTCACCGTCAGCC +
Preference number: 6 (lower is better)
Translates to: SKTNLLIVMRLF*GCSSEPPSPSA
Trigger: GGCTGACGGTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS CAA 72 bp TCCTCCTCCAAGACCAATCTGCTTATTGTCATGCGCTaGTTCTTGGGCTGCAGTTCCGAGCCACCCTCACCG +
Preference number: 6 (lower is better)
Translates to: SSSKTNLLIVMR*FLGCSSEPPSP
Trigger: CGGTGAGGGTGGCTCGGAACTGCAGCCCAAGAACAAGCGCATGACAATAAGCAGATTGGTCTTGGAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254942.8
ENST00000569584.6
CDS TCA 72 bp GCAATCGGGACACGGTGTGCTCCTTCCCCAAGGGCCTaGCAAGCAAAGCTTTCACAAGGGTGTTTTACAGCT +
Preference number: 6 (lower is better)
Translates to: AIGTRCAPSPRA*QAKLSQGCFTA
Trigger: AGCTGTAAAACACCCTTGTGAAAGCTTTGCTTGTCAGGCCCTTGGGGAAGGAGCACACCGTGTCCCGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567841.1
CDS CCA 72 bp TCTTCATACTTGGGATTCTTCTCTCCAGGGAGGGGTTaGTTGAGAACGGTGGGCTTGGATGGTGGCGCTGAA +
Preference number: 6 (lower is better)
Translates to: SSYLGFFSPGRG*LRTVGLDGGAE
Trigger: TTCAGCGCCACCATCCAAGCCCACCGTTCTCAACCAACCCCTCCCTGGAGAGAAGAATCCCAAGTATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569584.6
CDS GCA 72 bp TCTAAATTTTCCCCTTCTTCAATCCGCGACAGACACTaGATAACCCGCAGCAATCGGGACACGGTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: SKFSPSSIRDRH*ITRSNRDTVCS
Trigger: GGAGCACACCGTGTCCCGATTGCTGCGGGTTATGCAGTGTCTGTCGCGGATTGAAGAAGGGGAAAATTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254942.8
ENST00000566750.5
ENST00000567296.6
ENST00000567841.1
ENST00000569280.1
ENST00000569611.6
CDS GCA 72 bp TTGAGTAGGAAGAACCAGATCCTTCTGGTCCAGTTTTaGAAAGGCTGCCTCAGAATCCTGTGCACCAGACAG +
Preference number: 6 (lower is better)
Translates to: LSRKNQILLVQF*KGCLRILCTRQ
Trigger: CTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGGATCTGGTTCTTCCTACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254942.8
ENST00000566257.5
ENST00000566750.5
ENST00000569542.6
ENST00000569584.6
CDS GCA 72 bp AAGAACCAGATCCTTCTGGTCCAGTTTTGCAAAGGCTaGCTCAGAATCCTGTGCACCAGACAGAGTCTTGAA +
Preference number: 6 (lower is better)
Translates to: KNQILLVQFCKG*LRILCTRQSLE
Trigger: TTCAAGACTCTGTCTGGTGCACAGGATTCTGAGGCAGCCTTTGCAAAACTGGACCAGAAGGATCTGGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254942.8
ENST00000566257.5
ENST00000566750.5
ENST00000569542.6
ENST00000569584.6
CDS TCA 72 bp CAGGAAGCGCAGCATCTTCTGCTGGAAGGTCTCATATaGAAAGTTCTGGATAACAGGATGGGCCAAGTTCTT +
Preference number: 6 (lower is better)
Translates to: QEAQHLLLEGLI*KVLDNRMGQVL
Trigger: AAGAACTTGGCCCATCCTGTTATCCAGAACTTTTCATATGAGACCTTCCAGCAGAAGATGCTGCGCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254942.8
ENST00000564982.6
ENST00000566257.5
ENST00000566750.5
ENST00000567296.6
ENST00000569584.6
ENST00000569611.6
CDS CCA 72 bp TCACAAGGGTGTTTTACAGCTCTCTCTCTCTCTCCCTaGCCAAGGAAACATCTTCAGTCAGTTCTTCCACAA +
Preference number: 6 (lower is better)
Translates to: SQGCFTALSLSP*PRKHLQSVLPQ
Trigger: TTGTGGAAGAACTGACTGAAGATGTTTCCTTGGCCAGGGAGAGAGAGAGAGAGCTGTAAAACACCCTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567841.1