RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEPSIN (Homo sapiens)

Ensembl gene IDs: ENSG00000167302

Ensembl transcript IDs: ENST00000300714.7, ENST00000570854.1, ENST00000571094.1, ENST00000571115.1, ENST00000571601.1, ENST00000572050.1, ENST00000573295.5, ENST00000574517.1, ENST00000574944.1, ENST00000575891.1, ENST00000575961.1, ENST00000576090.5, ENST00000637944.2

Found 426 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAGGATCTTCAGCACCTTGAGCTTCCCGTGGCCGGAGCTGCTGTaGAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTGCCC +
Preference number: 1 (lower is better)
Translates to: SRIFSTLSFPWPELL*RRLRRYSSRHWLLP
Trigger: GGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAGCAGCTCCGGCCACGGGAAGCTCAAGGTGCTGAAGATCCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570854.1
3UTR CCA 90 bp CCGGAGCTGCTGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTaGCTGCTGCCCGGAGACTCGTGGGAGATTTTAGCAATCTCTTCA +
Preference number: 1 (lower is better)
Translates to: PELLCRRLRRYSSRH*LLPGDSWEILAISS
Trigger: TGAAGAGATTGCTAAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAGCAGCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570854.1
3UTR TCA 90 bp CAAGTCCAAATAGCCAGAGCCTCTGGCAGAGGAGATGGGGGAAACTaGGGTAGCCCTAGGGTCGTCCTCTCAAGTCAAGCTGCCTGGAGA +
Preference number: 1 (lower is better)
Translates to: QVQIARASGRGDGGN*GSPRVVLSSQAAWR
Trigger: TCTCCAGGCAGCTTGACTTGAGAGGACGACCCTAGGGCTACCTCAGTTTCCCCCATCTCCTCTGCCAGAGGCTCTGGCTATTTGGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR GCA 90 bp AGGGACTGCCCCCTGAGAGCCCTGAGATCGACATTTCTGAAGCCCTaGCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGA +
Preference number: 1 (lower is better)
Translates to: RDCPLRALRSTFLKP*HLPSLVGIQVQIAR
Trigger: TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAGAAATGTCGATCTCAGGGCTCTCAGGGGGCAGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR GCA 90 bp CTGCAGCAGGGTCCTCTCTCAACAGTCAGGGATGAACAGCAATGGTaGGTCCTTCTCTGTCCCTTCGAGACGTCTGTGTTCTCTGCAACC +
Preference number: 1 (lower is better)
Translates to: LQQGPLSTVRDEQQW*VLLCPFETSVFSAT
Trigger: GGTTGCAGAGAACACAGACGTCTCGAAGGGACAGAGAAGGACGCACCATTGCTGTTCATCCCTGACTGTTGAGAGAGGACCCTGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572050.1
3UTR CCA 90 bp AGGCTGCAGCAGGGTCCTCTCTCAACAGTCAGGGATGAACAGCAATaGTGCGTCCTTCTCTGTCCCTTCGAGACGTCTGTGTTCTCTGCA +
Preference number: 1 (lower is better)
Translates to: RLQQGPLSTVRDEQQ*CVLLCPFETSVFSA
Trigger: TGCAGAGAACACAGACGTCTCGAAGGGACAGAGAAGGACGCACCATTGCTGTTCATCCCTGACTGTTGAGAGAGGACCCTGCTGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572050.1
3UTR GCA 90 bp ATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTaGCCCCTGAGAGCCCTGAGATCGACATTTCTGAAGCCCTGCCAC +
Preference number: 1 (lower is better)
Translates to: IHTRNLMSESKTGRD*PLRALRSTFLKPCH
Trigger: GTGGCAGGGCTTCAGAAATGTCGATCTCAGGGCTCTCAGGGGGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR TCA 90 bp TTGCTGCTCATGACCTCCTGGGGAAGGAGGGAGCTGAGATCAAAATaGAATAAGGAACCTGGTAGTCGCTTCCGCATTCATACAAGAAAC +
Preference number: 1 (lower is better)
Translates to: LLLMTSWGRRELRSK*NKEPGSRFRIHTRN
Trigger: GTTTCTTGTATGAATGCGGAAGCGACTACCAGGTTCCTTATTTCATTTTGATCTCAGCTCCCTCCTTCCCCAGGAGGTCATGAGCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR TCA 90 bp GTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTTTCTaGGATGGACCAGAGGCTCCAATCAGAGGCTTCGTGTGTAGGAAG +
Preference number: 1 (lower is better)
Translates to: VYSESINPSALGRFF*DGPEAPIRGFVCRK
Trigger: CTTCCTACACACGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR TCA 90 bp GGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACCCCGGGCTGCCCATGCTaGGCTCCTGCAGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: GTGLDGIPDEGAGLRDETPGCPC*APAATA
Trigger: GGCCGTGGCTGCAGGAGCTCAGCATGGGCAGCCCGG...GGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
3UTR-3UTR CCA 90 bp GGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACCGCTGCGTGCATTCACTaGTCCCACGCAGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: GTGLDGIPDEGAGLRDETAACIH*SHAGGR
Trigger: CCTGCCACCTGCGTGGGACCAGTGAATGCACGCAGC...GGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
3UTR-3UTR GCA 90 bp GGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACCCACAGCGCCCTCAGCTaGGTGCATTCACTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: GTGLDGIPDEGAGLRDETHSALS*VHSLVP
Trigger: TGGGACCAGTGAATGCACGCAGCTGAGGGCGCTGTG...GGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
3UTR CAA 90 bp ACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACCGGGGTaGAACTCAGAGGCTGCAGGAAGACCTGGCTCCCAGGGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: TASQMREQGSGTRPG*NSEAAGRPGSQGEA
Trigger: TGCCTCTCCCTGGGAGCCAGGTCTTCCTGCAGCCTCTGAGTTCAACCCCGGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
3UTR-3UTR GCA 90 bp TGGGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACAGGAGGCCTCAAAGTaGCTCAGGATCTTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: WAQGWTASQMREQGSGTRQEASK*LRILVA
Trigger: GGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTG...TCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
3UTR-3UTR TCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGATGGGGGAAACTaGGGTAGCCCTAGGGTCGTC +
Preference number: 2 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGGDGGN*GSPRVV
Trigger: GACGACCCTAGGGCTACCTCAGTTTCCCCCATCTCC...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR GCA 90 bp ACAAGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTCCAGCAGGCACTGGCTaGTGCCCGGAGACTCGTGGG +
Preference number: 2 (lower is better)
Translates to: TSCSRAEDLGALQKLQLPPAGTG*CPETRG
Trigger: CCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGG...AGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
3UTR-3UTR GCA 90 bp TGCCCACAGGAGGCCTCAAAGTGCCTCAGGATCTTGGTGGCCTTGTTGGTCACACCCATGCTGAGCTCCTaGAGCCACGGCCGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: CPQEASKCLRILVALLVTPMLSS*SHGRVR
Trigger: CCGCACCCGGCCGTGGCTGCAGGAGCTCAGCATGGG...TGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTGTGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
3UTR-3UTR CCA 90 bp ATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGCTGCTCATGACCTCCTaGGGAAGGAGGGAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: MHQTQPQHLAHPDGTGEQLLMTS*GRRELR
Trigger: TCTCAGCTCCCTCCTTCCCCAGGAGGTCATGAGCAG...CTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR GCA 90 bp AGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGGGAGCTTCTGCAACCCAGGGGTaGCTCTCCAGGACCGGAGTC +
Preference number: 2 (lower is better)
Translates to: SPDTGHHHRTSPSGESGASATQG*LSRTGV
Trigger: GACTCCGGTCCTGGAGAGGCACCCCTGGGTTGCAGA...AGCTCCCGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572050.1
3UTR-3UTR CCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGCTGCTCATGACCTCCTaGGGAAGGAGGGAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGLLMTS*GRRELR
Trigger: TCTCAGCTCCCTCCTTCCCCAGGAGGTCATGAGCAG...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR TCA 90 bp TTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATGAAGGGATCTTCAGCACCTTaGGCTTCCCGTGGCCGGAGC +
Preference number: 2 (lower is better)
Translates to: FPCRGSGGPAKAAASWMKGSSAP*ASRGRS
Trigger: GCTCCGGCCACGGGAAGCTCAAGGTGCTGAAGATCC...CTTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
3UTR-3UTR GCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGCCTCTCAAGTCAAGCTaGCTGGAGACTGTAGCAGCT +
Preference number: 2 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLPLKSS*LETVAA
Trigger: AGCTGCTACAGTCTCCAGGCAGCTTGACTTGAGAGG...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR CCA 90 bp TTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATGAAGACCTTGAGCTTCCCGTaGCCGGAGCTGCTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: FPCRGSGGPAKAAASWMKTLSFP*PELLCR
Trigger: CCTGCACAGCAGCTCCGGCCACGGGAAGCTCAAGGT...CTTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
3UTR-3UTR CCA 90 bp CCCACAGGAGGCCTCAAAGTGCCTCAGGATCTTGGTGGCCTTGTTGGTCACAGGAGGAGGATGTGCTCCTaGGGGAGGAGGTCGCTGCTC +
Preference number: 2 (lower is better)
Translates to: PTGGLKVPQDLGGLVGHRRRMCS*GRRSLL
Trigger: GAGCAGCGACCTCCTCCCCCAGGAGCACATCCTCCT...CCTGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
3UTR-3UTR TCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGTGTAGCAGCTACGGTTaGGGCTGCTCAGGAAGCACA +
Preference number: 2 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWCSSYG*GCSGST
Trigger: TGTGCTTCCTGAGCAGCCTCAACCGTAGCTGCTACA...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR GCA 90 bp AGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGGGAGCTGACGTCTGTGTTCTCTaGAACCCAGGGGTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: SPDTGHHHRTSPSGESGADVCVL*NPGVPL
Trigger: GAGAGGCACCCCTGGGTTGCAGAGAACACAGACGTC...AGCTCCCGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572050.1
3UTR-3UTR TCA 90 bp CTCTTCAAACAGGTAGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGGGAGCTCTCACTGTTaGCATGGCCGGAGAGAGGAC +
Preference number: 2 (lower is better)
Translates to: LFKQVARTRDIIIGRPLQGSSHC*HGRRED
Trigger: GTCCTCTCTCCGGCCATGTCAACAGTGAGAGCTCCC...CTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGTTTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572050.1
3UTR-3UTR GCA 90 bp TTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATGAAGAGGAGGAGCCGTGGCTaGACAGATAGAGCAGGATCT +
Preference number: 2 (lower is better)
Translates to: FPCRGSGGPAKAAASWMKRRSRG*TDRAGS
Trigger: AGATCCTGCTCTATCTGTGCAGCCACGGCTCCTCCT...CTTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
3UTR-3UTR CCA 90 bp CCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATGAAGGCCTGCCCGGAGACTCGTaGGAGATTTTAGCAATCTCT +
Preference number: 2 (lower is better)
Translates to: PVQRIWGPCKSCSFLDEGLPGDS*EILAIS
Trigger: AGAGATTGCTAAAATCTCCCACGAGTCTCCGGGCAG...GCCTTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570854.1
3UTR-3UTR TCA 90 bp AGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGCCAGACAGCAGGAGATGGGGGAAACTaGGGTAGCCCTAGGGTCGTC +
Preference number: 2 (lower is better)
Translates to: REGSRRDLRLEMASGQTAGDGGN*GSPRVV
Trigger: GACGACCCTAGGGCTACCTCAGTTTCCCCCATCTCC...TGCTGTCTGGCCTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR TCA 90 bp AGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGCCAGACAGCAGCTTGTTGCTGCTCATaGCCTCCTGGGGAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: REGSRRDLRLEMASGQTAACCCS*PPGEGG
Trigger: CCCTCCTTCCCCAGGAGGTCATGAGCAGCAACAAGC...TGCTGTCTGGCCTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR GCA 90 bp AGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGCCAGACAGCACACCCTCAACCCACATaGACCAAACCCAGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: REGSRRDLRLEMASGQTAHPQPT*TKPSLS
Trigger: GCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGTG...TGCTGTCTGGCCTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR CCA 90 bp CTCTTCAAACAGGTAGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGAGGGATGAACAGCAATaGTGCGTCCTTCTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: LFKQVARTRDIIIGRPLQRDEQQ*CVLLCP
Trigger: GGGACAGAGAAGGACGCACCATTGCTGTTCATCCCT...CTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGTTTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572050.1
3UTR-3UTR TCA 90 bp AGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGCCAGACAGCATGTAGCAGCTACGGTTaGGGCTGCTCAGGAAGCACA +
Preference number: 2 (lower is better)
Translates to: REGSRRDLRLEMASGQTACSSYG*GCSGST
Trigger: TGTGCTTCCTGAGCAGCCTCAACCGTAGCTGCTACA...TGCTGTCTGGCCTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR TCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGAGCTGAGATCAAAATaGAATAAGGAACCTGGTAGT +
Preference number: 2 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWELRSK*NKEPGS
Trigger: ACTACCAGGTTCCTTATTTCATTTTGATCTCAGCTC...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR GCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGCCTCTCAAGTCAAGCTaGCTGGAGACTGTAGCAGCT +
Preference number: 2 (lower is better)
Translates to: EASCVGSNYSLKEQVRARPLKSS*LETVAA
Trigger: AGCTGCTACAGTCTCCAGGCAGCTTGACTTGAGAGG...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR TCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGAAGAAACCTCATGTCTaGGAGCAAGACAGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: EASCVGSNYSLKEQVRARKKPHV*EQDRQG
Trigger: TCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTT...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR TCA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTGCTTGTTGCTGCTCATaGCCTCCTGGGGAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: VNSSVYSESINPSALGRFACCCS*PPGEGG
Trigger: CCCTCCTTCCCCAGGAGGTCATGAGCAGCAACAAGC...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR CAA 90 bp TGGGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGAAGGATCTTGGTGGCCTaGTTGGTCACAGGTCCCGGG +
Preference number: 3 (lower is better)
Translates to: WAQGWTASQMREQGSGTRRILVA*LVTGPG
Trigger: CCCGGGACCTGTGACCAACAAGGCCACCAAGATCCT...TCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
3UTR GCA 72 bp TTCAGCACCTTGAGCTTCCCGTGGCCGGAGCTGCTGTaGAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGG +
Preference number: 3 (lower is better)
Translates to: FSTLSFPWPELL*RRLRRYSSRHW
Trigger: CCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAGCAGCTCCGGCCACGGGAAGCTCAAGGTGCTGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570854.1
3UTR TCA 72 bp CAAGTCAAGCTGCCTGGAGACTGTAGCAGCTACGGTTaGGGCTGCTCAGGAAGCACAGACCGCCCCAGACAG +
Preference number: 3 (lower is better)
Translates to: QVKLPGDCSSYG*GCSGSTDRPRQ
Trigger: CTGTCTGGGGCGGTCTGTGCTTCCTGAGCAGCCTCAACCGTAGCTGCTACAGTCTCCAGGCAGCTTGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR-3UTR CAA 90 bp CTTCAAACAGGTAGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGACGGGAGCTCTCACTGTaGACATGGCCGGAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: LQTGSPDTGHHHRTSPSGRELSL*TWPERG
Trigger: TCCTCTCTCCGGCCATGTCAACAGTGAGAGCTCCCG...TCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGTTTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572050.1
3UTR TCA 72 bp ATAGCCAGAGCCTCTGGCAGAGGAGATGGGGGAAACTaGGGTAGCCCTAGGGTCGTCCTCTCAAGTCAAGCT +
Preference number: 3 (lower is better)
Translates to: IARASGRGDGGN*GSPRVVLSSQA
Trigger: AGCTTGACTTGAGAGGACGACCCTAGGGCTACCTCAGTTTCCCCCATCTCCTCTGCCAGAGGCTCTGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR GCA 72 bp CCCCTGAGAGCCCTGAGATCGACATTTCTGAAGCCCTaGCACCTGCCATCCCTCGTAGGGATTCAAGTCCAA +
Preference number: 3 (lower is better)
Translates to: PLRALRSTFLKP*HLPSLVGIQVQ
Trigger: TTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAGAAATGTCGATCTCAGGGCTCTCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR GCA 72 bp AGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTaGCCCCTGAGAGCCCTGAGATCGACATTTCTGAAG +
Preference number: 3 (lower is better)
Translates to: RNLMSESKTGRD*PLRALRSTFLK
Trigger: CTTCAGAAATGTCGATCTCAGGGCTCTCAGGGGGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR GCA 72 bp GGTCCTCTCTCAACAGTCAGGGATGAACAGCAATGGTaGGTCCTTCTCTGTCCCTTCGAGACGTCTGTGTTC +
Preference number: 3 (lower is better)
Translates to: GPLSTVRDEQQW*VLLCPFETSVF
Trigger: GAACACAGACGTCTCGAAGGGACAGAGAAGGACGCACCATTGCTGTTCATCCCTGACTGTTGAGAGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572050.1
3UTR TCA 72 bp GAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTTTCTaGGATGGACCAGAGGCTCCAATCAGAGGCTTCGTG +
Preference number: 3 (lower is better)
Translates to: ESINPSALGRFF*DGPEAPIRGFV
Trigger: CACGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGCTGGGGTTTATGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
3UTR TCA 72 bp ATGACCTCCTGGGGAAGGAGGGAGCTGAGATCAAAATaGAATAAGGAACCTGGTAGTCGCTTCCGCATTCAT +
Preference number: 3 (lower is better)
Translates to: MTSWGRRELRSK*NKEPGSRFRIH
Trigger: ATGAATGCGGAAGCGACTACCAGGTTCCTTATTTCATTTTGATCTCAGCTCCCTCCTTCCCCAGGAGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp CGCTGCTCCCCAGGGAGGCGATGGCACACAGCGCCCTCAGCTGCGTGCATTCACCCGGGCTGCCCATGCTaGGCTCCTGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: RCSPGRRWHTAPSAACIHPGCPC*APAATA
Trigger: GGCCGTGGCTGCAGGAGCTCAGCATGGGCAGCCCGG...GTGAATGCACGCAGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGAGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp GGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACCCCCATGCTGAGCTCCTaGAGCCACGGCCGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GTGLDGIPDEGAGLRDETPMLSS*SHGRVR
Trigger: CCGCACCCGGCCGTGGCTGCAGGAGCTCAGCATGGG...GGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CCA 90 bp GGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACCCAGGTCAGATGGGCCTaGGAGGGCGGCTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTGLDGIPDEGAGLRDETQVRWA*EGGCGA
Trigger: GGCCCCACAGCCGCCCTCCCAGGCCCATCTGACCTG...GGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGCGGGGCGCATGGCGCTaGCCACCACCTCTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLRGAWR*PPPLRP
Trigger: AGGCCGCAGAGGTGGTGGCCAGCGCCATGCGCCCCG...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR TCA 90 bp CGCTGCTCCCCAGGGAGGCGATGGCACACAGCGCCCTCAGCTGCGTGCATTCACGGACGGCATCCCAGATaGGGGAGCAGGGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RCSPGRRWHTAPSAACIHGRHPR*GSRAPG
Trigger: TCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCC...GTGAATGCACGCAGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGAGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGTGGCCTGGGAGCCCATaGCTGTGGCAGGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLWPGSP*LWQAGS
Trigger: GGACCCCGCCTGCCACAGGCATGGGCTCCCAGGCCA...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGGGGGAGGAGGTCGCTaGTCCCCAGGGAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLGGGGR*SPGRRW
Trigger: CCATCGCCTCCCTGGGGAGCAGCGACCTCCTCCCCC...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CGGAGCTGCTGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTGCCCCAGGGTCTGGCTGTaGCCATCGCCCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: RSCCAGGSGGTPAGTGCCPRVWL*PSPLRS
Trigger: CGAGCGCAAGGGCGATGGGCACAGCCAGACCCTGGG...GCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAGCAGCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR GCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGAGGAAGGCTTCGCCTaGCGAGCCCGTGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLEEGFA*RARAAV
Trigger: CACGGCCGCACGGGCTCGGCAGGCGAAGCCTTCCTC...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR GCA 90 bp GCCGGAGCTGCTGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTGCAGGCACTGGCTGCTaGCCGGAGACTCGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: AGAAVQAAQEVLQQALAAAGTGC*PETRGR
Trigger: TCTCCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGC...AGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAGCAGCTCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR GCA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTCCAGCAGGCACTGGCTaGTGCCCGGAGACTCGTGGG +
Preference number: 4 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLPAGTG*CPETRG
Trigger: CCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGG...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CTGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTGCCCGGAGACTGGCCGGAGCTGCTGTaGAGGCGGCTCAGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LCRRLRRYSSRHWLLPGDWPELL*RRLRRY
Trigger: GTACCTCCTGAGCCGCCTGCACAGCAGCTCCGGCCA...GTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR GCA 90 bp ATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTCCCGTGGCCGGAGCTaGTGTGCAGGCGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: MHQTQPQHLAHPDGTGEQSRGRS*CAGGSG
Trigger: TCCTGAGCCGCCTGCACAGCAGCTCCGGCCACGGGA...CTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTGCTCCCCAAGTCCTaGGCGGCCGCGCGAACCTTC +
Preference number: 4 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLVLPKS*AAARTF
Trigger: GAAGGTTCGCGCGGCCGCGCAGGACTTGGGGAGCAC...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGGGAAGCAGGTCAGATGGGCCTaGGAGGGCGGCTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PDGTGEQWLVAAHDLLGKQVRWA*EGGCGA
Trigger: GGCCCCACAGCCGCCCTCCCAGGCCCATCTGACCTG...CTTCCCCAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGCTGGGGCCTCTCTTTaGGCTGTCCGTGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLAGASL*AVRAPW
Trigger: CCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGC...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp CTGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTGCCCGGAGACGGATCTTCAGCACCTTaGGCTTCCCGTGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LCRRLRRYSSRHWLLPGDGSSAP*ASRGRS
Trigger: GCTCCGGCCACGGGAAGCTCAAGGTGCTGAAGATCC...GTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR TCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGCTCCCGGCTGGCCCCTaGATGGCTGTCGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWLPAGP*MAVAAG
Trigger: TCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAG...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGACGGCATCCCAGATaGGGGAGCAGGGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGGRHPR*GSRAPG
Trigger: TCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCC...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp GGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACCGCACGGCCTCACAGTTaGGCAGTCCACACCTGCACA +
Preference number: 4 (lower is better)
Translates to: GTGLDGIPDEGAGLRDETARPHS*AVHTCT
Trigger: TGTGCAGGTGTGGACTGCTCAACTGTGAGGCCGTGC...GGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGCGCTGCCGGAATGACTaGCCGAGTCCGAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGRCRND*PSPRPC
Trigger: GCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCG...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGCCACCGCCTGCTTTCTaGCAGTCTGGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLPPPAF*QSGLGL
Trigger: GAGGCCGAGGCCAGACTGGCAGAAAGCAGGCGGTGG...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGGCTCCACGCACAGCTaGTGGGGCCTCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLGSTHS*WGLSLG
Trigger: GCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCC...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CTGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTGCCCGGAGACTACTCCAGCAGGCACTaGCTGCTGCCCGGAGACTCG +
Preference number: 4 (lower is better)
Translates to: LCRRLRRYSSRHWLLPGDYSSRH*LLPGDS
Trigger: CGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTA...GTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp TGGGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGAGCTCAGGAAGGCGCGTaGTCCCCGAGTCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: WAQGWTASQMREQGSGTRAQEGA*SPSHSP
Trigger: AGGACTGTGACTCGGGGACCACGCGCCTTCCTGAGC...TCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGCTGGTCCCACGCAGGTaGCAGGTCAGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLLVPRR*QVSSCS
Trigger: GCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAG...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp ATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGCTGGTCCCACGCAGGTaGCAGGTCAGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MHQTQPQHLAHPDGTGEQLVPRR*QVSSCS
Trigger: GCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAG...CTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CGCTGCTCCCCAGGGAGGCGATGGCACACAGCGCCCTCAGCTGCGTGCATTCACGCTGCGTGCATTCACTaGTCCCACGCAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RCSPGRRWHTAPSAACIHAACIH*SHAGGR
Trigger: CCTGCCACCTGCGTGGGACCAGTGAATGCACGCAGC...GTGAATGCACGCAGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGAGCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CCA 90 bp TGGGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGAAGGAGGATGTGCTCCTaGGGGAGGAGGTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: WAQGWTASQMREQGSGTRRRMCS*GRRSLL
Trigger: GAGCAGCGACCTCCTCCCCCAGGAGCACATCCTCCT...TCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CCA 90 bp GGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACCTCTTGGTGGCCTTGTTaGTCACAGGTCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTGLDGIPDEGAGLRDETSWWPC*SQVPGC
Trigger: GCAGCCCGGGACCTGTGACCAACAAGGCCACCAAGA...GGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CCA 90 bp TGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTGCCCGGAGACTGAGACGCAAGGTCAATaGCTCCGGCCCGGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: CAGGSGGTPAGTGCCPETETQGQ*LRPGAS
Trigger: ACTCGCCCCGGGCCGGAGCCATTGACCTTGCGTCTC...AGTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR TCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCGCGGCGCGGCAGCCATaGTCCAGGTCCCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLAARQP*SRSPPG
Trigger: ACCGGGAGGGGACCTGGATCATGGCTGCCGCGCCGC...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGCTGTCGCTGCCGGAATaGCTGCCCGAGTCCGAGACC +
Preference number: 4 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGLSLPE*LPESET
Trigger: GGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAG...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCCCGGGCTGCCCATGCTaGGCTCCTGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLPGCPC*APAATA
Trigger: GGCCGTGGCTGCAGGAGCTCAGCATGGGCAGCCCGG...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp TGGGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGAGGACGAGACCGGGGTTaGACTCAGAGGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: WAQGWTASQMREQGSGTRGRDRG*TQRLQE
Trigger: TTCCTGCAGCCTCTGAGTTCAACCCCGGTCTCGTCC...TCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGCAGGCACTGGCTGCTaGCCGGAGACTCGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGAGTGC*PETRGR
Trigger: TCTCCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGC...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGTGGCCGGAGCTGCTGTaGAGGCGGCTCAGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGWPELL*RRLRRY
Trigger: GTACCTCCTGAGCCGCCTGCACAGCAGCTCCGGCCA...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGGGAAGCCACCGCCTGCTTTCTaGCAGTCTGGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PDGTGEQWLVAAHDLLGKPPPAF*QSGLGL
Trigger: GAGGCCGAGGCCAGACTGGCAGAAAGCAGGCGGTGG...CTTCCCCAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGCCCGTGCAGAGGATCTaGGGGCCCTGCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGPVQRI*GPCKSC
Trigger: GCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGG...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGAGGAGGATGTGCTCCTaGGGGAGGAGGTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGRRMCS*GRRSLL
Trigger: GAGCAGCGACCTCCTCCCCCAGGAGCACATCCTCCT...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGCCTAGCCCACCCCGATaGGACGGGGGAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWPSPPR*DGGAVA
Trigger: AGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGG...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGCTGTCGCTGCCGGAATaGCTGCCCGAGTCCGAGACC +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWLSLPE*LPESET
Trigger: GGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAG...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGGACGAGACCGGGGTTaGACTCAGAGGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLGRDRG*TQRLQE
Trigger: TTCCTGCAGCCTCTGAGTTCAACCCCGGTCTCGTCC...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGGAGATGGGGGAAACTaGGGTAGCCCTAGGGTCGTC +
Preference number: 4 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLGDGGN*GSPRVV
Trigger: GACGACCCTAGGGCTACCTCAGTTTCCCCCATCTCC...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp CAAGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGCCCGTCGGAGGCCACTaGATGCTGGCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QAVPVQRIWGPCKSCSFLPVGGH*MLAEAC
Trigger: ACAGGCCTCGGCCAGCATTCAGTGGCCTCCGACGGG...CAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR TCA 90 bp GACTGGGAAGGGATGAGAACTGTGCTACTGGCCACAGGGAGGCTGCAGCAGGGTCCCGTCGGAGGCCACTaGATGCTGGCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: DWEGMRTVLLATGRLQQGPVGGH*MLAEAC
Trigger: ACAGGCCTCGGCCAGCATTCAGTGGCCTCCGACGGG...ACCCTGCTGCAGCCTCCCTGTGGCCAGTAGCACAGTTCTCATCCCTTCCCAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR GCA 90 bp CTGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTGCCCGGAGACTACAAGCTGTTCCCGTaGAGAGGATCTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LCRRLRRYSSRHWLLPGDYKLFP*RGSGGP
Trigger: AGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTA...GTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR GCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGTGGCAGGTCAGCAGCTaGAGCACGGCCTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLWQVSS*STASQL
Trigger: CAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCA...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCTGCTCCCCAGGGAGGCGATGGCACACAGCGCCCTCAGCTGCGTGCATTCACTTGGCAGGTCAGCAGCTaGAGCACGGCCTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: AAPQGGDGTQRPQLRAFTWQVSS*STASQL
Trigger: CAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCA...AGTGAATGCACGCAGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGCGCCCTCAGCTGCGTaGATTCACTGGTCCCACGCA +
Preference number: 4 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGAPSAA*IHWSHA
Trigger: TGCGTGGGACCAGTGAATGCACGCAGCTGAGGGCGC...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CCCACAGGAGGCCTCAAAGTGCCTCAGGATCTTGGTGGCCTTGTTGGTCACAGGGGGGGAGGAGGTCGCTaGTCCCCAGGGAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: PTGGLKVPQDLGGLVGHRGGGGR*SPGRRW
Trigger: CCATCGCCTCCCTGGGGAGCAGCGACCTCCTCCCCC...CCTGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTGTGGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp ATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGCAGGTCTCCACCGCCTaGTTTCTGCCAGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MHQTQPQHLAHPDGTGEQQVSTA*FLPVWP
Trigger: AGGCCAGACTGGCAGAAAGCAGGCGGTGGAGACCTG...CTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGTCTTTGGGCTGTCCGTaGCCCCTGGGATCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGSLGCP*PLGSVQ
Trigger: CTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGA...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTCTTTGGGCTGTCCGTaGCCCCTGGGATCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: MHQTQPQHLAHPDGTGEQSLGCP*PLGSVQ
Trigger: CTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGA...CTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GTACAAGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCGGCGAGTCCGGGGAATaGGGCGCTCGAGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: VQAVPVQRIWGPCKSCSFGESGE*GAREEP
Trigger: CGGCTCCTCTCGAGCGCCGCATTCCCCGGACTCGCC...GAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCGGGAGCCCATGCCTGTaGCAGGCGGGGTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLGSPCL*QAGSPE
Trigger: CTCTGGGGACCCCGCCTGCCACAGGCATGGGCTCCC...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGGGAAGGCTCAGGAAGGCGCGTaGTCCCCGAGTCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: PDGTGEQWLVAAHDLLGKAQEGA*SPSHSP
Trigger: AGGACTGTGACTCGGGGACCACGCGCCTTCCTGAGC...CTTCCCCAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGGGAAGGCTGTCCGTGCCCCCTaGGATCCGTTCAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PDGTGEQWLVAAHDLLGKAVRAP*DPFRSP
Trigger: TGGAGACCTGAACGGATCCCAGGGGGCACGGACAGC...CTTCCCCAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp TACAAGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTTGGAAGGCCCGGCTTaGAAGGCCCCGGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: YKLFPCRGSGGPAKAAASLEGPA*KAPGRR
Trigger: GCGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAA...GGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGCGGCCTTCTGGATGGTaGAGAGGAAGGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLRPSGW*RGRLRL
Trigger: CAGGCGAAGCCTTCCTCTCCACCATCCAGAAGGCCG...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR TCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGGATCTTCAGCACCTTaGGCTTCCCGTGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWGSSAP*ASRGRS
Trigger: GCTCCGGCCACGGGAAGCTCAAGGTGCTGAAGATCC...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GTACAAGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCTCCCGTGGCCGGAGCTaGTGTGCAGGCGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VQAVPVQRIWGPCKSCSFSRGRS*CAGGSG
Trigger: TCCTGAGCCGCCTGCACAGCAGCTCCGGCCACGGGA...GAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR GCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGTACAAGCTGTTCCCGTaGAGAGGATCTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGYKLFP*RGSGGP
Trigger: AGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTA...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGTGCGGCCGTGTTCCTTaGTGTAGCCGAAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGCGRVP*CSRNPG
Trigger: TCCAGGGTTTCGGCTACAGCAAGGAACACGGCCGCA...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGTGCGGCCGTGTTCCTTaGTGTAGCCGAAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLCGRVP*CSRNPG
Trigger: TCCAGGGTTTCGGCTACAGCAAGGAACACGGCCGCA...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGCTGAATGGCTGTCGCTaGCGGAATGACTGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGLNGCR*RNDCPS
Trigger: ACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAG...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GGCACAGGGCTGGACGGCATCCCAGATGAGGGAGCAGGGCTCCGGGACGAGACCTTTGATGAAGTGCTGTaGCTCCTCGCGGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GTGLDGIPDEGAGLRDETFDEVL*LLAAQE
Trigger: TTCCTGAGCCGCGAGGAGGCACAGCACTTCATCAAA...GGTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCCAGCCCTGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp GCTGCTCCCCAGGGAGGCGATGGCACACAGCGCCCTCAGCTGCGTGCATTCACTCACGCTTTGATGAAGTaGTGTGCCTCCTCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: AAPQGGDGTQRPQLRAFTHALMK*CASSRL
Trigger: GAGCCGCGAGGAGGCACAGCACTTCATCAAAGCGTG...AGTGAATGCACGCAGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGCGCCCTCAGCTGCGTaGATTCACTGGTCCCACGCA +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWAPSAA*IHWSHA
Trigger: TGCGTGGGACCAGTGAATGCACGCAGCTGAGGGCGC...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGCACAGCGCCCTCAGCTaGGTGCATTCACTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGHSALS*VHSLVP
Trigger: TGGGACCAGTGAATGCACGCAGCTGAGGGCGCTGTG...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ATGGGGGAAACTGAGGTAGCCCTAGGGTCGTCCTCTCAAGTCAAGCTGCCTGGACCCATGCTGAGCTCCTaGAGCCACGGCCGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: MGETEVALGSSSQVKLPGPMLSS*SHGRVR
Trigger: CCGCACCCGGCCGTGGCTGCAGGAGCTCAGCATGGG...TCCAGGCAGCTTGACTTGAGAGGACGACCCTAGGGCTACCTCAGTTTCCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTAGGCCACCAGCTCCATaGCAGCAAACAAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLRPPAP*QQTRSR
Trigger: GCGACTCCTTGTTTGCTGGCATGGAGCTGGTGGCCT...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTCACCCTCAACCCACATaGACCAAACCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLHPQPT*TKPSLS
Trigger: GCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGTG...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGCACCCTCAACCCACATaGACCAAACCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: MHQTQPQHLAHPDGTGEQHPQPT*TKPSLS
Trigger: GCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGTG...CTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp TTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATGAAGTGTGCCCATCGCCCTTaGGCTCGGCGGGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: FPCRGSGGPAKAAASWMKCAHRP*ARRVRL
Trigger: AAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACA...CTTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp ATGGGGGAAACTGAGGTAGCCCTAGGGTCGTCCTCTCAAGTCAAGCTGCCTGGAGGGAGCCCATGCCTGTaGCAGGCGGGGTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: MGETEVALGSSSQVKLPGGSPCL*QAGSPE
Trigger: CTCTGGGGACCCCGCCTGCCACAGGCATGGGCTCCC...TCCAGGCAGCTTGACTTGAGAGGACGACCCTAGGGCTACCTCAGTTTCCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGAGCCAGGAGGCTCTTTaGCTGCTGTCCTCTGGGACG +
Preference number: 4 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGSQEAL*LLSSGT
Trigger: CGTCCCAGAGGACAGCAGCCAAAGAGCCTCCTGGCT...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGAGGGTTGGGGGACCGTaGCTGGCTGAAGGCATCATG +
Preference number: 4 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGRVGGP*LAEGIM
Trigger: CATGATGCCTTCAGCCAGCCACGGTCCCCCAACCCT...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR TCA 90 bp CACTGGCTGCTGCCCGGAGACTCGTGGGAGATTTTAGCAATCTCTTCAAACAGGGCGGCGCGGCAGCCATaGTCCAGGTCCCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: HWLLPGDSWEILAISSNRAARQP*SRSPPG
Trigger: ACCGGGAGGGGACCTGGATCATGGCTGCCGCGCCGC...CCTGTTTGAAGAGATTGCTAAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR TCA 90 bp CCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGGGAAGAAGCTCAACTCCTGCTaGCAGTCACTCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PDGTGEQWLVAAHDLLGKKLNSC*QSLRAT
Trigger: GGTGGCCCTGAGTGACTGTCAGCAGGAGTTGAGCTT...CTTCCCCAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp CTGAAGCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGACCGGCCTGCCCAGGCTaGTGCCTCACAGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LKPCHLPSLVGIQVQIARPACPG*CLTARG
Trigger: TCCCCGAGCTGTGAGGCATCAGCCTGGGCAGGCCGG...TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR GCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCGGCTCCACGCACAGCTaGTGGGGCCTCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLGSTHS*WGLSLG
Trigger: GCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCC...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CAGGGAGGCTGCAGCAGGGTCCTCTCTCAACAGTCAGGGATGAACAGCAATGGTCCCAGGGTCTGGCTGTaGCCATCGCCCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: QGGCSRVLSQQSGMNSNGPRVWL*PSPLRS
Trigger: CGAGCGCAAGGGCGATGGGCACAGCCAGACCCTGGG...ACCATTGCTGTTCATCCCTGACTGTTGAGAGAGGACCCTGCTGCAGCCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR GCA 90 bp AGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATCTGCAACCCAGGGGTaGCTCTCCAGGACCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SCSRAEDLGALQKLQLPGSATQG*LSRTGV
Trigger: GACTCCGGTCCTGGAGAGGCACCCCTGGGTTGCAGA...TCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp CCCACAGGAGGCCTCAAAGTGCCTCAGGATCTTGGTGGCCTTGTTGGTCACAGGTCCCCAGGGAGGCGATaGCACACAGCGCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PTGGLKVPQDLGGLVGHRSPGRR*HTAPSA
Trigger: AGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGA...CCTGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCTCCCCAGGGAGGCGATaGCACACAGCGCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLSPGRR*HTAPSA
Trigger: AGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGA...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CGCTGCTCCCCAGGGAGGCGATGGCACACAGCGCCCTCAGCTGCGTGCATTCACAGTGCCTCAGGATCTTaGTGGCCTTGTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RCSPGRRWHTAPSAACIHSASGS*WPCWSQ
Trigger: CTGTGACCAACAAGGCCACCAAGATCCTGAGGCACT...GTGAATGCACGCAGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CCA 90 bp TCTCTTCAAACAGGTAGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCATTGGAAGGCCCGGCTTaGAAGGCCCCGGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: SLQTGSPDTGHHHRTSPSLEGPA*KAPGRR
Trigger: GCGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAA...TGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGTTTGAAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR CCA 90 bp TTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATGAAGCGTTCCCCCAGGGTCTaGCTGTGCCCATCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FPCRGSGGPAKAAASWMKRSPRV*LCPSPL
Trigger: CAAGGGCGATGGGCACAGCCAGACCCTGGGGGAACG...CTTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp ACAGGTAGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGCGTTCCCCCAGGGTCTaGCTGTGCCCATCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TGSPDTGHHHRTSPSGESRSPRV*LCPSPL
Trigger: CAAGGGCGATGGGCACAGCCAGACCCTGGGGGAACG...CGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR CCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGGGAGCCTCCGGGTACTaGGACTCTCGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASGASGY*DSRARG
Trigger: GCCCCGGGCCCGAGAGTCCCAGTACCCGGAGGCTCC...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR TCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGCTCCCGGCTGGCCCCTaGATGGCTGTCGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASLPAGP*MAVAAG
Trigger: TCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAG...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCCCGGGCTGCCCATGCTaGGCTCCTGCAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SAFIQETSCLRARQAGTAPGCPC*APAATA
Trigger: GGCCGTGGCTGCAGGAGCTCAGCATGGGCAGCCCGG...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp AGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGGGAGCTGGGAGCTCTCACTGTTaGCATGGCCGGAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SPDTGHHHRTSPSGESGAGSSHC*HGRRED
Trigger: GTCCTCTCTCCGGCCATGTCAACAGTGAGAGCTCCC...AGCTCCCGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR GCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGTACAAGCTGTTCCCGTaGAGAGGATCTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWYKLFP*RGSGGP
Trigger: AGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTA...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ATGGGGGAAACTGAGGTAGCCCTAGGGTCGTCCTCTCAAGTCAAGCTGCCTGGACGCTGCCGGAATGACTaGCCGAGTCCGAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: MGETEVALGSSSQVKLPGRCRND*PSPRPC
Trigger: GCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCG...TCCAGGCAGCTTGACTTGAGAGGACGACCCTAGGGCTACCTCAGTTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGCACGCTTTGATGAAGTaGTGTGCCTCCTCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWHALMK*CASSRL
Trigger: GAGCCGCGAGGAGGCACAGCACTTCATCAAAGCGTG...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CAGGTGAGAGCCAGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCACCCATGCTGAGCTCCTaGAGCCACGGCCGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: QVRAREGSRRDLRLEMASPMLSS*SHGRVR
Trigger: CCGCACCCGGCCGTGGCTGCAGGAGCTCAGCATGGG...TGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCTGGCTCTCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGCCTCTCAAGTCAAGCTaGCTGGAGACTGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGPLKSS*LETVAA
Trigger: AGCTGCTACAGTCTCCAGGCAGCTTGACTTGAGAGG...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGACATTTCTGAAGCCCTaGCACCTGCCATCCCTCGTA +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGTFLKP*HLPSLV
Trigger: TACGAGGGATGGCAGGTGGCAGGGCTTCAGAAATGT...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CAATGGTGCGTCCTTCTCTGTCCCTTCGAGACGTCTGTGTTCTCTGCAACCCAGTGTGCCCATCGCCCTTaGGCTCGGCGGGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: QWCVLLCPFETSVFSATQCAHRP*ARRVRL
Trigger: AAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACA...CTGGGTTGCAGAGAACACAGACGTCTCGAAGGGACAGAGAAGGACGCACCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR GCA 90 bp AGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATCGGAGGCCACTGAATaGTGGCCGAGGCCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: SCSRAEDLGALQKLQLPGSEATE*WPRPVR
Trigger: ACGAACAGGCCTCGGCCAGCATTCAGTGGCCTCCGA...TCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp ATAGAGCAGGATCTTCAGCACCTTGAGCTTCCCGTGGCCGGAGCTGCTGTGCAGACCTTGAGCTTCCCGTaGCCGGAGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: IEQDLQHLELPVAGAAVQTLSFP*PELLCR
Trigger: CCTGCACAGCAGCTCCGGCCACGGGAAGCTCAAGGT...CTGCACAGCAGCTCCGGCCACGGGAAGCTCAAGGTGCTGAAGATCCTGCTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp TGCCCACAGGAGGCCTCAAAGTGCCTCAGGATCTTGGTGGCCTTGTTGGTCACACTGGTCCCACGCAGGTaGCAGGTCAGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CPQEASKCLRILVALLVTLVPRR*QVSSCS
Trigger: GCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAG...TGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCTGCTTTCTGCCAGTCTaGCCTCGGCCTCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLCFLPV*PRPRWG
Trigger: ACCCCAGCGAGGCCGAGGCCAGACTGGCAGAAAGCA...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp TCTCTTCAAACAGGTAGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCATCGGCGGGTCCGGCTTaGAAGGCCCGGCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLQTGSPDTGHHHRTSPSSAGPA*KARLGR
Trigger: CCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGA...TGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGTTTGAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR TCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCGCGGCGCGGCAGCCATaGTCCAGGTCCCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGAARQP*SRSPPG
Trigger: ACCGGGAGGGGACCTGGATCATGGCTGCCGCGCCGC...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCCCGGCCTGCCCAGGCTaGTGCCTCACAGCCGTGCGG +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGPACPG*CLTAVR
Trigger: CCGCACGGCTGTGAGGCATCAGCCTGGGCAGGCCGG...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300714.7
CDS-3UTR TCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGGGACGGCATCCCAGATaGGGGAGCAGGGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASGRHPR*GSRAPG
Trigger: TCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTCC...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCGCTTGTTGCTGCTCATaGCCTCCTGGGGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLACCCS*PPGEGG
Trigger: CCCTCCTTCCCCAGGAGGTCATGAGCAGCAACAAGC...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp ATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGGATCACGTAGGGATCTaGGACTTGAAATGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: MHQTQPQHLAHPDGTGEQDHVGI*DLKWPQ
Trigger: CTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATC...CTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGCTTGGAAGGTTTTTCTaGGATGGACCAGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLLGRFF*DGPEAP
Trigger: TGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAG...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGTCCCGTGGCCGGAGCTaGTGTGCAGGCGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: EASCVGSNYSLKEQVRARSRGRS*CAGGSG
Trigger: TCCTGAGCCGCCTGCACAGCAGCTCCGGCCACGGGA...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCTGGCCTGGGAGCCCATaGCTGTGGCAGGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SAFIQETSCLRARQAGTAWPGSP*LWQAGS
Trigger: GGACCCCGCCTGCCACAGGCATGGGCTCCCAGGCCA...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp TGCCCACAGGAGGCCTCAAAGTGCCTCAGGATCTTGGTGGCCTTGTTGGTCACAGCGCCCTCAGCTGCGTaGATTCACTGGTCCCACGCA +
Preference number: 4 (lower is better)
Translates to: CPQEASKCLRILVALLVTAPSAA*IHWSHA
Trigger: TGCGTGGGACCAGTGAATGCACGCAGCTGAGGGCGC...TGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTGTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGAGGAGGCTCTTTGGCTaGTGTCCTCTGGGACGATGT +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWRRLFG*CPLGRC
Trigger: ACATCGTCCCAGAGGACAGCAGCCAAAGAGCCTCCT...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCCACAGGGAGGCTGCAGCAGGGTCCTCTCTCAACAGTCAGGGATGAACAGCAATCGGAGGCCACTGAATaGTGGCCGAGGCCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: ATGRLQQGPLSTVRDEQQSEATE*WPRPVR
Trigger: ACGAACAGGCCTCGGCCAGCATTCAGTGGCCTCCGA...TTGCTGTTCATCCCTGACTGTTGAGAGAGGACCCTGCTGCAGCCTCCCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR GCA 90 bp CAGGGAGGCTGCAGCAGGGTCCTCTCTCAACAGTCAGGGATGAACAGCAATGGTTCTGCAACCCAGGGGTaGCTCTCCAGGACCGGAGTC +
Preference number: 4 (lower is better)
Translates to: QGGCSRVLSQQSGMNSNGSATQG*LSRTGV
Trigger: GACTCCGGTCCTGGAGAGGCACCCCTGGGTTGCAGA...ACCATTGCTGTTCATCCCTGACTGTTGAGAGAGGACCCTGCTGCAGCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR GCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGCGCCTGCCGAGCCCGTaGGGCCGTGTTCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASRLPSP*GRVPCC
Trigger: ACAGCAAGGAACACGGCCGCACGGGCTCGGCAGGCG...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR CCA 90 bp ATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGCTGCCCGGAGACTCGTaGGAGATTTTAGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: MHQTQPQHLAHPDGTGEQLPGDS*EILAIS
Trigger: AGAGATTGCTAAAATCTCCCACGAGTCTCCGGGCAG...CTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTCTGCCCGGAGACTCGTaGGAGATTTTAGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLLPGDS*EILAIS
Trigger: AGAGATTGCTAAAATCTCCCACGAGTCTCCGGGCAG...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTAAAGCTGCAGCTTCCTaGATGAAGGCAGAGTTGCGT +
Preference number: 4 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLKAAAS*MKAELR
Trigger: ACGCAACTCTGCCTTCATCCAGGAAGCTGCAGCTTT...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCCACCCGGCTCCCGGCTaGCCCCTGAATGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: SAFIQETSCLRARQAGTAHPAPG*PLNGCR
Trigger: GCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTG...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGCCTAGCCCACCCCGATaGGACGGGGGAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: EASCVGSNYSLKEQVRARPSPPR*DGGAVA
Trigger: AGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGG...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CACTGGCTGCTGCCCGGAGACTCGTGGGAGATTTTAGCAATCTCTTCAAACAGGTCGGCGGGTCCGGCTTaGAAGGCCCGGCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HWLLPGDSWEILAISSNRSAGPA*KARLGR
Trigger: CCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGA...CCTGTTTGAAGAGATTGCTAAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp GTACAAGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCGAGGCCACTGAATGCTaGCCGAGGCCTGTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: VQAVPVQRIWGPCKSCSFEATEC*PRPVRS
Trigger: GGAACGAACAGGCCTCGGCCAGCATTCAGTGGCCTC...GAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR GCA 90 bp CTCGTGGGAGATTTTAGCAATCTCTTCAAACAGGTAGCCCGGACACGGGACATCCCAGCAGGCACTGGCTaGTGCCCGGAGACTCGTGGG +
Preference number: 4 (lower is better)
Translates to: LVGDFSNLFKQVARTRDIPAGTG*CPETRG
Trigger: CCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGG...GATGTCCCGTGTCCGGGCTACCTGTTTGAAGAGATTGCTAAAATCTCCCACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR GCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGTGGCCGGAGCTGCTGTaGAGGCGGCTCAGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASWPELL*RRLRRY
Trigger: GTACCTCCTGAGCCGCCTGCACAGCAGCTCCGGCCA...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CTGAAGCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGATGTCCGAGAACAGGGTaGTCCCCAAGTCCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: LKPCHLPSLVGIQVQIARCPRTG*SPSPAR
Trigger: CCGCGCAGGACTTGGGGAGCACCCTGTTCTCGGACA...TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCGGGGGAGGAGGTCGCTaGTCCCCAGGGAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGGGGGR*SPGRRW
Trigger: CCATCGCCTCCCTGGGGAGCAGCGACCTCCTCCCCC...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CCCACAGGAGGCCTCAAAGTGCCTCAGGATCTTGGTGGCCTTGTTGGTCACAGGCAGGAGGCCTCAAAGTaGCTCAGGATCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PTGGLKVPQDLGGLVGHRQEASK*LRILVA
Trigger: GGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTG...CCTGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR GCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCAGGCCACCAGCTCCATaGCAGCAAACAAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLRPPAP*QQTRSR
Trigger: GCGACTCCTTGTTTGCTGGCATGGAGCTGGTGGCCT...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ACAGGTAGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGGACGTCTGTGTTCTCTaGAACCCAGGGGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TGSPDTGHHHRTSPSGESDVCVL*NPGVPL
Trigger: GAGAGGCACCCCTGGGTTGCAGAGAACACAGACGTC...CGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR CCA 90 bp CTGAAGCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGACCCGTGCAGAGGATCTaGGGGCCCTGCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKPCHLPSLVGIQVQIARPVQRI*GPCKSC
Trigger: GCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGG...TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCCACCCGGCTCCCGGCTaGCCCCTGAATGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGHPAPG*PLNGCR
Trigger: GCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTG...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CTGAAGCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCTGCGTGCATTCACTaGTCCCACGCAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKPCHLPSLVGIQVQIARAACIH*SHAGGR
Trigger: CCTGCCACCTGCGTGGGACCAGTGAATGCACGCAGC...TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGAAGAAACCTCATGTCTaGGAGCAAGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWKKPHV*EQDRQG
Trigger: TCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTT...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGATCACGTAGGGATCTaGGACTTGAAATGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWDHVGI*DLKWPQ
Trigger: CTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATC...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCGGGACCGTGGCTGGCTaGAGGCATCATGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SAFIQETSCLRARQAGTAGTVAG*RHHGRL
Trigger: CAGCCTGCCATGATGCCTTCAGCCAGCCACGGTCCC...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR TCA 90 bp ACAGGTAGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGAGGACTGGGAAGGGATaGGAACTGTGCTACTGGCCA +
Preference number: 4 (lower is better)
Translates to: TGSPDTGHHHRTSPSGESRTGKG*ELCYWP
Trigger: TGGCCAGTAGCACAGTTCTCATCCCTTCCCAGTCCT...CGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR GCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCAGGAGGAGCCGTGGCTaGACAGATAGAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLRRSRG*TDRAGS
Trigger: AGATCCTGCTCTATCTGTGCAGCCACGGCTCCTCCT...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGTGTCCGAGAACAGGGTaGTCCCCAAGTCCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASCPRTG*SPSPAR
Trigger: CCGCGCAGGACTTGGGGAGCACCCTGTTCTCGGACA...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGCCGAGTCCGAGACCCTaGTCAGGTCGCTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASPSPRP*SGRCSG
Trigger: CCCAGAACAGCGACCTGAGCAGGGTCTCGGACTCGG...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCCACCTCGACCCTTTCTaGCAGGTCACCCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SAFIQETSCLRARQAGTAHLDPF*QVTRLP
Trigger: CGGGAGCCGGGTGACCTGGCAGAAAGGGTCGAGGTG...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp ATGGGGGAAACTGAGGTAGCCCTAGGGTCGTCCTCTCAAGTCAAGCTGCCTGGACACGCTTTGATGAAGTaGTGTGCCTCCTCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: MGETEVALGSSSQVKLPGHALMK*CASSRL
Trigger: GAGCCGCGAGGAGGCACAGCACTTCATCAAAGCGTG...TCCAGGCAGCTTGACTTGAGAGGACGACCCTAGGGCTACCTCAGTTTCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CTGAAGCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGATGGCAGGTCAGCAGCTaGAGCACGGCCTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: LKPCHLPSLVGIQVQIARWQVSS*STASQL
Trigger: CAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCA...TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp AGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGAGAATCGGGAGAATGGTaGGTCCTTCTCTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SCSRAEDLGALQKLQLPGESGEW*VLLCPF
Trigger: GAAGGGACAGAGAAGGACGCACCATTCTCCCGATTC...TCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGTACTCCAGCAGGCACTaGCTGCTGCCCGGAGACTCG +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASYSSRH*LLPGDS
Trigger: CGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTA...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGAAAGCTGCAGCTTCCTaGATGAAGGCAGAGTTGCGT +
Preference number: 4 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWKAAAS*MKAELR
Trigger: ACGCAACTCTGCCTTCATCCAGGAAGCTGCAGCTTT...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCTCCCCAGGGAGGCGATaGCACACAGCGCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SAFIQETSCLRARQAGTASPGRR*HTAPSA
Trigger: AGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGA...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp AGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGCCAGACAGCAAGGAGGATGTGCTCCTaGGGGAGGAGGTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: REGSRRDLRLEMASGQTARRMCS*GRRSLL
Trigger: GAGCAGCGACCTCCTCCCCCAGGAGCACATCCTCCT...TGCTGTCTGGCCTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGGCTGTCCGTGCCCCCTaGGATCCGTTCAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASAVRAP*DPFRSP
Trigger: TGGAGACCTGAACGGATCCCAGGGGGCACGGACAGC...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GCTCCAATCAGAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGCTGGGGCCTCTCTTTaGGCTGTCCGTGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: APIRGFVCRKQLQPKGAGAGASL*AVRAPW
Trigger: CCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGC...ACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTCTGATTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CAGGTGAGAGCCAGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCACTCTGGGACGATGTTTaGGGGGCGCGGGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: QVRAREGSRRDLRLEMASLWDDV*GARGAS
Trigger: TGATGCTCCCCGCGCCCCCCAAACATCGTCCCAGAG...TGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCTGGCTCTCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CTGAAGCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAAGCCAGGAGGCTCTTTaGCTGCTGTCCTCTGGGACG +
Preference number: 4 (lower is better)
Translates to: LKPCHLPSLVGIQVQIARSQEAL*LLSSGT
Trigger: CGTCCCAGAGGACAGCAGCCAAAGAGCCTCCTGGCT...TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CAATGGTGCGTCCTTCTCTGTCCCTTCGAGACGTCTGTGTTCTCTGCAACCCAGGAGGCCACTGAATGCTaGCCGAGGCCTGTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: QWCVLLCPFETSVFSATQEATEC*PRPVRS
Trigger: GGAACGAACAGGCCTCGGCCAGCATTCAGTGGCCTC...CTGGGTTGCAGAGAACACAGACGTCTCGAAGGGACAGAGAAGGACGCACCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR TCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGGGAGATGGGGGAAACTaGGGTAGCCCTAGGGTCGTC +
Preference number: 4 (lower is better)
Translates to: EASCVGSNYSLKEQVRARGDGGN*GSPRVV
Trigger: GACGACCCTAGGGCTACCTCAGTTTCCCCCATCTCC...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGGATGCCTCACAGCCGTaGGGCCGTGTTCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASDASQP*GRVPCC
Trigger: ACAGCAAGGAACACGGCCGCACGGCTGTGAGGCATC...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300714.7
CDS-3UTR GCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCCACCTCGACCCTTTCTaGCAGGTCACCCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGHLDPF*QVTRLP
Trigger: CGGGAGCCGGGTGACCTGGCAGAAAGGGTCGAGGTG...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCTTTGATGAAGTGCTGTaGCTCCTCGCGGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLFDEVL*LLAAQE
Trigger: TTCCTGAGCCGCGAGGAGGCACAGCACTTCATCAAA...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGCACAGCGCCCTCAGCTaGGTGCATTCACTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASHSALS*VHSLVP
Trigger: TGGGACCAGTGAATGCACGCAGCTGAGGGCGCTGTG...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CAGGTGAGAGCCAGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCACAGGTCTCCACCGCCTaGTTTCTGCCAGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QVRAREGSRRDLRLEMASQVSTA*FLPVWP
Trigger: AGGCCAGACTGGCAGAAAGCAGGCGGTGGAGACCTG...TGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCTGGCTCTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CTCGTGGGAGATTTTAGCAATCTCTTCAAACAGGTAGCCCGGACACGGGACATCCCCGTGCAGAGGATCTaGGGGCCCTGCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVGDFSNLFKQVARTRDIPVQRI*GPCKSC
Trigger: GCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGG...GATGTCCCGTGTCCGGGCTACCTGTTTGAAGAGATTGCTAAAATCTCCCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGGCCGCGCGAACCTTCTaGTACAAGCTGTTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: EASCVGSNYSLKEQVRARAARTF*YKLFPC
Trigger: GCACGGGAACAGCTTGTACCAGAAGGTTCGCGCGGC...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGTCTTGGTGGCCTTGTTaGTCACAGGTCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EASCVGSNYSLKEQVRARSWWPC*SQVPGC
Trigger: GCAGCCCGGGACCTGTGACCAACAAGGCCACCAAGA...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGTCCACGCACAGCTGCTaGGGCCTCTCTTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASSTHSC*GLSLGC
Trigger: ACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGA...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CTGAAGCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGACTGCTCATGACCTCCTaGGGAAGGAGGGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LKPCHLPSLVGIQVQIARLLMTS*GRRELR
Trigger: TCTCAGCTCCCTCCTTCCCCAGGAGGTCATGAGCAG...TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGGGGACGGGGGAGCAGTaGCTTGTTGCTGCTCATGAC +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASGTGEQ*LVAAHD
Trigger: GTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCC...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CAGGTGAGAGCCAGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGGACGGGGGAGCAGTaGCTTGTTGCTGCTCATGAC +
Preference number: 4 (lower is better)
Translates to: QVRAREGSRRDLRLEMASGTGEQ*LVAAHD
Trigger: GTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCC...TGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCTGGCTCTCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGAAGGTTTTTCTGAGATaGACCAGAGGCTCCAATCAG +
Preference number: 4 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGKVFLR*TRGSNQ
Trigger: CTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTT...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp AGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGCCAGACAGCATTGGGGGACCGTGGCTaGCTGAAGGCATCATGGCAG +
Preference number: 4 (lower is better)
Translates to: REGSRRDLRLEMASGQTALGDRG*LKASWQ
Trigger: CTGCCATGATGCCTTCAGCCAGCCACGGTCCCCCAA...TGCTGTCTGGCCTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR TCA 90 bp ACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCTGAGATCAAAATaGAATAAGGAACCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: THMHQTQPQHLAHPDGTGELRSK*NKEPGS
Trigger: ACTACCAGGTTCCTTATTTCATTTTGATCTCAGCTC...CCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGCTGAATGGCTGTCGCTaGCGGAATGACTGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: EASCVGSNYSLKEQVRARLNGCR*RNDCPS
Trigger: ACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAG...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGCAGGAGGCCTCAAAGTaGCTCAGGATCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EASCVGSNYSLKEQVRARQEASK*LRILVA
Trigger: GGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTG...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp AGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGCCAGACAGCACAGGAGGCCTCAAAGTaGCTCAGGATCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: REGSRRDLRLEMASGQTAQEASK*LRILVA
Trigger: GGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTG...TGCTGTCTGGCCTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CACTGGCTGCTGCCCGGAGACTCGTGGGAGATTTTAGCAATCTCTTCAAACAGGGACGTCTGTGTTCTCTaGAACCCAGGGGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: HWLLPGDSWEILAISSNRDVCVL*NPGVPL
Trigger: GAGAGGCACCCCTGGGTTGCAGAGAACACAGACGTC...CCTGTTTGAAGAGATTGCTAAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR GCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCGCTGGCCACCACCTCTaGGGCCTTCTGGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGAGHHL*GLLDGG
Trigger: TCCACCATCCAGAAGGCCGCAGAGGTGGTGGCCAGC...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR CCA 90 bp GCTCCAATCAGAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTACCTTGAGCTTCCCGTaGCCGGAGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: APIRGFVCRKQLQPKGAGTLSFP*PELLCR
Trigger: CCTGCACAGCAGCTCCGGCCACGGGAAGCTCAAGGT...ACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTCTGATTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GTACAAGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCAAAGCTGCAGCTTCCTaGATGAAGGCAGAGTTGCGT +
Preference number: 4 (lower is better)
Translates to: VQAVPVQRIWGPCKSCSFKAAAS*MKAELR
Trigger: ACGCAACTCTGCCTTCATCCAGGAAGCTGCAGCTTT...GAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCGCTGCGTGCATTCACTaGTCCCACGCAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGAACIH*SHAGGR
Trigger: CCTGCCACCTGCGTGGGACCAGTGAATGCACGCAGC...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp ATGGGGGAAACTGAGGTAGCCCTAGGGTCGTCCTCTCAAGTCAAGCTGCCTGGAAGTGCCTCAGGATCTTaGTGGCCTTGTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: MGETEVALGSSSQVKLPGSASGS*WPCWSQ
Trigger: CTGTGACCAACAAGGCCACCAAGATCCTGAGGCACT...TCCAGGCAGCTTGACTTGAGAGGACGACCCTAGGGCTACCTCAGTTTCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCTGCTTTCTGCCAGTCTaGCCTCGGCCTCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGCFLPV*PRPRWG
Trigger: ACCCCAGCGAGGCCGAGGCCAGACTGGCAGAAAGCA...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCTCCACGCACAGCTGCTaGGGCCTCTCTTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SAFIQETSCLRARQAGTASTHSC*GLSLGC
Trigger: ACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGA...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CTTCAAACAGGTAGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGAAGGGATGAACAGCAATaGTGCGTCCTTCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LQTGSPDTGHHHRTSPSGRDEQQ*CVLLCP
Trigger: GGGACAGAGAAGGACGCACCATTGCTGTTCATCCCT...TCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCTACCTGTTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR GCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGAGGAGGAGCCGTGGCTaGACAGATAGAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: EASCVGSNYSLKEQVRARRRSRG*TDRAGS
Trigger: AGATCCTGCTCTATCTGTGCAGCCACGGCTCCTCCT...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp CACTGGCTGCTGCCCGGAGACTCGTGGGAGATTTTAGCAATCTCTTCAAACAGGAGGAGGAGCCGTGGCTaGACAGATAGAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: HWLLPGDSWEILAISSNRRRSRG*TDRAGS
Trigger: AGATCCTGCTCTATCTGTGCAGCCACGGCTCCTCCT...CCTGTTTGAAGAGATTGCTAAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp GCTCCAATCAGAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGCCGCGCGAACCTTCTaGTACAAGCTGTTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: APIRGFVCRKQLQPKGAGAARTF*YKLFPC
Trigger: GCACGGGAACAGCTTGTACCAGAAGGTTCGCGCGGC...ACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTCTGATTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCTCTTGGTGGCCTTGTTaGTCACAGGTCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGSWWPC*SQVPGC
Trigger: GCAGCCCGGGACCTGTGACCAACAAGGCCACCAAGA...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GCTCCAATCAGAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTCTGCGGCCTTCTGGATaGTGGAGAGGAAGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: APIRGFVCRKQLQPKGAGLRPSG*WRGRLR
Trigger: GCGAAGCCTTCCTCTCCACCATCCAGAAGGCCGCAG...ACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTCTGATTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR CCA 90 bp CAGGTGAGAGCCAGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCATGGCTGAAGGCATCATaGCAGGCTGGTAGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: QVRAREGSRRDLRLEMASWLKAS*QAGRCH
Trigger: GTGACACCTACCAGCCTGCCATGATGCCTTCAGCCA...TGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCTGGCTCTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR TCA 90 bp GCTCCAATCAGAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTAAGCTCAACTCCTGCTaGCAGTCACTCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: APIRGFVCRKQLQPKGAGKLNSC*QSLRAT
Trigger: GGTGGCCCTGAGTGACTGTCAGCAGGAGTTGAGCTT...ACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTCTGATTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp ATGGGGGAAACTGAGGTAGCCCTAGGGTCGTCCTCTCAAGTCAAGCTGCCTGGAGGGGAAGGAGGGAGCTaGGATCAAAATGAAATAAGG +
Preference number: 4 (lower is better)
Translates to: MGETEVALGSSSQVKLPGGEGGS*DQNEIR
Trigger: CCTTATTTCATTTTGATCTCAGCTCCCTCCTTCCCC...TCCAGGCAGCTTGACTTGAGAGGACGACCCTAGGGCTACCTCAGTTTCCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp CTGAAGCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGACTTGGAAGGTTTTTCTaGGATGGACCAGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LKPCHLPSLVGIQVQIARLGRFF*DGPEAP
Trigger: TGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAG...TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GCTCCAATCAGAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTCTGCTCATGACCTCCTaGGGAAGGAGGGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: APIRGFVCRKQLQPKGAGLLMTS*GRRELR
Trigger: TCTCAGCTCCCTCCTTCCCCAGGAGGTCATGAGCAG...ACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTCTGATTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGAAGAAACCTCATGTCTaGGAGCAAGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASKKPHV*EQDRQG
Trigger: TCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTT...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTGTGCTCCCCAAGTCCTaGGCGGCCGCGCGAACCTTC +
Preference number: 4 (lower is better)
Translates to: VNSSVYSESINPSALGRFVLPKS*AAARTF
Trigger: GAAGGTTCGCGCGGCCGCGCAGGACTTGGGGAGCAC...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCTCCAATCAGAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTAGGAGGCTCTTTGGCTaGTGTCCTCTGGGACGATGT +
Preference number: 4 (lower is better)
Translates to: APIRGFVCRKQLQPKGAGRRLFG*CPLGRC
Trigger: ACATCGTCCCAGAGGACAGCAGCCAAAGAGCCTCCT...ACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTCTGATTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTGCAGGCACTGGCTGCTaGCCGGAGACTCGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VNSSVYSESINPSALGRFAGTGC*PETRGR
Trigger: TCTCCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGC...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GCTCCAATCAGAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTTTTGATGAAGTGCTGTaGCTCCTCGCGGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: APIRGFVCRKQLQPKGAGFDEVL*LLAAQE
Trigger: TTCCTGAGCCGCGAGGAGGCACAGCACTTCATCAAA...ACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTCTGATTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCACATTTCTGAAGCCCTaGCACCTGCCATCCCTCGTA +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGTFLKP*HLPSLV
Trigger: TACGAGGGATGGCAGGTGGCAGGGCTTCAGAAATGT...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp CTCGTGGGAGATTTTAGCAATCTCTTCAAACAGGTAGCCCGGACACGGGACATCCTGCCCGGAGACTCGTaGGAGATTTTAGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: LVGDFSNLFKQVARTRDILPGDS*EILAIS
Trigger: AGAGATTGCTAAAATCTCCCACGAGTCTCCGGGCAG...GATGTCCCGTGTCCGGGCTACCTGTTTGAAGAGATTGCTAAAATCTCCCACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CCA 90 bp GAGGCTTCGTGTGTAGGAAGCAATTACAGCCTAAAGGAGCAGGTGAGAGCCAGGAAACCCCAGCGCTCTTaGAAGGTTTTTCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: EASCVGSNYSLKEQVRARKPQRS*KVFLRW
Trigger: CCATCTCAGAAAAACCTTCCAAGAGCGCTGGGGTTT...CCTGGCTCTCACCTGCTCCTTTAGGCTGTAATTGCTTCCTACACACGAAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCGGGGAAGGAGGGAGCTaGGATCAAAATGAAATAAGG +
Preference number: 4 (lower is better)
Translates to: SAFIQETSCLRARQAGTAGEGGS*DQNEIR
Trigger: CCTTATTTCATTTTGATCTCAGCTCCCTCCTTCCCC...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTCCGAGTCCGAGACCCTaGTCAGGTCGCTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VNSSVYSESINPSALGRFPSPRP*SGRCSG
Trigger: CCCAGAACAGCGACCTGAGCAGGGTCTCGGACTCGG...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTACCTTGAGCTTCCCGTaGCCGGAGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VNSSVYSESINPSALGRFTLSFP*PELLCR
Trigger: CCTGCACAGCAGCTCCGGCCACGGGAAGCTCAAGGT...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTCTCTGGGACGATGTTTaGGGGGCGCGGGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: VNSSVYSESINPSALGRFLWDDV*GARGAS
Trigger: TGATGCTCCCCGCGCCCCCCAAACATCGTCCCAGAG...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp AGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGCCAGACAGCAAAGGTTTTTCTGAGATaGACCAGAGGCTCCAATCAG +
Preference number: 4 (lower is better)
Translates to: REGSRRDLRLEMASGQTAKVFLR*TRGSNQ
Trigger: CTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTT...TGCTGTCTGGCCTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCAAACCCCAGCGCTCTTaGAAGGTTTTTCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: SAFIQETSCLRARQAGTAKPQRS*KVFLRW
Trigger: CCATCTCAGAAAAACCTTCCAAGAGCGCTGGGGTTT...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTGGACGAGACCGGGGTTaGACTCAGAGGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VNSSVYSESINPSALGRFGRDRG*TQRLQE
Trigger: TTCCTGCAGCCTCTGAGTTCAACCCCGGTCTCGTCC...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR TCA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCGAGCTGAGATCAAAATaGAATAAGGAACCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGELRSK*NKEPGS
Trigger: ACTACCAGGTTCCTTATTTCATTTTGATCTCAGCTC...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR GCA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTCCTCTCAAGTCAAGCTaGCTGGAGACTGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VNSSVYSESINPSALGRFPLKSS*LETVAA
Trigger: AGCTGCTACAGTCTCCAGGCAGCTTGACTTGAGAGG...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CCA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTAGTGCCTCAGGATCTTaGTGGCCTTGTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: VNSSVYSESINPSALGRFSASGS*WPCWSQ
Trigger: CTGTGACCAACAAGGCCACCAAGATCCTGAGGCACT...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS CCA 90 bp CCCATCGCCCTTGCGCTCGGCGGGTCCGGCTTGGAAGGCCCGGCTTaGAAGGCCCCGGGACGGCGCGGCGGGCGGGCAGCTCAGGGGCGT +
Preference number: 5 (lower is better)
Translates to: PIALALGGSGLEGPA*KAPGRRGGRAAQGR
Trigger: ACGCCCCTGAGCTGCCCGCCCGCCGCGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS CCA 90 bp AGGGTCTGGCTGTGCCCATCGCCCTTGCGCTCGGCGGGTCCGGCTTaGAAGGCCCGGCTTGGAAGGCCCCGGGACGGCGCGGCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: RVWLCPSPLRSAGPA*KARLGRPRDGAAGG
Trigger: CCCGCCCGCCGCGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAGCCAGACCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS CCA 90 bp TCGGGCCCGGGGCGCATGGCGCTGGCCACCACCTCTGCGGCCTTCTaGATGGTGGAGAGGAAGGCTTCGCCTGCCGAGCCCGTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: SGPGRMALATTSAAF*MVERKASPAEPVRP
Trigger: CGGCCGCACGGGCTCGGCAGGCGAAGCCTTCCTCTCCACCATCCAGAAGGCCGCAGAGGTGGTGGCCAGCGCCATGCGCCCCGGGCCCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS TCA 90 bp GGTGTAGAAAGCTCAGGCGGTCCCGTAGCGGCGGCGCGGCAGCCATaGTCCAGGTCCCCTCCCGGTCTGCCCCGCTTCCGCCAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: GVESSGGPVAAARQP*SRSPPGLPRFRQAR
Trigger: CCGGGCCTGGCGGAAGCGGGGCAGACCGGGAGGGGACCTGGATCATGGCTGCCGCGCCGCCGCTACGGGACCGCCTGAGCTTTCTACACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300714.7
CDS CCA 90 bp TGGCAGGCTGGTAGGTGTCACCCCGCGGCAGGAGCCTCCGGGTACTaGGACTCTCGGGCCCGGGGCGCATGGCGCTGGCCACCACCTCTG +
Preference number: 5 (lower is better)
Translates to: WQAGRCHPAAGASGY*DSRARGAWRWPPPL
Trigger: CAGAGGTGGTGGCCAGCGCCATGCGCCCCGGGCCCGAGAGTCCCAGTACCCGGAGGCTCCTGCCGCGGGGTGACACCTACCAGCCTGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS GCA 90 bp CGAGGCCTGTTCGTTCCCCCAGGGTCTGGCTGTGCCCATCGCCCTTaGGCTCGGCGGGTCCGGCTTGGAAGGCCCGGCTTGGAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: RGLFVPPGSGCAHRP*ARRVRLGRPGLEGP
Trigger: GGGGCCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAGCCAGACCCTGGGGGAACGAACAGGCCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS GCA 90 bp GGGGGCAGGGCTGAGCCTGGCACCGCTGCTCCCTGTGGAGCACGGTaGCCTGGGCCCACTCCAGGGTGGCAAGTTCCTGCCACCAAGGCC +
Preference number: 5 (lower is better)
Translates to: GGRAEPGTAAPCGAR*PGPTPGWQVPATKA
Trigger: GGCCTTGGTGGCAGGAACTTGCCACCCTGGAGTGGGCCCAGGGCACCGTGCTCCACAGGGAGCAGCGGTGCCAGGCTCAGCCCTGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574944.1
CDS GCA 90 bp CAGCCGTGCGGCCGTGTTCCTTGCTGTAGCCGAAACCCTGGAGGGTaGTGTGCGGCCTGGCCTGGGAGCCCATGCCTGTGGCAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QPCGRVPCCSRNPGG*CAAWPGSPCLWQAG
Trigger: CCCCGCCTGCCACAGGCATGGGCTCCCAGGCCAGGCCGCACAGCACCCTCCAGGGTTTCGGCTACAGCAAGGAACACGGCCGCACGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000573295.5
CDS GCA 90 bp GATAGAGCAGGATCTTCAGCACCTGGGGAGTGGGGCGGTCAGCAGTaGTGGGCAGGCCGGACACGGGACACCCAGGGCAGGGCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: DRAGSSAPGEWGGQQ*WAGRTRDTQGRARG
Trigger: CCCCCGGGCCCTGCCCTGGGTGTCCCGTGTCCGGCCTGCCCAGCACTGCTGACCGCCCCACTCCCCAGGTGCTGAAGATCCTGCTCTATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574517.1
CDS GCA 90 bp AGCCCGTGCGGCCGTGTTCCTTGCTGTAGCCGAAACCCTGGAGGGTaGTGTGCGGCCTGGCCTGGGAGCCCATGCCTGTGGCAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SPCGRVPCCSRNPGG*CAAWPGSPCLWQAG
Trigger: CCCCGCCTGCCACAGGCATGGGCTCCCAGGCCAGGCCGCACAGCACCCTCCAGGGTTTCGGCTACAGCAAGGAACACGGCCGCACGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS GCA 90 bp ACTGGGACTCTCGGGCCCGGGGCGCATGGCGCTGGCCACCACCTCTaGGGCCTTCTGGATGGTGGAGAGGAAGGCTTCGCCTGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: TGTLGPGAHGAGHHL*GLLDGGEEGFACRA
Trigger: GGCTCGGCAGGCGAAGCCTTCCTCTCCACCATCCAGAAGGCCGCAGAGGTGGTGGCCAGCGCCATGCGCCCCGGGCCCGAGAGTCCCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS TCA 90 bp CACGTCCACCGGGTCCGCCGCTCCTTCCCTCCCGTCGGAGGCCACTaGATGCTGGCCGAGGCCTGTTCGTTCCCCCAGGGTCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: HVHRVRRSFPPVGGH*MLAEACSFPQGLAV
Trigger: CACAGCCAGACCCTGGGGGAACGAACAGGCCTCGGCCAGCATTCAGTGGCCTCCGACGGGAGGGAAGGAGCGGCGGACCCGGTGGACGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS GCA 90 bp TTGGGCTGTCCGTGCCCCCTGGGATCCGTTCAGGTCTCCACCGCCTaGTTTCTGCCAGTCTGGCCTCGGCCTCGCTGGGGTCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: LGCPCPLGSVQVSTA*FLPVWPRPRWGLRG
Trigger: CCCCCGGAGACCCCAGCGAGGCCGAGGCCAGACTGGCAGAAAGCAGGCGGTGGAGACCTGAACGGATCCCAGGGGGCACGGACAGCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 90 bp ACTGAATGCTGGCCGAGGCCTGTTCGTTCCCCCAGGGTCTGGCTGTaGCCATCGCCCTTGCGCTCGGCGGGTCCGGCTTGGAAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: TECWPRPVRSPRVWL*PSPLRSAGPAWKAR
Trigger: CCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAGCCAGACCCTGGGGGAACGAACAGGCCTCGGCCAGCATTCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS GCA 90 bp TCCACCGGGTCCGCCGCTCCTTCCCTCCCGTCGGAGGCCACTGAATaGTGGCCGAGGCCTGTTCGTTCCCCCAGGGTCTGGCTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: STGSAAPSLPSEATE*WPRPVRSPRVWLCP
Trigger: TGGGCACAGCCAGACCCTGGGGGAACGAACAGGCCTCGGCCAGCATTCAGTGGCCTCCGACGGGAGGGAAGGAGCGGCGGACCCGGTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS CCA 90 bp GGGCCACCACCTCGACCCTTTCTGCCAGGTCACCCGGCTCCCGGCTaGCCCCTGAATGGCTGTCGCTGCCGGAATGACTGCCCGAGTCCG +
Preference number: 5 (lower is better)
Translates to: GPPPRPFLPGHPAPG*PLNGCRCRNDCPSP
Trigger: CGGACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTGACCTGGCAGAAAGGGTCGAGGTGGTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 90 bp ACCGGGTCCGCCGCTCCTTCCCTCCCGTCGGAGGCCACTGAATGCTaGCCGAGGCCTGTTCGTTCCCCCAGGGTCTGGCTGTGCCCATCG +
Preference number: 5 (lower is better)
Translates to: TGSAAPSLPSEATEC*PRPVRSPRVWLCPS
Trigger: CGATGGGCACAGCCAGACCCTGGGGGAACGAACAGGCCTCGGCCAGCATTCAGTGGCCTCCGACGGGAGGGAAGGAGCGGCGGACCCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS CCA 90 bp GGAGCCTCCGGGTACTGGGACTCTCGGGCCCGGGGCGCATGGCGCTaGCCACCACCTCTGCGGCCTTCTGGATGGTGGAGAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: GASGYWDSRARGAWR*PPPLRPSGWWRGRL
Trigger: AAGCCTTCCTCTCCACCATCCAGAAGGCCGCAGAGGTGGTGGCCAGCGCCATGCGCCCCGGGCCCGAGAGTCCCAGTACCCGGAGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS GCA 90 bp CTGCCAGGTCACCCGGCTCCCGGCTGGCCCCTGAATGGCTGTCGCTaGCGGAATGACTGCCCGAGTCCGAGACCCTGCTCAGGTCGCTGT +
Preference number: 5 (lower is better)
Translates to: LPGHPAPGWPLNGCR*RNDCPSPRPCSGRC
Trigger: ACAGCGACCTGAGCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTGACCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 90 bp GGCGAGATGATGAGGGCTGCGCCAGGCCGCAGGGAGACCAGGCCATaGGGCCTCTCAGTTCACGCTCCCTGGAGGCGCCTACTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GEMMRAAPGRRETRP*GLSVHAPWRRLLEA
Trigger: AGCCTCCAGTAGGCGCCTCCAGGGAGCGTGAACTGAGAGGCCCCATGGCCTGGTCTCCCTGCGGCCTGGCGCAGCCCTCATCATCTCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS CCA 90 bp GAGGCCACTGAATGCTGGCCGAGGCCTGTTCGTTCCCCCAGGGTCTaGCTGTGCCCATCGCCCTTGCGCTCGGCGGGTCCGGCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: EATECWPRPVRSPRV*LCPSPLRSAGPAWK
Trigger: CTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAGCCAGACCCTGGGGGAACGAACAGGCCTCGGCCAGCATTCAGTGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS TCA 90 bp TCACCCGGCTCCCGGCTGGCCCCTGAATGGCTGTCGCTGCCGGAATaGCTGCCCGAGTCCGAGACCCTGCTCAGGTCGCTGTTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SPGSRLAPEWLSLPE*LPESETLLRSLFWE
Trigger: CTCCCAGAACAGCGACCTGAGCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS TCA 90 bp CACCTCGACCCTTTCTGCCAGGTCACCCGGCTCCCGGCTGGCCCCTaGATGGCTGTCGCTGCCGGAATGACTGCCCGAGTCCGAGACCCT +
Preference number: 5 (lower is better)
Translates to: HLDPFCQVTRLPAGP*MAVAAGMTARVRDP
Trigger: AGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTGACCTGGCAGAAAGGGTCGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS TCA 90 bp GTGTTCTCTGCAACCCAGGGGTGCCTCTCCAGGACCGGAGTCCTCTaGAACGCCACCGTCAGGGAGGACGGCGGGCTGCCAGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: VFSATQGCLSRTGVL*NATVREDGGLPAHL
Trigger: CAGGTGGGCTGGCAGCCCGCCGTCCTCCCTGACGGTGGCGTTTCAGAGGACTCCGGTCCTGGAGAGGCACCCCTGGGTTGCAGAGAACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS GCA 90 bp CGCGGCTCCACGCACAGCTGCTGGGGCCTCTCTTTGGGCTGTCCGTaGCCCCTGGGATCCGTTCAGGTCTCCACCGCCTGCTTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RGSTHSCWGLSLGCP*PLGSVQVSTACFLP
Trigger: TGGCAGAAAGCAGGCGGTGGAGACCTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 90 bp CCGAGACCCTGCTCAGGTCGCTGTTCTGGGAGGAATTCTGAGAGCTaGGGCCGCTGTCCAGCTCATCCCAGCCCCCTCCGGCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: PRPCSGRCSGRNSES*GRCPAHPSPLRPAQ
Trigger: CTGGGCAGGCCGGAGGGGGCTGGGATGAGCTGGACAGCGGCCCCAGCTCTCAGAATTCCTCCCAGAACAGCGACCTGAGCAGGGTCTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS CCA 90 bp CCGGAGCTGCTGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTaGCTGCTGCCCGGAGACTCGTGGGAGATTTCTGCGGCACGCTCG +
Preference number: 5 (lower is better)
Translates to: PELLCRRLRRYSSRH*LLPGDSWEISAARS
Trigger: CGAGCGTGCCGCAGAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAGCAGCTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS-3UTR CAA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTTGCTGGGGCCTCTCTTaGGGCTGTCCGTGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLCWGLS*GCPCPL
Trigger: CAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCA...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS GCA 90 bp CCGGCTCCCGGCTGGCCCCTGAATGGCTGTCGCTGCCGGAATGACTaGCCGAGTCCGAGACCCTGCTCAGGTCGCTGTTCTGGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: PAPGWPLNGCRCRND*PSPRPCSGRCSGRN
Trigger: ATTCCTCCCAGAACAGCGACCTGAGCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS CCA 90 bp CCACGCACAGCTGCTGGGGCCTCTCTTTGGGCTGTCCGTGCCCCCTaGGATCCGTTCAGGTCTCCACCGCCTGCTTTCTGCCAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: PRTAAGASLWAVRAP*DPFRSPPPAFCQSG
Trigger: GCCAGACTGGCAGAAAGCAGGCGGTGGAGACCTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS-3UTR CAA 90 bp AGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGGGAGCTCTTGGAAGGCCCGGCTaGGAAGGCCCCGGGACGGCG +
Preference number: 5 (lower is better)
Translates to: SPDTGHHHRTSPSGESGALGRPG*EGPGTA
Trigger: CGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAAG...AGCTCCCGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS-3UTR CAA 90 bp AAGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGCTGTGCCCATCGCCCTaGCGCTCGGCGGGTCCGGCT +
Preference number: 5 (lower is better)
Translates to: KLFPCRGSGGPAKAAASWLCPSP*RSAGPA
Trigger: AGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAG...CCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS GCA 90 bp CCAGCTCCATGCCAGCAAACAAGGAGTCGCGGCTCCACGCACAGCTaGTGGGGCCTCTCTTTGGGCTGTCCGTGCCCCCTGGGATCCGTT +
Preference number: 5 (lower is better)
Translates to: PAPCQQTRSRGSTHS*WGLSLGCPCPLGSV
Trigger: AACGGATCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCCGCGACTCCTTGTTTGCTGGCATGGAGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 90 bp TTTCTGCGGCACGCTCGGGTTAGGGAAGGGCGAGATGATGAGGGCTaGGCCAGGCCGCAGGGAGACCAGGCCATGGGGCCTCTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: FLRHARVREGRDDEG*ARPQGDQAMGPLSS
Trigger: TGAACTGAGAGGCCCCATGGCCTGGTCTCCCTGCGGCCTGGCGCAGCCCTCATCATCTCGCCCTTCCCTAACCCGAGCGTGCCGCAGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS GCA 90 bp CTCCAGCAGGCACTGGCTGCTGCCCGGAGACTCGTGGGAGATTTCTaGGGCACGCTCGGGTTAGGGAAGGGCGAGATGATGAGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LQQALAAARRLVGDF*GTLGLGKGEMMRAA
Trigger: CGCAGCCCTCATCATCTCGCCCTTCCCTAACCCGAGCGTGCCGCAGAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS GCA 90 bp TGCTGTGCAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTaGCCGGAGACTCGTGGGAGATTTCTGCGGCACGCTCGGGTTAGG +
Preference number: 5 (lower is better)
Translates to: CCAGGSGGTPAGTGC*PETRGRFLRHARVR
Trigger: CCTAACCCGAGCGTGCCGCAGAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS GCA 90 bp CTGTGGAGCACGGTGCCCTGGGCCCACTCCAGGGTGGCAAGTTCCTaGCACCAAGGCCCTTCTGTCACAGCCAATGGGATGCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LWSTVPWAHSRVASS*HQGPSVTANGMPSS
Trigger: GGAGGAGGGCATCCCATTGGCTGTGACAGAAGGGCCTTGGTGGCAGGAACTTGCCACCCTGGAGTGGGCCCAGGGCACCGTGCTCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574944.1
CDS CCA 90 bp AAACAAGGAGTCGCGGCTCCACGCACAGCTGCTGGGGCCTCTCTTTaGGCTGTCCGTGCCCCCTGGGATCCGTTCAGGTCTCCACCGCCT +
Preference number: 5 (lower is better)
Translates to: KQGVAAPRTAAGASL*AVRAPWDPFRSPPP
Trigger: AGGCGGTGGAGACCTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCCGCGACTCCTTGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 90 bp GCTCCATGCCAGCAAACAAGGAGTCGCGGCTCCACGCACAGCTGCTaGGGCCTCTCTTTGGGCTGTCCGTGCCCCCTGGGATCCGTTCAG +
Preference number: 5 (lower is better)
Translates to: APCQQTRSRGSTHSC*GLSLGCPCPLGSVQ
Trigger: CTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCCGCGACTCCTTGTTTGCTGGCATGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 90 bp TCTGAGCCAGGAGGCTCTTTGGCTGCTGTCCTCTGGGACGATGTTTaGGGGGCGCGGGGAGCATCAGGACAGGACTCTCCCGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SEPGGSLAAVLWDDV*GARGASGQDSPAAA
Trigger: GGCTGCTGCGGGAGAGTCCTGTCCTGATGCTCCCCGCGCCCCCCAAACATCGTCCCAGAGGACAGCAGCCAAAGAGCCTCCTGGCTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 90 bp ACCGCTGCTCCCTGTGGAGCACGGTGCCCTGGGCCCACTCCAGGGTaGCAAGTTCCTGCCACCAAGGCCCTTCTGTCACAGCCAATGGGA +
Preference number: 5 (lower is better)
Translates to: TAAPCGARCPGPTPG*QVPATKALLSQPMG
Trigger: TCCCATTGGCTGTGACAGAAGGGCCTTGGTGGCAGGAACTTGCCACCCTGGAGTGGGCCCAGGGCACCGTGCTCCACAGGGAGCAGCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574944.1
CDS-3UTR CAA 90 bp GCTGCTCCCCAGGGAGGCGATGGCACACAGCGCCCTCAGCTGCGTGCATTCACTGGGACGAGACCGGGGTaGAACTCAGAGGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: AAPQGGDGTQRPQLRAFTGTRPG*NSEAAG
Trigger: TCCTGCAGCCTCTGAGTTCAACCCCGGTCTCGTCCC...AGTGAATGCACGCAGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CAA 90 bp TTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATGAAGCTTGGAAGGCCCGGCTaGGAAGGCCCCGGGACGGCG +
Preference number: 5 (lower is better)
Translates to: FPCRGSGGPAKAAASWMKLGRPG*EGPGTA
Trigger: CGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAAG...CTTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS CCA 90 bp GCACACAGCGCCCTCAGCTGCGTGCATTCACTGGTCCCACGCAGGTaGCAGGTCAGCAGCTGCAGCACGGCCTCACAGTTGAGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: AHSALSCVHSLVPRR*QVSSCSTASQLSSP
Trigger: TGGACTGCTCAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAGTGAATGCACGCAGCTGAGGGCGCTGTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000571115.1
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS-3UTR CAA 90 bp GCCCACCCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGATCTTGGTGGCCTTGTaGGTCACAGGTCCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: AHPDGTGEQWLVAAHDLLILVAL*VTGPGL
Trigger: CAGCCCGGGACCTGTGACCAACAAGGCCACCAAGAT...CAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGGGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp GCTGCTCCCCAGGGAGGCGATGGCACACAGCGCCCTCAGCTGCGTGCATTCACTATCTTGGTGGCCTTGTaGGTCACAGGTCCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: AAPQGGDGTQRPQLRAFTILVAL*VTGPGL
Trigger: CAGCCCGGGACCTGTGACCAACAAGGCCACCAAGAT...AGTGAATGCACGCAGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CAA 90 bp AACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGGACGAGACCGGGGTaGAACTCAGAGGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: NPHAPNPASAPSPPRWDGGTRPG*NSEAAG
Trigger: TCCTGCAGCCTCTGAGTTCAACCCCGGTCTCGTCCC...CCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp CCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGGGAAGCGGGGGAGCAGTGGCTaGTTGCTGCTCATGACCTCC +
Preference number: 5 (lower is better)
Translates to: PDGTGEQWLVAAHDLLGKRGSSG*LLLMTS
Trigger: GGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCG...CTTCCCCAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp ACAGGGAGGCTGCAGCAGGGTCCTCTCTCAACAGTCAGGGATGAACAGCAATGGCTGTGCCCATCGCCCTaGCGCTCGGCGGGTCCGGCT +
Preference number: 5 (lower is better)
Translates to: TGRLQQGPLSTVRDEQQWLCPSP*RSAGPA
Trigger: AGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAG...CCATTGCTGTTCATCCCTGACTGTTGAGAGAGGACCCTGCTGCAGCCTCCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS GCA 90 bp CTGAATGGCTGTCGCTGCCGGAATGACTGCCCGAGTCCGAGACCCTaGTCAGGTCGCTGTTCTGGGAGGAATTCTGAGAGCTGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LNGCRCRNDCPSPRP*SGRCSGRNSESWGR
Trigger: GCGGCCCCAGCTCTCAGAATTCCTCCCAGAACAGCGACCTGAGCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS GCA 90 bp AGCTGCGTGCATTCACTGGTCCCACGCAGGTGGCAGGTCAGCAGCTaGAGCACGGCCTCACAGTTGAGCAGTCCACACCTGCACAGAGGG +
Preference number: 5 (lower is better)
Translates to: SCVHSLVPRRWQVSS*STASQLSSPHLHRG
Trigger: CCCTCTGTGCAGGTGTGGACTGCTCAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAGTGAATGCACGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CAA 90 bp CCCGATGGGACGGGGGAGCAGTGGCTTGTTGCTGCTCATGACCTCCTGGGGAAGAGGATCTTGGTGGCCTaGTTGGTCACAGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: PDGTGEQWLVAAHDLLGKRILVA*LVTGPG
Trigger: CCCGGGACCTGTGACCAACAAGGCCACCAAGATCCT...CTTCCCCAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCGTCCCATCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGGGACGAGACCGGGGTaGAACTCAGAGGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWGTRPG*NSEAAG
Trigger: TCCTGCAGCCTCTGAGTTCAACCCCGGTCTCGTCCC...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS TCA 90 bp GCGCGTGGTCCCCGAGTCACAGTCCTCACCAAGCTCAACTCCTGCTaGCAGTCACTCAGGGCCACCACCTCGACCCTTTCTGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: ARGPRVTVLTKLNSC*QSLRATTSTLSARS
Trigger: TGACCTGGCAGAAAGGGTCGAGGTGGTGGCCCTGAGTGACTGTCAGCAGGAGTTGAGCTTGGTGAGGACTGTGACTCGGGGACCACGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS TCA 90 bp CCACCTCCCCAGAGGCCGGAATGGCAGAGTGACAGCCGCTCAGCGTaGCTAGCTCCATCGCTCCCCGAGAACCGACTGATGTCGTGTGTT +
Preference number: 5 (lower is better)
Translates to: PPPQRPEWQSDSRSA*LAPSLPENRLMSCV
Trigger: AACACACGACATCAGTCGGTTCTCGGGGAGCGATGGAGCTAGTCACGCTGAGCGGCTGTCACTCTGCCATTCCGGCCTCTGGGGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS TCA 90 bp GGGACTATGAATCGTTCCACCTCCCCAGAGGCCGGAATGGCAGAGTaGCAGCCGCTCAGCGTGACTAGCTCCATCGCTCCCCGAGAACCG +
Preference number: 5 (lower is better)
Translates to: GTMNRSTSPEAGMAE*QPLSVTSSIAPREP
Trigger: CGGTTCTCGGGGAGCGATGGAGCTAGTCACGCTGAGCGGCTGTCACTCTGCCATTCCGGCCTCTGGGGAGGTGGAACGATTCATAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS GCA 90 bp AAGTCCTGCGCGGCCGCGCGAACCTTCTGGTACAAGCTGTTCCCGTaGAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATG +
Preference number: 5 (lower is better)
Translates to: KSCAAARTFWYKLFP*RGSGGPAKAAASWM
Trigger: CATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTACCAGAAGGTTCGCGCGGCCGCGCAGGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 90 bp GAGCCGTGCATCCCCCTAGGGACAGCAGAATCCCCAGGAACCCTTTaGACCACTCTGGGACCCTGCCATCCGCTCTTTCCACTACACGGG +
Preference number: 5 (lower is better)
Translates to: EPCIPLGTAESPGTL*TTLGPCHPLFPLHG
Trigger: CCCGTGTAGTGGAAAGAGCGGATGGCAGGGTCCCAGAGTGGTGCAAAGGGTTCCTGGGGATTCTGCTGTCCCTAGGGGGATGCACGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS-3UTR CAA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGAGGATCTTCAGCACCTaGAGCTTCCCGTGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWRIFST*SFPWPE
Trigger: CTCCGGCCACGGGAAGCTCAAGGTGCTGAAGATCCT...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp CGCTGCTCCCCAGGGAGGCGATGGCACACAGCGCCCTCAGCTGCGTGCATTCACAAGTGCCTCAGGATCTaGGTGGCCTTGTTGGTCACA +
Preference number: 5 (lower is better)
Translates to: RCSPGRRWHTAPSAACIHKCLRI*VALLVT
Trigger: TGTGACCAACAAGGCCACCAAGATCCTGAGGCACTT...GTGAATGCACGCAGCTGAGGGCGCTGTGTGCCATCGCCTCCCTGGGGAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS TCA 90 bp TCCCACGCAGGTGGCAGGTCAGCAGCTGCAGCACGGCCTCACAGTTaGGCAGTCCACACCTGCACAGAGGGGACACGCTTTGATGAAGTG +
Preference number: 5 (lower is better)
Translates to: SHAGGRSAAAARPHS*AVHTCTEGTRFDEV
Trigger: CACTTCATCAAAGCGTGTCCCCTCTGTGCAGGTGTGGACTGCTCAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCACCTGCGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS CCA 90 bp CGCTTTGATGAAGTGCTGTGCCTCCTCGCGGCTCAGGAAGGCGCGTaGTCCCCGAGTCACAGTCCTCACCAAGCTCAACTCCTGCTGACA +
Preference number: 5 (lower is better)
Translates to: RFDEVLCLLAAQEGA*SPSHSPHQAQLLLT
Trigger: TGTCAGCAGGAGTTGAGCTTGGTGAGGACTGTGACTCGGGGACCACGCGCCTTCCTGAGCCGCGAGGAGGCACAGCACTTCATCAAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000571115.1
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 90 bp CGCTCCCTGGAGGCGCCTACTGGAGGCTCTGCCATCAGGAGCACCTaGGCTTCTAGGGTCCCCTGTGTCATCAGTATTGCAGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: RSLEAPTGGSAIRST*ASRVPCVISIAAFR
Trigger: TCTGAAGGCTGCAATACTGATGACACAGGGGACCCTAGAAGCCCAGGTGCTCCTGATGGCAGAGCCTCCAGTAGGCGCCTCCAGGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS-3UTR CAA 90 bp CAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGTGGCTTAAGTGCCTCAGGATCTaGGTGGCCTTGTTGGTCACA +
Preference number: 5 (lower is better)
Translates to: QTQPQHLAHPDGTGEQWLKCLRI*VALLVT
Trigger: TGTGACCAACAAGGCCACCAAGATCCTGAGGCACTT...AAGCCACTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp AGCCCGGACACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGGGAGCTCGGGAGCTCTCACTGTaGACATGGCCGGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: SPDTGHHHRTSPSGESGARELSL*TWPERG
Trigger: TCCTCTCTCCGGCCATGTCAACAGTGAGAGCTCCCG...AGCTCCCGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGTGTCCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572050.1
CDS GCA 90 bp AGCTGCGTGCATTCACTGGTCCCACGCAGGTGGCAGGTCAGCAGCTaGAGCACGGCCTCACAGTTGAGCAGTCCACACGCTTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: SCVHSLVPRRWQVSS*STASQLSSPHALMK
Trigger: CTTCATCAAAGCGTGTGGACTGCTCAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAGTGAATGCACGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS-3UTR CAA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCAGGATCTTCAGCACCTaGAGCTTCCCGTGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLRIFST*SFPWPE
Trigger: CTCCGGCCACGGGAAGCTCAAGGTGCTGAAGATCCT...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp TACAAGCTGTTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCAGGATCTTCAGCACCTaGAGCTTCCCGTGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: YKLFPCRGSGGPAKAAASRIFST*SFPWPE
Trigger: CTCCGGCCACGGGAAGCTCAAGGTGCTGAAGATCCT...GGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CAA 90 bp ATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGGACGGGGGAGCAGAAGGCAGAGTTGCGTTaGAGGATGAGCAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: MHQTQPQHLAHPDGTGEQKAELR*RMSRKK
Trigger: CTTCTTCCTGCTCATCCTCAAACGCAACTCTGCCTT...CTGCTCCCCCGTCCCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp GCGCTCTTGGAAGGTTTTTCTGAGATGGACCAGAGGCTCCAATCAGAGGCTTCGTGCTGGGGCCTCTCTTaGGGCTGTCCGTGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: ALLEGFSEMDQRLQSEASCWGLS*GCPCPL
Trigger: CAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCA...CGAAGCCTCTGATTGGAGCCTCTGGTCCATCTCAGAAAAACCTTCCAAGAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp AGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAGGCCAGACAGCAGTAGGTTCCCCAGGGTaGGGGGACCGTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: REGSRRDLRLEMASGQTAVGSPG*GDRGWL
Trigger: CAGCCAGCCACGGTCCCCCAACCCTGGGGAACCTAC...TGCTGTCTGGCCTGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637944.2
CDS-3UTR CAA 90 bp GCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGCCTCAGCACGGCCTCACAGTaGAGCAGTCCACACGCTTTG +
Preference number: 5 (lower is better)
Translates to: ALPPAIPRRDSSPNSQSLSTASQ*SSPHAL
Trigger: CAAAGCGTGTGGACTGCTCAACTGTGAGGCCGTGCT...GAGGCTCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp ATGGGGGAAACTGAGGTAGCCCTAGGGTCGTCCTCTCAAGTCAAGCTGCCTGGAAGGATCTTGGTGGCCTaGTTGGTCACAGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: MGETEVALGSSSQVKLPGRILVA*LVTGPG
Trigger: CCCGGGACCTGTGACCAACAAGGCCACCAAGATCCT...TCCAGGCAGCTTGACTTGAGAGGACGACCCTAGGGCTACCTCAGTTTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp TGCCCACAGGAGGCCTCAAAGTGCCTCAGGATCTTGGTGGCCTTGTTGGTCACAAGGATCTTGGTGGCCTaGTTGGTCACAGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: CPQEASKCLRILVALLVTRILVA*LVTGPG
Trigger: CCCGGGACCTGTGACCAACAAGGCCACCAAGATCCT...TGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS-3UTR CAA 90 bp ACCCTCAACCCACATGCACCAAACCCAGCCTCAGCACCTAGCCCACCCCGATGGAAGTGCCTCAGGATCTaGGTGGCCTTGTTGGTCACA +
Preference number: 5 (lower is better)
Translates to: TLNPHAPNPASAPSPPRWKCLRI*VALLVT
Trigger: TGTGACCAACAAGGCCACCAAGATCCTGAGGCACTT...CCATCGGGGTGGGCTAGGTGCTGAGGCTGGGTTTGGTGCATGTGGGTTGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS TCA 90 bp CGCATCACTGACACTGTTTGCCCACCACGCCCTAAGGGGAGCTGCTaGGGTTTGCAGGTGACAGCTGACAACTGCAGAACGCAGCACAGA +
Preference number: 5 (lower is better)
Translates to: RITDTVCPPRPKGSC*GLQVTADNCRTQHR
Trigger: TCTGTGCTGCGTTCTGCAGTTGTCAGCTGTCACCTGCAAACCTCAGCAGCTCCCCTTAGGGCGTGGTGGGCAAACAGTGTCAGTGATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571601.1
ENST00000576090.5
CDS GCA 90 bp GGGACAGCAGAATCCCCAGGAACCCTTTGCACCACTCTGGGACCCTaGCATCCGCTCTTTCCACTACACGGGGACATCAAGGAAGGATAC +
Preference number: 5 (lower is better)
Translates to: GTAESPGTLCTTLGP*HPLFPLHGDIKEGY
Trigger: GTATCCTTCCTTGATGTCCCCGTGTAGTGGAAAGAGCGGATGGCAGGGTCCCAGAGTGGTGCAAAGGGTTCCTGGGGATTCTGCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS-3UTR CAA 90 bp CTGAAGCCCTGCCACCTGCCATCCCTCGTAGGGATTCAAGTCCAAATAGCCAGAGGGAGCAGTGGCTTGTaGCTGCTCATGACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LKPCHLPSLVGIQVQIARGSSGL*LLMTSW
Trigger: CCAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCC...TCTGGCTATTTGGACTTGAATCCCTACGAGGGATGGCAGGTGGCAGGGCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp TGCCCACAGGAGGCCTCAAAGTGCCTCAGGATCTTGGTGGCCTTGTTGGTCACACAGAGGGGACACGCTTaGATGAAGTGCTGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: CPQEASKCLRILVALLVTQRGHA*MKCCAS
Trigger: GGAGGCACAGCACTTCATCAAAGCGTGTCCCCTCTG...TGTGACCAACAAGGCCACCAAGATCCTGAGGCACTTTGAGGCCTCCTGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS TCA 90 bp CTGTTTGCCCACCACGCCCTAAGGGGAGCTGCTGAGGTTTGCAGGTaGCAGCTGACAACTGCAGAACGCAGCACAGAACGACTATGTCGA +
Preference number: 5 (lower is better)
Translates to: LFAHHALRGAAEVCR*QLTTAERSTERLCR
Trigger: TCGACATAGTCGTTCTGTGCTGCGTTCTGCAGTTGTCAGCTGTCACCTGCAAACCTCAGCAGCTCCCCTTAGGGCGTGGTGGGCAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571601.1
ENST00000576090.5
CDS TCA 90 bp CACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGGGAGCTaGAAGGGAACAAGAGCCCCTACCATGATGAGGTGCCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: HGTSSSDVPFRRIGS*KGTRAPTMMRCHFP
Trigger: TGGGAAATGGCACCTCATCATGGTAGGGGCTCTTGTTCCCTTTCAGCTCCCGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571094.1
ENST00000574517.1
ENST00000576090.5
CDS GCA 90 bp GGACATCATCATCGGACGTCCCCTTCAGGAGAATCGGGAGAATGGTaGGTCCTTCTCTGTCCCTTCGAGACGTCTGTGTTCTCTGCAACC +
Preference number: 5 (lower is better)
Translates to: GHHHRTSPSGESGEW*VLLCPFETSVFSAT
Trigger: GGTTGCAGAGAACACAGACGTCTCGAAGGGACAGAGAAGGACGCACCATTCTCCCGATTCTCCTGAAGGGGACGTCCGATGATGATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS CCA 90 bp ACGGGACATCATCATCGGACGTCCCCTTCAGGAGAATCGGGAGAATaGTGCGTCCTTCTCTGTCCCTTCGAGACGTCTGTGTTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: TGHHHRTSPSGESGE*CVLLCPFETSVFSA
Trigger: TGCAGAGAACACAGACGTCTCGAAGGGACAGAGAAGGACGCACCATTCTCCCGATTCTCCTGAAGGGGACGTCCGATGATGATGTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS CCA 90 bp GTGACAACATACGAAAACGTGGACCTGAAGTGTTTCCCGAGGCTGTaGACACGCATCACTGACACTGTTTGCCCACCACGCCCTAAGGGG +
Preference number: 5 (lower is better)
Translates to: VTTYENVDLKCFPRL*TRITDTVCPPRPKG
Trigger: CCCCTTAGGGCGTGGTGGGCAAACAGTGTCAGTGATGCGTGTCCACAGCCTCGGGAAACACTTCAGGTCCACGTTTTCGTATGTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS-3UTR CAA 90 bp TTCCCGTGCAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATGAAGAAGGCAGAGTTGCGTTaGAGGATGAGCAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FPCRGSGGPAKAAASWMKKAELR*RMSRKK
Trigger: CTTCTTCCTGCTCATCCTCAAACGCAACTCTGCCTT...CTTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS-3UTR CAA 90 bp TCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGGGACTGCCGGGAGCAGTGGCTTGTaGCTGCTCATGACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SAFIQETSCLRARQAGTAGSSGL*LLMTSW
Trigger: CCAGGAGGTCATGAGCAGCAACAAGCCACTGCTCCC...GGCAGTCCCTGCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCCGGGGGAGCAGTGGCTaGTTGCTGCTCATGACCTCC +
Preference number: 5 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGRGSSG*LLLMTS
Trigger: GGAGGTCATGAGCAGCAACAAGCCACTGCTCCCCCG...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS GCA 90 bp AGCTGCGCCACTTGGGTTAAGAAGGGACACAGCCCCCAGCCTCCCTaGACTTACCAGCATGTAAGGCTATTTGAAGGTACCTCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: SCATWVKKGHSPQPP*TYQHVRLFEGTSPV
Trigger: TACAGGAGAGGTACCTTCAAATAGCCTTACATGCTGGTAAGTGCAGGGAGGCTGGGGGCTGTGTCCCTTCTTAACCCAAGTGGCGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS-3UTR CAA 90 bp CAGGTGAGAGCCAGGGAAGGATCACGTAGGGATCTGAGACTTGAAATGGCCTCAAGCAGTCCACACGCTTaGATGAAGTGCTGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: QVRAREGSRRDLRLEMASSSPHA*MKCCAS
Trigger: GGAGGCACAGCACTTCATCAAAGCGTGTGGACTGCT...TGAGGCCATTTCAAGTCTCAGATCCCTACGTGATCCTTCCCTGGCTCTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp GGTAGTCGCTTCCGCATTCATACAAGAAACCTCATGTCTGAGAGCAAGACAGGCAGCAGTCCACACGCTTaGATGAAGTGCTGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GSRFRIHTRNLMSESKTGSSPHA*MKCCAS
Trigger: GGAGGCACAGCACTTCATCAAAGCGTGTGGACTGCT...GCCTGTCTTGCTCTCAGACATGAGGTTTCTTGTATGAATGCGGAAGCGACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS TCA 90 bp ACACAGCCCCCAGCCTCCCTGCACTTACCAGCATGTAAGGCTATTTaGAGGTACCTCTCCTGTACCTACCTACTGACTAGCAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: TQPPASLHLPACKAI*RYLSCTYLLTSKAK
Trigger: TTTGGCTTTGCTAGTCAGTAGGTAGGTACAGGAGAGGTACCTTCAAATAGCCTTACATGCTGGTAAGTGCAGGGAGGCTGGGGGCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS TCA 90 bp CAGCATGTAAGGCTATTTGAAGGTACCTCTCCTGTACCTACCTACTaGCTAGCAAAGCCAAACAAGGCCCAGGCAAGCCCCTTTTCCACA +
Preference number: 5 (lower is better)
Translates to: QHVRLFEGTSPVPTY*LAKPNKAQASPFST
Trigger: TGTGGAAAAGGGGCTTGCCTGGGCCTTGTTTGGCTTTGCTAGTCAGTAGGTAGGTACAGGAGAGGTACCTTCAAATAGCCTTACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS-3UTR CAA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTATCTTGGTGGCCTTGTaGGTCACAGGTCCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: VNSSVYSESINPSALGRFILVAL*VTGPGL
Trigger: CAGCCCGGGACCTGTGACCAACAAGGCCACCAAGAT...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS-3UTR CAA 90 bp GTAAACAGTAGTGTTTATTCAGAAAGCATAAACCCCAGCGCTCTTGGAAGGTTTAGCACGGCCTCACAGTaGAGCAGTCCACACGCTTTG +
Preference number: 5 (lower is better)
Translates to: VNSSVYSESINPSALGRFSTASQ*SSPHAL
Trigger: CAAAGCGTGTGGACTGCTCAACTGTGAGGCCGTGCT...AAACCTTCCAAGAGCGCTGGGGTTTATGCTTTCTGAATAAACACTACTGTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000637944.2
CDS CAA 90 bp GCCCATCGCCCTTGCGCTCGGCGGGTCCGGCTTGGAAGGCCCGGCTaGGAAGGCCCCGGGACGGCGCGGCGGGCGGGCAGCTCAGGGGCG +
Preference number: 6 (lower is better)
Translates to: AHRPCARRVRLGRPG*EGPGTARRAGSSGA
Trigger: CGCCCCTGAGCTGCCCGCCCGCCGCGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS CAA 90 bp CAGGGTCTGGCTGTGCCCATCGCCCTTGCGCTCGGCGGGTCCGGCTaGGAAGGCCCGGCTTGGAAGGCCCCGGGACGGCGCGGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: QGLAVPIALALGGSG*EGPAWKAPGRRGGR
Trigger: CCGCCCGCCGCGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAGCCAGACCCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS CCA 72 bp GGCGAGTCCGGGGAATGCGGCGCTCGAGAGGAGCCGTaGGACCGGGGCCCGGGCGGACCGCCCTCACTCACC +
Preference number: 6 (lower is better)
Translates to: GESGECGAREEP*DRGPGGPPSLT
Trigger: GGTGAGTGAGGGCGGTCCGCCCGGGCCCCGGTCCCACGGCTCCTCTCGAGCGCCGCATTCCCCGGACTCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570854.1
ENST00000575891.1
ENST00000575961.1
CDS CCA 72 bp CTGTGCCCATCGCCCTTGCGCTCGGCGGGTCCGGCTTaGAAGGCCCGGCTTGGAAGGCCCCGGGACGGCGCG +
Preference number: 6 (lower is better)
Translates to: LCPSPLRSAGPA*KARLGRPRDGA
Trigger: CGCGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS CAA 72 bp GCTGTGCCCATCGCCCTTGCGCTCGGCGGGTCCGGCTaGGAAGGCCCGGCTTGGAAGGCCCCGGGACGGCGC +
Preference number: 6 (lower is better)
Translates to: AVPIALALGGSG*EGPAWKAPGRR
Trigger: GCGCCGTCCCGGGGCCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS TCA 72 bp AGCTCAGGCGGTCCCGTAGCGGCGGCGCGGCAGCCATaGTCCAGGTCCCCTCCCGGTCTGCCCCGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: SSGGPVAAARQP*SRSPPGLPRFR
Trigger: GCGGAAGCGGGGCAGACCGGGAGGGGACCTGGATCATGGCTGCCGCGCCGCCGCTACGGGACCGCCTGAGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300714.7
CDS GCA 72 bp CGGCGCGGCAGCCATGATCCAGGTCCCCTCCCGGTCTaGCCCGCTTCCGCCAGGCCCGGGCCCTCCAATCAC +
Preference number: 6 (lower is better)
Translates to: RRGSHDPGPLPV*PASARPGPSNH
Trigger: GTGATTGGAGGGCCCGGGCCTGGCGGAAGCGGGGCAGACCGGGAGGGGACCTGGATCATGGCTGCCGCGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300714.7
CDS CCA 72 bp GGTAGGTGTCACCCCGCGGCAGGAGCCTCCGGGTACTaGGACTCTCGGGCCCGGGGCGCATGGCGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: GRCHPAAGASGY*DSRARGAWRWP
Trigger: TGGCCAGCGCCATGCGCCCCGGGCCCGAGAGTCCCAGTACCCGGAGGCTCCTGCCGCGGGGTGACACCTACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp CAGGAGCAGCTACCCGGCGCGGAGACGCAAGGTCAATaGCTCCGGCCCGGGGCGAGTCCGGGGAATGCGGCG +
Preference number: 6 (lower is better)
Translates to: QEQLPGAETQGQ*LRPGASPGNAA
Trigger: CGCCGCATTCCCCGGACTCGCCCCGGGCCGGAGCCATTGACCTTGCGTCTCCGCGCCGGGTAGCTGCTCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570854.1
ENST00000575891.1
ENST00000575961.1
CDS CAA 90 bp CCGAGGCCTGTTCGTTCCCCCAGGGTCTGGCTGTGCCCATCGCCCTaGCGCTCGGCGGGTCCGGCTTGGAAGGCCCGGCTTGGAAGGCCC +
Preference number: 6 (lower is better)
Translates to: PRPVRSPRVWLCPSP*RSAGPAWKARLGRP
Trigger: GGGCCTTCCAAGCCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAGCCAGACCCTGGGGGAACGAACAGGCCTCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS GCA 72 bp TGGCCGAGGCCTGTTCGTTCCCCCAGGGTCTGGCTGTaGCCATCGCCCTTGCGCTCGGCGGGTCCGGCTTGG +
Preference number: 6 (lower is better)
Translates to: WPRPVRSPRVWL*PSPLRSAGPAW
Trigger: CCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAGCCAGACCCTGGGGGAACGAACAGGCCTCGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS TCA 72 bp CGGGTCCGCCGCTCCTTCCCTCCCGTCGGAGGCCACTaGATGCTGGCCGAGGCCTGTTCGTTCCCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: RVRRSFPPVGGH*MLAEACSFPQG
Trigger: ACCCTGGGGGAACGAACAGGCCTCGGCCAGCATTCAGTGGCCTCCGACGGGAGGGAAGGAGCGGCGGACCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS GCA 72 bp GGATCTTCAGCACCTGGGGAGTGGGGCGGTCAGCAGTaGTGGGCAGGCCGGACACGGGACACCCAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: GSSAPGEWGGQQ*WAGRTRDTQGR
Trigger: CCTGCCCTGGGTGTCCCGTGTCCGGCCTGCCCAGCACTGCTGACCGCCCCACTCCCCAGGTGCTGAAGATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574517.1
CDS CCA 72 bp TGCTGTAGCCGAAACCCTGGAGGGTGCTGTGCGGCCTaGCCTGGGAGCCCATGCCTGTGGCAGGCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: CCSRNPGGCCAA*PGSPCLWQAGS
Trigger: GGACCCCGCCTGCCACAGGCATGGGCTCCCAGGCCAGGCCGCACAGCACCCTCCAGGGTTTCGGCTACAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS CAA 72 bp GTTCGTTCCCCCAGGGTCTGGCTGTGCCCATCGCCCTaGCGCTCGGCGGGTCCGGCTTGGAAGGCCCGGCTT +
Preference number: 6 (lower is better)
Translates to: VRSPRVWLCPSP*RSAGPAWKARL
Trigger: AAGCCGGGCCTTCCAAGCCGGACCCGCCGAGCGCAAGGGCGATGGGCACAGCCAGACCCTGGGGGAACGAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS GCA 72 bp CACCCGGCTCCCGGCTGGCCCCTGAATGGCTGTCGCTaGCGGAATGACTGCCCGAGTCCGAGACCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: HPAPGWPLNGCR*RNDCPSPRPCS
Trigger: TGAGCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp CCCTGGGATCCGTTCAGGTCTCCACCGCCTGCTTTCTaGCAGTCTGGCCTCGGCCTCGCTGGGGTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: PWDPFRSPPPAF*QSGLGLAGVSG
Trigger: CCCGGAGACCCCAGCGAGGCCGAGGCCAGACTGGCAGAAAGCAGGCGGTGGAGACCTGAACGGATCCCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp CCGTGCCCCCTGGGATCCGTTCAGGTCTCCACCGCCTaGTTTCTGCCAGTCTGGCCTCGGCCTCGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: PCPLGSVQVSTA*FLPVWPRPRWG
Trigger: ACCCCAGCGAGGCCGAGGCCAGACTGGCAGAAAGCAGGCGGTGGAGACCTGAACGGATCCCAGGGGGCACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp TCCGCCGCTCCTTCCCTCCCGTCGGAGGCCACTGAATaGTGGCCGAGGCCTGTTCGTTCCCCCAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SAAPSLPSEATE*WPRPVRSPRVW
Trigger: CCAGACCCTGGGGGAACGAACAGGCCTCGGCCAGCATTCAGTGGCCTCCGACGGGAGGGAAGGAGCGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS GCA 72 bp AGGCTTCGCCTGCCGAGCCCGTGCGGCCGTGTTCCTTaGTGTAGCCGAAACCCTGGAGGGTGCTGTGCGGCC +
Preference number: 6 (lower is better)
Translates to: RLRLPSPCGRVP*CSRNPGGCCAA
Trigger: GGCCGCACAGCACCCTCCAGGGTTTCGGCTACAGCAAGGAACACGGCCGCACGGGCTCGGCAGGCGAAGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp GCCGCTCCTTCCCTCCCGTCGGAGGCCACTGAATGCTaGCCGAGGCCTGTTCGTTCCCCCAGGGTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: AAPSLPSEATEC*PRPVRSPRVWL
Trigger: CAGCCAGACCCTGGGGGAACGAACAGGCCTCGGCCAGCATTCAGTGGCCTCCGACGGGAGGGAAGGAGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000570854.1
ENST00000571601.1
ENST00000572050.1
ENST00000575891.1
ENST00000575961.1
CDS TCA 72 bp TCCCGGCTGGCCCCTGAATGGCTGTCGCTGCCGGAATaGCTGCCCGAGTCCGAGACCCTGCTCAGGTCGCTG +
Preference number: 6 (lower is better)
Translates to: SRLAPEWLSLPE*LPESETLLRSL
Trigger: CAGCGACCTGAGCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS TCA 72 bp CCTTTCTGCCAGGTCACCCGGCTCCCGGCTGGCCCCTaGATGGCTGTCGCTGCCGGAATGACTGCCCGAGTC +
Preference number: 6 (lower is better)
Translates to: PFCQVTRLPAGP*MAVAAGMTARV
Trigger: GACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTGACCTGGCAGAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp AGGGAGCCAGCGGCAACACGGTGTCCGAGAACAGGGTaGTCCCCAAGTCCTGCGCGGCCGCGCGAACCTTCT +
Preference number: 6 (lower is better)
Translates to: REPAATRCPRTG*SPSPARPREPS
Trigger: AGAAGGTTCGCGCGGCCGCGCAGGACTTGGGGAGCACCCTGTTCTCGGACACCGTGTTGCCGCTGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp ACGCACAGCTGCTGGGGCCTCTCTTTGGGCTGTCCGTaGCCCCTGGGATCCGTTCAGGTCTCCACCGCCTGC +
Preference number: 6 (lower is better)
Translates to: THSCWGLSLGCP*PLGSVQVSTAC
Trigger: GCAGGCGGTGGAGACCTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp GGGCTCACCTTGAGCTTCCCGTGGCCGGAGCTGCTGTaGAGGCGGCTCAGGAGGTACTCCAGCAGGCACTGG +
Preference number: 6 (lower is better)
Translates to: GLTLSFPWPELL*RRLRRYSSRHW
Trigger: CCAGTGCCTGCTGGAGTACCTCCTGAGCCGCCTGCACAGCAGCTCCGGCCACGGGAAGCTCAAGGTGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574517.1
CDS CCA 72 bp CCTCGACCCTTTCTGCCAGGTCACCCGGCTCCCGGCTaGCCCCTGAATGGCTGTCGCTGCCGGAATGACTGC +
Preference number: 6 (lower is better)
Translates to: PRPFLPGHPAPG*PLNGCRCRNDC
Trigger: GCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTGACCTGGCAGAAAGGGTCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp GTCGCGGCTCCACGCACAGCTGCTGGGGCCTCTCTTTaGGCTGTCCGTGCCCCCTGGGATCCGTTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: VAAPRTAAGASL*AVRAPWDPFRS
Trigger: AGACCTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCCGCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS TCA 72 bp GCCCAAGGTCGCGCCCTGGGACCACCCAGCCCCCTCTaGGGTCCAGCCCAGGAAAGCTCAGGGCTGACAAAA +
Preference number: 6 (lower is better)
Translates to: AQGRALGPPSPL*GPAQESSGLTK
Trigger: TTTTGTCAGCCCTGAGCTTTCCTGGGCTGGACCTCAGAGGGGGCTGGGTGGTCCCAGGGCGCGACCTTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571601.1
CDS GCA 72 bp CAGGCTGATGCCTCACAGCCGTGCGGCCGTGTTCCTTaGTGTAGCCGAAACCCTGGAGGGTGCTGTGCGGCC +
Preference number: 6 (lower is better)
Translates to: QADASQPCGRVP*CSRNPGGCCAA
Trigger: GGCCGCACAGCACCCTCCAGGGTTTCGGCTACAGCAAGGAACACGGCCGCACGGCTGTGAGGCATCAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300714.7
ENST00000573295.5
CDS GCA 72 bp TGCCAGCAAACAAGGAGTCGCGGCTCCACGCACAGCTaGTGGGGCCTCTCTTTGGGCTGTCCGTGCCCCCTG +
Preference number: 6 (lower is better)
Translates to: CQQTRSRGSTHS*WGLSLGCPCPL
Trigger: CAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCCGCGACTCCTTGTTTGCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp GGCGGCTCAGGAGGTACTCCAGCAGGCACTGGCTGCTaGCCGGAGACTCGTGGGAGATTTCTGCGGCACGCT +
Preference number: 6 (lower is better)
Translates to: GGSGGTPAGTGC*PETRGRFLRHA
Trigger: AGCGTGCCGCAGAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTGCCTGCTGGAGTACCTCCTGAGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS CCA 72 bp GTGCTCCCCAAGTCCTGCGCGGCCGCGCGAACCTTCTaGTACAAGCTGTTCCCGTGCAGAGGATCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: VLPKSCAAARTF*YKLFPCRGSGG
Trigger: GCCCCCAGATCCTCTGCACGGGAACAGCTTGTACCAGAAGGTTCGCGCGGCCGCGCAGGACTTGGGGAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp GCTGCTGGGGCCTCTCTTTGGGCTGTCCGTGCCCCCTaGGATCCGTTCAGGTCTCCACCGCCTGCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: AAGASLWAVRAP*DPFRSPPPAFC
Trigger: GCAGAAAGCAGGCGGTGGAGACCTGAACGGATCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp CAGCAAACAAGGAGTCGCGGCTCCACGCACAGCTGCTaGGGCCTCTCTTTGGGCTGTCCGTGCCCCCTGGGA +
Preference number: 6 (lower is better)
Translates to: QQTRSRGSTHSC*GLSLGCPCPLG
Trigger: TCCCAGGGGGCACGGACAGCCCAAAGAGAGGCCCCAGCAGCTGTGCGTGGAGCCGCGACTCCTTGTTTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp CCCTGTGGAGCACGGTGCCCTGGGCCCACTCCAGGGTaGCAAGTTCCTGCCACCAAGGCCCTTCTGTCACAG +
Preference number: 6 (lower is better)
Translates to: PCGARCPGPTPG*QVPATKALLSQ
Trigger: CTGTGACAGAAGGGCCTTGGTGGCAGGAACTTGCCACCCTGGAGTGGGCCCAGGGCACCGTGCTCCACAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574944.1
CDS GCA 72 bp GGCTGGCCCCTGAATGGCTGTCGCTGCCGGAATGACTaGCCGAGTCCGAGACCCTGCTCAGGTCGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: GWPLNGCRCRND*PSPRPCSGRCS
Trigger: AGAACAGCGACCTGAGCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACAGCCATTCAGGGGCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp ACCTGCACAGAGGGGACACGCTTTGATGAAGTGCTGTaGCTCCTCGCGGCTCAGGAAGGCGCGTGGTCCCCG +
Preference number: 6 (lower is better)
Translates to: TCTEGTRFDEVL*LLAAQEGAWSP
Trigger: CGGGGACCACGCGCCTTCCTGAGCCGCGAGGAGGCACAGCACTTCATCAAAGCGTGTCCCCTCTGTGCAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS CCA 72 bp GCCCTCAGCTGCGTGCATTCACTGGTCCCACGCAGGTaGCAGGTCAGCAGCTGCAGCACGGCCTCACAGTTG +
Preference number: 6 (lower is better)
Translates to: ALSCVHSLVPRR*QVSSCSTASQL
Trigger: CAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAGTGAATGCACGCAGCTGAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000571115.1
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp GGAGGCTCTTTGGCTGCTGTCCTCTGGGACGATGTTTaGGGGGCGCGGGGAGCATCAGGACAGGACTCTCCC +
Preference number: 6 (lower is better)
Translates to: GGSLAAVLWDDV*GARGASGQDSP
Trigger: GGGAGAGTCCTGTCCTGATGCTCCCCGCGCCCCCCAAACATCGTCCCAGAGGACAGCAGCCAAAGAGCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp GAGACCAGGCCATGGGGCCTCTCAGTTCACGCTCCCTaGAGGCGCCTACTGGAGGCTCTGCCATCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: ETRPWGLSVHAP*RRLLEALPSGA
Trigger: TGCTCCTGATGGCAGAGCCTCCAGTAGGCGCCTCCAGGGAGCGTGAACTGAGAGGCCCCATGGCCTGGTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS GCA 72 bp GCGGCCGCGCGAACCTTCTGGTACAAGCTGTTCCCGTaGAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: AAARTFWYKLFP*RGSGGPAKAAA
Trigger: AGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTACCAGAAGGTTCGCGCGGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp GCACTGGCTGCTGCCCGGAGACTCGTGGGAGATTTCTaGGGCACGCTCGGGTTAGGGAAGGGCGAGATGATG +
Preference number: 6 (lower is better)
Translates to: ALAAARRLVGDF*GTLGLGKGEMM
Trigger: CATCATCTCGCCCTTCCCTAACCCGAGCGTGCCGCAGAAATCTCCCACGAGTCTCCGGGCAGCAGCCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS GCA 72 bp ACGGTGCCCTGGGCCCACTCCAGGGTGGCAAGTTCCTaGCACCAAGGCCCTTCTGTCACAGCCAATGGGATG +
Preference number: 6 (lower is better)
Translates to: TVPWAHSRVASS*HQGPSVTANGM
Trigger: CATCCCATTGGCTGTGACAGAAGGGCCTTGGTGGCAGGAACTTGCCACCCTGGAGTGGGCCCAGGGCACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574944.1
CDS CCA 72 bp GAAGTGCTGTGCCTCCTCGCGGCTCAGGAAGGCGCGTaGTCCCCGAGTCACAGTCCTCACCAAGCTCAACTC +
Preference number: 6 (lower is better)
Translates to: EVLCLLAAQEGA*SPSHSPHQAQL
Trigger: GAGTTGAGCTTGGTGAGGACTGTGACTCGGGGACCACGCGCCTTCCTGAGCCGCGAGGAGGCACAGCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000571115.1
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS TCA 72 bp GGTGGCAGGTCAGCAGCTGCAGCACGGCCTCACAGTTaGGCAGTCCACACCTGCACAGAGGGGACACGCTTT +
Preference number: 6 (lower is better)
Translates to: GGRSAAAARPHS*AVHTCTEGTRF
Trigger: AAAGCGTGTCCCCTCTGTGCAGGTGTGGACTGCTCAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS TCA 72 bp CAGAGGCCGGAATGGCAGAGTGACAGCCGCTCAGCGTaGCTAGCTCCATCGCTCCCCGAGAACCGACTGATG +
Preference number: 6 (lower is better)
Translates to: QRPEWQSDSRSA*LAPSLPENRLM
Trigger: CATCAGTCGGTTCTCGGGGAGCGATGGAGCTAGTCACGCTGAGCGGCTGTCACTCTGCCATTCCGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS GCA 72 bp ACAGTTGAGCAGTCCACACGCTTTGATGAAGTGCTGTaGCTCCTCGCGGCTCAGGAAGGCGCGTGGTCCCCG +
Preference number: 6 (lower is better)
Translates to: TVEQSTRFDEVL*LLAAQEGAWSP
Trigger: CGGGGACCACGCGCCTTCCTGAGCCGCGAGGAGGCACAGCACTTCATCAAAGCGTGTGGACTGCTCAACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp CATTCACTGGTCCCACGCAGGTGGCAGGTCAGCAGCTaGAGCACGGCCTCACAGTTGAGCAGTCCACACGCT +
Preference number: 6 (lower is better)
Translates to: HSLVPRRWQVSS*STASQLSSPHA
Trigger: AGCGTGTGGACTGCTCAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAGTGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp TCCACACCTGCACAGAGGGGACACGCTTTGATGAAGTaGTGTGCCTCCTCGCGGCTCAGGAAGGCGCGTGGT +
Preference number: 6 (lower is better)
Translates to: STPAQRGHALMK*CASSRLRKARG
Trigger: ACCACGCGCCTTCCTGAGCCGCGAGGAGGCACAGCACTTCATCAAAGCGTGTCCCCTCTGTGCAGGTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS GCA 72 bp CATTCACTGGTCCCACGCAGGTGGCAGGTCAGCAGCTaGAGCACGGCCTCACAGTTGAGCAGTCCACACCTG +
Preference number: 6 (lower is better)
Translates to: HSLVPRRWQVSS*STASQLSSPHL
Trigger: CAGGTGTGGACTGCTCAACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCACCTGCGTGGGACCAGTGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571115.1
CDS GCA 72 bp CTGGCTCTTCCTGAGCGCGTGCGCGGCCCCTGTACCTaGAGCTTCCTGGATGAAGGCAGAGTTGCGTTTGAG +
Preference number: 6 (lower is better)
Translates to: LALPERVRGPCT*SFLDEGRVAFE
Trigger: CTCAAACGCAACTCTGCCTTCATCCAGGAAGCTGCAGGTACAGGGGCCGCGCACGCGCTCAGGAAGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574517.1
CDS GCA 72 bp GCGGCCGCGCGAACCTTCTGGTACAAGCTGTTCCCGTaGAGAGGATCTGGGGGCCCTGCAAAAGCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: AAARTFWYKLFP*RGSGGPAKAAE
Trigger: TTCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTACCAGAAGGTTCGCGCGGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574944.1
CDS GCA 72 bp TGTCGCTGCCGGAATGACTGCCCGAGTCCGAGACCCTaGTCAGGTCGCTGTTCTGGGAGGAATTCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: CRCRNDCPSPRP*SGRCSGRNSES
Trigger: GCTCTCAGAATTCCTCCCAGAACAGCGACCTGAGCAGGGTCTCGGACTCGGGCAGTCATTCCGGCAGCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000574944.1
ENST00000576090.5
ENST00000637944.2
CDS GCA 72 bp GCCTCACAGTTGAGCAGTCCACACGCTTTGATGAAGTaGTGTGCCTCCTCGCGGCTCAGGAAGGCGCGTGGT +
Preference number: 6 (lower is better)
Translates to: ASQLSSPHALMK*CASSRLRKARG
Trigger: ACCACGCGCCTTCCTGAGCCGCGAGGAGGCACAGCACTTCATCAAAGCGTGTGGACTGCTCAACTGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300714.7
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp GGACAGCAGAATCCCCAGGAACCCTTTGCACCACTCTaGGACCCTGCCATCCGCTCTTTCCACTACACGGGG +
Preference number: 6 (lower is better)
Translates to: GQQNPQEPFAPL*DPAIRSFHYTG
Trigger: CCCCGTGTAGTGGAAAGAGCGGATGGCAGGGTCCCAGAGTGGTGCAAAGGGTTCCTGGGGATTCTGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS CCA 72 bp ATCAATGGTGGTTCTCCACGGAGGAGCTGCGCCACTTaGGTTAAGAAGGGACACAGCCCCCAGCCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: INGGSPRRSCAT*VKKGHSPQPPC
Trigger: GCAGGGAGGCTGGGGGCTGTGTCCCTTCTTAACCCAAGTGGCGCAGCTCCTCCGTGGAGAACCACCATTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS GCA 72 bp ATCCCCCTAGGGACAGCAGAATCCCCAGGAACCCTTTaGACCACTCTGGGACCCTGCCATCCGCTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: IPLGTAESPGTL*TTLGPCHPLFP
Trigger: TGGAAAGAGCGGATGGCAGGGTCCCAGAGTGGTGCAAAGGGTTCCTGGGGATTCTGCTGTCCCTAGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS TCA 72 bp AGAGTATTTAACAGGACAAGCATGGGACCCACCGCGTaGGGTGCCGAAGCCTTTCGGTCGGAAGGGCCGAGA +
Preference number: 6 (lower is better)
Translates to: RVFNRTSMGPTA*GAEAFRSEGPR
Trigger: TCTCGGCCCTTCCGACCGAAAGGCTTCGGCACCTCACGCGGTGGGTCCCATGCTTGTCCTGTTAAATACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS GCA 72 bp GAATCCCCAGGAACCCTTTGCACCACTCTGGGACCCTaGCATCCGCTCTTTCCACTACACGGGGACATCAAG +
Preference number: 6 (lower is better)
Translates to: ESPGTLCTTLGP*HPLFPLHGDIK
Trigger: CTTGATGTCCCCGTGTAGTGGAAAGAGCGGATGGCAGGGTCCCAGAGTGGTGCAAAGGGTTCCTGGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573295.5
ENST00000576090.5
CDS GCA 72 bp CATCGGACGTCCCCTTCAGGAGAATCGGGAGAATGGTaGGTCCTTCTCTGTCCCTTCGAGACGTCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: HRTSPSGESGEW*VLLCPFETSVF
Trigger: GAACACAGACGTCTCGAAGGGACAGAGAAGGACGCACCATTCTCCCGATTCTCCTGAAGGGGACGTCCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570854.1
CDS CCA 72 bp TCAGGGATGAACAGCCTCGGAGAAGAGGCAAATCAATaGTGGTTCTCCACGGAGGAGCTGCGCCACTTGGGT +
Preference number: 6 (lower is better)
Translates to: SGMNSLGEEANQ*WFSTEELRHLG
Trigger: ACCCAAGTGGCGCAGCTCCTCCGTGGAGAACCACCATTGATTTGCCTCTTCTCCGAGGCTGTTCATCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS TCA 72 bp TCATCATCGGACGTCCCCTTCAGGAGAATCGGGAGCTaGAAGGGAACAAGAGCCCCTACCATGATGAGGTGC +
Preference number: 6 (lower is better)
Translates to: SSSDVPFRRIGS*KGTRAPTMMRC
Trigger: GCACCTCATCATGGTAGGGGCTCTTGTTCCCTTTCAGCTCCCGATTCTCCTGAAGGGGACGTCCGATGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571094.1
ENST00000574517.1
ENST00000576090.5
CDS TCA 72 bp GAGGCTGCAGCAGGGTCCTCTCTCAACAGTCAGGGATaGACAGCCTCGGAGAAGAGGCAAATCAATGGTGGT +
Preference number: 6 (lower is better)
Translates to: EAAAGSSLNSQG*TASEKRQINGG
Trigger: ACCACCATTGATTTGCCTCTTCTCCGAGGCTGTTCATCCCTGACTGTTGAGAGAGGACCCTGCTGCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS CCA 72 bp AACCTTCTGGTACAAGCTGTTCCCGTGCAGAGGATCTaGGGGCCCTGCAAAAGCTGCAGCTTCCTGGATGAA +
Preference number: 6 (lower is better)
Translates to: NLLVQAVPVQRI*GPCKSCSFLDE
Trigger: TTCATCCAGGAAGCTGCAGCTTTTGCAGGGCCCCCAGATCCTCTGCACGGGAACAGCTTGTACCAGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300714.7
ENST00000571094.1
ENST00000573295.5
ENST00000576090.5
ENST00000637944.2
CDS CCA 72 bp TACGAAAACGTGGACCTGAAGTGTTTCCCGAGGCTGTaGACACGCATCACTGACACTGTTTGCCCACCACGC +
Preference number: 6 (lower is better)
Translates to: YENVDLKCFPRL*TRITDTVCPPR
Trigger: GCGTGGTGGGCAAACAGTGTCAGTGATGCGTGTCCACAGCCTCGGGAAACACTTCAGGTCCACGTTTTCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS CAA 72 bp ACAGAACGACTATGTCGAAACCTTGCACTGAGAGCCTaGACCAACCCTAGCGTGGCTTCTGGCAGCCCAAGG +
Preference number: 6 (lower is better)
Translates to: TERLCRNLALRA*TNPSVASGSPR
Trigger: CCTTGGGCTGCCAGAAGCCACGCTAGGGTTGGTCAAGGCTCTCAGTGCAAGGTTTCGACATAGTCGTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571601.1
ENST00000576090.5
CDS TCA 72 bp AGGCTATTTGAAGGTACCTCTCCTGTACCTACCTACTaGCTAGCAAAGCCAAACAAGGCCCAGGCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: RLFEGTSPVPTY*LAKPNKAQASP
Trigger: GGGGCTTGCCTGGGCCTTGTTTGGCTTTGCTAGTCAGTAGGTAGGTACAGGAGAGGTACCTTCAAATAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS GCA 72 bp ACTTGGGTTAAGAAGGGACACAGCCCCCAGCCTCCCTaGACTTACCAGCATGTAAGGCTATTTGAAGGTACC +
Preference number: 6 (lower is better)
Translates to: TWVKKGHSPQPP*TYQHVRLFEGT
Trigger: GGTACCTTCAAATAGCCTTACATGCTGGTAAGTGCAGGGAGGCTGGGGGCTGTGTCCCTTCTTAACCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS TCA 72 bp CCAGCCTCCCTGCACTTACCAGCATGTAAGGCTATTTaGAGGTACCTCTCCTGTACCTACCTACTGACTAGC +
Preference number: 6 (lower is better)
Translates to: PASLHLPACKAI*RYLSCTYLLTS
Trigger: GCTAGTCAGTAGGTAGGTACAGGAGAGGTACCTTCAAATAGCCTTACATGCTGGTAAGTGCAGGGAGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576090.5
CDS CCA 72 bp CTACTTCTCAGAGGGTTTACTAAGAGGGGCTTACAATaGTGCGTCCTTCTCTGTCCCTTCGAGACGTCTGTG +
Preference number: 6 (lower is better)
Translates to: LLLRGFTKRGLQ*CVLLCPFETSV
Trigger: CACAGACGTCTCGAAGGGACAGAGAAGGACGCACCATTGTAAGCCCCTCTTAGTAAACCCTCTGAGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571601.1
CDS CAA 72 bp ACGGTTTATAGGGATGAAAACTGGAACCACCCATTCTaGCATTATTCAGTATCAGGACAGAATAGAGTTCAA +
Preference number: 6 (lower is better)
Translates to: TVYRDENWNHPF*HYSVSGQNRVQ
Trigger: TTGAACTCTATTCTGTCCTGATACTGAATAATGCAAGAATGGGTGGTTCCAGTTTTCATCCCTATAAACCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576090.5