RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000129566

Ensembl transcript IDs: ENST00000262715.10, ENST00000471684.2, ENST00000553365.5, ENST00000555008.5, ENST00000555727.5, ENST00000556488.5, ENST00000556549.1, ENST00000556935.5, ENST00000557314.5, ENST00000557627.1

Found 1541 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGTGCCATCTCCGGGAGAGCAGCGAGGCTTGGTGGCAAAGAGGTaGGTCCAGGGGCTGGTTGGCTGCCTGCTGGGGCAGGAGCCGGGG +
Preference number: 1 (lower is better)
Translates to: EVPSPGEQRGLVAKR*VQGLVGCLLGQEPG
Trigger: CCCCGGCTCCTGCCCCAGCAGGCAGCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAAGCCTCGCTGCTCTCCCGGAGATGGCACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 90 bp GCTTGGTGGCAAAGAGGTGAGTCCAGGGGCTGGTTGGCTGCCTGCTaGGGCAGGAGCCGGGGGTACTGGCTGAGGATTGAAGCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: AWWQRGESRGWLAAC*GRSRGYWLRIEACC
Trigger: GCAGCAGGCTTCAATCCTCAGCCAGTACCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 90 bp AGTGTGTGTTGGAGGTGCCATCTCCGGGAGAGCAGCGAGGCTTGGTaGCAAAGAGGTGAGTCCAGGGGCTGGTTGGCTGCCTGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: SVCWRCHLRESSEAW*QRGESRGWLAACWG
Trigger: GCCCCAGCAGGCAGCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAAGCCTCGCTGCTCTCCCGGAGATGGCACCTCCAACACACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR TCA 90 bp AGCTGCACGGGGCTCCATGGCAGCTGCACAGTGGCTAATGGGTCCTaGGTGAGCAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCA +
Preference number: 1 (lower is better)
Translates to: SCTGLHGSCTVANGS*VSRDAGQLHALMVP
Trigger: TGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTGCTCACTCAGGACCCATTAGCCACTGTGCAGCTGCCATGGAGCCCCGTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR TCA 90 bp CTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTaGCCCTTCGCATCGGAACAGGCCCAGCAGCTGCATACTGGGTCT +
Preference number: 1 (lower is better)
Translates to: LQGGVSAQPRFQAAH*PFASEQAQQLHTGS
Trigger: AGACCCAGTATGCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
3UTR CCA 90 bp GCTCCGGGTGCCCCCAGGTCCTTGGTGACTTTGAGCCCATCCACCTaGAAGAAGCTGATGCTGCCAGCCCAGCTGCCTGTGGCTATTACC +
Preference number: 1 (lower is better)
Translates to: APGAPRSLVTLSPST*KKLMLPAQLPVAIT
Trigger: GGTAATAGCCACAGGCAGCTGGGCTGGCAGCATCAGCTTCTTCCAGGTGGATGGGCTCAAAGTCACCAAGGACCTGGGGGCACCCGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 90 bp CCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACCTTaGGGCTTAGCCAGGCCAGGGCGGACACTGCCACATCCAGTGCCT +
Preference number: 1 (lower is better)
Translates to: PSPARTHLLHHSPIP*GLARPGRTLPHPVP
Trigger: AGGCACTGGATGTGGCAGTGTCCGCCCTGGCCTGGCTAAGCCCCAAGGTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 90 bp CTATTACCTGCCCCTCTGGGTGGAAGGCAACACAGTTCAGGGACTTaGGGTAGGTGTGCTGGAAGGCCAGCTGCCCACGGACTGTGTCCC +
Preference number: 1 (lower is better)
Translates to: LLPAPLGGRQHSSGT*GRCAGRPAAHGLCP
Trigger: GGGACACAGTCCGTGGGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCCACCCAGAGGGGCAGGTAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR GCA 90 bp GTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTaGCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAGAAGCC +
Preference number: 1 (lower is better)
Translates to: VPQGKSSALCGRVSS*LGHSCTVKSSEAEA
Trigger: GGCTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR CCA 90 bp ATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATC +
Preference number: 1 (lower is better)
Translates to: MSPQLSATGKVFCLV*PRQQLPWPQLHCEI
Trigger: GATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR GCA 90 bp CAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTaGAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACT +
Preference number: 1 (lower is better)
Translates to: QFRKYTLPCTSPTAS*RVELAPSQGSRQLT
Trigger: AGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
3UTR CCA 90 bp AAGAGCCGAGAGACCAGACCCAATTCCAAGTGTGCAGCCACCACATaGAGGTTGGTAAGGAACTTCGAAAGAAGTCCACGGTTCCCGCTC +
Preference number: 1 (lower is better)
Translates to: KSRETRPNSKCAATT*RLVRNFERSPRFPL
Trigger: GAGCGGGAACCGTGGACTTCTTTCGAAGTTCCTTACCAACCTCCATGTGGTGGCTGCACACTTGGAATTGGGTCTGGTCTCTCGGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR TCA 90 bp AGCTGCTCTTTGCCCATTGGTGGAGAAGGCCACAGCAGTAGGGGATaGGGAAACTGCCAGAGACAGGCTGGAGCTTTGCTGATTTTTCAT +
Preference number: 1 (lower is better)
Translates to: SCSLPIGGEGHSSRG*GNCQRQAGALLIFH
Trigger: ATGAAAAATCAGCAAAGCTCCAGCCTGTCTCTGGCAGTTTCCTCATCCCCTACTGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR TCA 90 bp TTCCAGATACTGCCATGGAACCATCTGGTGCCCAAGCCACAGCAGTaGCGGCTGCAGAACTCCTTGGTATACATGTGTCATCTGCTTCCT +
Preference number: 1 (lower is better)
Translates to: FQILPWNHLVPKPQQ*RLQNSLVYMCHLLP
Trigger: AGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACCAGATGGTTCCATGGCAGTATCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR GCA 90 bp TACTGCCATGGAACCATCTGGTGCCCAAGCCACAGCAGTGACGGCTaGAGAACTCCTTGGTATACATGTGTCATCTGCTTCCTTAGGAAC +
Preference number: 1 (lower is better)
Translates to: YCHGTIWCPSHSSDG*RTPWYTCVICFLRN
Trigger: GTTCCTAAGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACCAGATGGTTCCATGGCAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 90 bp TCTGCCACATGTTACCTGTGGTCCATTCTCCTTCTGGGCTGCATTTaGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAAAATG +
Preference number: 1 (lower is better)
Translates to: SATCYLWSILLLGCI*PGSIGSHQSWHTKM
Trigger: CATTTTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACCACAGGTAACATGTGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR TCA 90 bp CCCCTGGCTTCATGCAAAGTAACTTCAAATCTGCTTTGGCCAAGATaGGAAAGTGACCATCAGGAGCCCAATCCAGACTTGTCAGCACCC +
Preference number: 1 (lower is better)
Translates to: PLASCKVTSNLLWPR*ESDHQEPNPDLSAP
Trigger: GGGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACTTTCTCATCTTGGCCAAAGCAGATTTGAAGTTACTTTGCATGAAGCCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR CCA 90 bp CTTCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTaGCACACAAAAATGAGGACTCAGATTCAGGTTTGGCTTGAGTTA +
Preference number: 1 (lower is better)
Translates to: LLGCIWPGSIGSHQS*HTKMRTQIQVWLEL
Trigger: TAACTCAAGCCAAACCTGAATCTGAGTCCTCATTTTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR TCA 90 bp TTCATGCAAAGTAACTTCAAATCTGCTTTGGCCAAGATGAGAAAGTaGCCATCAGGAGCCCAATCCAGACTTGTCAGCACCCCTAAGTCC +
Preference number: 1 (lower is better)
Translates to: FMQSNFKSALAKMRK*PSGAQSRLVSTPKS
Trigger: GGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACTTTCTCATCTTGGCCAAAGCAGATTTGAAGTTACTTTGCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR CCA 90 bp CAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATaGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTT +
Preference number: 1 (lower is better)
Translates to: QKHGLSADVIILWSG*KPGHWIEIKSLRLF
Trigger: AAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR CCA 90 bp AAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTaGCATGAGGCACATAAGAGAAGACAGAAGCATGGCCTATCAGCG +
Preference number: 1 (lower is better)
Translates to: KVDVEMMVQKVYFEA*HEAHKRRQKHGLSA
Trigger: CGCTGATAGGCCATGCTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR GCA 90 bp GATTCCTTTTGCCTCAAGAAAGAAAGAACTCCAGGATCCTTGGGCTaGAGGACAAATATGCCATACTCCTTGTGGGTGGACAATATCATA +
Preference number: 1 (lower is better)
Translates to: DSFCLKKERTPGSLG*RTNMPYSLWVDNII
Trigger: TATGATATTGTCCACCCACAAGGAGTATGGCATATTTGTCCTGCAGCCCAAGGATCCTGGAGTTCTTTCTTTCTTGAGGCAAAAGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR CCA 90 bp TCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGGGCATTaGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCT +
Preference number: 1 (lower is better)
Translates to: SADVIILWSGWKPGH*IEIKSLRLFLHVKP
Trigger: AGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR TCA 90 bp TGCATGACTGACTTATTCTCCCTCCCTCATTCTTTCCCGATGAACTaGAAGGTCTTCCATGCTCTGTTCAAATTGAATGTTGGCCAACAT +
Preference number: 1 (lower is better)
Translates to: CMTDLFSLPHSFPMN*KVFHALFKLNVGQH
Trigger: ATGTTGGCCAACATTCAATTTGAACAGAGCATGGAAGACCTTTCAGTTCATCGGGAAAGAATGAGGGAGGGAGAATAAGTCAGTCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
3UTR CCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTaGGAAAACCAGAAGGTTTGTTCCGCTTTCAATGGCTTGGCTCCT +
Preference number: 1 (lower is better)
Translates to: MPITILTKVESRVRS*ENQKVCSAFNGLAP
Trigger: AGGAGCCAAGCCATTGAAAGCGGAACAAACCTTCTGGTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR CCA 90 bp GCCGTGCCCCTTCTCGCCAGGCCCACAGCTCCACCATACTGTCCAGCCGGCCCAGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: AVPLLARPTAPPYCPAGPVFCLV*PRQQLP
Trigger: AGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC...TGGGCCGGCTGGACAGTATGGTGGAGCTGTGGGCCTGGCGAGAAGGGGCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp GGTCCAGGCACAGCCAGTGACCCAGTCACGGTGACAGGCAGGGAAGGAGTGGATGATCCCGGCCCCCGGTaGCCAGGCTGCCTCCATCAG +
Preference number: 2 (lower is better)
Translates to: GPGTASDPVTVTGREGVDDPGPR*PGCLHQ
Trigger: CTGATGGAGGCAGCCTGGCCACCGGGGGCCGGGATC...ATCCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCACTGGCTGTGCCTGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp CCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGCAGGGGCTGGTTGGCTaGCTGCTGGGGCAGGAGCCG +
Preference number: 2 (lower is better)
Translates to: PQRSQHSDDPGTDQAAVLQGLVG*LLGQEP
Trigger: CGGCTCCTGCCCCAGCAGGCAGCCAACCAGCCCCTG...CAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGGAAGGCAGCCAGCCGTaGCCCTTCTCGCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVEGSQP*PFSPGP
Trigger: TGGGCCTGGCGAGAAGGGGCACGGCTGGCTGCCTTC...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGGAAGGCAGCCAGCCGTaGCCCTTCTCGCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLEGSQP*PFSPGP
Trigger: TGGGCCTGGCGAGAAGGGGCACGGCTGGCTGCCTTC...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCAGCTGGGACTACAGGTaGCCGCCGCCACACCTGGCT +
Preference number: 2 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCSWDYR*PPPHLA
Trigger: AGCCAGGTGTGGCGGCGGGCACCTGTAGTCCCAGCT...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
3UTR CAA 90 bp CCCTCATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTG +
Preference number: 2 (lower is better)
Translates to: PSCPRSSVPQGKSSA*CGRVSSCLGHSCTV
Trigger: CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACATGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR CAA 90 bp GCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACCTaGGGGCTTAGCCAGGCCAGGGCGGACACTGCCACATCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: AQPCKDPSSAPLTNT*GLSQARADTATSSA
Trigger: GGCACTGGATGTGGCAGTGTCCGCCCTGGCCTGGCTAAGCCCCAAGGTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp GCCGTGCCCCTTCTCGCCAGGCCCACAGCTCCACCATACTGTCCAGCCGGCCCAAGGCTGGAGCTTTGCTaGTTTTTCATGGTCCGGGGT +
Preference number: 2 (lower is better)
Translates to: AVPLLARPTAPPYCPAGPRLELC*FFMVRG
Trigger: ACCCCGGACCATGAAAAATCAGCAAAGCTCCAGCCT...TGGGCCGGCTGGACAGTATGGTGGAGCTGTGGGCCTGGCGAGAAGGGGCACGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGTGCTGGAAGGCCAGCTaGCCACGGACTGTGTCCCAC +
Preference number: 2 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLCWKAS*PRTVSH
Trigger: GTGGGACACAGTCCGTGGGCAGCTGGCCTTCCAGCA...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCATGGGCCGGGCACAATaGCTCACGCCTCCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCMGRAQ*LTPPLG
Trigger: ACCCAGAGGAGGCGTGAGCCATTGTGCCCGGCCCAT...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
3UTR-3UTR TCA 90 bp CTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGGCCGGGGGTACTGGCTaGGGATTGAAGCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LHSCHSAHSTLMTQELTKAGGTG*GLKPAA
Trigger: GGCAGCAGGCTTCAATCCTCAGCCAGTACCCCCGGC...CTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGGATCACCATCTGGGCTaGGTGCCACAGAGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVDHHLG*VPQRGQ
Trigger: CTGCCCTCTCTGTGGCACTCAGCCCAGATGGTGATC...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAGATCACCATCTGGGCTaGGTGCCACAGAGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEADHHLG*VPQRGQ
Trigger: CTGCCCTCTCTGTGGCACTCAGCCCAGATGGTGATC...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp CCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGAGCTCCTGGGAAGTaGCCAGTCCTAGCACAGGCT +
Preference number: 2 (lower is better)
Translates to: PRSSVPQGKSSALCGRVSRAPGK*PVLAQA
Trigger: AGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCT...GCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp GTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: VPAAQCHRESLLPCVAASVFCLV*PRQQLP
Trigger: AGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC...TGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp AGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCCACGGACTGTGTCTCCCAAGCACACGGTaGCTAGCAGCCGGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: SSGTWGRCAGRPAAHGLCLPSTR*LAAGSL
Trigger: CAGACTGCCGGCTGCTAGCCACCGTGTGCTTGGGAG...ACACAGTCCGTGGGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCACAGCCCAGCTGCCTGTaGCTATTACCTGCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEAQPSCL*LLPAPL
Trigger: CAGAGGGGCAGGTAATAGCCACAGGCAGCTGGGCTG...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp CATCCTCTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGGTGACCCAGTCACGGTaGCAGGCAGGGAAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: HPLQPSVTGNPHAGKAQQVTQSR*QAGKEW
Trigger: CCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCAC...CTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAGAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp GCCATAACCGTGTGGCCCCATCTAGCCCGACGGTTACCACCAGAAGCTCTGACCTTGGTGGCAAAGAGGTaGGTCCAGGGGCTGGTTGGC +
Preference number: 2 (lower is better)
Translates to: AITVWPHLARRLPPEALTLVAKR*VQGLVG
Trigger: GCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAA...GGTCAGAGCTTCTGGTGGTAACCGTCGGGCTAGATGGGGCCACACGGTTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GGTCCAGGCACAGCCAGTGACCCAGTCACGGTGACAGGCAGGGAAGGAGTGGATGTCCCCGCAGCTCAGTaGCACAGGGAAAGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: GPGTASDPVTVTGREGVDVPAAQ*HRESLL
Trigger: CAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC...ATCCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCACTGGCTGTGCCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGCTCACAGACACCACGTaGTCCTCCACAGCTGCCACA +
Preference number: 2 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVLTDTT*SSTAAT
Trigger: TGTGGCAGCTGTGGAGGAGCACGTGGTGTCTGTGAG...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCTCACAGACACCACGTaGTCCTCCACAGCTGCCACA +
Preference number: 2 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLLTDTT*SSTAAT
Trigger: TGTGGCAGCTGTGGAGGAGCACGTGGTGTCTGTGAG...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCAGAAGGTGCGAAACACTaGAACGTCAGCCTCGGGGAG +
Preference number: 2 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPEGAKH*NVSLGE
Trigger: CTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTC...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGACCCAGTCAGGCTGGTTGGCTGCCTaGTGGGGCAGGAGCCGGGGG +
Preference number: 2 (lower is better)
Translates to: EQDISRLSLVQAQPVTQSGWLAA*WGRSRG
Trigger: CCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCAGCC...TGACTGGGTCACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCCCACAGCTGCTCTTTaGCCATTGGTGGAGAAGGCC +
Preference number: 2 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLPTAAL*PLVEKA
Trigger: GGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGG...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCAGGCAGTGCCCACAGCTaGTCTTTGCCCATTGGTGGA +
Preference number: 2 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPGSAHS*SLPIGG
Trigger: TCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCC...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCAGAGCTCCTGGGAAGTaGCCAGTCCTAGCACAGGCT +
Preference number: 2 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSRAPGK*PVLAQA
Trigger: AGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCT...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSVFCLV*PRQQLP
Trigger: AGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp CCGGGTGCCGAACCCTTCCGCAGTTTCACTTGCCACTCGCTGATTTTCTCATCATGGTTGGCTGCCTGCTaGGGCAGGAGCCGGGGGTAC +
Preference number: 2 (lower is better)
Translates to: PGAEPFRSFTCHSLIFSSWLAAC*GRSRGY
Trigger: GTACCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCA...TGATGAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAGGGTTCGGCACCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR-3UTR TCA 90 bp CATCCTCTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGTTGGTGGCAAAGAGGTaGGTCCAGGGGCTGGTTGGC +
Preference number: 2 (lower is better)
Translates to: HPLQPSVTGNPHAGKAQQLVAKR*VQGLVG
Trigger: GCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAA...CTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGTCAGGCAGCAGCCAGTaGTTTGGTACTGGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLSGSSQ*FGTGEP
Trigger: AGGCTCACCAGTACCAAATCACTGGCTGCTGCCTGA...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGCAGGGGCTGGTTGGCTaGCTGCTGGGGCAGGAGCCG +
Preference number: 2 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVQGLVG*LLGQEP
Trigger: CGGCTCCTGCCCCAGCAGGCAGCCAACCAGCCCCTG...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCCACACCAAGAGTGGATaGCATAACCGTGTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCHTKSG*HNRVAP
Trigger: TGGGGCCACACGGTTATGGCATCCACTCTTGGTGTG...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR-3UTR CCA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTAGAGCTCCTGGGAAGTaGCCAGTCCTAGCACAGGCT +
Preference number: 2 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTRAPGK*PVLAQA
Trigger: AGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCT...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp CCCTCATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCAGAGCTCCTGGGAAGTaGCCAGTCCTAGCACAGGCT +
Preference number: 2 (lower is better)
Translates to: PSCPRSSVPQGKSSALCGRAPGK*PVLAQA
Trigger: AGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCT...GCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACATGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp GTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCCCGGTGTGTGCAGCCACCACATaGAGGTTGGTAAGGAACTTC +
Preference number: 2 (lower is better)
Translates to: VLGVLTSQQRRLRSRPPVCAATT*RLVRNF
Trigger: GAAGTTCCTTACCAACCTCCATGTGGTGGCTGCACA...CACCGGGGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp AGGTGTGTGCCGAGGACCAGATCAGAGCACCAATGTGGCCTGGAGCCTGTGCTGGAGAGCAGCGAGGCTTaGTGGCAAAGAGGTGAGTCC +
Preference number: 2 (lower is better)
Translates to: RCVPRTRSEHQCGLEPVLESSEA*WQRGES
Trigger: GGACTCACCTCTTTGCCACCAAGCCTCGCTGCTCTC...CAGCACAGGCTCCAGGCCACATTGGTGCTCTGATCTGGTCCTCGGCACACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR-3UTR CCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGCACAGTTCAGGGACTTaGGGTAGGTGTGCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVHSSGT*GRCAGR
Trigger: CCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTG...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAGTGATTTGGTACTGGTaGGCCTTAGTCTGCAGCACC +
Preference number: 2 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEAVIWYW*ALVCST
Trigger: GGTGCTGCAGACTAAGGCTCACCAGTACCAAATCAC...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp CCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACAGGGAAAGTCTTCTaGCTTGTGTGGCCGCGTCAG +
Preference number: 2 (lower is better)
Translates to: PQRSQHSDDPGTDQAAVLTGKVF*LVWPRQ
Trigger: CTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGT...CAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp CTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGCAACAAGTGCTCCTCCACAGCTaGCACAGCGCTCACAGCACT +
Preference number: 2 (lower is better)
Translates to: LQPSVTGNPHAGKAQQQQVLLHS*HSAHST
Trigger: AGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC...TTGTTGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTCAGCATGAGGCCTGCTGCCTCAGGAAGGTaGGAAACACTGCAACGTCAG +
Preference number: 2 (lower is better)
Translates to: GTCQSRTEPSSEAVSMRPAASGR*ETLQRQ
Trigger: CTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCAGC...AGGCCTCATGCTGACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GGAAGGCAACACAGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCCTGAGGATTGAAGCCTaGTGCCTCAGGAAGGTGCGA +
Preference number: 2 (lower is better)
Translates to: GRQHSSGTWGRCAGRPAALRIEA*CLRKVR
Trigger: TCGCACCTTCCTGAGGCAGCAGGCTTCAATCCTCAG...GGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp ATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: MSPQLSATGKVFCLVWPRHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...ACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGCCTCCATCAGTGCTaGAACTACAGCAGCTCACAG +
Preference number: 2 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSCLHQC*NYSSSQ
Trigger: CTGTGAGCTGCTGTAGTTTCAGCACTGATGGAGGCA...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp AGTGACCATCAGGAGCCCAATCCAGACTTGTCAGCACCCCTAAGTCCTCCTGTAGTGACCCAGTCACGGTaGCAGGCAGGGAAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: SDHQEPNPDLSAPLSPPVVTQSR*QAGKEW
Trigger: CCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCAC...TACAGGAGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGTTCCTCTTTGGGGACTaGAGAAGCATAGAGGGCATG +
Preference number: 2 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVFLFGD*RSIEGM
Trigger: CATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAA...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACAGGAGCCGGGGGTACTaGCTGAGGATTGAAGCCTGC +
Preference number: 2 (lower is better)
Translates to: FLECPALQGPIFCTTHQYRSRGY*LRIEAC
Trigger: GCAGGCTTCAATCCTCAGCCAGTACCCCCGGCTCCT...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGACATCGTAGTGTGTGTTaGAGGTGCCATCTCCGGGAG +
Preference number: 2 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRHRSVC*RCHLRE
Trigger: CTCCCGGAGATGGCACCTCCAACACACACTACGATG...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp CCATCCGCTCGATATCCAACAGCCACCCGATCACCATCTGGGCTGAGTGCCACACACAGTTCAGGGACTTaGGGTAGGTGTGCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: PSARYPTATRSPSGLSATHSSGT*GRCAGR
Trigger: CCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTG...TGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGACACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp CTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGCAACAAGCCACAGCTGCACTGTaGAATCCTCTGAGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LQPSVTGNPHAGKAQQQQATAAL*NPLRQK
Trigger: CTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGC...TTGTTGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp CAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCACAGCAGTAGGGGATaGGGAAACTGCCAGAGACAG +
Preference number: 2 (lower is better)
Translates to: QGCWSAPRLDGPTLSRSHHSSRG*GNCQRQ
Trigger: CTGTCTCTGGCAGTTTCCTCATCCCCTACTGCTGTG...ATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACCTCACAGACACCACGTaGTCCTCCACAGCTGCCACA +
Preference number: 2 (lower is better)
Translates to: FLECPALQGPIFCTTHQYLTDTT*SSTAAT
Trigger: TGTGGCAGCTGTGGAGGAGCACGTGGTGTCTGTGAG...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACAGTGTGTGTTGGAGGTaGCATCTCCGGGAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: FLECPALQGPIFCTTHQYSVCWR*HLRESS
Trigger: GCTGCTCTCCCGGAGATGGCACCTCCAACACACACT...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAAGGGCTCCATGGCAGCTaGACAGTGGCTAATGGGTCC +
Preference number: 2 (lower is better)
Translates to: SGLHLARFHRIPSELAHKGLHGS*TVANGS
Trigger: GGACCCATTAGCCACTGTGCAGCTGCCATGGAGCCC...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR-3UTR CCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCCCACAGAGCCATCACTaGAGCAGGATATCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSPQSHH*SRISVG
Trigger: ACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGG...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACAGCAGCGAGGCTTGGTaGCAAAGAGGTGAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: FLECPALQGPIFCTTHQYSSEAW*QRGESR
Trigger: CCTGGACTCACCTCTTTGCCACCAAGCCTCGCTGCT...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp TGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGCTCATTCCTCTTTGGGGACTaGAGAAGCATAGAGGGCATG +
Preference number: 2 (lower is better)
Translates to: WSAPRLDGPTLSRSHPGSFLFGD*RSIEGM
Trigger: CATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAA...TGAGCCGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGAGCCCCCTGGGAACCTaGAGAGATTTTGTAGATCCT +
Preference number: 2 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPSPLGT*RDFVDP
Trigger: AGGATCTACAAAATCTCTTCAGGTTCCCAGGGGGCT...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp ATCTGCTTCCTTAGGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTCACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: ICFLRNLPEPYRTILRGGHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...ACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp GGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTGGTATACATGTGTCAGTGATTTGGTACTGGTaGGCCTTAGTCTGCAGCACC +
Preference number: 2 (lower is better)
Translates to: GAQATAVTAAELLGIHVSVIWYW*ALVCST
Trigger: GGTGCTGCAGACTAAGGCTCACCAGTACCAAATCAC...TGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGGTGTCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: GLANKTESIEPIGQVSLCGVSAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGACACC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR TCA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAACACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: SGLHLARFHRIPSELAHKHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR-3UTR TCA 90 bp AGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGGCCACAGCTGCACTGTaGAATCCTCTGAGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: SHHWSRISVGYLWSRHSQATAAL*NPLRQK
Trigger: CTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGC...CTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGATGCCCGGCCTCCTCTaGGTAGTTCTGAGAAAAGGG +
Preference number: 2 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQMPGLL*VVLRKG
Trigger: CCCTTTTCTCAGAACTACCCAGAGGAGGCCGGGCAT...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR CCA 90 bp GGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTGGTATACATGTGTCATGTGCAGCCACCACATaGAGGTTGGTAAGGAACTTC +
Preference number: 2 (lower is better)
Translates to: GAQATAVTAAELLGIHVSCAATT*RLVRNF
Trigger: GAAGTTCCTTACCAACCTCCATGTGGTGGCTGCACA...TGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR TCA 90 bp ACGGCTGCAGAACTCCTTGGTATACATGTGTCATCTGCTTCCTTAGGAACCTGCGCCACAGCTGCACTGTaGAATCCTCTGAGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: TAAELLGIHVSSASLGTCATAAL*NPLRQK
Trigger: CTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGC...GCAGGTTCCTAAGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATCTCATTCCTCCTCCTaGCAAGAATGGCATCCTAGG +
Preference number: 2 (lower is better)
Translates to: WQEWHPRVLGPASDARILSHSSS*QEWHPR
Trigger: CCTAGGATGCCATTCTTGCCAGGAGGAGGAATGAGA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
3UTR-3UTR CCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGCCGCTTTCAATGGCTTaGCTCCTCACCTCTCATCTG +
Preference number: 2 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQPLSMA*LLTSHL
Trigger: CAGATGAGAGGTGAGGAGCCAAGCCATTGAAAGCGG...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR CAA 90 bp AGCCCGAGTGAATCTTTCTACGCTGCCGTGTCTTTAGATGTGGTGTaGGCTCACTATCCATGCTGGCATCACTATCCATGCTGGCATCAG +
Preference number: 2 (lower is better)
Translates to: SPSESFYAAVSLDVV*AHYPCWHHYPCWHQ
Trigger: CTGATGCCAGCATGGATAGTGATGCCAGCATGGATAGTGAGCCAACACCACATCTAAAGACACGGCAGCGTAGAAAGATTCACTCGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR-3UTR GCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGTGTCTTCAGGCTTTaGATCTCTAGCACAAGGGGT +
Preference number: 2 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCSVFRL*ISSTRG
Trigger: ACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACT...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555008.5
3UTR-3UTR GCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATTTGCCCAGGCTGGAGTaGAGTGGTGTCTCGGCTCAC +
Preference number: 2 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHLPRLE*SGVSAH
Trigger: GTGAGCCGAGACACCACTGCACTCCAGCCTGGGCAA...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCTCCTCCTGGCAAGAATaGCATCCTAGGGTCCTAGGG +
Preference number: 2 (lower is better)
Translates to: GLANKTESIEPIGQVSLCSSWQE*HPRVLG
Trigger: CCCTAGGACCCTAGGATGCCATTCTTGCCAGGAGGA...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR CAA 90 bp TTCTGCCACATGTTACCTGTGGTCCATTCTCCTTCTGGGCTGCATTaGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAAAAT +
Preference number: 2 (lower is better)
Translates to: FCHMLPVVHSPSGLH*ARFHRIPSELAHKN
Trigger: ATTTTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACCACAGGTAACATGTGGCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR-3UTR TCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGGGCAGGAGAATCGCTTaGACCCAGGAAGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKGRRIA*TQEAEV
Trigger: AACCTCTGCTTCCTGGGTTCAAGCGATTCTCCTGCC...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR TCA 90 bp GAGTGTATCATCGGAGAGGAACAAACAAGCAGAGATTCCATCACAGCCACTCACAGGCTGGAGCTTTGCTaGTTTTTCATGGTCCGGGGT +
Preference number: 2 (lower is better)
Translates to: ECIIGEEQTSRDSITATHRLELC*FFMVRG
Trigger: ACCCCGGACCATGAAAAATCAGCAAAGCTCCAGCCT...GTGAGTGGCTGTGATGGAATCTCTGCTTGTTTGTTCCTCTCCGATGATACACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR GCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACAGTGTCTTCAGGCTTTaGATCTCTAGCACAAGGGGT +
Preference number: 2 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNSVFRL*ISSTRG
Trigger: ACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACT...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR TCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCTGAGGTCAGGAGTTTaGGACCCACCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHLRSGV*DPPGQH
Trigger: ATGTTGGCCAGGTGGGTCTCAAACTCCTGACCTCAG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR CCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATTCCTCCTGGCAAGAATaGCATCCTAGGGTCCTAGGG +
Preference number: 2 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHSSWQE*HPRVLG
Trigger: CCCTAGGACCCTAGGATGCCATTCTTGCCAGGAGGA...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGGCTCACGCCTCCTCTaGGTAGTTCTGAGAAAAGGG +
Preference number: 2 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHGSRLL*VVLRKG
Trigger: CCCTTTTCTCAGAACTACCCAGAGGAGGCGTGAGCC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553365.5
3UTR-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAATGTTCTAAATCCACATaGGAACACAGGCAGGCCTAC +
Preference number: 2 (lower is better)
Translates to: PRVLGPASDARILKPSFKCSKST*EHRQAY
Trigger: GTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACA...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
3UTR-3UTR TCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCCTAGGGCCCGCGAGTaGTGCAAGAATTCTAAAACC +
Preference number: 2 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHPRARE*CKNSKT
Trigger: GGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR TCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACCTAGGGCCCGCGAGTaGTGCAAGAATTCTAAAACC +
Preference number: 2 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPPRARE*CKNSKT
Trigger: GGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR TCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAGCCCTGATGCATGACTaGCTTATTCTCCCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPALMHD*LILPPS
Trigger: TGAGGGAGGGAGAATAAGTCAGTCATGCATCAGGGC...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACAGGCTGGAGTGCAGTaGTGTCTCGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKQAGVQ*CLGSLQ
Trigger: TTGCAGTGAGCCGAGACACCACTGCACTCCAGCCTG...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR TCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACTGTTCTAAATCCACATaGGAACACAGGCAGGCCTAC +
Preference number: 2 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHCSKST*EHRQAY
Trigger: GTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACA...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR TCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACTCTTTCCCGATGAACTaGAAGGTCTTCCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHSFPMN*KVFHAL
Trigger: CAGAGCATGGAAGACCTTTCAGTTCATCGGGAAAGA...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR TCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACAAATGCCCTGATGCATaGCTGACTTATTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHKCPDA*LTYSPS
Trigger: GGAGGGAGAATAAGTCAGTCATGCATCAGGGCATTT...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR GCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATAGTGTCTTCAGGCTTTaGATCTCTAGCACAAGGGGT +
Preference number: 2 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHSVFRL*ISSTRG
Trigger: ACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACT...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR CAA 90 bp ATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGGGCATaGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACC +
Preference number: 2 (lower is better)
Translates to: ISGCHHPLVRMETRA*DRNKVPQVISPCKT
Trigger: GGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR TCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCATGCTCTGTTCAAATTaGATGTTGGCCAACATCACT +
Preference number: 2 (lower is better)
Translates to: GLANKTESIEPIGQVSLCMLCSN*MLANIT
Trigger: AGTGATGTTGGCCAACATTCAATTTGAACAGAGCAT...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR GCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGAGAGTAAAACTCAGTaGCCTTTAACTCCCCAAGTC +
Preference number: 2 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHESKTQ*PLTPQV
Trigger: GACTTGGGGAGTTAAAGGGCACTGAGTTTTACTCTC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAGCCCGCCGCCACACCTaGCTAACTTTTTGTATTTTT +
Preference number: 2 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPARRHT*LTFCIF
Trigger: AAAAATACAAAAAGTTAGCCAGGTGTGGCGGCGGGC...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACAGTCGTGTCAGAAGTTaGGAAAACCAGAAGGTTTGT +
Preference number: 2 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHSRVRS*ENQKVC
Trigger: ACAAACCTTCTGGTTTTCCCAACTTCTGACACGACT...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR TCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACTCTTTCCCGATGAACTaGAAGGTCTTCCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: MPITILTKVESRVRSWENSFPMN*KVFHAL
Trigger: CAGAGCATGGAAGACCTTTCAGTTCATCGGGAAAGA...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGAAGCAAAGGCTAACCTaGTCAATAGATTCTTCCATA +
Preference number: 2 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWKQRLT*SIDSSI
Trigger: TATGGAAGAATCTATTGAGCAGGTTAGCCTTTGCTT...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR TCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACAAAGGGCTGTCTCTGTaGCAGAAACATAGCTCTTTC +
Preference number: 2 (lower is better)
Translates to: MPITILTKVESRVRSWENKGLSL*QKHSSF
Trigger: GAAAGAGCTATGTTTCTGTCACAGAGACAGCCCTTT...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR-3UTR TCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCATTTCGTGATCTCTTCTaGGAATGCCAATTACCATAT +
Preference number: 2 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPFRDLF*ECQLPY
Trigger: ATATGGTAATTGGCATTCTCAGAAGAGATCACGAAA...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR TCA 72 bp GGAACCCAGGTGCCCACGGGGCCGACCCAGAGACCCTaGCCACACCTGAACCTTGCCATCCTCTCCAGCCGT +
Preference number: 3 (lower is better)
Translates to: GTQVPTGPTQRP*PHLNLAILSSR
Trigger: ACGGCTGGAGAGGATGGCAAGGTTCAGGTGTGGTCAGGGTCTCTGGGTCGGCCCCGTGGGCACCTGGGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp TGGAGGTGCCATCTCCGGGAGAGCAGCGAGGCTTGGTaGCAAAGAGGTGAGTCCAGGGGCTGGTTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: WRCHLRESSEAW*QRGESRGWLAA
Trigger: GGCAGCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAAGCCTCGCTGCTCTCCCGGAGATGGCACCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp TGTCCCACAGCTTTAGGCATCCTCCCAAGCACACGGTaGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CPTALGILPSTR*LAAGSLGSGSS
Trigger: GCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTTGGGAGGATGCCTAAAGCTGTGGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp GCCCCTCTGGGTGGAAGGCAACACAGTTCAGGGACTTaGGGTAGGTGTGCTGGAAGGCCAGCTGCCCACGGA +
Preference number: 3 (lower is better)
Translates to: APLGGRQHSSGT*GRCAGRPAAHG
Trigger: TCCGTGGGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCCACCCAGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp GCATGCAGGAAAAGCGCAGCAGCAACAAAGCCATGGTaGGCAGGGAAGGCAGCCAGCCGTGCCCCTTCTCGC +
Preference number: 3 (lower is better)
Translates to: ACRKSAAATKPW*AGKAASRAPSR
Trigger: GCGAGAAGGGGCACGGCTGGCTGCCTTCCCTGCCCACCATGGCTTTGTTGCTGCTGCGCTTTTCCTGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGGTGCCCCCAGGTCCTaGGTGACTTTGAGCCCATCC +
Preference number: 3 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCGAPRS*VTLSPS
Trigger: GGATGGGCTCAAAGTCACCAAGGACCTGGGGGCACC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR-3UTR CAA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGC +
Preference number: 3 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEAGKSSA*CGRVSS
Trigger: GCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGC +
Preference number: 3 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLGKSSA*CGRVSS
Trigger: GCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR TCA 72 bp GGGCTCCATGGCAGCTGCACAGTGGCTAATGGGTCCTaGGTGAGCAGGGATGCTGGTCAGCTCCACGCCTTG +
Preference number: 3 (lower is better)
Translates to: GLHGSCTVANGS*VSRDAGQLHAL
Trigger: CAAGGCGTGGAGCTGACCAGCATCCCTGCTCACTCAGGACCCATTAGCCACTGTGCAGCTGCCATGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR GCA 72 bp ATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTaGCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: MSPQLSATGKVF*LVWPRQQLPWP
Trigger: TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR CCA 72 bp CAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCAC +
Preference number: 3 (lower is better)
Translates to: QLSATGKVFCLV*PRQQLPWPQLH
Trigger: GTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp AGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCCACGGACTGTGTGCCCACAGCTGCTCTTaGCCCATTGGTGGAGAAGGC +
Preference number: 3 (lower is better)
Translates to: SSGTWGRCAGRPAAHGLCAHSCS*PIGGEG
Trigger: GCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGC...ACACAGTCCGTGGGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR GCA 72 bp AGGAGCCGGGGGTACTGGCTGAGGATTGAAGCCTGCTaGCTCAGGAAGGTGCGAAACACTGCAACGTCAGCC +
Preference number: 3 (lower is better)
Translates to: RSRGYWLRIEAC*LRKVRNTATSA
Trigger: GGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCAGCAGGCTTCAATCCTCAGCCAGTACCCCCGGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR GCA 72 bp GGCAGGAGCCGGGGGTACTGGCTGAGGATTGAAGCCTaGTGCCTCAGGAAGGTGCGAAACACTGCAACGTCA +
Preference number: 3 (lower is better)
Translates to: GRSRGYWLRIEA*CLRKVRNTATS
Trigger: TGACGTTGCAGTGTTTCGCACCTTCCTGAGGCAGCAGGCTTCAATCCTCAGCCAGTACCCCCGGCTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR GCA 72 bp CTGATGCTGCCAGCCCAGCTGCCTGTGGCTATTACCTaGCCCTCTGGGTGGAAGGCAACACAGTTCAGGGAC +
Preference number: 3 (lower is better)
Translates to: LMLPAQLPVAIT*PSGWKATQFRD
Trigger: GTCCCTGAACTGTGTTGCCTTCCACCCAGAGGGGCAGGTAATAGCCACAGGCAGCTGGGCTGGCAGCATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR GCA 72 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTaGAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: KYTLPCTSPTAS*RVELAPSQGSR
Trigger: CCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
3UTR-3UTR CAA 90 bp AGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGATCAAAACAGGGGTTTaGGGTGTCCTCACGTCCCAG +
Preference number: 3 (lower is better)
Translates to: SCHSAHSTLMTQELTKPLIKTGV*GVLTSQ
Trigger: CTGGGACGTGAGGACACCCAAAACCCCTGTTTTGAT...CAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGATCAGTAGGTTATCTTaGGTCCAGGCACAGCCAGTG +
Preference number: 3 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLISRLS*VQAQPV
Trigger: CACTGGCTGTGCCTGGACCAAAGATAACCTACTGAT...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR GCA 72 bp GGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTaGCTTGGCCACAGCTGCACTGTGAAATCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: GKSSALCGRVSS*LGHSCTVKSSE
Trigger: CTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR CCA 72 bp ATCCGCTCGATATCCAACAGCCACCCGATCACCATCTaGGCTGAGTGCCACAGAGAGGGCAGGAGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: IRSISNSHPITI*AECHREGRRER
Trigger: TCTCTCTCTCCTGCCCTCTCTGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp GGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTaGCCCCATCTAGCCCGACGGTTACCACCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: GFGTPRVDAITV*PHLARRLPPEA
Trigger: AGCTTCTGGTGGTAACCGTCGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp GATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGATCAAAACAGGGGTTTaGGGTGTCCTCACGTCCCAG +
Preference number: 3 (lower is better)
Translates to: DAGQLHALMVPHFQGPIPIKTGV*GVLTSQ
Trigger: CTGGGACGTGAGGACACCCAAAACCCCTGTTTTGAT...CGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp GGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTCAGCATGAGGCCTAGACAGGCTGGAGCTTaGCTGATTTTTCATGGTCCG +
Preference number: 3 (lower is better)
Translates to: GTCQSRTEPSSEAVSMRPRQAGA*LIFHGP
Trigger: CGGACCATGAAAAATCAGCAAAGCTCCAGCCTGTCT...AGGCCTCATGCTGACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR TCA 72 bp TCTTTGGTCCAGGCACAGCCAGTGACCCAGTCACGGTaGCAGGCAGGGAAGGAGTGGATCAAAACAGGGGTT +
Preference number: 3 (lower is better)
Translates to: SLVQAQPVTQSR*QAGKEWIKTGV
Trigger: AACCCCTGTTTTGATCCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCACTGGCTGTGCCTGGACCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR TCA 72 bp TTGCCCATTGGTGGAGAAGGCCACAGCAGTAGGGGATaGGGAAACTGCCAGAGACAGGCTGGAGCTTTGCTG +
Preference number: 3 (lower is better)
Translates to: LPIGGEGHSSRG*GNCQRQAGALL
Trigger: CAGCAAAGCTCCAGCCTGTCTCTGGCAGTTTCCTCATCCCCTACTGCTGTGGCCTTCTCCACCAATGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp ATGGTCCGGGGTTTATTAAGCCATCGTAGTGTGTGTTaGAGGTGCCATCTCCGGGAGAGCAGCGAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: MVRGLLSHRSVC*RCHLRESSEAW
Trigger: CCAAGCCTCGCTGCTCTCCCGGAGATGGCACCTCCAACACACACTACGATGGCTTAATAAACCCCGGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCATCTCCTACAAGTCCTaGAATTCTTGGCCACAGAAG +
Preference number: 3 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCISYKS*NSWPQK
Trigger: CTTCTGTGGCCAAGAATTCAAGGACTTGTAGGAGAT...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
3UTR-3UTR CAA 90 bp CCATTGGCAGTGCCCACAGCTGCTCTTTGCCCATTGGTGGAGAAGGCCACAGCAGCCACCACATGGAGGTaGGTAAGGAACTTCGAAAGA +
Preference number: 3 (lower is better)
Translates to: PLAVPTAALCPLVEKATAATTWR*VRNFER
Trigger: TCTTTCGAAGTTCCTTACCAACCTCCATGTGGTGGC...TGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp CATCCTCTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGGCCACCACATGGAGGTaGGTAAGGAACTTCGAAAGA +
Preference number: 3 (lower is better)
Translates to: HPLQPSVTGNPHAGKAQQATTWR*VRNFER
Trigger: TCTTTCGAAGTTCCTTACCAACCTCCATGTGGTGGC...CTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR GCA 72 bp CAACAGGTAAACTGTCCCATTGGCAGTGCCCACAGCTaGTCTTTGCCCATTGGTGGAGAAGGCCACAGCAGT +
Preference number: 3 (lower is better)
Translates to: QQVNCPIGSAHS*SLPIGGEGHSS
Trigger: ACTGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCCAATGGGACAGTTTACCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp CCCAGCTTGATTTCCAGATACTGCCATGGAACCATCTaGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACT +
Preference number: 3 (lower is better)
Translates to: PSLISRYCHGTI*CPSHSSDGCRT
Trigger: AGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACCAGATGGTTCCATGGCAGTATCTGGAAATCAAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGCCTGAGGTCAGGAGTTaGAGACCCACCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQPEVRS*RPTWPT
Trigger: TGTTGGCCAGGTGGGTCTCAAACTCCTGACCTCAGG...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR CCA 72 bp TGTTACCTGTGGTCCATTCTCCTTCTGGGCTGCATTTaGCCAGGTTCCATAGGATCCCATCAGAGCTGGCAC +
Preference number: 3 (lower is better)
Translates to: CYLWSILLLGCI*PGSIGSHQSWH
Trigger: GTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACCACAGGTAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR GCA 72 bp CTTGGTATACATGTGTCATCTGCTTCCTTAGGAACCTaGCAGAGCCGTACAGAACCATCCTCAGAGGCGGTC +
Preference number: 3 (lower is better)
Translates to: LGIHVSSASLGT*QSRTEPSSEAV
Trigger: GACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGATGACACATGTATACCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp GAGACCAGACCCAATTCCAAGTGTGCAGCCACCACATaGAGGTTGGTAAGGAACTTCGAAAGAAGTCCACGG +
Preference number: 3 (lower is better)
Translates to: ETRPNSKCAATT*RLVRNFERSPR
Trigger: CCGTGGACTTCTTTCGAAGTTCCTTACCAACCTCCATGTGGTGGCTGCACACTTGGAATTGGGTCTGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp TGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTaGTATACATGTGTCATCTGCTTCCTTAGGAACCTG +
Preference number: 3 (lower is better)
Translates to: CPSHSSDGCRTP*YTCVICFLRNL
Trigger: CAGGTTCCTAAGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR-3UTR CAA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGTCCGCTTTCAATGGCTaGGCTCCTCACCTCTCATCT +
Preference number: 3 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQSAFNG*APHLSS
Trigger: AGATGAGAGGTGAGGAGCCAAGCCATTGAAAGCGGA...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR GCA 72 bp GCCGTGTCTTTAGATGTGGTGTTGGCTCACTATCCATaGTGGCATCACTATCCATGCTGGCATCAGATTCCC +
Preference number: 3 (lower is better)
Translates to: AVSLDVVLAHYP*WHHYPCWHQIP
Trigger: GGGAATCTGATGCCAGCATGGATAGTGATGCCAGCATGGATAGTGAGCCAACACCACATCTAAAGACACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR CCA 72 bp ACTATCCATGCTGGCATCAGATTCCCTGCAGGTAGATaGGTCTGTCCCTGGAGTTTGGGTTTCTGGAGTGTT +
Preference number: 3 (lower is better)
Translates to: TIHAGIRFPAGR*VCPWSLGFWSV
Trigger: AACACTCCAGAAACCCAAACTCCAGGGACAGACCCATCTACCTGCAGGGAATCTGATGCCAGCATGGATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR CCA 72 bp GGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATaGAAACCAGGGCATTGGATAGAAATAAAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: GLSADVIILWSG*KPGHWIEIKSL
Trigger: GAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR CCA 72 bp TGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTaGCACACAAAAATGAGGACTCAGATTCAGGTTTGG +
Preference number: 3 (lower is better)
Translates to: CIWPGSIGSHQS*HTKMRTQIQVW
Trigger: CCAAACCTGAATCTGAGTCCTCATTTTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR TCA 72 bp AGTAACTTCAAATCTGCTTTGGCCAAGATGAGAAAGTaGCCATCAGGAGCCCAATCCAGACTTGTCAGCACC +
Preference number: 3 (lower is better)
Translates to: SNFKSALAKMRK*PSGAQSRLVST
Trigger: GGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACTTTCTCATCTTGGCCAAAGCAGATTTGAAGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CCA 72 bp AAGTTGGGAAAACCAGAAGGTTTGTTCCGCTTTCAATaGCTTGGCTCCTCACCTCTCATCTGGGTAGTTCTT +
Preference number: 3 (lower is better)
Translates to: KLGKPEGLFRFQ*LGSSPLIWVVL
Trigger: AAGAACTACCCAGATGAGAGGTGAGGAGCCAAGCCATTGAAAGCGGAACAAACCTTCTGGTTTTCCCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR CCA 72 bp GTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTaGCATGAGGCACATAAGAGAAGACAGAAGCATGGC +
Preference number: 3 (lower is better)
Translates to: VEMMVQKVYFEA*HEAHKRRQKHG
Trigger: GCCATGCTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR CAA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGGGAAAACCAGAAGGTTaGTTCCGCTTTCAATGGCTT +
Preference number: 3 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKGKPEG*FRFQWL
Trigger: AAGCCATTGAAAGCGGAACAAACCTTCTGGTTTTCC...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
3UTR TCA 72 bp TCATGCAAAGTAACTTCAAATCTGCTTTGGCCAAGATaGGAAAGTGACCATCAGGAGCCCAATCCAGACTTG +
Preference number: 3 (lower is better)
Translates to: SCKVTSNLLWPR*ESDHQEPNPDL
Trigger: CAAGTCTGGATTGGGCTCCTGATGGTCACTTTCTCATCTTGGCCAAAGCAGATTTGAAGTTACTTTGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR GCA 72 bp GGCAAAAGATTGAAATCAATGACTAGGATGATGCCATaGCATAGTTCGCTGCAGGATTTCTGGCAAGGATTA +
Preference number: 3 (lower is better)
Translates to: GKRLKSMTRMMP*HSSLQDFWQGL
Trigger: TAATCCTTGCCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAATCTTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR-3UTR CAA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAATCTCCTACAAGTCCTaGAATTCTTGGCCACAGAAG +
Preference number: 3 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVISYKS*NSWPQK
Trigger: CTTCTGTGGCCAAGAATTCAAGGACTTGTAGGAGAT...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR TCA 72 bp GACTTATTCTCCCTCCCTCATTCTTTCCCGATGAACTaGAAGGTCTTCCATGCTCTGTTCAAATTGAATGTT +
Preference number: 3 (lower is better)
Translates to: DLFSLPHSFPMN*KVFHALFKLNV
Trigger: AACATTCAATTTGAACAGAGCATGGAAGACCTTTCAGTTCATCGGGAAAGAATGAGGGAGGGAGAATAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
3UTR TCA 72 bp CCCTGTAATAGCCTTCACTTATCTCCTACAAGTCCTTaGATTCTTGGCCACAGAAGACATTTCCTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: PCNSLHLSPTSP*ILGHRRHFLLL
Trigger: AAGAAGAAGGAAATGTCTTCTGTGGCCAAGAATTCAAGGACTTGTAGGAGATAAGTGAAGGCTATTACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR TCA 72 bp GCACACAAAAATGAGGACTCAGATTCAGGTTTGGCTTaGGTTATCGATATTAGGGTCCTACTAGGATTCTCT +
Preference number: 3 (lower is better)
Translates to: AHKNEDSDSGLA*VIDIRVLLGFS
Trigger: AGAGAATCCTAGTAGGACCCTAATATCGATAACTCAAGCCAAACCTGAATCTGAGTCCTCATTTTTGTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
3UTR CCA 72 bp ACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTaGGAAAACCAGAAGGTTTGTTCCGCTTTCAATGGC +
Preference number: 3 (lower is better)
Translates to: TILTKVESRVRS*ENQKVCSAFNG
Trigger: GCCATTGAAAGCGGAACAAACCTTCTGGTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GCCGTGCCCCTTCTCGCCAGGCCCACAGCTCCACCATACTGTCCAGCCGGCCCACACTGCCACATCCAGTaGCTGACCCTGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: AVPLLARPTAPPYCPAGPHCHIQ*LTLSPL
Trigger: CAGGGGGCTCAGGGTCAGGCACTGGATGTGGCAGTG...TGGGCCGGCTGGACAGTATGGTGGAGCTGTGGGCCTGGCGAGAAGGGGCACGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCGATCCCGGCCCCCGGTaGCCAGGCTGCCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: PRSSVPQGKSSALCGRVSDPGPR*PGCLHQ
Trigger: CTGATGGAGGCAGCCTGGCCACCGGGGGCCGGGATC...GCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GCCGTGCCCCTTCTCGCCAGGCCCACAGCTCCACCATACTGTCCAGCCGGCCCAGATCACCATCTGGGCTaGGTGCCACAGAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: AVPLLARPTAPPYCPAGPDHHLG*VPQRGQ
Trigger: CTGCCCTCTCTGTGGCACTCAGCCCAGATGGTGATC...TGGGCCGGCTGGACAGTATGGTGGAGCTGTGGGCCTGGCGAGAAGGGGCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGGCTGGTTGGCTGCCTaGTGGGGCAGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATAGWLAA*WGRSRG
Trigger: CCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCAGCC...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCCCGGTGGGCCAGGGCGGACACTaGCACATCCAGTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: VLGVLTSQQRRLRSRPPVGQGGH*HIQCLT
Trigger: GGTCAGGCACTGGATGTGGCAGTGTCCGCCCTGGCC...CACCGGGGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACTGGAGGCTCCATCCCTaGAGAGCGGGGTGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: PQGKSSALCGRVSSCLGHWRLHP*RAGWPA
Trigger: CGCCGGCCACCCCGCTCTCCAGGGATGGAGCCTCCA...GTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGCTGGTTGGCTGCCTaGTGGGGCAGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GCWSAPRLDGPTLSRSHPGWLAA*WGRSRG
Trigger: CCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCAGCC...GGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCGAAAGGGAACCCAGGTaGCCACGGGGCCGACCCAGA +
Preference number: 4 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPEREPR*PRGRPR
Trigger: TCTGGGTCGGCCCCGTGGGCACCTGGGTTCCCTTTC...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGCAAGACAGTGCGGCCTaGCAGCAGGGGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQQDSAA*QQGQAV
Trigger: CACAGCCTGCCCCTGCTGCCAGGCCGCACTGTCTTG...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCGTCTGGGATGGACACTaGCTGCTCCAGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSVWDGH*LLQQGP
Trigger: GGGGCCCTGCTGGAGCAGCCAGTGTCCATCCCAGAC...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGATCCCGGCCCCCGGTaGCCAGGCTGCCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATADPGPR*PGCLHQ
Trigger: CTGATGGAGGCAGCCTGGCCACCGGGGGCCGGGATC...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
3UTR CAA 72 bp CCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PRSSVPQGKSSA*CGRVSSCLGHS
Trigger: GCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCCGATTCCGTGAAGGCTaGTACGGTGAGGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSRFREG*YGEGPL
Trigger: GAGCGGCCCCTCACCGTATCAGCCTTCACGGAATCG...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGCCACCTGGAAGAAGCTaGTGCTGCCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQPPGRS*CCQPSC
Trigger: GCAGCTGGGCTGGCAGCATCAGCTTCTTCCAGGTGG...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCGGTGGCTTCTGCAGCTaGTGGAAGGTGGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSGGFCS*WKVAWT
Trigger: GGTCCAGGCCACCTTCCAGCAGCTGCAGAAGCCACC...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGGGCACCCTGGCTCTaGTCAAGGGTCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHWAPWL*SRVSPR
Trigger: CCTAGGGGAGACCCTTGAGCAGAGCCAGGGTGCCCA...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CCATCCGCTCGATATCCAACAGCCACCCGATCACCATCTGGGCTGAGTGCCACACAGGGGCTGGTTGGCTaGCTGCTGGGGCAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: PSARYPTATRSPSGLSATQGLVG*LLGQEP
Trigger: CGGCTCCTGCCCCAGCAGGCAGCCAACCAGCCCCTG...TGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCTGCTGGAAGGCCAGCTaGCCACGGACTGTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSCWKAS*PRTVSH
Trigger: GTGGGACACAGTCCGTGGGCAGCTGGCCTTCCAGCA...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACGATAGAGGCTCCGGGTaGCCCCAGGTCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHDRGSG*PQVLGD
Trigger: GTCACCAAGGACCTGGGGGCACCCGGAGCCTCTATC...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp ATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTGAAGGCAGCCAGCCGTaGCCCTTCTCGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: MSPQLSATGKVFCLVWPREGSQP*PFSPGP
Trigger: TGGGCCTGGCGAGAAGGGGCACGGCTGGCTGCCTTC...ACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGAAGGCAACACAGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCGAAGGCAGCCAGCCGTaGCCCTTCTCGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GRQHSSGTWGRCAGRPAAEGSQP*PFSPGP
Trigger: TGGGCCTGGCGAGAAGGGGCACGGCTGGCTGCCTTC...GGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGGGCGGGGGTGTCTCTTaGCCCGGTGCTTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: VLLHSCHSAHSTLMTQELGGGVS*PGASEG
Trigger: ACCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCC...CAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCCCCTGGAGAGCGGGGTaGCCGGCGGGGGTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTPWRAG*PAGVSL
Trigger: AAGAGACACCCCCGCCGGCCACCCCGCTCTCCAGGG...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GCCGTGCCCCTTCTCGCCAGGCCCACAGCTCCACCATACTGTCCAGCCGGCCCAGACCAAGTCATCGTCTaGGATGGACACTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AVPLLARPTAPPYCPAGPDQVIV*DGHWLL
Trigger: GAGCAGCCAGTGTCCATCCCAGACGATGACTTGGTC...TGGGCCGGCTGGACAGTATGGTGGAGCTGTGGGCCTGGCGAGAAGGGGCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCTCAGCCTTCCGTaGGGCAGCATCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSRLSLP*GSISRC
Trigger: GCAACGGCTGATGCTGCCCCACGGAAGGCTGAGCCT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTCCCAAGGCCAGCACGTaGGCACCCTGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VFCLVWPRQQLPWPQLHCPKAST*APWLCS
Trigger: TGAGCAGAGCCAGGGTGCCCACGTGCTGGCCTTGGG...ACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGGCAGCAGGGGGACAGTaGCAGGCAGGGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRAAGGQ*QAGSGV
Trigger: GACTCCGGACCCTGCCTGCCACTGTCCCCCTGCTGC...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGATCCCGGCCCCCGGTaGCCAGGCTGCCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELADPGPR*PGCLHQ
Trigger: CTGATGGAGGCAGCCTGGCCACCGGGGGCCGGGATC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCGATCCCGGCCCCCGGTaGCCAGGCTGCCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTDPGPR*PGCLHQ
Trigger: CTGATGGAGGCAGCCTGGCCACCGGGGGCCGGGATC...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGTCCAGGCACAGCCAGTGACCCAGTCACGGTGACAGGCAGGGAAGGAGTGGATAGCAGCAGCACGGACTaGGCCGCTGTGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPGTASDPVTVTGREGVDSSSTD*AAVSQE
Trigger: CTCCTGGGACACAGCGGCCCAGTCCGTGCTGCTGCT...ATCCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCACTGGCTGTGCCTGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGGGTCTCCTCCTCAGTaGCGCCCCAGCGGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAGSPPQ*RPSGGR
Trigger: TCGACCTCCGCTGGGGCGTCACTGAGGAGGAGACCC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGCCTCAGGTGATCGGTaGCCAAGCGCAGGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCASGDR*PSAGRA
Trigger: CGCTCTACCTGCGCTTGGTCACCGATCACCTGAGGC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCCGACCCAGAGACCCTaGCCACACCTGAACCTTGCC +
Preference number: 4 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLPTQRP*PHLNLA
Trigger: GGCAAGGTTCAGGTGTGGTCAGGGTCTCTGGGTCGG...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCCCGACCCAGAGACCCTaGCCACACCTGAACCTTGCC +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCPTQRP*PHLNLA
Trigger: GGCAAGGTTCAGGTGTGGTCAGGGTCTCTGGGTCGG...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACCGACCCAGAGACCCTaGCCACACCTGAACCTTGCC +
Preference number: 4 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPPTQRP*PHLNLA
Trigger: GGCAAGGTTCAGGTGTGGTCAGGGTCTCTGGGTCGG...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGGTGACCCAGTCACGGTaGCAGGCAGGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVVTQSR*QAGKEW
Trigger: CCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCAC...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAGTGACCCAGTCACGGTaGCAGGCAGGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEAVTQSR*QAGKEW
Trigger: CCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCAC...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACCCCAAGCCACAGCAGTaGCGGCTGCAGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHPKPQQ*RLQNSL
Trigger: CAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGG...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGATAGACCAAGACAGTaGGGCCTGGCAGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQDRPRQ*GLAAGA
Trigger: TGCCCCTGCTGCCAGGCCGCACTGTCTTGGTCTATC...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGCACGACGTCCACCTaGTCCGCCCTCGTGATCATC +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSSTTST*SALVII
Trigger: GATGATCACGAGGGCGGAGCAGGTGGACGTCGTGCT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGGGGCCGCTCGGGCCTaGAGTGCTGGCAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTGAARA*SAGSTD
Trigger: GTCTGTGCTGCCAGCACTGCAGGCCCGAGCGGCCCC...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGGGATGGACACTGGCTaGTCCAGCAGGGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAGMDTG*SSRAPG
Trigger: GCCTGGGGCCCTGCTGGAGCAGCCAGTGTCCATCCC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGGTGGCTTCTGCAGCTaGTGGAAGGTGGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCGGFCS*WKVAWT
Trigger: GGTCCAGGCCACCTTCCAGCAGCTGCAGAAGCCACC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACCAGGAAGGCTGTCTTaGCCTGTCCTGACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPPGRLS*PVLTAP
Trigger: CGGGGCAGTCAGGACAGGGCAAGACAGCCTTCCTGG...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGACCCGACAACCATGCTaGAGGTCCCAGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQTRQPC*RSQSSR
Trigger: CCTGGAGCTCTGGGACCTGCAGCATGGTTGTCGGGT...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGGCCAGGGCGGACACTaGCACATCCAGTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTGQGGH*HIQCLT
Trigger: GGTCAGGCACTGGATGTGGCAGTGTCCGCCCTGGCC...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGGCCAGGGCGGACACTaGCACATCCAGTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATAGQGGH*HIQCLT
Trigger: GGTCAGGCACTGGATGTGGCAGTGTCCGCCCTGGCC...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGGAGCATTCCTTGAGTaGCCAGCCCTGCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQGAFLE*PALQGP
Trigger: GGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCC...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTTGCCCAGGCTGGAGTaGAGTGGTGTCTCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHLPRLE*SGVSAH
Trigger: GTGAGCCGAGACACCACTGCACTCCAGCCTGGGCAA...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR CCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAAATATCGTCGCAGGTaGGGGCGACACGCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSKYRRR*GRHAGK
Trigger: CTTGCCGGCGTGTCGCCCCCACCTGCGACGATATTT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACAGTGTCCTCTTCCAGTaGCCGGAGAGACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHSVLFQ*PERLDP
Trigger: GGGGTCCAGTCTCTCCGGCCACTGGAAGAGGACACT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTCCGGGCAGGACTCGGTaGCTTCTGCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VFCLVWPRQQLPWPQLHCPGRTR*LLQLLE
Trigger: TTCCAGCAGCTGCAGAAGCCACCGAGTCCTGCCCGG...ACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CCCTCATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCGTCCTGAAGAAGGCGTaGCCGGGCAGGACTCGGTGG +
Preference number: 4 (lower is better)
Translates to: PSCPRSSVPQGKSSALCGVLKKA*PGRTRW
Trigger: CCACCGAGTCCTGCCCGGCCACGCCTTCTTCAGGAC...GCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACATGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGTGAGGGCAAGACCCTaGTCAGGACGAGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQVRARP*SGRAPE
Trigger: TTCTGGGGCTCGTCCTGACCAGGGTCTTGCCCTCAC...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACGGGACTCAGCAGACTTaGGCAGCAGCCTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHGTQQT*AAASAA
Trigger: TGCAGCAGAGGCTGCTGCCCAAGTCTGCTGAGTCCC...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGAGGCAAACGGGCCCATaGGGTAGGGGTCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQRQTGP*GRGLHC
Trigger: ACAGTGGAGACCCCTACCCCATGGGCCCGTTTGCCT...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGGAGCCAGTGGTTGGCTGCCTGCTaGGGCAGGAGCCGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SWEVASPSTGFWNLDRSQWLAAC*GRSRGY
Trigger: GTACCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCA...CTGGCTCCTGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGCAGCCCAGCTGCCTGTaGCTATTACCTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQQPSCL*LLPAPL
Trigger: CAGAGGGGCAGGTAATAGCCACAGGCAGCTGGGCTG...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTTTGGCCAAGGAGGATaGCCCTGTCCACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHFGQGG*PCPQEP
Trigger: GGGTTCCTGTGGACAGGGTCATCCTCCTTGGCCAAA...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp AGCATAGAGGGCATGGGCCTCCAAGAGCCGAGAGACCAGACCCAATTCCAAGTGGGGTCTCCTCCTCAGTaGCGCCCCAGCGGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: SIEGMGLQEPRDQTQFQVGSPPQ*RPSGGR
Trigger: TCGACCTCCGCTGGGGCGTCACTGAGGAGGAGACCC...CACTTGGAATTGGGTCTGGTCTCTCGGCTCTTGGAGGCCCATGCCCTCTATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGGCCTCAGGTGATCGGTaGCCAAGCGCAGGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRASGDR*PSAGRA
Trigger: CGCTCTACCTGCGCTTGGTCACCGATCACCTGAGGC...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCGCCGGGGGTACTGGCTaGGGATTGAAGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTAGGTG*GLKPAA
Trigger: GGCAGCAGGCTTCAATCCTCAGCCAGTACCCCCGGC...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGCCACCTGGAAGAAGCTaGTGCTGCCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PQRSQHSDDPGTDQAAVLPPGRS*CCQPSC
Trigger: GCAGCTGGGCTGGCAGCATCAGCTTCTTCCAGGTGG...CAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTCCGACCCAGAGACCCTaGCCACACCTGAACCTTGCC +
Preference number: 4 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTPTQRP*PHLNLA
Trigger: GGCAAGGTTCAGGTGTGGTCAGGGTCTCTGGGTCGG...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGAAGGGAGCATTCCTTaGGTGCCCAGCCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCEGSIP*VPSPAR
Trigger: CCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCAGAAGGGAGCATTCCTTaGGTGCCCAGCCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPEGSIP*VPSPAR
Trigger: CCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTC...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCCCGGTGAGGAGCCAGAGGGACTaGAGGGAGCATTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: VLGVLTSQQRRLRSRPPVRSQRD*REHSLS
Trigger: ACTCAAGGAATGCTCCCTTCAGTCCCTCTGGCTCCT...CACCGGGGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCCCGGTGGCCACAGCTGCACTGTaGAATCCTCTGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VLGVLTSQQRRLRSRPPVATAAL*NPLRQK
Trigger: CTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGC...CACCGGGGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCAGTGACCCAGTCACGGTaGCAGGCAGGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ESLLPCVAASAAALATAAVTQSR*QAGKEW
Trigger: CCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCAC...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCCCCAAGCCACAGCAGTaGCGGCTGCAGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: GKSSALCGRVSSCLGHSCPKPQQ*RLQNSL
Trigger: CAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGG...GCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCTTCCAGGCAGCTCACTaGCCCTTCGCATCGGAACAG +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSFQAAH*PFASEQ
Trigger: CTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAA...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCGTAGAGCGGCCGGCCTaGTTCCCGCTGGTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSVERPA*FPLVVK
Trigger: TTTAACAACCAGCGGGAATCAGGCCGGCCGCTCTAC...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR GCA 90 bp CCATCCGCTCGATATCCAACAGCCACCCGATCACCATCTGGGCTGAGTGCCACACGCTCGGGCCTGCAGTaGTGGCAGCACAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: PSARYPTATRSPSGLSATRSGLQ*WQHRPQ
Trigger: CTGAGGTCTGTGCTGCCAGCACTGCAGGCCCGAGCG...TGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGTCCTGCAGAACCAACTaGCCAAACTCCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQSCRTN*PNSSSP
Trigger: CGGGCTGGAGGAGTTTGGGCAGTTGGTTCTGCAGGA...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATGGGATGGACACTGGCTaGTCCAGCAGGGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QGCWSAPRLDGPTLSRSHGMDTG*SSRAPG
Trigger: GCCTGGGGCCCTGCTGGAGCAGCCAGTGTCCATCCC...ATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCTGGGTCTGGCCAGGATaGAGGGACTCAGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSWVWPG*RDSADL
Trigger: CAAGTCTGCTGAGTCCCTGCATCCTGGCCAGACCCA...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCGAAGGTGCGAAACACTaGAACGTCAGCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSEGAKH*NVSLGE
Trigger: CTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTC...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGCCCACAGCTGCTCTTTaGCCATTGGTGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQPTAAL*PLVEKA
Trigger: GGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGG...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAACCCGACAACCATGCTaGAGGTCCCAGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPAAQCHRESLLPCVAASTRQPC*RSQSSR
Trigger: CCTGGAGCTCTGGGACCTGCAGCATGGTTGTCGGGT...TGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCACTGCCACATCCAGTaGCTGACCCTGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRHCHIQ*LTLSPL
Trigger: CAGGGGGCTCAGGGTCAGGCACTGGATGTGGCAGTG...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CCATCCGCTCGATATCCAACAGCCACCCGATCACCATCTGGGCTGAGTGCCACAGGCCAGGGCGGACACTaGCACATCCAGTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: PSARYPTATRSPSGLSATGQGGH*HIQCLT
Trigger: GGTCAGGCACTGGATGTGGCAGTGTCCGCCCTGGCC...TGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCGTCCCCGCAGCTCAGTaGCACAGGGAAAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSVPAAQ*HRESLL
Trigger: CAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCGTCCCCGCAGCTCAGTaGCACAGGGAAAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPVPAAQ*HRESLL
Trigger: CAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCTCCACAGGAACCCTTTaGCCAGCCAGAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPSTGTL*PARDSR
Trigger: CCTGCTGTCTCTGGCTGGCCAAAGGGTTCCTGTGGA...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTTCGGGCCTGCAGTGCTaGCAGCACAGACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTSGLQC*QHRPQQ
Trigger: CTGCTGAGGTCTGTGCTGCCAGCACTGCAGGCCCGA...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CATCCTCTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGGTCTGGGATGGACACTaGCTGCTCCAGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: HPLQPSVTGNPHAGKAQQVWDGH*LLQQGP
Trigger: GGGGCCCTGCTGGAGCAGCCAGTGTCCATCCCAGAC...CTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAGAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTGCTGGAAGGTaGCCTGGACCAAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQAAAGR*PGPSHR
Trigger: ACGATGACTTGGTCCAGGCCACCTTCCAGCAGCTGC...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGAGGCTCAGCCTTCCGTaGGGCAGCATCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: VLLHSCHSAHSTLMTQELRLSLP*GSISRC
Trigger: GCAACGGCTGATGCTGCCCCACGGAAGGCTGAGCCT...CAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCAAGGCAAACGGGCCCATaGGGTAGGGGTCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPRQTGP*GRGLHC
Trigger: ACAGTGGAGACCCCTACCCCATGGGCCCGTTTGCCT...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTCAGCATGAGGCCTCTCCCAAGCACACGGTaGCTAGCAGCCGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GTCQSRTEPSSEAVSMRPLPSTR*LAAGSL
Trigger: CAGACTGCCGGCTGCTAGCCACCGTGTGCTTGGGAG...AGGCCTCATGCTGACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCCAGCCCAGCTGCCTGTaGCTATTACCTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GKSSALCGRVSSCLGHSCQPSCL*LLPAPL
Trigger: CAGAGGGGCAGGTAATAGCCACAGGCAGCTGGGCTG...GCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGCAACAAAGCCATGGTaGGCAGGGAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCATKPW*AGKAAS
Trigger: GCTGGCTGCCTTCCCTGCCCACCATGGCTTTGTTGC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAACAAAGCCATGGTaGGCAGGGAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VPAAQCHRESLLPCVAASATKPW*AGKAAS
Trigger: GCTGGCTGCCTTCCCTGCCCACCATGGCTTTGTTGC...TGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCCACCCGATCACCATCTaGGCTGAGTGCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSHPITI*AECHRE
Trigger: CTCTCTGTGGCACTCAGCCCAGATGGTGATCGGGTG...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCAGAGCTCCTGGGAAGTaGCCAGTCCTAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPRAPGK*PVLAQA
Trigger: AGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCT...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEAVFCLV*PRQQLP
Trigger: AGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGGATGCCATAACCGTGTaGCCCCATCTAGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLDAITV*PHLARR
Trigger: CCGTCGGGCTAGATGGGGCCACACGGTTATGGCATC...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTGATGCCATAACCGTGTaGCCCCATCTAGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: KHTVASSRQSGLRQQPVIDAITV*PHLARR
Trigger: CCGTCGGGCTAGATGGGGCCACACGGTTATGGCATC...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GCCGTGCCCCTTCTCGCCAGGCCCACAGCTCCACCATACTGTCCAGCCGGCCCATTCCAGATACTGCCATaGAACCATCTGGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: AVPLLARPTAPPYCPAGPFQILP*NHLVPK
Trigger: CTTGGGCACCAGATGGTTCCATGGCAGTATCTGGAA...TGGGCCGGCTGGACAGTATGGTGGAGCTGTGGGCCTGGCGAGAAGGGGCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGATGGGCCGGGCACAATaGCTCACGCCTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRMGRAQ*LTPPLG
Trigger: ACCCAGAGGAGGCGTGAGCCATTGTGCCCGGCCCAT...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR TCA 90 bp CCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCCTTGAGCCTGGAGCTTaGTGGCAGTCTTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: PRSSVPQGKSSALCGRVSLEPGA*WQSSGC
Trigger: GCATCCTGAAGACTGCCATCAAGCTCCAGGCTCAAG...GCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGTAGCTCTTCAGTTCTaGGATCCGACGTGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCVALQF*DPTCGL
Trigger: GAGGCCGCACGTCGGATCTCAGAACTGAAGAGCTAC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGCGTTGCACTGTGTCCTaGAGAAGGCGTGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: DAGQLHALMVPHFQGPIPRCTVS*RRRGRA
Trigger: TGCCCGGCCACGCCTTCTTCAGGACACAGTGCAACG...CGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGTAGAGCGGCCGGCCTaGTTCCCGCTTCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTVERPA*FPLHQQ
Trigger: CTGCTGGTGAAGCGGGAATCAGGCCGGCCGCTCTAC...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAAGTGAAGAGCCTCAGGTaGTCGGTGACCAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKVKSLR*SVTKRR
Trigger: CCTGCGCTTGGTCACCGATCACCTGAGGCTCTTCAC...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGTTGGTGGCAAAGAGGTaGGTCCAGGGGCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: VLLHSCHSAHSTLMTQELLVAKR*VQGLVG
Trigger: GCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAA...CAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCATTGGTGGCAAAGAGGTaGGTCCAGGGGCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: ESLLPCVAASAAALATAALVAKR*VQGLVG
Trigger: GCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAA...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAGACCCTGACCACACCTaGACCTTGCCATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEADPDHT*TLPSSP
Trigger: TGGAGAGGATGGCAAGGTTCAGGTGTGGTCAGGGTC...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGGTGGCTAATGGGTCCTaGGTGAGCAGGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLVANGS*VSRDAG
Trigger: ACCAGCATCCCTGCTCACTCAGGACCCATTAGCCAC...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCGTGGCTAATGGGTCCTaGGTGAGCAGGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: GKSSALCGRVSSCLGHSCVANGS*VSRDAG
Trigger: ACCAGCATCCCTGCTCACTCAGGACCCATTAGCCAC...GCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGATGGTCTTGATCTCCTaGCCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQMVLIS*PRDLPT
Trigger: GGTGGGCAGATCACGAGGTCAGGAGATCAAGACCAT...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR TCA 90 bp CCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACCATGTCTTCCAGAGCTaGGCTGCGCAGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PQGKSSALCGRVSSCLGHHVFQS*AAQTLD
Trigger: GTCCAGAGTCTGCGCAGCTCAGCTCTGGAAGACATG...GTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGAGGTCCCGCTCCCCATaGATGTCTCGGAAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQRSRSP*MSRKVD
Trigger: ATCCACTTTCCGAGACATGCATGGGGAGCGGGACCT...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCGCTTGGGCAGAGGGCTaGAGACGTTGGTTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSAWAEG*RRWFRF
Trigger: GAACCGGAACCAACGTCTGCAGCCCTCTGCCCAAGC...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGACTCGGTGGCTTCTaGAGCTGCTGGAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GCWSAPRLDGPTLSRSHPGLGGF*SCWKVA
Trigger: GGCCACCTTCCAGCAGCTGCAGAAGCCACCGAGTCC...GGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGTTGCCCTGTCCTGACTaGCCCGTCACCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPLPCPD*PVTRLS
Trigger: GCTGAGCCTGGTGACGGGGCAGTCAGGACAGGGCAA...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CCATTGGCAGTGCCCACAGCTGCTCTTTGCCCATTGGTGGAGAAGGCCACAGCATTGGGCAGCAGCCTCTaGTGCAGCTCCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: PLAVPTAALCPLVEKATALGSSL*CSSHTR
Trigger: CCTGGTGTGGGAGCTGCAGCAGAGGCTGCTGCCCAA...TGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCCAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGTGGGTCTGGCCAGGATaGAGGGACTCAGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVWVWPG*RDSADL
Trigger: CAAGTCTGCTGAGTCCCTGCATCCTGGCCAGACCCA...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACGCTCCTTCTCCAGTGTaGTCAGGATGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHAPSPV*SGCAAA
Trigger: TGCTGCAGCACATCCTGAGCACACTGGAGAAGGAGC...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAGGACATCAGGCCCGTaGTCCTTCTCCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVRTSGP*SFSSVL
Trigger: GAGCACACTGGAGAAGGAGCACGGGCCTGATGTCCT...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTGAAGGTGCGAAACACTaGAACGTCAGCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: KHTVASSRQSGLRQQPVIEGAKH*NVSLGE
Trigger: CTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTC...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCTGCCTCAGGAAGGTaGGAAACACTGCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQAASGR*ETLQRQ
Trigger: CTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCAGC...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCCTGAGGATTGAAGCCTaGTGCCTCAGGAAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSLRIEA*CLRKVR
Trigger: TCGCACCTTCCTGAGGCAGCAGGCTTCAATCCTCAG...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp AGTGACCATCAGGAGCCCAATCCAGACTTGTCAGCACCCCTAAGTCCTCCTGTACAGGGGCTGGTTGGCTaGCTGCTGGGGCAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SDHQEPNPDLSAPLSPPVQGLVG*LLGQEP
Trigger: CGGCTCCTGCCCCAGCAGGCAGCCAACCAGCCCCTG...TACAGGAGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCACCCACAGCTGCTCTTTaGCCATTGGTGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VPAAQCHRESLLPCVAASPTAAL*PLVEKA
Trigger: GGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGG...TGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCTGCTGGAAGGCCAGCTaGCCACGGACTGTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: EHSLSAQPCKDPSSAPLTCWKAS*PRTVSH
Trigger: GTGGGACACAGTCCGTGGGCAGCTGGCCTTCCAGCA...GGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGTGCTGCCAGCCCAGCTaGCTGTGGCTATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: VLLHSCHSAHSTLMTQELCCQPS*LWLLPA
Trigger: GGCAGGTAATAGCCACAGGCAGCTGGGCTGGCAGCA...CAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTGCTGCCAGCCCAGCTaGCTGTGGCTATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: SCHSAHSTLMTQELTKPLCCQPS*LWLLPA
Trigger: GGCAGGTAATAGCCACAGGCAGCTGGGCTGGCAGCA...CAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGCAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCGATAGAGGCTCCGGGTaGCCCCAGGTCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRDAGQLHALMVPHFQGPDRGSG*PQVLGD
Trigger: GTCACCAAGGACCTGGGGGCACCCGGAGCCTCTATC...GGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGCTCAGATAGAGGCTCCGGGTaGCCCCAGGTCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: WSAPRLDGPTLSRSHPGSDRGSG*PQVLGD
Trigger: GTCACCAAGGACCTGGGGGCACCCGGAGCCTCTATC...TGAGCCGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTGGTATACATGTGTCAGAAGGCAGCCAGCCGTaGCCCTTCTCGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GAQATAVTAAELLGIHVSEGSQP*PFSPGP
Trigger: TGGGCCTGGCGAGAAGGGGCACGGCTGGCTGCCTTC...TGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAACTGGCAACCCGCATaGAGGAAAAGCGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSNWQPA*RKSAAA
Trigger: TGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGAAAGGGAACCCAGGTaGCCACGGGGCCGACCCAGA +
Preference number: 4 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTEREPR*PRGRPR
Trigger: TCTGGGTCGGCCCCGTGGGCACCTGGGTTCCCTTTC...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCACTGCCACATCCAGTaGCTGACCCTGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LHSCHSAHSTLMTQELTKHCHIQ*LTLSPL
Trigger: CAGGGGGCTCAGGGTCAGGCACTGGATGTGGCAGTG...CTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGCTCACACTGCCACATCCAGTaGCTGACCCTGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: WSAPRLDGPTLSRSHPGSHCHIQ*LTLSPL
Trigger: CAGGGGGCTCAGGGTCAGGCACTGGATGTGGCAGTG...TGAGCCGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGGAGCATTCCTTGAGTaGCCAGCCCTGCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTGAFLE*PALQGP
Trigger: GGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCC...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACACAGGGAAAGTCTTCTaGCTTGTGTGGCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHTGKVF*LVWPRQ
Trigger: CTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGTGCTCCTCCACAGCTaGCACAGCGCTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATAVLLHS*HSAHST
Trigger: AGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CCCTCATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCGGGCTCCATGGCAGCTaGACAGTGGCTAATGGGTCC +
Preference number: 4 (lower is better)
Translates to: PSCPRSSVPQGKSSALCGGLHGS*TVANGS
Trigger: GGACCCATTAGCCACTGTGCAGCTGCCATGGAGCCC...GCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACATGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCGGGCTCCATGGCAGCTaGACAGTGGCTAATGGGTCC +
Preference number: 4 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSGLHGS*TVANGS
Trigger: GGACCCATTAGCCACTGTGCAGCTGCCATGGAGCCC...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGTGGCCTGGAGCCTGTaGTGTGGCCACAGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAVAWSL*CGHSLS
Trigger: GCTAAGGCTGTGGCCACAGCACAGGCTCCAGGCCAC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGAACAGGCCCAGCAGCTaGATACTGGGTCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQNRPSS*ILGLSH
Trigger: ATGGGAGAGACCCAGTATGCAGCTGCTGGGCCTGTT...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGTCTCCCACGGCAAGCTaGAGGGTGGAGTTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELASPTAS*RVELAP
Trigger: GGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGA...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGAGTGGCCGGAGAGACTaGACCCCTGTCTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PQRSQHSDDPGTDQAAVLSGRRD*TPVFPG
Trigger: CCCAGGAAAGACAGGGGTCCAGTCTCTCCGGCCACT...CAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCCCTGAAGGGTACTGCTaGGCCCAGTGGAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCPEGYC*AQWKCG
Trigger: TCCACACTTCCACTGGGCCCAGCAGTACCCTTCAGG...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACGCAGCAGGGGGACAGTaGCAGGCAGGGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYAAGGQ*QAGSGV
Trigger: GACTCCGGACCCTGCCTGCCACTGTCCCCCTGCTGC...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGCACTCCGTGCAGCTaGTCCACAGTCAAACCACTC +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSSTPCS*STVKPL
Trigger: GAGTGGTTTGACTGTGGACCAGCTGCACGGAGTGCT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGAGGCAAACGGGCCCATaGGGTAGGGGTCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: VLLHSCHSAHSTLMTQELRQTGP*GRGLHC
Trigger: ACAGTGGAGACCCCTACCCCATGGGCCCGTTTGCCT...CAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCAAACTGCGCAGACTCTaGACGAGGCAGGCAAACGGG +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCKLRRL*TRQANG
Trigger: CCCGTTTGCCTGCCTCGTCCAGAGTCTGCGCAGTTT...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR CCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTAGGAGCCGGGGGTACTaGCTGAGGATTGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATARSRGY*LRIEAC
Trigger: GCAGGCTTCAATCCTCAGCCAGTACCCCCGGCTCCT...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACGAGAGCAGCGAGGCTTaGTGGCAAAGAGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PQGKSSALCGRVSSCLGHESSEA*WQRGES
Trigger: GGACTCACCTCTTTGCCACCAAGCCTCGCTGCTCTC...GTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACCATCGTAGTGTGTGTTaGAGGTGCCATCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHHRSVC*RCHLRE
Trigger: CTCCCGGAGATGGCACCTCCAACACACACTACGATG...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCTCCCAAGCACACGGTaGCTAGCAGCCGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELALPSTR*LAAGSL
Trigger: CAGACTGCCGGCTGCTAGCCACCGTGTGCTTGGGAG...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCAGCAACAAAGCCATGGTaGGCAGGGAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESLLPCVAASAAALATAAATKPW*AGKAAS
Trigger: GCTGGCTGCCTTCCCTGCCCACCATGGCTTTGTTGC...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCAGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ESLLPCVAASAAALATAAVFCLV*PRQQLP
Trigger: AGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp ATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTGATGCCATAACCGTGTaGCCCCATCTAGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: MSPQLSATGKVFCLVWPRDAITV*PHLARR
Trigger: CCGTCGGGCTAGATGGGGCCACACGGTTATGGCATC...ACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCTGTCCCAGGAGGGTGTaGGTTTGGCACACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSCPRRV*VWHTKS
Trigger: ACTCTTGGTGTGCCAAACCCACACCCTCCTGGGACA...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGAGCAGCAGCACGGACTaGGCCGCTGTGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGSSSTD*AAVSQE
Trigger: CTCCTGGGACACAGCGGCCCAGTCCGTGCTGCTGCT...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACATCAGAGCACCAATGTaGCCTGGAGCCTGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHIRAPM*PGACAV
Trigger: CACAGCACAGGCTCCAGGCCACATTGGTGCTCTGAT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACGGCTCACGCCTCCTCTaGGTAGTTCTGAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHGSRLL*VVLRKG
Trigger: CCCTTTTCTCAGAACTACCCAGAGGAGGCGTGAGCC...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR CCA 90 bp GGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGAGCTGCGCAGACTCTaGACGAGGCAGGCAAACGGG +
Preference number: 4 (lower is better)
Translates to: GCWSAPRLDGPTLSRSHPELRRL*TRQANG
Trigger: CCCGTTTGCCTGCCTCGTCCAGAGTCTGCGCAGCTC...GGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GCCGTGCCCCTTCTCGCCAGGCCCACAGCTCCACCATACTGTCCAGCCGGCCCAGTTCATGTTTACTTCTaGGACCAGAGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: AVPLLARPTAPPYCPAGPVHVYF*DQSRAQ
Trigger: CTGTGCTCTACTCTGGTCTCAGAAGTAAACATGAAC...TGGGCCGGCTGGACAGTATGGTGGAGCTGTGGGCCTGGCGAGAAGGGGCACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GCCGTGCCCCTTCTCGCCAGGCCCACAGCTCCACCATACTGTCCAGCCGGCCCACTTGGAAAACATCTGTaGGAAAATGGAGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: AVPLLARPTAPPYCPAGPLGKHL*ENGGSI
Trigger: GATGGAGCCTCCATTTTCTCACAGATGTTTTCCAAG...TGGGCCGGCTGGACAGTATGGTGGAGCTGTGGGCCTGGCGAGAAGGGGCACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACGCTTCCCATTTTCAATaGGTTCCTCCCAGACCGACG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHASHFQ*VPPRPT
Trigger: CGTCGGTCTGGGAGGAACTCATTGAAAATGGGAAGC...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GAAGCCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGCGATTCCGTGAAGGCTaGTACGGTGAGGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: EAKSSWEVASPSTGFWNLRFREG*YGEGPL
Trigger: GAGCGGCCCCTCACCGTATCAGCCTTCACGGAATCG...CAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACACCTGCTCATACAGCGTaGAGAGCCTCAGGTGATCGG +
Preference number: 4 (lower is better)
Translates to: HRESLLPCVAASAAALATPAHTA*RASGDR
Trigger: CCGATCACCTGAGGCTCTTCACGCTGTATGAGCAGG...TGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGTCAAACCACTCCGTGTaGCTTCTAGGGCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQSNHSV*LLGQSR
Trigger: CCTTGACTGCCCTAGAAGTCACACGGAGTGGTTTGA...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp TCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGGAGCCAGGATCACCATCTGGGCTaGGTGCCACAGAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWEVASPSTGFWNLDRSQDHHLG*VPQRGQ
Trigger: CTGCCCTCTCTGTGGCACTCAGCCCAGATGGTGATC...CTGGCTCCTGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGAAGGGAGCATTCCTTaGGTGCCCAGCCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GCWSAPRLDGPTLSRSHPEGSIP*VPSPAR
Trigger: CCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTC...GGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTAGGAGCCAGAGGGACTaGAGGGAGCATTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: VFCLVWPRQQLPWPQLHCRSQRD*REHSLS
Trigger: ACTCAAGGAATGCTCCCTTCAGTCCCTCTGGCTCCT...ACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACCACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGGCCACAGCTGCACTGTaGAATCCTCTGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLATAAL*NPLRQK
Trigger: CTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGC...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGGCCACAGCTGCACTGTaGAATCCTCTGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVATAAL*NPLRQK
Trigger: CTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGC...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGGTCAGCTCCACGCCTTaGTGGTCCCACACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVVSSTP*WSHTFK
Trigger: CTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGAC...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACACTAATGGGTCCTGAGTaGGCAGGGATGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HRESLLPCVAASAAALATLMGPE*AGMLVS
Trigger: GCTGACCAGCATCCCTGCTCACTCAGGACCCATTAG...TGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp AGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCCACGGACTGTGTGTGGCTAATGGGTCCTaGGTGAGCAGGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSGTWGRCAGRPAAHGLCVANGS*VSRDAG
Trigger: ACCAGCATCCCTGCTCACTCAGGACCCATTAGCCAC...ACACAGTCCGTGGGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CCATTGGCAGTGCCCACAGCTGCTCTTTGCCCATTGGTGGAGAAGGCCACAGCACCCAAGCCACAGCAGTaGCGGCTGCAGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLAVPTAALCPLVEKATAPKPQQ*RLQNSL
Trigger: CAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGG...TGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCCAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAAGCACATGGAGGGCTGTaGCAGAGCCCGAGTGAATCT +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKAHGGL*QSPSES
Trigger: AGATTCACTCGGGCTCTGTCACAGCCCTCCATGTGC...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTCATGTCTTCCAGAGCTaGGCTGCGCAGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTHVFQS*AAQTLD
Trigger: GTCCAGAGTCTGCGCAGCTCAGCTCTGGAAGACATG...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTCGGACGTTCAGCTGCTaGCTGGCATACAAAGATGCC +
Preference number: 4 (lower is better)
Translates to: VFCLVWPRQQLPWPQLHCRTFSC*LAYKDA
Trigger: GGCATCTTTGTATGCCAGGCAGCAGCTGAACGTCCG...ACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp AGCAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCGATAGACCAAGACAGTaGGGCCTGGCAGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SRDAGQLHALMVPHFQGPDRPRQ*GLAAGA
Trigger: TGCCCCTGCTGCCAGGCCGCACTGTCTTGGTCTATC...GGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACAGCACGACGTCCACCTaGTCCGCCCTCGTGATCATC +
Preference number: 4 (lower is better)
Translates to: GAFLECPALQGPIFCTTHSTTST*SALVII
Trigger: GATGATCACGAGGGCGGAGCAGGTGGACGTCGTGCT...GTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTTCCTGCAGAACCAACTaGCCAAACTCCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTSCRTN*PNSSSP
Trigger: CGGGCTGGAGGAGTTTGGGCAGTTGGTTCTGCAGGA...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGGGACTCGGTGGCTTCTaGAGCTGCTGGAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGGLGGF*SCWKVA
Trigger: GGCCACCTTCCAGCAGCTGCAGAAGCCACCGAGTCC...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCACACTCAGCACTCCGTaGAGCTGGTCCACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSTLSTP*SWSTVK
Trigger: TTTGACTGTGGACCAGCTGCACGGAGTGCTGAGTGT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAAGGCAACTTCGGAAGGTaGCTGAGGCATCAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKGNFGR*LRHQRH
Trigger: GTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCC...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCGCTGCCTCAGGAAGGTaGGAAACACTGCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: GKSSALCGRVSSCLGHSCAASGR*ETLQRQ
Trigger: CTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCAGC...GCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGATTGAAGCCTGCTaGCTCAGGAAGGTGCGAAAC +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSRIEAC*LRKVRN
Trigger: GTTTCGCACCTTCCTGAGGCAGCAGGCTTCAATCCT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp AGGTGTGTGCCGAGGACCAGATCAGAGCACCAATGTGGCCTGGAGCCTGTGCTGAGTGTGTGTTGGAGGTaGCATCTCCGGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RCVPRTRSEHQCGLEPVLSVCWR*HLRESS
Trigger: GCTGCTCTCCCGGAGATGGCACCTCCAACACACACT...CAGCACAGGCTCCAGGCCACATTGGTGCTCTGATCTGGTCCTCGGCACACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCGGCAGTGCCCACAGCTaGTCTTTGCCCATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSGSAHS*SLPIGG
Trigger: TCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCC...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTCAGCATGAGGCCTGGCAGTGCCCACAGCTaGTCTTTGCCCATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GTCQSRTEPSSEAVSMRPGSAHS*SLPIGG
Trigger: TCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCC...AGGCCTCATGCTGACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGAGCACCCGACAACCATaGTGCAGGTCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DAGQLHALMVPHFQGPIPSTRQP*CRSQSS
Trigger: GGAGCTCTGGGACCTGCAGCATGGTTGTCGGGTGCT...CGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATTGCTGGAAGGCCAGCTaGCCACGGACTGTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGCWSAPRLDGPTLSRSHCWKAS*PRTVSH
Trigger: GTGGGACACAGTCCGTGGGCAGCTGGCCTTCCAGCA...ATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTAACTGGCAACCCGCATaGAGGAAAAGCGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VFCLVWPRQQLPWPQLHCNWQPA*RKSAAA
Trigger: TGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTT...ACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGTCCAGGCACAGCCAGTGACCCAGTCACGGTGACAGGCAGGGAAGGAGTGGATAACTGGCAACCCGCATaGAGGAAAAGCGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPGTASDPVTVTGREGVDNWQPA*RKSAAA
Trigger: TGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTT...ATCCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCACTGGCTGTGCCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCACAGGGAAAGTCTTCTaGCTTGTGTGGCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSTGKVF*LVWPRQ
Trigger: CTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGT...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGAAGGCAACACAGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCGTCCCCGCAGCTCAGTaGCACAGGGAAAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GRQHSSGTWGRCAGRPAAVPAAQ*HRESLL
Trigger: CAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC...GGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGCAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCGTGCTCCTCCACAGCTaGCACAGCGCTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: SRDAGQLHALMVPHFQGPVLLHS*HSAHST
Trigger: AGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC...GGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAACTCACAGACACCACGTaGTCCTCCACAGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKLTDTT*SSTAAT
Trigger: TGTGGCAGCTGTGGAGGAGCACGTGGTGTCTGTGAG...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACACTCACAGACACCACGTaGTCCTCCACAGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: HRESLLPCVAASAAALATLTDTT*SSTAAT
Trigger: TGTGGCAGCTGTGGAGGAGCACGTGGTGTCTGTGAG...TGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGGGCTCCATGGCAGCTaGACAGTGGCTAATGGGTCC +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAGLHGS*TVANGS
Trigger: GGACCCATTAGCCACTGTGCAGCTGCCATGGAGCCC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGGGGCTCCATGGCAGCTaGACAGTGGCTAATGGGTCC +
Preference number: 4 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPGLHGS*TVANGS
Trigger: GGACCCATTAGCCACTGTGCAGCTGCCATGGAGCCC...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAAGTACACATTGCCCTaGACGTCTCCCACGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PQGKSSALCGRVSSCLGHKYTLP*TSPTAS
Trigger: GCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT...GTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTCAGAAAGTACACATTaGCCTGCACGTCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHSESTH*PARLPR
Trigger: CCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGA...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGTCAGAAAGTACACATTaGCCTGCACGTCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQSESTH*PARLPR
Trigger: CCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGA...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCCAGCGGGGGCCCTTGTaGGTTGCTCTTTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTQRGPL*VALWTE
Trigger: CTCTGTCCAAAGAGCAACCCACAAGGGCCCCCGCTG...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTCAGCATGAGGCCTGAGGGCTGCAGACGTTaGTTCCGGTTCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: GTCQSRTEPSSEAVSMRPEGCRR*FRFRNC
Trigger: GCAGTTCCTGAACCGGAACCAACGTCTGCAGCCCTC...AGGCCTCATGCTGACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGTGCTGGAAGGTGGCCTaGACCAAGTCATCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRCWKVA*TKSSSG
Trigger: CCCAGACGATGACTTGGTCCAGGCCACCTTCCAGCA...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp ATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTTGCTGGAAGGTGGCCTaGACCAAGTCATCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: MSPQLSATGKVFCLVWPRCWKVA*TKSSSG
Trigger: CCCAGACGATGACTTGGTCCAGGCCACCTTCCAGCA...ACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACGGGACTCAGCAGACTTaGGCAGCAGCCTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GAFLECPALQGPIFCTTHGTQQT*AAASAA
Trigger: TGCAGCAGAGGCTGCTGCCCAAGTCTGCTGAGTCCC...GTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAAGCACTCCGTGCAGCTaGTCCACAGTCAAACCACTC +
Preference number: 4 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEASTPCS*STVKPL
Trigger: GAGTGGTTTGACTGTGGACCAGCTGCACGGAGTGCT...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTCAGCATGAGGCCTAGCAGCGAGGCTTGGTaGCAAAGAGGTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTCQSRTEPSSEAVSMRPSSEAW*QRGESR
Trigger: CCTGGACTCACCTCTTTGCCACCAAGCCTCGCTGCT...AGGCCTCATGCTGACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCAAGCAGCGAGGCTTGGTaGCAAAGAGGTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ESLLPCVAASAAALATAASSEAW*QRGESR
Trigger: CCTGGACTCACCTCTTTGCCACCAAGCCTCGCTGCT...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp AGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCCACGGACTGTGTGAGAGCAGCGAGGCTTaGTGGCAAAGAGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSGTWGRCAGRPAAHGLCESSEA*WQRGES
Trigger: GGACTCACCTCTTTGCCACCAAGCCTCGCTGCTCTC...ACACAGTCCGTGGGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCACATCGTAGTGTGTGTTaGAGGTGCCATCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEAHRSVC*RCHLRE
Trigger: CTCCCGGAGATGGCACCTCCAACACACACTACGATG...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTCACAGTTCAGGGACTTaGGGTAGGTGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KHTVASSRQSGLRQQPVIHSSGT*GRCAGR
Trigger: CCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTG...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCTTGAGCCCATCCACCTaGAAGAAGCTGATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSLSPST*KKLMLP
Trigger: TGGCAGCATCAGCTTCTTCCAGGTGGATGGGCTCAA...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGGCAACAAAGCCATGGTaGGCAGGGAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPATKPW*AGKAAS
Trigger: GCTGGCTGCCTTCCCTGCCCACCATGGCTTTGTTGC...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAACACCCGATCACCATCTaGGCTGAGTGCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKHPITI*AECHRE
Trigger: CTCTCTGTGGCACTCAGCCCAGATGGTGATCGGGTG...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGAGAGCTCCTGGGAAGTaGCCAGTCCTAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PQRSQHSDDPGTDQAAVLRAPGK*PVLAQA
Trigger: AGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCT...CAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAAGAGCTCCTGGGAAGTaGCCAGTCCTAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: HRESLLPCVAASAAALATRAPGK*PVLAQA
Trigger: AGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCT...TGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCAGAGCTCCTGGGAAGTaGCCAGTCCTAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSRAPGK*PVLAQA
Trigger: AGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCT...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAVFCLV*PRQQLP
Trigger: AGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGAGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRVFCLV*PRQQLP
Trigger: AGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTVFCLV*PRQQLP
Trigger: AGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCAGTGAGCAGGGATGCTaGTCAGCTCCACGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: GKSSALCGRVSSCLGHSCSEQGC*SAPRLD
Trigger: ATCAAGGCGTGGAGCTGACCAGCATCCCTGCTCACT...GCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAAGGAGGGTGTGGGTTTaGCACACCAAGAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEARRVWV*HTKSGC
Trigger: GCATCCACTCTTGGTGTGCCAAACCCACACCCTCCT...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGCTTCTGGGCTGCATTTaGCCAGGTTCCATAGGATCC +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQLLGCI*PGSIGS
Trigger: GGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAG...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCAGGCTGGAGTGCAGTaGTGTCTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRQAGVQ*CLGSLQ
Trigger: TTGCAGTGAGCCGAGACACCACTGCACTCCAGCCTG...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR CCA 90 bp GCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCTGAGCTGCGCAGACTCTaGACGAGGCAGGCAAACGGG +
Preference number: 4 (lower is better)
Translates to: ASGRCETLQRQPRGAFVPELRRL*TRQANG
Trigger: CCCGTTTGCCTGCCTCGTCCAGAGTCTGCGCAGCTC...AGGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
3UTR CAA 72 bp TGCAAGGACCCATCTTCTGCACCACTCACCAATACCTaGGGGCTTAGCCAGGCCAGGGCGGACACTGCCACA +
Preference number: 4 (lower is better)
Translates to: CKDPSSAPLTNT*GLSQARADTAT
Trigger: TGTGGCAGTGTCCGCCCTGGCCTGGCTAAGCCCCAAGGTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTCCCTTAGAGAAATGCTaGGCCCTCCAACTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATAPLEKC*ALQLGG
Trigger: GCCTCCAAGTTGGAGGGCTCAGCATTTCTCTAAGGG...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCTCAGTAGGCTCTGGATaGGATTCAGAGTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPSVGSG*DSESPE
Trigger: CTCTGGAGACTCTGAATCTCATCCAGAGCCTACTGA...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGGGAGTCTCTGGAGAATaGGCTCATGGTGGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPGVSGE*AHGGGN
Trigger: GTTCCCGCCACCATGAGCTCATTCTCCAGAGACTCC...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCTCAAACTCCTGGACTTaGGCCTGGAGCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCSNSWT*AWSLMA
Trigger: TGCCATCAAGCTCCAGGCTCAAGTCCAGGAGTTTGA...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCCGCATCAGTACAGCCTaGGAGTGTCACATCATTGGG +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCRISTA*ECHIIG
Trigger: CCCAATGATGTGACACTCTCAGGCTGTACTGATGCG...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGAGGAGCCTGCAGGGCTaGCACAAGAGATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELARSLQG*HKRCQE
Trigger: TTCCTGGCATCTCTTGTGTCAGCCCTGCAGGCTCCT...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCCTTTGGGATCCAGTCTaGAATCAGCTGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSLWDPV*NQLPIL
Trigger: CAGAATGGGCAGCTGATTTCAGACTGGATCCCAAAG...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCATCAAACCACTCCGTGTaGCTTCTAGGGCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPSNHSV*LLGQSR
Trigger: CCTTGACTGCCCTAGAAGTCACACGGAGTGGTTTGA...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CCCTCATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCACTTCGGAAGGTGCCTaGGGCATCAGCGTCACATGT +
Preference number: 4 (lower is better)
Translates to: PSCPRSSVPQGKSSALCGTSEGA*GISVTC
Trigger: ACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGT...GCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACATGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAACACAGCAGTAGGGGATaGGGAAACTGCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKHSSRG*GNCQRQ
Trigger: CTGTCTCTGGCAGTTTCCTCATCCCCTACTGCTGTG...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GGAAGGCAACACAGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCTCAGGCAGCAGCCAGTaGTTTGGTACTGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GRQHSSGTWGRCAGRPAASGSSQ*FGTGEP
Trigger: AGGCTCACCAGTACCAAATCACTGGCTGCTGCCTGA...GGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCAGCCCCCTGGGAACCTaGAGAGATTTTGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPSPLGT*RDFVDP
Trigger: AGGATCTACAAAATCTCTTCAGGTTCCCAGGGGGCT...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACAGCCCCCTGGGAACCTaGAGAGATTTTGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHSPLGT*RDFVDP
Trigger: AGGATCTACAAAATCTCTTCAGGTTCCCAGGGGGCT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGCACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTGCCTCCATCAGTGCTaGAACTACAGCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSCLHQC*NYSSSQ
Trigger: CTGTGAGCTGCTGTAGTTTCAGCACTGATGGAGGCA...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCCTAATGGGTCCTGAGTaGGCAGGGATGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTLMGPE*AGMLVS
Trigger: GCTGACCAGCATCCCTGCTCACTCAGGACCCATTAG...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCGCCAAGATGAGAAAGTaGCCATCAGGAGCCCAATCC +
Preference number: 4 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSAKMRK*PSGAQS
Trigger: GGATTGGGCTCCTGATGGTCACTTTCTCATCTTGGC...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACCTGCTTTGGCCAAGATaGGAAAGTGACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHLLWPR*ESDHQE
Trigger: CTCCTGATGGTCACTTTCTCATCTTGGCCAAAGCAG...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGTGTCTCTTGGCCCGGTaGTTCCGAGGGTTGTACTTA +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVCLLAR*FRGLYL
Trigger: TAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACA...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTAGCAGGGGCAGGCTGTaGTTCACAGAGAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATASRGRL*FTERFT
Trigger: TGTGAACCTCTCTGTGAAGCACAGCCTGCCCCTGCT...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGACCCAATCAACAGCAGTaGATAGTTCAGCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRPNQQQ*IVQRGP
Trigger: GGGCCCCCGCTGAACTATGCACTGCTGTTGATTGGG...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGAGATGGGAGGCCCCATaGTCTGCAATGAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQRWEAP*SAMNFS
Trigger: ACTGAAGTTCATTGCAGAGCATGGGGCCTCCCATCT...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp AGGTGTGTGCCGAGGACCAGATCAGAGCACCAATGTGGCCTGGAGCCTGTGCTGATGCTGCGCCATCCTTaGTGGGAAACAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RCVPRTRSEHQCGLEPVLMLRHP*WETGAK
Trigger: CTTGGCTCCTGTTTCCCAGCAAGGATGGCGCAGCAT...CAGCACAGGCTCCAGGCCACATTGGTGCTCTGATCTGGTCCTCGGCACACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAAAGGTCCCGCTCCCCATaGATGTCTCGGAAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKRSRSP*MSRKVD
Trigger: ATCCACTTTCCGAGACATGCATGGGGAGCGGGACCT...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGTCTCTCAGACACCTaGTCATACAGCGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSSLSDT*SYSVKS
Trigger: GCTCTTCACGCTGTATGAGCAGGTGTCTGAGAGACT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGAGTGTGCTCAGGATGTaGTGCAGCAGCAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPSVLRM*CSSRGT
Trigger: TGTCCCCCTGCTGCTGCAGCACATCCTGAGCACACT...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGGCAACTTCGGAAGGTaGCTGAGGCATCAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: DAGQLHALMVPHFQGPIPGNFGR*LRHQRH
Trigger: GTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCC...CGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCTGAGGATTGAAGCCTaGTGCCTCAGGAAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRLRIEA*CLRKVR
Trigger: TCGCACCTTCCTGAGGCAGCAGGCTTCAATCCTCAG...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCTACCCGACAACCATGCTaGAGGTCCCAGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASGRCETLQRQPRGAFVPTRQPC*RSQSSR
Trigger: CCTGGAGCTCTGGGACCTGCAGCATGGTTGTCGGGT...AGGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGAGCACCCGACAACCATaGTGCAGGTCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGSTRQP*CRSQSS
Trigger: GGAGCTCTGGGACCTGCAGCATGGTTGTCGGGTGCT...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGACCACACCTGAACCTTaGCATCCTCTCCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRTTPEP*HPLQPS
Trigger: TGACGGCTGGAGAGGATGGCAAGGTTCAGGTGTGGT...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GCCATAACCGTGTGGCCCCATCTAGCCCGACGGTTACCACCAGAAGCTCTGACCACCACACCTGAACCTTaGCATCCTCTCCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: AITVWPHLARRLPPEALTTTPEP*HPLQPS
Trigger: TGACGGCTGGAGAGGATGGCAAGGTTCAGGTGTGGT...GGTCAGAGCTTCTGGTGGTAACCGTCGGGCTAGATGGGGCCACACGGTTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGTCCCAGAGCCCCACAGAGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTGAAAGGGAACCCAGGTaGCCACGGGGCCGACCCAGA +
Preference number: 4 (lower is better)
Translates to: GPRAPQSHHWSRISVGYLEREPR*PRGRPR
Trigger: TCTGGGTCGGCCCCGTGGGCACCTGGGTTCCCTTTC...AAGATAACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGGGGCTCTGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp ATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTTTGAGTGCCCAGCCCTaGAAGGACCCATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: MSPQLSATGKVFCLVWPRLSAQP*KDPSSA
Trigger: TGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAA...ACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGGAGCATTCCTTGAGTaGCCAGCCCTGCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTGAFLE*PALQGP
Trigger: GGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCC...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGCATAGAGGGCATGGGCCTCCAAGAGCCGAGAGACCAGACCCAATTCCAAGTGGGAGCATTCCTTGAGTaGCCAGCCCTGCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: SIEGMGLQEPRDQTQFQVGAFLE*PALQGP
Trigger: GGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCC...CACTTGGAATTGGGTCTGGTCTCTCGGCTCTTGGAGGCCCATGCCCTCTATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCACAGGGAAAGTCTTCTaGCTTGTGTGGCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSTGKVF*LVWPRQ
Trigger: CTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGT...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCAACAGGGAAAGTCTTCTaGCTTGTGTGGCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: ESLLPCVAASAAALATAATGKVF*LVWPRQ
Trigger: CTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGT...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGCTCACAGACACCACGTaGTCCTCCACAGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: DAGQLHALMVPHFQGPIPLTDTT*SSTAAT
Trigger: TGTGGCAGCTGTGGAGGAGCACGTGGTGTCTGTGAG...CGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGCACACCAAGAGTGGATaGCATAACCGTGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VLLHSCHSAHSTLMTQELHTKSG*HNRVAP
Trigger: TGGGGCCACACGGTTATGGCATCCACTCTTGGTGTG...CAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCCACGGACTGTGTCACACCAAGAGTGGATaGCATAACCGTGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSGTWGRCAGRPAAHGLCHTKSG*HNRVAP
Trigger: TGGGGCCACACGGTTATGGCATCCACTCTTGGTGTG...ACACAGTCCGTGGGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCGCTGCAGGACAAATATaGCATACTCCTTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSAAGQI*HTPCGW
Trigger: CCACCCACAAGGAGTATGGCATATTTGTCCTGCAGC...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCAAACAGGCCCAGCAGCTaGATACTGGGTCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: ESLLPCVAASAAALATAANRPSS*ILGLSH
Trigger: ATGGGAGAGACCCAGTATGCAGCTGCTGGGCCTGTT...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACTCTCCCACGGCAAGCTaGAGGGTGGAGTTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYSPTAS*RVELAP
Trigger: GGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGA...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAGCTGGGACTACAGGTaGCCGCCGCCACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILSWDYR*PPPHLA
Trigger: AGCCAGGTGTGGCGGCGGGCACCTGTAGTCCCAGCT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GGTCCAGGCACAGCCAGTGACCCAGTCACGGTGACAGGCAGGGAAGGAGTGGATCCTGAGCTGTCTCTGTaGCAGAGATGGATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GPGTASDPVTVTGREGVDPELSL*QRWISG
Trigger: CCCTGAAATCCATCTCTGCCACAGAGACAGCTCAGG...ATCCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCACTGGCTGTGCCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGGCCCAGTGGAAGTGTaGATGGTCAGGAAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCGPVEV*MVRKVV
Trigger: TACAACCTTCCTGACCATCCACACTTCCACTGGGCC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGATTTCCAGGCATCTaGCACAGAGCTGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSRFPGI*HRAEEA
Trigger: AGCTTCCTCAGCTCTGTGCCAGATGCCTGGAAATCT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACGCAGCAGGGGGACAGTaGCAGGCAGGGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNAAGGQ*QAGSGV
Trigger: GACTCCGGACCCTGCCTGCCACTGTCCCCCTGCTGC...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp ATCTGCTTCCTTAGGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTAGGGCAGTCAAGGCCTaGGGAAGGACATCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: ICFLRNLPEPYRTILRGGRAVKA*GRTSGP
Trigger: CGGGCCTGATGTCCTTCCCCAGGCCTTGACTGCCCT...ACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGGTTGGCTGCCTGCTaGGGCAGGAGCCGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SHHWSRISVGYLWSRHSQWLAAC*GRSRGY
Trigger: GTACCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCA...CTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GCCATAACCGTGTGGCCCCATCTAGCCCGACGGTTACCACCAGAAGCTCTGACCAGTGAGCAGGGATGCTaGTCAGCTCCACGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: AITVWPHLARRLPPEALTSEQGC*SAPRLD
Trigger: ATCAAGGCGTGGAGCTGACCAGCATCCCTGCTCACT...GGTCAGAGCTTCTGGTGGTAACCGTCGGGCTAGATGGGGCCACACGGTTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGAAGGCAACACAGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCAGGAGGGTGTGGGTTTaGCACACCAAGAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: GRQHSSGTWGRCAGRPAARRVWV*HTKSGC
Trigger: GCATCCACTCTTGGTGTGCCAAACCCACACCCTCCT...GGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCCTCATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCTGCCATGGAACCATCTaGTGCCCAAGCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: PSCPRSSVPQGKSSALCGCHGTI*CPSHSS
Trigger: ACTGCTGTGGCTTGGGCACCAGATGGTTCCATGGCA...GCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACATGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCCTCATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCATCAGAGCACCAATGTaGCCTGGAGCCTGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PSCPRSSVPQGKSSALCGIRAPM*PGACAV
Trigger: CACAGCACAGGCTCCAGGCCACATTGGTGCTCTGAT...GCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACATGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCTCTCATTCCTCCTCCTaGCAAGAATGGCATCCTAGG +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSSHSSS*QEWHPR
Trigger: CCTAGGATGCCATTCTTGCCAGGAGGAGGAATGAGA...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp CCATTGGCAGTGCCCACAGCTGCTCTTTGCCCATTGGTGGAGAAGGCCACAGCATGGATGTGCAGTCGCTaGACCAGCTTCTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PLAVPTAALCPLVEKATAWMCSR*TSFFRV
Trigger: CACCCTGAAGAAGCTGGTTCAGCGACTGCACATCCA...TGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCCAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp ATCTGCTTCCTTAGGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTCATGGTGGCGGGAACTaGTTCCAACCCGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ICFLRNLPEPYRTILRGGHGGGN*FQPAAG
Trigger: ACCTGCTGCGGGTTGGAATCAGTTCCCGCCACCATG...ACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGCAACAATTTGGCCAAGGAGGATaGCCCTGTCCACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: LQPSVTGNPHAGKAQQQQFGQGG*PCPQEP
Trigger: GGGTTCCTGTGGACAGGGTCATCCTCCTTGGCCAAA...TTGTTGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TGCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCGTAGCTCTTCAGTTCTaGGATCCGACGTGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: CLRKVRNTATSASGSFCSVALQF*DPTCGL
Trigger: GAGGCCGCACGTCGGATCTCAGAACTGAAGAGCTAC...GGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTCTTTGGGATCCAGTCTaGAATCAGCTGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: KHTVASSRQSGLRQQPVILWDPV*NQLPIL
Trigger: CAGAATGGGCAGCTGATTTCAGACTGGATCCCAAAG...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCAAACCACTCCGTGTaGCTTCTAGGGCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKSNHSV*LLGQSR
Trigger: CCTTGACTGCCCTAGAAGTCACACGGAGTGGTTTGA...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGACCCAGTCAGCCGGGGGTACTGGCTaGGGATTGAAGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EQDISRLSLVQAQPVTQSAGGTG*GLKPAA
Trigger: GGCAGCAGGCTTCAATCCTCAGCCAGTACCCCCGGC...TGACTGGGTCACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGTGATTTGGTACTGGTaGGCCTTAGTCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATAVIWYW*ALVCST
Trigger: GGTGCTGCAGACTAAGGCTCACCAGTACCAAATCAC...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGTCAGGCAGCAGCCAGTaGTTTGGTACTGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELASGSSQ*FGTGEP
Trigger: AGGCTCACCAGTACCAAATCACTGGCTGCTGCCTGA...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTGGTATACATGTGTCAGATCACCATCTGGGCTaGGTGCCACAGAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GAQATAVTAAELLGIHVSDHHLG*VPQRGQ
Trigger: CTGCCCTCTCTGTGGCACTCAGCCCAGATGGTGATC...TGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCCACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp AGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGCACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SCHSAHSTLMTQELTKPLHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...CAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAACACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGCCACAGCTGCACTGTaGAATCCTCTGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAATAAL*NPLRQK
Trigger: CTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp ATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTTGCCTCCATCAGTGCTaGAACTACAGCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: MSPQLSATGKVFCLVWPRCLHQC*NYSSSQ
Trigger: CTGTGAGCTGCTGTAGTTTCAGCACTGATGGAGGCA...ACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGTGCCTCCATCAGTGCTaGAACTACAGCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PQRSQHSDDPGTDQAAVLCLHQC*NYSSSQ
Trigger: CTGTGAGCTGCTGTAGTTTCAGCACTGATGGAGGCA...CAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCATGCCTCCATCAGTGCTaGAACTACAGCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: ESLLPCVAASAAALATAACLHQC*NYSSSQ
Trigger: CTGTGAGCTGCTGTAGTTTCAGCACTGATGGAGGCA...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGTGACCCAGTCACGGTaGCAGGCAGGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILVTQSR*QAGKEW
Trigger: CCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCAC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGGTGGCTAATGGGTCCTaGGTGAGCAGGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGVANGS*VSRDAG
Trigger: ACCAGCATCCCTGCTCACTCAGGACCCATTAGCCAC...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCGCCAAGATGAGAAAGTaGCCATCAGGAGCCCAATCC +
Preference number: 4 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSAKMRK*PSGAQS
Trigger: GGATTGGGCTCCTGATGGTCACTTTCTCATCTTGGC...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGCCAACGACCCAAAGTTaGTTCCTGAGCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVPTTQS*FLSCLC
Trigger: ACAGAGACAGCTCAGGAAGCAACTTTGGGTCGTTGG...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCCCGGTGCCTGGCATACAAAGATaGCTTGAGGATAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: VLGVLTSQQRRLRSRPPVPGIQR*LEDKLR
Trigger: CCTGAGTTTATCCTCAAGGCATCTTTGTATGCCAGG...CACCGGGGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGTTCCGGACGTTCAGCTaGTGCCTGGCATACAAAGAT +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVFRTFS*CLAYKD
Trigger: ATCTTTGTATGCCAGGCAGCAGCTGAACGTCCGGAA...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp AGCATAGAGGGCATGGGCCTCCAAGAGCCGAGAGACCAGACCCAATTCCAAGTGCAACCCGCAGCAGGTTaGACAGGTTCCGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: SIEGMGLQEPRDQTQFQVQPAAG*TGSEAW
Trigger: CCATGCTTCGGAACCTGTGCAACCTGCTGCGGGTTG...CACTTGGAATTGGGTCTGGTCTCTCGGCTCTTGGAGGCCCATGCCCTCTATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACACACAGGTATCCTCATTaGCATCCGAAGCTGCTGACG +
Preference number: 4 (lower is better)
Translates to: HRESLLPCVAASAAALATHRYPH*HPKLLT
Trigger: CGTCAGCAGCTTCGGATGGCAATGAGGATACCTGTG...TGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGGGGCCCTTGTGGGTTaGTCTTTGGACAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTGALVG*SLDRAC
Trigger: ACAGGCTCTGTCCAAAGAGCAACCCACAAGGGCCCC...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CCGGGTGCCGAACCCTTCCGCAGTTTCACTTGCCACTCGCTGATTTTCTCATCACGCCCTGAAGGGTACTaGTGGGCCCAGTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: PGAEPFRSFTCHSLIFSSRPEGY*WAQWKC
Trigger: ACACTTCCACTGGGCCCAGCAGTACCCTTCAGGGCG...TGATGAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAGGGTTCGGCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCCCAGGAAGGCTGTCTTaGCCTGTCCTGACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCPGRLS*PVLTAP
Trigger: CGGGGCAGTCAGGACAGGGCAAGACAGCCTTCCTGG...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACCAGTCTGAAATCAGCTaGCCATTCTGGTCCACTAAC +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHQSEIS*PFWSTN
Trigger: GTTAGTGGACCAGAATGGGCAGCTGATTTCAGACTG...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GGAGCTTTTGTTCCTCTTTGGGGACTGAAGAAGCATAGAGGGCATGGGCCTCCATGGGCACCCTGGCTCTaGTCAAGGGTCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: GAFVPLWGLKKHRGHGPPWAPWL*SRVSPR
Trigger: CCTAGGGGAGACCCTTGAGCAGAGCCAGGGTGCCCA...TGGAGGCCCATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGGCTCCTTCTCCAGTGTaGTCAGGATGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LHSCHSAHSTLMTQELTKAPSPV*SGCAAA
Trigger: TGCTGCAGCACATCCTGAGCACACTGGAGAAGGAGC...CTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGTTACCAGCAGCCACTaGTTCTTCCCAGCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: VFCLVWPRQQLPWPQLHCVTSSH*FFPALS
Trigger: ACTAAGAGCTGGGAAGAAGCAGTGGCTGCTGGTAAC...ACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GCCATAACCGTGTGGCCCCATCTAGCCCGACGGTTACCACCAGAAGCTCTGACCAGGATTGAAGCCTGCTaGCTCAGGAAGGTGCGAAAC +
Preference number: 4 (lower is better)
Translates to: AITVWPHLARRLPPEALTRIEAC*LRKVRN
Trigger: GTTTCGCACCTTCCTGAGGCAGCAGGCTTCAATCCT...GGTCAGAGCTTCTGGTGGTAACCGTCGGGCTAGATGGGGCCACACGGTTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAACAGGGGCTGGTTGGCTaGCTGCTGGGGCAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKQGLVG*LLGQEP
Trigger: CGGCTCCTGCCCCAGCAGGCAGCCAACCAGCCCCTG...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CCGGGTGCCGAACCCTTCCGCAGTTTCACTTGCCACTCGCTGATTTTCTCATCAAGCACCCGACAACCATaGTGCAGGTCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGAEPFRSFTCHSLIFSSSTRQP*CRSQSS
Trigger: GGAGCTCTGGGACCTGCAGCATGGTTGTCGGGTGCT...TGATGAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAGGGTTCGGCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGGAGCCAGACCACACCTGAACCTTaGCATCCTCTCCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SWEVASPSTGFWNLDRSQTTPEP*HPLQPS
Trigger: TGACGGCTGGAGAGGATGGCAAGGTTCAGGTGTGGT...CTGGCTCCTGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACAGGGAAAGTCTTCTaGCTTGTGTGGCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTTGKVF*LVWPRQ
Trigger: CTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGT...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGTCCCCGCAGCTCAGTaGCACAGGGAAAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTVPAAQ*HRESLL
Trigger: CAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCTTCCTTAGGAACCTaGCAGAGCCGTACAGAACCA +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATAASLGT*QSRTEP
Trigger: TGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGC...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCGTGGCCTGGAGCCTGTaGTGTGGCCACAGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCVAWSL*CGHSLS
Trigger: GCTAAGGCTGTGGCCACAGCACAGGCTCCAGGCCAC...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAACTCAAATTTCCGGGTaGCGAACCCTTCCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEATQISG*RTLPQF
Trigger: AAACTGCGGAAGGGTTCGGCACCCGGAAATTTGAGT...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTTGGCTCACTATCCATaGTGGCATCACTATCCATGC +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHLAHYP*WHHYPC
Trigger: GCATGGATAGTGATGCCAGCATGGATAGTGAGCCAA...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGAACAGGCCCAGCAGCTaGATACTGGGTCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELANRPSS*ILGLSH
Trigger: ATGGGAGAGACCCAGTATGCAGCTGCTGGGCCTGTT...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGAAGTACACATTGCCCTaGACGTCTCCCACGGCAAGC +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAKYTLP*TSPTAS
Trigger: GCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACAGTGTCTTCAGGCTTTaGATCTCTAGCACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHSVFRL*ISSTRG
Trigger: ACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCTCTGGAACAAGGGGCTaGCAGACACAGTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCSGTRG*QTQCSL
Trigger: TAAAGAGCACTGTGTCTGCCAGCCCCTTGTTCCAGA...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAAGGCAGCTGGACAATaGCACAGAAATATCGTCGCA +
Preference number: 4 (lower is better)
Translates to: PRSSVPQGKSSALCGRVSKAAGQ*HRNIVA
Trigger: TGCGACGATATTTCTGTGCCATTGTCCAGCTGCCTT...GCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCCCCTGGAGAGCGGGGTaGCCGGCGGGGGTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCPWRAG*PAGVSL
Trigger: AAGAGACACCCCCGCCGGCCACCCCGCTCTCCAGGG...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp ATGTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTGCATGCTGGAGTCTCTaGAGAATGAGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: MSPQLSATGKVFCLVWPRACWSL*RMSSWW
Trigger: CCACCATGAGCTCATTCTCCAGAGACTCCAGCATGC...ACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAACCGACTTCGCATGCTaGAGTCTCTGGAGAATGAGC +
Preference number: 4 (lower is better)
Translates to: HRESLLPCVAASAAALATTDFAC*SLWRMS
Trigger: GCTCATTCTCCAGAGACTCCAGCATGCGAAGTCGGT...TGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GCCGTGCCCCTTCTCGCCAGGCCCACAGCTCCACCATACTGTCCAGCCGGCCCAGCCAGTAAAGCTGTTTaGCCACATTTATCATTCCAT +
Preference number: 4 (lower is better)
Translates to: AVPLLARPTAPPYCPAGPASKAV*PHLSFH
Trigger: ATGGAATGATAAATGTGGCCAAACAGCTTTACTGGC...TGGGCCGGCTGGACAGTATGGTGGAGCTGTGGGCCTGGCGAGAAGGGGCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGCAACAAAGAGGCACTTaGAATTCACACGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQQQRGT*NSHAAS
Trigger: ACTGGCAGCGTGTGAATTCCAAGTGCCTCTTTGTTG...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCACATGTTCCAGAAGATaGGAGGCCCCATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSTCSRR*EAPCSA
Trigger: TGCAGAGCATGGGGCCTCCCATCTTCTGGAACATGT...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGACCCCTGTCTTTCCTaGGGGTGGTGGAATCTTGAA +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATADPCLS*GWWNLE
Trigger: TTCAAGATTCCACCACCCCCAGGAAAGACAGGGGTC...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGAGGAGCCAAGGGGCTTaGAGTGTCCTCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGRSQGA*SVLFQW
Trigger: CCACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCT...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATCGGGCCTGCAGTGCTaGCAGCACAGACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILSGLQC*QHRPQQ
Trigger: CTGCTGAGGTCTGTGCTGCCAGCACTGCAGGCCCGA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCCAGGAAGGTTGTAGCTaGGGGGAATGTATCCATAAC +
Preference number: 4 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPQEGCS*GECIHN
Trigger: GTTATGGATACATTCCCCCCAGCTACAACCTTCCTG...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGAGTCATCGTCTGGGATaGACACTGGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELASHRLG*TLAAPA
Trigger: TGCTGGAGCAGCCAGTGTCCATCCCAGACGATGACT...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCCCGGGCAGGACTCGGTaGCTTCTGCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCPGRTR*LLQLLE
Trigger: TTCCAGCAGCTGCAGAAGCCACCGAGTCCTGCCCGG...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACATCGATGATCAGGACCTaGGTCTGGCCAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTSMIRT*VWPGCR
Trigger: CCTGCATCCTGGCCAGACCCAGGTCCTGATCATCGA...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GGTCCAGGCACAGCCAGTGACCCAGTCACGGTGACAGGCAGGGAAGGAGTGGATATCAGCTGCCCATTCTaGTCCACTAACCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: GPGTASDPVTVTGREGVDISCPF*STNLSA
Trigger: GGCTGATAGGTTAGTGGACCAGAATGGGCAGCTGAT...ATCCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCACTGGCTGTGCCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACTCCCAAGCACACGGTaGCTAGCAGCCGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILLPSTR*LAAGSL
Trigger: CAGACTGCCGGCTGCTAGCCACCGTGTGCTTGGGAG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTATTACCTGCCCCTCTaGGTGGAAGGCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSYYLPL*VEGNTV
Trigger: AACTGTGTTGCCTTCCACCCAGAGGGGCAGGTAATA...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGTTGAGCCCATCCACCTaGAAGAAGCTGATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRLSPST*KKLMLP
Trigger: TGGCAGCATCAGCTTCTTCCAGGTGGATGGGCTCAA...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCACCACAGAGCCATCACTaGAGCAGGATATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEAPQSHH*SRISVG
Trigger: ACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGG...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAGTGAGCAGGGATGCTaGTCAGCTCCACGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: EHSLSAQPCKDPSSAPLTSEQGC*SAPRLD
Trigger: ATCAAGGCGTGGAGCTGACCAGCATCCCTGCTCACT...GGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGAGCAGCAGCACGGACTaGGCCGCTGTGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVSSSTD*AAVSQE
Trigger: CTCCTGGGACACAGCGGCCCAGTCCGTGCTGCTGCT...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGCTCCAGATTTCAGATaGAGCATCCCCTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCAPDFR*SIPWLH
Trigger: ATGAAGCCAGGGGATGCTCCATCTGAAATCTGGAGC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACGGATCCCATCAGAGCTaGCACACAAAAATGAGGACT +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHGSHQS*HTKMRT
Trigger: AGTCCTCATTTTTGTGTGCCAGCTCTGATGGGATCC...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GGAAGGCAACACAGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCCTTCTGGGCTGCATTTaGCCAGGTTCCATAGGATCC +
Preference number: 4 (lower is better)
Translates to: GRQHSSGTWGRCAGRPAALLGCI*PGSIGS
Trigger: GGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAG...GGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGGTCCATTCTCCTTCTaGGCTGCATTTGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: HRESLLPCVAASAAALATGPFSF*AAFGQV
Trigger: AACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACC...TGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCAGATGGGTCTGTCCCTaGAGTTTGGGTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSRWVCP*SLGFWS
Trigger: ACTCCAGAAACCCAAACTCCAGGGACAGACCCATCT...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGTTCCCTGCAGGTAGATaGGTCTGTCCCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRFPAGR*VCPWSL
Trigger: CAAACTCCAGGGACAGACCCATCTACCTGCAGGGAA...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GGAAGGCAACACAGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCTTCCCTGCAGGTAGATaGGTCTGTCCCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GRQHSSGTWGRCAGRPAAFPAGR*VCPWSL
Trigger: CAAACTCCAGGGACAGACCCATCTACCTGCAGGGAA...GGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGTCCTCCTGGCAAGAATaGCATCCTAGGGTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELASSWQE*HPRVLG
Trigger: CCCTAGGACCCTAGGATGCCATTCTTGCCAGGAGGA...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp GAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGACCCAGTCAGGAGCCAGAGGGACTTaGGGCTTAGCCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EQDISRLSLVQAQPVTQSGARGT*GLARPG
Trigger: CCCTGGCCTGGCTAAGCCCCAAGTCCCTCTGGCTCC...TGACTGGGTCACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471684.2
3UTR CAA 72 bp GTCCCATTGGCAGTGCCCACAGCTGCTCTTTGCCCATaGGTGGAGAAGGCCACAGCAGTAGGGGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: VPLAVPTAALCP*VEKATAVGDEE
Trigger: TTCCTCATCCCCTACTGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCCAATGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GGAAGGCAACACAGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCGCAATGCTTGATTTCTaGGTTGAGCCTCGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GRQHSSGTWGRCAGRPAAAMLDF*VEPRGH
Trigger: ATGCCCTCGAGGCTCAACTCAGAAATCAAGCATTGC...GGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCTCAAACTCCTGGACTTaGGCCTGGAGCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTSNSWT*AWSLMA
Trigger: TGCCATCAAGCTCCAGGCTCAAGTCCAGGAGTTTGA...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CCATCCGCTCGATATCCAACAGCCACCCGATCACCATCTGGGCTGAGTGCCACAGGAAAGTGGATGAAATaGAAAGCCGGATGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PSARYPTATRSPSGLSATGKWMK*KAGCCA
Trigger: GGCGCAGCATCCGGCTTTTCATTTCATCCACTTTCC...TGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGGGTCTCCTCCTCAGTaGCGCCCCAGCGGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCGSPPQ*RPSGGR
Trigger: TCGACCTCCGCTGGGGCGTCACTGAGGAGGAGACCC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp GAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCGGTATCTGCGGCAGGTaGTCCCTTTCTGTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: EHSLSAQPCKDPSSAPLTGICGR*SLSVCL
Trigger: TAAGCAGACAGAAAGGGATCACCTGCCGCAGATACC...GGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGCTGGTTGTTAAATGGTaGCTCCTCCAGCCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGLVVKW*LLQPLP
Trigger: GGGAAGCGGCTGGAGGAGTCACCATTTAACAACCAG...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCGTGAAGAGCCTCAGGTaGTCGGTGACCAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCVKSLR*SVTKRR
Trigger: CCTGCGCTTGGTCACCGATCACCTGAGGCTCTTCAC...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp AGCATAGAGGGCATGGGCCTCCAAGAGCCGAGAGACCAGACCCAATTCCAAGTGACTTCGGAAGGTGCCTaGGGCATCAGCGTCACATGT +
Preference number: 4 (lower is better)
Translates to: SIEGMGLQEPRDQTQFQVTSEGA*GISVTC
Trigger: ACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGT...CACTTGGAATTGGGTCTGGTCTCTCGGCTCTTGGAGGCCCATGCCCTCTATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGTTCCTCTTTGGGGACTaGAGAAGCATAGAGGGCATG +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRFLFGD*RSIEGM
Trigger: CATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAA...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCTTGGTGGCAAAGAGGTaGGTCCAGGGGCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCLVAKR*VQGLVG
Trigger: GCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAA...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGAGGCTGGAGCTTTGCTaGTTTTTCATGGTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELARLELC*FFMVRG
Trigger: ACCCCGGACCATGAAAAATCAGCAAAGCTCCAGCCT...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCAGGCTGGAGCTTTGCTaGTTTTTCATGGTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTRLELC*FFMVRG
Trigger: ACCCCGGACCATGAAAAATCAGCAAAGCTCCAGCCT...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTAGCCCCCTGGGAACCTaGAGAGATTTTGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTSPLGT*RDFVDP
Trigger: AGGATCTACAAAATCTCTTCAGGTTCCCAGGGGGCT...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GTGAAGACTCAAATTTCCGGGTGCCGAACCCTTCCGCAGTTTCACTTGCCACTCGAAGGGAGCATTCCTTaGGTGCCCAGCCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: VKTQISGCRTLPQFHLPLEGSIP*VPSPAR
Trigger: CCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTC...GAGTGGCAAGTGAAACTGCGGAAGGGTTCGGCACCCGGAAATTTGAGTCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGGCCACAGCTGCACTGTaGAATCCTCTGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGATAAL*NPLRQK
Trigger: CTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGC...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGGTGACCCAGTCACGGTaGCAGGCAGGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQVTQSR*QAGKEW
Trigger: CCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCAC...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACCTAATGGGTCCTGAGTaGGCAGGGATGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYLMGPE*AGMLVS
Trigger: GCTGACCAGCATCCCTGCTCACTCAGGACCCATTAG...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCGCTGGCACACAAAAATaGGGACTCAGATTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSAGTQK*GLRFRF
Trigger: AAACCTGAATCTGAGTCCTCATTTTTGTGTGCCAGC...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCTAGGGCCCGCGAGTaGTGCAAGAATTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAPRARE*CKNSKT
Trigger: GGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGG...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGAAAGGGCTGTCTCTGTaGCAGAAACATAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQKGLSL*QKHSSF
Trigger: GAAAGAGCTATGTTTCTGTCACAGAGACAGCCCTTT...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCTCTCCTACAAGTCCTTaGATTCTTGGCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: CTSPTASCRVELAPSQGSSPTSP*ILGHRR
Trigger: TCTTCTGTGGCCAAGAATTCAAGGACTTGTAGGAGA...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR GCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGGAGGCCCCATGCTCTaGAATGAACTTCAGTATCGC +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAGGPML*NELQYR
Trigger: GCGATACTGAAGTTCATTGCAGAGCATGGGGCCTCC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGAGGAGGCCCCATGCTCTaGAATGAACTTCAGTATCGC +
Preference number: 4 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRGGPML*NELQYR
Trigger: GCGATACTGAAGTTCATTGCAGAGCATGGGGCCTCC...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCGCTTGGGCAGAGGGCTaGAGACGTTGGTTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCAWAEG*RRWFRF
Trigger: GAACCGGAACCAACGTCTGCAGCCCTCTGCCCAAGC...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGCTCAACACTCAGCACTCCGTaGAGCTGGTCCACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: WSAPRLDGPTLSRSHPGSTLSTP*SWSTVK
Trigger: TTTGACTGTGGACCAGCTGCACGGAGTGCTGAGTGT...TGAGCCGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGAGGATTGAAGCCTGCTaGCTCAGGAAGGTGCGAAAC +
Preference number: 4 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPRIEAC*LRKVRN
Trigger: GTTTCGCACCTTCCTGAGGCAGCAGGCTTCAATCCT...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTGGTATACATGTGTCAAGTGTGTGTTGGAGGTaGCATCTCCGGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GAQATAVTAAELLGIHVSSVCWR*HLRESS
Trigger: GCTGCTCTCCCGGAGATGGCACCTCCAACACACACT...TGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCTAACTGGCAACCCGCATaGAGGAAAAGCGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASGRCETLQRQPRGAFVPNWQPA*RKSAAA
Trigger: TGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTT...AGGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGTCCCAGAGCCCCACAGAGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTGTGCTCCTCCACAGCTaGCACAGCGCTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: GPRAPQSHHWSRISVGYLVLLHS*HSAHST
Trigger: AGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC...AAGATAACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGGGGCTCTGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGAGCTTTTGTTCCTCTTTGGGGACTGAAGAAGCATAGAGGGCATGGGCCTCCAGTGCTCCTCCACAGCTaGCACAGCGCTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: GAFVPLWGLKKHRGHGPPVLLHS*HSAHST
Trigger: AGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC...TGGAGGCCCATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGCACACCAAGAGTGGATaGCATAACCGTGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGHTKSG*HNRVAP
Trigger: TGGGGCCACACGGTTATGGCATCCACTCTTGGTGTG...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCTTGATTTCCAGATACTaGCATGGAACCATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPLISRY*HGTIWC
Trigger: GCACCAGATGGTTCCATGGCAGTATCTGGAAATCAA...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTACAGCCTTAGCTTCCTaGCACAAGATTAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KHTVASSRQSGLRQQPVITALAS*HKISSP
Trigger: TGGGGAACTAATCTTGTGGCAGGAAGCTAAGGCTGT...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTTTGGCTCACTATCCATaGTGGCATCACTATCCATGC +
Preference number: 4 (lower is better)
Translates to: KHTVASSRQSGLRQQPVILAHYP*WHHYPC
Trigger: GCATGGATAGTGATGCCAGCATGGATAGTGAGCCAA...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAACTTCCAGAGCTGAGCTaGGCAGACTCTGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: SGLHLARFHRIPSELAHKLPELS*ADSGRG
Trigger: GCCTCGTCCAGAGTCTGCGCAGCTCAGCTCTGGAAG...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATGGCAGCCAGGGTaGGGTCAGATGTATTGTTCA +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVKWQPG*GQMYCS
Trigger: TGAACAATACATCTGACCCCACCCTGGCTGCCATTT...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CATCCTCTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGCAAATTTGTCCGTCATaGCAGTACGGAGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: HPLQPSVTGNPHAGKAQQQICPS*QYGDRR
Trigger: CCGCCTGTCTCCGTACTGCCATGACGGACAAATTTG...CTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAGAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGGAAACTGCCGACTGTaGATCACCGACTTCGCATGC +
Preference number: 4 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTGNCRL*ITDFAC
Trigger: GCATGCGAAGTCGGTGATCCACAGTCGGCAGTTTCC...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp ATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTGTCACCAGCCAAGACAGTGCGGCCTaGCAGCAGGGGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ILGLSHSLTSLSFEAVTSQDSAA*QQGQAV
Trigger: CACAGCCTGCCCCTGCTGCCAGGCCGCACTGTCTTG...GCTGGTGACAGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACAGCGGGGGCCCTTGTaGGTTGCTCTTTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILQRGPL*VALWTE
Trigger: CTCTGTCCAAAGAGCAACCCACAAGGGCCCCCGCTG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGACCCCTGTCTTTCCTaGGGGTGGTGGAATCTTGAA +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELADPCLS*GWWNLE
Trigger: TTCAAGATTCCACCACCCCCAGGAAAGACAGGGGTC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAACTGCGCCATCCTTGCTaGGAAACAGGAGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: SGLHLARFHRIPSELAHKLRHPC*ETGAKG
Trigger: CCCCTTGGCTCCTGTTTCCCAGCAAGGATGGCGCAG...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TGCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCAGTCATCGTCTGGGATaGACACTGGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CLRKVRNTATSASGSFCSSHRLG*TLAAPA
Trigger: TGCTGGAGCAGCCAGTGTCCATCCCAGACGATGACT...GGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTGTCCTGAAGAAGGCGTaGCCGGGCAGGACTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAVLKKA*PGRTRW
Trigger: CCACCGAGTCCTGCCCGGCCACGCCTTCTTCAGGAC...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCCGAGCCCCAGAAAAGTaGAAGAAGACTAATGATGCC +
Preference number: 4 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSRAPEK*KKTNDA
Trigger: GGCATCATTAGTCTTCTTCCACTTTTCTGGGGCTCG...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGGGCTTCGGTAGGTGCTaGGGAGGGCACCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SHHWSRISVGYLWSRHSQGFGRC*GGHLAL
Trigger: AAGAGCCAGGTGCCCTCCCCAGCACCTACCGAAGCC...CTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp ATCTGCTTCCTTAGGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTATCAGGACCTGGGTCTaGCCAGGATGCAGGGACTCA +
Preference number: 4 (lower is better)
Translates to: ICFLRNLPEPYRTILRGGIRTWV*PGCRDS
Trigger: TGAGTCCCTGCATCCTGGCCAGACCCAGGTCCTGAT...ACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTCCCAAGGCCAGCACGTaGGCACCCTGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAPKAST*APWLCS
Trigger: TGAGCAGAGCCAGGGTGCCCACGTGCTGGCCTTGGG...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAGGCAAACGGGCCCATaGGGTAGGGGTCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILRQTGP*GRGLHC
Trigger: ACAGTGGAGACCCCTACCCCATGGGCCCGTTTGCCT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp ATGGAGGTTGGTAAGGAACTTCGAAAGAAGTCCACGGTTCCCGCTCTGGAGCAGAGGAGCCGGGGGTACTaGCTGAGGATTGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: MEVGKELRKKSTVPALEQRSRGY*LRIEAC
Trigger: GCAGGCTTCAATCCTCAGCCAGTACCCCCGGCTCCT...CTGCTCCAGAGCGGGAACCGTGGACTTCTTTCGAAGTTCCTTACCAACCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCTGGTTGGCTGCCTGCTaGGGCAGGAGCCGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPWLAAC*GRSRGY
Trigger: GTACCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCA...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCTGCCAGAGACAGGCTaGAGCTTTGCTGATTTTTCA +
Preference number: 4 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLLPETG*SFADFS
Trigger: TGAAAAATCAGCAAAGCTCCAGCCTGTCTCTGGCAG...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TGCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCCACAGTTCAGGGACTTaGGGTAGGTGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CLRKVRNTATSASGSFCSHSSGT*GRCAGR
Trigger: CCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTG...GGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGTATTACCTGCCCCTCTaGGTGGAAGGCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRYYLPL*VEGNTV
Trigger: AACTGTGTTGCCTTCCACCCAGAGGGGCAGGTAATA...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGTCTTCTGCCTTGTGTaGCCGCGTCAGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILVFCLV*PRQQLP
Trigger: AGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AGGTGTGTGCCGAGGACCAGATCAGAGCACCAATGTGGCCTGGAGCCTGTGCTGCCACAGAGCCATCACTaGAGCAGGATATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: RCVPRTRSEHQCGLEPVLPQSHH*SRISVG
Trigger: ACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGG...CAGCACAGGCTCCAGGCCACATTGGTGCTCTGATCTGGTCCTCGGCACACACCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GAAGCCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGTGTCCCAGGAGGGTGTaGGTTTGGCACACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: EAKSSWEVASPSTGFWNLCPRRV*VWHTKS
Trigger: ACTCTTGGTGTGCCAAACCCACACCCTCCTGGGACA...CAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGCAACAATGCCATGGAACCATCTaGTGCCCAAGCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: LQPSVTGNPHAGKAQQQQCHGTI*CPSHSS
Trigger: ACTGCTGTGGCTTGGGCACCAGATGGTTCCATGGCA...TTGTTGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAACAGAGTCTCCAGAGGTaGGCTTCACGGCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SGLHLARFHRIPSELAHKQSLQR*ASRPDP
Trigger: AGGATCTGGCCGTGAAGCTCACCTCTGGAGACTCTG...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTGGTATACATGTGTCACCTGCTCCGCCCTCGTaGTCATCATCCCAATCAACA +
Preference number: 4 (lower is better)
Translates to: GAQATAVTAAELLGIHVSPAPPS*SSSQST
Trigger: TGTTGATTGGGATGATGATCACGAGGGCGGAGCAGG...TGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATTTGGCCAAGGAGGATaGCCCTGTCCACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILFGQGG*PCPQEP
Trigger: GGGTTCCTGTGGACAGGGTCATCCTCCTTGGCCAAA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGGGAAAGTGGATGAAATaGAAAGCCGGATGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGGKWMK*KAGCCA
Trigger: GGCGCAGCATCCGGCTTTTCATTTCATCCACTTTCC...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACATCTGGCACAGAGCTaGGGAAGCTGGAATCCCGGA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILHLAQS*GSWNPG
Trigger: TCCGGGATTCCAGCTTCCTCAGCTCTGTGCCAGATG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCCATCTGGCACAGAGCTaGGGAAGCTGGAATCCCGGA +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCHLAQS*GSWNPG
Trigger: TCCGGGATTCCAGCTTCCTCAGCTCTGTGCCAGATG...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GGTCCCAGAGCCCCACAGAGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTAGGAGCCTGCAGGGCTaGCACAAGAGATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GPRAPQSHHWSRISVGYLRSLQG*HKRCQE
Trigger: TTCCTGGCATCTCTTGTGTCAGCCCTGCAGGCTCCT...AAGATAACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGGGGCTCTGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GGTCCCAGAGCCCCACAGAGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTATCAGCCCCATCGATaGTCAGGACCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GPRAPQSHHWSRISVGYLYQPHR*SGPGSG
Trigger: GCCAGACCCAGGTCCTGATCATCGATGGGGCTGATA...AAGATAACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGGGGCTCTGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCGTAGAGCGGCCGGCCTaGTTCCCGCTTCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPVERPA*FPLHQQ
Trigger: CTGCTGGTGAAGCGGGAATCAGGCCGGCCGCTCTAC...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGATTCCTCTTTGGGGACTaGAGAAGCATAGAGGGCATG +
Preference number: 4 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRFLFGD*RSIEGM
Trigger: CATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAA...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCGCCGGGGGTACTGGCTaGGGATTGAAGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPAGGTG*GLKPAA
Trigger: GGCAGCAGGCTTCAATCCTCAGCCAGTACCCCCGGC...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACCACAGCAGTAGGGGATaGGGAAACTGCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYHSSRG*GNCQRQ
Trigger: CTGTCTCTGGCAGTTTCCTCATCCCCTACTGCTGTG...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCGACCCTGACCACACCTaGACCTTGCCATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCDPDHT*TLPSSP
Trigger: TGGAGAGGATGGCAAGGTTCAGGTGTGGTCAGGGTC...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGAGCCCCCTGGGAACCTaGAGAGATTTTGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELASPLGT*RDFVDP
Trigger: AGGATCTACAAAATCTCTTCAGGTTCCCAGGGGGCT...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCCTAATGGGTCCTGAGTaGGCAGGGATGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCLMGPE*AGMLVS
Trigger: GCTGACCAGCATCCCTGCTCACTCAGGACCCATTAG...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CCATCCGCTCGATATCCAACAGCCACCCGATCACCATCTGGGCTGAGTGCCACACTGCTTTGGCCAAGATaGGAAAGTGACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSARYPTATRSPSGLSATLLWPR*ESDHQE
Trigger: CTCCTGATGGTCACTTTCTCATCTTGGCCAAAGCAG...TGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCTTCCAGGCAGCTCACTaGCCCTTCGCATCGGAACAG +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCFQAAH*PFASEQ
Trigger: CTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAA...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACAGAGAGCAGGCAATTaGTGTTGTTCACACGGTACA +
Preference number: 4 (lower is better)
Translates to: ESLLPCVAASAAALATAAQRAGN*CCSHGT
Trigger: TGTACCGTGTGAACAACAGCAATTGCCTGCTCTCTG...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCATTCTCCCTCTTGAGCTaGTCATACAACACAGGTATC +
Preference number: 4 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPFSLLS*SYNTGI
Trigger: GATACCTGTGTTGTATGAGCAGCTCAAGAGGGAGAA...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGAGCACGACGTCCACCTaGTCCGCCCTCGTGATCATC +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQSTTST*SALVII
Trigger: GATGATCACGAGGGCGGAGCAGGTGGACGTCGTGCT...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCGCTCGGGCCTGCAGTaGTGGCAGCACAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPRSGLQ*WQHRPQ
Trigger: CTGAGGTCTGTGCTGCCAGCACTGCAGGCCCGAGCG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCTTCCGGTTCAGGAACTaGATCACCTCCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: EHSLSAQPCKDPSSAPLTFRFRN*ITSISV
Trigger: GACAGAGATGGAGGTGATGCAGTTCCTGAACCGGAA...GGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGCAGTCTGAAATCAGCTaGCCATTCTGGTCCACTAAC +
Preference number: 4 (lower is better)
Translates to: VLLHSCHSAHSTLMTQELQSEIS*PFWSTN
Trigger: GTTAGTGGACCAGAATGGGCAGCTGATTTCAGACTG...CAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAGGACATCAGGCCCGTaGTCCTTCTCCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILRTSGP*SFSSVL
Trigger: GAGCACACTGGAGAAGGAGCACGGGCCTGATGTCCT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGCTTCCAGAGCTGAGCTaGAATGAGGATGTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGLPELS*NEDVCR
Trigger: ACGGCACACATCCTCATTGCAGCTCAGCTCTGGAAG...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGAAGGTGCGAAACACTaGAACGTCAGCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILEGAKH*NVSLGE
Trigger: CTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CCGGGTGCCGAACCCTTCCGCAGTTTCACTTGCCACTCGCTGATTTTCTCATCAGCTGCCTCAGGAAGGTaGGAAACACTGCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: PGAEPFRSFTCHSLIFSSAASGR*ETLQRQ
Trigger: CTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCAGC...TGATGAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAGGGTTCGGCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGGCTGGTTGGCTGCCTaGTGGGGCAGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLGWLAA*WGRSRG
Trigger: CCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCAGCC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCGGCAGTGCCCACAGCTaGTCTTTGCCCATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCGSAHS*SLPIGG
Trigger: TCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCC...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAACCTGTGGCTATTACCTaGCCCTCTGGGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SGLHLARFHRIPSELAHKPVAIT*PSGWKA
Trigger: TGCCTTCCACCCAGAGGGGCAGGTAATAGCCACAGG...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp ATGGAGGTTGGTAAGGAACTTCGAAAGAAGTCCACGGTTCCCGCTCTGGAGCAGCCTGTGGCTATTACCTaGCCCTCTGGGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: MEVGKELRKKSTVPALEQPVAIT*PSGWKA
Trigger: TGCCTTCCACCCAGAGGGGCAGGTAATAGCCACAGG...CTGCTCCAGAGCGGGAACCGTGGACTTCTTTCGAAGTTCCTTACCAACCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGGAAGGCAGCCAGCCGTaGCCCTTCTCGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKEGSQP*PFSPGP
Trigger: TGGGCCTGGCGAGAAGGGGCACGGCTGGCTGCCTTC...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGGCCAGGGCGGACACTaGCACATCCAGTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKGQGGH*HIQCLT
Trigger: GGTCAGGCACTGGATGTGGCAGTGTCCGCCCTGGCC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACTTGAGTGCCCAGCCCTaGAAGGACCCATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYLSAQP*KDPSSA
Trigger: TGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAA...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGTGACCATCAGGAGCCCAATCCAGACTTGTCAGCACCCCTAAGTCCTCCTGTAGTCCCCGCAGCTCAGTaGCACAGGGAAAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SDHQEPNPDLSAPLSPPVVPAAQ*HRESLL
Trigger: CAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC...TACAGGAGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACTCACAGACACCACGTaGTCCTCCACAGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILLTDTT*SSTAAT
Trigger: TGTGGCAGCTGTGGAGGAGCACGTGGTGTCTGTGAG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGACTCAAATTTCCGGGTaGCGAACCCTTCCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELATQISG*RTLPQF
Trigger: AAACTGCGGAAGGGTTCGGCACCCGGAAATTTGAGT...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACCATCCCCTGGCTTCATaGAAAGTAACTTCAAATCTG +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHHPLAS*KVTSNL
Trigger: CAGATTTGAAGTTACTTTGCATGAAGCCAGGGGATG...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CCATCCGCTCGATATCCAACAGCCACCCGATCACCATCTGGGCTGAGTGCCACAGCTGCAGGACAAATATaGCATACTCCTTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSARYPTATRSPSGLSATAAGQI*HTPCGW
Trigger: CCACCCACAAGGAGTATGGCATATTTGTCCTGCAGC...TGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAAGCTGGGACTACAGGTaGCCGCCGCCACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKSWDYR*PPPHLA
Trigger: AGCCAGGTGTGGCGGCGGGCACCTGTAGTCCCAGCT...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCTGGTACTCGTCAAACTaGGCAAATTTGTCCGTCATG +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCWYSSN*ANLSVM
Trigger: CATGACGGACAAATTTGCCCAGTTTGACGAGTACCA...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATTGTACTTAGCCAGCTaGTACTCGTCAAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKLYLAS*YSSNWA
Trigger: TGCCCAGTTTGACGAGTACCAGCTGGCTAAGTACAA...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATTGGAGGCTCCATCCCTaGAGAGCGGGGTGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHWRLHP*RAGWPA
Trigger: CGCCGGCCACCCCGCTCTCCAGGGATGGAGCCTCCA...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACAGTGTCCTCTTCCAGTaGCCGGAGAGACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNSVLFQ*PERLDP
Trigger: GGGGTCCAGTCTCTCCGGCCACTGGAAGAGGACACT...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GGAGCTTTTGTTCCTCTTTGGGGACTGAAGAAGCATAGAGGGCATGGGCCTCCAAGGAGCCAAGGGGCTTaGAGTGTCCTCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GAFVPLWGLKKHRGHGPPRSQGA*SVLFQW
Trigger: CCACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCT...TGGAGGCCCATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACCTGAAGGGTACTGCTaGGCCCAGTGGAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILPEGYC*AQWKCG
Trigger: TCCACACTTCCACTGGGCCCAGCAGTACCCTTCAGG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCAGATTTCCAGGCATCTaGCACAGAGCTGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GCWSAPRLDGPTLSRSHPRFPGI*HRAEEA
Trigger: AGCTTCCTCAGCTCTGTGCCAGATGCCTGGAAATCT...GGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGTCTGGGATGGACACTaGCTGCTCCAGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCVWDGH*LLQQGP
Trigger: GGGGCCCTGCTGGAGCAGCCAGTGTCCATCCCAGAC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCGTCCTGAAGAAGGCGTaGCCGGGCAGGACTCGGTGG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPVLKKA*PGRTRW
Trigger: CCACCGAGTCCTGCCCGGCCACGCCTTCTTCAGGAC...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGACCCAGTCAGTGAGGGCAAGACCCTaGTCAGGACGAGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: EQDISRLSLVQAQPVTQSVRARP*SGRAPE
Trigger: TTCTGGGGCTCGTCCTGACCAGGGTCTTGCCCTCAC...TGACTGGGTCACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACAGCACTCCGTGCAGCTaGTCCACAGTCAAACCACTC +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYSTPCS*STVKPL
Trigger: GAGTGGTTTGACTGTGGACCAGCTGCACGGAGTGCT...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCTGTGCAGCCACCACATaGAGGTTGGTAAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: EHSLSAQPCKDPSSAPLTCAATT*RLVRNF
Trigger: GAAGTTCCTTACCAACCTCCATGTGGTGGCTGCACA...GGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGATGTGCAGCCACCACATaGAGGTTGGTAAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRCAATT*RLVRNF
Trigger: GAAGTTCCTTACCAACCTCCATGTGGTGGCTGCACA...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GTGAAGACTCAAATTTCCGGGTGCCGAACCCTTCCGCAGTTTCACTTGCCACTCCACCCGATCACCATCTaGGCTGAGTGCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: VKTQISGCRTLPQFHLPLHPITI*AECHRE
Trigger: CTCTCTGTGGCACTCAGCCCAGATGGTGATCGGGTG...GAGTGGCAAGTGAAACTGCGGAAGGGTTCGGCACCCGGAAATTTGAGTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGATCCCGGCCCCCGGTaGCCAGGCTGCCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHDPGPR*PGCLHQ
Trigger: CTGATGGAGGCAGCCTGGCCACCGGGGGCCGGGATC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCACAGAGCCATCACTaGAGCAGGATATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAPQSHH*SRISVG
Trigger: ACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGG...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACTGTCCCAGGAGGGTGTaGGTTTGGCACACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYCPRRV*VWHTKS
Trigger: ACTCTTGGTGTGCCAAACCCACACCCTCCTGGGACA...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGACCCAGTCAAGCACCAATGTGGCCTaGAGCCTGTGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: EQDISRLSLVQAQPVTQSSTNVA*SLCCGH
Trigger: GTGGCCACAGCACAGGCTCCAGGCCACATTGGTGCT...TGACTGGGTCACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACAATAAAGTTCTTTTATaGGCCGGGCACAATGGCTCA +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHNKVLL*AGHNGS
Trigger: TGAGCCATTGTGCCCGGCCCATAAAAGAACTTTATT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACCCTTAGAGAAATGCTaGGCCCTCCAACTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILPLEKC*ALQLGG
Trigger: GCCTCCAAGTTGGAGGGCTCAGCATTTCTCTAAGGG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGCCCTTTCTTCTCTTCTaGATCAAACCAACGACCCAA +
Preference number: 4 (lower is better)
Translates to: SCHSAHSTLMTQELTKPLPFLLF*IKPTTQ
Trigger: TTGGGTCGTTGGTTTGATTCAGAAGAGAAGAAAGGG...CAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTTTCTCTGCTCTTCTCTaGGAAACCCTATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTFSALL*ETLCTL
Trigger: CAAGGTACATAGGGTTTCTCAGAGAAGAGCAGAGAA...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTCTGAGGCAGGGATTCAAATCTGTTaGCAGGTATTGTACCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRVSSCLGHSCTVKSSEAGIQIC*QVLYPS
Trigger: AGAAGGGTACAATACCTGTCAACAGATTTGAATCCC...TGCCTCAGAGGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGGGGGTGGTGGAATCTTaGATATTTTGTCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRGVVES*IFCPFG
Trigger: GCCAAATGGACAAAATATTCAAGATTCCACCACCCC...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGGTAGCTCTTCAGTTCTaGGATCCGACGTGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQVALQF*DPTCGL
Trigger: GAGGCCGCACGTCGGATCTCAGAACTGAAGAGCTAC...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAACTTCGGAAGGTGCCTaGGGCATCAGCGTCACATGT +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILTSEGA*GISVTC
Trigger: ACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp AGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGGACCCTGACCACACCTaGACCTTGCCATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SHHWSRISVGYLWSRHSQDPDHT*TLPSSP
Trigger: TGGAGAGGATGGCAAGGTTCAGGTGTGGTCAGGGTC...CTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCCCGACCCAGAGACCCTaGCCACACCTGAACCTTGCC +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCPTQRP*PHLNLA
Trigger: GGCAAGGTTCAGGTGTGGTCAGGGTCTCTGGGTCGG...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp GGTCCCAGAGCCCCACAGAGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTAGGAGCCAGAGGGACTaGAGGGAGCATTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GPRAPQSHHWSRISVGYLRSQRD*REHSLS
Trigger: ACTCAAGGAATGCTCCCTTCAGTCCCTCTGGCTCCT...AAGATAACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGGGGCTCTGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GAGTGTATCATCGGAGAGGAACAAACAAGCAGAGATTCCATCACAGCCACTCACGTGACCCAGTCACGGTaGCAGGCAGGGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ECIIGEEQTSRDSITATHVTQSR*QAGKEW
Trigger: CCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCAC...GTGAGTGGCTGTGATGGAATCTCTGCTTGTTTGTTCCTCTCCGATGATACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGTCAGCTCCACGCCTTaGTGGTCCCACACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILVSSTP*WSHTFK
Trigger: CTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGAC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp GGAGCTTTTGTTCCTCTTTGGGGACTGAAGAAGCATAGAGGGCATGGGCCTCCAGTCAGCTCCACGCCTTaGTGGTCCCACACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: GAFVPLWGLKKHRGHGPPVSSTP*WSHTFK
Trigger: CTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGAC...TGGAGGCCCATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CTGTCCTTCGAAGCTGTCACCAGCAACTCAGGTAGCACATGGAGGGCTGTGACAGCCAAGATGAGAAAGTaGCCATCAGGAGCCCAATCC +
Preference number: 4 (lower is better)
Translates to: LSFEAVTSNSGSTWRAVTAKMRK*PSGAQS
Trigger: GGATTGGGCTCCTGATGGTCACTTTCTCATCTTGGC...TGTCACAGCCCTCCATGTGCTACCTGAGTTGCTGGTGACAGCTTCGAAGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGCTGCTTTGGCCAAGATaGGAAAGTGACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGLLWPR*ESDHQE
Trigger: CTCCTGATGGTCACTTTCTCATCTTGGCCAAAGCAG...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACTTCCAGGCAGCTCACTaGCCCTTCGCATCGGAACAG +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNFQAAH*PFASEQ
Trigger: CTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAA...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAGCAGGGGCAGGCTGTaGTTCACAGAGAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILSRGRL*FTERFT
Trigger: TGTGAACCTCTCTGTGAAGCACAGCCTGCCCCTGCT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAGGAGCCAGTTCTGCCTTAAGCACTaGAGTCTTCAGAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: SWEVASPSTGFWNLDRSQFCLKH*SLQSVT
Trigger: GGTGACACTCTGAAGACTGCAGTGCTTAAGGCAGAA...CTGGCTCCTGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGAGATGGGAGGCCCCATaGTCTGCAATGAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGRWEAP*SAMNFS
Trigger: ACTGAAGTTCATTGCAGAGCATGGGGCCTCCCATCT...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCATGCTGCGCCATCCTTaGTGGGAAACAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCMLRHP*WETGAK
Trigger: CTTGGCTCCTGTTTCCCAGCAAGGATGGCGCAGCAT...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTTCCGGTTCAGGAACTaGATCACCTCCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGFRFRN*ITSISV
Trigger: GACAGAGATGGAGGTGATGCAGTTCCTGAACCGGAA...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGGGATGGACACTGGCTaGTCCAGCAGGGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHGMDTG*SSRAPG
Trigger: GCCTGGGGCCCTGCTGGAGCAGCCAGTGTCCATCCC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGGTGGCTTCTGCAGCTaGTGGAAGGTGGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKGGFCS*WKVAWT
Trigger: GGTCCAGGCCACCTTCCAGCAGCTGCAGAAGCCACC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCTTGCCCTGTCCTGACTaGCCCGTCACCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPLPCPD*PVTRLS
Trigger: GCTGAGCCTGGTGACGGGGCAGTCAGGACAGGGCAA...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCCAGGAAGGCTGTCTTaGCCTGTCCTGACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPPGRLS*PVLTAP
Trigger: CGGGGCAGTCAGGACAGGGCAAGACAGCCTTCCTGG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCTTGGGCAGCAGCCTCTaGTGCAGCTCCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCLGSSL*CSSHTR
Trigger: CCTGGTGTGGGAGCTGCAGCAGAGGCTGCTGCCCAA...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCTGGGCACCCTGGCTCTaGTCAAGGGTCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPWAPWL*SRVSPR
Trigger: CCTAGGGGAGACCCTTGAGCAGAGCCAGGGTGCCCA...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp AGCATAGAGGGCATGGGCCTCCAAGAGCCGAGAGACCAGACCCAATTCCAAGTGGTTACCAGCAGCCACTaGTTCTTCCCAGCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: SIEGMGLQEPRDQTQFQVVTSSH*FFPALS
Trigger: ACTAAGAGCTGGGAAGAAGCAGTGGCTGCTGGTAAC...CACTTGGAATTGGGTCTGGTCTCTCGGCTCTTGGAGGCCCATGCCCTCTATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGAGCTTTTGTTCCTCTTTGGGGACTGAAGAAGCATAGAGGGCATGGGCCTCCACTGAGGATTGAAGCCTaGTGCCTCAGGAAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: GAFVPLWGLKKHRGHGPPLRIEA*CLRKVR
Trigger: TCGCACCTTCCTGAGGCAGCAGGCTTCAATCCTCAG...TGGAGGCCCATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGGCTGGTTGGCTGCCTaGTGGGGCAGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRGWLAA*WGRSRG
Trigger: CCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCAGCC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGCCCACAGCTGCTCTTTaGCCATTGGTGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVPTAAL*PLVEKA
Trigger: GGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGG...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp CTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCAAGGACCCATCTTCTaGACCACTCACCAATACCTT +
Preference number: 4 (lower is better)
Translates to: LHSCHSAHSTLMTQELTKQGPIF*TTHQYL
Trigger: AAGGTATTGGTGAGTGGTGCAGAAGATGGGTCCTTG...CTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTTATACATGTGTCATCTaGTTCCTTAGGAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: KHTVASSRQSGLRQQPVIYTCVI*FLRNLP
Trigger: TGGCAGGTTCCTAAGGAAGCAGATGACACATGTATA...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCTATACATGTGTCATCTaGTTCCTTAGGAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSYTCVI*FLRNLP
Trigger: TGGCAGGTTCCTAAGGAAGCAGATGACACATGTATA...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTTTGATTTCCAGATACTaGCATGGAACCATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RESLLPCVAASAAALATALISRY*HGTIWC
Trigger: GCACCAGATGGTTCCATGGCAGTATCTGGAAATCAA...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCTCTCCCACGGCAAGCTaGAGGGTGGAGTTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPSPTAS*RVELAP
Trigger: GGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGA...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGGAGGGCTTTCTACGCTaGCGTGTCTTTAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGEGFLR*RVFRCG
Trigger: ACCACATCTAAAGACACGGCAGCGTAGAAAGCCCTC...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR CCA 90 bp CTGAAGGGAGCATTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCATGGTCAGTAGGCTCTaGATGAGATTCAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LKGAFLECPALQGPIFCTMVSRL*MRFRVS
Trigger: GGAGACTCTGAATCTCATCCAGAGCCTACTGACCAT...GGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGCCGCTCCCAGGTCTCTaGCCTAGACAGCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SHHWSRISVGYLWSRHSQPLPGL*PRQLHP
Trigger: AGGATGAAGCTGTCTAGGCCAGAGACCTGGGAGCGG...CTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGAGAATGAGCTCATGGTaGCGGGAACTGATTCCAACC +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGRMSSW*RELIPT
Trigger: GGTTGGAATCAGTTCCCGCCACCATGAGCTCATTCT...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACGCATCAATGGCATCATaGGCGTTAAGAAATCTGAAT +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHASMAS*ALRNLN
Trigger: ATTCAGATTTCTTAACGCCCATGATGCCATTGATGC...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGTTGTGGGTTGCTCTTTaGACAGAGCCTGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: DAGQLHALMVPHFQGPIPLWVAL*TEPVCI
Trigger: AATGCAGACAGGCTCTGTCCAAAGAGCAACCCACAA...CGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACCCATCATCCATGCTTTaGCCAAGGAGGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYPSSML*PRRMTL
Trigger: CAGGGTCATCCTCCTTGGCCAAAGCATGGATGATGG...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACGCCAGTAAAGCTGTTTaGCCACATTTATCATTCCAT +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHASKAV*PHLSFH
Trigger: ATGGAATGATAAATGTGGCCAAACAGCTTTACTGGC...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTCTTTCCTGGGGGTGGTaGAATCTTGAATATTTTGTC +
Preference number: 4 (lower is better)
Translates to: KHTVASSRQSGLRQQPVILSWGW*NLEYFV
Trigger: GACAAAATATTCAAGATTCCACCACCCCCAGGAAAG...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTAGTGTCCTCTTCCAGTaGCCGGAGAGACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEASVLFQ*PERLDP
Trigger: GGGGTCCAGTCTCTCCGGCCACTGGAAGAGGACACT...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACAGGAGCCAAGGGGCTTaGAGTGTCCTCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNRSQGA*SVLFQW
Trigger: CCACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCT...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACTAATGATGCCACCTTaGCCCCATCAGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILLMMPP*PHQEPA
Trigger: TGCAGGCTCCTGATGGGGCCAAGGTGGCATCATTAG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AGTGACCATCAGGAGCCCAATCCAGACTTGTCAGCACCCCTAAGTCCTCCTGTACTAATGATGCCACCTTaGCCCCATCAGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SDHQEPNPDLSAPLSPPVLMMPP*PHQEPA
Trigger: TGCAGGCTCCTGATGGGGCCAAGGTGGCATCATTAG...TACAGGAGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGGCTTCGGTAGGTGCTaGGGAGGGCACCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKGFGRC*GGHLAL
Trigger: AAGAGCCAGGTGCCCTCCCCAGCACCTACCGAAGCC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGCCCAAGGCCAGCACGTaGGCACCCTGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKPKAST*APWLCS
Trigger: TGAGCAGAGCCAGGGTGCCCACGTGCTGGCCTTGGG...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCAGGGCAGTCAAGGCCTaGGGAAGGACATCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPRAVKA*GRTSGP
Trigger: CGGGCCTGATGTCCTTCCCCAGGCCTTGACTGCCCT...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACATCGTAGTGTGTGTTaGAGGTGCCATCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILHRSVC*RCHLRE
Trigger: CTCCCGGAGATGGCACCTCCAACACACACTACGATG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCCACAGTTCAGGGACTTaGGGTAGGTGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCHSSGT*GRCAGR
Trigger: CCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTG...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGCACCCGATCACCATCTaGGCTGAGTGCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVHPITI*AECHRE
Trigger: CTCTCTGTGGCACTCAGCCCAGATGGTGATCGGGTG...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACACCACAGAGCCATCACTaGAGCAGGATATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTPQSHH*SRISVG
Trigger: ACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGG...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGCTGCAGAACTCCTTaGTATACATGTGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: GCWSAPRLDGPTLSRSHPGCRTP*YTCVIC
Trigger: GCAGATGACACATGTATACCAAGGAGTTCTGCAGCC...GGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCTGCCATGGAACCATCTaGTGCCCAAGCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCCHGTI*CPSHSS
Trigger: ACTGCTGTGGCTTGGGCACCAGATGGTTCCATGGCA...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCATCAGAGCACCAATGTaGCCTGGAGCCTGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCIRAPM*PGACAV
Trigger: CACAGCACAGGCTCCAGGCCACATTGGTGCTCTGAT...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCTGAACTCCAGGATCCTTaGGCTGCAGGACAAATATGC +
Preference number: 4 (lower is better)
Translates to: ASGRCETLQRQPRGAFVPELQDP*AAGQIC
Trigger: GCATATTTGTCCTGCAGCCCAAGGATCCTGGAGTTC...AGGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGAGGATTCTTTTTCTCTaGCACTGTATCACCGGCCTT +
Preference number: 4 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPRILFL*HCITGL
Trigger: AAGGCCGGTGATACAGTGTCAGAGAAAAAGAATCCT...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp ACGGCTGCAGAACTCCTTGGTATACATGTGTCATCTGCTTCCTTAGGAACCTGCGCCATCCGAAGCTGCTaGCGGCTTAGGTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TAAELLGIHVSSASLGTCAIRSC*RLRWQR
Trigger: TCTTTGCCACCTAAGCCGTCAGCAGCTTCGGATGGC...GCAGGTTCCTAAGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGCCTGCTCCGCCCTCGTaGTCATCATCCCAATCAACA +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQPAPPS*SSSQST
Trigger: TGTTGATTGGGATGATGATCACGAGGGCGGAGCAGG...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTCATCTGGCACAGAGCTaGGGAAGCTGGAATCCCGGA +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAHLAQS*GSWNPG
Trigger: TCCGGGATTCCAGCTTCCTCAGCTCTGTGCCAGATG...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGCTGGTTGTTAAATGGTaGCTCCTCCAGCCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVLVVKW*LLQPLP
Trigger: GGGAAGCGGCTGGAGGAGTCACCATTTAACAACCAG...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGGCCTCAGGTGATCGGTaGCCAAGCGCAGGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKASGDR*PSAGRA
Trigger: CGCTCTACCTGCGCTTGGTCACCGATCACCTGAGGC...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACAGAGCTGAGCTGCAATaGGGATGTGTGCCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNRAELQ*GCVPCP
Trigger: AGGACACGGCACACATCCTCATTGCAGCTCAGCTCT...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATGCCTCCATCAGTGCTaGAACTACAGCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILCLHQC*NYSSSQ
Trigger: CTGTGAGCTGCTGTAGTTTCAGCACTGATGGAGGCA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp GAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGACCCAGTCAGTCAGCTCCACGCCTTaGTGGTCCCACACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: EQDISRLSLVQAQPVTQSVSSTP*WSHTFK
Trigger: CTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGAC...TGACTGGGTCACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCCCAAGCCACAGCAGTaGCGGCTGCAGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPPKPQQ*RLQNSL
Trigger: CAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGGCTGGCACACAAAAATaGGGACTCAGATTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPAGTQK*GLRFRF
Trigger: AAACCTGAATCTGAGTCCTCATTTTTGTGTGCCAGC...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACCTAGGGCCCGCGAGTaGTGCAAGAATTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILPRARE*CKNSKT
Trigger: GGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGGGCAGGAGAATCGCTTaGACCCAGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQGRRIA*TQEAEV
Trigger: AACCTCTGCTTCCTGGGTTCAAGCGATTCTCCTGCC...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGATAGACCAAGACAGTaGGGCCTGGCAGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCDRPRQ*GLAAGA
Trigger: TGCCCCTGCTGCCAGGCCGCACTGTCTTGGTCTATC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTCCCAATCAACAGCAGTaGATAGTTCAGCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAPNQQQ*IVQRGP
Trigger: GGGCCCCCGCTGAACTATGCACTGCTGTTGATTGGG...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCGCTCGGGCCTGCAGTaGTGGCAGCACAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFRSGLQ*WQHRPQ
Trigger: CTGAGGTCTGTGCTGCCAGCACTGCAGGCCCGAGCG...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGGGGCCGCTCGGGCCTaGAGTGCTGGCAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRGAARA*SAGSTD
Trigger: GTCTGTGCTGCCAGCACTGCAGGCCCGAGCGGCCCC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCCGCCCTGAAGGGTACTaGTGGGCCCAGTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCRPEGY*WAQWKC
Trigger: ACACTTCCACTGGGCCCAGCAGTACCCTTCAGGGCG...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGGCTCCTTCTCCAGTGTaGTCAGGATGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQAPSPV*SGCAAA
Trigger: TGCTGCAGCACATCCTGAGCACACTGGAGAAGGAGC...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAAACACTCAGCACTCCGTaGAGCTGGTCCACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SGLHLARFHRIPSELAHKTLSTP*SWSTVK
Trigger: TTTGACTGTGGACCAGCTGCACGGAGTGCTGAGTGT...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp ATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTGTCACCAGCGAAGGTGCGAAACACTaGAACGTCAGCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: ILGLSHSLTSLSFEAVTSEGAKH*NVSLGE
Trigger: CTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTC...GCTGGTGACAGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCACCCGACAACCATGCTaGAGGTCCCAGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPTRQPC*RSQSSR
Trigger: CCTGGAGCTCTGGGACCTGCAGCATGGTTGTCGGGT...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGAAGGCAGCCAGCCGTaGCCCTTCTCGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLEGSQP*PFSPGP
Trigger: TGGGCCTGGCGAGAAGGGGCACGGCTGGCTGCCTTC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGAACTGGCAACCCGCATaGAGGAAAAGCGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQNWQPA*RKSAAA
Trigger: TGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTT...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGAAAGGGAACCCAGGTaGCCACGGGGCCGACCCAGA +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHEREPR*PRGRPR
Trigger: TCTGGGTCGGCCCCGTGGGCACCTGGGTTCCCTTTC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGAAAGGGAACCCAGGTaGCCACGGGGCCGACCCAGA +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFEREPR*PRGRPR
Trigger: TCTGGGTCGGCCCCGTGGGCACCTGGGTTCCCTTTC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TGCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCCAAGGACCCATCTTCTaGACCACTCACCAATACCTT +
Preference number: 4 (lower is better)
Translates to: CLRKVRNTATSASGSFCSQGPIF*TTHQYL
Trigger: AAGGTATTGGTGAGTGGTGCAGAAGATGGGTCCTTG...GGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACTTGAGTGCCCAGCCCTaGAAGGACCCATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNLSAQP*KDPSSA
Trigger: TGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAA...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGTGCTCCTCCACAGCTaGCACAGCGCTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKVLLHS*HSAHST
Trigger: AGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGCTTCCTTAGGAACCTaGCAGAGCCGTACAGAACCA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILASLGT*QSRTEP
Trigger: TGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GGAGCTTTTGTTCCTCTTTGGGGACTGAAGAAGCATAGAGGGCATGGGCCTCCAGCTTCCTTAGGAACCTaGCAGAGCCGTACAGAACCA +
Preference number: 4 (lower is better)
Translates to: GAFVPLWGLKKHRGHGPPASLGT*QSRTEP
Trigger: TGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGC...TGGAGGCCCATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp TGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGCTCATTCCGCAGTTTCACTTaGCACTCGCTGATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: WSAPRLDGPTLSRSHPGSFRSFT*HSLIFS
Trigger: TGAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAA...TGAGCCGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCATCCCCTGGCTTCATaGAAAGTAACTTCAAATCTG +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRHPLAS*KVTSNL
Trigger: CAGATTTGAAGTTACTTTGCATGAAGCCAGGGGATG...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTCTCCTGATTCCTTTTaGCTCAAGAAAGAAAGAACT +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHSPDSF*LKKERT
Trigger: AGTTCTTTCTTTCTTGAGGCAAAAGGAATCAGGAGA...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACCAGGAAGCAGAGGTTaGACTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILPGSRG*TELRLH
Trigger: GTGCAATCTCAGCTCAGTGCAACCTCTGCTTCCTGG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGAGAGTAAAACTCAGTaGCCTTTAACTCCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: KYTLPCTSPTASCRVELAESKTQ*PLTPQV
Trigger: GACTTGGGGAGTTAAAGGGCACTGAGTTTTACTCTC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR GCA 90 bp GAGTGTATCATCGGAGAGGAACAAACAAGCAGAGATTCCATCACAGCCACTCACCTTCCAGAGCTGAGCTaGGCAGACTCTGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: ECIIGEEQTSRDSITATHLPELS*ADSGRG
Trigger: GCCTCGTCCAGAGTCTGCGCAGCTCAGCTCTGGAAG...GTGAGTGGCTGTGATGGAATCTCTGCTTGTTTGTTCCTCTCCGATGATACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGGCGGGGGTGTCTCTTaGCCCGGTGCTTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLGGGVS*PGASEG
Trigger: ACCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGCATGCTGGAGTCTCTaGAGAATGAGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILACWSL*RMSSWW
Trigger: CCACCATGAGCTCATTCTCCAGAGACTCCAGCATGC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGCAACAAAGAGGCACTTaGAATTCACACGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGQQRGT*NSHAAS
Trigger: ACTGGCAGCGTGTGAATTCCAAGTGCCTCTTTGTTG...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACAGAGTGTCACATCATTaGGATTCAAATCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHRVSHH*DSNLLT
Trigger: TGTCAACAGATTTGAATCCCAATGATGTGACACTCT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAACATGTTCCAGAAGATaGGAGGCCCCATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILTCSRR*EAPCSA
Trigger: TGCAGAGCATGGGGCCTCCCATCTTCTGGAACATGT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAAGTGGCCGGAGAGACTaGACCCCTGTCTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKSGRRD*TPVFPG
Trigger: CCCAGGAAAGACAGGGGTCCAGTCTCTCCGGCCACT...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAAGGCCCAGTGGAAGTGTaGATGGTCAGGAAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SGLHLARFHRIPSELAHKGPVEV*MVRKVV
Trigger: TACAACCTTCCTGACCATCCACACTTCCACTGGGCC...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGAGTCATCGTCTGGGATaGACACTGGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQSHRLG*TLAAPA
Trigger: TGCTGGAGCAGCCAGTGTCCATCCCAGACGATGACT...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGTGAGGGCAAGACCCTaGTCAGGACGAGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKVRARP*SGRAPE
Trigger: TTCTGGGGCTCGTCCTGACCAGGGTCTTGCCCTCAC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GCCATAACCGTGTGGCCCCATCTAGCCCGACGGTTACCACCAGAAGCTCTGACCGCTTTTGTTCCTCTTTaGGGACTGAAGAAGCATAGA +
Preference number: 4 (lower is better)
Translates to: AITVWPHLARRLPPEALTAFVPL*GLKKHR
Trigger: TCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGC...GGTCAGAGCTTCTGGTGGTAACCGTCGGGCTAGATGGGGCCACACGGTTATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCAGGAGCCGGGGGTACTaGCTGAGGATTGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPRSRGY*LRIEAC
Trigger: GCAGGCTTCAATCCTCAGCCAGTACCCCCGGCTCCT...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTTGGTTGGCTGCCTGCTaGGGCAGGAGCCGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLWLAAC*GRSRGY
Trigger: GTACCCCCGGCTCCTGCCCCAGCAGGCAGCCAACCA...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCATCGTAGTGTGTGTTaGAGGTGCCATCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNHRSVC*RCHLRE
Trigger: CTCCCGGAGATGGCACCTCCAACACACACTACGATG...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACTATTACCTGCCCCTCTaGGTGGAAGGCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYYYLPL*VEGNTV
Trigger: AACTGTGTTGCCTTCCACCCAGAGGGGCAGGTAATA...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCCAGCCCAGCTGCCTGTaGCTATTACCTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCQPSCL*LLPAPL
Trigger: CAGAGGGGCAGGTAATAGCCACAGGCAGCTGGGCTG...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATTGAGCCCATCCACCTaGAAGAAGCTGATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILLSPST*KKLMLP
Trigger: TGGCAGCATCAGCTTCTTCCAGGTGGATGGGCTCAA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GGTCCCAGAGCCCCACAGAGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTTGAGCCCATCCACCTaGAAGAAGCTGATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPRAPQSHHWSRISVGYLLSPST*KKLMLP
Trigger: TGGCAGCATCAGCTTCTTCCAGGTGGATGGGCTCAA...AAGATAACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGGGGCTCTGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGATGCCATAACCGTGTaGCCCCATCTAGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKDAITV*PHLARR
Trigger: CCGTCGGGCTAGATGGGGCCACACGGTTATGGCATC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGGTCCATTCTCCTTCTaGGCTGCATTTGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILGPFSF*AAFGQV
Trigger: AACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCTTCCCTGCAGGTAGATaGGTCTGTCCCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCFPAGR*VCPWSL
Trigger: CAAACTCCAGGGACAGACCCATCTACCTGCAGGGAA...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACTCCTCCTGGCAAGAATaGCATCCTAGGGTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNSSWQE*HPRVLG
Trigger: CCCTAGGACCCTAGGATGCCATTCTTGCCAGGAGGA...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGTCCTCCTGGCAAGAATaGCATCCTAGGGTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQSSWQE*HPRVLG
Trigger: CCCTAGGACCCTAGGATGCCATTCTTGCCAGGAGGA...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCAAGTCCTTGAATTCTTaGCCACAGAAGACATTTCCT +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCKSLNS*PQKTFP
Trigger: AGGAAATGTCTTCTGTGGCCAAGAATTCAAGGACTT...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR CCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGTGGAAACCAGGGCATTaGATAGAAATAAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRWKPGH*IEIKSL
Trigger: GAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR CCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGATCCTCTGGTCAGGATaGAAACCAGGGCATTGGATA +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGILWSG*KPGHWI
Trigger: TATCCAATGCCCTGGTTTCCATCCTGACCAGAGGAT...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAACTCAGGTAGCACATaGAGGGCTTTCTACGCTGCC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILNSGST*RAFYAA
Trigger: GGCAGCGTAGAAAGCCCTCCATGTGCTACCTGAGTT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATCCGAAGCATGGCCATaGAGGGAAGCTTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILSEAWP*REASHF
Trigger: AAAATGGGAAGCTTCCCTTCATGGCCATGCTTCGGA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGGAGTCTCTGGAGAATaGGCTCATGGTGGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKGVSGE*AHGGGN
Trigger: GTTCCCGCCACCATGAGCTCATTCTCCAGAGACTCC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCGCCATCCGAAGCTGCTaGCGGCTTAGGTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPAIRSC*RLRWQR
Trigger: TCTTTGCCACCTAAGCCGTCAGCAGCTTCGGATGGC...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGCGCATCAGTACAGCCTaGGAGTGTCACATCATTGGG +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQRISTA*ECHIIG
Trigger: CCCAATGATGTGACACTCTCAGGCTGTACTGATGCG...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCGATTCCGTGAAGGCTaGTACGGTGAGGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHRFREG*YGEGPL
Trigger: GAGCGGCCCCTCACCGTATCAGCCTTCACGGAATCG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACAGGCTGGAGCTTTGCTaGTTTTTCATGGTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNRLELC*FFMVRG
Trigger: ACCCCGGACCATGAAAAATCAGCAAAGCTCCAGCCT...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGAGGCTGGAGCTTTGCTaGTTTTTCATGGTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SHHWSRISVGYLWSRHSQRLELC*FFMVRG
Trigger: ACCCCGGACCATGAAAAATCAGCAAAGCTCCAGCCT...CTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGGTGATTTGGTACTGGTaGGCCTTAGTCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVVIWYW*ALVCST
Trigger: GGTGCTGCAGACTAAGGCTCACCAGTACCAAATCAC...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCACCTGGAAGAAGCTaGTGCTGCCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFPPGRS*CCQPSC
Trigger: GCAGCTGGGCTGGCAGCATCAGCTTCTTCCAGGTGG...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGACCCTGACCACACCTaGACCTTGCCATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKDPDHT*TLPSSP
Trigger: TGGAGAGGATGGCAAGGTTCAGGTGTGGTCAGGGTC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAGCCCCCTGGGAACCTaGAGAGATTTTGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILSPLGT*RDFVDP
Trigger: AGGATCTACAAAATCTCTTCAGGTTCCCAGGGGGCT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGAGAATTCGGTTCAGGTaGAGACTGTGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVRIRFR*RLCCGH
Trigger: GTGGCCACAGCACAGTCTTCACCTGAACCGAATTCT...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557314.5
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGGACTCGGTGGCTTCTaGAGCTGCTGGAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFGLGGF*SCWKVA
Trigger: GGCCACCTTCCAGCAGCTGCAGAAGCCACCGAGTCC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCTGGGTCTGGCCAGGATaGAGGGACTCAGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCWVWPG*RDSADL
Trigger: CAAGTCTGCTGAGTCCCTGCATCCTGGCCAGACCCA...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AGTGACCATCAGGAGCCCAATCCAGACTTGTCAGCACCCCTAAGTCCTCCTGTAAGTCTCTCAGACACCTaGTCATACAGCGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SDHQEPNPDLSAPLSPPVSLSDT*SYSVKS
Trigger: GCTCTTCACGCTGTATGAGCAGGTGTCTGAGAGACT...TACAGGAGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCAGGACATCAGGCCCGTaGTCCTTCTCCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPRTSGP*SFSSVL
Trigger: GAGCACACTGGAGAAGGAGCACGGGCCTGATGTCCT...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCATAGCAACGTTTAGCTaGTGTTCTCAGGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCIATFS*CSQGPI
Trigger: GATGGGCCCCTGAGAACAGCAGCTAAACGTTGCTAT...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR GCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGGCAACTTCGGAAGGTaGCTGAGGCATCAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKGNFGR*LRHQRH
Trigger: GTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGTGCTGGAAGGCCAGCTaGCCACGGACTGTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWCWKAS*PRTVSH
Trigger: GTGGGACACAGTCCGTGGGCAGCTGGCCTTCCAGCA...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCCTGTGGCTATTACCTaGCCCTCTGGGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPPVAIT*PSGWKA
Trigger: TGCCTTCCACCCAGAGGGGCAGGTAATAGCCACAGG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp ACGGCTGCAGAACTCCTTGGTATACATGTGTCATCTGCTTCCTTAGGAACCTGCTTGAGTGCCCAGCCCTaGAAGGACCCATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TAAELLGIHVSSASLGTCLSAQP*KDPSSA
Trigger: TGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAA...GCAGGTTCCTAAGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTGGTATACATGTGTCAACAGCCTTAGCTTCCTaGCACAAGATTAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GAQATAVTAAELLGIHVSTALAS*HKISSP
Trigger: TGGGGAACTAATCTTGTGGCAGGAAGCTAAGGCTGT...TGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGTGGCCTGGAGCCTGTaGTGTGGCCACAGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFVAWSL*CGHSLS
Trigger: GCTAAGGCTGTGGCCACAGCACAGGCTCCAGGCCAC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGCTGCAGGACAAATATaGCATACTCCTTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILAAGQI*HTPCGW
Trigger: CCACCCACAAGGAGTATGGCATATTTGTCCTGCAGC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCTCTCCTGATTCCTTTTaGCTCAAGAAAGAAAGAACT +
Preference number: 4 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCSPDSF*LKKERT
Trigger: AGTTCTTTCTTTCTTGAGGCAAAAGGAATCAGGAGA...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGTCAGAAAGTACACATTaGCCTGCACGTCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVSESTH*PARLPR
Trigger: CCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGA...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGGTGTCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWGVSAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGACACC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTTCTGGATTCTGCCGGTaGGAAGGGTGGCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLSGFCR*EGWQPG
Trigger: CCCCGGCTGCCACCCTTCCCACCGGCAGAATCCAGA...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCCAGCTTGTATATGCCTaGGGCGTCCGATTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCQLVYA*GVRFPQ
Trigger: CTGCGGGAATCGGACGCCCCAGGCATATACAAGCTG...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATCTGGAACAAGGGGCTaGCAGACACAGTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILSGTRG*QTQCSL
Trigger: TAAAGAGCACTGTGTCTGCCAGCCCCTTGTTCCAGA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCGATATCTGTAGACTCTaGAACAAGGGGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCDICRL*NKGLAD
Trigger: GTCTGCCAGCCCCTTGTTCCAGAGTCTACAGATATC...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAAATTTGTCCGTCATaGCAGTACGGAGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNQICPS*QYGDRR
Trigger: CCGCCTGTCTCCGTACTGCCATGACGGACAAATTTG...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CCGGGTGCCGAACCCTTCCGCAGTTTCACTTGCCACTCGCTGATTTTCTCATCAACATCTGTGAGAAAATaGAGGCTCCATCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGAEPFRSFTCHSLIFSSTSVRK*RLHPWR
Trigger: TCTCCAGGGATGGAGCCTCCATTTTCTCACAGATGT...TGATGAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAGGGTTCGGCACCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCCGCTCCCAGGTCTCTaGCCTAGACAGCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPPLPGL*PRQLHP
Trigger: AGGATGAAGCTGTCTAGGCCAGAGACCTGGGAGCGG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGCATAGAGGGCATGGGCCTCCAAGAGCCGAGAGACCAGACCCAATTCCAAGTGAAAGAAACCTCCGCCTaGGACGGTTCTTTTCATTTC +
Preference number: 4 (lower is better)
Translates to: SIEGMGLQEPRDQTQFQVKETSA*DGSFHF
Trigger: GAAATGAAAAGAACCGTCCCAGGCGGAGGTTTCTTT...CACTTGGAATTGGGTCTGGTCTCTCGGCTCTTGGAGGCCCATGCCCTCTATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGCATAGAGGGCATGGGCCTCCAAGAGCCGAGAGACCAGACCCAATTCCAAGTGCATATTTCCACTGTCTaGCCTTGTGTACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SIEGMGLQEPRDQTQFQVHISTV*PCVLSA
Trigger: AGCTGAGAGTACACAAGGCCAGACAGTGGAAATATG...CACTTGGAATTGGGTCTGGTCTCTCGGCTCTTGGAGGCCCATGCCCTCTATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTCAAGACAGTGCGGCCTaGCAGCAGGGGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLQDSAA*QQGQAV
Trigger: CACAGCCTGCCCCTGCTGCCAGGCCGCACTGTCTTG...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCTCCACAGGAACCCTTTaGCCAGCCAGAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPSTGTL*PARDSR
Trigger: CCTGCTGTCTCTGGCTGGCCAAAGGGTTCCTGTGGA...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAGAGTGTCACATCATTaGGATTCAAATCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVRVSHH*DSNLLT
Trigger: TGTCAACAGATTTGAATCCCAATGATGTGACACTCT...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GAGTGTATCATCGGAGAGGAACAAACAAGCAGAGATTCCATCACAGCCACTCACGCAGCTGCTGGAAGGTaGCCTGGACCAAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: ECIIGEEQTSRDSITATHAAAGR*PGPSHR
Trigger: ACGATGACTTGGTCCAGGCCACCTTCCAGCAGCTGC...GTGAGTGGCTGTGATGGAATCTCTGCTTGTTTGTTCCTCTCCGATGATACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCCGGGCAGGACTCGGTaGCTTCTGCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHPGRTR*LLQLLE
Trigger: TTCCAGCAGCTGCAGAAGCCACCGAGTCCTGCCCGG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGGCTTCGGTAGGTGCTaGGGAGGGCACCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFGFGRC*GGHLAL
Trigger: AAGAGCCAGGTGCCCTCCCCAGCACCTACCGAAGCC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCATCAGGACCTGGGTCTaGCCAGGATGCAGGGACTCA +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPIRTWV*PGCRDS
Trigger: TGAGTCCCTGCATCCTGGCCAGACCCAGGTCCTGAT...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCAAACTGCGCAGACTCTaGACGAGGCAGGCAAACGGG +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCKLRRL*TRQANG
Trigger: CCCGTTTGCCTGCCTCGTCCAGAGTCTGCGCAGTTT...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGAGCTTTTGTTCCTCTTTaGGGACTGAAGAAGCATAGA +
Preference number: 4 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRAFVPL*GLKKHR
Trigger: TCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGC...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAAGCAGCGAGGCTTGGTaGCAAAGAGGTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKSSEAW*QRGESR
Trigger: CCTGGACTCACCTCTTTGCCACCAAGCCTCGCTGCT...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCTCCCAAGCACACGGTaGCTAGCAGCCGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHLPSTR*LAAGSL
Trigger: CAGACTGCCGGCTGCTAGCCACCGTGTGCTTGGGAG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACGGCTGCAGAACTCCTTaGTATACATGTGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: FLECPALQGPIFCTTHQYGCRTP*YTCVIC
Trigger: GCAGATGACACATGTATACCAAGGAGTTCTGCAGCC...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATTCCAGATACTGCCATaGAACCATCTGGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILFQILP*NHLVPK
Trigger: CTTGGGCACCAGATGGTTCCATGGCAGTATCTGGAA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGAGCACCAATGTGGCCTaGAGCCTGTGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKSTNVA*SLCCGH
Trigger: GTGGCCACAGCACAGGCTCCAGGCCACATTGGTGCT...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGCTCCAGATTTCAGATaGAGCATCCCCTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILAPDFR*SIPWLH
Trigger: ATGAAGCCAGGGGATGCTCCATCTGAAATCTGGAGC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCGCTCCAGATTTCAGATaGAGCATCCCCTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCAPDFR*SIPWLH
Trigger: ATGAAGCCAGGGGATGCTCCATCTGAAATCTGGAGC...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGACTCAGATTCAGGTTTaGCTTGAGTTATCGATATTA +
Preference number: 4 (lower is better)
Translates to: HVSHGKLQGGVSAQPRFQTQIQV*LELSIL
Trigger: TAATATCGATAACTCAAGCCAAACCTGAATCTGAGT...CTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp AGGTGTGTGCCGAGGACCAGATCAGAGCACCAATGTGGCCTGGAGCCTGTGCTGATCATTATTCCCGAGTaGCACATCTTCATTCCCAAT +
Preference number: 4 (lower is better)
Translates to: RCVPRTRSEHQCGLEPVLIIIPE*HIFIPN
Trigger: ATTGGGAATGAAGATGTGCCACTCGGGAATAATGAT...CAGCACAGGCTCCAGGCCACATTGGTGCTCTGATCTGGTCCTCGGCACACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTATGCCCGGCCTCCTCTaGGTAGTTCTGAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAMPGLL*VVLRKG
Trigger: CCCTTTTCTCAGAACTACCCAGAGGAGGCCGGGCAT...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCAGGCTGGAGTGCAGTaGTGTCTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPQAGVQ*CLGSLQ
Trigger: TTGCAGTGAGCCGAGACACCACTGCACTCCAGCCTG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGTGTTCAAATGTCCTATaGTCTCACAATCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRCSNVL*SHNPVV
Trigger: AACCACTGGATTGTGAGACCATAGGACATTTGAACA...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR TCA 90 bp ATGGAGGTTGGTAAGGAACTTCGAAAGAAGTCCACGGTTCCCGCTCTGGAGCAGTGGGTAGATACATGCTaGTGTAGTTTCTCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: MEVGKELRKKSTVPALEQWVDTC*CSFSKG
Trigger: GCCCTTGGAGAAACTACATCAGCATGTATCTACCCA...CTGCTCCAGAGCGGGAACCGTGGACTTCTTTCGAAGTTCCTTACCAACCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GGAGCTTTTGTTCCTCTTTGGGGACTGAAGAAGCATAGAGGGCATGGGCCTCCACCAGCTTCTTCAGGGTaGACCTTGGAGGATTCTTTT +
Preference number: 4 (lower is better)
Translates to: GAFVPLWGLKKHRGHGPPPASSG*TLEDSF
Trigger: AAAAGAATCCTCCAAGGTTCACCCTGAAGAAGCTGG...TGGAGGCCCATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp CTGTCCTTCGAAGCTGTCACCAGCAACTCAGGTAGCACATGGAGGGCTGTGACAGGGGTGGTGGAATCTTaGATATTTTGTCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: LSFEAVTSNSGSTWRAVTGVVES*IFCPFG
Trigger: GCCAAATGGACAAAATATTCAAGATTCCACCACCCC...TGTCACAGCCCTCCATGTGCTACCTGAGTTGCTGGTGACAGCTTCGAAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTGGTATCTGCGGCAGGTaGTCCCTTTCTGTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAGICGR*SLSVCL
Trigger: TAAGCAGACAGAAAGGGATCACCTGCCGCAGATACC...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR TCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCATGTCTTCCAGAGCTaGGCTGCAATGAGGATGTGT +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNHVFQS*AAMRMC
Trigger: ACACATCCTCATTGCAGCTCAGCTCTGGAAGACATG...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGCCGGGGGTACTGGCTaGGGATTGAAGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRAGGTG*GLKPAA
Trigger: GGCAGCAGGCTTCAATCCTCAGCCAGTACCCCCGGC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCCACAGCAGTAGGGGATaGGGAAACTGCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCHSSRG*GNCQRQ
Trigger: CTGTCTCTGGCAGTTTCCTCATCCCCTACTGCTGTG...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAACACAGCAGTAGGGGATaGGGAAACTGCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKHSSRG*GNCQRQ
Trigger: CTGTCTCTGGCAGTTTCCTCATCCCCTACTGCTGTG...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAATCAGGCAGCAGCCAGTaGTTTGGTACTGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKSGSSQ*FGTGEP
Trigger: AGGCTCACCAGTACCAAATCACTGGCTGCTGCCTGA...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACCACCTGGAAGAAGCTaGTGCTGCCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPPPGRS*CCQPSC
Trigger: GCAGCTGGGCTGGCAGCATCAGCTTCTTCCAGGTGG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATGATCACCATCTGGGCTaGGTGCCACAGAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHDHHLG*VPQRGQ
Trigger: CTGCCCTCTCTGTGGCACTCAGCCCAGATGGTGATC...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGTCAGCTCCACGCCTTaGTGGTCCCACACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKVSSTP*WSHTFK
Trigger: CTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGAC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp GAAGCCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGATTCAGGTTTGGCTTaGGTTATCGATATTAGGGTC +
Preference number: 4 (lower is better)
Translates to: EAKSSWEVASPSTGFWNLDSGLA*VIDIRV
Trigger: GACCCTAATATCGATAACTCAAGCCAAACCTGAATC...CAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATGTTCTAAATCCACATaGGAACACAGGCAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILCSKST*EHRQAY
Trigger: GTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGCTTCGCTCTGGATTCTaGCGGTGGGAAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWLRSGF*RWEGWQ
Trigger: CTGCCACCCTTCCCACCGGCAGAATCCAGAGCGAAG...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCAGGTCCCGCTCCCCATaGATGTCTCGGAAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCRSRSP*MSRKVD
Trigger: ATCCACTTTCCGAGACATGCATGGGGAGCGGGACCT...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACTTCCGGTTCAGGAACTaGATCACCTCCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNFRFRN*ITSISV
Trigger: GACAGAGATGGAGGTGATGCAGTTCCTGAACCGGAA...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACCAGGGGCTGGTTGGCTaGCTGCTGGGGCAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENQGLVG*LLGQEP
Trigger: CGGCTCCTGCCCCAGCAGGCAGCCAACCAGCCCCTG...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCTGCTGCCAGCCCAGCTaGCTGTGGCTATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFCCQPS*LWLLPA
Trigger: GGCAGGTAATAGCCACAGGCAGCTGGGCTGGCAGCA...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAGATAGAGGCTCCGGGTaGCCCCAGGTCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPDRGSG*PQVLGD
Trigger: GTCACCAAGGACCTGGGGGCACCCGGAGCCTCTATC...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACACTGCCACATCCAGTaGCTGACCCTGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPHCHIQ*LTLSPL
Trigger: CAGGGGGCTCAGGGTCAGGCACTGGATGTGGCAGTG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GGTCCCAGAGCCCCACAGAGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTCAAGGACCCATCTTCTaGACCACTCACCAATACCTT +
Preference number: 4 (lower is better)
Translates to: GPRAPQSHHWSRISVGYLQGPIF*TTHQYL
Trigger: AAGGTATTGGTGAGTGGTGCAGAAGATGGGTCCTTG...AAGATAACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGGGGCTCTGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCCACACCAAGAGTGGATaGCATAACCGTGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCHTKSG*HNRVAP
Trigger: TGGGGCCACACGGTTATGGCATCCACTCTTGGTGTG...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAACAGCCTTAGCTTCCTaGCACAAGATTAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILTALAS*HKISSP
Trigger: TGGGGAACTAATCTTGTGGCAGGAAGCTAAGGCTGT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCACAGCCTTAGCTTCCTaGCACAAGATTAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCTALAS*HKISSP
Trigger: TGGGGAACTAATCTTGTGGCAGGAAGCTAAGGCTGT...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATTGGCTCACTATCCATaGTGGCATCACTATCCATGC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILLAHYP*WHHYPC
Trigger: GCATGGATAGTGATGCCAGCATGGATAGTGAGCCAA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTTCTCCCACGGCAAGCTaGAGGGTGGAGTTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLSPTAS*RVELAP
Trigger: GGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGA...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGGTGTCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLGVSAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGACACC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGTTGCCCAGGCTGGAGTaGAGTGGTGTCTCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWLPRLE*SGVSAH
Trigger: GTGAGCCGAGACACCACTGCACTCCAGCCTGGGCAA...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TGGGCCGGGCACAATGGCTCACGCCTCCTCTGGGTAGTTCTGAGAAAAGGGCTGAAGCAAAGGCTAACCTaGTCAATAGATTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: WAGHNGSRLLWVVLRKGLKQRLT*SIDSSI
Trigger: TATGGAAGAATCTATTGAGCAGGTTAGCCTTTGCTT...CAGCCCTTTTCTCAGAACTACCCAGAGGAGGCGTGAGCCATTGTGCCCGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGCAGAAACTTCGCTCTaGATTCTGCCGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKAETSL*ILPVGR
Trigger: CCTTCCCACCGGCAGAATCCAGAGCGAAGTTTCTGC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GTGAAGACTCAAATTTCCGGGTGCCGAACCCTTCCGCAGTTTCACTTGCCACTCGCAGACACATGCCCATaGAGTTTTTCCATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VKTQISGCRTLPQFHLPLADTCP*SFSMAE
Trigger: TTCAGCCATGGAAAAACTCCATGGGCATGTGTCTGC...GAGTGGCAAGTGAAACTGCGGAAGGGTTCGGCACCCGGAAATTTGAGTCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCTGGCCAAGATGTTATTaGCCACATTCCGGACGTTCA +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCWPRCY*PHSGRS
Trigger: TGAACGTCCGGAATGTGGCCAATAACATCTTGGCCA...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp ATCTGCTTCCTTAGGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTGCAAGAAAGCAGCAATaGCCAAGATGTTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: ICFLRNLPEPYRTILRGGARKQQ*PRCYWP
Trigger: TGGCCAATAACATCTTGGCCATTGCTGCTTTCTTGC...ACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCTGCGCCATCCTTGCTaGGAAACAGGAGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFLRHPC*ETGAKG
Trigger: CCCCTTGGCTCCTGTTTCCCAGCAAGGATGGCGCAG...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTTCGGGCCTGCAGTGCTaGCAGCACAGACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLSGLQC*QHRPQQ
Trigger: CTGCTGAGGTCTGTGCTGCCAGCACTGCAGGCCCGA...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCCGAGCCCCAGAAAAGTaGAAGAAGACTAATGATGCC +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCRAPEK*KKTNDA
Trigger: GGCATCATTAGTCTTCTTCCACTTTTCTGGGGCTCG...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGTCGATGATCAGGACCTaGGTCTGGCCAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKSMIRT*VWPGCR
Trigger: CCTGCATCCTGGCCAGACCCAGGTCCTGATCATCGA...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGCAGCAGTCGCATCTaGTTGTTAAATGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCSSSRI*LLNGDS
Trigger: GGAGTCACCATTTAACAACCAGATGCGACTGCTGCT...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAAGGGCAGTCAAGGCCTaGGGAAGGACATCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPRAVKA*GRTSGP
Trigger: CGGGCCTGATGTCCTTCCCCAGGCCTTGACTGCCCT...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACTGCCAGAGACAGGCTaGAGCTTTGCTGATTTTTCA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILLPETG*SFADFS
Trigger: TGAAAAATCAGCAAAGCTCCAGCCTGTCTCTGGCAG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGCCACAGAGCCATCACTaGAGCAGGATATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SHHWSRISVGYLWSRHSQPQSHH*SRISVG
Trigger: ACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGG...CTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAGCAGCAGCACGGACTaGGCCGCTGTGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVSSSTD*AAVSQE
Trigger: CTCCTGGGACACAGCGGCCCAGTCCGTGCTGCTGCT...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CATTCCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCGCCCGCCGCCACACCTaGCTAACTTTTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: HSQFRKYTLPCTSPTASCARRHT*LTFCIF
Trigger: AAAAATACAAAAAGTTAGCCAGGTGTGGCGGCGGGC...GCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR TCA 90 bp ATCTGCTTCCTTAGGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTGAGTTTTTCCATGGCTaGAACTCAGCTTGTATATGC +
Preference number: 4 (lower is better)
Translates to: ICFLRNLPEPYRTILRGGEFFHG*NSACIC
Trigger: GCATATACAAGCTGAGTTTCAGCCATGGAAAAACTC...ACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCAGAGTCTCCAGAGGTaGGCTTCACGGCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHQSLQR*ASRPDP
Trigger: AGGATCTGGCCGTGAAGCTCACCTCTGGAGACTCTG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGTGGATGTGCAGTCGCTaGACCAGCTTCTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKWMCSR*TSFFRV
Trigger: CACCCTGAAGAAGCTGGTTCAGCGACTGCACATCCA...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp ATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTGTCACCAGCTCCGAAGCATGGCCATaGAGGGAAGCTTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: ILGLSHSLTSLSFEAVTSSEAWP*REASHF
Trigger: AAAATGGGAAGCTTCCCTTCATGGCCATGCTTCGGA...GCTGGTGACAGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCGCATCAGTACAGCCTaGGAGTGTCACATCATTGGG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPRISTA*ECHIIG
Trigger: CCCAATGATGTGACACTCTCAGGCTGTACTGATGCG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGGTCTCGGAAAGTGGATaGAATGAAAAGCCGGATGCT +
Preference number: 4 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVVSESG*NEKPDA
Trigger: AGCATCCGGCTTTTCATTTCATCCACTTTCCGAGAC...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTACGTTGCACTGTGTCCTaGAGAAGGCGTGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVRCTVS*RRRGRA
Trigger: TGCCCGGCCACGCCTTCTTCAGGACACAGTGCAACG...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCGTTGCACTGTGTCCTaGAGAAGGCGTGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRRCTVS*RRRGRA
Trigger: TGCCCGGCCACGCCTTCTTCAGGACACAGTGCAACG...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp ACGGCTGCAGAACTCCTTGGTATACATGTGTCATCTGCTTCCTTAGGAACCTGCAGCCCCCTGGGAACCTaGAGAGATTTTGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: TAAELLGIHVSSASLGTCSPLGT*RDFVDP
Trigger: AGGATCTACAAAATCTCTTCAGGTTCCCAGGGGGCT...GCAGGTTCCTAAGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR TCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGGCCACAGCTGCACTGTaGAATCCTCTGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKATAAL*NPLRQK
Trigger: CTTCTGCCTCAGAGGATTTCACAGTGCAGCTGTGGC...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGATGCTCTGTTCAAATTaGATGTTGGCCAACATCACT +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGMLCSN*MLANIT
Trigger: AGTGATGTTGGCCAACATTCAATTTGAACAGAGCAT...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGAGAGCAGGCAATTaGTGTTGTTCACACGGTACA +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNQRAGN*CCSHGT
Trigger: TGTACCGTGTGAACAACAGCAATTGCCTGCTCTCTG...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCTGTCTCTTGGCCCGGTaGTTCCGAGGGTTGTACTTA +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCCLLAR*FRGLYL
Trigger: TAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACA...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACGAAGGAAAGGGCAATaGTTGATTTCTGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILRRKGQ*LISELS
Trigger: GCTCAACTCAGAAATCAAGCATTGCCCTTTCCTTCG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AGTGACCATCAGGAGCCCAATCCAGACTTGTCAGCACCCCTAAGTCCTCCTGTACGAAGGAAAGGGCAATaGTTGATTTCTGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SDHQEPNPDLSAPLSPPVRRKGQ*LISELS
Trigger: GCTCAACTCAGAAATCAAGCATTGCCCTTTCCTTCG...TACAGGAGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp AGTGACCATCAGGAGCCCAATCCAGACTTGTCAGCACCCCTAAGTCCTCCTGTATGGACAGAGCCTGTCTaGATTAGCATCTGTCAGATA +
Preference number: 4 (lower is better)
Translates to: SDHQEPNPDLSAPLSPPVWTEPV*ISICQI
Trigger: TATCTGACAGATGCTAATGCAGACAGGCTCTGTCCA...TACAGGAGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTCCTGATGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTCGCCCTGAAGGGTACTaGTGGGCCCAGTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLRPEGY*WAQWKC
Trigger: ACACTTCCACTGGGCCCAGCAGTACCCTTCAGGGCG...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGCTTGGGCAGAGGGCTaGAGACGTTGGTTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLAWAEG*RRWFRF
Trigger: GAACCGGAACCAACGTCTGCAGCCCTCTGCCCAAGC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCTCCTGCAGAACCAACTaGCCAAACTCCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFSCRTN*PNSSSP
Trigger: CGGGCTGGAGGAGTTTGGGCAGTTGGTTCTGCAGGA...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTTGCCCTGTCCTGACTaGCCCGTCACCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRLPCPD*PVTRLS
Trigger: GCTGAGCCTGGTGACGGGGCAGTCAGGACAGGGCAA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTTGGGCAGCAGCCTCTaGTGCAGCTCCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRLGSSL*CSSHTR
Trigger: CCTGGTGTGGGAGCTGCAGCAGAGGCTGCTGCCCAA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCAGTGTGCTCAGGATGTaGTGCAGCAGCAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFSVLRM*CSSRGT
Trigger: TGTCCCCCTGCTGCTGCAGCACATCCTGAGCACACT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAACTTCCAGAGCTGAGCTaGAATGAGGATGTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKLPELS*NEDVCR
Trigger: ACGGCACACATCCTCATTGCAGCTCAGCTCTGGAAG...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGGCAACTTCGGAAGGTaGCTGAGGCATCAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHGNFGR*LRHQRH
Trigger: GTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCAGTGTGTGTTGGAGGTaGCATCTCCGGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFSVCWR*HLRESS
Trigger: GCTGCTCTCCCGGAGATGGCACCTCCAACACACACT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATGGCAGTGCCCACAGCTaGTCTTTGCCCATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHGSAHS*SLPIGG
Trigger: TCCACCAATGGGCAAAGAGCAGCTGTGGGCACTGCC...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAGGAGCATTCCTTGAGTaGCCAGCCCTGCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPGAFLE*PALQGP
Trigger: GGGTCCTTGCAGGGCTGGGCACTCAAGGAATGCTCC...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGTGCTCCTCCACAGCTaGCACAGCGCTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLVLLHS*HSAHST
Trigger: AGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCAC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTACTCAAATTTCCGGGTaGCGAACCCTTCCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEATQISG*RTLPQF
Trigger: AAACTGCGGAAGGGTTCGGCACCCGGAAATTTGAGT...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACACTAGGATGATGCCATaGCATAGTTCGCTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNTRMMP*HSSLQD
Trigger: ATCCTGCAGCGAACTATGGCATGGCATCATCCTAGT...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACAAATGGCAGCCAGGGTaGGGTCAGATGTATTGTTCA +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNKWQPG*GQMYCS
Trigger: TGAACAATACATCTGACCCCACCCTGGCTGCCATTT...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAAAATATCGTCGCAGGTaGGGGCGACACGCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPKYRRR*GRHAGK
Trigger: CTTGCCGGCGTGTCGCCCCCACCTGCGACGATATTT...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATGGTACTCGTCAAACTaGGCAAATTTGTCCGTCATG +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILWYSSN*ANLSVM
Trigger: CATGACGGACAAATTTGCCCAGTTTGACGAGTACCA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAAGAAACCTCCGCCTaGGACGGTTCTTTTCATTTC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILKETSA*DGSFHF
Trigger: GAAATGAAAAGAACCGTCCCAGGCGGAGGTTTCTTT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGTTGTGGGTTGCTCTTTaGACAGAGCCTGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQLWVAL*TEPVCI
Trigger: AATGCAGACAGGCTCTGTCCAAAGAGCAACCCACAA...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACAGCGGGGGCCCTTGTaGGTTGCTCTTTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPQRGPL*VALWTE
Trigger: CTCTGTCCAAAGAGCAACCCACAAGGGCCCCCGCTG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGTCTTTCCTGGGGGTaGTGGAATCTTGAATATTTT +
Preference number: 4 (lower is better)
Translates to: PNSESTHCPARLPRQAAGCLSWG*WNLEYF
Trigger: AAAATATTCAAGATTCCACCACCCCCAGGAAAGACA...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGACCCCTGTCTTTCCTaGGGGTGGTGGAATCTTGAA +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCDPCLS*GWWNLE
Trigger: TTCAAGATTCCACCACCCCCAGGAAAGACAGGGGTC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGGCCCAGTGGAAGTGTaGATGGTCAGGAAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCGPVEV*MVRKVV
Trigger: TACAACCTTCCTGACCATCCACACTTCCACTGGGCC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGAGGGCTGCAGACGTTaGTTCCGGTTCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWEGCRR*FRFRNC
Trigger: GCAGTTCCTGAACCGGAACCAACGTCTGCAGCCCTC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGCAGCTGCTGGAAGGTaGCCTGGACCAAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFAAAGR*PGPSHR
Trigger: ACGATGACTTGGTCCAGGCCACCTTCCAGCAGCTGC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGCGAGCCCCAGAAAAGTaGAAGAAGACTAATGATGCC +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQRAPEK*KKTNDA
Trigger: GGCATCATTAGTCTTCTTCCACTTTTCTGGGGCTCG...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCTCGATGATCAGGACCTaGGTCTGGCCAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFSMIRT*VWPGCR
Trigger: CCTGCATCCTGGCCAGACCCAGGTCCTGATCATCGA...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGAGAGCAGCGAGGCTTaGTGGCAAAGAGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWESSEA*WQRGES
Trigger: GGACTCACCTCTTTGCCACCAAGCCTCGCTGCTCTC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGAGAGCAGCGAGGCTTaGTGGCAAAGAGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFESSEA*WQRGES
Trigger: GGACTCACCTCTTTGCCACCAAGCCTCGCTGCTCTC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGCTGCCAGAGACAGGCTaGAGCTTTGCTGATTTTTCA +
Preference number: 4 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVLPETG*SFADFS
Trigger: TGAAAAATCAGCAAAGCTCCAGCCTGTCTCTGGCAG...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTCAGCCCAGCTGCCTGTaGCTATTACCTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLQPSCL*LLPAPL
Trigger: CAGAGGGGCAGGTAATAGCCACAGGCAGCTGGGCTG...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCAGAGCTCCTGGGAAGTaGCCAGTCCTAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFRAPGK*PVLAQA
Trigger: AGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAAGCACCAATGTGGCCTaGAGCCTGTGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPSTNVA*SLCCGH
Trigger: GTGGCCACAGCACAGGCTCCAGGCCACATTGGTGCT...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAGCACCAATGTGGCCTaGAGCCTGTGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLSTNVA*SLCCGH
Trigger: GTGGCCACAGCACAGGCTCCAGGCCACATTGGTGCT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCTTCTGGGCTGCATTTaGCCAGGTTCCATAGGATCC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPLLGCI*PGSIGS
Trigger: GGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTAGATGGGTCTGTCCCTaGAGTTTGGGTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEARWVCP*SLGFWS
Trigger: ACTCCAGAAACCCAAACTCCAGGGACAGACCCATCT...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAATTCCCTGCAGGTAGATaGGTCTGTCCCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKFPAGR*VCPWSL
Trigger: CAAACTCCAGGGACAGACCCATCTACCTGCAGGGAA...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGATGCCCGGCCTCCTCTaGGTAGTTCTGAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKMPGLL*VVLRKG
Trigger: CCCTTTTCTCAGAACTACCCAGAGGAGGCCGGGCAT...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAACGGCCTGATTCCCGCTaGTTGTTAAATGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKRPDSR*LLNGDS
Trigger: GGAGTCACCATTTAACAACCAGCGGGAATCAGGCCG...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS-3UTR TCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCTTGGAAAACATCTGTaGGAAAATGGAGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNLGKHL*ENGGSI
Trigger: GATGGAGCCTCCATTTTCTCACAGATGTTTTCCAAG...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGAGGATTCTTTTTCTCTaGCACTGTATCACCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQRILFL*HCITGL
Trigger: AAGGCCGGTGATACAGTGTCAGAGAAAAAGAATCCT...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCTTGAGCCTGGAGCTTaGTGGCAGTCTTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFLEPGA*WQSSGC
Trigger: GCATCCTGAAGACTGCCATCAAGCTCCAGGCTCAAG...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAGGAGCCTGCAGGGCTaGCACAAGAGATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLRSLQG*HKRCQE
Trigger: TTCCTGGCATCTCTTGTGTCAGCCCTGCAGGCTCCT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTCCTGCTCATACAGCGTaGAGAGCCTCAGGTGATCGG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLPAHTA*RASGDR
Trigger: CCGATCACCTGAGGCTCTTCACGCTGTATGAGCAGG...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACACTTCGGAAGGTGCCTaGGGCATCAGCGTCACATGT +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHTSEGA*GISVTC
Trigger: ACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGT...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTTGGTGGCAAAGAGGTaGGTCCAGGGGCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRLVAKR*VQGLVG
Trigger: GCCAACCAGCCCCTGGACTCACCTCTTTGCCACCAA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGTCAGGCAGCAGCCAGTaGTTTGGTACTGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWSGSSQ*FGTGEP
Trigger: AGGCTCACCAGTACCAAATCACTGGCTGCTGCCTGA...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGATCACCATCTGGGCTaGGTGCCACAGAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRDHHLG*VPQRGQ
Trigger: CTGCCCTCTCTGTGGCACTCAGCCCAGATGGTGATC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAACTGCTTTGGCCAAGATaGGAAAGTGACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKLLWPR*ESDHQE
Trigger: CTCCTGATGGTCACTTTCTCATCTTGGCCAAAGCAG...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTTTCCAGGCAGCTCACTaGCCCTTCGCATCGGAACAG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLFQAAH*PFASEQ
Trigger: CTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAA...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGCCTAGGGCCCGCGAGTaGTGCAAGAATTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKPRARE*CKNSKT
Trigger: GGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGG...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCCAACGACCCAAAGTTaGTTCCTGAGCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPPTTQS*FLSCLC
Trigger: ACAGAGACAGCTCAGGAAGCAACTTTGGGTCGTTGG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGCGGACGTTCAGCTGCTaGCTGGCATACAAAGATGCC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWRTFSC*LAYKDA
Trigger: GGCATCTTTGTATGCCAGGCAGCAGCTGAACGTCCG...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCATCACCGACTTCGCATaGTGGAGTCTCTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCITDFA*WSLWRM
Trigger: CATTCTCCAGAGACTCCAGCATGCGAAGTCGGTGAT...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GAGTGTATCATCGGAGAGGAACAAACAAGCAGAGATTCCATCACAGCCACTCACATCACCGACTTCGCATaGTGGAGTCTCTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: ECIIGEEQTSRDSITATHITDFA*WSLWRM
Trigger: CATTCTCCAGAGACTCCAGCATGCGAAGTCGGTGAT...GTGAGTGGCTGTGATGGAATCTCTGCTTGTTTGTTCCTCTCCGATGATACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTAATCTGAATGGAAACTaGCGACTGTGGATCACCGAC +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEANLNGN*RLWITD
Trigger: GTCGGTGATCCACAGTCGGCAGTTTCCATTCAGATT...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACAGCAGGGGCAGGCTGTaGTTCACAGAGAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHSRGRL*FTERFT
Trigger: TGTGAACCTCTCTGTGAAGCACAGCCTGCCCCTGCT...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAAGATGGGAGGCCCCATaGTCTGCAATGAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKRWEAP*SAMNFS
Trigger: ACTGAAGTTCATTGCAGAGCATGGGGCCTCCCATCT...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGCTGCCTCAGGAAGGTaGGAAACACTGCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWAASGR*ETLQRQ
Trigger: CTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCAGC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCTGAGGATTGAAGCCTaGTGCCTCAGGAAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHLRIEA*CLRKVR
Trigger: TCGCACCTTCCTGAGGCAGCAGGCTTCAATCCTCAG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTCCTGTGGCTATTACCTaGCCCTCTGGGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLPVAIT*PSGWKA
Trigger: TGCCTTCCACCCAGAGGGGCAGGTAATAGCCACAGG...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTGCTGCCAGCCCAGCTaGCTGTGGCTATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRCCQPS*LWLLPA
Trigger: GGCAGGTAATAGCCACAGGCAGCTGGGCTGGCAGCA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCGGCCAGGGCGGACACTaGCACATCCAGTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIGQGGH*HIQCLT
Trigger: GGTCAGGCACTGGATGTGGCAGTGTCCGCCCTGGCC...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATACAGGGAAAGTCTTCTaGCTTGTGTGGCCGCGTCAG +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHTGKVF*LVWPRQ
Trigger: CTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGT...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGGGCTCCATGGCAGCTaGACAGTGGCTAATGGGTCC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRGLHGS*TVANGS
Trigger: GGACCCATTAGCCACTGTGCAGCTGCCATGGAGCCC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATAACAGGCCCAGCAGCTaGATACTGGGTCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHNRPSS*ILGLSH
Trigger: ATGGGAGAGACCCAGTATGCAGCTGCTGGGCCTGTT...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGAAGTACACATTGCCCTaGACGTCTCCCACGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWKYTLP*TSPTAS
Trigger: GCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACGCAAGAAAGCAGCAATaGCCAAGATGTTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNARKQQ*PRCYWP
Trigger: TGGCCAATAACATCTTGGCCATTGCTGCTTTCTTGC...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACTTTCCTGGGGGTGGTaGAATCTTGAATATTTTGTC +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILLSWGW*NLEYFV
Trigger: GACAAAATATTCAAGATTCCACCACCCCCAGGAAAG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTACTGCGCCATCCTTGCTaGGAAACAGGAGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVLRHPC*ETGAKG
Trigger: CCCCTTGGCTCCTGTTTCCCAGCAAGGATGGCGCAG...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGACCAAGTCATCGTCTaGGATGGACACTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHDQVIV*DGHWLL
Trigger: GAGCAGCCAGTGTCCATCCCAGACGATGACTTGGTC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCATGCTGGAAGGTGGCCTaGACCAAGTCATCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPCWKVA*TKSSSG
Trigger: CCCAGACGATGACTTGGTCCAGGCCACCTTCCAGCA...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCTAATGATGCCACCTTaGCCCCATCAGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHLMMPP*PHQEPA
Trigger: TGCAGGCTCCTGATGGGGCCAAGGTGGCATCATTAG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGAGCACTCCGTGCAGCTaGTCCACAGTCAAACCACTC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWSTPCS*STVKPL
Trigger: GAGTGGTTTGACTGTGGACCAGCTGCACGGAGTGCT...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCTGTGCAGCCACCACATaGAGGTTGGTAAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPCAATT*RLVRNF
Trigger: GAAGTTCCTTACCAACCTCCATGTGGTGGCTGCACA...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAATGTGCAGCCACCACATaGAGGTTGGTAAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKCAATT*RLVRNF
Trigger: GAAGTTCCTTACCAACCTCCATGTGGTGGCTGCACA...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGCTTTTGTTCCTCTTTaGGGACTGAAGAAGCATAGA +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILAFVPL*GLKKHR
Trigger: TCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGATGCCATAACCGTGTaGCCCCATCTAGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRDAITV*PHLARR
Trigger: CCGTCGGGCTAGATGGGGCCACACGGTTATGGCATC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCTTCCAGATACTGCCATaGAACCATCTGGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCFQILP*NHLVPK
Trigger: CTTGGGCACCAGATGGTTCCATGGCAGTATCTGGAA...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GAGTGTATCATCGGAGAGGAACAAACAAGCAGAGATTCCATCACAGCCACTCACTTCCAGATACTGCCATaGAACCATCTGGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ECIIGEEQTSRDSITATHFQILP*NHLVPK
Trigger: CTTGGGCACCAGATGGTTCCATGGCAGTATCTGGAA...GTGAGTGGCTGTGATGGAATCTCTGCTTGTTTGTTCCTCTCCGATGATACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGCTCCAGATTTCAGATaGAGCATCCCCTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCAPDFR*SIPWLH
Trigger: ATGAAGCCAGGGGATGCTCCATCTGAAATCTGGAGC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGGGTCCATTCTCCTTCTaGGCTGCATTTGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKGPFSF*AAFGQV
Trigger: AACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACC...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
3UTR CAA 72 bp GAATCTTTCTACGCTGCCGTGTCTTTAGATGTGGTGTaGGCTCACTATCCATGCTGGCATCACTATCCATGC +
Preference number: 4 (lower is better)
Translates to: ESFYAAVSLDVV*AHYPCWHHYPC
Trigger: GCATGGATAGTGATGCCAGCATGGATAGTGAGCCAACACCACATCTAAAGACACGGCAGCGTAGAAAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR TCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCTGGGTAGATACATGCTaGTGTAGTTTCTCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCWVDTC*CSFSKG
Trigger: GCCCTTGGAGAAACTACATCAGCATGTATCTACCCA...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCTCAGCTTGCGTCATGTaGGATATCTGTAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCSACVM*DICRLW
Trigger: CCAGAGTCTACAGATATCTCACATGACGCAAGCTGA...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGCTTCCCATTTTCAATaGGTTCCTCCCAGACCGACG +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWASHFQ*VPPRPT
Trigger: CGTCGGTCTGGGAGGAACTCATTGAAAATGGGAAGC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTCCTGCTCCGCCCTCGTaGTCATCATCCCAATCAACA +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLPAPPS*SSSQST
Trigger: TGTTGATTGGGATGATGATCACGAGGGCGGAGCAGG...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACTCAAACTCCTGGACTTaGGCCTGGAGCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHSNSWT*AWSLMA
Trigger: TGCCATCAAGCTCCAGGCTCAAGTCCAGGAGTTTGA...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATGGAAAGTGGATGAAATaGAAAGCCGGATGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHGKWMK*KAGCCA
Trigger: GGCGCAGCATCCGGCTTTTCATTTCATCCACTTTCC...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGGTATCTGCGGCAGGTaGTCCCTTTCTGTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWGICGR*SLSVCL
Trigger: TAAGCAGACAGAAAGGGATCACCTGCCGCAGATACC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTATCAGCCCCATCGATaGTCAGGACCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRYQPHR*SGPGSG
Trigger: GCCAGACCCAGGTCCTGATCATCGATGGGGCTGATA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAGTGAAGAGCCTCAGGTaGTCGGTGACCAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKVKSLR*SVTKRR
Trigger: CCTGCGCTTGGTCACCGATCACCTGAGGCTCTTCAC...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGTGATTTGGTACTGGTaGGCCTTAGTCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFVIWYW*ALVCST
Trigger: GGTGCTGCAGACTAAGGCTCACCAGTACCAAATCAC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAGAAGGGAGCATTCCTTaGGTGCCCAGCCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKEGSIP*VPSPAR
Trigger: CCTTGCAGGGCTGGGCACTCAAGGAATGCTCCCTTC...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAGGAGCCAGAGGGACTaGAGGGAGCATTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLRSQRD*REHSLS
Trigger: ACTCAAGGAATGCTCCCTTCAGTCCCTCTGGCTCCT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGCACATGGAGGGCTGTaGCAGAGCCCGAGTGAATCT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRAHGGL*QSPSES
Trigger: AGATTCACTCGGGCTCTGTCACAGCCCTCCATGTGC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAATCTTTCCCGATGAACTaGAAGGTCTTCCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKSFPMN*KVFHAL
Trigger: CAGAGCATGGAAGACCTTTCAGTTCATCGGGAAAGA...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGCCCTGATGCATGACTaGCTTATTCTCCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWALMHD*LILPPS
Trigger: TGAGGGAGGGAGAATAAGTCAGTCATGCATCAGGGC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGCCCTGATGCATGACTaGCTTATTCTCCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFALMHD*LILPPS
Trigger: TGAGGGAGGGAGAATAAGTCAGTCATGCATCAGGGC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAAAATGCCCTGATGCATaGCTGACTTATTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKKCPDA*LTYSPS
Trigger: GGAGGGAGAATAAGTCAGTCATGCATCAGGGCATTT...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCAAATGCCCTGATGCATaGCTGACTTATTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPKCPDA*LTYSPS
Trigger: GGAGGGAGAATAAGTCAGTCATGCATCAGGGCATTT...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCAACCCGCAGCAGGTTaGACAGGTTCCGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRQPAAG*TGSEAW
Trigger: CCATGCTTCGGAACCTGTGCAACCTGCTGCGGGTTG...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAGGGGCCCTTGTGGGTTaGTCTTTGGACAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVGALVG*SLDRAC
Trigger: ACAGGCTCTGTCCAAAGAGCAACCCACAAGGGCCCC...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGGGGCCCTTGTGGGTTaGTCTTTGGACAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRGALVG*SLDRAC
Trigger: ACAGGCTCTGTCCAAAGAGCAACCCACAAGGGCCCC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCCAATCAACAGCAGTaGATAGTTCAGCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRPNQQQ*IVQRGP
Trigger: GGGCCCCCGCTGAACTATGCACTGCTGTTGATTGGG...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAATTCTGCCTTAAGCACTaGAGTCTTCAGAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKFCLKH*SLQSVT
Trigger: GGTGACACTCTGAAGACTGCAGTGCTTAAGGCAGAA...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATGGAGGCCCCATGCTCTaGAATGAACTTCAGTATCGC +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHGGPML*NELQYR
Trigger: GCGATACTGAAGTTCATTGCAGAGCATGGGGCCTCC...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCAGTCTGAAATCAGCTaGCCATTCTGGTCCACTAAC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPQSEIS*PFWSTN
Trigger: GTTAGTGGACCAGAATGGGCAGCTGATTTCAGACTG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGAGTCTCTCAGACACCTaGTCATACAGCGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKSLSDT*SYSVKS
Trigger: GCTCTTCACGCTGTATGAGCAGGTGTCTGAGAGACT...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGAGTGTGCTCAGGATGTaGTGCAGCAGCAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRSVLRM*CSSRGT
Trigger: TGTCCCCCTGCTGCTGCAGCACATCCTGAGCACACT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGACACTCAGCACTCCGTaGAGCTGGTCCACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWTLSTP*SWSTVK
Trigger: TTTGACTGTGGACCAGCTGCACGGAGTGCTGAGTGT...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGTCCCCGCAGCTCAGTaGCACAGGGAAAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRVPAAQ*HRESLL
Trigger: CAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTTTGATTTCCAGATACTaGCATGGAACCATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEALISRY*HGTIWC
Trigger: GCACCAGATGGTTCCATGGCAGTATCTGGAAATCAA...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR GCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCACAGCCTTAGCTTCCTaGCACAAGATTAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCTALAS*HKISSP
Trigger: TGGGGAACTAATCTTGTGGCAGGAAGCTAAGGCTGT...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCGTGGCCTGGAGCCTGTaGTGTGGCCACAGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIVAWSL*CGHSLS
Trigger: GCTAAGGCTGTGGCCACAGCACAGGCTCCAGGCCAC...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCATCCCCTGGCTTCATaGAAAGTAACTTCAAATCTG +
Preference number: 4 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNHPLAS*KVTSNL
Trigger: CAGATTTGAAGTTACTTTGCATGAAGCCAGGGGATG...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp GGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTGGTATACATGTGTCATCTCCTGATTCCTTTTaGCTCAAGAAAGAAAGAACT +
Preference number: 4 (lower is better)
Translates to: GAQATAVTAAELLGIHVSSPDSF*LKKERT
Trigger: AGTTCTTTCTTTCTTGAGGCAAAAGGAATCAGGAGA...TGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGTCAGAAAGTACACATTaGCCTGCACGTCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWSESTH*PARLPR
Trigger: CCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGA...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAATTGTGGGTTGCTCTTTaGACAGAGCCTGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKLWVAL*TEPVCI
Trigger: AATGCAGACAGGCTCTGTCCAAAGAGCAACCCACAA...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTCCACAGGAACCCTTTaGCCAGCCAGAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRSTGTL*PARDSR
Trigger: CCTGCTGTCTCTGGCTGGCCAAAGGGTTCCTGTGGA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCATCATCCATGCTTTaGCCAAGGAGGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFPSSML*PRRMTL
Trigger: CAGGGTCATCCTCCTTGGCCAAAGCATGGATGATGG...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGCCAGTAAAGCTGTTTaGCCACATTTATCATTCCAT +
Preference number: 4 (lower is better)
Translates to: WQEWHPRVLGPASDARILASKAV*PHLSFH
Trigger: ATGGAATGATAAATGTGGCCAAACAGCTTTACTGGC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCACATGTTCCAGAAGATaGGAGGCCCCATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFTCSRR*EAPCSA
Trigger: TGCAGAGCATGGGGCCTCCCATCTTCTGGAACATGT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGCTTTCCTGGGGGTGGTaGAATCTTGAATATTTTGTC +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQLSWGW*NLEYFV
Trigger: GACAAAATATTCAAGATTCCACCACCCCCAGGAAAG...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAACAGGAAGGTTGTAGCTaGGGGGAATGTATCCATAAC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKQEGCS*GECIHN
Trigger: GTTATGGATACATTCCCCCCAGCTACAACCTTCCTG...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTGAAGGGTACTGCTaGGCCCAGTGGAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRPEGYC*AQWKCG
Trigger: TCCACACTTCCACTGGGCCCAGCAGTACCCTTCAGG...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGAGGGCTGCAGACGTTaGTTCCGGTTCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGREGCRR*FRFRNC
Trigger: GCAGTTCCTGAACCGGAACCAACGTCTGCAGCCCTC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGACCAAGTCATCGTCTaGGATGGACACTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLDQVIV*DGHWLL
Trigger: GAGCAGCCAGTGTCCATCCCAGACGATGACTTGGTC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACAGGCTCAGCCTTCCGTaGGGCAGCATCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENRLSLP*GSISRC
Trigger: GCAACGGCTGATGCTGCCCCACGGAAGGCTGAGCCT...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAGGGACTCAGCAGACTTaGGCAGCAGCCTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKGTQQT*AAASAA
Trigger: TGCAGCAGAGGCTGCTGCCCAAGTCTGCTGAGTCCC...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAAGGAGCCGGGGGTACTaGCTGAGGATTGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKRSRGY*LRIEAC
Trigger: GCAGGCTTCAATCCTCAGCCAGTACCCCCGGCTCCT...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAGCAGCGAGGCTTGGTaGCAAAGAGGTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVSSEAW*QRGESR
Trigger: CCTGGACTCACCTCTTTGCCACCAAGCCTCGCTGCT...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAGCAACAAAGCCATGGTaGGCAGGGAAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKATKPW*AGKAAS
Trigger: GCTGGCTGCCTTCCCTGCCCACCATGGCTTTGTTGC...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAGTGAGCAGGGATGCTaGTCAGCTCCACGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLSEQGC*SAPRLD
Trigger: ATCAAGGCGTGGAGCTGACCAGCATCCCTGCTCACT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAGGAGGGTGTGGGTTTaGCACACCAAGAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLRRVWV*HTKSGC
Trigger: GCATCCACTCTTGGTGTGCCAAACCCACACCCTCCT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTATCAGAGCACCAATGTaGCCTGGAGCCTGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLIRAPM*PGACAV
Trigger: CACAGCACAGGCTCCAGGCCACATTGGTGCTCTGAT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCGGATCCCATCAGAGCTaGCACACAAAAATGAGGACT +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPGSHQS*HTKMRT
Trigger: AGTCCTCATTTTTGTGTGCCAGCTCTGATGGGATCC...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGAGAAGACAGAAGCATaGCCTATCAGCGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKEKTEA*PISGCH
Trigger: ATGACATCCGCTGATAGGCCATGCTTCTGTCTTCTC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGAGAAGACAGAAGCATaGCCTATCAGCGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCEKTEA*PISGCH
Trigger: ATGACATCCGCTGATAGGCCATGCTTCTGTCTTCTC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACCATGGTGGCGGGAACTaGTTCCAACCCGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENHGGGN*FQPAAG
Trigger: ACCTGCTGCGGGTTGGAATCAGTTCCCGCCACCATG...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGCAATGCTTGATTTCTaGGTTGAGCCTCGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWAMLDF*VEPRGH
Trigger: ATGCCCTCGAGGCTCAACTCAGAAATCAAGCATTGC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCTGGTTGTTAAATGGTaGCTCCTCCAGCCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRLVVKW*LLQPLP
Trigger: GGGAAGCGGCTGGAGGAGTCACCATTTAACAACCAG...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGAGAGCTGAGCTGCAATaGGGATGTGTGCCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRRAELQ*GCVPCP
Trigger: AGGACACGGCACACATCCTCATTGCAGCTCAGCTCT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCTTCCTCTTTGGGGACTaGAGAAGCATAGAGGGCATG +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFFLFGD*RSIEGM
Trigger: CATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAA...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGTGATTTGGTACTGGTaGGCCTTAGTCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLVIWYW*ALVCST
Trigger: GGTGCTGCAGACTAAGGCTCACCAGTACCAAATCAC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAGTGGCTAATGGGTCCTaGGTGAGCAGGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKVANGS*VSRDAG
Trigger: ACCAGCATCCCTGCTCACTCAGGACCCATTAGCCAC...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAGCACATGGAGGGCTGTaGCAGAGCCCGAGTGAATCT +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKAHGGL*QSPSES
Trigger: AGATTCACTCGGGCTCTGTCACAGCCCTCCATGTGC...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGTCTTTCCCGATGAACTaGAAGGTCTTCCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKSFPMN*KVFHAL
Trigger: CAGAGCATGGAAGACCTTTCAGTTCATCGGGAAAGA...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGATGCTGCGCCATCCTTaGTGGGAAACAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRMLRHP*WETGAK
Trigger: CTTGGCTCCTGTTTCCCAGCAAGGATGGCGCAGCAT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGTTACCAGCAGCCACTaGTTCTTCCCAGCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHVTSSH*FFPALS
Trigger: ACTAAGAGCTGGGAAGAAGCAGTGGCTGCTGGTAAC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGTTACCAGCAGCCACTaGTTCTTCCCAGCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFVTSSH*FFPALS
Trigger: ACTAAGAGCTGGGAAGAAGCAGTGGCTGCTGGTAAC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCATAGCAACGTTTAGCTaGTGTTCTCAGGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFIATFS*CSQGPI
Trigger: GATGGGCCCCTGAGAACAGCAGCTAAACGTTGCTAT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACAGCACCCGACAACCATaGTGCAGGTCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENSTRQP*CRSQSS
Trigger: GGAGCTCTGGGACCTGCAGCATGGTTGTCGGGTGCT...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTTGAGTGCCCAGCCCTaGAAGGACCCATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRLSAQP*KDPSSA
Trigger: TGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACTCACAGACACCACGTaGTCCTCCACAGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKLTDTT*SSTAAT
Trigger: TGTGGCAGCTGTGGAGGAGCACGTGGTGTCTGTGAG...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATGATATCTGTAGACTCTaGAACAAGGGGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHDICRL*NKGLAD
Trigger: GTCTGCCAGCCCCTTGTTCCAGAGTCTACAGATATC...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTCCTGAGCTGTCTCTGTaGCAGAGATGGATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLPELSL*QRWISG
Trigger: CCCTGAAATCCATCTCTGCCACAGAGACAGCTCAGG...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGAGAATGAGCTCATGGTaGCGGGAACTGATTCCAACC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWRMSSW*RELIPT
Trigger: GGTTGGAATCAGTTCCCGCCACCATGAGCTCATTCT...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGATCAGCTGCCCATTCTaGTCCACTAACCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWISCPF*STNLSA
Trigger: GGCTGATAGGTTAGTGGACCAGAATGGGCAGCTGAT...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCACAGTTCAGGGACTTaGGGTAGGTGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRHSSGT*GRCAGR
Trigger: CCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTG...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGAGTGAGCAGGGATGCTaGTCAGCTCCACGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRSEQGC*SAPRLD
Trigger: ATCAAGGCGTGGAGCTGACCAGCATCCCTGCTCACT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAGGAGGGTGTGGGTTTaGCACACCAAGAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVRRVWV*HTKSGC
Trigger: GCATCCACTCTTGGTGTGCCAAACCCACACCCTCCT...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTGTCCCAGGAGGGTGTaGGTTTGGCACACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRCPRRV*VWHTKS
Trigger: ACTCTTGGTGTGCCAAACCCACACCCTCCTGGGACA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTATGCCATGGAACCATCTaGTGCCCAAGCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVCHGTI*CPSHSS
Trigger: ACTGCTGTGGCTTGGGCACCAGATGGTTCCATGGCA...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTATGCCATACTCCTTGTaGGTGGACAATATCATAGGA +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAMPYSL*VDNIIG
Trigger: TCCTATGATATTGTCCACCCACAAGGAGTATGGCAT...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CCA 90 bp ATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTGTCACCAGCATGCCATACTCCTTGTaGGTGGACAATATCATAGGA +
Preference number: 4 (lower is better)
Translates to: ILGLSHSLTSLSFEAVTSMPYSL*VDNIIG
Trigger: TCCTATGATATTGTCCACCCACAAGGAGTATGGCAT...GCTGGTGACAGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555727.5
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGAACTCCAGGATCCTTaGGCTGCAGGACAAATATGC +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHELQDP*AAGQIC
Trigger: GCATATTTGTCCTGCAGCCCAAGGATCCTGGAGTTC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAGGTCCATTCTCCTTCTaGGCTGCATTTGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPGPFSF*AAFGQV
Trigger: AACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACC...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACAGATGGGTCTGTCCCTaGAGTTTGGGTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHRWVCP*SLGFWS
Trigger: ACTCCAGAAACCCAAACTCCAGGGACAGACCCATCT...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCAGATGGGTCTGTCCCTaGAGTTTGGGTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFRWVCP*SLGFWS
Trigger: ACTCCAGAAACCCAAACTCCAGGGACAGACCCATCT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGATCATTATTCCCGAGTaGCACATCTTCATTCCCAAT +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQIIIPE*HIFIPN
Trigger: ATTGGGAATGAAGATGTGCCACTCGGGAATAATGAT...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCTCTCATTCCTCCTCCTaGCAAGAATGGCATCCTAGG +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFSHSSS*QEWHPR
Trigger: CCTAGGATGCCATTCTTGCCAGGAGGAGGAATGAGA...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACCGCTTTCAATGGCTTaGCTCCTCACCTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPPLSMA*LLTSHL
Trigger: CAGATGAGAGGTGAGGAGCCAAGCCATTGAAAGCGG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACTTGTTCCGCTTTCAATaGCTTGGCTCCTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHLFRFQ*LGSSPL
Trigger: GAGAGGTGAGGAGCCAAGCCATTGAAAGCGGAACAA...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCCCTTCAAGTGGGCCTaGCCAACAAGACTGAATCTA +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHPFKWA*PTRLNL
Trigger: TAGATTCAGTCTTGTTGGCCAGGCCCACTTGAAGGG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGAGTTTTTCCATGGCTaGAACTCAGCTTGTATATGC +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCEFFHG*NSACIC
Trigger: GCATATACAAGCTGAGTTTCAGCCATGGAAAAACTC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTTCAGTAGGCTCTGGATaGGATTCAGAGTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLSVGSG*DSESPE
Trigger: CTCTGGAGACTCTGAATCTCATCCAGAGCCTACTGA...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGGGATTCAAATCTGTTaGCAGGTATTGTACCCTTCT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKGIQIC*QVLYPS
Trigger: AGAAGGGTACAATACCTGTCAACAGATTTGAATCCC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCTATCAGCCCCATCGATaGTCAGGACCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIYQPHR*SGPGSG
Trigger: GCCAGACCCAGGTCCTGATCATCGATGGGGCTGATA...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACTTTGGGATCCAGTCTaGAATCAGCTGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPLWDPV*NQLPIL
Trigger: CAGAATGGGCAGCTGATTTCAGACTGGATCCCAAAG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCCCTGCTCATACAGCGTaGAGAGCCTCAGGTGATCGG +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIPAHTA*RASGDR
Trigger: CCGATCACCTGAGGCTCTTCACGCTGTATGAGCAGG...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTCAAACCACTCCGTGTaGCTTCTAGGGCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRSNHSV*LLGQSR
Trigger: CCTTGACTGCCCTAGAAGTCACACGGAGTGGTTTGA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTCATGTCTTCCAGAGCTaGGCTGCAATGAGGATGTGT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLHVFQS*AAMRMC
Trigger: ACACATCCTCATTGCAGCTCAGCTCTGGAAGACATG...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAAGGAGCCAGAGGGACTaGAGGGAGCATTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKRSQRD*REHSLS
Trigger: ACTCAAGGAATGCTCCCTTCAGTCCCTCTGGCTCCT...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACCTAATGGGTCCTGAGTaGGCAGGGATGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENLMGPE*AGMLVS
Trigger: GCTGACCAGCATCCCTGCTCACTCAGGACCCATTAG...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGCCAAGATGAGAAAGTaGCCATCAGGAGCCCAATCC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRAKMRK*PSGAQS
Trigger: GGATTGGGCTCCTGATGGTCACTTTCTCATCTTGGC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACTGCTTTGGCCAAGATaGGAAAGTGACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPLLWPR*ESDHQE
Trigger: CTCCTGATGGTCACTTTCTCATCTTGGCCAAAGCAG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGATTCAGGTTTGGCTTaGGTTATCGATATTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKDSGLA*VIDIRV
Trigger: GACCCTAATATCGATAACTCAAGCCAAACCTGAATC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTATGCTCTGTTCAAATTaGATGTTGGCCAACATCACT +
Preference number: 4 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAMLCSN*MLANIT
Trigger: AGTGATGTTGGCCAACATTCAATTTGAACAGAGCAT...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCTCTTTCCCGATGAACTaGAAGGTCTTCCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFSFPMN*KVFHAL
Trigger: CAGAGCATGGAAGACCTTTCAGTTCATCGGGAAAGA...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAGCCCTGATGCATGACTaGCTTATTCTCCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVALMHD*LILPPS
Trigger: TGAGGGAGGGAGAATAAGTCAGTCATGCATCAGGGC...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCAGTAAGACACTTTCGTaGTCTCTTCTGAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCSKTLS*SLLRMP
Trigger: TGGCATTCTCAGAAGAGATCACGAAAGTGTCTTACT...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACTGAGGTCAGGAGTTTaGGACCCACCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKLRSGV*DPPGQH
Trigger: ATGTTGGCCAGGTGGGTCTCAAACTCCTGACCTCAG...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTACACAGGTATCCTCATTaGCATCCGAAGCTGCTGACG +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVHRYPH*HPKLLT
Trigger: CGTCAGCAGCTTCGGATGGCAATGAGGATACCTGTG...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAGGATTGAAGCCTGCTaGCTCAGGAAGGTGCGAAAC +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVRIEAC*LRKVRN
Trigger: GTTTCGCACCTTCCTGAGGCAGCAGGCTTCAATCCT...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACCCCACAGCTGCTCTTTaGCCATTGGTGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENPTAAL*PLVEKA
Trigger: GGCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGG...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAACCACACCTGAACCTTaGCATCCTCTCCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKTTPEP*HPLQPS
Trigger: TGACGGCTGGAGAGGATGGCAAGGTTCAGGTGTGGT...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATCAAGGACCCATCTTCTaGACCACTCACCAATACCTT +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHQGPIF*TTHQYL
Trigger: AAGGTATTGGTGAGTGGTGCAGAAGATGGGTCCTTG...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCAAGGACCCATCTTCTaGACCACTCACCAATACCTT +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFQGPIF*TTHQYL
Trigger: AAGGTATTGGTGAGTGGTGCAGAAGATGGGTCCTTG...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCATGCCATAGTTCGCTaGAGGATTTCTGGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHHAIVR*RISGKD
Trigger: ATCCTTGCCAGAAATCCTGCAGCGAACTATGGCATG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCATGGTCAGTAGGCTCTaGATGAGATTCAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFMVSRL*MRFRVS
Trigger: GGAGACTCTGAATCTCATCCAGAGCCTACTGACCAT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACTGGCCAAGATGTTATTaGCCACATTCCGGACGTTCA +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHWPRCY*PHSGRS
Trigger: TGAACGTCCGGAATGTGGCCAATAACATCTTGGCCA...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACAAGGCAGCTGGACAATaGCACAGAAATATCGTCGCA +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHKAAGQ*HRNIVA
Trigger: TGCGACGATATTTCTGTGCCATTGTCCAGCTGCCTT...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAGGAAACTGCCGACTGTaGATCACCGACTTCGCATGC +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKGNCRL*ITDFAC
Trigger: GCATGCGAAGTCGGTGATCCACAGTCGGCAGTTTCC...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGAGAGTGTCACATCATTaGGATTCAAATCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQRVSHH*DSNLLT
Trigger: TGTCAACAGATTTGAATCCCAATGATGTGACACTCT...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGCAGGAAGGTTGTAGCTaGGGGGAATGTATCCATAAC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWQEGCS*GECIHN
Trigger: GTTATGGATACATTCCCCCCAGCTACAACCTTCCTG...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCATCAGGACCTGGGTCTaGCCAGGATGCAGGGACTCA +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIIRTWV*PGCRDS
Trigger: TGAGTCCCTGCATCCTGGCCAGACCCAGGTCCTGAT...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTATCAGCTGCCCATTCTaGTCCACTAACCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLISCPF*STNLSA
Trigger: GGCTGATAGGTTAGTGGACCAGAATGGGCAGCTGAT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATCTGCCAGAGACAGGCTaGAGCTTTGCTGATTTTTCA +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHLPETG*SFADFS
Trigger: TGAAAAATCAGCAAAGCTCCAGCCTGTCTCTGGCAG...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCCACCCGATCACCATCTaGGCTGAGTGCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIHPITI*AECHRE
Trigger: CTCTCTGTGGCACTCAGCCCAGATGGTGATCGGGTG...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATGGCTGCAGAACTCCTTaGTATACATGTGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHGCRTP*YTCVIC
Trigger: GCAGATGACACATGTATACCAAGGAGTTCTGCAGCC...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGAACTCCAGGATCCTTaGGCTGCAGGACAAATATGC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLELQDP*AAGQIC
Trigger: GCATATTTGTCCTGCAGCCCAAGGATCCTGGAGTTC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATGGATCCCATCAGAGCTaGCACACAAAAATGAGGACT +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHGSHQS*HTKMRT
Trigger: AGTCCTCATTTTTGTGTGCCAGCTCTGATGGGATCC...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGCCCGCCGCCACACCTaGCTAACTTTTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHARRHT*LTFCIF
Trigger: AAAAATACAAAAAGTTAGCCAGGTGTGGCGGCGGGC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCTGGAAACCAGGGCATTaGATAGAAATAAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPWKPGH*IEIKSL
Trigger: GAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGTTCATGTTTACTTCTaGGACCAGAGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFVHVYF*DQSRAQ
Trigger: CTGTGCTCTACTCTGGTCTCAGAAGTAAACATGAAC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGTTCTCTGCTCTTCTCTaGGAAACCCTATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWFSALL*ETLCTL
Trigger: CAAGGTACATAGGGTTTCTCAGAGAAGAGCAGAGAA...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACCAGCTTCTTCAGGGTaGACCTTGGAGGATTCTTTT +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPPASSG*TLEDSF
Trigger: AAAAGAATCCTCCAAGGTTCACCCTGAAGAAGCTGG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACCTTGAGCCTGGAGCTTaGTGGCAGTCTTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENLEPGA*WQSSGC
Trigger: GCATCCTGAAGACTGCCATCAAGCTCCAGGCTCAAG...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGGGGTGGTGGAATCTTaGATATTTTGTCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWGVVES*IFCPFG
Trigger: GCCAAATGGACAAAATATTCAAGATTCCACCACCCC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGTCTCGGAAAGTGGATaGAATGAAAAGCCGGATGCT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLVSESG*NEKPDA
Trigger: AGCATCCGGCTTTTCATTTCATCCACTTTCCGAGAC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACACTGTGAAATCCTCTaGGGCAGAAGCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKHCEIL*GRSQEL
Trigger: GAGCTCTTGGCTTCTGCCTCAGAGGATTTCACAGTG...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAATGCCTCCATCAGTGCTaGAACTACAGCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKCLHQC*NYSSSQ
Trigger: CTGTGAGCTGCTGTAGTTTCAGCACTGATGGAGGCA...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGCTGGCACACAAAAATaGGGACTCAGATTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFAGTQK*GLRFRF
Trigger: AAACCTGAATCTGAGTCCTCATTTTTGTGTGCCAGC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTTGTTCTAAATCCACATaGGAACACAGGCAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLCSKST*EHRQAY
Trigger: GTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACA...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCATGGTCTTGATCTCCTaGCCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIMVLIS*PRDLPT
Trigger: GGTGGGCAGATCACGAGGTCAGGAGATCAAGACCAT...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCTGGACAGAGCCTGTCTaGATTAGCATCTGTCAGATA +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFWTEPV*ISICQI
Trigger: TATCTGACAGATGCTAATGCAGACAGGCTCTGTCCA...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATTTCCGCAGTTTCACTTaGCACTCGCTGATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHFRSFT*HSLIFS
Trigger: TGAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAA...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGACTCAAATTTCCGGGTaGCGAACCCTTCCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRTQISG*RTLPQF
Trigger: AAACTGCGGAAGGGTTCGGCACCCGGAAATTTGAGT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGCATCCCCTGGCTTCATaGAAAGTAACTTCAAATCTG +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKHPLAS*KVTSNL
Trigger: CAGATTTGAAGTTACTTTGCATGAAGCCAGGGGATG...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAGTGTCTTCAGGCTTTaGATCTCTAGCACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLSVFRL*ISSTRG
Trigger: ACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACATGCCATAGTTCGCTaGAGGATTTCTGGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPHAIVR*RISGKD
Trigger: ATCCTTGCCAGAAATCCTGCAGCGAACTATGGCATG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGCAGACACATGCCCATaGAGTTTTTCCATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLADTCP*SFSMAE
Trigger: TTCAGCCATGGAAAAACTCCATGGGCATGTGTCTGC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAACATCTGTGAGAAAATaGAGGCTCCATCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPTSVRK*RLHPWR
Trigger: TCTCCAGGGATGGAGCCTCCATTTTCTCACAGATGT...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGCATCAATGGCATCATaGGCGTTAAGAAATCTGAAT +
Preference number: 4 (lower is better)
Translates to: PRVLGPASDARILKPSFKASMAS*ALRNLN
Trigger: ATTCAGATTTCTTAACGCCCATGATGCCATTGATGC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCATCATCCATGCTTTaGCCAAGGAGGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKPSSML*PRRMTL
Trigger: CAGGGTCATCCTCCTTGGCCAAAGCATGGATGATGG...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCTGTCTTTCCTGGGGGTaGTGGAATCTTGAATATTTT +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPCLSWG*WNLEYF
Trigger: AAAATATTCAAGATTCCACCACCCCCAGGAAAGACA...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAGCAGCAGTCGCATCTaGTTGTTAAATGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLSSSRI*LLNGDS
Trigger: GGAGTCACCATTTAACAACCAGATGCGACTGCTGCT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGGCTGCAGAACTCCTTaGTATACATGTGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLGCRTP*YTCVIC
Trigger: GCAGATGACACATGTATACCAAGGAGTTCTGCAGCC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp AGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGACTCAGATTCAGGTTTaGCTTGAGTTATCGATATTA +
Preference number: 4 (lower is better)
Translates to: SHHWSRISVGYLWSRHSQTQIQV*LELSIL
Trigger: TAATATCGATAACTCAAGCCAAACCTGAATCTGAGT...CTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACTTCTGGGCTGCATTTaGCCAGGTTCCATAGGATCC +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKLLGCI*PGSIGS
Trigger: GGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAG...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGGTATATTTCGAGGCTTaGCATGAGGCACATAAGAGA +
Preference number: 4 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKVYFEA*HEAHKR
Trigger: TCTCTTATGTGCCTCATGCCAAGCCTCGAAATATAC...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGTCTCGGAAAGTGGATaGAATGAAAAGCCGGATGCT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRVSESG*NEKPDA
Trigger: AGCATCCGGCTTTTCATTTCATCCACTTTCCGAGAC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR TCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCGCCAAGATGAGAAAGTaGCCATCAGGAGCCCAATCC +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIAKMRK*PSGAQS
Trigger: GGATTGGGCTCCTGATGGTCACTTTCTCATCTTGGC...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGAAATGCCCTGATGCATaGCTGACTTATTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRKCPDA*LTYSPS
Trigger: GGAGGGAGAATAAGTCAGTCATGCATCAGGGCATTT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAAAGGGCTGTCTCTGTaGCAGAAACATAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLKGLSL*QKHSSF
Trigger: GAAAGAGCTATGTTTCTGTCACAGAGACAGCCCTTT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCTGCCAATTACCATATTaGCTAAAGTTGAAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPCQLPY*LKLKVV
Trigger: CACGACTTTCAACTTTAGTCAATATGGTAATTGGCA...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAATTCCGGACGTTCAGCTaGTGCCTGGCATACAAAGAT +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKFRTFS*CLAYKD
Trigger: ATCTTTGTATGCCAGGCAGCAGCTGAACGTCCGGAA...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCATTCTCCCTCTTGAGCTaGTCATACAACACAGGTATC +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPFSLLS*SYNTGI
Trigger: GATACCTGTGTTGTATGAGCAGCTCAAGAGGGAGAA...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCATGGACAGAGCCTGTCTaGATTAGCATCTGTCAGATA +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPWTEPV*ISICQI
Trigger: TATCTGACAGATGCTAATGCAGACAGGCTCTGTCCA...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTTCTGCCTTAAGCACTaGAGTCTTCAGAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRFCLKH*SLQSVT
Trigger: GGTGACACTCTGAAGACTGCAGTGCTTAAGGCAGAA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCGCTTCCTTAGGAACCTaGCAGAGCCGTACAGAACCA +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIASLGT*QSRTEP
Trigger: TGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGC...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCATTGATTTCCAGATACTaGCATGGAACCATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPLISRY*HGTIWC
Trigger: GCACCAGATGGTTCCATGGCAGTATCTGGAAATCAA...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGAGTGTCTTCAGGCTTTaGATCTCTAGCACAAGGGGT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRSVFRL*ISSTRG
Trigger: ACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCAAGCAAAGGCTAACCTaGTCAATAGATTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPKQRLT*SIDSSI
Trigger: TATGGAAGAATCTATTGAGCAGGTTAGCCTTTGCTT...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGAGAGTAAAACTCAGTaGCCTTTAACTCCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLESKTQ*PLTPQV
Trigger: GACTTGGGGAGTTAAAGGGCACTGAGTTTTACTCTC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGACTAGGATGATGCCATaGCATAGTTCGCTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRTRMMP*HSSLQD
Trigger: ATCCTGCAGCGAACTATGGCATGGCATCATCCTAGT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACACCGACTTCGCATGCTaGAGTCTCTGGAGAATGAGC +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENTDFAC*SLWRMS
Trigger: GCTCATTCTCCAGAGACTCCAGCATGCGAAGTCGGT...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAATATTACCTGCCCCTCTaGGTGGAAGGCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKYYLPL*VEGNTV
Trigger: AACTGTGTTGCCTTCCACCCAGAGGGGCAGGTAATA...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCACAGAGCCATCACTaGAGCAGGATATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKPQSHH*SRISVG
Trigger: ACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGG...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATATGCCATACTCCTTGTaGGTGGACAATATCATAGGA +
Preference number: 4 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHMPYSL*VDNIIG
Trigger: TCCTATGATATTGTCCACCCACAAGGAGTATGGCAT...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAATCTCATTCCTCCTCCTaGCAAGAATGGCATCCTAGG +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKSHSSS*QEWHPR
Trigger: CCTAGGATGCCATTCTTGCCAGGAGGAGGAATGAGA...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCCTTTCTTCTCTTCTaGATCAAACCAACGACCCAA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRPFLLF*IKPTTQ
Trigger: TTGGGTCGTTGGTTTGATTCAGAAGAGAAGAAAGGG...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTTATACATGTGTCATCTaGTTCCTTAGGAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLYTCVI*FLRNLP
Trigger: TGGCAGGTTCCTAAGGAAGCAGATGACACATGTATA...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTTGATTTCCAGATACTaGCATGGAACCATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRLISRY*HGTIWC
Trigger: GCACCAGATGGTTCCATGGCAGTATCTGGAAATCAA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTTCCGCAGTTTCACTTaGCACTCGCTGATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRFRSFT*HSLIFS
Trigger: TGAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR GCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAATTGGCTCACTATCCATaGTGGCATCACTATCCATGC +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKLAHYP*WHHYPC
Trigger: GCATGGATAGTGATGCCAGCATGGATAGTGAGCCAA...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTACATATTTCCACTGTCTaGCCTTGTGTACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVHISTV*PCVLSA
Trigger: AGCTGAGAGTACACAAGGCCAGACAGTGGAAATATG...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCAGATTTCCAGGCATCTaGCACAGAGCTGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIRFPGI*HRAEEA
Trigger: AGCTTCCTCAGCTCTGTGCCAGATGCCTGGAAATCT...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCAAGTCCTTGAATTCTTaGCCACAGAAGACATTTCCT +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFKSLNS*PQKTFP
Trigger: AGGAAATGTCTTCTGTGGCCAAGAATTCAAGGACTT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCCCCTTCAAGTGGGCCTaGCCAACAAGACTGAATCTA +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIPFKWA*PTRLNL
Trigger: TAGATTCAGTCTTGTTGGCCAGGCCCACTTGAAGGG...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACTGTTCAAATGTCCTATaGTCTCACAATCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHCSNVL*SHNPVV
Trigger: AACCACTGGATTGTGAGACCATAGGACATTTGAACA...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCTACACAGTTTCTAAATaGTTACTCTCAACTTCCGTA +
Preference number: 4 (lower is better)
Translates to: GLANKTESIEPIGQVSLCYTVSK*LLSTSV
Trigger: TACGGAAGTTGAGAGTAACCATTTAGAAACTGTGTA...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGATTCAGGTTTGGCTTaGGTTATCGATATTAGGGTC +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRDSGLA*VIDIRV
Trigger: GACCCTAATATCGATAACTCAAGCCAAACCTGAATC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAAAAGGGCTGTCTCTGTaGCAGAAACATAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKKGLSL*QKHSSF
Trigger: GAAAGAGCTATGTTTCTGTCACAGAGACAGCCCTTT...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACAATCTGAATGGAAACTaGCGACTGTGGATCACCGAC +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENNLNGN*RLWITD
Trigger: GTCGGTGATCCACAGTCGGCAGTTTCCATTCAGATT...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTATACATGTGTCATCTaGTTCCTTAGGAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRYTCVI*FLRNLP
Trigger: TGGCAGGTTCCTAAGGAAGCAGATGACACATGTATA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR GCA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGTCTCCTGATTCCTTTTaGCTCAAGAAAGAAAGAACT +
Preference number: 4 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWSPDSF*LKKERT
Trigger: AGTTCTTTCTTTCTTGAGGCAAAAGGAATCAGGAGA...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCTTGTACTTAGCCAGCTaGTACTCGTCAAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGILYLAS*YSSNWA
Trigger: TGCCCAGTTTGACGAGTACCAGCTGGCTAAGTACAA...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCCAACAAAGAGGCACTTaGAATTCACACGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIQQRGT*NSHAAS
Trigger: ACTGGCAGCGTGTGAATTCCAAGTGCCTCTTTGTTG...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGCTTTTGTTCCTCTTTaGGGACTGAAGAAGCATAGA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRAFVPL*GLKKHR
Trigger: TCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAATCATTATTCCCGAGTaGCACATCTTCATTCCCAAT +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPIIIPE*HIFIPN
Trigger: ATTGGGAATGAAGATGTGCCACTCGGGAATAATGAT...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTATCATTATTCCCGAGTaGCACATCTTCATTCCCAAT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLIIIPE*HIFIPN
Trigger: ATTGGGAATGAAGATGTGCCACTCGGGAATAATGAT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGAGTCGTGTCAGAAGTTaGGAAAACCAGAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRSRVRS*ENQKVC
Trigger: ACAAACCTTCTGGTTTTCCCAACTTCTGACACGACT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACATCCTCTGGTCAGGATaGAAACCAGGGCATTGGATA +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENILWSG*KPGHWI
Trigger: TATCCAATGCCCTGGTTTCCATCCTGACCAGAGGAT...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGTATATTTCGAGGCTTaGCATGAGGCACATAAGAGA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRVYFEA*HEAHKR
Trigger: TCTCTTATGTGCCTCATGCCAAGCCTCGAAATATAC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTTTTCGTGATCTCTTCTaGGAATGCCAATTACCATAT +
Preference number: 4 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLFRDLF*ECQLPY
Trigger: ATATGGTAATTGGCATTCTCAGAAGAGATCACGAAA...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACTCTCCTACAAGTCCTTaGATTCTTGGCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENSPTSP*ILGHRR
Trigger: TCTTCTGTGGCCAAGAATTCAAGGACTTGTAGGAGA...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR GCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACCCTGGCATACAAAGATaGCTTGAGGATAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENPGIQR*LEDKLR
Trigger: CCTGAGTTTATCCTCAAGGCATCTTTGTATGCCAGG...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAAATAAAGTTCTTTTATaGGCCGGGCACAATGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKNKVLL*AGHNGS
Trigger: TGAGCCATTGTGCCCGGCCCATAAAAGAACTTTATT...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCTACACAGTTTCTAAATaGTTACTCTCAACTTCCGTA +
Preference number: 4 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFYTVSK*LLSTSV
Trigger: TACGGAAGTTGAGAGTAACCATTTAGAAACTGTGTA...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACGGGATTCAAATCTGTTaGCAGGTATTGTACCCTTCT +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENGIQIC*QVLYPS
Trigger: AGAAGGGTACAATACCTGTCAACAGATTTGAATCCC...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR TCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCGATTCAGGTTTGGCTTaGGTTATCGATATTAGGGTC +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIDSGLA*VIDIRV
Trigger: GACCCTAATATCGATAACTCAAGCCAAACCTGAATC...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR TCA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAATGCTCTGTTCAAATTaGATGTTGGCCAACATCACT +
Preference number: 4 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKMLCSN*MLANIT
Trigger: AGTGATGTTGGCCAACATTCAATTTGAACAGAGCAT...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACATGCCATACTCCTTGTaGGTGGACAATATCATAGGA +
Preference number: 4 (lower is better)
Translates to: MPITILTKVESRVRSWENMPYSL*VDNIIG
Trigger: TCCTATGATATTGTCCACCCACAAGGAGTATGGCAT...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAACTCAGATTCAGGTTTaGCTTGAGTTATCGATATTA +
Preference number: 4 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPTQIQV*LELSIL
Trigger: TAATATCGATAACTCAAGCCAAACCTGAATCTGAGT...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGAGCAGATTCAGGTTTaGCTTGAGTTATCGATATTA +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGREQIQV*LELSIL
Trigger: TAATATCGATAACTCAAGCCAAACCTGAATCTGCTC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR GCA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAACTTTGAGTACCTCTaGTCTAGATTTCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVNFEYL*SRFQKQ
Trigger: CTGTTTTTGAAATCTAGAGCAGAGGTACTCAAAGTT...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR GCA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGAACTTTGAGTACCTCTaGTCTAGATTTCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRNFEYL*SRFQKQ
Trigger: CTGTTTTTGAAATCTAGAGCAGAGGTACTCAAAGTT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CCA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCTGTCTTTCCTGGGGGTaGTGGAATCTTGAATATTTT +
Preference number: 4 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGICLSWG*WNLEYF
Trigger: AAAATATTCAAGATTCCACCACCCCCAGGAAAGACA...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS CCA 90 bp AGCCGGGCCCGAGCAGAGGCCTCCAGAGGCCCCAAGGCCAGCACGTaGGCACCCTGGCTCTGCTCAAGGGTCTCCCCTAGGCCTGCATCA +
Preference number: 5 (lower is better)
Translates to: SRARAEASRGPKAST*APWLCSRVSPRPAS
Trigger: TGATGCAGGCCTAGGGGAGACCCTTGAGCAGAGCCAGGGTGCCCACGTGCTGGCCTTGGGGCCTCTGGAGGCCTCTGCTCGGGCCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 90 bp GAGGCCTCCAGAGGCCCCAAGGCCAGCACGTGGGCACCCTGGCTCTaGTCAAGGGTCTCCCCTAGGCCTGCATCACTAGACACACTCAGC +
Preference number: 5 (lower is better)
Translates to: EASRGPKASTWAPWL*SRVSPRPASLDTLS
Trigger: GCTGAGTGTGTCTAGTGATGCAGGCCTAGGGGAGACCCTTGAGCAGAGCCAGGGTGCCCACGTGCTGGCCTTGGGGCCTCTGGAGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp GGCGTGGCCGGGCAGGACTCGGTGGCTTCTGCAGCTGCTGGAAGGTaGCCTGGACCAAGTCATCGTCTGGGATGGACACTGGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: GVAGQDSVASAAAGR*PGPSHRLGWTLAAP
Trigger: TGGAGCAGCCAGTGTCCATCCCAGACGATGACTTGGTCCAGGCCACCTTCCAGCAGCTGCAGAAGCCACCGAGTCCTGCCCGGCCACGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp TCCGTGGGGCAGCATCAGCCGTTGCACTGTGTCCTGAAGAAGGCGTaGCCGGGCAGGACTCGGTGGCTTCTGCAGCTGCTGGAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: SVGQHQPLHCVLKKA*PGRTRWLLQLLEGG
Trigger: GCCACCTTCCAGCAGCTGCAGAAGCCACCGAGTCCTGCCCGGCCACGCCTTCTTCAGGACACAGTGCAACGGCTGATGCTGCCCCACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp CGAGCAGAGGCCTCCAGAGGCCCCAAGGCCAGCACGTGGGCACCCTaGCTCTGCTCAAGGGTCTCCCCTAGGCCTGCATCACTAGACACA +
Preference number: 5 (lower is better)
Translates to: RAEASRGPKASTWAP*LCSRVSPRPASLDT
Trigger: TGTGTCTAGTGATGCAGGCCTAGGGGAGACCCTTGAGCAGAGCCAGGGTGCCCACGTGCTGGCCTTGGGGCCTCTGGAGGCCTCTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 90 bp ATCCCTGGAGAGCGGGGTGGCCGGCGGGGGTGTCTCTTGGCCCGGTaGTTCCGAGGGTTGTACTTAGCCAGCTGGTACTCGTCAAACTGG +
Preference number: 5 (lower is better)
Translates to: IPGERGGRRGCLLAR*FRGLYLASWYSSNW
Trigger: CCAGTTTGACGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCCGGCCACCCCGCTCTCCAGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS GCA 90 bp CTGACTGGAGAGCGGGGTGGCCGGCGGGGGTGTCTCTTGGCCCGGTaGTTCCGAGGGTTGTACTTAGCCAGCTGGTACTCGTCAAACTGG +
Preference number: 5 (lower is better)
Translates to: LTGERGGRRGCLLAR*FRGLYLASWYSSNW
Trigger: CCAGTTTGACGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCCGGCCACCCCGCTCTCCAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557627.1
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGCCAGGAAGGCTGTCTaGCCCTGTCCTGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCARKAV*PCPDCP
Trigger: GGGGCAGTCAGGACAGGGCAAGACAGCCTTCCTGGC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS GCA 90 bp GCTGACACAAGAGATGCCAGGAAGGCTGTCTTGCCCTGTCCTGACTaGCCCGTCACCAGGCTCAGCCTTCCGTGGGGCAGCATCAGCCGT +
Preference number: 5 (lower is better)
Translates to: ADTRDARKAVLPCPD*PVTRLSLPWGSISR
Trigger: ACGGCTGATGCTGCCCCACGGAAGGCTGAGCCTGGTGACGGGGCAGTCAGGACAGGGCAAGACAGCCTTCCTGGCATCTCTTGTGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp GAGCTGAGCTGCGCAGACTCTGGACGAGGCAGGCAAACGGGCCCATaGGGTAGGGGTCTCCACTGTTACCAGCAGCCACTGCTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: ELSCADSGRGRQTGP*GRGLHCYQQPLLLP
Trigger: GGGAAGAAGCAGTGGCTGCTGGTAACAGTGGAGACCCCTACCCCATGGGCCCGTTTGCCTGCCTCGTCCAGAGTCTGCGCAGCTCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCCAGGAGCCAAGGGGCTaGGAGTGTCCTCTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: CTSPTASCRVELAPSQGSQEPRG*ECPLPV
Trigger: CACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCTG...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACCCACTCACCAATACCTaGGGGCTTAGCCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHPLTNT*GLSQAR
Trigger: CCTGGCCTGGCTAAGCCCCAAGGTATTGGTGAGTGG...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCCCACTCACCAATACCTaGGGGCTTAGCCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPPLTNT*GLSQAR
Trigger: CCTGGCCTGGCTAAGCCCCAAGGTATTGGTGAGTGG...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS GCA 90 bp GTGACTTCTAGGGCAGTCAAGGCCTGGGGAAGGACATCAGGCCCGTaGTCCTTCTCCAGTGTGCTCAGGATGTGCTGCAGCAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: VTSRAVKAWGRTSGP*SFSSVLRMCCSSRG
Trigger: CCCCCTGCTGCTGCAGCACATCCTGAGCACACTGGAGAAGGAGCACGGGCCTGATGTCCTTCCCCAGGCCTTGACTGCCCTAGAAGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp CCGGATGCTGCGCCATCCTTGCTGGGAAACAGGAGCCAAGGGGCTTaGAGTGTCCTCTTCCAGTGGCCGGAGAGACTGGACCCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PDAAPSLLGNRSQGA*SVLFQWPERLDPCL
Trigger: AAGACAGGGGTCCAGTCTCTCCGGCCACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCTGTTTCCCAGCAAGGATGGCGCAGCATCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp CCTTCTCCAGTGTGCTCAGGATGTGCTGCAGCAGCAGGGGGACAGTaGCAGGCAGGGTCCGGAGTCTCTCAGACACCTGCTCATACAGCG +
Preference number: 5 (lower is better)
Translates to: PSPVCSGCAAAAGGQ*QAGSGVSQTPAHTA
Trigger: CGCTGTATGAGCAGGTGTCTGAGAGACTCCGGACCCTGCCTGCCACTGTCCCCCTGCTGCTGCAGCACATCCTGAGCACACTGGAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS-3UTR CAA 90 bp GGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGGTCCACAGGAACCCTTaGGCCAGCCAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: GKVFCLVWPRQQLPWPQLVHRNP*ASQRQQ
Trigger: CTGCTGTCTCTGGCTGGCCAAAGGGTTCCTGTGGAC...CAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCGATGCTGCGCCATCCTaGCTGGGAAACAGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPDAAPS*LGNRSQ
Trigger: TTGGCTCCTGTTTCCCAGCAAGGATGGCGCAGCATC...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGCCAGGAAGGCTGTCTaGCCCTGTCCTGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: KYTLPCTSPTASCRVELAARKAV*PCPDCP
Trigger: GGGGCAGTCAGGACAGGGCAAGACAGCCTTCCTGGC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACACTAATGATGCCACCTaGGCCCCATCAGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHTNDAT*APSGAC
Trigger: GCAGGCTCCTGATGGGGCCAAGGTGGCATCATTAGT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCGCTGCTCTTTGCCCATaGGTGGAGAAGGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: CTSPTASCRVELAPSQGSAALCP*VEKATA
Trigger: TGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGC...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp GGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCCCACTCACCAATACCTaGGGGCTTAGCCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GKSSALCGRVSSCLGHSCPLTNT*GLSQAR
Trigger: CCTGGCCTGGCTAAGCCCCAAGGTATTGGTGAGTGG...GCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PQGKSSALCGRVSSCLGHGKSSA*CGRVSS
Trigger: GCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC...GTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp GTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VPAAQCHRESLLPCVAASGKSSA*CGRVSS
Trigger: GCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC...TGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGAGGAGCCAGAGGGACTaGGGGCTTAGCCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LHSCHSAHSTLMTQELTKRSQRD*GLSQAR
Trigger: CCTGGCCTGGCTAAGCCCCAAGTCCCTCTGGCTCCT...CTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471684.2
CDS-3UTR CAA 90 bp GTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCACACCCGATCACCATCTaGCCATCCTCTCCAGCCGTC +
Preference number: 5 (lower is better)
Translates to: VPAAQCHRESLLPCVAASHPITI*PSSPAV
Trigger: GACGGCTGGAGAGGATGGCAAGATGGTGATCGGGTG...TGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556488.5
CDS TCA 90 bp AGGCAGGTCTCCCAGAGCCTCAGGAGGGCAACTTCGGAAGGTGCCTaGGGCATCAGCGTCACATGTCTTCCAGAGCTGAGCTGCGCAGAC +
Preference number: 5 (lower is better)
Translates to: RQVSQSLRRATSEGA*GISVTCLPELSCAD
Trigger: GTCTGCGCAGCTCAGCTCTGGAAGACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCCCTCCTGAGGCTCTGGGAGACCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS GCA 90 bp AACCTATCAGCCCCATCGATGATCAGGACCTGGGTCTGGCCAGGATaGAGGGACTCAGCAGACTTGGGCAGCAGCCTCTGCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NLSAPSMIRTWVWPG*RDSADLGSSLCCSS
Trigger: GGAGCTGCAGCAGAGGCTGCTGCCCAAGTCTGCTGAGTCCCTGCATCCTGGCCAGACCCAGGTCCTGATCATCGATGGGGCTGATAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 90 bp GGTAAGGCAGGTCTCCCAGAGCCTCAGGAGGGCAACTTCGGAAGGTaGCTGAGGCATCAGCGTCACATGTCTTCCAGAGCTGAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: GKAGLPEPQEGNFGR*LRHQRHMSSRAELR
Trigger: GCGCAGCTCAGCTCTGGAAGACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCCCTCCTGAGGCTCTGGGAGACCTGCCTTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS CCA 90 bp CTAGCAAACTGCGCAGACTCTGGACGAGGCAGGCAAACGGGCCCATaGGGTAGGGGTCTCCACTGTTACCAGCAGCCACTGCTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LANCADSGRGRQTGP*GRGLHCYQQPLLLP
Trigger: GGGAAGAAGCAGTGGCTGCTGGTAACAGTGGAGACCCCTACCCCATGGGCCCGTTTGCCTGCCTCGTCCAGAGTCTGCGCAGTTTGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000556935.5
CDS CCA 90 bp GAAGCCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTaGAATCTGGACAGGAGCCAGAGGGACTTGGGGCTTAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: EAKSSWEVASPSTGF*NLDRSQRDLGLSQA
Trigger: GGCCTGGCTAAGCCCCAAGTCCCTCTGGCTCCTGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471684.2
CDS-3UTR CAA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAAGTAACCCAGCAGGGCTaGAACGTGCTGGGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKVTQQG*NVLGRL
Trigger: AAGCCTGCCCAGCACGTTCAAGCCCTGCTGGGTTAC...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGGGGGGCCCTTGTGGGTaGCTCTTTGGACAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPGGPCG*LFGQSL
Trigger: CAGGCTCTGTCCAAAGAGCAACCCACAAGGGCCCCC...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGATGCTGCGCCATCCTaGCTGGGAAACAGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCDAAPS*LGNRSQ
Trigger: TTGGCTCCTGTTTCCCAGCAAGGATGGCGCAGCATC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp TCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAGAGGGCTGCAGACGTaGGTTCCGGTTCAGGAACTG +
Preference number: 5 (lower is better)
Translates to: SSALCGRVSSCLGHSCTVRGLQT*VPVQEL
Trigger: CAGTTCCTGAACCGGAACCAACGTCTGCAGCCCTCT...CACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGAAGTAGATGAGAGCTaGGGCAGAGGGCTGCAGACG +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCEVDES*GRGLQT
Trigger: CGTCTGCAGCCCTCTGCCCAAGCTCTCATCTACTTC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp GGTCCAGGCACAGCCAGTGACCCAGTCACGGTGACAGGCAGGGAAGGAGTGGATGAAGTAGATGAGAGCTaGGGCAGAGGGCTGCAGACG +
Preference number: 5 (lower is better)
Translates to: GPGTASDPVTVTGREGVDEVDES*GRGLQT
Trigger: CGTCTGCAGCCCTCTGCCCAAGCTCTCATCTACTTC...ATCCACTCCTTCCCTGCCTGTCACCGTGACTGGGTCACTGGCTGTGCCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCAGCTGCTCTTTGCCCATaGGTGGAGAAGGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPAALCP*VEKATA
Trigger: TGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGC...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGGCCCACAGCTGCTCTTaGCCCATTGGTGGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRAHSCS*PIGGEG
Trigger: GCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGC...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAAGCCCACAGCTGCTCTTaGCCCATTGGTGGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKAHSCS*PIGGEG
Trigger: GCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGC...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCCCACAGCTGCTCTTaGCCCATTGGTGGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: RESLLPCVAASAAALATAAHSCS*PIGGEG
Trigger: GCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGC...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGTCCTTGGTGACTTaGAGCCCATCCACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: CTSPTASCRVELAPSQGSRSLVT*SPSTWK
Trigger: CTTCCAGGTGGATGGGCTCAAAGTCACCAAGGACCT...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp GATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGGTGCCCCCAGGTCCTaGGTGACTTTGAGCCCATCC +
Preference number: 5 (lower is better)
Translates to: DAGQLHALMVPHFQGPIPGAPRS*VTLSPS
Trigger: GGATGGGCTCAAAGTCACCAAGGACCTGGGGGCACC...CGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAACCACTCACCAATACCTaGGGGCTTAGCCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKPLTNT*GLSQAR
Trigger: CCTGGCCTGGCTAAGCCCCAAGGTATTGGTGAGTGG...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RESLLPCVAASAAALATAGKSSA*CGRVSS
Trigger: GCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp ACAGGGGTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCGGTCAGCTCCACGCCTaGATGGTCCCACACTTTCAA +
Preference number: 5 (lower is better)
Translates to: TGVLGVLTSQQRRLRSRPGQLHA*MVPHFQ
Trigger: TTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACC...GGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAACCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCCAGGAGGGTGTGGGTTaGGCACACCAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCQEGVG*AHQEWM
Trigger: CATCCACTCTTGGTGTGCCAAACCCACACCCTCCTG...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACGAGCCCAATCCAGACTaGTCAGCACCCCTAAGTCCT +
Preference number: 5 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHEPNPD*SAPLSP
Trigger: AGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTC...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCGAGCCCAATCCAGACTaGTCAGCACCCCTAAGTCCT +
Preference number: 5 (lower is better)
Translates to: PRSSVPQGKSSALCGRVSEPNPD*SAPLSP
Trigger: AGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTC...GCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS TCA 90 bp GAGTGTCACCTCCACACAGCACGACGTCCACCTGCTCCGCCCTCGTaGTCATCATCCCAATCAACAGCAGTGCATAGTTCAGCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: ECHLHTARRPPAPPS*SSSQSTAVHSSAGA
Trigger: GGCCCCCGCTGAACTATGCACTGCTGTTGATTGGGATGATGATCACGAGGGCGGAGCAGGTGGACGTCGTGCTGTGTGGAGGTGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS TCA 90 bp GAGCCTCAGGTGATCGGTGACCAAGCGCAGGTAGAGCGGCCGGCCTaGTTCCCGCTTCACCAGCAGCAGTCGCATCTGGTTGTTAAATGG +
Preference number: 5 (lower is better)
Translates to: EPQVIGDQAQVERPA*FPLHQQQSHLVVKW
Trigger: CCATTTAACAACCAGATGCGACTGCTGCTGGTGAAGCGGGAATCAGGCCGGCCGCTCTACCTGCGCTTGGTCACCGATCACCTGAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp TGGTCCACTAACCTATCAGCCCCATCGATGATCAGGACCTGGGTCTaGCCAGGATGCAGGGACTCAGCAGACTTGGGCAGCAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: WSTNLSAPSMIRTWV*PGCRDSADLGSSLC
Trigger: GCAGAGGCTGCTGCCCAAGTCTGCTGAGTCCCTGCATCCTGGCCAGACCCAGGTCCTGATCATCGATGGGGCTGATAGGTTAGTGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCTGGCTGAAACTCAGCTaGTATATGCCTGGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCWLKLS*YMPGAS
Trigger: GGACGCCCCAGGCATATACAAGCTGAGTTTCAGCCA...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp ACGGCTGCAGAACTCCTTGGTATACATGTGTCATCTGCTTCCTTAGGAACCTGCCGGCGGGGGTGTCTCTaGGCCCGGTGCTTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: TAAELLGIHVSSASLGTCRRGCL*ARCFRG
Trigger: CCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCCG...GCAGGTTCCTAAGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp TGCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCTCCCAGACCGACGCTTaGTTCCCCCGTAGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: CLRKVRNTATSASGSFCSSQTDA*FPRRLS
Trigger: GCTGAGCCTACGGGGGAACAAAGCGTCGGTCTGGGA...GGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CCATCCGCTCGATATCCAACAGCCACCCGATCACCATCTGGGCTGAGTGCCACAGTTCAGCGGGGGCCCTaGTGGGTTGCTCTTTGGACA +
Preference number: 5 (lower is better)
Translates to: PSARYPTATRSPSGLSATVQRGP*WVALWT
Trigger: TGTCCAAAGAGCAACCCACAAGGGCCCCCGCTGAAC...TGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGAGAGGGCTGCAGACGTaGGTTCCGGTTCAGGAACTG +
Preference number: 5 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRRGLQT*VPVQEL
Trigger: CAGTTCCTGAACCGGAACCAACGTCTGCAGCCCTCT...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCGGTCAGCTCCACGCCTaGATGGTCCCACACTTTCAA +
Preference number: 5 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSGQLHA*MVPHFQ
Trigger: TTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACC...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS TCA 90 bp AGGCAGGTCTCCCAGAGCCTCAGGAGGGCAACTTCGGAAGGTGCCTaGGGCATCAGCGTCACATGTCTTCCAGAGCTGAGCTGCAATGAG +
Preference number: 5 (lower is better)
Translates to: RQVSQSLRRATSEGA*GISVTCLPELSCNE
Trigger: CTCATTGCAGCTCAGCTCTGGAAGACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCCCTCCTGAGGCTCTGGGAGACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000556935.5
CDS GCA 90 bp AGAGCTTGGGCAGAGGGCTGCAGACGTTGGTTCCGGTTCAGGAACTaGATCACCTCCATCTCTGTCACAGAGCGCCCTGAAGGGTACTGC +
Preference number: 5 (lower is better)
Translates to: RAWAEGCRRWFRFRN*ITSISVTERPEGYC
Trigger: GCAGTACCCTTCAGGGCGCTCTGTGACAGAGATGGAGGTGATGCAGTTCCTGAACCGGAACCAACGTCTGCAGCCCTCTGCCCAAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 90 bp GGTAAGGCAGGTCTCCCAGAGCCTCAGGAGGGCAACTTCGGAAGGTaGCTGAGGCATCAGCGTCACATGTCTTCCAGAGCTGAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: GKAGLPEPQEGNFGR*LRHQRHMSSRAELQ
Trigger: TTGCAGCTCAGCTCTGGAAGACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCCCTCCTGAGGCTCTGGGAGACCTGCCTTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000556935.5
CDS GCA 90 bp AAGACTGCCCTGCACCATATGCCCATGAGCTCTACCCAGCTCCCCTaGATTTCTCTGACTCCCTTTGCTCCTGGTGTGGGACTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: KTALHHMPMSSTQLP*ISLTPFAPGVGLPS
Trigger: GCTGGGGAGTCCCACACCAGGAGCAAAGGGAGTCAGAGAAATGCAGGGGAGCTGGGTAGAGCTCATGGGCATATGGTGCAGGGCAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557627.1
CDS CCA 90 bp GGTAAAGCTCAGCCACCTGGATCCAGTCAGAAGGCAGCTGGACAATaGCACAGAAATATCGTCGCAGGTGGGGGCGACACGCCGGCAAGA +
Preference number: 5 (lower is better)
Translates to: GKAQPPGSSQKAAGQ*HRNIVAGGGDTPAR
Trigger: TCTTGCCGGCGTGTCGCCCCCACCTGCGACGATATTTCTGTGCCATTGTCCAGCTGCCTTCTGACTGGATCCAGGTGGCTGAGCTTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CCA 90 bp TCCACAGTCAAACCACTCCGTGTGACTTCTAGGGCAGTCAAGGCCTaGGGAAGGACATCAGGCCCGTGCTCCTTCTCCAGTGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: STVKPLRVTSRAVKA*GRTSGPCSFSSVLR
Trigger: CCTGAGCACACTGGAGAAGGAGCACGGGCCTGATGTCCTTCCCCAGGCCTTGACTGCCCTAGAAGTCACACGGAGTGGTTTGACTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS-3UTR CAA 90 bp GGTGCCCAAGCCACAGCAGTGACGGCTGCAGAACTCCTTGGTATACATGTGTCAGCTGAGCCCTCCAACTaGGAGGCTCAGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GAQATAVTAAELLGIHVSAEPSN*EAQRAG
Trigger: GCCTGCTCTCTGAGCCTCCAAGTTGGAGGGCTCAGC...TGACACATGTATACCAAGGAGTTCTGCAGCCGTCACTGCTGTGGCTTGGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCAACCCGCAGCAGGTaGCACAGGTTCCGAAGCATG +
Preference number: 5 (lower is better)
Translates to: QGCWSAPRLDGPTLSRSHPTRSR*HRFRSM
Trigger: CATGCTTCGGAACCTGTGCAACCTGCTGCGGGTTGG...ATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCATCAAACTCCTGGACTaGAGCCTGGAGCTTGATGGC +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCIKLLD*SLELDG
Trigger: GCCATCAAGCTCCAGGCTCAAGTCCAGGAGTTTGAT...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTTCCATCATCCATGCTTaGGCCAAGGAGGATGACCCT +
Preference number: 5 (lower is better)
Translates to: KHTVASSRQSGLRQQPVISIIHA*AKEDDP
Trigger: AGGGTCATCCTCCTTGGCCAAAGCATGGATGATGGA...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAAGGCACACTTCCAGTaGTCTGTTCCTACGGGTCTC +
Preference number: 5 (lower is better)
Translates to: PQGKSSALCGRVSSCLGHKAHFQ*SVPTGL
Trigger: GAGACCCGTAGGAACAGACAACTGGAAGTGTGCCTT...GTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACACCGGGGAAGCTTCTTaGGGATCCAGTCTGAAATCA +
Preference number: 5 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHTGEAS*GSSLKS
Trigger: TGATTTCAGACTGGATCCCAAAGAAGCTTCCCCGGT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGACAGGCTGGAGCTTaGCTGATTTTTCATGGTCCG +
Preference number: 5 (lower is better)
Translates to: PRSSVPQGKSSALCGRVSRQAGA*LIFHGP
Trigger: CGGACCATGAAAAATCAGCAAAGCTCCAGCCTGTCT...GCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGCTGCTCTTTGCCCATaGGTGGAGAAGGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: KYTLPCTSPTASCRVELAAALCP*VEKATA
Trigger: TGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp TGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCAGGTCCTTGGTGACTTaGAGCCCATCCACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: CHSAHSTLMTQELTKPLSRSLVT*SPSTWK
Trigger: CTTCCAGGTGGATGGGCTCAAAGTCACCAAGGACCT...GGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PNSESTHCPARLPRQAAGGKSSA*CGRVSS
Trigger: GCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCATCAAAACAGGGGTTTaGGGTGTCCTCACGTCCCAG +
Preference number: 5 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSIKTGV*GVLTSQ
Trigger: CTGGGACGTGAGGACACCCAAAACCCCTGTTTTGAT...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CGTGCTCCTCCACAGCTGCCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGGTCAGCTCCACGCCTaGATGGTCCCACACTTTCAA +
Preference number: 5 (lower is better)
Translates to: RAPPQLPQRSQHSDDPGTGQLHA*MVPHFQ
Trigger: TTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACC...AGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGGCAGCTGTGGAGGAGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp TGGGTTTGGCACACCAAGAGTGGATGCCATAACCGTGTGGCCCCATCTAGCCCGCAGGAGGGTGTGGGTTaGGCACACCAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: WVWHTKSGCHNRVAPSSPQEGVG*AHQEWM
Trigger: CATCCACTCTTGGTGTGCCAAACCCACACCCTCCTG...CGGGCTAGATGGGGCCACACGGTTATGGCATCCACTCTTGGTGTGCCAAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGGAGCCCAATCCAGACTaGTCAGCACCCCTAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNREPNPD*SAPLSP
Trigger: AGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTC...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp GCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCAGTCTGTCCCTGGAGTTaGGGTTTCTGGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: ATGKVFCLVWPRQQLPWPVCPWS*GFWSVC
Trigger: GCAAACACTCCAGAAACCCAAACTCCAGGGACAGAC...TGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp GTTTTGGGTGTCCTCACGTCCCAGCAGAGGAGACTCCGATCCCGGCCCCCGGTGTCTTTAGATGTGGTGTaGGCTCACTATCCATGCTGG +
Preference number: 5 (lower is better)
Translates to: VLGVLTSQQRRLRSRPPVSLDVV*AHYPCW
Trigger: CCAGCATGGATAGTGAGCCAACACCACATCTAAAGA...CACCGGGGGCCGGGATCGGAGTCTCCTCTGCTGGGACGTGAGGACACCCAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCTTCAGAAAGTACACATaGCCCTGCACGTCTCCCACG +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCFRKYT*PCTSPT
Trigger: CGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAA...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCCCTGATTCCCGCTGGTaGTTAAATGGTGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCPDSRW*LNGDSS
Trigger: GGAGGAGTCACCATTTAACAACCAGCGGGAATCAGG...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS TCA 90 bp GCAGCAGGTCCCGCTCCCCATGCATGTCTCGGAAAGTGGATGAAATaGAAAGCCGGATGCTGCGCCATCCTTGCTGGGAAACAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: AAGPAPHACLGKWMK*KAGCCAILAGKQEP
Trigger: TGGCTCCTGTTTCCCAGCAAGGATGGCGCAGCATCCGGCTTTTCATTTCATCCACTTTCCGAGACATGCATGGGGAGCGGGACCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS TCA 90 bp CCTCAGCAGCAGGTCCCGCTCCCCATGCATGTCTCGGAAAGTGGATaGAATGAAAAGCCGGATGCTGCGCCATCCTTGCTGGGAAACAGG +
Preference number: 5 (lower is better)
Translates to: PQQQVPLPMHVSESG*NEKPDAAPSLLGNR
Trigger: CCTGTTTCCCAGCAAGGATGGCGCAGCATCCGGCTTTTCATTTCATCCACTTTCCGAGACATGCATGGGGAGCGGGACCTGCTGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 90 bp GTTCAGCGGGGGCCCTTGTGGGTTGCTCTTTGGACAGAGCCTGTCTaGATTAGCATCTGTCAGATAGACCAAGACAGTGCGGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: VQRGPLWVALWTEPV*ISICQIDQDSAAWQ
Trigger: CTGCCAGGCCGCACTGTCTTGGTCTATCTGACAGATGCTAATGCAGACAGGCTCTGTCCAAAGAGCAACCCACAAGGGCCCCCGCTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp AATATCGTCGCAGGTGGGGGCGACACGCCGGCAAGAAAGCAGCAATaGCCAAGATGTTATTGGCCACATTCCGGACGTTCAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: NIVAGGGDTPARKQQ*PRCYWPHSGRSAAA
Trigger: GGCAGCAGCTGAACGTCCGGAATGTGGCCAATAACATCTTGGCCATTGCTGCTTTCTTGCCGGCGTGTCGCCCCCACCTGCGACGATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CCA 90 bp CGGTGCTTCCGAGGGTTGTACTTAGCCAGCTGGTACTCGTCAAACTaGGCAAATTTGTCCGTCATGGCAGTACGGAGACAGGCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RCFRGLYLASWYSSN*ANLSVMAVRRQAGR
Trigger: CCTGCCCGCCTGTCTCCGTACTGCCATGACGGACAAATTTGCCCAGTTTGACGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000557627.1
CDS CCA 90 bp AGCCACCCGATCACCATCTTGCCATCCTCTCCAGCCGTCAGTAACTaGCAACCCGCATGCAGGAAAAGCGCAGCAGCAACAAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: SHPITILPSSPAVSN*QPACRKSAAATKPW
Trigger: CCATGGCTTTGTTGCTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAGAGGATGGCAAGATGGTGATCGGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556488.5
CDS-3UTR CAA 90 bp GGAAGGCAACACAGTTCAGGGACTTGGGGTAGGTGTGCTGGAAGGCCAGCTGCCACCAACGACCCAAAGTaGCTTCCTGAGCTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GRQHSSGTWGRCAGRPAATNDPK*LPELSL
Trigger: CAGAGACAGCTCAGGAAGCAACTTTGGGTCGTTGGT...GGCAGCTGGCCTTCCAGCACACCTACCCCAAGTCCCTGAACTGTGTTGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTATGGCCAAGATGTTATaGGCCACATTCCGGACGTTC +
Preference number: 5 (lower is better)
Translates to: KHTVASSRQSGLRQQPVIMAKML*ATFRTF
Trigger: GAACGTCCGGAATGTGGCCAATAACATCTTGGCCAT...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp GTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTCTCAGCTTCTCCCTCTaGAGCTGCTCATACAACACA +
Preference number: 5 (lower is better)
Translates to: VFCLVWPRQQLPWPQLHCLSFSL*SCSYNT
Trigger: TGTGTTGTATGAGCAGCTCAAGAGGGAGAAGCTGAG...ACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGGGGGCCCTTGTGGGTaGCTCTTTGGACAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: WQEWHPRVLGPASDARILGGPCG*LFGQSL
Trigger: CAGGCTCTGTCCAAAGAGCAACCCACAAGGGCCCCC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCAACAAAGAGGCACTaGGAATTCACACGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRPTKRH*EFTRCQ
Trigger: CTGGCAGCGTGTGAATTCCAAGTGCCTCTTTGTTGG...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp TGCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCACTAATGATGCCACCTaGGCCCCATCAGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: CLRKVRNTATSASGSFCSTNDAT*APSGAC
Trigger: GCAGGCTCCTGATGGGGCCAAGGTGGCATCATTAGT...GGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp ATCTGCTTCCTTAGGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ICFLRNLPEPYRTILRGGGKSSA*CGRVSS
Trigger: GCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC...ACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGGGTCAGCTCCACGCCTaGATGGTCCCACACTTTCAA +
Preference number: 5 (lower is better)
Translates to: KYTLPCTSPTASCRVELAGQLHA*MVPHFQ
Trigger: TTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACC...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCTCTTTAGATGTGGTGTaGGCTCACTATCCATGCTGG +
Preference number: 5 (lower is better)
Translates to: CTSPTASCRVELAPSQGSSLDVV*AHYPCW
Trigger: CCAGCATGGATAGTGAGCCAACACCACATCTAAAGA...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp TTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGTTCAGAAAGTACACATaGCCCTGCACGTCTCCCACG +
Preference number: 5 (lower is better)
Translates to: LAPSQGSRQLTDPSHRNRFRKYT*PCTSPT
Trigger: CGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAA...CCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTGGCTGGGCGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS CCA 90 bp GGGGGCGACACGCCGGCAAGAAAGCAGCAATGGCCAAGATGTTATTaGCCACATTCCGGACGTTCAGCTGCTGCCTGGCATACAAAGATG +
Preference number: 5 (lower is better)
Translates to: GGDTPARKQQWPRCY*PHSGRSAAAWHTKM
Trigger: CATCTTTGTATGCCAGGCAGCAGCTGAACGTCCGGAATGTGGCCAATAACATCTTGGCCATTGCTGCTTTCTTGCCGGCGTGTCGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CCA 90 bp GGGTGTCTCTTGGCCCGGTGCTTCCGAGGGTTGTACTTAGCCAGCTaGTACTCGTCAAACTGGGCAAATTTGTCCGTCATGGCAGTACGG +
Preference number: 5 (lower is better)
Translates to: GCLLARCFRGLYLAS*YSSNWANLSVMAVR
Trigger: CCGTACTGCCATGACGGACAAATTTGCCCAGTTTGACGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000557627.1
CDS CCA 90 bp ATCACCGACTTCGCATGCTGGAGTCTCTGGAGAATGAGCTCATGGTaGCGGGAACTGATTCCAACCCGCAGCAGGTTGCACAGGTTCCGA +
Preference number: 5 (lower is better)
Translates to: ITDFACWSLWRMSSW*RELIPTRSRLHRFR
Trigger: TCGGAACCTGTGCAACCTGCTGCGGGTTGGAATCAGTTCCCGCCACCATGAGCTCATTCTCCAGAGACTCCAGCATGCGAAGTCGGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp TGGATCACCGACTTCGCATGCTGGAGTCTCTGGAGAATGAGCTCATaGTGGCGGGAACTGATTCCAACCCGCAGCAGGTTGCACAGGTTC +
Preference number: 5 (lower is better)
Translates to: WITDFACWSLWRMSS*WRELIPTRSRLHRF
Trigger: GAACCTGTGCAACCTGCTGCGGGTTGGAATCAGTTCCCGCCACCATGAGCTCATTCTCCAGAGACTCCAGCATGCGAAGTCGGTGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp CCTGTCTGCATTAGCATCTGTCAGATAGACCAAGACAGTGCGGCCTaGCAGCAGGGGCAGGCTGTGCTTCACAGAGAGGTTCACAGCTGT +
Preference number: 5 (lower is better)
Translates to: PVCISICQIDQDSAA*QQGQAVLHREVHSC
Trigger: ACAGCTGTGAACCTCTCTGTGAAGCACAGCCTGCCCCTGCTGCCAGGCCGCACTGTCTTGGTCTATCTGACAGATGCTAATGCAGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS-3UTR CAA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCAGAGAGCAGGCAATaGCTGTTGTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKSESRQ*LLFTRY
Trigger: GTACCGTGTGAACAACAGCAATTGCCTGCTCTCTGA...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACGCATACAAAGATGCCTaGAGGATAAACTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PQGKSSALCGRVSSCLGHAYKDA*RINSGS
Trigger: GGAGCCTGAGTTTATCCTCAAGGCATCTTTGTATGC...GTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp GCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAATCCAGGAAAGGGCAATGCTaGATTTCTGAGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: ALCGRVSSCLGHSCTVKSRKGQC*ISELSL
Trigger: GAGGCTCAACTCAGAAATCAAGCATTGCCCTTTCCT...GGATTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGTTCAGCGGGGGCCCTaGTGGGTTGCTCTTTGGACA +
Preference number: 5 (lower is better)
Translates to: WQEWHPRVLGPASDARILVQRGP*WVALWT
Trigger: TGTCCAAAGAGCAACCCACAAGGGCCCCCGCTGAAC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAACAGGAGCCAAGGGGCTaGGAGTGTCCTCTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SGLHLARFHRIPSELAHKQEPRG*ECPLPV
Trigger: CACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCTG...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTACCGGGGAAGCTTCTTaGGGATCCAGTCTGAAATCA +
Preference number: 5 (lower is better)
Translates to: RESLLPCVAASAAALATATGEAS*GSSLKS
Trigger: TGATTTCAGACTGGATCCCAAAGAAGCTTCCCCGGT...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCCACCACATGGAGGTaGGTAAGGAACTTCGAAAGA +
Preference number: 5 (lower is better)
Translates to: HRESLLPCVAASAAALATATTWR*VRNFER
Trigger: TCTTTCGAAGTTCCTTACCAACCTCCATGTGGTGGC...TGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp AGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTAGACAGGCTGGAGCTTaGCTGATTTTTCATGGTCCG +
Preference number: 5 (lower is better)
Translates to: RESLLPCVAASAAALATARQAGA*LIFHGP
Trigger: CGGACCATGAAAAATCAGCAAAGCTCCAGCCTGTCT...AGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp AGCAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCAAAACAGGGGTTTaGGGTGTCCTCACGTCCCAG +
Preference number: 5 (lower is better)
Translates to: SRDAGQLHALMVPHFQGPIKTGV*GVLTSQ
Trigger: CTGGGACGTGAGGACACCCAAAACCCCTGTTTTGAT...GGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CCACAGCGCTCACAGCACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGATCAGTAGGTTATCTTaGGTCCAGGCACAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PQRSQHSDDPGTDQAAVLISRLS*VQAQPV
Trigger: CACTGGCTGTGCCTGGACCAAAGATAACCTACTGAT...CAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTGCTGTGAGCGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGCCTTCTGGGCTGCATTaGGCCAGGTTCCATAGGATC +
Preference number: 5 (lower is better)
Translates to: PNSESTHCPARLPRQAAGPSGLH*ARFHRI
Trigger: GATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGG...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCTCTTTAGATGTGGTGTaGGCTCACTATCCATGCTGG +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCSLDVV*AHYPCW
Trigger: CCAGCATGGATAGTGAGCCAACACCACATCTAAAGA...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS CCA 90 bp CAGTCAGAAGGCAGCTGGACAATGGCACAGAAATATCGTCGCAGGTaGGGGCGACACGCCGGCAAGAAAGCAGCAATGGCCAAGATGTTA +
Preference number: 5 (lower is better)
Translates to: QSEGSWTMAQKYRRR*GRHAGKKAAMAKML
Trigger: TAACATCTTGGCCATTGCTGCTTTCTTGCCGGCGTGTCGCCCCCACCTGCGACGATATTTCTGTGCCATTGTCCAGCTGCCTTCTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS-3UTR CAA 90 bp TCTGGGCTGCATTTGGCCAGGTTCCATAGGATCCCATCAGAGCTGGCACACAAACGGTGCTTCCGAGGGTaGTACTTAGCCAGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SGLHLARFHRIPSELAHKRCFRG*YLASWY
Trigger: GTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCG...TTTGTGTGCCAGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGGACAACACAGGTATCCTCATaGCCATCCGAAGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: PRAPGKWPVLAQASGIWTTQVSS*PSEAAD
Trigger: GTCAGCAGCTTCGGATGGCAATGAGGATACCTGTGT...TGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp GAAGCCAAGAGCTCCTGGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTGTTCCACTGTCTGGCCTaGTGTACTCTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EAKSSWEVASPSTGFWNLFHCLA*CTLSFS
Trigger: GGAGAAGCTGAGAGTACACAAGGCCAGACAGTGGAA...CAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCCAGGAGCTCTTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGCTTGTGGGTTGCTCTTaGGACAGAGCCTGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PNSESTHCPARLPRQAAGLVGCS*DRACLH
Trigger: ATGCAGACAGGCTCTGTCCAAAGAGCAACCCACAAG...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTCCATCATCCATGCTTaGGCCAAGGAGGATGACCCT +
Preference number: 5 (lower is better)
Translates to: PNSESTHCPARLPRQAAGSIIHA*AKEDDP
Trigger: AGGGTCATCCTCCTTGGCCAAAGCATGGATGATGGA...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCAACAAAGAGGCACTaGGAATTCACACGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QGCWSAPRLDGPTLSRSHPTKRH*EFTRCQ
Trigger: CTGGCAGCGTGTGAATTCCAAGTGCCTCTTTGTTGG...ATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp TGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCGAGAGTGTCACATCATaGGGATTCAAATCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: CTSPTASCRVELAPSQGSESVTS*GFKSVD
Trigger: GTCAACAGATTTGAATCCCAATGATGTGACACTCTC...GGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp GTCCCCGCAGCTCAGTGCCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGGGGGTGGTGGAATCTaGAATATTTTGTCCATTTGG +
Preference number: 5 (lower is better)
Translates to: VPAAQCHRESLLPCVAASGGGGI*NILSIW
Trigger: CCAAATGGACAAAATATTCAAGATTCCACCACCCCC...TGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGGCACTGAGCTGCGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CATCCTCTCCAGCCGTCAGTAACTGGCAACCCGCATGCAGGAAAAGCGCAGCAGAGCAGTCGCATCTGGTaGTTAAATGGTGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: HPLQPSVTGNPHAGKAQQSSRIW*LNGDSS
Trigger: GGAGGAGTCACCATTTAACAACCAGATGCGACTGCT...CTGCTGCGCTTTTCCTGCATGCGGGTTGCCAGTTACTGACGGCTGGAGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CCATCCGCTCGATATCCAACAGCCACCCGATCACCATCTGGGCTGAGTGCCACAGCCACCACATGGAGGTaGGTAAGGAACTTCGAAAGA +
Preference number: 5 (lower is better)
Translates to: PSARYPTATRSPSGLSATATTWR*VRNFER
Trigger: TCTTTCGAAGTTCCTTACCAACCTCCATGTGGTGGC...TGTGGCACTCAGCCCAGATGGTGATCGGGTGGCTGTTGGATATCGAGCGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp ATCTGCTTCCTTAGGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTAGGTCCTTGGTGACTTaGAGCCCATCCACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ICFLRNLPEPYRTILRGGRSLVT*SPSTWK
Trigger: CTTCCAGGTGGATGGGCTCAAAGTCACCAAGGACCT...ACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp ACGGCTGCAGAACTCCTTGGTATACATGTGTCATCTGCTTCCTTAGGAACCTGCGGTGCCCCCAGGTCCTaGGTGACTTTGAGCCCATCC +
Preference number: 5 (lower is better)
Translates to: TAAELLGIHVSSASLGTCGAPRS*VTLSPS
Trigger: GGATGGGCTCAAAGTCACCAAGGACCTGGGGGCACC...GCAGGTTCCTAAGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp GCCTCAGGAAGGTGCGAAACACTGCAACGTCAGCCTCGGGGAGCTTTTGTTCCTATCAAAACAGGGGTTTaGGGTGTCCTCACGTCCCAG +
Preference number: 5 (lower is better)
Translates to: ASGRCETLQRQPRGAFVPIKTGV*GVLTSQ
Trigger: CTGGGACGTGAGGACACCCAAAACCCCTGTTTTGAT...AGGAACAAAAGCTCCCCGAGGCTGACGTTGCAGTGTTTCGCACCTTCCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp AGCAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCAGTAGGTTATCTTaGGTCCAGGCACAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SRDAGQLHALMVPHFQGPISRLS*VQAQPV
Trigger: CACTGGCTGTGCCTGGACCAAAGATAACCTACTGAT...GGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGAATCAGTAGGTTATCTTaGGTCCAGGCACAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRISRLS*VQAQPV
Trigger: CACTGGCTGTGCCTGGACCAAAGATAACCTACTGAT...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp GGAGCTTTTGTTCCTCTTTGGGGACTGAAGAAGCATAGAGGGCATGGGCCTCCACAGGAGGGTGTGGGTTaGGCACACCAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: GAFVPLWGLKKHRGHGPPQEGVG*AHQEWM
Trigger: CATCCACTCTTGGTGTGCCAAACCCACACCCTCCTG...TGGAGGCCCATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp TGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCGGCTCACGGCTGCAGAACTCCTaGGTATACATGTGTCATCTG +
Preference number: 5 (lower is better)
Translates to: WSAPRLDGPTLSRSHPGSRLQNS*VYMCHL
Trigger: CAGATGACACATGTATACCAAGGAGTTCTGCAGCCG...TGAGCCGGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp GGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATCCCCGGCTGCAGAACTCCTaGGTATACATGTGTCATCTG +
Preference number: 5 (lower is better)
Translates to: GCWSAPRLDGPTLSRSHPRLQNS*VYMCHL
Trigger: CAGATGACACATGTATACCAAGGAGTTCTGCAGCCG...GGGATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555727.5
ENST00000557314.5
CDS-3UTR CAA 90 bp AAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGTGGAGTTAGCGCTTCCGCAGTTTCACTaGCCACTCGCTGATTTTCTC +
Preference number: 5 (lower is better)
Translates to: KYTLPCTSPTASCRVELALPQFH*PLADFL
Trigger: GAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAG...CGCTAACTCCACCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCATTTCAGAAAGTACACATaGCCCTGCACGTCTCCCACG +
Preference number: 5 (lower is better)
Translates to: QGCWSAPRLDGPTLSRSHFRKYT*PCTSPT
Trigger: CGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAA...ATGGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CACGGCAAGCTGCAGGGTGGAGTTAGCGCCCAGCCAAGGTTCCAGGCAGCTCACATGGAAACCAGGGCATaGGATAGAAATAAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: HGKLQGGVSAQPRFQAAHMETRA*DRNKVP
Trigger: AGGGACTTTATTTCTATCCAATGCCCTGGTTTCCAT...GTGAGCTGCCTGGAACCTTGGCTGGGCGCTAACTCCACCCTGCAGCTTGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS CCA 90 bp CGGGGAAGCTTCTTTGGGATCCAGTCTGAAATCAGCTGCCCATTCTaGTCCACTAACCTATCAGCCCCATCGATGATCAGGACCTGGGTC +
Preference number: 5 (lower is better)
Translates to: RGSFFGIQSEISCPF*STNLSAPSMIRTWV
Trigger: GACCCAGGTCCTGATCATCGATGGGGCTGATAGGTTAGTGGACCAGAATGGGCAGCTGATTTCAGACTGGATCCCAAAGAAGCTTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS-3UTR CAA 90 bp TCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCACTGTGAAAACTATAAGAAGGCATTaGGGTCTCTGCCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: SALCGRVSSCLGHSCTVKTIRRH*GLCPFL
Trigger: AAGAAAGGGGCAGAGACCCAAATGCCTTCTTATAGT...TTTCACAGTGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp AAGCACACGGTGGCTAGCAGCCGGCAGTCTGGGCTCAGGCAGCAGCCAGTGATTGTGGGGTCAGATGTATaGTTCATGTTTACTTCTGAG +
Preference number: 5 (lower is better)
Translates to: KHTVASSRQSGLRQQPVIVGSDV*FMFTSE
Trigger: CTCAGAAGTAAACATGAACAATACATCTGACCCCAC...AATCACTGGCTGCTGCCTGAGCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCGGTGCTTCCGAGGGTaGTACTTAGCCAGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNRCFRG*YLASWY
Trigger: GTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCG...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp CACTCTGATGACCCAGGAACTGACCAAGCCGCTGTCCTGACTCTGGGTCCCAGATGCTTGATTTCTGAGTaGAGCCTCGAGGGCATCAAT +
Preference number: 5 (lower is better)
Translates to: HSDDPGTDQAAVLTLGPRCLISE*SLEGIN
Trigger: ATTGATGCCCTCGAGGCTCAACTCAGAAATCAAGCA...TCTGGGACCCAGAGTCAGGACAGCGGCTTGGTCAGTTCCTGGGTCATCAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGGGGGCCCTTGTGGGTaGCTCTTTGGACAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: PRVLGPASDARILKPSFKGGPCG*LFGQSL
Trigger: CAGGCTCTGTCCAAAGAGCAACCCACAAGGGCCCCC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp CCACAGGGAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACGAGAGTGTCACATCATaGGGATTCAAATCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: PQGKSSALCGRVSSCLGHESVTS*GFKSVD
Trigger: GTCAACAGATTTGAATCCCAATGATGTGACACTCTC...GTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGACTAATGATGCCACCTaGGCCCCATCAGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQTNDAT*APSGAC
Trigger: GCAGGCTCCTGATGGGGCCAAGGTGGCATCATTAGT...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGGCTGCTCTTTGCCCATaGGTGGAGAAGGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQAALCP*VEKATA
Trigger: TGCTGTGGCCTTCTCCACCAATGGGCAAAGAGCAGC...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TTCCTTGAGTGCCCAGCCCTGCAAGGACCCATCTTCTGCACCACTCACCAATACATCAAAACAGGGGTTTaGGGTGTCCTCACGTCCCAG +
Preference number: 5 (lower is better)
Translates to: FLECPALQGPIFCTTHQYIKTGV*GVLTSQ
Trigger: CTGGGACGTGAGGACACCCAAAACCCCTGTTTTGAT...GTATTGGTGAGTGGTGCAGAAGATGGGTCCTTGCAGGGCTGGGCACTCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGATCAGTAGGTTATCTTaGGTCCAGGCACAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PNSESTHCPARLPRQAAGISRLS*VQAQPV
Trigger: CACTGGCTGTGCCTGGACCAAAGATAACCTACTGAT...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGAGCCCAATCCAGACTaGTCAGCACCCCTAAGTCCT +
Preference number: 5 (lower is better)
Translates to: WQEWHPRVLGPASDARILEPNPD*SAPLSP
Trigger: AGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS TCA 90 bp GGGCAGGCTTGTGGATGTGCAGTCGCTGAACCAGCTTCTTCAGGGTaGACCTTGGAGGATTCTTTTTCTCTGACACTGTATCACCGGCCT +
Preference number: 5 (lower is better)
Translates to: GQACGCAVAEPASSG*TLEDSFSLTLYHRP
Trigger: AGGCCGGTGATACAGTGTCAGAGAAAAAGAATCCTCCAAGGTTCACCCTGAAGAAGCTGGTTCAGCGACTGCACATCCACAAGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
ENST00000557627.1
CDS TCA 90 bp AGCTGCTCATACAACACAGGTATCCTCATTGCCATCCGAAGCTGCTaGCGGCTTAGGTGGCAAAGAAACCTCCGCCTGGGACGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: SCSYNTGILIAIRSC*RLRWQRNLRLGRFF
Trigger: AAAGAACCGTCCCAGGCGGAGGTTTCTTTGCCACCTAAGCCGTCAGCAGCTTCGGATGGCAATGAGGATACCTGTGTTGTATGAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS GCA 90 bp GACTTGAGCCTGGAGCTTGATGGCAGTCTTCAGGATGCCTTCTTCTaGCTTAAGCACTGCAGTCTTCAGAGTGTCACCTCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: DLSLELDGSLQDAFF*LKHCSLQSVTSTQH
Trigger: GTGCTGTGTGGAGGTGACACTCTGAAGACTGCAGTGCTTAAGGCAGAAGAAGGCATCCTGAAGACTGCCATCAAGCTCCAGGCTCAAGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS-3UTR CAA 90 bp AGCAGGGATGCTGGTCAGCTCCACGCCTTGATGGTCCCACACTTTCAAGGTCCCACGGTACAAATCAGCTaGCGTCATGTGAGATATCTG +
Preference number: 5 (lower is better)
Translates to: SRDAGQLHALMVPHFQGPTVQIS*RHVRYL
Trigger: CAGATATCTCACATGACGCAAGCTGATTTGTACCGT...GGGACCTTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACCAGCATCCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACGGCGGGGGTGTCTCTaGGCCCGGTGCTTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKRRGCL*ARCFRG
Trigger: CCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCCG...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGTAACCCAGCAGGGCTaGAACGTGCTGGGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: GLANKTESIEPIGQVSLCVTQQG*NVLGRL
Trigger: AAGCCTGCCCAGCACGTTCAAGCCCTGCTGGGTTAC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGTTCAGCGGGGGCCCTaGTGGGTTGCTCTTTGGACA +
Preference number: 5 (lower is better)
Translates to: PRVLGPASDARILKPSFKVQRGP*WVALWT
Trigger: TGTCCAAAGAGCAACCCACAAGGGCCCCCGCTGAAC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp GGAGCTTTTGTTCCTCTTTGGGGACTGAAGAAGCATAGAGGGCATGGGCCTCCAATCAAACTCCTGGACTaGAGCCTGGAGCTTGATGGC +
Preference number: 5 (lower is better)
Translates to: GAFVPLWGLKKHRGHGPPIKLLD*SLELDG
Trigger: GCCATCAAGCTCCAGGCTCAAGTCCAGGAGTTTGAT...TGGAGGCCCATGCCCTCTATGCTTCTTCAGTCCCCAAAGAGGAACAAAAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCGTCCACAGGAACCCTTaGGCCAGCCAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPVHRNP*ASQRQQ
Trigger: CTGCTGTCTCTGGCTGGCCAAAGGGTTCCTGTGGAC...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp CAAGGTTCCAGGCAGCTCACTGACCCTTCGCATCGGAACAGGCCCAGCAGCTGCGGAATCTTGAATATTTaGTCCATTTGGCCCACATGT +
Preference number: 5 (lower is better)
Translates to: QGSRQLTDPSHRNRPSSCGILNI*SIWPTC
Trigger: ACATGTGGGCCAAATGGACAAAATATTCAAGATTCC...GCAGCTGCTGGGCCTGTTCCGATGCGAAGGGTCAGTGAGCTGCCTGGAACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGCCAGGAAGGCTGTCTaGCCCTGTCCTGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHARKAV*PCPDCP
Trigger: GGGGCAGTCAGGACAGGGCAAGACAGCCTTCCTGGC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAATCAAAACAGGGGTTTaGGGTGTCCTCACGTCCCAG +
Preference number: 5 (lower is better)
Translates to: WQEWHPRVLGPASDARILIKTGV*GVLTSQ
Trigger: CTGGGACGTGAGGACACCCAAAACCCCTGTTTTGAT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp CCGGGTGCCGAACCCTTCCGCAGTTTCACTTGCCACTCGCTGATTTTCTCATCACTTCCGCAGTTTCACTaGCCACTCGCTGATTTTCTC +
Preference number: 5 (lower is better)
Translates to: PGAEPFRSFTCHSLIFSSLPQFH*PLADFL
Trigger: GAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAG...TGATGAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAGGGTTCGGCACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp ATCTGCTTCCTTAGGAACCTGCCAGAGCCGTACAGAACCATCCTCAGAGGCGGTAGAACTCCAGGATCCTaGGGCTGCAGGACAAATATG +
Preference number: 5 (lower is better)
Translates to: ICFLRNLPEPYRTILRGGRTPGS*GCRTNM
Trigger: CATATTTGTCCTGCAGCCCAAGGATCCTGGAGTTCT...ACCGCCTCTGAGGATGGTTCTGTACGGCTCTGGCAGGTTCCTAAGGAAGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS TCA 90 bp AGGGCTATAGGGCAGGTTGAAAGGTCTAGTCCCTTAGAGAAATGCTaGGCCCTCCAACTTGGAGGCTCAGAGAGCAGGCAATTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RAIGQVERSSPLEKC*ALQLGGSESRQLLL
Trigger: CAACAGCAATTGCCTGCTCTCTGAGCCTCCAAGTTGGAGGGCTCAGCATTTCTCTAAGGGACTAGACCTTTCAACCTGCCCTATAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS GCA 90 bp TGTACACACCGGGGAAGCTTCTTTGGGATCCAGTCTGAAATCAGCTaGCCATTCTGGTCCACTAACCTATCAGCCCCATCGATGATCAGG +
Preference number: 5 (lower is better)
Translates to: CTHRGSFFGIQSEIS*PFWSTNLSAPSMIR
Trigger: CCTGATCATCGATGGGGCTGATAGGTTAGTGGACCAGAATGGGCAGCTGATTTCAGACTGGATCCCAAAGAAGCTTCCCCGGTGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp AGCCTCGAGGGCATCAATGGCATCATGGGCGTTAAGAAATCTGAATaGAAACTGCCGACTGTGGATCACCGACTTCGCATGCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SLEGINGIMGVKKSE*KLPTVDHRLRMLES
Trigger: AGACTCCAGCATGCGAAGTCGGTGATCCACAGTCGGCAGTTTCCATTCAGATTTCTTAACGCCCATGATGCCATTGATGCCCTCGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CCA 90 bp TCTGCCACATGTTACCTGTGGTCCATTCTCCTTCTGGGCTGCATTTaGCCAGGTTCCATAGGATCCCATCAGAGCAGATTCAGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: SATCYLWSILLLGCI*PGSIGSHQSRFRFG
Trigger: GCCAAACCTGAATCTGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACCACAGGTAACATGTGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR CAA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTATCAGAGAGCAGGCAATaGCTGTTGTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: WQEWHPRVLGPASDARILSESRQ*LLFTRY
Trigger: GTACCGTGTGAACAACAGCAATTGCCTGCTCTCTGA...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGCTGAGCCCTCCAACTaGGAGGCTCAGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHAEPSN*EAQRAG
Trigger: GCCTGCTCTCTGAGCCTCCAAGTTGGAGGGCTCAGC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GAAAGTCTTCTGCCTTGTGTGGCCGCGTCAGCAGCTGCCTTGGCCACAGCTGCAGAAACCCTATGTACCTaGGAAAACATCTGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: ESLLPCVAASAAALATAAETLCT*ENICEK
Trigger: TTTCTCACAGATGTTTTCCAAGGTACATAGGGTTTC...TGCAGCTGTGGCCAAGGCAGCTGCTGACGCGGCCACACAAGGCAGAAGACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGATGCTGCGCCATCCTaGCTGGGAAACAGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: GLANKTESIEPIGQVSLCDAAPS*LGNRSQ
Trigger: TTGGCTCCTGTTTCCCAGCAAGGATGGCGCAGCATC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCAGAGGGCTGCAGACGTaGGTTCCGGTTCAGGAACTG +
Preference number: 5 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPRGLQT*VPVQEL
Trigger: CAGTTCCTGAACCGGAACCAACGTCTGCAGCCCTCT...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTACTTCCGCAGTTTCACTaGCCACTCGCTGATTTTCTC +
Preference number: 5 (lower is better)
Translates to: WQEWHPRVLGPASDARILLPQFH*PLADFL
Trigger: GAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAG...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CAA 90 bp ATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTGTCACCAGCCCTTCTGGGCTGCATTaGGCCAGGTTCCATAGGATC +
Preference number: 5 (lower is better)
Translates to: ILGLSHSLTSLSFEAVTSPSGLH*ARFHRI
Trigger: GATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGG...GCTGGTGACAGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553365.5
ENST00000555727.5
CDS-3UTR CAA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACTCCGCTTTCAATGGCTaGGCTCCTCACCTCTCATCT +
Preference number: 5 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNSAFNG*APHLSS
Trigger: AGATGAGAGGTGAGGAGCCAAGCCATTGAAAGCGGA...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS GCA 90 bp AGGGCATCAATGGCATCATGGGCGTTAAGAAATCTGAATGGAAACTaGCGACTGTGGATCACCGACTTCGCATGCTGGAGTCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: RASMASWALRNLNGN*RLWITDFACWSLWR
Trigger: TCTCCAGAGACTCCAGCATGCGAAGTCGGTGATCCACAGTCGGCAGTTTCCATTCAGATTTCTTAACGCCCATGATGCCATTGATGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS-3UTR CAA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCCAACCCGCAGCAGGTaGCACAGGTTCCGAAGCATG +
Preference number: 5 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHPTRSR*HRFRSM
Trigger: CATGCTTCGGAACCTGTGCAACCTGCTGCGGGTTGG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp AGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACCAGCTCAGCTTCTCCCTCTaGAGCTGCTCATACAACACA +
Preference number: 5 (lower is better)
Translates to: RSMAYQRMSSSSGQDGNQLSFSL*SCSYNT
Trigger: TGTGTTGTATGAGCAGCTCAAGAGGGAGAAGCTGAG...CTGGTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ACGGCTGCAGAACTCCTTGGTATACATGTGTCATCTGCTTCCTTAGGAACCTGCCTTGTGGGTTGCTCTTaGGACAGAGCCTGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: TAAELLGIHVSSASLGTCLVGCS*DRACLH
Trigger: ATGCAGACAGGCTCTGTCCAAAGAGCAACCCACAAG...GCAGGTTCCTAAGGAAGCAGATGACACATGTATACCAAGGAGTTCTGCAGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGTCCACAGGAACCCTTaGGCCAGCCAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFVHRNP*ASQRQQ
Trigger: CTGCTGTCTCTGGCTGGCCAAAGGGTTCCTGTGGAC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATCAGGAGCCAAGGGGCTaGGAGTGTCCTCTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHQEPRG*ECPLPV
Trigger: CACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCTG...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACGCCACCACATGGAGGTaGGTAAGGAACTTCGAAAGA +
Preference number: 5 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNATTWR*VRNFER
Trigger: TCTTTCGAAGTTCCTTACCAACCTCCATGTGGTGGC...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATGCCCACAGCTGCTCTTaGCCCATTGGTGGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHAHSCS*PIGGEG
Trigger: GCCTTCTCCACCAATGGGCAAAGAGCAGCTGTGGGC...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGGTGCCCCCAGGTCCTaGGTGACTTTGAGCCCATCC +
Preference number: 5 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLGAPRS*VTLSPS
Trigger: GGATGGGCTCAAAGTCACCAAGGACCTGGGGGCACC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTATCAAAACAGGGGTTTaGGGTGTCCTCACGTCCCAG +
Preference number: 5 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAIKTGV*GVLTSQ
Trigger: CTGGGACGTGAGGACACCCAAAACCCCTGTTTTGAT...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555008.5
ENST00000555727.5
CDS-3UTR CAA 90 bp CCATCACTGGAGCAGGATATCAGTAGGTTATCTTTGGTCCAGGCACAGCCAGTGATCAGTAGGTTATCTTaGGTCCAGGCACAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PSLEQDISRLSLVQAQPVISRLS*VQAQPV
Trigger: CACTGGCTGTGCCTGGACCAAAGATAACCTACTGAT...CACTGGCTGTGCCTGGACCAAAGATAACCTACTGATATCCTGCTCCAGTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471684.2
ENST00000555727.5
ENST00000556488.5
ENST00000557314.5
CDS-3UTR CAA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAGAGCCCAATCCAGACTaGTCAGCACCCCTAAGTCCT +
Preference number: 5 (lower is better)
Translates to: PRVLGPASDARILKPSFKEPNPD*SAPLSP
Trigger: AGGACTTAGGGGTGCTGACAAGTCTGGATTGGGCTC...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CAA 90 bp GACAGAAGCATGGCCTATCAGCGGATGTCATCATCCTCTGGTCAGGATGGAAACAGAACTCCAGGATCCTaGGGCTGCAGGACAAATATG +
Preference number: 5 (lower is better)
Translates to: DRSMAYQRMSSSSGQDGNRTPGS*GCRTNM
Trigger: CATATTTGTCCTGCAGCCCAAGGATCCTGGAGTTCT...GTTTCCATCCTGACCAGAGGATGATGACATCCGCTGATAGGCCATGCTTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCCTTCTGGGCTGCATTaGGCCAGGTTCCATAGGATC +
Preference number: 5 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPPSGLH*ARFHRI
Trigger: GATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CAA 90 bp ATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTGTCACCAGCTCAAACTGGGCAAATTaGTCCGTCATGGCAGTACGG +
Preference number: 5 (lower is better)
Translates to: ILGLSHSLTSLSFEAVTSSNWAN*SVMAVR
Trigger: CCGTACTGCCATGACGGACAAATTTGCCCAGTTTGA...GCTGGTGACAGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGGGGGTGGTGGAATCTaGAATATTTTGTCCATTTGG +
Preference number: 5 (lower is better)
Translates to: WQEWHPRVLGPASDARILGGGGI*NILSIW
Trigger: CCAAATGGACAAAATATTCAAGATTCCACCACCCCC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAGGTGCCCCCAGGTCCTaGGTGACTTTGAGCCCATCC +
Preference number: 5 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVGAPRS*VTLSPS
Trigger: GGATGGGCTCAAAGTCACCAAGGACCTGGGGGCACC...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTCCACTCACCAATACCTaGGGGCTTAGCCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLPLTNT*GLSQAR
Trigger: CCTGGCCTGGCTAAGCCCCAAGGTATTGGTGAGTGG...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCAGGAGGGTGTGGGTTaGGCACACCAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHQEGVG*AHQEWM
Trigger: CATCCACTCTTGGTGTGCCAAACCCACACCCTCCTG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp CCCAATTCAGAAAGTACACATTGCCCTGCACGTCTCCCACGGCAAGCTGCAGGGAATATGCCATACTCCTaGTGGGTGGACAATATCATA +
Preference number: 5 (lower is better)
Translates to: PNSESTHCPARLPRQAAGNMPYS*WVDNII
Trigger: TATGATATTGTCCACCCACAAGGAGTATGGCATATT...CCCTGCAGCTTGCCGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553365.5
ENST00000555008.5
ENST00000555727.5
CDS TCA 90 bp AGGCAATTGCTGTTGTTCACACGGTACAAATCAGCTTGCGTCATGTaGGATATCTGTAGACTCTGGAACAAGGGGCTGGCAGACACAGTG +
Preference number: 5 (lower is better)
Translates to: RQLLLFTRYKSACVM*DICRLWNKGLADTV
Trigger: CACTGTGTCTGCCAGCCCCTTGTTCCAGAGTCTACAGATATCTCACATGACGCAAGCTGATTTGTACCGTGTGAACAACAGCAATTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556549.1
ENST00000556935.5
CDS GCA 90 bp AGAAATGCTGAGCCCTCCAACTTGGAGGCTCAGAGAGCAGGCAATTaGTGTTGTTCACACGGTACAAATCAGCTTGCGTCATGTGAGATA +
Preference number: 5 (lower is better)
Translates to: RNAEPSNLEAQRAGN*CCSHGTNQLASCEI
Trigger: TATCTCACATGACGCAAGCTGATTTGTACCGTGTGAACAACAGCAATTGCCTGCTCTCTGAGCCTCCAAGTTGGAGGGCTCAGCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556549.1
ENST00000556935.5
CDS-3UTR CAA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAGAGAGTGTCACATCATaGGGATTCAAATCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: WQEWHPRVLGPASDARILESVTS*GFKSVD
Trigger: GTCAACAGATTTGAATCCCAATGATGTGACACTCTC...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGAAGTAGATGAGAGCTaGGGCAGAGGGCTGCAGACG +
Preference number: 5 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLEVDES*GRGLQT
Trigger: CGTCTGCAGCCCTCTGCCCAAGCTCTCATCTACTTC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCAGCAGTCGCATCTGGTaGTTAAATGGTGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLANKTESIEPIGQVSLCSSRIW*LNGDSS
Trigger: GGAGGAGTCACCATTTAACAACCAGATGCGACTGCT...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACGGTCAGCTCCACGCCTaGATGGTCCCACACTTTCAA +
Preference number: 5 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHGQLHA*MVPHFQ
Trigger: TTGAAAGTGTGGGACCATCAAGGCGTGGAGCTGACC...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCCGGCTGCAGAACTCCTaGGTATACATGTGTCATCTG +
Preference number: 5 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPRLQNS*VYMCHL
Trigger: CAGATGACACATGTATACCAAGGAGTTCTGCAGCCG...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAAGAACTCCAGGATCCTaGGGCTGCAGGACAAATATG +
Preference number: 5 (lower is better)
Translates to: PRVLGPASDARILKPSFKRTPGS*GCRTNM
Trigger: CATATTTGTCCTGCAGCCCAAGGATCCTGGAGTTCT...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CAA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATCCTTCTGGGCTGCATTaGGCCAGGTTCCATAGGATC +
Preference number: 5 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHPSGLH*ARFHRI
Trigger: GATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGG...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp AGCAGCTGCATACTGGGTCTCTCCCATAGCTTAACATCTCTGTCCTTCGAAGCTAAACTCATCCAGCCTTaGGGAGACACTGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: SSCILGLSHSLTSLSFEAKLIQP*GDTETP
Trigger: TGGAGTTTCAGTGTCTCCCAAAGGCTGGATGAGTTT...AGCTTCGAAGGACAGAGATGTTAAGCTATGGGAGAGACCCAGTATGCAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS-3UTR CAA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGATGGCCAAGATGTTATaGGCCACATTCCGGACGTTC +
Preference number: 5 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKMAKML*ATFRTF
Trigger: GAACGTCCGGAATGTGGCCAATAACATCTTGGCCAT...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCTCCCAGACCGACGCTTaGTTCCCCCGTAGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGISQTDA*FPRRLS
Trigger: GCTGAGCCTACGGGGGAACAAAGCGTCGGTCTGGGA...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCACACAGGTATCCTCATaGCCATCCGAAGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFTQVSS*PSEAAD
Trigger: GTCAGCAGCTTCGGATGGCAATGAGGATACCTGTGT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGCTTGTGGGTTGCTCTTaGGACAGAGCCTGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWLVGCS*DRACLH
Trigger: ATGCAGACAGGCTCTGTCCAAAGAGCAACCCACAAG...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACCCAACAAAGAGGCACTaGGAATTCACACGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHPTKRH*EFTRCQ
Trigger: CTGGCAGCGTGTGAATTCCAAGTGCCTCTTTGTTGG...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GGTCCCAGAGCCCCACAGAGCCATCACTGGAGCAGGATATCAGTAGGTTATCTTGGAATCTTGAATATTTaGTCCATTTGGCCCACATGT +
Preference number: 5 (lower is better)
Translates to: GPRAPQSHHWSRISVGYLGILNI*SIWPTC
Trigger: ACATGTGGGCCAAATGGACAAAATATTCAAGATTCC...AAGATAACCTACTGATATCCTGCTCCAGTGATGGCTCTGTGGGGCTCTGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555727.5
CDS-3UTR CAA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCAAGGCACACTTCCAGTaGTCTGTTCCTACGGGTCTC +
Preference number: 5 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFKAHFQ*SVPTGL
Trigger: GAGACCCGTAGGAACAGACAACTGGAAGTGTGCCTT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAAGGTCCTTGGTGACTTaGAGCCCATCCACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPRSLVT*SPSTWK
Trigger: CTTCCAGGTGGATGGGCTCAAAGTCACCAAGGACCT...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGAGAACTCCAGGATCCTaGGGCTGCAGGACAAATATG +
Preference number: 5 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKRTPGS*GCRTNM
Trigger: CATATTTGTCCTGCAGCCCAAGGATCCTGGAGTTCT...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCGTCTGTCCCTGGAGTTaGGGTTTCTGGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFVCPWS*GFWSVC
Trigger: GCAAACACTCCAGAAACCCAAACTCCAGGGACAGAC...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CAA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACTTCAGAAAGTACACATaGCCCTGCACGTCTCCCACG +
Preference number: 5 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHFRKYT*PCTSPT
Trigger: CGTGGGAGACGTGCAGGGCAATGTGTACTTTCTGAA...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAACGGTACAAATCAGCTaGCGTCATGTGAGATATCTG +
Preference number: 5 (lower is better)
Translates to: PRVLGPASDARILKPSFKTVQIS*RHVRYL
Trigger: CAGATATCTCACATGACGCAAGCTGATTTGTACCGT...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAACCAACGACCCAAAGTaGCTTCCTGAGCTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPTNDPK*LPELSL
Trigger: CAGAGACAGCTCAGGAAGCAACTTTGGGTCGTTGGT...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACTCAAACTGGGCAAATTaGTCCGTCATGGCAGTACGG +
Preference number: 5 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHSNWAN*SVMAVR
Trigger: CCGTACTGCCATGACGGACAAATTTGCCCAGTTTGA...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTATCAAACTCCTGGACTaGAGCCTGGAGCTTGATGGC +
Preference number: 5 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLIKLLD*SLELDG
Trigger: GCCATCAAGCTCCAGGCTCAAGTCCAGGAGTTTGAT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCATCCATCATCCATGCTTaGGCCAAGGAGGATGACCCT +
Preference number: 5 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPSIIHA*AKEDDP
Trigger: AGGGTCATCCTCCTTGGCCAAAGCATGGATGATGGA...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAAGGCACACTTCCAGTaGTCTGTTCCTACGGGTCTC +
Preference number: 5 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLKAHFQ*SVPTGL
Trigger: GAGACCCGTAGGAACAGACAACTGGAAGTGTGCCTT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACGGAAAGTCTTCTGCCTaGTGTGGCCGCGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: MPITILTKVESRVRSWENGKSSA*CGRVSS
Trigger: GCTGCTGACGCGGCCACACAAGGCAGAAGACTTTCC...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGATCAGTAGGTTATCTTaGGTCCAGGCACAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWISRLS*VQAQPV
Trigger: CACTGGCTGTGCCTGGACCAAAGATAACCTACTGAT...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGTCTGTCCCTGGAGTTaGGGTTTCTGGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLVCPWS*GFWSVC
Trigger: GCAAACACTCCAGAAACCCAAACTCCAGGGACAGAC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CAA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCAAGTCGTGTCAGAAGTaGGGAAAACCAGAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: GLANKTESIEPIGQVSLCKSCQK*GKPEGL
Trigger: CAAACCTTCTGGTTTTCCCAACTTCTGACACGACTT...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAACAAGTCCTTGAATTCTaGGCCACAGAAGACATTTCC +
Preference number: 5 (lower is better)
Translates to: PRVLGPASDARILKPSFKQVLEF*ATEDIS
Trigger: GGAAATGTCTTCTGTGGCCAAGAATTCAAGGACTTG...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp TGGCAAGAATGGCATCCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAACAAGACTGAATCTATaGAGCCTATTGGTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: WQEWHPRVLGPASDARILTRLNL*SLLVKL
Trigger: TAACTTGACCAATAGGCTCAATAGATTCAGTCTTGT...TAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS CCA 90 bp GGAATCTTGAATATTTTGTCCATTTGGCCCACATGTTCCAGAAGATaGGAGGCCCCATGCTCTGCAATGAACTTCAGTATCGCATCAGTA +
Preference number: 5 (lower is better)
Translates to: GILNILSIWPTCSRR*EAPCSAMNFSIASV
Trigger: TACTGATGCGATACTGAAGTTCATTGCAGAGCATGGGGCCTCCCATCTTCTGGAACATGTGGGCCAAATGGACAAAATATTCAAGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS-3UTR CAA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAATGGCTGAAACTCAGCTaGTATATGCCTGGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKWLKLS*YMPGAS
Trigger: GGACGCCCCAGGCATATACAAGCTGAGTTTCAGCCA...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GGCCTGGCCAACAAGACTGAATCTATTGAGCCTATTGGTCAAGTTAGCCTTTGCGTGGGGTCAGATGTATaGTTCATGTTTACTTCTGAG +
Preference number: 5 (lower is better)
Translates to: GLANKTESIEPIGQVSLCVGSDV*FMFTSE
Trigger: CTCAGAAGTAAACATGAACAATACATCTGACCCCAC...GCAAAGGCTAACTTGACCAATAGGCTCAATAGATTCAGTCTTGTTGGCCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTTCCACTGTCTGGCCTaGTGTACTCTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRFHCLA*CTLSFS
Trigger: GGAGAAGCTGAGAGTACACAAGGCCAGACAGTGGAA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTGCCACCACATGGAGGTaGGTAAGGAACTTCGAAAGA +
Preference number: 5 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLATTWR*VRNFER
Trigger: TCTTTCGAAGTTCCTTACCAACCTCCATGTGGTGGC...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAGACAGGCTGGAGCTTaGCTGATTTTTCATGGTCCG +
Preference number: 5 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLRQAGA*LIFHGP
Trigger: CGGACCATGAAAAATCAGCAAAGCTCCAGCCTGTCT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555008.5
CDS-3UTR CAA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCACGGCTGCAGAACTCCTaGGTATACATGTGTCATCTG +
Preference number: 5 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPRLQNS*VYMCHL
Trigger: CAGATGACACATGTATACCAAGGAGTTCTGCAGCCG...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATAAACTCATCCAGCCTTaGGGAGACACTGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHKLIQP*GDTETP
Trigger: TGGAGTTTCAGTGTCTCCCAAAGGCTGGATGAGTTT...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAATCCATGAACCAAACTTaGAGTACCTCTGCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: PRVLGPASDARILKPSFKSMNQT*STSALD
Trigger: ATCTAGAGCAGAGGTACTCAAAGTTTGGTTCATGGA...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS CCA 90 bp ACAGGTATTGTACCCTTCTTAGGAGGATACCAACAAAGAGGCACTTaGAATTCACACGCTGCCAGTAAAGCTGTTTGGCCACATTTATCA +
Preference number: 5 (lower is better)
Translates to: TGIVPFLGGYQQRGT*NSHAASKAVWPHLS
Trigger: TGATAAATGTGGCCAAACAGCTTTACTGGCAGCGTGTGAATTCCAAGTGCCTCTTTGTTGGTATCCTCCTAAGAAGGGTACAATACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS-3UTR CAA 90 bp AAGCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCACTATAAGAAGGCATTaGGGTCTCTGCCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: KLPVSSGFASLAQGVSLFTIRRH*GLCPFL
Trigger: AAGAAAGGGGCAGAGACCCAAATGCCTTCTTATAGT...GAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGCCTACACTTAGGAAAGGGCAATGCTaGATTTCTGAGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: IEYPPVLNPHENTGRPTLRKGQC*ISELSL
Trigger: GAGGCTCAACTCAGAAATCAAGCATTGCCCTTTCCT...AAGTGTAGGCCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGGGGGGTGGTGGAATCTaGAATATTTTGTCCATTTGG +
Preference number: 5 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWGGGGI*NILSIW
Trigger: CCAAATGGACAAAATATTCAAGATTCCACCACCCCC...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp CCTAGGGTCCTAGGGCCCGCGAGTGATGCAAGAATTCTAAAACCTAGTTTCAAAAATATGCCATACTCCTaGTGGGTGGACAATATCATA +
Preference number: 5 (lower is better)
Translates to: PRVLGPASDARILKPSFKNMPYS*WVDNII
Trigger: TATGATATTGTCCACCCACAAGGAGTATGGCATATT...TTTGAAACTAGGTTTTAGAATTCTTGCATCACTCGCGGGCCCTAGGACCCTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CAA 90 bp CACAAGGTAGATGTGGAAATGATGGTCCAGAAGGTATATTTCGAGGCTTGGCATATCTCCTACAAGTCCTaGAATTCTTGGCCACAGAAG +
Preference number: 5 (lower is better)
Translates to: HKVDVEMMVQKVYFEAWHISYKS*NSWPQK
Trigger: CTTCTGTGGCCAAGAATTCAAGGACTTGTAGGAGAT...ATGCCAAGCCTCGAAATATACCTTCTGGACCATCATTTCCACATCTACCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp GCTACCAGTGTCTTCAGGCTTTGCATCTCTAGCACAAGGGGTATCATTATTCCCAATCTATTGAGCCTATaGGTCAAGTTAGCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: ATSVFRLCISSTRGIIIPNLLSL*VKLAFA
Trigger: AGCAAAGGCTAACTTGACCAATAGGCTCAATAGATT...GGGAATAATGATACCCCTTGTGCTAGAGATGCAAAGCCTGAAGACACTGGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAGCATACAAAGATGCCTaGAGGATAAACTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVAYKDA*RINSGS
Trigger: GGAGCCTGAGTTTATCCTCAAGGCATCTTTGTATGC...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGTGCTTGATTTCTGAGTaGAGCCTCGAGGGCATCAAT +
Preference number: 5 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRCLISE*SLEGIN
Trigger: ATTGATGCCCTCGAGGCTCAACTCAGAAATCAAGCA...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCGTCTGTCCCTGGAGTTaGGGTTTCTGGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGIVCPWS*GFWSVC
Trigger: GCAAACACTCCAGAAACCCAAACTCCAGGGACAGAC...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAATCTCCTACAAGTCCTaGAATTCTTGGCCACAGAAG +
Preference number: 5 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPISYKS*NSWPQK
Trigger: CTTCTGTGGCCAAGAATTCAAGGACTTGTAGGAGAT...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp GTCCAGAAGGTATATTTCGAGGCTTGGCATGAGGCACATAAGAGAAGACAGAAGAATCTATTGAGCCTATaGGTCAAGTTAGCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: VQKVYFEAWHEAHKRRQKNLLSL*VKLAFA
Trigger: AGCAAAGGCTAACTTGACCAATAGGCTCAATAGATT...CTTCTGTCTTCTCTTATGTGCCTCATGCCAAGCCTCGAAATATACCTTCTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp TTGAAATCAATGACTAGGATGATGCCATGCCATAGTTCGCTGCAGGATTTCTGGTCCATGAACCAAACTTaGAGTACCTCTGCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: LKSMTRMMPCHSSLQDFWSMNQT*STSALD
Trigger: ATCTAGAGCAGAGGTACTCAAAGTTTGGTTCATGGA...CCAGAAATCCTGCAGCGAACTATGGCATGGCATCATCCTAGTCATTGATTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp CATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTAAAACCTGGAATCACCGGGGAAGCTTCTTaGGGATCCAGTCTGAAATCA +
Preference number: 5 (lower is better)
Translates to: HWIEIKSLRLFLHVKPGITGEAS*GSSLKS
Trigger: TGATTTCAGACTGGATCCCAAAGAAGCTTCCCCGGT...GATTCCAGGTTTTACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACCTTCCGCAGTTTCACTaGCCACTCGCTGATTTTCTC +
Preference number: 5 (lower is better)
Translates to: MPITILTKVESRVRSWENLPQFH*PLADFL
Trigger: GAGAAAATCAGCGAGTGGCAAGTGAAACTGCGGAAG...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGGGAAAACCAGAAGGTTaGTTCCGCTTTCAATGGCTT +
Preference number: 5 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRGKPEG*FRFQWL
Trigger: AAGCCATTGAAAGCGGAACAAACCTTCTGGTTTTCC...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TGGAAACCAGGGCATTGGATAGAAATAAAGTCCCTCAGGTTATTTCTCCATGTACAAGTCCTTGAATTCTaGGCCACAGAAGACATTTCC +
Preference number: 5 (lower is better)
Translates to: WKPGHWIEIKSLRLFLHVQVLEF*ATEDIS
Trigger: GGAAATGTCTTCTGTGGCCAAGAATTCAAGGACTTG...TACATGGAGAAATAACCTGAGGGACTTTATTTCTATCCAATGCCCTGGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp TCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAACCTACCAAACCAGGAATCTTGAATATTTaGTCCATTTGGCCCACATGT +
Preference number: 5 (lower is better)
Translates to: SFLDQGVVVFLQEKPTKPGILNI*SIWPTC
Trigger: ACATGTGGGCCAAATGGACAAAATATTCAAGATTCC...TGGTTTGGTAGGTTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACTCTTTAGATGTGGTGTaGGCTCACTATCCATGCTGG +
Preference number: 5 (lower is better)
Translates to: MPITILTKVESRVRSWENSLDVV*AHYPCW
Trigger: CCAGCATGGATAGTGAGCCAACACCACATCTAAAGA...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp GTCTCACAATCCAGTGGTTATAACTGTAAAACTCATCCAGCCTTTGGGAGACACACAAGACTGAATCTATaGAGCCTATTGGTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: VSQSSGYNCKTHPAFGRHTRLNL*SLLVKL
Trigger: TAACTTGACCAATAGGCTCAATAGATTCAGTCTTGT...GTGTCTCCCAAAGGCTGGATGAGTTTTACAGTTATAACCACTGGATTGTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp ATGCCAATTACCATATTGACTAAAGTTGAAAGTCGTGTCAGAAGTTGGGAAAACAGCAGGCAATTGCTGTaGTTCACACGGTACAAATCA +
Preference number: 5 (lower is better)
Translates to: MPITILTKVESRVRSWENSRQLL*FTRYKS
Trigger: TGATTTGTACCGTGTGAACAACAGCAATTGCCTGCT...GTTTTCCCAACTTCTGACACGACTTTCAACTTTAGTCAATATGGTAATTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS-3UTR CAA 90 bp TACATACACATAGAATATCCTCCTGTTCTAAATCCACATGAGAACACAGGCAGGAATATGCCATACTCCTaGTGGGTGGACAATATCATA +
Preference number: 5 (lower is better)
Translates to: YIHIEYPPVLNPHENTGRNMPYS*WVDNII
Trigger: TATGATATTGTCCACCCACAAGGAGTATGGCATATT...CCTGCCTGTGTTCTCATGTGGATTTAGAACAGGAGGATATTCTATGTGTATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000553365.5
ENST00000555008.5
CDS-3UTR CAA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAATGGAAACCAGGGCATaGGATAGAAATAAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKMETRA*DRNKVP
Trigger: AGGGACTTTATTTCTATCCAATGCCCTGGTTTCCAT...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000553365.5
CDS-3UTR CAA 90 bp AGTCTTCAAAACTCATTTCTAGACCAGGGTGTAGTGGTATTTCTCCAAGAGAAAGAAACCCTATGTACCTaGGAAAACATCTGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: SLQNSFLDQGVVVFLQEKETLCT*ENICEK
Trigger: TTTCTCACAGATGTTTTCCAAGGTACATAGGGTTTC...TTTCTCTTGGAGAAATACCACTACACCCTGGTCTAGAAATGAGTTTTGAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS TCA 90 bp ATAAAAACTTGTACATCACCTAACTACATCTGGTATAATGATCTATaGTGCCAACATTACTCAAAGCAGGTACCACTGTTTACTTTGGTG +
Preference number: 5 (lower is better)
Translates to: IKTCTSPNYIWYNDL*CQHYSKQVPLFTLV
Trigger: CACCAAAGTAAACAGTGGTACCTGCTTTGAGTAATGTTGGCATCATAGATCATTATACCAGATGTAGTTAGGTGATGTACAAGTTTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557627.1
CDS CCA 72 bp CGAGCAGAGGCCTCCAGAGGCCCCAAGGCCAGCACGTaGGCACCCTGGCTCTGCTCAAGGGTCTCCCCTAGG +
Preference number: 6 (lower is better)
Translates to: RAEASRGPKAST*APWLCSRVSPR
Trigger: CCTAGGGGAGACCCTTGAGCAGAGCCAGGGTGCCCACGTGCTGGCCTTGGGGCCTCTGGAGGCCTCTGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 90 bp GGAGGCTCCATCCCTGGAGAGCGGGGTGGCCGGCGGGGGTGTCTCTaGGCCCGGTGCTTCCGAGGGTTGTACTTAGCCAGCTGGTACTCG +
Preference number: 6 (lower is better)
Translates to: GGSIPGERGGRRGCL*ARCFRGLYLASWYS
Trigger: CGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCCGGCCACCCCGCTCTCCAGGGATGGAGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CAA 90 bp CTGCCCCGTCACCAGGCTCAGCCTTCCGTGGGGCAGCATCAGCCGTaGCACTGTGTCCTGAAGAAGGCGTGGCCGGGCAGGACTCGGTGG +
Preference number: 6 (lower is better)
Translates to: LPRHQAQPSVGQHQP*HCVLKKAWPGRTRW
Trigger: CCACCGAGTCCTGCCCGGCCACGCCTTCTTCAGGACACAGTGCAACGGCTGATGCTGCCCCACGGAAGGCTGAGCCTGGTGACGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 72 bp GAGCGGGGTGGCCGGCGGGGGTGTCTCTTGGCCCGGTaGTTCCGAGGGTTGTACTTAGCCAGCTGGTACTCG +
Preference number: 6 (lower is better)
Translates to: ERGGRRGCLLAR*FRGLYLASWYS
Trigger: CGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCCGGCCACCCCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000557627.1
CDS GCA 72 bp AAGGCTGATACGGTGAGGGGCCGCTCGGGCCTGCAGTaGTGGCAGCACAGACCTCAGCAGCAGGTCCCGCTC +
Preference number: 6 (lower is better)
Translates to: KADTVRGRSGLQ*WQHRPQQQVPL
Trigger: GAGCGGGACCTGCTGCTGAGGTCTGTGCTGCCAGCACTGCAGGCCCGAGCGGCCCCTCACCGTATCAGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp GCCTCCAGAGGCCCCAAGGCCAGCACGTGGGCACCCTaGCTCTGCTCAAGGGTCTCCCCTAGGCCTGCATCA +
Preference number: 6 (lower is better)
Translates to: ASRGPKASTWAP*LCSRVSPRPAS
Trigger: TGATGCAGGCCTAGGGGAGACCCTTGAGCAGAGCCAGGGTGCCCACGTGCTGGCCTTGGGGCCTCTGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 72 bp CTGACTGGAGAGCGGGGTGGCCGGCGGGGGTGTCTCTaGGCCCGGTGCTTCCGAGGGTTGTACTTAGCCAGC +
Preference number: 6 (lower is better)
Translates to: LTGERGGRRGCL*ARCFRGLYLAS
Trigger: GCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCCGGCCACCCCGCTCTCCAGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557627.1
CDS CAA 72 bp CACCAGGCTCAGCCTTCCGTGGGGCAGCATCAGCCGTaGCACTGTGTCCTGAAGAAGGCGTGGCCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: HQAQPSVGQHQP*HCVLKKAWPGR
Trigger: CCTGCCCGGCCACGCCTTCTTCAGGACACAGTGCAACGGCTGATGCTGCCCCACGGAAGGCTGAGCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 72 bp AGAGATGCCAGGAAGGCTGTCTTGCCCTGTCCTGACTaGCCCGTCACCAGGCTCAGCCTTCCGTGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: RDARKAVLPCPD*PVTRLSLPWGS
Trigger: GCTGCCCCACGGAAGGCTGAGCCTGGTGACGGGGCAGTCAGGACAGGGCAAGACAGCCTTCCTGGCATCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 72 bp GCCCCATCGATGATCAGGACCTGGGTCTGGCCAGGATaGAGGGACTCAGCAGACTTGGGCAGCAGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: APSMIRTWVWPG*RDSADLGSSLC
Trigger: GCAGAGGCTGCTGCCCAAGTCTGCTGAGTCCCTGCATCCTGGCCAGACCCAGGTCCTGATCATCGATGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp GTCCGATTCCCGCAGCAGGAAGCAGAAACTTCGCTCTaGATTCTGCCGGTGGGAAGGGTGGCAGCCGGGGGA +
Preference number: 6 (lower is better)
Translates to: VRFPQQEAETSL*ILPVGRVAAGG
Trigger: TCCCCCGGCTGCCACCCTTCCCACCGGCAGAATCCAGAGCGAAGTTTCTGCTTCCTGCTGCGGGAATCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262715.10
CDS CCA 72 bp TGTGTCCTGAAGAAGGCGTGGCCGGGCAGGACTCGGTaGCTTCTGCAGCTGCTGGAAGGTGGCCTGGACCAA +
Preference number: 6 (lower is better)
Translates to: CVLKKAWPGRTR*LLQLLEGGLDQ
Trigger: TTGGTCCAGGCCACCTTCCAGCAGCTGCAGAAGCCACCGAGTCCTGCCCGGCCACGCCTTCTTCAGGACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 90 bp GCCGGATGCTGCGCCATCCTTGCTGGGAAACAGGAGCCAAGGGGCTaGGAGTGTCCTCTTCCAGTGGCCGGAGAGACTGGACCCCTGTCT +
Preference number: 6 (lower is better)
Translates to: AGCCAILAGKQEPRG*ECPLPVAGETGPLS
Trigger: AGACAGGGGTCCAGTCTCTCCGGCCACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCTGTTTCCCAGCAAGGATGGCGCAGCATCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 90 bp CGGGGTGGCCGGCGGGGGTGTCTCTTGGCCCGGTGCTTCCGAGGGTaGTACTTAGCCAGCTGGTACTCGTCAAACTGGGCAAATTTGTCC +
Preference number: 6 (lower is better)
Translates to: RGGRRGCLLARCFRG*YLASWYSSNWANLS
Trigger: GGACAAATTTGCCCAGTTTGACGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCCGGCCACCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000557627.1
CDS GCA 72 bp ACCAAGACAGTGCGGCCTGGCAGCAGGGGCAGGCTGTaGTTCACAGAGAGGTTCACAGCTGTCTCTAGGGCC +
Preference number: 6 (lower is better)
Translates to: TKTVRPGSRGRL*FTERFTAVSRA
Trigger: GGCCCTAGAGACAGCTGTGAACCTCTCTGTGAAGCACAGCCTGCCCCTGCTGCCAGGCCGCACTGTCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 72 bp AGGGCAGTCAAGGCCTGGGGAAGGACATCAGGCCCGTaGTCCTTCTCCAGTGTGCTCAGGATGTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RAVKAWGRTSGP*SFSSVLRMCCS
Trigger: GCTGCAGCACATCCTGAGCACACTGGAGAAGGAGCACGGGCCTGATGTCCTTCCCCAGGCCTTGACTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp AACAGGAGCCAAGGGGCTTGGAGTGTCCTCTTCCAGTaGCCGGAGAGACTGGACCCCTGTCTTTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: NRSQGAWSVLFQ*PERLDPCLSWG
Trigger: CCCCCAGGAAAGACAGGGGTCCAGTCTCTCCGGCCACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp GCGCCATCCTTGCTGGGAAACAGGAGCCAAGGGGCTTaGAGTGTCCTCTTCCAGTGGCCGGAGAGACTGGAC +
Preference number: 6 (lower is better)
Translates to: APSLLGNRSQGA*SVLFQWPERLD
Trigger: GTCCAGTCTCTCCGGCCACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCTGTTTCCCAGCAAGGATGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 72 bp CGGCGGGGGTGTCTCTTGGCCCGGTGCTTCCGAGGGTaGTACTTAGCCAGCTGGTACTCGTCAAACTGGGCA +
Preference number: 6 (lower is better)
Translates to: RRGCLLARCFRG*YLASWYSSNWA
Trigger: TGCCCAGTTTGACGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAAGAGACACCCCCGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000557627.1
CDS CAA 72 bp TGCAGGGCTGACACAAGAGATGCCAGGAAGGCTGTCTaGCCCTGTCCTGACTGCCCCGTCACCAGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: CRADTRDARKAV*PCPDCPVTRLS
Trigger: GCTGAGCCTGGTGACGGGGCAGTCAGGACAGGGCAAGACAGCCTTCCTGGCATCTCTTGTGTCAGCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp GGCAGCTGGACAATGGCACAGAAATATCGTCGCAGGTaGGGGCGACACGCCGGCAAGAAAGCAGCAATGGCC +
Preference number: 6 (lower is better)
Translates to: GSWTMAQKYRRR*GRHAGKKAAMA
Trigger: GGCCATTGCTGCTTTCTTGCCGGCGTGTCGCCCCCACCTGCGACGATATTTCTGTGCCATTGTCCAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CCA 72 bp GGGCTTGGAGTGTCCTCTTCCAGTGGCCGGAGAGACTaGACCCCTGTCTTTCCTGGGGGTGGTGGAATCTTG +
Preference number: 6 (lower is better)
Translates to: GLGVSSSSGRRD*TPVFPGGGGIL
Trigger: CAAGATTCCACCACCCCCAGGAAAGACAGGGGTCCAGTCTCTCCGGCCACTGGAAGAGGACACTCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp GGGAAGTGGCCAGTCCTAGCACAGGCTTCTGGAATCTaGACAGGAGCCAGAGGGACTTGGGGCTTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: GKWPVLAQASGI*TGARGTWGLAR
Trigger: CCTGGCTAAGCCCCAAGTCCCTCTGGCTCCTGTCCAGATTCCAGAAGCCTGTGCTAGGACTGGCCACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471684.2
CDS CCA 72 bp CAGCTTGTATATGCCTTAGACTGGGGCTGGAAACCCTaGGTGCCTGACCTGGGGCGTCCGATTCCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: QLVYALDWGWKP*VPDLGRPIPAA
Trigger: TGCTGCGGGAATCGGACGCCCCAGGTCAGGCACCCAGGGTTTCCAGCCCCAGTCTAAGGCATATACAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556549.1
CDS CAA 72 bp TGCGCCATCCTTGCTGGGAAACAGGAGCCAAGGGGCTaGGAGTGTCCTCTTCCAGTGGCCGGAGAGACTGGA +
Preference number: 6 (lower is better)
Translates to: CAILAGKQEPRG*ECPLPVAGETG
Trigger: TCCAGTCTCTCCGGCCACTGGAAGAGGACACTCCAAGCCCCTTGGCTCCTGTTTCCCAGCAAGGATGGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 72 bp GTCACTCTACCAATGAGTTCCTCCCAGACCGACGCTTaGTTCCCCCGTAGGCTCAGCTCCCGCTCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: VTLPMSSSQTDA*FPRRLSSRSQV
Trigger: GACCTGGGAGCGGGAGCTGAGCCTACGGGGGAACAAAGCGTCGGTCTGGGAGGAACTCATTGGTAGAGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557627.1
CDS TCA 72 bp TCCCAGAGCCTCAGGAGGGCAACTTCGGAAGGTGCCTaGGGCATCAGCGTCACATGTCTTCCAGAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: SQSLRRATSEGA*GISVTCLPELS
Trigger: GCTCAGCTCTGGAAGACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCCCTCCTGAGGCTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
ENST00000557314.5
CDS GCA 72 bp CCCTTCGGTAGTGTCCGCCACACACTCAGCACTCCGTaGAGCTGGTCCACAGTCAAACCACTCCGTGTGACT +
Preference number: 6 (lower is better)
Translates to: PFGSVRHTLSTP*SWSTVKPLRVT
Trigger: AGTCACACGGAGTGGTTTGACTGTGGACCAGCTGCACGGAGTGCTGAGTGTGTGGCGGACACTACCGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
ENST00000557314.5
CDS GCA 72 bp GGTCTCCCAGAGCCTCAGGAGGGCAACTTCGGAAGGTaGCTGAGGCATCAGCGTCACATGTCTTCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: GLPEPQEGNFGR*LRHQRHMSSRA
Trigger: AGCTCTGGAAGACATGTGACGCTGATGCCTCAGGCACCTTCCGAAGTTGCCCTCCTGAGGCTCTGGGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
ENST00000557314.5
CDS CCA 72 bp CAGCCACCTGGATCCAGTCAGAAGGCAGCTGGACAATaGCACAGAAATATCGTCGCAGGTGGGGGCGACACG +
Preference number: 6 (lower is better)
Translates to: QPPGSSQKAAGQ*HRNIVAGGGDT
Trigger: CGTGTCGCCCCCACCTGCGACGATATTTCTGTGCCATTGTCCAGCTGCCTTCTGACTGGATCCAGGTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CCA 72 bp GCTGGTACTCGTCAAACTGGGCAAATTTGTCCGTCATaGCAGTACGGAGACAGGCGGGCAGGGGCACCAGCT +
Preference number: 6 (lower is better)
Translates to: AGTRQTGQICPS*QYGDRRAGAPA
Trigger: AGCTGGTGCCCCTGCCCGCCTGTCTCCGTACTGCCATGACGGACAAATTTGCCCAGTTTGACGAGTACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CAA 90 bp CGAGGGTTGTACTTAGCCAGCTGGTACTCGTCAAACTGGGCAAATTaGTCCGTCATGGCAGTACGGAGACAGGCGGGCAGGGGCACCAGC +
Preference number: 6 (lower is better)
Translates to: RGLYLASWYSSNWAN*SVMAVRRQAGRGTS
Trigger: GCTGGTGCCCCTGCCCGCCTGTCTCCGTACTGCCATGACGGACAAATTTGCCCAGTTTGACGAGTACCAGCTGGCTAAGTACAACCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CAA 90 bp AAGGGAAGCTTCCCATTTTCAATGAGTTCCTCCCAGACCGACGCTTaGTTCCCCCGTAGGCTCAGCTCCCGCTCCCAGGTCTCTGGCCTA +
Preference number: 6 (lower is better)
Translates to: KGSFPFSMSSSQTDA*FPRRLSSRSQVSGL
Trigger: TAGGCCAGAGACCTGGGAGCGGGAGCTGAGCCTACGGGGGAACAAAGCGTCGGTCTGGGAGGAACTCATTGAAAATGGGAAGCTTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS TCA 72 bp GAACTGCATCACCTCCATCTCTGTCACAGAGCGCCCTaGAGGGTACTGCTGGGCCCAGTGGAAGTGTGGATG +
Preference number: 6 (lower is better)
Translates to: ELHHLHLCHRAP*RVLLGPVEVWM
Trigger: CATCCACACTTCCACTGGGCCCAGCAGTACCCTTCAGGGCGCTCTGTGACAGAGATGGAGGTGATGCAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp GCAGGTGGGGGCGACACGCCGGCAAGAAAGCAGCAATaGCCAAGATGTTATTGGCCACATTCCGGACGTTCA +
Preference number: 6 (lower is better)
Translates to: AGGGDTPARKQQ*PRCYWPHSGRS
Trigger: TGAACGTCCGGAATGTGGCCAATAACATCTTGGCCATTGCTGCTTTCTTGCCGGCGTGTCGCCCCCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CCA 72 bp AAACCACTCCGTGTGACTTCTAGGGCAGTCAAGGCCTaGGGAAGGACATCAGGCCCGTGCTCCTTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: KPLRVTSRAVKA*GRTSGPCSFSS
Trigger: ACTGGAGAAGGAGCACGGGCCTGATGTCCTTCCCCAGGCCTTGACTGCCCTAGAAGTCACACGGAGTGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 72 bp TCATGGTGGCGGGAACTGATTCCAACCCGCAGCAGGTaGCACAGGTTCCGAAGCATGGCCATGAAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: SWWRELIPTRSR*HRFRSMAMKGS
Trigger: GCTTCCCTTCATGGCCATGCTTCGGAACCTGTGCAACCTGCTGCGGGTTGGAATCAGTTCCCGCCACCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CAA 72 bp GCTGAGGAAGCTGGAATCCCGGAAGTAGATGAGAGCTaGGGCAGAGGGCTGCAGACGTTGGTTCCGGTTCAG +
Preference number: 6 (lower is better)
Translates to: AEEAGIPEVDES*GRGLQTLVPVQ
Trigger: CTGAACCGGAACCAACGTCTGCAGCCCTCTGCCCAAGCTCTCATCTACTTCCGGGATTCCAGCTTCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 90 bp TGGCACAGAGCTGAGGAAGCTGGAATCCCGGAAGTAGATGAGAGCTaGGGCAGAGGGCTGCAGACGTTGGTTCCGGTTCAGGAACTGCAT +
Preference number: 6 (lower is better)
Translates to: WHRAEEAGIPEVDES*GRGLQTLVPVQELH
Trigger: ATGCAGTTCCTGAACCGGAACCAACGTCTGCAGCCCTCTGCCCAAGCTCTCATCTACTTCCGGGATTCCAGCTTCCTCAGCTCTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS TCA 72 bp CAGGTCCCGCTCCCCATGCATGTCTCGGAAAGTGGATaGAATGAAAAGCCGGATGCTGCGCCATCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: QVPLPMHVSESG*NEKPDAAPSLL
Trigger: CAGCAAGGATGGCGCAGCATCCGGCTTTTCATTTCATCCACTTTCCGAGACATGCATGGGGAGCGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 72 bp CTCCGCCCTCGTGATCATCATCCCAATCAACAGCAGTaGATAGTTCAGCGGGGGCCCTTGTGGGTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: LRPRDHHPNQQQ*IVQRGPLWVAL
Trigger: AAGAGCAACCCACAAGGGCCCCCGCTGAACTATGCACTGCTGTTGATTGGGATGATGATCACGAGGGCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp TTCGCATGCTGGAGTCTCTGGAGAATGAGCTCATGGTaGCGGGAACTGATTCCAACCCGCAGCAGGTTGCAC +
Preference number: 6 (lower is better)
Translates to: FACWSLWRMSSW*RELIPTRSRLH
Trigger: GTGCAACCTGCTGCGGGTTGGAATCAGTTCCCGCCACCATGAGCTCATTCTCCAGAGACTCCAGCATGCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CAA 90 bp TGGGGGCGACACGCCGGCAAGAAAGCAGCAATGGCCAAGATGTTATaGGCCACATTCCGGACGTTCAGCTGCTGCCTGGCATACAAAGAT +
Preference number: 6 (lower is better)
Translates to: WGRHAGKKAAMAKML*ATFRTFSCCLAYKD
Trigger: ATCTTTGTATGCCAGGCAGCAGCTGAACGTCCGGAATGTGGCCAATAACATCTTGGCCATTGCTGCTTTCTTGCCGGCGTGTCGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS TCA 72 bp CTCCACACAGCACGACGTCCACCTGCTCCGCCCTCGTaGTCATCATCCCAATCAACAGCAGTGCATAGTTCA +
Preference number: 6 (lower is better)
Translates to: LHTARRPPAPPS*SSSQSTAVHSS
Trigger: TGAACTATGCACTGCTGTTGATTGGGATGATGATCACGAGGGCGGAGCAGGTGGACGTCGTGCTGTGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS TCA 72 bp CCCGCTCCCCATGCATGTCTCGGAAAGTGGATGAAATaGAAAGCCGGATGCTGCGCCATCCTTGCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: PAPHACLGKWMK*KAGCCAILAGK
Trigger: TTTCCCAGCAAGGATGGCGCAGCATCCGGCTTTTCATTTCATCCACTTTCCGAGACATGCATGGGGAGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp ACGCCGGCAAGAAAGCAGCAATGGCCAAGATGTTATTaGCCACATTCCGGACGTTCAGCTGCTGCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: TPARKQQWPRCY*PHSGRSAAAWH
Trigger: ATGCCAGGCAGCAGCTGAACGTCCGGAATGTGGCCAATAACATCTTGGCCATTGCTGCTTTCTTGCCGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CCA 72 bp CGACTGTGGATCACCGACTTCGCATGCTGGAGTCTCTaGAGAATGAGCTCATGGTGGCGGGAACTGATTCCA +
Preference number: 6 (lower is better)
Translates to: RLWITDFACWSL*RMSSWWRELIP
Trigger: TGGAATCAGTTCCCGCCACCATGAGCTCATTCTCCAGAGACTCCAGCATGCGAAGTCGGTGATCCACAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp ATTAGCATCTGTCAGATAGACCAAGACAGTGCGGCCTaGCAGCAGGGGCAGGCTGTGCTTCACAGAGAGGTT +
Preference number: 6 (lower is better)
Translates to: ISICQIDQDSAA*QQGQAVLHREV
Trigger: AACCTCTCTGTGAAGCACAGCCTGCCCCTGCTGCCAGGCCGCACTGTCTTGGTCTATCTGACAGATGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 72 bp TACTTAGCCAGCTGGTACTCGTCAAACTGGGCAAATTaGTCCGTCATGGCAGTACGGAGACAGGCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: YLASWYSSNWAN*SVMAVRRQAGR
Trigger: CCTGCCCGCCTGTCTCCGTACTGCCATGACGGACAAATTTGCCCAGTTTGACGAGTACCAGCTGGCTAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000557627.1
CDS CAA 90 bp AGAATGAGCTCATGGTGGCGGGAACTGATTCCAACCCGCAGCAGGTaGCACAGGTTCCGAAGCATGGCCATGAAGGGAAGCTTCCCATTT +
Preference number: 6 (lower is better)
Translates to: RMSSWWRELIPTRSR*HRFRSMAMKGSFPF
Trigger: AAATGGGAAGCTTCCCTTCATGGCCATGCTTCGGAACCTGTGCAACCTGCTGCGGGTTGGAATCAGTTCCCGCCACCATGAGCTCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS TCA 72 bp GGGCAGGTTGAAAGGTCTAGTCCCTTAGAGAAATGCTaGGCCCTCCAACTTGGAGGCTCAGAGAGCAGGCAA +
Preference number: 6 (lower is better)
Translates to: GQVERSSPLEKC*ALQLGGSESRQ
Trigger: TTGCCTGCTCTCTGAGCCTCCAAGTTGGAGGGCTCAGCATTTCTCTAAGGGACTAGACCTTTCAACCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS TCA 72 bp TACAACACAGGTATCCTCATTGCCATCCGAAGCTGCTaGCGGCTTAGGTGGCAAAGAAACCTCCGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: YNTGILIAIRSC*RLRWQRNLRLG
Trigger: TCCCAGGCGGAGGTTTCTTTGCCACCTAAGCCGTCAGCAGCTTCGGATGGCAATGAGGATACCTGTGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS GCA 72 bp GGGCCCTTGTGGGTTGCTCTTTGGACAGAGCCTGTCTaGATTAGCATCTGTCAGATAGACCAAGACAGTGCG +
Preference number: 6 (lower is better)
Translates to: GPLWVALWTEPV*ISICQIDQDSA
Trigger: CGCACTGTCTTGGTCTATCTGACAGATGCTAATGCAGACAGGCTCTGTCCAAAGAGCAACCCACAAGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 72 bp CGGGGAAGCTTCTTTGGGATCCAGTCTGAAATCAGCTaGCCATTCTGGTCCACTAACCTATCAGCCCCATCG +
Preference number: 6 (lower is better)
Translates to: RGSFFGIQSEIS*PFWSTNLSAPS
Trigger: CGATGGGGCTGATAGGTTAGTGGACCAGAATGGGCAGCTGATTTCAGACTGGATCCCAAAGAAGCTTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp TTGGCCCGGTGCTTCCGAGGGTTGTACTTAGCCAGCTaGTACTCGTCAAACTGGGCAAATTTGTCCGTCATG +
Preference number: 6 (lower is better)
Translates to: LARCFRGLYLAS*YSSNWANLSVM
Trigger: CATGACGGACAAATTTGCCCAGTTTGACGAGTACCAGCTGGCTAAGTACAACCCTCGGAAGCACCGGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000557627.1
CDS CAA 72 bp CACTCAGCACCAGGTGTACACACCGGGGAAGCTTCTTaGGGATCCAGTCTGAAATCAGCTGCCCATTCTGGT +
Preference number: 6 (lower is better)
Translates to: HSAPGVHTGEAS*GSSLKSAAHSG
Trigger: ACCAGAATGGGCAGCTGATTTCAGACTGGATCCCAAAGAAGCTTCCCCGGTGTGTACACCTGGTGCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS GCA 72 bp GAGCCCTCCAACTTGGAGGCTCAGAGAGCAGGCAATTaGTGTTGTTCACACGGTACAAATCAGCTTGCGTCA +
Preference number: 6 (lower is better)
Translates to: EPSNLEAQRAGN*CCSHGTNQLAS
Trigger: TGACGCAAGCTGATTTGTACCGTGTGAACAACAGCAATTGCCTGCTCTCTGAGCCTCCAAGTTGGAGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556549.1
ENST00000556935.5
CDS GCA 72 bp CTGGAGCTTGATGGCAGTCTTCAGGATGCCTTCTTCTaGCTTAAGCACTGCAGTCTTCAGAGTGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: LELDGSLQDAFF*LKHCSLQSVTS
Trigger: GGAGGTGACACTCTGAAGACTGCAGTGCTTAAGGCAGAAGAAGGCATCCTGAAGACTGCCATCAAGCTCCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp CGAGGGTTGTACTTAGCCAGCTGGTACTCGTCAAACTaGGCAAATTTGTCCGTCATGGCAGTACGGAGACAG +
Preference number: 6 (lower is better)
Translates to: RGLYLASWYSSN*ANLSVMAVRRQ
Trigger: CTGTCTCCGTACTGCCATGACGGACAAATTTGCCCAGTTTGACGAGTACCAGCTGGCTAAGTACAACCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000557627.1
CDS CCA 72 bp TGCATAGTTCAGCGGGGGCCCTTGTGGGTTGCTCTTTaGACAGAGCCTGTCTGCATTAGCATCTGTCAGATA +
Preference number: 6 (lower is better)
Translates to: CIVQRGPLWVAL*TEPVCISICQI
Trigger: TATCTGACAGATGCTAATGCAGACAGGCTCTGTCCAAAGAGCAACCCACAAGGGCCCCCGCTGAACTATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 90 bp AGCACATGGAGGGCTTTCTACGCTGCCGTGTCTTTAGATGTGGTGTaGGCTCACTATCCATGCTGGCATCACTATCCATGCTGGCATCAG +
Preference number: 6 (lower is better)
Translates to: STWRAFYAAVSLDVV*AHYPCWHHYPCWHQ
Trigger: CTGATGCCAGCATGGATAGTGATGCCAGCATGGATAGTGAGCCAACACCACATCTAAAGACACGGCAGCGTAGAAAGCCCTCCATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS CAA 90 bp TTCTGCCACATGTTACCTGTGGTCCATTCTCCTTCTGGGCTGCATTaGGCCAGGTTCCATAGGATCCCATCAGAGCAGATTCAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: FCHMLPVVHSPSGLH*ARFHRIPSEQIQVW
Trigger: CCAAACCTGAATCTGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACCACAGGTAACATGTGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS CCA 72 bp TGGGCGTTAAGAAATCTGAATGGAAACTGCCGACTGTaGATCACCGACTTCGCATGCTGGAGTCTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: WALRNLNGNCRL*ITDFACWSLWR
Trigger: TCTCCAGAGACTCCAGCATGCGAAGTCGGTGATCCACAGTCGGCAGTTTCCATTCAGATTTCTTAACGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp TGTTACCTGTGGTCCATTCTCCTTCTGGGCTGCATTTaGCCAGGTTCCATAGGATCCCATCAGAGCAGATTC +
Preference number: 6 (lower is better)
Translates to: CYLWSILLLGCI*PGSIGSHQSRF
Trigger: GAATCTGCTCTGATGGGATCCTATGGAACCTGGCCAAATGCAGCCCAGAAGGAGAATGGACCACAGGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553365.5
CDS CAA 72 bp AGGGCTTTCTACGCTGCCGTGTCTTTAGATGTGGTGTaGGCTCACTATCCATGCTGGCATCACTATCCATGC +
Preference number: 6 (lower is better)
Translates to: RAFYAAVSLDVV*AHYPCWHHYPC
Trigger: GCATGGATAGTGATGCCAGCATGGATAGTGAGCCAACACCACATCTAAAGACACGGCAGCGTAGAAAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555008.5
CDS GCA 72 bp GCCAAGATGTTATTGGCCACATTCCGGACGTTCAGCTaGTGCCTGGCATACAAAGATGCCTTGAGGATAAAC +
Preference number: 6 (lower is better)
Translates to: AKMLLATFRTFS*CLAYKDALRIN
Trigger: GTTTATCCTCAAGGCATCTTTGTATGCCAGGCAGCAGCTGAACGTCCGGAATGTGGCCAATAACATCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS GCA 72 bp ATGGCATCATGGGCGTTAAGAAATCTGAATGGAAACTaGCGACTGTGGATCACCGACTTCGCATGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: MASWALRNLNGN*RLWITDFACWS
Trigger: ACTCCAGCATGCGAAGTCGGTGATCCACAGTCGGCAGTTTCCATTCAGATTTCTTAACGCCCATGATGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS GCA 72 bp ATTTGGCCCACATGTTCCAGAAGATGGGAGGCCCCATaGTCTGCAATGAACTTCAGTATCGCATCAGTACAG +
Preference number: 6 (lower is better)
Translates to: IWPTCSRRWEAP*SAMNFSIASVQ
Trigger: CTGTACTGATGCGATACTGAAGTTCATTGCAGAGCATGGGGCCTCCCATCTTCTGGAACATGTGGGCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp GGCATCAATGGCATCATGGGCGTTAAGAAATCTGAATaGAAACTGCCGACTGTGGATCACCGACTTCGCATG +
Preference number: 6 (lower is better)
Translates to: GINGIMGVKKSE*KLPTVDHRLRM
Trigger: CATGCGAAGTCGGTGATCCACAGTCGGCAGTTTCCATTCAGATTTCTTAACGCCCATGATGCCATTGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp TTCTTTGGGATCCAGTCTGAAATCAGCTGCCCATTCTaGTCCACTAACCTATCAGCCCCATCGATGATCAGG +
Preference number: 6 (lower is better)
Translates to: FFGIQSEISCPF*STNLSAPSMIR
Trigger: CCTGATCATCGATGGGGCTGATAGGTTAGTGGACCAGAATGGGCAGCTGATTTCAGACTGGATCCCAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS TCA 72 bp CTGTTGTTCACACGGTACAAATCAGCTTGCGTCATGTaGGATATCTGTAGACTCTGGAACAAGGGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: LLFTRYKSACVM*DICRLWNKGLA
Trigger: TGCCAGCCCCTTGTTCCAGAGTCTACAGATATCTCACATGACGCAAGCTGATTTGTACCGTGTGAACAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556549.1
ENST00000556935.5
CDS CCA 72 bp GTACCCTTCTTAGGAGGATACCAACAAAGAGGCACTTaGAATTCACACGCTGCCAGTAAAGCTGTTTGGCCA +
Preference number: 6 (lower is better)
Translates to: VPFLGGYQQRGT*NSHAASKAVWP
Trigger: TGGCCAAACAGCTTTACTGGCAGCGTGTGAATTCCAAGTGCCTCTTTGTTGGTATCCTCCTAAGAAGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 72 bp CCTGTCTTTCCTGGGGGTGGTGGAATCTTGAATATTTaGTCCATTTGGCCCACATGTTCCAGAAGATGGGAG +
Preference number: 6 (lower is better)
Translates to: PVFPGGGGILNI*SIWPTCSRRWE
Trigger: CTCCCATCTTCTGGAACATGTGGGCCAAATGGACAAAATATTCAAGATTCCACCACCCCCAGGAAAGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 90 bp TCACGACAGATTTCAAAAATGGCAGCCAGGGTGGGGTCAGATGTATaGTTCATGTTTACTTCTGAGACCAGAGTAGAGCACAGCAAGCTC +
Preference number: 6 (lower is better)
Translates to: SRQISKMAARVGSDV*FMFTSETRVEHSKL
Trigger: GAGCTTGCTGTGCTCTACTCTGGTCTCAGAAGTAAACATGAACAATACATCTGACCCCACCCTGGCTGCCATTTTTGAAATCTGTCGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS TCA 72 bp TGTGGATGTGCAGTCGCTGAACCAGCTTCTTCAGGGTaGACCTTGGAGGATTCTTTTTCTCTGACACTGTAT +
Preference number: 6 (lower is better)
Translates to: CGCAVAEPASSG*TLEDSFSLTLY
Trigger: ATACAGTGTCAGAGAAAAAGAATCCTCCAAGGTTCACCCTGAAGAAGCTGGTTCAGCGACTGCACATCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
ENST00000557627.1
CDS GCA 72 bp AAGATGTTATTGGCCACATTCCGGACGTTCAGCTGCTaGCTGGCATACAAAGATGCCTTGAGGATAAACTCA +
Preference number: 6 (lower is better)
Translates to: KMLLATFRTFSC*LAYKDALRINS
Trigger: TGAGTTTATCCTCAAGGCATCTTTGTATGCCAGGCAGCAGCTGAACGTCCGGAATGTGGCCAATAACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262715.10
ENST00000555727.5
CDS CCA 72 bp AATATTTTGTCCATTTGGCCCACATGTTCCAGAAGATaGGAGGCCCCATGCTCTGCAATGAACTTCAGTATC +
Preference number: 6 (lower is better)
Translates to: NILSIWPTCSRR*EAPCSAMNFSI
Trigger: GATACTGAAGTTCATTGCAGAGCATGGGGCCTCCCATCTTCTGGAACATGTGGGCCAAATGGACAAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp GTATCGCATCAGTACAGCCTGAGAGTGTCACATCATTaGGATTCAAATCTGTTGACAGGTATTGTACCCTTC +
Preference number: 6 (lower is better)
Translates to: VSHQYSLRVSHH*DSNLLTGIVPF
Trigger: GAAGGGTACAATACCTGTCAACAGATTTGAATCCCAATGATGTGACACTCTCAGGCTGTACTGATGCGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262715.10
ENST00000555008.5
ENST00000555727.5
ENST00000556935.5
CDS CAA 72 bp ATTTCAAAAATGGCAGCCAGGGTGGGGTCAGATGTATaGTTCATGTTTACTTCTGAGACCAGAGTAGAGCAC +
Preference number: 6 (lower is better)
Translates to: ISKMAARVGSDV*FMFTSETRVEH
Trigger: GTGCTCTACTCTGGTCTCAGAAGTAAACATGAACAATACATCTGACCCCACCCTGGCTGCCATTTTTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS CCA 72 bp CAAGTTCACGACAGATTTCAAAAATGGCAGCCAGGGTaGGGTCAGATGTATTGTTCATGTTTACTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: QVHDRFQKWQPG*GQMYCSCLLLR
Trigger: TCTCAGAAGTAAACATGAACAATACATCTGACCCCACCCTGGCTGCCATTTTTGAAATCTGTCGTGAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262715.10
ENST00000555727.5
ENST00000556935.5
CDS TCA 72 bp TGTACATCACCTAACTACATCTGGTATAATGATCTATaGTGCCAACATTACTCAAAGCAGGTACCACTGTTT +
Preference number: 6 (lower is better)
Translates to: CTSPNYIWYNDL*CQHYSKQVPLF
Trigger: AAACAGTGGTACCTGCTTTGAGTAATGTTGGCATCATAGATCATTATACCAGATGTAGTTAGGTGATGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557627.1